Query psy14331
Match_columns 265
No_of_seqs 157 out of 1436
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 17:07:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14331hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 100.0 3.4E-37 1.2E-41 254.2 19.7 213 24-263 66-282 (315)
2 3ii7_A Kelch-like protein 7; p 100.0 1.5E-36 5.1E-41 249.3 23.4 204 24-263 23-230 (306)
3 2woz_A Kelch repeat and BTB do 100.0 1.1E-36 3.9E-41 251.4 22.0 210 26-263 79-292 (318)
4 2xn4_A Kelch-like protein 2; s 100.0 7.8E-37 2.7E-41 250.5 20.4 204 22-263 74-281 (302)
5 1zgk_A Kelch-like ECH-associat 100.0 1E-36 3.6E-41 250.6 20.8 202 22-263 87-292 (308)
6 3ii7_A Kelch-like protein 7; p 100.0 1.2E-36 4E-41 249.9 20.8 208 21-263 66-277 (306)
7 1zgk_A Kelch-like ECH-associat 100.0 2.8E-36 9.7E-41 248.0 21.9 205 23-263 37-245 (308)
8 2xn4_A Kelch-like protein 2; s 100.0 3.6E-36 1.2E-40 246.6 21.0 203 23-263 28-234 (302)
9 4asc_A Kelch repeat and BTB do 100.0 1.1E-35 3.7E-40 245.2 22.6 208 25-263 13-226 (315)
10 2vpj_A Kelch-like protein 12; 100.0 7.5E-36 2.6E-40 244.5 20.0 202 22-263 75-283 (301)
11 2vpj_A Kelch-like protein 12; 100.0 1.5E-35 5.2E-40 242.7 21.4 202 22-263 28-236 (301)
12 2woz_A Kelch repeat and BTB do 100.0 7.5E-35 2.6E-39 240.5 20.4 205 27-263 26-236 (318)
13 2uvk_A YJHT; unknown function, 100.0 4.8E-33 1.6E-37 233.2 16.1 219 22-263 83-347 (357)
14 2uvk_A YJHT; unknown function, 100.0 4.8E-32 1.6E-36 227.1 21.2 221 25-263 31-299 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 4.4E-32 1.5E-36 245.0 17.3 212 22-262 409-639 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 7.9E-28 2.7E-32 217.3 20.8 186 41-261 382-580 (695)
17 1k3i_A Galactose oxidase precu 99.9 7.7E-25 2.6E-29 197.2 16.6 212 25-263 219-502 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.2E-23 4.2E-28 189.3 18.2 193 26-234 266-531 (656)
19 3mbr_X Glutamine cyclotransfer 96.9 0.047 1.6E-06 42.3 14.3 110 50-201 23-136 (243)
20 3dsm_A Uncharacterized protein 96.8 0.13 4.4E-06 41.6 17.3 165 26-232 18-190 (328)
21 3mbr_X Glutamine cyclotransfer 96.7 0.12 4.1E-06 40.0 15.0 92 114-232 30-122 (243)
22 3nok_A Glutaminyl cyclase; bet 96.5 0.049 1.7E-06 42.8 11.8 105 51-201 58-167 (268)
23 3vgz_A Uncharacterized protein 96.1 0.39 1.3E-05 38.5 17.3 166 26-232 112-291 (353)
24 3nol_A Glutamine cyclotransfer 96.1 0.27 9.4E-06 38.4 13.9 98 106-232 46-144 (262)
25 3nol_A Glutamine cyclotransfer 96.0 0.39 1.3E-05 37.6 14.9 135 26-201 66-204 (262)
26 3dsm_A Uncharacterized protein 96.0 0.49 1.7E-05 38.1 18.0 169 26-232 65-244 (328)
27 3q7m_A Lipoprotein YFGL, BAMB; 95.9 0.56 1.9E-05 38.3 19.3 109 52-206 48-172 (376)
28 3vgz_A Uncharacterized protein 95.7 0.62 2.1E-05 37.3 17.1 160 27-233 166-334 (353)
29 1l0q_A Surface layer protein; 95.7 0.16 5.5E-06 41.6 11.9 138 27-206 14-155 (391)
30 3nok_A Glutaminyl cyclase; bet 95.4 0.4 1.4E-05 37.6 12.5 89 114-232 64-153 (268)
31 1l0q_A Surface layer protein; 94.9 0.34 1.2E-05 39.6 11.5 137 26-204 55-195 (391)
32 1ri6_A Putative isomerase YBHE 94.8 1.2 4.1E-05 35.2 16.4 122 50-206 131-272 (343)
33 2iwa_A Glutamine cyclotransfer 94.5 1.3 4.5E-05 34.7 13.5 93 114-232 31-124 (266)
34 2iwa_A Glutamine cyclotransfer 94.5 1.3 4.5E-05 34.7 16.7 112 50-201 23-138 (266)
35 3q7m_A Lipoprotein YFGL, BAMB; 94.4 1.7 5.9E-05 35.3 18.1 62 114-204 239-304 (376)
36 2hqs_A Protein TOLB; TOLB, PAL 94.3 1.3 4.6E-05 36.8 13.9 165 26-233 204-373 (415)
37 3ju4_A Endo-N-acetylneuraminid 93.9 2.4 8.2E-05 35.3 14.7 117 113-235 347-483 (670)
38 1pex_A Collagenase-3, MMP-13; 93.6 1.7 5.9E-05 32.6 12.8 64 113-202 126-196 (207)
39 3bws_A Protein LP49; two-domai 93.5 1.5 5.2E-05 36.2 12.7 142 27-202 193-338 (433)
40 1ri6_A Putative isomerase YBHE 93.3 2.4 8.4E-05 33.4 13.8 74 110-203 136-216 (343)
41 1gxr_A ESG1, transducin-like e 93.3 2.4 8.2E-05 33.3 14.5 92 114-234 194-286 (337)
42 3hfq_A Uncharacterized protein 93.2 1.4 4.8E-05 35.3 11.9 145 27-205 20-179 (347)
43 1qhu_A Protein (hemopexin); be 93.2 0.72 2.4E-05 39.3 10.2 60 113-198 268-331 (460)
44 3hfq_A Uncharacterized protein 92.9 3 0.0001 33.3 14.8 41 26-66 64-104 (347)
45 1qks_A Cytochrome CD1 nitrite 92.9 1.3 4.4E-05 38.9 11.7 93 26-148 178-278 (567)
46 3no2_A Uncharacterized protein 92.7 2.9 9.8E-05 32.7 15.6 79 136-231 146-230 (276)
47 3scy_A Hypothetical bacterial 92.7 3.3 0.00011 33.3 15.4 81 108-207 216-302 (361)
48 3u4y_A Uncharacterized protein 92.7 3 0.0001 32.9 14.7 137 27-206 110-260 (331)
49 3jrp_A Fusion protein of prote 92.6 2.6 8.9E-05 33.7 12.7 64 114-199 171-241 (379)
50 1pex_A Collagenase-3, MMP-13; 92.6 2.5 8.5E-05 31.7 15.1 94 114-234 79-184 (207)
51 2ojh_A Uncharacterized protein 92.6 2.7 9.3E-05 32.1 14.8 148 26-206 63-214 (297)
52 3jrp_A Fusion protein of prote 92.1 2.2 7.6E-05 34.2 11.7 55 170-235 172-231 (379)
53 3fm0_A Protein CIAO1; WDR39,SG 92.1 3.7 0.00013 32.9 13.0 97 114-234 116-215 (345)
54 3bws_A Protein LP49; two-domai 91.8 4.6 0.00016 33.2 13.5 68 114-201 133-203 (433)
55 1gxr_A ESG1, transducin-like e 91.5 4.1 0.00014 31.9 13.2 96 114-234 108-204 (337)
56 1k8k_C P40, ARP2/3 complex 41 91.1 5 0.00017 32.0 16.1 39 27-67 32-71 (372)
57 1gen_A Gelatinase A; hydrolase 90.6 4.3 0.00015 30.7 11.0 101 57-200 85-204 (218)
58 1k8k_C P40, ARP2/3 complex 41 90.2 6 0.00021 31.5 15.7 24 169-201 213-236 (372)
59 3c7x_A Matrix metalloproteinas 89.9 4.7 0.00016 29.9 13.3 94 113-233 60-166 (196)
60 1nir_A Nitrite reductase; hemo 89.7 9.5 0.00032 33.1 14.3 93 27-149 161-261 (543)
61 3v9f_A Two-component system se 89.7 4.9 0.00017 36.5 12.5 81 139-231 562-645 (781)
62 4a2l_A BT_4663, two-component 89.2 13 0.00043 33.9 15.5 94 113-231 552-648 (795)
63 3no2_A Uncharacterized protein 89.1 6.7 0.00023 30.5 13.9 158 27-234 17-185 (276)
64 1jmx_B Amine dehydrogenase; ox 89.0 3.5 0.00012 32.6 10.1 67 58-150 9-79 (349)
65 4aez_A CDC20, WD repeat-contai 89.0 8.3 0.00028 31.5 14.1 105 107-235 264-371 (401)
66 3ba0_A Macrophage metalloelast 88.7 8.9 0.00031 31.5 12.9 94 114-233 236-341 (365)
67 1itv_A MMP9; adaptive molecula 88.6 6 0.0002 29.3 11.4 65 112-202 107-178 (195)
68 3v9f_A Two-component system se 88.5 14 0.00048 33.5 17.8 82 137-231 516-600 (781)
69 3u4y_A Uncharacterized protein 88.3 7.9 0.00027 30.4 12.3 131 58-232 8-147 (331)
70 2dg1_A DRP35, lactonase; beta 88.2 8.2 0.00028 30.4 13.4 97 114-231 55-152 (333)
71 4e54_B DNA damage-binding prot 87.9 11 0.00036 31.3 13.0 66 114-200 176-242 (435)
72 1kv9_A Type II quinohemoprotei 87.8 15 0.0005 32.8 16.4 114 58-205 65-196 (668)
73 4ery_A WD repeat-containing pr 87.2 9.1 0.00031 29.8 15.1 94 114-233 203-299 (312)
74 3dwl_C Actin-related protein 2 86.9 4.4 0.00015 32.6 9.5 39 27-67 35-74 (377)
75 2xbg_A YCF48-like protein; pho 86.7 11 0.00037 30.1 17.1 151 33-231 64-222 (327)
76 2hqs_A Protein TOLB; TOLB, PAL 86.6 12 0.00043 30.8 13.6 59 136-205 247-307 (415)
77 3ba0_A Macrophage metalloelast 86.6 12 0.00041 30.7 12.6 67 113-203 283-355 (365)
78 2aq5_A Coronin-1A; WD40 repeat 86.5 12 0.0004 30.5 12.0 70 114-200 187-256 (402)
79 2z2n_A Virginiamycin B lyase; 86.2 9.7 0.00033 29.2 16.4 91 114-231 109-200 (299)
80 1nir_A Nitrite reductase; hemo 86.1 16 0.00055 31.6 13.5 86 135-232 301-389 (543)
81 1itv_A MMP9; adaptive molecula 86.0 8.6 0.00029 28.4 14.5 94 114-234 64-166 (195)
82 1yiq_A Quinohemoprotein alcoho 85.9 19 0.00065 32.3 17.3 114 58-205 69-201 (689)
83 3scy_A Hypothetical bacterial 85.9 9.6 0.00033 30.5 11.0 123 51-206 214-347 (361)
84 2pm9_A Protein WEB1, protein t 85.8 11 0.00039 30.4 11.6 99 27-148 190-297 (416)
85 4a11_B DNA excision repair pro 85.5 13 0.00044 29.9 11.7 28 108-146 192-219 (408)
86 2p9w_A MAL S 1 allergenic prot 85.5 13 0.00045 30.0 14.0 147 53-235 142-306 (334)
87 1flg_A Protein (quinoprotein e 85.5 18 0.00062 31.7 14.8 112 58-203 67-200 (582)
88 3mkq_A Coatomer beta'-subunit; 85.4 20 0.0007 32.2 14.5 96 114-235 152-250 (814)
89 2ojh_A Uncharacterized protein 85.1 11 0.00036 28.6 13.7 60 135-206 109-170 (297)
90 1kb0_A Quinohemoprotein alcoho 85.1 21 0.00071 31.9 17.0 115 58-206 76-209 (677)
91 1qhu_A Protein (hemopexin); be 84.9 10 0.00035 32.2 10.8 59 114-199 158-216 (460)
92 3k26_A Polycomb protein EED; W 84.5 8.2 0.00028 30.5 9.9 57 170-235 299-357 (366)
93 1q7f_A NHL, brain tumor CG1071 83.9 13 0.00043 28.5 17.0 95 114-233 131-226 (286)
94 3jro_A Fusion protein of prote 83.7 9.8 0.00034 34.4 11.0 55 170-235 170-229 (753)
95 1gen_A Gelatinase A; hydrolase 83.2 13 0.00043 28.0 15.0 96 113-234 86-194 (218)
96 1su3_A Interstitial collagenas 83.2 11 0.00039 31.9 10.4 66 113-204 366-438 (450)
97 1rwi_B Serine/threonine-protei 82.1 14 0.00049 27.8 14.4 90 114-231 77-167 (270)
98 2z3z_A Dipeptidyl aminopeptida 81.7 27 0.00094 30.8 15.0 64 136-205 235-301 (706)
99 4a2l_A BT_4663, two-component 81.6 30 0.001 31.3 15.2 93 113-231 507-603 (795)
100 3jro_A Fusion protein of prote 81.6 22 0.00077 32.0 12.5 99 115-235 170-276 (753)
101 3e5z_A Putative gluconolactona 81.4 13 0.00045 28.7 9.8 97 108-230 33-131 (296)
102 1rwi_B Serine/threonine-protei 81.0 16 0.00053 27.6 14.2 91 114-231 118-209 (270)
103 2pm9_A Protein WEB1, protein t 80.9 11 0.00037 30.6 9.5 105 108-235 220-328 (416)
104 2xbg_A YCF48-like protein; pho 80.8 20 0.00067 28.6 16.3 158 27-231 17-180 (327)
105 3c7x_A Matrix metalloproteinas 80.7 15 0.00051 27.1 10.8 62 113-200 108-177 (196)
106 3ott_A Two-component system se 80.7 32 0.0011 31.0 14.6 68 113-205 526-593 (758)
107 3hrp_A Uncharacterized protein 80.6 23 0.00079 29.3 17.8 135 26-199 153-299 (409)
108 1kb0_A Quinohemoprotein alcoho 80.3 32 0.0011 30.7 13.9 70 114-205 77-156 (677)
109 4ery_A WD repeat-containing pr 80.3 18 0.00063 28.0 14.1 98 114-235 160-259 (312)
110 2aq5_A Coronin-1A; WD40 repeat 80.1 18 0.00061 29.4 10.6 73 114-206 231-309 (402)
111 3fvz_A Peptidyl-glycine alpha- 79.6 21 0.00072 28.2 20.4 112 107-233 200-311 (329)
112 3dwl_C Actin-related protein 2 79.5 11 0.00037 30.2 8.9 127 84-234 33-167 (377)
113 2vdu_B TRNA (guanine-N(7)-)-me 79.1 26 0.00089 29.0 12.8 65 115-201 210-274 (450)
114 1pgu_A Actin interacting prote 79.0 27 0.00093 29.9 11.8 87 136-234 183-273 (615)
115 1pjx_A Dfpase, DIISOPROPYLFLUO 78.7 21 0.00071 27.6 14.4 108 27-151 48-167 (314)
116 2z2n_A Virginiamycin B lyase; 78.6 20 0.00067 27.3 16.4 89 114-231 193-283 (299)
117 1yiq_A Quinohemoprotein alcoho 78.6 37 0.0013 30.4 15.2 71 114-206 70-150 (689)
118 1r5m_A SIR4-interacting protei 78.1 25 0.00086 28.3 14.7 42 189-234 227-268 (425)
119 3oyo_A Hemopexin fold protein 77.4 21 0.00072 27.0 17.0 54 169-233 127-189 (225)
120 2qc5_A Streptogramin B lactona 77.2 22 0.00075 27.1 14.8 68 114-205 114-182 (300)
121 1jmx_B Amine dehydrogenase; ox 77.0 24 0.00083 27.5 10.8 68 114-203 10-79 (349)
122 2vdu_B TRNA (guanine-N(7)-)-me 77.0 30 0.001 28.6 12.3 52 170-234 210-261 (450)
123 3vl1_A 26S proteasome regulato 76.9 28 0.00096 28.2 12.9 122 84-235 78-203 (420)
124 3azo_A Aminopeptidase; POP fam 76.8 38 0.0013 29.6 14.1 61 136-206 217-282 (662)
125 1got_B GT-beta; complex (GTP-b 76.4 27 0.00091 27.7 12.0 84 136-235 164-248 (340)
126 2ecf_A Dipeptidyl peptidase IV 76.2 30 0.001 30.8 11.6 16 137-152 173-188 (741)
127 1kv9_A Type II quinohemoprotei 76.0 43 0.0015 29.8 13.6 70 114-205 66-145 (668)
128 1q7f_A NHL, brain tumor CG1071 75.2 25 0.00086 26.8 17.4 95 113-232 87-182 (286)
129 3ei3_B DNA damage-binding prot 75.1 30 0.001 27.6 13.6 71 114-205 130-201 (383)
130 2ynn_A Coatomer subunit beta'; 74.1 23 0.0008 27.4 9.3 65 114-202 197-263 (304)
131 1hxn_A Hemopexin, HPX; heme, b 74.1 21 0.00071 26.9 8.4 20 113-145 125-144 (219)
132 4g56_B MGC81050 protein; prote 74.0 9 0.00031 30.9 6.9 107 53-198 232-343 (357)
133 3mkq_A Coatomer beta'-subunit; 73.3 51 0.0018 29.5 14.6 54 136-200 119-174 (814)
134 4g56_B MGC81050 protein; prote 73.2 34 0.0012 27.4 11.0 65 114-200 193-260 (357)
135 4e54_B DNA damage-binding prot 72.9 38 0.0013 27.8 12.3 99 114-235 131-231 (435)
136 2qc5_A Streptogramin B lactona 72.6 29 0.00099 26.4 16.2 91 114-231 72-163 (300)
137 1r5m_A SIR4-interacting protei 71.7 37 0.0013 27.2 13.9 93 114-234 258-351 (425)
138 1su3_A Interstitial collagenas 71.5 46 0.0016 28.1 13.7 52 169-234 367-424 (450)
139 4h5i_A Guanine nucleotide-exch 71.4 38 0.0013 27.2 13.3 105 114-235 187-291 (365)
140 4aez_A CDC20, WD repeat-contai 70.5 41 0.0014 27.2 15.4 66 114-201 185-251 (401)
141 4gqb_B Methylosome protein 50; 70.1 40 0.0014 26.9 12.7 65 114-200 181-248 (344)
142 1ck7_A Protein (gelatinase A); 68.9 56 0.0019 29.0 11.0 53 169-234 548-607 (631)
143 3g4e_A Regucalcin; six bladed 68.6 39 0.0013 26.1 12.0 69 112-207 22-91 (297)
144 2ad6_A Methanol dehydrogenase 68.2 60 0.0021 28.2 14.0 70 114-204 62-142 (571)
145 4gga_A P55CDC, cell division c 68.0 18 0.00062 29.6 7.6 39 27-67 127-166 (420)
146 1pjx_A Dfpase, DIISOPROPYLFLUO 67.0 41 0.0014 25.8 12.6 86 136-232 46-135 (314)
147 3fm0_A Protein CIAO1; WDR39,SG 66.8 46 0.0016 26.3 14.0 97 114-234 72-171 (345)
148 2ecf_A Dipeptidyl peptidase IV 66.8 69 0.0024 28.4 13.3 65 137-206 264-329 (741)
149 4gqb_B Methylosome protein 50; 66.3 19 0.00064 28.9 7.2 25 114-149 269-293 (344)
150 3ei3_B DNA damage-binding prot 65.8 49 0.0017 26.3 14.6 61 114-198 174-236 (383)
151 3lp9_A LS-24; SEED albumin, pl 65.6 41 0.0014 25.4 9.6 62 113-199 128-202 (227)
152 3ott_A Two-component system se 64.7 72 0.0025 28.6 11.4 94 113-231 481-575 (758)
153 2mad_H Methylamine dehydrogena 63.5 18 0.00061 29.6 6.6 80 53-149 272-354 (373)
154 3zwl_B Eukaryotic translation 63.1 52 0.0018 25.7 13.2 103 114-235 229-337 (369)
155 1pgu_A Actin interacting prote 62.8 72 0.0025 27.2 12.4 66 115-202 219-287 (615)
156 3v7d_B Cell division control p 62.3 64 0.0022 26.5 16.0 66 114-203 361-426 (464)
157 1w6s_A Methanol dehydrogenase 61.9 74 0.0025 28.0 10.6 71 114-205 62-149 (599)
158 4a11_B DNA excision repair pro 61.8 59 0.002 25.8 14.2 63 114-200 111-177 (408)
159 3b7f_A Glycosyl hydrolase, BNR 60.9 66 0.0022 26.1 13.3 71 114-206 128-216 (394)
160 3mmy_A MRNA export factor; mRN 60.9 51 0.0017 25.7 8.9 54 169-235 284-337 (368)
161 3k26_A Polycomb protein EED; W 60.6 58 0.002 25.4 15.1 96 115-234 85-182 (366)
162 3e5z_A Putative gluconolactona 60.5 54 0.0019 25.0 12.6 129 49-205 29-168 (296)
163 2z3z_A Dipeptidyl aminopeptida 60.4 89 0.003 27.5 16.5 65 135-206 283-352 (706)
164 3zwl_B Eukaryotic translation 59.4 61 0.0021 25.2 16.6 81 136-234 197-280 (369)
165 1w6s_A Methanol dehydrogenase 58.7 95 0.0033 27.3 12.6 67 136-206 131-201 (599)
166 1ck7_A Protein (gelatinase A); 58.7 17 0.00059 32.2 5.9 21 113-146 547-567 (631)
167 2ovr_B FBW7, F-BOX/WD repeat p 58.6 74 0.0025 26.0 14.9 89 136-235 339-429 (445)
168 3o4h_A Acylamino-acid-releasin 58.4 24 0.00082 30.4 6.9 57 136-202 175-231 (582)
169 3azo_A Aminopeptidase; POP fam 58.4 93 0.0032 27.1 11.5 63 136-206 265-333 (662)
170 2xdw_A Prolyl endopeptidase; a 57.0 1.1E+02 0.0036 27.3 17.1 63 135-206 258-331 (710)
171 2xyi_A Probable histone-bindin 56.4 41 0.0014 27.6 7.7 27 108-145 283-309 (430)
172 3fvz_A Peptidyl-glycine alpha- 55.7 72 0.0025 25.0 16.9 78 107-203 147-232 (329)
173 3o4h_A Acylamino-acid-releasin 55.6 98 0.0034 26.5 10.7 59 138-206 134-192 (582)
174 1npe_A Nidogen, entactin; glyc 55.3 64 0.0022 24.3 16.9 139 50-231 81-225 (267)
175 2ovr_B FBW7, F-BOX/WD repeat p 54.2 88 0.003 25.5 14.7 94 114-235 288-382 (445)
176 1p22_A F-BOX/WD-repeat protein 54.2 88 0.003 25.5 14.3 63 114-200 182-244 (435)
177 3c5m_A Oligogalacturonate lyas 53.7 81 0.0028 25.0 14.9 66 136-206 264-337 (396)
178 3oyo_A Hemopexin fold protein 53.5 69 0.0024 24.1 11.0 61 113-197 126-197 (225)
179 1hxn_A Hemopexin, HPX; heme, b 53.5 68 0.0023 24.0 10.4 59 113-197 27-89 (219)
180 2ad6_A Methanol dehydrogenase 53.4 1.1E+02 0.0039 26.5 16.1 76 114-205 115-194 (571)
181 4d9s_A UVB-resistance protein 52.4 97 0.0033 25.4 12.0 18 215-232 286-303 (406)
182 3ow8_A WD repeat-containing pr 52.2 82 0.0028 24.6 15.9 95 114-235 175-270 (321)
183 1yr2_A Prolyl oligopeptidase; 51.8 1.3E+02 0.0045 26.8 16.2 74 113-204 326-401 (741)
184 2bkl_A Prolyl endopeptidase; m 51.5 1.3E+02 0.0044 26.6 14.6 84 135-232 251-337 (695)
185 1npe_A Nidogen, entactin; glyc 51.1 76 0.0026 23.8 17.1 119 51-204 39-161 (267)
186 1qks_A Cytochrome CD1 nitrite 50.7 1.3E+02 0.0043 26.2 15.4 69 135-214 319-390 (567)
187 1sq9_A Antiviral protein SKI8; 49.8 95 0.0032 24.6 10.3 24 114-148 302-325 (397)
188 1n7d_A LDL receptor, low-densi 49.8 1.4E+02 0.0049 26.7 11.5 98 108-231 501-601 (699)
189 3pe7_A Oligogalacturonate lyas 49.6 95 0.0033 24.6 13.9 114 137-262 265-388 (388)
190 1pby_B Quinohemoprotein amine 49.4 86 0.003 24.0 13.4 84 110-204 41-130 (337)
191 3pe7_A Oligogalacturonate lyas 48.7 99 0.0034 24.5 13.6 66 135-206 167-233 (388)
192 3g4e_A Regucalcin; six bladed 48.2 91 0.0031 23.9 13.3 115 52-198 17-139 (297)
193 3tc9_A Hypothetical hydrolase; 47.8 1.2E+02 0.0041 25.1 10.5 137 25-197 159-300 (430)
194 3ow8_A WD repeat-containing pr 47.6 98 0.0033 24.1 15.2 94 114-235 133-228 (321)
195 3v65_B Low-density lipoprotein 47.4 1.1E+02 0.0039 24.8 13.7 135 52-231 163-305 (386)
196 1a12_A RCC1, regulator of chro 46.1 1.1E+02 0.0039 25.0 8.8 19 215-233 346-364 (413)
197 2ghs_A AGR_C_1268P; regucalcin 46.1 1.1E+02 0.0036 24.0 13.2 70 110-206 56-126 (326)
198 3dr2_A Exported gluconolactona 45.5 1E+02 0.0035 23.7 12.3 91 113-230 55-147 (305)
199 4gga_A P55CDC, cell division c 44.3 1.3E+02 0.0043 24.4 13.7 84 136-235 301-386 (420)
200 3odt_A Protein DOA1; ubiquitin 43.6 1E+02 0.0035 23.2 16.5 81 136-234 205-286 (313)
201 3mmy_A MRNA export factor; mRN 42.9 1.1E+02 0.0039 23.6 10.0 95 115-235 54-151 (368)
202 2pm7_B Protein transport prote 42.8 87 0.003 23.9 7.3 28 170-206 67-94 (297)
203 3ju4_A Endo-N-acetylneuraminid 42.6 1.5E+02 0.0052 24.9 8.7 124 94-235 276-408 (670)
204 2ghs_A AGR_C_1268P; regucalcin 42.5 1.2E+02 0.0041 23.7 14.2 117 52-204 53-174 (326)
205 2xdw_A Prolyl endopeptidase; a 42.5 1.8E+02 0.0062 25.7 16.6 77 112-205 295-376 (710)
206 3bg1_A Protein SEC13 homolog; 42.3 1E+02 0.0034 23.9 7.6 71 114-206 24-98 (316)
207 4ggc_A P55CDC, cell division c 42.2 87 0.003 23.7 7.2 149 5-200 33-183 (318)
208 3iz6_a 40S ribosomal protein R 41.8 1.3E+02 0.0045 24.0 15.5 100 114-235 260-366 (380)
209 2dg1_A DRP35, lactonase; beta 41.8 1.1E+02 0.0039 23.5 8.0 50 169-231 55-104 (333)
210 3m0c_C LDL receptor, low-densi 41.6 2.1E+02 0.0071 26.2 17.8 136 52-231 475-619 (791)
211 1n7d_A LDL receptor, low-densi 41.1 1.7E+02 0.0057 26.2 9.6 73 107-200 544-616 (699)
212 2pbi_B Guanine nucleotide-bind 41.1 1.3E+02 0.0045 23.7 13.8 95 114-235 251-348 (354)
213 1flg_A Protein (quinoprotein e 40.8 1.8E+02 0.0062 25.3 13.8 70 114-205 68-145 (582)
214 2mad_H Methylamine dehydrogena 40.0 1.5E+02 0.005 24.0 12.2 56 169-230 278-335 (373)
215 1vyh_C Platelet-activating fac 40.0 1.5E+02 0.0051 24.0 13.6 64 114-201 203-268 (410)
216 2bkl_A Prolyl endopeptidase; m 39.8 2E+02 0.0068 25.4 12.7 61 135-204 294-357 (695)
217 2p4o_A Hypothetical protein; p 39.5 1.3E+02 0.0044 23.2 13.1 91 114-230 42-133 (306)
218 2cn3_A Xyloglucanase, beta-1,4 39.0 2.2E+02 0.0074 25.6 13.2 86 92-206 558-647 (737)
219 4h5i_A Guanine nucleotide-exch 38.5 1.5E+02 0.0051 23.6 14.3 103 114-235 230-334 (365)
220 3iuj_A Prolyl endopeptidase; h 38.1 2.1E+02 0.0073 25.3 14.2 74 113-205 290-366 (693)
221 1yr2_A Prolyl oligopeptidase; 37.5 2.2E+02 0.0076 25.3 14.5 63 135-206 293-360 (741)
222 2pbi_B Guanine nucleotide-bind 37.1 1.5E+02 0.0052 23.3 14.8 63 114-200 209-273 (354)
223 1vyh_C Platelet-activating fac 36.8 1.7E+02 0.0057 23.7 13.6 94 114-235 161-256 (410)
224 3sfz_A APAF-1, apoptotic pepti 36.0 2.9E+02 0.0099 26.2 14.5 93 114-234 668-764 (1249)
225 3sjl_D Methylamine dehydrogena 35.5 40 0.0014 27.8 4.3 81 53-150 285-368 (386)
226 3v64_C Agrin; beta propeller, 35.5 1.7E+02 0.0057 23.3 13.9 135 52-231 120-262 (349)
227 2hes_X YDR267CP; beta-propelle 34.7 1.6E+02 0.0055 22.8 11.9 57 169-235 260-319 (330)
228 4d9s_A UVB-resistance protein 34.7 1.9E+02 0.0064 23.6 11.0 18 215-232 338-355 (406)
229 2oiz_A Aromatic amine dehydrog 33.7 1E+02 0.0036 24.6 6.6 80 53-152 259-341 (361)
230 2hes_X YDR267CP; beta-propelle 33.1 1.7E+02 0.0058 22.7 12.6 30 114-154 164-193 (330)
231 3i2n_A WD repeat-containing pr 32.4 1.7E+02 0.0058 22.5 11.1 69 114-202 128-203 (357)
232 3b7f_A Glycosyl hydrolase, BNR 31.8 2E+02 0.0069 23.1 10.4 61 138-206 33-98 (394)
233 3vl1_A 26S proteasome regulato 31.7 2E+02 0.0067 22.9 18.0 23 169-200 258-280 (420)
234 3kci_A Probable E3 ubiquitin-p 31.3 2.1E+02 0.0071 23.2 8.0 19 215-233 326-344 (389)
235 3m0c_C LDL receptor, low-densi 31.3 3.1E+02 0.01 25.1 13.2 60 105-176 560-619 (791)
236 3iz6_a 40S ribosomal protein R 31.1 2E+02 0.0068 22.8 15.0 86 136-235 180-271 (380)
237 3sjl_D Methylamine dehydrogena 30.7 53 0.0018 27.1 4.3 103 26-148 60-172 (386)
238 1erj_A Transcriptional repress 30.7 2.1E+02 0.007 22.9 13.0 53 136-201 187-241 (393)
239 3hrp_A Uncharacterized protein 29.3 2.3E+02 0.008 23.1 18.7 142 51-231 134-285 (409)
240 2fp8_A Strictosidine synthase; 28.8 2E+02 0.0069 22.2 11.9 75 114-198 239-313 (322)
241 3of7_A Regulator of chromosome 27.5 85 0.0029 26.4 5.2 18 215-232 322-339 (473)
242 1pby_B Quinohemoprotein amine 27.1 2.1E+02 0.007 21.7 13.5 143 27-202 13-167 (337)
243 2ynn_A Coatomer subunit beta'; 26.3 2.2E+02 0.0074 21.7 14.1 53 169-235 197-250 (304)
244 3v7d_B Cell division control p 25.8 2.7E+02 0.0091 22.6 14.9 63 114-200 321-383 (464)
245 3a0f_A Xyloglucanase; beta-pro 25.8 2.5E+02 0.0086 25.3 8.2 96 34-153 618-725 (763)
246 3c75_H MADH, methylamine dehyd 25.5 62 0.0021 27.1 3.8 80 53-149 324-406 (426)
247 3sfz_A APAF-1, apoptotic pepti 25.0 4.5E+02 0.015 24.9 13.1 93 114-234 1014-1106(1249)
248 1ijq_A LDL receptor, low-densi 24.7 2.5E+02 0.0084 21.8 13.2 113 52-200 124-240 (316)
249 3p5b_L Low density lipoprotein 23.6 3E+02 0.01 22.4 15.5 99 107-231 206-307 (400)
250 1got_B GT-beta; complex (GTP-b 23.4 2.6E+02 0.0089 21.7 13.6 95 114-235 237-334 (340)
251 1sq9_A Antiviral protein SKI8; 23.0 2.7E+02 0.0094 21.8 17.2 59 136-200 207-269 (397)
252 1ijq_A LDL receptor, low-densi 22.6 2.7E+02 0.0093 21.6 18.7 138 51-231 80-225 (316)
253 3lrv_A PRE-mRNA-splicing facto 21.7 2.8E+02 0.0096 21.4 12.9 66 114-201 138-204 (343)
254 3lrv_A PRE-mRNA-splicing facto 21.1 2.9E+02 0.0099 21.3 16.3 55 169-235 138-192 (343)
255 3odt_A Protein DOA1; ubiquitin 21.0 2.6E+02 0.009 20.8 13.1 18 169-195 154-171 (313)
256 3p5b_L Low density lipoprotein 20.8 3.4E+02 0.012 22.0 13.1 73 106-199 249-321 (400)
257 2w8x_A ION-channel modulator r 20.8 57 0.0019 18.3 1.8 17 247-263 27-43 (72)
258 2hz6_A Endoplasmic reticulum t 20.4 1.1E+02 0.0038 24.6 4.3 59 58-149 8-74 (369)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=254.24 Aligned_cols=213 Identities=14% Similarity=0.257 Sum_probs=177.2
Q ss_pred HHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCC
Q psy14331 24 VRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAP 99 (265)
Q Consensus 24 ~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p 99 (265)
.++++.||+.+++|.. .+++|.+|.+|+++++ +++||++||....... ..++++++||+ |+..+++|
T Consensus 66 ~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~------~~~~~~~~~d~~~~~W~~~~~~p 136 (315)
T 4asc_A 66 SAYFLQFDHLDSEWLG-MPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGE------RCLDSVMCYDRLSFKWGESDPLP 136 (315)
T ss_dssp EEEEEEEETTTTEEEE-CCCBSSCEESCEEEEE--TTEEEEECCEESSTTC------CBCCCEEEEETTTTEEEECCCCS
T ss_pred ccceEEecCCCCeEEE-CCCCCcchhceeEEEE--CCEEEEEeCCcCCCCC------cccceEEEECCCCCcEeECCCCC
Confidence 3458999999999988 7889999999999987 9999999996432111 11799999999 99999999
Q ss_pred CCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCcc
Q psy14331 100 PPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFH 179 (265)
Q Consensus 100 ~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~ 179 (265)
.+|..|+++.+ +++||++||..... ..++++++||+.+++|+.++++ |.+|..|+++.++++||++||.+
T Consensus 137 ~~r~~~~~~~~---~~~iyv~GG~~~~~-----~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 137 YVVYGHTVLSH---MDLVYVIGGKGSDR-----KCLNKMCVYDPKKFEWKELAPM--QTARSLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp SCCBSCEEEEE---TTEEEEECCBCTTS-----CBCCCEEEEETTTTEEEECCCC--SSCCBSCEEEEETTEEEEEEEEC
T ss_pred CcccceeEEEE---CCEEEEEeCCCCCC-----cccceEEEEeCCCCeEEECCCC--CCchhceEEEEECCEEEEEeccC
Confidence 99999999987 89999999984332 3479999999999999999866 68999999999999999999986
Q ss_pred CCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCcc
Q psy14331 180 DNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDSK 259 (265)
Q Consensus 180 ~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~~ 259 (265)
.. ...+++++||+.+++|+.+.+ +|.+|..|+++.+ +++|||+||.+.....+........+++|+||++++
T Consensus 207 ~~----~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 207 DT----GLTSSAEVYSITDNKWAPFEA---FPQERSSLSLVSL-VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp SS----SEEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred CC----CccceEEEEECCCCeEEECCC---CCCcccceeEEEE-CCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 55 346899999999999999987 5889999998877 899999999864321111111245788999999999
Q ss_pred cccc
Q psy14331 260 TLRS 263 (265)
Q Consensus 260 ~w~~ 263 (265)
+|+.
T Consensus 279 ~W~~ 282 (315)
T 4asc_A 279 KWEG 282 (315)
T ss_dssp EEEE
T ss_pred hhhh
Confidence 9985
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=249.34 Aligned_cols=204 Identities=16% Similarity=0.222 Sum_probs=175.6
Q ss_pred HHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCC
Q psy14331 24 VRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAP 99 (265)
Q Consensus 24 ~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p 99 (265)
.++++.||+.+++|.. .+++|.+|.+|+++++ +++||++||.. ... ++++++||+ |...+++|
T Consensus 23 ~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~--~~~--------~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTD-IRCPFEKRRDAACVFW--DNVVYILGGSQ--LFP--------IKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp TTSEEEEETTTTEEEE-CCCCSCCCBSCEEEEE--TTEEEEECCBS--SSB--------CCEEEEEETTTTEEEEEECCS
T ss_pred CceEEEecCCCCCEec-CCCCCcccceeEEEEE--CCEEEEEeCCC--CCC--------cceEEEEeCCCCeEEECCCCC
Confidence 6789999999999998 7889999999999987 99999999953 211 799999999 99999999
Q ss_pred CCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCcc
Q psy14331 100 PPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFH 179 (265)
Q Consensus 100 ~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~ 179 (265)
.+|..|+++.+ +++||++||..... ...+++++||+.+++|+.++++ |.+|..|+++.++++||++||..
T Consensus 90 ~~r~~~~~~~~---~~~iyv~GG~~~~~-----~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 90 TPRDSLAACAA---EGKIYTSGGSEVGN-----SALYLFECYDTRTESWHTKPSM--LTQRCSHGMVEANGLIYVCGGSL 159 (306)
T ss_dssp SCCBSCEEEEE---TTEEEEECCBBTTB-----SCCCCEEEEETTTTEEEEECCC--SSCCBSCEEEEETTEEEEECCEE
T ss_pred ccccceeEEEE---CCEEEEECCCCCCC-----cEeeeEEEEeCCCCceEeCCCC--cCCcceeEEEEECCEEEEECCCC
Confidence 99999999988 89999999985322 3478999999999999999766 68999999999999999999987
Q ss_pred CCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCcc
Q psy14331 180 DNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDSK 259 (265)
Q Consensus 180 ~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~~ 259 (265)
.........+++++||+.+++|+.+.+ +|.+|..|+++.+ +++|||+||.+... ..+++|.||+.++
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~---------~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATETWTELCP---MIEARKNHGLVFV-KDKIFAVGGQNGLG---------GLDNVEYYDIKLN 226 (306)
T ss_dssp SCTTTCEECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCEETTE---------EBCCEEEEETTTT
T ss_pred CCCCcccccceEEEeCCCCCeEEECCC---ccchhhcceEEEE-CCEEEEEeCCCCCC---------CCceEEEeeCCCC
Confidence 654322347899999999999999987 4889999998887 89999999986543 4667888888888
Q ss_pred cccc
Q psy14331 260 TLRS 263 (265)
Q Consensus 260 ~w~~ 263 (265)
+|+.
T Consensus 227 ~W~~ 230 (306)
T 3ii7_A 227 EWKM 230 (306)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 8875
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-36 Score=251.42 Aligned_cols=210 Identities=17% Similarity=0.319 Sum_probs=175.0
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCC
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPP 101 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~ 101 (265)
.++.||+.+++|.. .+++|.+|..|+++++ +++||++||........ ++++++||+ |...+++|.+
T Consensus 79 ~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~-------~~~~~~yd~~~~~W~~~~~~p~~ 148 (318)
T 2woz_A 79 YFFQLDNVSSEWVG-LPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEAS-------LDSVLCYDPVAAKWSEVKNLPIK 148 (318)
T ss_dssp EEEEEETTTTEEEE-CSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCE-------EEEEEEEETTTTEEEEECCCSSC
T ss_pred cEEEEeCCCCcEEE-CCCCCccccccceEEE--CCEEEEEcCccCCCCcc-------cceEEEEeCCCCCEeECCCCCCc
Confidence 37899999999998 7889999999999987 99999999963222221 789999999 9999999999
Q ss_pred ccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCC
Q psy14331 102 RCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDN 181 (265)
Q Consensus 102 r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~ 181 (265)
|..|+++.+ +++||++||..... ...+++++||+.+++|+.++++ |.+|..|++++++++||++||.+..
T Consensus 149 r~~~~~~~~---~~~iyv~GG~~~~~-----~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~ 218 (318)
T 2woz_A 149 VYGHNVISH---NGMIYCLGGKTDDK-----KCTNRVFIYNPKKGDWKDLAPM--KTPRSMFGVAIHKGKIVIAGGVTED 218 (318)
T ss_dssp EESCEEEEE---TTEEEEECCEESSS-----CBCCCEEEEETTTTEEEEECCC--SSCCBSCEEEEETTEEEEEEEEETT
T ss_pred ccccEEEEE---CCEEEEEcCCCCCC-----CccceEEEEcCCCCEEEECCCC--CCCcccceEEEECCEEEEEcCcCCC
Confidence 999999887 99999999985433 2478999999999999999865 6899999999999999999998764
Q ss_pred CCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCcccc
Q psy14331 182 LREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDSKTL 261 (265)
Q Consensus 182 ~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~~~w 261 (265)
...+++++||+.+++|+.+.. +|.+|..|+++.+ +++|||+||.+..............+++|.||+++++|
T Consensus 219 ----~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 219 ----GLSASVEAFDLKTNKWEVMTE---FPQERSSISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp ----EEEEEEEEEETTTCCEEECCC---CSSCCBSCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred ----CccceEEEEECCCCeEEECCC---CCCcccceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 346899999999999999987 5888999998877 89999999987542111111123567899999999999
Q ss_pred cc
Q psy14331 262 RS 263 (265)
Q Consensus 262 ~~ 263 (265)
++
T Consensus 291 ~~ 292 (318)
T 2woz_A 291 AG 292 (318)
T ss_dssp EE
T ss_pred hh
Confidence 85
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=250.54 Aligned_cols=204 Identities=19% Similarity=0.279 Sum_probs=173.1
Q ss_pred HHHHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCC
Q psy14331 22 KIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPG 97 (265)
Q Consensus 22 ~~~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~ 97 (265)
...++++.||+.+++|.. .+++|.+|..|+++++ +++||++||. +.... ++++++||+ |...++
T Consensus 74 ~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~--~~~~~-------~~~~~~~d~~~~~W~~~~~ 141 (302)
T 2xn4_A 74 LRVRTVDSYDPVKDQWTS-VANMRDRRSTLGAAVL--NGLLYAVGGF--DGSTG-------LSSVEAYNIKSNEWFHVAP 141 (302)
T ss_dssp SBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTEEEEEEEE--CSSCE-------EEEEEEEETTTTEEEEECC
T ss_pred ccccceEEECCCCCceee-CCCCCccccceEEEEE--CCEEEEEcCC--CCCcc-------CceEEEEeCCCCeEeecCC
Confidence 345678999999999999 7889999999999987 9999999995 33221 689999999 999999
Q ss_pred CCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcC
Q psy14331 98 APPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGG 177 (265)
Q Consensus 98 ~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG 177 (265)
+|.+|..|+++.+ +++||++||...... ...+++++||+.+++|+.++++ |.+|..|++++++++||++||
T Consensus 142 ~p~~r~~~~~~~~---~~~iyv~GG~~~~~~----~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG 212 (302)
T 2xn4_A 142 MNTRRSSVGVGVV---GGLLYAVGGYDVASR----QCLSTVECYNATTNEWTYIAEM--STRRSGAGVGVLNNLLYAVGG 212 (302)
T ss_dssp CSSCCBSCEEEEE---TTEEEEECCEETTTT----EECCCEEEEETTTTEEEEECCC--SSCCBSCEEEEETTEEEEECC
T ss_pred CCCcccCceEEEE---CCEEEEEeCCCCCCC----ccccEEEEEeCCCCcEEECCCC--ccccccccEEEECCEEEEECC
Confidence 9999999999888 899999999865431 2368999999999999999765 689999999999999999999
Q ss_pred ccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecC
Q psy14331 178 FHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPD 257 (265)
Q Consensus 178 ~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~ 257 (265)
.+.. ...+++++||+.+++|+.+.. +|.+|..|+++.+ +++|||+||.+... ..+++|+||++
T Consensus 213 ~~~~----~~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~~~~-~~~i~v~GG~~~~~---------~~~~v~~yd~~ 275 (302)
T 2xn4_A 213 HDGP----LVRKSVEVYDPTTNAWRQVAD---MNMCRRNAGVCAV-NGLLYVVGGDDGSC---------NLASVEYYNPT 275 (302)
T ss_dssp BSSS----SBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCBCSSS---------BCCCEEEEETT
T ss_pred CCCC----cccceEEEEeCCCCCEeeCCC---CCCccccCeEEEE-CCEEEEECCcCCCc---------ccccEEEEcCC
Confidence 8654 347899999999999999987 4788999998877 89999999986543 34567778887
Q ss_pred cccccc
Q psy14331 258 SKTLRS 263 (265)
Q Consensus 258 ~~~w~~ 263 (265)
+++|+.
T Consensus 276 ~~~W~~ 281 (302)
T 2xn4_A 276 TDKWTV 281 (302)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 777764
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1e-36 Score=250.57 Aligned_cols=202 Identities=18% Similarity=0.280 Sum_probs=174.5
Q ss_pred HHHHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCC
Q psy14331 22 KIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPG 97 (265)
Q Consensus 22 ~~~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~ 97 (265)
...++++.||+.+++|.. .+++|.+|..|+++++ +++||++||.. .... ++++++||+ |...++
T Consensus 87 ~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~--~~~~-------~~~~~~yd~~~~~W~~~~~ 154 (308)
T 1zgk_A 87 TDSSALDCYNPMTNQWSP-CAPMSVPRNRIGVGVI--DGHIYAVGGSH--GCIH-------HNSVERYEPERDEWHLVAP 154 (308)
T ss_dssp EECCCEEEEETTTTEEEE-CCCCSSCCBTCEEEEE--TTEEEEECCEE--TTEE-------CCCEEEEETTTTEEEECCC
T ss_pred eecceEEEECCCCCeEeE-CCCCCcCccccEEEEE--CCEEEEEcCCC--CCcc-------cccEEEECCCCCeEeECCC
Confidence 355679999999999999 7889999999999987 99999999963 2221 789999999 999999
Q ss_pred CCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcC
Q psy14331 98 APPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGG 177 (265)
Q Consensus 98 ~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG 177 (265)
+|.+|..|+++.+ +++||++||..... .++++++||+.+++|+.++++ |.+|..|+++.++++||++||
T Consensus 155 ~p~~r~~~~~~~~---~~~iyv~GG~~~~~------~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG 223 (308)
T 1zgk_A 155 MLTRRIGVGVAVL---NRLLYAVGGFDGTN------RLNSAECYYPERNEWRMITAM--NTIRSGAGVCVLHNCIYAAGG 223 (308)
T ss_dssp CSSCCBSCEEEEE---TTEEEEECCBCSSC------BCCCEEEEETTTTEEEECCCC--SSCCBSCEEEEETTEEEEECC
T ss_pred CCccccceEEEEE---CCEEEEEeCCCCCC------cCceEEEEeCCCCeEeeCCCC--CCccccceEEEECCEEEEEeC
Confidence 9999999999988 89999999976543 278999999999999999765 689999999999999999999
Q ss_pred ccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecC
Q psy14331 178 FHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPD 257 (265)
Q Consensus 178 ~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~ 257 (265)
.+.. ...+++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.+... ..+++|.||++
T Consensus 224 ~~~~----~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~---------~~~~v~~yd~~ 286 (308)
T 1zgk_A 224 YDGQ----DQLNSVERYDVETETWTFVAP---MKHRRSALGITVH-QGRIYVLGGYDGHT---------FLDSVECYDPD 286 (308)
T ss_dssp BCSS----SBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE-TTEEEEECCBCSSC---------BCCEEEEEETT
T ss_pred CCCC----CccceEEEEeCCCCcEEECCC---CCCCccceEEEEE-CCEEEEEcCcCCCc---------ccceEEEEcCC
Confidence 8754 347899999999999999987 5889999998877 89999999987543 45678888888
Q ss_pred cccccc
Q psy14331 258 SKTLRS 263 (265)
Q Consensus 258 ~~~w~~ 263 (265)
+++|++
T Consensus 287 ~~~W~~ 292 (308)
T 1zgk_A 287 TDTWSE 292 (308)
T ss_dssp TTEEEE
T ss_pred CCEEee
Confidence 888874
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=249.93 Aligned_cols=208 Identities=17% Similarity=0.314 Sum_probs=176.4
Q ss_pred HHHHHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCC
Q psy14331 21 EKIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAP 96 (265)
Q Consensus 21 ~~~~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~ 96 (265)
...+++++.||+.+++|.. .+++|.+|..|+++++ +++||++||... ... .++++++||+ |...+
T Consensus 66 ~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~-~~~-------~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 66 LFPIKRMDCYNVVKDSWYS-KLGPPTPRDSLAACAA--EGKIYTSGGSEV-GNS-------ALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp SSBCCEEEEEETTTTEEEE-EECCSSCCBSCEEEEE--TTEEEEECCBBT-TBS-------CCCCEEEEETTTTEEEEEC
T ss_pred CCCcceEEEEeCCCCeEEE-CCCCCccccceeEEEE--CCEEEEECCCCC-CCc-------EeeeEEEEeCCCCceEeCC
Confidence 4456789999999999998 7889999999999987 999999999531 211 1789999999 99999
Q ss_pred CCCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEc
Q psy14331 97 GAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFG 176 (265)
Q Consensus 97 ~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~G 176 (265)
++|.+|..|+++.+ +++||++||........ ...+++++||+.+++|+.++++ |.+|..|+++.++++||++|
T Consensus 135 ~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~--~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~i~v~G 207 (306)
T 3ii7_A 135 SMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSG--RVLNSCEVYDPATETWTELCPM--IEARKNHGLVFVKDKIFAVG 207 (306)
T ss_dssp CCSSCCBSCEEEEE---TTEEEEECCEESCTTTC--EECCCEEEEETTTTEEEEECCC--SSCCBSCEEEEETTEEEEEC
T ss_pred CCcCCcceeEEEEE---CCEEEEECCCCCCCCcc--cccceEEEeCCCCCeEEECCCc--cchhhcceEEEECCEEEEEe
Confidence 99999999999888 89999999986543211 1278999999999999999865 68999999999999999999
Q ss_pred CccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEec
Q psy14331 177 GFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTP 256 (265)
Q Consensus 177 G~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~ 256 (265)
|.+.. ...+++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.+... ..+++|.||+
T Consensus 208 G~~~~----~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~---------~~~~~~~yd~ 270 (306)
T 3ii7_A 208 GQNGL----GGLDNVEYYDIKLNEWKMVSP---MPWKGVTVKCAAV-GSIVYVLAGFQGVG---------RLGHILEYNT 270 (306)
T ss_dssp CEETT----EEBCCEEEEETTTTEEEECCC---CSCCBSCCEEEEE-TTEEEEEECBCSSS---------BCCEEEEEET
T ss_pred CCCCC----CCCceEEEeeCCCCcEEECCC---CCCCccceeEEEE-CCEEEEEeCcCCCe---------eeeeEEEEcC
Confidence 98765 347899999999999999987 5889999998887 89999999987543 4567889999
Q ss_pred Ccccccc
Q psy14331 257 DSKTLRS 263 (265)
Q Consensus 257 ~~~~w~~ 263 (265)
++++|+.
T Consensus 271 ~~~~W~~ 277 (306)
T 3ii7_A 271 ETDKWVA 277 (306)
T ss_dssp TTTEEEE
T ss_pred CCCeEEe
Confidence 9988875
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.8e-36 Score=247.98 Aligned_cols=205 Identities=17% Similarity=0.222 Sum_probs=175.3
Q ss_pred HHHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCC
Q psy14331 23 IVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGA 98 (265)
Q Consensus 23 ~~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~ 98 (265)
.+++++.||+.+++|.. .+++|.+|.+|+++++ +++||++||.......... ++++++||+ |...+++
T Consensus 37 ~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~-----~~~~~~~d~~~~~W~~~~~~ 108 (308)
T 1zgk_A 37 SLSYLEAYNPSNGTWLR-LADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTD-----SSALDCYNPMTNQWSPCAPM 108 (308)
T ss_dssp BCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEE-----CCCEEEEETTTTEEEECCCC
T ss_pred CcceEEEEcCCCCeEeE-CCCCCcccccceEEEE--CCEEEEECCCcCCCCCCee-----cceEEEECCCCCeEeECCCC
Confidence 55679999999999999 6889999999998886 9999999996422122222 799999999 9999999
Q ss_pred CCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCc
Q psy14331 99 PPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGF 178 (265)
Q Consensus 99 p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 178 (265)
|.+|..|+++.+ +++||++||..... ..+++++||+.+++|+.++++ |.+|..|+++.++++||++||.
T Consensus 109 p~~r~~~~~~~~---~~~iyv~GG~~~~~------~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 109 SVPRNRIGVGVI---DGHIYAVGGSHGCI------HHNSVERYEPERDEWHLVAPM--LTRRIGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp SSCCBTCEEEEE---TTEEEEECCEETTE------ECCCEEEEETTTTEEEECCCC--SSCCBSCEEEEETTEEEEECCB
T ss_pred CcCccccEEEEE---CCEEEEEcCCCCCc------ccccEEEECCCCCeEeECCCC--CccccceEEEEECCEEEEEeCC
Confidence 999999999988 89999999986532 378999999999999999865 6899999999999999999998
Q ss_pred cCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCc
Q psy14331 179 HDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDS 258 (265)
Q Consensus 179 ~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~ 258 (265)
+... .++++++||+.+++|+.+.. +|.+|..|+++.+ +++|||+||.+... ..+++|.||+++
T Consensus 178 ~~~~----~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~---------~~~~v~~yd~~~ 240 (308)
T 1zgk_A 178 DGTN----RLNSAECYYPERNEWRMITA---MNTIRSGAGVCVL-HNCIYAAGGYDGQD---------QLNSVERYDVET 240 (308)
T ss_dssp CSSC----BCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE-TTEEEEECCBCSSS---------BCCCEEEEETTT
T ss_pred CCCC----cCceEEEEeCCCCeEeeCCC---CCCccccceEEEE-CCEEEEEeCCCCCC---------ccceEEEEeCCC
Confidence 7653 37899999999999999987 4889999998877 89999999987543 356788888888
Q ss_pred ccccc
Q psy14331 259 KTLRS 263 (265)
Q Consensus 259 ~~w~~ 263 (265)
++|+.
T Consensus 241 ~~W~~ 245 (308)
T 1zgk_A 241 ETWTF 245 (308)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 88875
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=246.61 Aligned_cols=203 Identities=18% Similarity=0.287 Sum_probs=173.6
Q ss_pred HHHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCC
Q psy14331 23 IVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGA 98 (265)
Q Consensus 23 ~~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~ 98 (265)
.++++++||+.+++|.. .+++|.+|.+|+++++ +++||++||. ++... ++++++||+ |...+++
T Consensus 28 ~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~--~~~~~-------~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 28 AIRSVECYDFKEERWHQ-VAELPSRRCRAGMVYM--AGLVFAVGGF--NGSLR-------VRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp BCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTEEEEESCB--CSSSB-------CCCEEEEETTTTEEEEECCC
T ss_pred CCCcEEEEcCcCCcEeE-cccCCcccccceEEEE--CCEEEEEeCc--CCCcc-------ccceEEECCCCCceeeCCCC
Confidence 45678999999999998 6789999999998886 9999999995 32221 789999999 9999999
Q ss_pred CCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCc
Q psy14331 99 PPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGF 178 (265)
Q Consensus 99 p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 178 (265)
|.+|..|+++.+ +++||++||..... .++++++||+.+++|+.++++ |.+|..|+++.++++||++||.
T Consensus 96 p~~r~~~~~~~~---~~~iyv~GG~~~~~------~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~ 164 (302)
T 2xn4_A 96 RDRRSTLGAAVL---NGLLYAVGGFDGST------GLSSVEAYNIKSNEWFHVAPM--NTRRSSVGVGVVGGLLYAVGGY 164 (302)
T ss_dssp SSCCBSCEEEEE---TTEEEEEEEECSSC------EEEEEEEEETTTTEEEEECCC--SSCCBSCEEEEETTEEEEECCE
T ss_pred CccccceEEEEE---CCEEEEEcCCCCCc------cCceEEEEeCCCCeEeecCCC--CCcccCceEEEECCEEEEEeCC
Confidence 999999999988 89999999975432 368999999999999999876 5899999999999999999998
Q ss_pred cCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCc
Q psy14331 179 HDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDS 258 (265)
Q Consensus 179 ~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~ 258 (265)
+.... ...+++++||+.+++|+.+.. +|.+|..|+++++ +++|||+||.+... ..+++|+||+++
T Consensus 165 ~~~~~--~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~---------~~~~~~~yd~~~ 229 (302)
T 2xn4_A 165 DVASR--QCLSTVECYNATTNEWTYIAE---MSTRRSGAGVGVL-NNLLYAVGGHDGPL---------VRKSVEVYDPTT 229 (302)
T ss_dssp ETTTT--EECCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCBSSSS---------BCCCEEEEETTT
T ss_pred CCCCC--ccccEEEEEeCCCCcEEECCC---CccccccccEEEE-CCEEEEECCCCCCc---------ccceEEEEeCCC
Confidence 65431 347899999999999999987 4888999998877 89999999986543 356788888888
Q ss_pred ccccc
Q psy14331 259 KTLRS 263 (265)
Q Consensus 259 ~~w~~ 263 (265)
++|+.
T Consensus 230 ~~W~~ 234 (302)
T 2xn4_A 230 NAWRQ 234 (302)
T ss_dssp TEEEE
T ss_pred CCEee
Confidence 88874
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=245.23 Aligned_cols=208 Identities=17% Similarity=0.348 Sum_probs=170.7
Q ss_pred HHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCC--ceeeCCCcccCceEEEEe----eecCCCC
Q psy14331 25 RDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQ--KFVFGSPKALDHLILMNL----FVSAPGA 98 (265)
Q Consensus 25 ~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~--~~~~~~~~~~~~~~~yd~----w~~~~~~ 98 (265)
++++.||+.+++|.....+.|.+|.+|+++++ +++||++||...++. .... .+++++||+ |...+++
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~-----~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPM-----SAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECT--TCCEEEEEEEEECSSCSSSCE-----EEEEEEEETTTTEEEECCCB
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEE--CCEEEEEcCcccCCCCCcccc-----ccceEEecCCCCeEEECCCC
Confidence 35889999999998733344778999998885 999999999743221 1111 567999999 9999999
Q ss_pred CCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCc
Q psy14331 99 PPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGF 178 (265)
Q Consensus 99 p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~ 178 (265)
|.+|..|+++.+ +++||++||....... ...+++++||+.+++|+.++++ |.+|..|+++.++++||++||.
T Consensus 86 p~~r~~~~~~~~---~~~lyv~GG~~~~~~~---~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 86 PSPRCLFGLGEA---LNSIYVVGGREIKDGE---RCLDSVMCYDRLSFKWGESDPL--PYVVYGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp SSCEESCEEEEE---TTEEEEECCEESSTTC---CBCCCEEEEETTTTEEEECCCC--SSCCBSCEEEEETTEEEEECCB
T ss_pred CcchhceeEEEE---CCEEEEEeCCcCCCCC---cccceEEEECCCCCcEeECCCC--CCcccceeEEEECCEEEEEeCC
Confidence 999999999988 8999999997532111 3479999999999999999865 6899999999999999999998
Q ss_pred cCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCc
Q psy14331 179 HDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDS 258 (265)
Q Consensus 179 ~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~ 258 (265)
.... ...+++++||+.+++|+.+.+ +|.+|..|+++++ +++|||+||.+... ..+++|.||+++
T Consensus 158 ~~~~---~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~---------~~~~~~~yd~~~ 221 (315)
T 4asc_A 158 GSDR---KCLNKMCVYDPKKFEWKELAP---MQTARSLFGATVH-DGRIIVAAGVTDTG---------LTSSAEVYSITD 221 (315)
T ss_dssp CTTS---CBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE-TTEEEEEEEECSSS---------EEEEEEEEETTT
T ss_pred CCCC---cccceEEEEeCCCCeEEECCC---CCCchhceEEEEE-CCEEEEEeccCCCC---------ccceEEEEECCC
Confidence 4332 458899999999999999987 4889999998877 89999999987553 456788888888
Q ss_pred ccccc
Q psy14331 259 KTLRS 263 (265)
Q Consensus 259 ~~w~~ 263 (265)
++|+.
T Consensus 222 ~~W~~ 226 (315)
T 4asc_A 222 NKWAP 226 (315)
T ss_dssp TEEEE
T ss_pred CeEEE
Confidence 88874
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.5e-36 Score=244.54 Aligned_cols=202 Identities=17% Similarity=0.268 Sum_probs=174.0
Q ss_pred HHHHHHHHhhcccce---EEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eec
Q psy14331 22 KIVRDIEAEEKRKNK---VIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVS 94 (265)
Q Consensus 22 ~~~~~~~~~d~~~~~---w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~ 94 (265)
...++++.||+.+++ |.. .+++|.+|..|+++++ +++||++||.. +... ++++++||+ |..
T Consensus 75 ~~~~~~~~~d~~~~~~~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~--~~~~-------~~~~~~~d~~~~~W~~ 142 (301)
T 2vpj_A 75 SRLSSVECLDYTADEDGVWYS-VAPMNVRRGLAGATTL--GDMIYVSGGFD--GSRR-------HTSMERYDPNIDQWSM 142 (301)
T ss_dssp CBCCCEEEEETTCCTTCCCEE-ECCCSSCCBSCEEEEE--TTEEEEECCBC--SSCB-------CCEEEEEETTTTEEEE
T ss_pred ccCceEEEEECCCCCCCeeEE-CCCCCCCccceeEEEE--CCEEEEEcccC--CCcc-------cceEEEEcCCCCeEEE
Confidence 355679999999999 999 7889999999999987 89999999953 2221 689999999 999
Q ss_pred CCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEE
Q psy14331 95 APGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVV 174 (265)
Q Consensus 95 ~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv 174 (265)
.+++|.+|..|+++.+ +++||++||..... ..+++++||+.+++|+.++++ |.+|..|+++.++++||+
T Consensus 143 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~------~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~~~~i~v 211 (301)
T 2vpj_A 143 LGDMQTAREGAGLVVA---SGVIYCLGGYDGLN------ILNSVEKYDPHTGHWTNVTPM--ATKRSGAGVALLNDHIYV 211 (301)
T ss_dssp EEECSSCCBSCEEEEE---TTEEEEECCBCSSC------BCCCEEEEETTTTEEEEECCC--SSCCBSCEEEEETTEEEE
T ss_pred CCCCCCCcccceEEEE---CCEEEEECCCCCCc------ccceEEEEeCCCCcEEeCCCC--CcccccceEEEECCEEEE
Confidence 9999999999999988 89999999975432 378999999999999999765 689999999999999999
Q ss_pred EcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEE
Q psy14331 175 FGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLL 254 (265)
Q Consensus 175 ~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~ 254 (265)
+||.+.. ...+++++||+.+++|+.+.. +|.+|..|+++.+ +++|||+||.+... ..+++|.|
T Consensus 212 ~GG~~~~----~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~---------~~~~v~~y 274 (301)
T 2vpj_A 212 VGGFDGT----AHLSSVEAYNIRTDSWTTVTS---MTTPRCYVGATVL-RGRLYAIAGYDGNS---------LLSSIECY 274 (301)
T ss_dssp ECCBCSS----SBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCBCSSS---------BEEEEEEE
T ss_pred EeCCCCC----cccceEEEEeCCCCcEEECCC---CCCcccceeEEEE-CCEEEEEcCcCCCc---------ccccEEEE
Confidence 9998764 237899999999999999987 5888999998877 89999999986543 45678888
Q ss_pred ecCcccccc
Q psy14331 255 TPDSKTLRS 263 (265)
Q Consensus 255 ~~~~~~w~~ 263 (265)
|+++++|+.
T Consensus 275 d~~~~~W~~ 283 (301)
T 2vpj_A 275 DPIIDSWEV 283 (301)
T ss_dssp ETTTTEEEE
T ss_pred cCCCCeEEE
Confidence 888888874
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=242.72 Aligned_cols=202 Identities=15% Similarity=0.258 Sum_probs=173.7
Q ss_pred HHHHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-------eec
Q psy14331 22 KIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-------FVS 94 (265)
Q Consensus 22 ~~~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-------w~~ 94 (265)
..+++++.||+.+++|.. .+++|.+|.+|+++++ +++||++||.. +.. .++++++||+ |..
T Consensus 28 ~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~l~v~GG~~--~~~-------~~~~~~~~d~~~~~~~~W~~ 95 (301)
T 2vpj_A 28 SPIDVVEKYDPKTQEWSF-LPSITRKRRYVASVSL--HDRIYVIGGYD--GRS-------RLSSVECLDYTADEDGVWYS 95 (301)
T ss_dssp EECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEE--TTEEEEECCBC--SSC-------BCCCEEEEETTCCTTCCCEE
T ss_pred cceeEEEEEcCCCCeEEe-CCCCChhhccccEEEE--CCEEEEEcCCC--CCc-------cCceEEEEECCCCCCCeeEE
Confidence 456789999999999998 7788999999999886 89999999953 221 1789999998 888
Q ss_pred CCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEE
Q psy14331 95 APGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVV 174 (265)
Q Consensus 95 ~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv 174 (265)
.+++|.+|..|+++.+ +++||++||..... ..+++++||+.+++|+.++++ |.+|..|+++.++++||+
T Consensus 96 ~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~------~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv 164 (301)
T 2vpj_A 96 VAPMNVRRGLAGATTL---GDMIYVSGGFDGSR------RHTSMERYDPNIDQWSMLGDM--QTAREGAGLVVASGVIYC 164 (301)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCBCSSC------BCCEEEEEETTTTEEEEEEEC--SSCCBSCEEEEETTEEEE
T ss_pred CCCCCCCccceeEEEE---CCEEEEEcccCCCc------ccceEEEEcCCCCeEEECCCC--CCCcccceEEEECCEEEE
Confidence 8999999999999988 89999999986432 378999999999999999876 589999999999999999
Q ss_pred EcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEE
Q psy14331 175 FGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLL 254 (265)
Q Consensus 175 ~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~ 254 (265)
+||.+.. ...+++++||+.+++|+.+.. +|.+|..|+++.+ +++|||+||.+... ..+++|.|
T Consensus 165 ~GG~~~~----~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~-~~~i~v~GG~~~~~---------~~~~v~~y 227 (301)
T 2vpj_A 165 LGGYDGL----NILNSVEKYDPHTGHWTNVTP---MATKRSGAGVALL-NDHIYVVGGFDGTA---------HLSSVEAY 227 (301)
T ss_dssp ECCBCSS----CBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEECCBCSSS---------BCCCEEEE
T ss_pred ECCCCCC----cccceEEEEeCCCCcEEeCCC---CCcccccceEEEE-CCEEEEEeCCCCCc---------ccceEEEE
Confidence 9998654 357899999999999999987 4889999998877 89999999987543 25678888
Q ss_pred ecCcccccc
Q psy14331 255 TPDSKTLRS 263 (265)
Q Consensus 255 ~~~~~~w~~ 263 (265)
|+++++|+.
T Consensus 228 d~~~~~W~~ 236 (301)
T 2vpj_A 228 NIRTDSWTT 236 (301)
T ss_dssp ETTTTEEEE
T ss_pred eCCCCcEEE
Confidence 888888874
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=7.5e-35 Score=240.50 Aligned_cols=205 Identities=20% Similarity=0.370 Sum_probs=167.9
Q ss_pred HHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCc--eeeCCCcccCceEEEEe----eecCCCCCC
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQK--FVFGSPKALDHLILMNL----FVSAPGAPP 100 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~--~~~~~~~~~~~~~~yd~----w~~~~~~p~ 100 (265)
++.||+.+++|.....+.|.+|.+|++++. +++||++||...+... ... .+++++||+ |...+++|.
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~-----~~~~~~~d~~~~~W~~~~~~p~ 98 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQ--QNQVYVVGGLYVDEENKDQPL-----QSYFFQLDNVSSEWVGLPPLPS 98 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECS--SSCEEEEESSCC-------CC-----CBEEEEEETTTTEEEECSCBSS
T ss_pred eEEECCCCCceecccCCccCCccceEEEEE--CCEEEEECCcccCccccCCCc-----cccEEEEeCCCCcEEECCCCCc
Confidence 689999999998843355688999888875 9999999995322211 111 356999999 999999999
Q ss_pred CccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccC
Q psy14331 101 PRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHD 180 (265)
Q Consensus 101 ~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~ 180 (265)
+|..|+++.+ +++||++||...... ..++++++||+.+++|+.++++ |.+|..|++++.+++||++||...
T Consensus 99 ~r~~~~~~~~---~~~iyv~GG~~~~~~----~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~ 169 (318)
T 2woz_A 99 ARCLFGLGEV---DDKIYVVAGKDLQTE----ASLDSVLCYDPVAAKWSEVKNL--PIKVYGHNVISHNGMIYCLGGKTD 169 (318)
T ss_dssp CBCSCEEEEE---TTEEEEEEEEBTTTC----CEEEEEEEEETTTTEEEEECCC--SSCEESCEEEEETTEEEEECCEES
T ss_pred cccccceEEE---CCEEEEEcCccCCCC----cccceEEEEeCCCCCEeECCCC--CCcccccEEEEECCEEEEEcCCCC
Confidence 9999999988 899999999863221 3478999999999999999865 689999999999999999999854
Q ss_pred CCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCccc
Q psy14331 181 NLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDSKT 260 (265)
Q Consensus 181 ~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 260 (265)
.. ...+++++||+.+++|+.+.. .|.+|..|+++++ +++|||+||.+... ..+++|+||+++++
T Consensus 170 ~~---~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~-~~~iyv~GG~~~~~---------~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 170 DK---KCTNRVFIYNPKKGDWKDLAP---MKTPRSMFGVAIH-KGKIVIAGGVTEDG---------LSASVEAFDLKTNK 233 (318)
T ss_dssp SS---CBCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEE-TTEEEEEEEEETTE---------EEEEEEEEETTTCC
T ss_pred CC---CccceEEEEcCCCCEEEECCC---CCCCcccceEEEE-CCEEEEEcCcCCCC---------ccceEEEEECCCCe
Confidence 32 447899999999999999987 4889999998877 89999999987543 46678899999998
Q ss_pred ccc
Q psy14331 261 LRS 263 (265)
Q Consensus 261 w~~ 263 (265)
|+.
T Consensus 234 W~~ 236 (318)
T 2woz_A 234 WEV 236 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.8e-33 Score=233.17 Aligned_cols=219 Identities=16% Similarity=0.167 Sum_probs=164.9
Q ss_pred HHHHHHHHhhcccceEEEeccCCC-CCCCceeeEEecCCCEEEEECcEEeCCCcee------------------------
Q psy14331 22 KIVRDIEAEEKRKNKVIEKVVPEP-TRRANFSFLAHPDKDQLILFGGEFYDGQKFV------------------------ 76 (265)
Q Consensus 22 ~~~~~~~~~d~~~~~w~~~~~~~p-~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~------------------------ 76 (265)
..+++++.||+.+++|.. .++++ .+|.+|++++. +++||++||.........
T Consensus 83 ~~~~~v~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (357)
T 2uvk_A 83 QVFNDVHKYNPKTNSWVK-LMSHAPMGMAGHVTFVH--NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDK 159 (357)
T ss_dssp EECCCEEEEETTTTEEEE-CSCCCSSCCSSEEEEEE--TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred eeeccEEEEeCCCCcEEE-CCCCCCcccccceEEEE--CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccc
Confidence 456789999999999999 55555 99999998886 999999999532110000
Q ss_pred -eCCCcccCceEEEEe----eecCCCCCCCccc-cceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEc--CCCcE
Q psy14331 77 -FGSPKALDHLILMNL----FVSAPGAPPPRCS-HQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRM--GEKKW 148 (265)
Q Consensus 77 -~~~~~~~~~~~~yd~----w~~~~~~p~~r~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~--~~~~W 148 (265)
......++++++||+ |+..+++|.+|.. |+++.+ +++||++||..... ...+++++||+ .+++|
T Consensus 160 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~---~~~iyv~GG~~~~~-----~~~~~v~~~d~d~~~~~W 231 (357)
T 2uvk_A 160 KAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK---GDKTWLINGEAKPG-----LRTDAVFELDFTGNNLKW 231 (357)
T ss_dssp CGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE---TTEEEEECCEEETT-----EECCCEEEEECC---CEE
T ss_pred cccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE---CCEEEEEeeecCCC-----cccCceEEEEecCCCCcE
Confidence 000012689999999 9999999987665 887777 89999999986443 23688999986 89999
Q ss_pred EEEecCCCCCCCcCceEEEECCEEEEEcCccCCCC-------------ccccCCceEEEEcCCCceEEeccCCCCCCCCC
Q psy14331 149 EKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLR-------------EAKYYNDVHIFDLETYAWKKIEPLGAGPAPRS 215 (265)
Q Consensus 149 ~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~-------------~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~ 215 (265)
+.++.++.|.+|..|++++++++|||+||...... ....+.++++||+.+++|+.+.. +|.+|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~ 308 (357)
T 2uvk_A 232 NKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE---LSQGRA 308 (357)
T ss_dssp EECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE---CSSCCB
T ss_pred EecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC---CCCCcc
Confidence 99988765666778889999999999999754311 11234689999999999999987 588999
Q ss_pred CceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCcccccc
Q psy14331 216 GCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDSKTLRS 263 (265)
Q Consensus 216 ~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~~~w~~ 263 (265)
.|+++.+ +++|||+||.+... ...+++|.++.+.++|..
T Consensus 309 ~~~~~~~-~~~i~v~GG~~~~~--------~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 309 YGVSLPW-NNSLLIIGGETAGG--------KAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp SSEEEEE-TTEEEEEEEECGGG--------CEEEEEEEEEC-CCSCEE
T ss_pred cceeEEe-CCEEEEEeeeCCCC--------CEeeeEEEEEEcCcEeEe
Confidence 9998776 89999999987543 246889999999999875
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.8e-32 Score=227.10 Aligned_cols=221 Identities=14% Similarity=0.158 Sum_probs=162.6
Q ss_pred HHHHHhhcc--cceEEEeccCCC-CCCCceeeEEecCCCEEEEECcEEe-CCCceeeCCCcccCceEEEEe----eecCC
Q psy14331 25 RDIEAEEKR--KNKVIEKVVPEP-TRRANFSFLAHPDKDQLILFGGEFY-DGQKFVFGSPKALDHLILMNL----FVSAP 96 (265)
Q Consensus 25 ~~~~~~d~~--~~~w~~~~~~~p-~~r~~~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~~~~~~~~~yd~----w~~~~ 96 (265)
++++.||+. +++|.. .+++| .+|.+|+++++ +++|||+||... ....... ++++++||+ |...+
T Consensus 31 ~~~~~~d~~~~~~~W~~-~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~-----~~~v~~yd~~~~~W~~~~ 102 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTA-LAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQV-----FNDVHKYNPKTNSWVKLM 102 (357)
T ss_dssp TCEEEEETTSSSCCEEE-CCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEE-----CCCEEEEETTTTEEEECS
T ss_pred CeEEEEccccCCCCeeE-CCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCcccee-----eccEEEEeCCCCcEEECC
Confidence 368999998 499998 77788 89999999987 999999999632 1212222 799999999 99999
Q ss_pred CCC-CCccccceEEEecCCCEEEEEcCcccCCC----------------------------ccccccCCceeEEEcCCCc
Q psy14331 97 GAP-PPRCSHQMVALSADKGQLWMFGGEFSSAS----------------------------ESQFHHYKDLWVFRMGEKK 147 (265)
Q Consensus 97 ~~p-~~r~~~~~~~~~~~~~~iyv~GG~~~~~~----------------------------~~~~~~~~~~~~yd~~~~~ 147 (265)
+++ .+|..|+++.+ +++||++||...... ......++++++||+.+++
T Consensus 103 ~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 179 (357)
T 2uvk_A 103 SHAPMGMAGHVTFVH---NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQ 179 (357)
T ss_dssp CCCSSCCSSEEEEEE---TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTE
T ss_pred CCCCcccccceEEEE---CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCc
Confidence 988 89999998887 999999999743210 0001136899999999999
Q ss_pred EEEEecCCCCCC-CcCceEEEECCEEEEEcCccCCCCccccCCceEEEEc--CCCceEEeccCCCCCCCCCCceEEEeCC
Q psy14331 148 WEKIVCKDTPPS-RSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDL--ETYAWKKIEPLGAGPAPRSGCQMAATPD 224 (265)
Q Consensus 148 W~~~~~~~~p~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~--~~~~W~~~~~~~~~p~~~~~~~~~~~~~ 224 (265)
|+.+.++ |.+ +..|+++.++++||+|||..... ...+++++||+ .+++|+.+..++ .|.+|..|+++++ +
T Consensus 180 W~~~~~~--p~~~~~~~~~~~~~~~iyv~GG~~~~~---~~~~~v~~~d~d~~~~~W~~~~~~~-~~~~~~~~~~~~~-~ 252 (357)
T 2uvk_A 180 WSYAGES--PWYGTAGAAVVNKGDKTWLINGEAKPG---LRTDAVFELDFTGNNLKWNKLAPVS-SPDGVAGGFAGIS-N 252 (357)
T ss_dssp EEEEEEC--SSCCCBSCEEEEETTEEEEECCEEETT---EECCCEEEEECC---CEEEECCCSS-TTTCCBSCEEEEE-T
T ss_pred EEECCCC--CCCCcccccEEEECCEEEEEeeecCCC---cccCceEEEEecCCCCcEEecCCCC-CCcccccceEEEE-C
Confidence 9999876 454 44589999999999999986542 34688999987 899999998863 2445667777776 8
Q ss_pred CeEEEEcCccccccccc--------cccceeeceEEEEecCcccccc
Q psy14331 225 GKILISGGYSKQSVKKD--------VDKGIVHTDTFLLTPDSKTLRS 263 (265)
Q Consensus 225 ~~iyi~GG~~~~~~~~~--------~~~~~~~~~~w~~~~~~~~w~~ 263 (265)
++|||+||.+....... ........++++||+++++|+.
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~ 299 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK 299 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceee
Confidence 99999999864321000 0112234678999999999975
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.98 E-value=4.4e-32 Score=245.01 Aligned_cols=212 Identities=20% Similarity=0.235 Sum_probs=172.4
Q ss_pred HHHHHHHHhhcccceEEEec-c----CCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----e
Q psy14331 22 KIVRDIEAEEKRKNKVIEKV-V----PEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----F 92 (265)
Q Consensus 22 ~~~~~~~~~d~~~~~w~~~~-~----~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w 92 (265)
..+++++.||+.+++|..+. + .+|.+|.+|++++++.+++|||+||...... +++++|+||+ |
T Consensus 409 ~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~--------~~~dv~~yd~~t~~W 480 (695)
T 2zwa_A 409 YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQ--------GLSDNWIFDMKTREW 480 (695)
T ss_dssp SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTC--------BCCCCEEEETTTTEE
T ss_pred CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCC--------ccccEEEEeCCCCcE
Confidence 45678999999999999854 2 3799999999998622899999999532221 1799999999 9
Q ss_pred ecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCC-CCCCCcCceEEEEC--
Q psy14331 93 VSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKD-TPPSRSGHRMIALK-- 169 (265)
Q Consensus 93 ~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~p~~~~~~~~~~~~-- 169 (265)
...+++|.+|..|+++.+. +++|||+||.... . ++++||+.+++|+.+++.. +|.+|..|++++++
T Consensus 481 ~~~~~~p~~R~~h~~~~~~--~~~iyv~GG~~~~--------~-~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 481 SMIKSLSHTRFRHSACSLP--DGNVLILGGVTEG--------P-AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp EECCCCSBCCBSCEEEECT--TSCEEEECCBCSS--------C-SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred EECCCCCCCcccceEEEEc--CCEEEEECCCCCC--------C-CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 9999999999999998853 8999999997543 1 7999999999999998743 57899999988876
Q ss_pred -CEEEEEcCccCCCCccccCCceEEEEcCCCc------eEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcccccccccc
Q psy14331 170 -KHLVVFGGFHDNLREAKYYNDVHIFDLETYA------WKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDV 242 (265)
Q Consensus 170 -~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~------W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~ 242 (265)
++||++||..... ....+++++||+.+++ |+.+..+ ++.+|.+|+++++.+++|||+||.+....
T Consensus 550 ~~~iyv~GG~~~~~--~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~~~~~~~~~iyv~GG~~~~~~---- 621 (695)
T 2zwa_A 550 SKQGIILGGGFMDQ--TTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGSQIKYITPRKLLIVGGTSPSGL---- 621 (695)
T ss_dssp TTEEEEECCBCTTS--SCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCEEEEEETTEEEEECCBCSSCC----
T ss_pred CCEEEEECCcCCCC--CeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccceEEEeCCCEEEEECCccCCCC----
Confidence 8999999986543 1457899999999999 8988874 35789999988883399999999864431
Q ss_pred ccceeeceEEEEecCccccc
Q psy14331 243 DKGIVHTDTFLLTPDSKTLR 262 (265)
Q Consensus 243 ~~~~~~~~~w~~~~~~~~w~ 262 (265)
....+++|.||+.+++|+
T Consensus 622 --~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 622 --FDRTNSIISLDPLSETLT 639 (695)
T ss_dssp --CCTTTSEEEEETTTTEEE
T ss_pred --CCCCCeEEEEECCCCeEE
Confidence 124667899999999986
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=7.9e-28 Score=217.27 Aligned_cols=186 Identities=16% Similarity=0.288 Sum_probs=148.3
Q ss_pred ccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCC-C-----CCCCccccceEEE
Q psy14331 41 VVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAP-G-----APPPRCSHQMVAL 110 (265)
Q Consensus 41 ~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~-~-----~p~~r~~~~~~~~ 110 (265)
.+..|.+|.+++++ + +++||++||. .... ++++++||+ |...+ + +|.+|..|+++.+
T Consensus 382 ~~~~p~rr~g~~~~-~--~~~iyv~GG~--~~~~--------~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~ 448 (695)
T 2zwa_A 382 CECPINRKFGDVDV-A--GNDVFYMGGS--NPYR--------VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTI 448 (695)
T ss_dssp CCCTTCCBSCEEEE-C--SSCEEEECCB--SSSB--------CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEE
T ss_pred cCCCCCCceeEEEE-E--CCEEEEECCC--CCCC--------cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEE
Confidence 34566677765544 3 8999999995 3321 789999999 88776 4 8999999999876
Q ss_pred ecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCC
Q psy14331 111 SADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYN 189 (265)
Q Consensus 111 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~ 189 (265)
.. +++|||+||..... ..++++++||+.+++|+.++++ |.+|..|+++++ +++||||||.+...
T Consensus 449 ~~-~~~lyv~GG~~~~~-----~~~~dv~~yd~~t~~W~~~~~~--p~~R~~h~~~~~~~~~iyv~GG~~~~~------- 513 (695)
T 2zwa_A 449 SR-NNQLLLIGGRKAPH-----QGLSDNWIFDMKTREWSMIKSL--SHTRFRHSACSLPDGNVLILGGVTEGP------- 513 (695)
T ss_dssp TT-TTEEEEECCBSSTT-----CBCCCCEEEETTTTEEEECCCC--SBCCBSCEEEECTTSCEEEECCBCSSC-------
T ss_pred cc-CCEEEEEcCCCCCC-----CccccEEEEeCCCCcEEECCCC--CCCcccceEEEEcCCEEEEECCCCCCC-------
Confidence 11 68999999986543 2478999999999999999766 689999999997 99999999986542
Q ss_pred ceEEEEcCCCceEEeccCCCCCCCCCCceEEEeC-C-CeEEEEcCccccccccccccceeeceEEEEecCcccc
Q psy14331 190 DVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATP-D-GKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDSKTL 261 (265)
Q Consensus 190 ~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~-~-~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~~~w 261 (265)
++++||+.+++|+.+...+..|.+|.+|+++++. + ++|||+||..... ....+++|+||+.+++|
T Consensus 514 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~-------~~~~~~v~~yd~~~~~w 580 (695)
T 2zwa_A 514 AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ-------TTVSDKAIIFKYDAENA 580 (695)
T ss_dssp SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS-------SCBCCEEEEEEECTTCS
T ss_pred CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC-------CeeeCcEEEEEccCCcc
Confidence 8999999999999999866678899999866652 2 8899999986432 12457899999988883
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.92 E-value=7.7e-25 Score=197.17 Aligned_cols=212 Identities=17% Similarity=0.234 Sum_probs=153.5
Q ss_pred HHHHHhhcccceEEEeccCCCCCCCcee--eEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCC
Q psy14331 25 RDIEAEEKRKNKVIEKVVPEPTRRANFS--FLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGA 98 (265)
Q Consensus 25 ~~~~~~d~~~~~w~~~~~~~p~~r~~~~--~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~ 98 (265)
..++.||+.+++|.. ...+|.+|..|+ ++++ .+++||++||. + .+++++||+ |+..++|
T Consensus 219 ~~~~~yd~~t~~w~~-~~~~~~~~~~~~~~~~~~-~~g~lyv~GG~--~-----------~~~v~~yd~~t~~W~~~~~~ 283 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSD-RTVTVTKHDMFCPGISMD-GNGQIVVTGGN--D-----------AKKTSLYDSSSDSWIPGPDM 283 (656)
T ss_dssp EEEEEECTTTCCBCC-CEEEECSCCCSSCEEEEC-TTSCEEEECSS--S-----------TTCEEEEEGGGTEEEECCCC
T ss_pred EEEEEEeCCCCcEEe-CcccCCCCCCccccccCC-CCCCEEEeCCC--C-----------CCceEEecCcCCceeECCCC
Confidence 357899999999988 666777776554 3433 58999999993 2 247999999 9999999
Q ss_pred CCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEe-----cCCCC----------------
Q psy14331 99 PPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIV-----CKDTP---------------- 157 (265)
Q Consensus 99 p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~-----~~~~p---------------- 157 (265)
|.+|..|+++.+. +++||++||..... ...+++++||+.+++|+.++ ++..+
T Consensus 284 ~~~R~~~s~~~~~--dg~iyv~GG~~~~~-----~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~G 356 (656)
T 1k3i_A 284 QVARGYQSSATMS--DGRVFTIGGSWSGG-----VFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFG 356 (656)
T ss_dssp SSCCSSCEEEECT--TSCEEEECCCCCSS-----SCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEE
T ss_pred CccccccceEEec--CCeEEEEeCcccCC-----cccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEE
Confidence 9999999988764 78999999953322 23788999999999999973 22100
Q ss_pred ---------------------------------------CCCcCceEEE---ECCEEEEEcCccCCCCccccCC---ceE
Q psy14331 158 ---------------------------------------PSRSGHRMIA---LKKHLVVFGGFHDNLREAKYYN---DVH 192 (265)
Q Consensus 158 ---------------------------------------~~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~---~v~ 192 (265)
.++..++++. .+++||++||...... ...++ .++
T Consensus 357 g~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~-~~~~~~~~~v~ 435 (656)
T 1k3i_A 357 WKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD-SDATTNAHIIT 435 (656)
T ss_dssp CGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS-SBCCCCEEEEE
T ss_pred CCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC-CCcCCcceEEE
Confidence 0122334443 3899999999753211 12234 789
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCcccccc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDSKTLRS 263 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~~~w~~ 263 (265)
+||+.+++|..+. .+.+|.+|..|+++++.+++|||+||.+.... .....+..++++||+.+++|+.
T Consensus 436 ~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~---~~~~~~~~~v~~ydp~t~~W~~ 502 (656)
T 1k3i_A 436 LGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIP---FEDSTPVFTPEIYVPEQDTFYK 502 (656)
T ss_dssp CCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCT---TCCCSBCCCCEEEEGGGTEEEE
T ss_pred cCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcC---cCCCCcccceEEEcCCCCceee
Confidence 9999999999987 12258899999988777999999999764311 0112356678888888888864
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.91 E-value=1.2e-23 Score=189.34 Aligned_cols=193 Identities=16% Similarity=0.149 Sum_probs=144.0
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecC-----C
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSA-----P 96 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~-----~ 96 (265)
+++.||+.+++|.. .+++|.+|.+|+++++ .+++||++||....... ++++++||+ |... .
T Consensus 266 ~v~~yd~~t~~W~~-~~~~~~~R~~~s~~~~-~dg~iyv~GG~~~~~~~--------~~~~e~yd~~t~~W~~~~~~~~~ 335 (656)
T 1k3i_A 266 KTSLYDSSSDSWIP-GPDMQVARGYQSSATM-SDGRVFTIGGSWSGGVF--------EKNGEVYSPSSKTWTSLPNAKVN 335 (656)
T ss_dssp CEEEEEGGGTEEEE-CCCCSSCCSSCEEEEC-TTSCEEEECCCCCSSSC--------CCCEEEEETTTTEEEEETTSCSG
T ss_pred ceEEecCcCCceeE-CCCCCccccccceEEe-cCCeEEEEeCcccCCcc--------cccceEeCCCCCcceeCCCcccc
Confidence 68999999999998 7889999999998885 38899999994222221 688999998 7764 2
Q ss_pred CCCCC---------------------------------------------------------ccccceEEEecCCCEEEE
Q psy14331 97 GAPPP---------------------------------------------------------RCSHQMVALSADKGQLWM 119 (265)
Q Consensus 97 ~~p~~---------------------------------------------------------r~~~~~~~~~~~~~~iyv 119 (265)
+|+.. +..++++.++..+++||+
T Consensus 336 p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v 415 (656)
T 1k3i_A 336 PMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT 415 (656)
T ss_dssp GGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred ccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEE
Confidence 33322 223444443345899999
Q ss_pred EcCcccCCCccccccCC---ceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCC--CccccCCceEE
Q psy14331 120 FGGEFSSASESQFHHYK---DLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNL--REAKYYNDVHI 193 (265)
Q Consensus 120 ~GG~~~~~~~~~~~~~~---~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~--~~~~~~~~v~~ 193 (265)
+||....... ..++ ++++||+.+++|..+....+|.+|..|+++.+ +++|||+||.+... ......+++++
T Consensus 416 ~GG~~~~~~~---~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ 492 (656)
T 1k3i_A 416 FGGSPDYQDS---DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEI 492 (656)
T ss_dssp ECCBSSSSSS---BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEE
T ss_pred EeCCCCCCCC---CcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEE
Confidence 9997432211 1234 78899999999999862234789999998888 99999999975321 11245789999
Q ss_pred EEcCCCceEEeccCCCCCCCCCCceEEEe-CCCeEEEEcCcc
Q psy14331 194 FDLETYAWKKIEPLGAGPAPRSGCQMAAT-PDGKILISGGYS 234 (265)
Q Consensus 194 y~~~~~~W~~~~~~~~~p~~~~~~~~~~~-~~~~iyi~GG~~ 234 (265)
||+.+++|+.+.. +|.+|..|+++++ .+++|||+||..
T Consensus 493 ydp~t~~W~~~~~---~~~~R~~hs~a~ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 493 YVPEQDTFYKQNP---NSIVRVYHSISLLLPDGRVFNGGGGL 531 (656)
T ss_dssp EEGGGTEEEECCC---CSSCCCTTEEEEECTTSCEEEEECCC
T ss_pred EcCCCCceeecCC---CCCccccccHhhcCCCcEEEecCCCC
Confidence 9999999999887 4889999986554 488999999964
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.92 E-value=0.047 Score=42.31 Aligned_cols=110 Identities=16% Similarity=0.207 Sum_probs=70.8
Q ss_pred ceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCccccceEEEecCCCEEEEEcCccc
Q psy14331 50 NFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 50 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
.+.+.+. ++.||+-.|. .+ -+.+.++|+ -...-+++..-++.+.+.. +++||+....
T Consensus 23 tqGL~~~--~~~LyestG~--~g----------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~---~~~ly~ltw~-- 83 (243)
T 3mbr_X 23 TEGLFYL--RGHLYESTGE--TG----------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAW---RDRLIQLTWR-- 83 (243)
T ss_dssp EEEEEEE--TTEEEEEECC--TT----------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEE---TTEEEEEESS--
T ss_pred cccEEEE--CCEEEEECCC--CC----------CceEEEEECCCCCEEEEEeCCCCcceeEEEEe---CCEEEEEEee--
Confidence 3456664 7999999883 22 257888888 2222234433344544544 8999998653
Q ss_pred CCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCce
Q psy14331 126 SASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAW 201 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W 201 (265)
.+.+++||+.+.+-.. ... .+..+.+++..++.+|+.-| .+.|+.+|+.+.+-
T Consensus 84 ---------~~~v~v~D~~tl~~~~--ti~--~~~~Gwglt~dg~~L~vSdg----------s~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 84 ---------NHEGFVYDLATLTPRA--RFR--YPGEGWALTSDDSHLYMSDG----------TAVIRKLDPDTLQQ 136 (243)
T ss_dssp ---------SSEEEEEETTTTEEEE--EEE--CSSCCCEEEECSSCEEEECS----------SSEEEEECTTTCCE
T ss_pred ---------CCEEEEEECCcCcEEE--EEe--CCCCceEEeeCCCEEEEECC----------CCeEEEEeCCCCeE
Confidence 4679999998875432 221 22345566666778888765 35799999998654
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.85 E-value=0.13 Score=41.61 Aligned_cols=165 Identities=12% Similarity=0.030 Sum_probs=89.3
Q ss_pred HHHHhhcccceEEEecc----CCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCC
Q psy14331 26 DIEAEEKRKNKVIEKVV----PEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAP 99 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~----~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p 99 (265)
.+..+|+.+.+...... ..+.....+.+++ +++++|+.... .+.+.++|+ ......++
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~--------------~~~v~viD~~t~~~~~~i~ 81 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNN--------------SHVIFAIDINTFKEVGRIT 81 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGG--------------GTEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcC--------------CCEEEEEECcccEEEEEcC
Confidence 35567777777654221 1122233455555 48999998651 357888888 11111111
Q ss_pred CCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCC-C-CCCcCceEEEECCEEEEEcC
Q psy14331 100 PPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDT-P-PSRSGHRMIALKKHLVVFGG 177 (265)
Q Consensus 100 ~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-p-~~~~~~~~~~~~~~iyv~GG 177 (265)
.....+..+... ++++|+.... .+.+.++|+.+++-...-.... . ....-..++..++++|+..-
T Consensus 82 ~~~~p~~i~~~~--~g~lyv~~~~-----------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~ 148 (328)
T 3dsm_A 82 GFTSPRYIHFLS--DEKAYVTQIW-----------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW 148 (328)
T ss_dssp CCSSEEEEEEEE--TTEEEEEEBS-----------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC
T ss_pred CCCCCcEEEEeC--CCeEEEEECC-----------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC
Confidence 112223333323 6799998642 3568999999887543222210 0 00022344557889999742
Q ss_pred ccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcC
Q psy14331 178 FHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGG 232 (265)
Q Consensus 178 ~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG 232 (265)
. ..+.|.++|+.+.+....-..+..| +.++.-.++++|+...
T Consensus 149 -~-------~~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 149 -S-------YQNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITD 190 (328)
T ss_dssp -T-------TCCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBC
T ss_pred -C-------CCCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEEC
Confidence 0 1357999999998765433322112 2334444678887753
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.70 E-value=0.12 Score=40.01 Aligned_cols=92 Identities=18% Similarity=0.333 Sum_probs=63.3
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++.||+..|... .+.+.++|+++++-..-... |...++.+++..+++||+.... .+.+++
T Consensus 30 ~~~LyestG~~g---------~S~v~~vD~~tgkv~~~~~l--~~~~fgeGi~~~~~~ly~ltw~---------~~~v~v 89 (243)
T 3mbr_X 30 RGHLYESTGETG---------RSSVRKVDLETGRILQRAEV--PPPYFGAGIVAWRDRLIQLTWR---------NHEGFV 89 (243)
T ss_dssp TTEEEEEECCTT---------SCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESS---------SSEEEE
T ss_pred CCEEEEECCCCC---------CceEEEEECCCCCEEEEEeC--CCCcceeEEEEeCCEEEEEEee---------CCEEEE
Confidence 789999988642 35799999999976554433 3455666778889999998643 367999
Q ss_pred EEcCCCceE-EeccCCCCCCCCCCceEEEeCCCeEEEEcC
Q psy14331 194 FDLETYAWK-KIEPLGAGPAPRSGCQMAATPDGKILISGG 232 (265)
Q Consensus 194 y~~~~~~W~-~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG 232 (265)
||+.+.+-. +++. +..+.+++. .++.+|+.-|
T Consensus 90 ~D~~tl~~~~ti~~------~~~Gwglt~-dg~~L~vSdg 122 (243)
T 3mbr_X 90 YDLATLTPRARFRY------PGEGWALTS-DDSHLYMSDG 122 (243)
T ss_dssp EETTTTEEEEEEEC------SSCCCEEEE-CSSCEEEECS
T ss_pred EECCcCcEEEEEeC------CCCceEEee-CCCEEEEECC
Confidence 999886533 3332 234556553 3667888866
No 22
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.52 E-value=0.049 Score=42.78 Aligned_cols=105 Identities=11% Similarity=0.066 Sum_probs=66.4
Q ss_pred eeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-----eecCCCCCCCccccceEEEecCCCEEEEEcCccc
Q psy14331 51 FSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 51 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
+.+.+ .++.||+..|. ...+.++|+ -... ++..-+....+.. +++||+....
T Consensus 58 qGL~~--~~~~Ly~stG~--------------~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~---g~~Ly~ltw~-- 114 (268)
T 3nok_A 58 QGLVF--HQGHFFESTGH--------------QGTLRQLSLESAQPVWME--RLGNIFAEGLASD---GERLYQLTWT-- 114 (268)
T ss_dssp EEEEE--ETTEEEEEETT--------------TTEEEECCSSCSSCSEEE--ECTTCCEEEEEEC---SSCEEEEESS--
T ss_pred ceEEE--ECCEEEEEcCC--------------CCEEEEEECCCCcEEeEE--CCCCcceeEEEEe---CCEEEEEEcc--
Confidence 45555 48999999883 234677777 1111 3322233333333 8899998553
Q ss_pred CCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCce
Q psy14331 126 SASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAW 201 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W 201 (265)
.+.+++||+++.+-..- .. .+-.+.+++..++.+|+.-| .+.|+.+|+.+.+-
T Consensus 115 ---------~~~v~V~D~~Tl~~~~t--i~--~~~eGwGLt~Dg~~L~vSdG----------s~~l~~iDp~T~~v 167 (268)
T 3nok_A 115 ---------EGLLFTWSGMPPQRERT--TR--YSGEGWGLCYWNGKLVRSDG----------GTMLTFHEPDGFAL 167 (268)
T ss_dssp ---------SCEEEEEETTTTEEEEE--EE--CSSCCCCEEEETTEEEEECS----------SSEEEEECTTTCCE
T ss_pred ---------CCEEEEEECCcCcEEEE--Ee--CCCceeEEecCCCEEEEECC----------CCEEEEEcCCCCeE
Confidence 46799999988754322 21 22234567777889999865 35799999998654
No 23
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.13 E-value=0.39 Score=38.46 Aligned_cols=166 Identities=8% Similarity=0.045 Sum_probs=81.7
Q ss_pred HHHHhhcccceEEEeccC--CCC-----CCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCC
Q psy14331 26 DIEAEEKRKNKVIEKVVP--EPT-----RRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAP 96 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~--~p~-----~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~ 96 (265)
.+..+|..+.+-...... ... +...+.+++.++++.+|+.+.. . -..++.+|+ .....
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~-----------~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG--K-----------ESVIWVVDGGNIKLKT 178 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES--S-----------SCEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC--C-----------CceEEEEcCCCCceEE
Confidence 466778777664331221 111 1113456666678888887630 1 246888888 11111
Q ss_pred CCC-CCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCc-eEEEE--CCEE
Q psy14331 97 GAP-PPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGH-RMIAL--KKHL 172 (265)
Q Consensus 97 ~~p-~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~-~~~~~--~~~i 172 (265)
.++ .....+..+ +...++.||+... .+.+..+|+.+++-..........+.... .++.. ++.+
T Consensus 179 ~~~~~~~~~~~~~-~s~dg~~l~~~~~------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 179 AIQNTGKMSTGLA-LDSEGKRLYTTNA------------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp EECCCCTTCCCCE-EETTTTEEEEECT------------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred EecCCCCccceEE-ECCCCCEEEEEcC------------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEE
Confidence 111 111122232 3334566777643 24588999988764333222111112211 23333 4567
Q ss_pred EEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCC-eEEEEcC
Q psy14331 173 VVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDG-KILISGG 232 (265)
Q Consensus 173 yv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~-~iyi~GG 232 (265)
|+.... .+.++.||+.+.+....-.. +.+ ..++...++ .+|+.+.
T Consensus 246 ~~~~~~---------~~~v~~~d~~~~~~~~~~~~---~~~---~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 246 FITDSK---------AAEVLVVDTRNGNILAKVAA---PES---LAVLFNPARNEAYVTHR 291 (353)
T ss_dssp EEEESS---------SSEEEEEETTTCCEEEEEEC---SSC---CCEEEETTTTEEEEEET
T ss_pred EEEeCC---------CCEEEEEECCCCcEEEEEEc---CCC---ceEEECCCCCEEEEEEC
Confidence 775432 35799999988775444332 222 223333344 4777654
No 24
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.08 E-value=0.27 Score=38.44 Aligned_cols=98 Identities=10% Similarity=0.063 Sum_probs=63.9
Q ss_pred ceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCcc
Q psy14331 106 QMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREA 185 (265)
Q Consensus 106 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 185 (265)
....+. ++.||+..|... .+.+.++|+++++-..--.. +..-++.+++..+++||+....
T Consensus 46 qGL~~~--~~~LyestG~~g---------~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw~------- 105 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNG---------RSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTWK------- 105 (262)
T ss_dssp EEEEEE--TTEEEEEEEETT---------EEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESS-------
T ss_pred ceEEEE--CCEEEEECCCCC---------CceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEee-------
Confidence 334443 789999998632 25688999999876544333 3444556678889999998653
Q ss_pred ccCCceEEEEcCCCceE-EeccCCCCCCCCCCceEEEeCCCeEEEEcC
Q psy14331 186 KYYNDVHIFDLETYAWK-KIEPLGAGPAPRSGCQMAATPDGKILISGG 232 (265)
Q Consensus 186 ~~~~~v~~y~~~~~~W~-~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG 232 (265)
.+.+++||+.+.+-. +++. +..+.+++ ..++.+|+.-|
T Consensus 106 --~~~v~v~D~~t~~~~~ti~~------~~eG~glt-~dg~~L~~SdG 144 (262)
T 3nol_A 106 --NGLGFVWNIRNLRQVRSFNY------DGEGWGLT-HNDQYLIMSDG 144 (262)
T ss_dssp --SSEEEEEETTTCCEEEEEEC------SSCCCCEE-ECSSCEEECCS
T ss_pred --CCEEEEEECccCcEEEEEEC------CCCceEEe-cCCCEEEEECC
Confidence 367999999886543 3333 12345544 33567887765
No 25
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.03 E-value=0.39 Score=37.57 Aligned_cols=135 Identities=11% Similarity=-0.009 Sum_probs=80.3
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCCCCcc
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRC 103 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~ 103 (265)
.+..+|+.+.+-.. ..+++....+..++.. +++||+.... .+.+++||+ -......+.+-.
T Consensus 66 ~v~~vD~~Tgkv~~-~~~l~~~~FgeGit~~--g~~ly~ltw~--------------~~~v~v~D~~t~~~~~ti~~~~e 128 (262)
T 3nol_A 66 SIRKVDIESGKTLQ-QIELGKRYFGEGISDW--KDKIVGLTWK--------------NGLGFVWNIRNLRQVRSFNYDGE 128 (262)
T ss_dssp EEEEECTTTCCEEE-EEECCTTCCEEEEEEE--TTEEEEEESS--------------SSEEEEEETTTCCEEEEEECSSC
T ss_pred eEEEEECCCCcEEE-EEecCCccceeEEEEe--CCEEEEEEee--------------CCEEEEEECccCcEEEEEECCCC
Confidence 46788998888765 3344444445556664 9999998652 468899998 222223333334
Q ss_pred ccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEE-EEecCCCCCCCcCc-eEEEECCEEEEEcCccCC
Q psy14331 104 SHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWE-KIVCKDTPPSRSGH-RMIALKKHLVVFGGFHDN 181 (265)
Q Consensus 104 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~~~p~~~~~~-~~~~~~~~iyv~GG~~~~ 181 (265)
+.+.+ . .++.||+.-| .+.+..+|+++.+-. .++....+.+.... .+...+++||+-- +
T Consensus 129 G~glt-~--dg~~L~~SdG------------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~-w--- 189 (262)
T 3nol_A 129 GWGLT-H--NDQYLIMSDG------------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV-W--- 189 (262)
T ss_dssp CCCEE-E--CSSCEEECCS------------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE-T---
T ss_pred ceEEe-c--CCCEEEEECC------------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE-c---
Confidence 44444 2 2677888765 356999999987533 23221111121111 2344588888632 1
Q ss_pred CCccccCCceEEEEcCCCce
Q psy14331 182 LREAKYYNDVHIFDLETYAW 201 (265)
Q Consensus 182 ~~~~~~~~~v~~y~~~~~~W 201 (265)
..++|.+.|+.+.+=
T Consensus 190 -----~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 190 -----QTNKIVRIDPETGKV 204 (262)
T ss_dssp -----TSSEEEEECTTTCBE
T ss_pred -----cCCeEEEEECCCCcE
Confidence 146899999999764
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.97 E-value=0.49 Score=38.12 Aligned_cols=169 Identities=8% Similarity=-0.041 Sum_probs=85.9
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-------eecCCCC
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-------FVSAPGA 98 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-------w~~~~~~ 98 (265)
.+..+|+.+.+....... ....+.+++.+ ++++|+.... .+.+.++|+ ....+..
T Consensus 65 ~v~viD~~t~~~~~~i~~---~~~p~~i~~~~-~g~lyv~~~~--------------~~~v~~iD~~t~~~~~~i~~g~~ 126 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRITG---FTSPRYIHFLS-DEKAYVTQIW--------------DYRIFIINPKTYEITGYIECPDM 126 (328)
T ss_dssp EEEEEETTTCCEEEEEEC---CSSEEEEEEEE-TTEEEEEEBS--------------CSEEEEEETTTTEEEEEEECTTC
T ss_pred EEEEEECcccEEEEEcCC---CCCCcEEEEeC-CCeEEEEECC--------------CCeEEEEECCCCeEEEEEEcCCc
Confidence 356677777665332322 22334444433 5599998631 367888888 1122221
Q ss_pred CCC-ccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEE-ECCEEEEEc
Q psy14331 99 PPP-RCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIA-LKKHLVVFG 176 (265)
Q Consensus 99 p~~-r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~-~~~~iyv~G 176 (265)
... ...+..+. . +++||+..-. ..+.+.++|+.+++....-... ..+ +.++. -++++|+..
T Consensus 127 ~~~~~~p~~i~~-~--~~~lyv~~~~----------~~~~v~viD~~t~~~~~~i~~g-~~p---~~i~~~~dG~l~v~~ 189 (328)
T 3dsm_A 127 DMESGSTEQMVQ-Y--GKYVYVNCWS----------YQNRILKIDTETDKVVDELTIG-IQP---TSLVMDKYNKMWTIT 189 (328)
T ss_dssp CTTTCBCCCEEE-E--TTEEEEEECT----------TCCEEEEEETTTTEEEEEEECS-SCB---CCCEECTTSEEEEEB
T ss_pred cccCCCcceEEE-E--CCEEEEEcCC----------CCCEEEEEECCCCeEEEEEEcC-CCc---cceEEcCCCCEEEEE
Confidence 100 02233333 3 8999998421 1356999999998765432222 122 22333 367888865
Q ss_pred CccCCCCc-cccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeC-CCeEEEEcC
Q psy14331 177 GFHDNLRE-AKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATP-DGKILISGG 232 (265)
Q Consensus 177 G~~~~~~~-~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~-~~~iyi~GG 232 (265)
-....... ..-.+.|+++|+.+.+....-.. +....-..++.-. ++.+|+..+
T Consensus 190 ~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~---~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 190 DGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF---KLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp CCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC---CTTCCCEEEEECTTSCEEEEESS
T ss_pred CCCccCCccccCCceEEEEECCCCeEEEEEec---CCCCCceeEEEecCCCEEEEEcc
Confidence 32211100 00136799999998876543332 2222223343332 456777644
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.91 E-value=0.56 Score=38.33 Aligned_cols=109 Identities=8% Similarity=0.133 Sum_probs=62.3
Q ss_pred eeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCC------CccccceEEEecCCCEEEE
Q psy14331 52 SFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPP------PRCSHQMVALSADKGQLWM 119 (265)
Q Consensus 52 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~------~r~~~~~~~~~~~~~~iyv 119 (265)
+.++ .++.||+... ...+++||. |........ .....+...+ .++.||+
T Consensus 48 ~p~v--~~~~v~~~~~---------------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v 108 (376)
T 3q7m_A 48 HPAL--ADNVVYAADR---------------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYI 108 (376)
T ss_dssp CCEE--ETTEEEEECT---------------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEE
T ss_pred ccEE--ECCEEEEEcC---------------CCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEE
Confidence 3444 3899998765 346777776 554322110 1111122223 2788888
Q ss_pred EcCcccCCCccccccCCceeEEEcCCCc--EEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcC
Q psy14331 120 FGGEFSSASESQFHHYKDLWVFRMGEKK--WEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLE 197 (265)
Q Consensus 120 ~GG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~ 197 (265)
... ...++++|..+++ |+.-... . .....+..++.+|+... ...++.+|+.
T Consensus 109 ~~~------------~g~l~a~d~~tG~~~W~~~~~~----~-~~~~p~~~~~~v~v~~~----------~g~l~~~d~~ 161 (376)
T 3q7m_A 109 GSE------------KAQVYALNTSDGTVAWQTKVAG----E-ALSRPVVSDGLVLIHTS----------NGQLQALNEA 161 (376)
T ss_dssp EET------------TSEEEEEETTTCCEEEEEECSS----C-CCSCCEEETTEEEEECT----------TSEEEEEETT
T ss_pred EcC------------CCEEEEEECCCCCEEEEEeCCC----c-eEcCCEEECCEEEEEcC----------CCeEEEEECC
Confidence 643 2468999998764 7653221 1 12233455788877443 2469999998
Q ss_pred CCc--eEEecc
Q psy14331 198 TYA--WKKIEP 206 (265)
Q Consensus 198 ~~~--W~~~~~ 206 (265)
+.+ |+.-..
T Consensus 162 tG~~~W~~~~~ 172 (376)
T 3q7m_A 162 DGAVKWTVNLD 172 (376)
T ss_dssp TCCEEEEEECC
T ss_pred CCcEEEEEeCC
Confidence 764 876544
No 28
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.70 E-value=0.62 Score=37.27 Aligned_cols=160 Identities=13% Similarity=0.072 Sum_probs=84.5
Q ss_pred HHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCC
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPP 100 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~ 100 (265)
++.+|..+.+-..... . .....+.+++.++++.+|+... -+.+..+|+ +........
T Consensus 166 i~~~d~~~~~~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~---------------~~~i~~~d~~~~~~~~~~~~~~~~ 228 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQ-N-TGKMSTGLALDSEGKRLYTTNA---------------DGELITIDTADNKILSRKKLLDDG 228 (353)
T ss_dssp EEEEETTTTEEEEEEC-C-CCTTCCCCEEETTTTEEEEECT---------------TSEEEEEETTTTEEEEEEECCCSS
T ss_pred EEEEcCCCCceEEEec-C-CCCccceEEECCCCCEEEEEcC---------------CCeEEEEECCCCeEEEEEEcCCCC
Confidence 6667777666543222 1 1222345566667888888755 356778887 111111111
Q ss_pred CccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCc
Q psy14331 101 PRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGF 178 (265)
Q Consensus 101 ~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~ 178 (265)
+......+.+...++.||+.... .+.+.++|+.+++....-... .+ ..++.. ++.+|+....
T Consensus 229 ~~~~~~~~~~s~dg~~l~~~~~~-----------~~~v~~~d~~~~~~~~~~~~~--~~---~~~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 229 KEHFFINISLDTARQRAFITDSK-----------AAEVLVVDTRNGNILAKVAAP--ES---LAVLFNPARNEAYVTHRQ 292 (353)
T ss_dssp SCCCEEEEEEETTTTEEEEEESS-----------SSEEEEEETTTCCEEEEEECS--SC---CCEEEETTTTEEEEEETT
T ss_pred CCcccceEEECCCCCEEEEEeCC-----------CCEEEEEECCCCcEEEEEEcC--CC---ceEEECCCCCEEEEEECC
Confidence 22222234454456678777532 367999999888754433332 22 123332 4467776543
Q ss_pred cCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCe-EEEEcCc
Q psy14331 179 HDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGK-ILISGGY 233 (265)
Q Consensus 179 ~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~-iyi~GG~ 233 (265)
.+.|..+|+.+.+....-..+ ..-..++...+++ +|+....
T Consensus 293 ---------~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 293 ---------AGKVSVIDAKSYKVVKTFDTP-----THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---------TTEEEEEETTTTEEEEEEECC-----SEEEEEEECTTSCEEEEEEEC
T ss_pred ---------CCeEEEEECCCCeEEEEEecC-----CCCCeEEEcCCCCEEEEEEcc
Confidence 256899999887654433321 1223344444555 7776543
No 29
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.66 E-value=0.16 Score=41.59 Aligned_cols=138 Identities=17% Similarity=0.125 Sum_probs=72.1
Q ss_pred HHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCCCCccc
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRCS 104 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~~ 104 (265)
+..+|..+.+...... ....-.++++.++++.+|+.++. -..+..+|+ -.....++... .
T Consensus 14 v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~--------------d~~i~v~d~~~~~~~~~~~~~~-~ 75 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIP---VGSNPMGAVISPDGTKVYVANAH--------------SNDVSIIDTATNNVIATVPAGS-S 75 (391)
T ss_dssp EEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEEGG--------------GTEEEEEETTTTEEEEEEECSS-S
T ss_pred EEEEECCCCeEEEEee---cCCCcceEEECCCCCEEEEECCC--------------CCeEEEEECCCCeEEEEEECCC-C
Confidence 5566766665543222 11223455666677778887752 346777777 11111111111 2
Q ss_pred cceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCC
Q psy14331 105 HQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNL 182 (265)
Q Consensus 105 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~ 182 (265)
...+.+...++.||+.+.. -..+.++|+.+++-...-... ....+++.. ++.+|+.++.
T Consensus 76 v~~~~~spdg~~l~~~~~~-----------~~~v~v~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~---- 136 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMA-----------SSTLSVIDTTSNTVAGTVKTG----KSPLGLALSPDGKKLYVTNNG---- 136 (391)
T ss_dssp EEEEEECTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEEECS----SSEEEEEECTTSSEEEEEETT----
T ss_pred ccceEECCCCCEEEEEECC-----------CCEEEEEECCCCeEEEEEeCC----CCcceEEECCCCCEEEEEeCC----
Confidence 2233343345567666542 256899999988654433221 111233332 3467776653
Q ss_pred CccccCCceEEEEcCCCceEEecc
Q psy14331 183 REAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 183 ~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
.+.|..+|+.+.+....-.
T Consensus 137 -----~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 137 -----DKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp -----TTEEEEEETTTTEEEEEEE
T ss_pred -----CCEEEEEECCCCcEEEEEe
Confidence 2468999998876654433
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.43 E-value=0.4 Score=37.59 Aligned_cols=89 Identities=10% Similarity=0.038 Sum_probs=59.2
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++.||+..|.. ..+.++|+++++-..-- . |..-++.+++..+++||+.... .+.+++
T Consensus 64 ~~~Ly~stG~~-----------g~v~~iD~~Tgkv~~~~-l--~~~~FgeGit~~g~~Ly~ltw~---------~~~v~V 120 (268)
T 3nok_A 64 QGHFFESTGHQ-----------GTLRQLSLESAQPVWME-R--LGNIFAEGLASDGERLYQLTWT---------EGLLFT 120 (268)
T ss_dssp TTEEEEEETTT-----------TEEEECCSSCSSCSEEE-E--CTTCCEEEEEECSSCEEEEESS---------SCEEEE
T ss_pred CCEEEEEcCCC-----------CEEEEEECCCCcEEeEE-C--CCCcceeEEEEeCCEEEEEEcc---------CCEEEE
Confidence 78999999863 34889999988644332 2 3344555677789999998553 367999
Q ss_pred EEcCCCceE-EeccCCCCCCCCCCceEEEeCCCeEEEEcC
Q psy14331 194 FDLETYAWK-KIEPLGAGPAPRSGCQMAATPDGKILISGG 232 (265)
Q Consensus 194 y~~~~~~W~-~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG 232 (265)
||+.+.+-. +++. +..+.+++.- ++.+|+.-|
T Consensus 121 ~D~~Tl~~~~ti~~------~~eGwGLt~D-g~~L~vSdG 153 (268)
T 3nok_A 121 WSGMPPQRERTTRY------SGEGWGLCYW-NGKLVRSDG 153 (268)
T ss_dssp EETTTTEEEEEEEC------SSCCCCEEEE-TTEEEEECS
T ss_pred EECCcCcEEEEEeC------CCceeEEecC-CCEEEEECC
Confidence 999886543 3333 1234555533 668888866
No 31
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.91 E-value=0.34 Score=39.62 Aligned_cols=137 Identities=18% Similarity=0.110 Sum_probs=71.6
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCCCCcc
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRC 103 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~ 103 (265)
.+..+|..+.+...... .+ ..-..+++.++++.||+.+.. -..+.++|+ -.....+.....
T Consensus 55 ~i~v~d~~~~~~~~~~~-~~--~~v~~~~~spdg~~l~~~~~~--------------~~~v~v~d~~~~~~~~~~~~~~~ 117 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVP-AG--SSPQGVAVSPDGKQVYVTNMA--------------SSTLSVIDTTSNTVAGTVKTGKS 117 (391)
T ss_dssp EEEEEETTTTEEEEEEE-CS--SSEEEEEECTTSSEEEEEETT--------------TTEEEEEETTTTEEEEEEECSSS
T ss_pred eEEEEECCCCeEEEEEE-CC--CCccceEECCCCCEEEEEECC--------------CCEEEEEECCCCeEEEEEeCCCC
Confidence 35667776666544221 11 133445565667778777651 256788887 111111111111
Q ss_pred ccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCC
Q psy14331 104 SHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDN 181 (265)
Q Consensus 104 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~ 181 (265)
...+.+...++.||+.++. -+.+..+|+.+++....-... ..-..++.. ++.+|+.++.
T Consensus 118 -~~~~~~s~dg~~l~~~~~~-----------~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~~~--- 178 (391)
T 1l0q_A 118 -PLGLALSPDGKKLYVTNNG-----------DKTVSVINTVTKAVINTVSVG----RSPKGIAVTPDGTKVYVANFD--- 178 (391)
T ss_dssp -EEEEEECTTSSEEEEEETT-----------TTEEEEEETTTTEEEEEEECC----SSEEEEEECTTSSEEEEEETT---
T ss_pred -cceEEECCCCCEEEEEeCC-----------CCEEEEEECCCCcEEEEEecC----CCcceEEECCCCCEEEEEeCC---
Confidence 1233343344567777653 256889999888765443221 111222222 3467776653
Q ss_pred CCccccCCceEEEEcCCCceEEe
Q psy14331 182 LREAKYYNDVHIFDLETYAWKKI 204 (265)
Q Consensus 182 ~~~~~~~~~v~~y~~~~~~W~~~ 204 (265)
-..|..+|+.+.+-...
T Consensus 179 ------~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 179 ------SMSISVIDTVTNSVIDT 195 (391)
T ss_dssp ------TTEEEEEETTTTEEEEE
T ss_pred ------CCEEEEEECCCCeEEEE
Confidence 24688999988765433
No 32
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.76 E-value=1.2 Score=35.24 Aligned_cols=122 Identities=13% Similarity=0.116 Sum_probs=58.4
Q ss_pred ceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-----eec----CCCCCCCccccceEEEecCCCEEEEE
Q psy14331 50 NFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-----FVS----APGAPPPRCSHQMVALSADKGQLWMF 120 (265)
Q Consensus 50 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-----w~~----~~~~p~~r~~~~~~~~~~~~~~iyv~ 120 (265)
.+.+++.++++.+|+.+.. -..+..||+ ... ....+... ....+.+...++.+|+.
T Consensus 131 ~~~~~~s~dg~~l~~~~~~--------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~ 195 (343)
T 1ri6_A 131 CHSANISPDNRTLWVPALK--------------QDRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCV 195 (343)
T ss_dssp BCCCEECTTSSEEEEEEGG--------------GTEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEE
T ss_pred ceEEEECCCCCEEEEecCC--------------CCEEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEE
Confidence 4456666667788877621 245666666 110 00111111 11123344444567777
Q ss_pred cCcccCCCccccccCCceeEEEcC--CCcEEEEecCC-CCCC---CcCceEEEE---CCEEEEEcCccCCCCccccCCce
Q psy14331 121 GGEFSSASESQFHHYKDLWVFRMG--EKKWEKIVCKD-TPPS---RSGHRMIAL---KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 121 GG~~~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~~-~p~~---~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
+.. .+.+..||.. ++++....... .|.. ........+ ++.+|+.+.. .+.+
T Consensus 196 ~~~-----------~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~---------~~~i 255 (343)
T 1ri6_A 196 NEL-----------NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT---------ASLI 255 (343)
T ss_dssp ETT-----------TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT---------TTEE
T ss_pred eCC-----------CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC---------CCEE
Confidence 542 2457788874 45544332211 1121 111112233 3467665432 2467
Q ss_pred EEEEcC--CCceEEecc
Q psy14331 192 HIFDLE--TYAWKKIEP 206 (265)
Q Consensus 192 ~~y~~~--~~~W~~~~~ 206 (265)
..||+. +.+++.+..
T Consensus 256 ~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 256 TVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp EEEEECTTSCCEEEEEE
T ss_pred EEEEEcCCCCceEEeee
Confidence 888887 556666654
No 33
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.53 E-value=1.3 Score=34.68 Aligned_cols=93 Identities=20% Similarity=0.178 Sum_probs=57.8
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++.||+..|... .+.+.++|+.+++-...-+. +...+..+++..++++|+..-. .+.+.+
T Consensus 31 dg~Lyvstg~~~---------~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~~g~~lyv~t~~---------~~~v~v 90 (266)
T 2iwa_A 31 NDTLFESTGLYG---------RSSVRQVALQTGKVENIHKM--DDSYFGEGLTLLNEKLYQVVWL---------KNIGFI 90 (266)
T ss_dssp TTEEEEEECSTT---------TCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEETT---------CSEEEE
T ss_pred CCeEEEECCCCC---------CCEEEEEECCCCCEEEEEec--CCCcceEEEEEeCCEEEEEEec---------CCEEEE
Confidence 389999877421 36799999999875543333 2333445667778899998643 357899
Q ss_pred EEcCCCceEEeccCCCCCCC-CCCceEEEeCCCeEEEEcC
Q psy14331 194 FDLETYAWKKIEPLGAGPAP-RSGCQMAATPDGKILISGG 232 (265)
Q Consensus 194 y~~~~~~W~~~~~~~~~p~~-~~~~~~~~~~~~~iyi~GG 232 (265)
||+.+.+= +... |.+ ..+.+++ ..++++|+.-|
T Consensus 91 iD~~t~~v--~~~i---~~g~~~g~glt-~Dg~~l~vs~g 124 (266)
T 2iwa_A 91 YDRRTLSN--IKNF---THQMKDGWGLA-TDGKILYGSDG 124 (266)
T ss_dssp EETTTTEE--EEEE---ECCSSSCCEEE-ECSSSEEEECS
T ss_pred EECCCCcE--EEEE---ECCCCCeEEEE-ECCCEEEEECC
Confidence 99987543 2221 111 2234443 33567888765
No 34
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.52 E-value=1.3 Score=34.68 Aligned_cols=112 Identities=13% Similarity=0.019 Sum_probs=65.2
Q ss_pred ceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCccccceEEEecCCCEEEEEcCccc
Q psy14331 50 NFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 50 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
.+.+.+.+ ++.||+..|. .+ .+.+..+|+ -...-+++........+.. +++||+..-.
T Consensus 23 ~~Gl~~~~-dg~Lyvstg~--~~----------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~---g~~lyv~t~~-- 84 (266)
T 2iwa_A 23 TQGLVYAE-NDTLFESTGL--YG----------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLL---NEKLYQVVWL-- 84 (266)
T ss_dssp EEEEEECS-TTEEEEEECS--TT----------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEE---TTEEEEEETT--
T ss_pred cccEEEeC-CCeEEEECCC--CC----------CCEEEEEECCCCCEEEEEecCCCcceEEEEEe---CCEEEEEEec--
Confidence 36677653 3799998772 11 367888998 1111112222232333333 7899999543
Q ss_pred CCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCce
Q psy14331 126 SASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAW 201 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W 201 (265)
.+.+++||+.+.+=.. ..+.+. -.+.+++..++.+|+.-| .+.++.+|+.+.+-
T Consensus 85 ---------~~~v~viD~~t~~v~~--~i~~g~-~~g~glt~Dg~~l~vs~g----------s~~l~viD~~t~~v 138 (266)
T 2iwa_A 85 ---------KNIGFIYDRRTLSNIK--NFTHQM-KDGWGLATDGKILYGSDG----------TSILYEIDPHTFKL 138 (266)
T ss_dssp ---------CSEEEEEETTTTEEEE--EEECCS-SSCCEEEECSSSEEEECS----------SSEEEEECTTTCCE
T ss_pred ---------CCEEEEEECCCCcEEE--EEECCC-CCeEEEEECCCEEEEECC----------CCeEEEEECCCCcE
Confidence 4679999998774322 221111 123345555678888654 35799999988653
No 35
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.37 E-value=1.7 Score=35.34 Aligned_cols=62 Identities=10% Similarity=0.259 Sum_probs=40.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCc--EEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKK--WEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+|+.+. ...+..+|+.+++ |+.- .. . ....+..++.+|+... ...+
T Consensus 239 ~~~v~~~~~------------~g~l~~~d~~tG~~~w~~~--~~--~---~~~~~~~~~~l~~~~~----------~g~l 289 (376)
T 3q7m_A 239 NGVVFALAY------------NGNLTALDLRSGQIMWKRE--LG--S---VNDFIVDGNRIYLVDQ----------NDRV 289 (376)
T ss_dssp TTEEEEECT------------TSCEEEEETTTCCEEEEEC--CC--C---EEEEEEETTEEEEEET----------TCCE
T ss_pred CCEEEEEec------------CcEEEEEECCCCcEEeecc--CC--C---CCCceEECCEEEEEcC----------CCeE
Confidence 788888652 2458899998764 6542 11 1 2245556888988653 2468
Q ss_pred EEEEcCCCc--eEEe
Q psy14331 192 HIFDLETYA--WKKI 204 (265)
Q Consensus 192 ~~y~~~~~~--W~~~ 204 (265)
+++|+.+.+ |+.-
T Consensus 290 ~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 290 MALTIDGGVTLWTQS 304 (376)
T ss_dssp EEEETTTCCEEEEEC
T ss_pred EEEECCCCcEEEeec
Confidence 999998765 7654
No 36
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.32 E-value=1.3 Score=36.83 Aligned_cols=165 Identities=13% Similarity=0.103 Sum_probs=80.8
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCC
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPP 101 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~ 101 (265)
.++.+|..+.+...+ ...+ ....+..+-|++..|++.+. .++ ...++.+|+ .......+
T Consensus 204 ~i~~~d~~tg~~~~l-~~~~--~~~~~~~~spdg~~la~~~~--~~g----------~~~i~~~d~~~~~~~~l~~~~-- 266 (415)
T 2hqs_A 204 ALVIQTLANGAVRQV-ASFP--RHNGAPAFSPDGSKLAFALS--KTG----------SLNLYVMDLASGQIRQVTDGR-- 266 (415)
T ss_dssp EEEEEETTTCCEEEE-ECCS--SCEEEEEECTTSSEEEEEEC--TTS----------SCEEEEEETTTCCEEECCCCS--
T ss_pred EEEEEECCCCcEEEe-ecCC--CcccCEEEcCCCCEEEEEEe--cCC----------CceEEEEECCCCCEEeCcCCC--
Confidence 355667666665442 2111 12334555566666775554 111 356888887 22222111
Q ss_pred ccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEE-ECCEEEEEcCccC
Q psy14331 102 RCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIA-LKKHLVVFGGFHD 180 (265)
Q Consensus 102 r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~-~~~~iyv~GG~~~ 180 (265)
...........+..|++.+... . ...++.+|+.+++-..+... ......++. -+++.+++++...
T Consensus 267 -~~~~~~~~spdg~~l~~~s~~~-g--------~~~i~~~d~~~~~~~~l~~~----~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 267 -SNNTEPTWFPDSQNLAFTSDQA-G--------RPQVYKVNINGGAPQRITWE----GSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp -SCEEEEEECTTSSEEEEEECTT-S--------SCEEEEEETTSSCCEECCCS----SSEEEEEEECTTSSEEEEEEECS
T ss_pred -CcccceEECCCCCEEEEEECCC-C--------CcEEEEEECCCCCEEEEecC----CCcccCeEECCCCCEEEEEECcC
Confidence 1122233333333454443221 1 34689999988765443221 111112222 1455455554322
Q ss_pred CCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCc
Q psy14331 181 NLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGY 233 (265)
Q Consensus 181 ~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~ 233 (265)
. ...|+.+|+.+.+...+... . .........+++.+++++.
T Consensus 333 g------~~~i~~~d~~~~~~~~l~~~---~---~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 333 G------QQHIAKQDLATGGVQVLSST---F---LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp S------CEEEEEEETTTCCEEECCCS---S---SCEEEEECTTSSEEEEEEE
T ss_pred C------ceEEEEEECCCCCEEEecCC---C---CcCCeEEcCCCCEEEEEEc
Confidence 1 24789999999887665542 1 2233334446776666654
No 37
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=93.90 E-value=2.4 Score=35.30 Aligned_cols=117 Identities=15% Similarity=0.216 Sum_probs=63.6
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCcc------c
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREA------K 186 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~------~ 186 (265)
.+++||+.-..+... .+-+.+.+-+.....|+.+.... .......-.+.+++.||+||-....+++. .
T Consensus 347 YdgvLyLtTRgt~~~-----~~GS~L~rs~d~Gq~w~slrfp~-nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~R 420 (670)
T 3ju4_A 347 YDGVLYLITRGTRGD-----RLGSSLHRSRDIGQTWESLRFPH-NVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDR 420 (670)
T ss_dssp ETTEEEEEEEESCTT-----SCCCEEEEESSTTSSCEEEECTT-CCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCC
T ss_pred hCCEEEEEecCcCCC-----CCcceeeeecccCCchhheeccc-cccccCCCcceeCCEEEEEeccccccccccCCCccc
Confidence 389999986443221 12355667777778899997542 11222234567899999999653322211 0
Q ss_pred ----cCCceE-E-----EEcCCCceEEeccC---CCCCCCCCCceEEEeCCCeEE-EEcCccc
Q psy14331 187 ----YYNDVH-I-----FDLETYAWKKIEPL---GAGPAPRSGCQMAATPDGKIL-ISGGYSK 235 (265)
Q Consensus 187 ----~~~~v~-~-----y~~~~~~W~~~~~~---~~~p~~~~~~~~~~~~~~~iy-i~GG~~~ 235 (265)
+-...+ + ++.+.-.|..+... +..-..-.+-+.+++.++.|| ||||.+.
T Consensus 421 Y~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~ 483 (670)
T 3ju4_A 421 YKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDH 483 (670)
T ss_dssp SSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCS
T ss_pred ccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCccc
Confidence 111111 1 22344568777652 111122233344566678765 8999764
No 38
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=93.58 E-value=1.7 Score=32.60 Aligned_cols=64 Identities=14% Similarity=0.215 Sum_probs=39.7
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEE-----Ee-cC-CCCCCCcCceEEEECCEEEEEcCccCCCCcc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEK-----IV-CK-DTPPSRSGHRMIALKKHLVVFGGFHDNLREA 185 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~-----~~-~~-~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 185 (265)
.++++|++-| +..|+||..+++-.. +. .. ..|. .-.++...++++|.|-|
T Consensus 126 ~~gk~yfFkG-------------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~--~iDaAf~~~g~~YfFkg-------- 182 (207)
T 1pex_A 126 DTGKTLLFSG-------------NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD--KVDAVYEKNGYIYFFNG-------- 182 (207)
T ss_dssp TTSEEEEEET-------------TEEEEEETTTTEECSSCCCBHHHHSTTSCS--CCSEEEEETTEEEEEET--------
T ss_pred CCCEEEEEeC-------------CEEEEEeCcCccccCCCCccHHHcCCCCCC--CccEEEEcCCcEEEEEC--------
Confidence 3589999977 458999987653211 00 01 1222 22345556899999977
Q ss_pred ccCCceEEEEcCCCceE
Q psy14331 186 KYYNDVHIFDLETYAWK 202 (265)
Q Consensus 186 ~~~~~v~~y~~~~~~W~ 202 (265)
+..|+||..+.+=.
T Consensus 183 ---~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 183 ---PIQFEYSIWSNRIV 196 (207)
T ss_dssp ---TEEEEEETTTTEEE
T ss_pred ---CEEEEEeCCccEEe
Confidence 46888988776543
No 39
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.47 E-value=1.5 Score=36.22 Aligned_cols=142 Identities=12% Similarity=0.085 Sum_probs=65.9
Q ss_pred HHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCCCCccc
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRCS 104 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~~ 104 (265)
+..+|..+.+...... .....-..+++.++++.+|+.++. -..+..+|+ -.....++....
T Consensus 193 v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~--------------~~~i~~~d~~~~~~~~~~~~~~~- 255 (433)
T 3bws_A 193 VHVFDLKTLAYKATVD--LTGKWSKILLYDPIRDLVYCSNWI--------------SEDISVIDRKTKLEIRKTDKIGL- 255 (433)
T ss_dssp EEEEETTTCCEEEEEE--CSSSSEEEEEEETTTTEEEEEETT--------------TTEEEEEETTTTEEEEECCCCSE-
T ss_pred EEEEECCCceEEEEEc--CCCCCeeEEEEcCCCCEEEEEecC--------------CCcEEEEECCCCcEEEEecCCCC-
Confidence 4556655544322111 112223345566677788887651 246778887 111111111112
Q ss_pred cceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCC
Q psy14331 105 HQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNL 182 (265)
Q Consensus 105 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~ 182 (265)
...+.+...++.|++. +....... ..-..+..||+.+++-....... . ....++.. ++.+|+.++.
T Consensus 256 ~~~~~~~~~g~~l~~~-~~~~~~~~---~~dg~i~~~d~~~~~~~~~~~~~--~--~~~~~~~~~~g~~l~~~~~~---- 323 (433)
T 3bws_A 256 PRGLLLSKDGKELYIA-QFSASNQE---SGGGRLGIYSMDKEKLIDTIGPP--G--NKRHIVSGNTENKIYVSDMC---- 323 (433)
T ss_dssp EEEEEECTTSSEEEEE-EEESCTTC---SCCEEEEEEETTTTEEEEEEEEE--E--CEEEEEECSSTTEEEEEETT----
T ss_pred ceEEEEcCCCCEEEEE-ECCCCccc---cCCCeEEEEECCCCcEEeeccCC--C--CcceEEECCCCCEEEEEecC----
Confidence 2233333333345544 43221100 00246889999887543332111 1 11122222 3467777654
Q ss_pred CccccCCceEEEEcCCCceE
Q psy14331 183 REAKYYNDVHIFDLETYAWK 202 (265)
Q Consensus 183 ~~~~~~~~v~~y~~~~~~W~ 202 (265)
-..+..||+.+.+-.
T Consensus 324 -----~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 324 -----CSKIEVYDLKEKKVQ 338 (433)
T ss_dssp -----TTEEEEEETTTTEEE
T ss_pred -----CCEEEEEECCCCcEE
Confidence 246889999876543
No 40
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.28 E-value=2.4 Score=33.40 Aligned_cols=74 Identities=12% Similarity=0.168 Sum_probs=36.8
Q ss_pred EecCCCEEEEEcCcccCCCccccccCCceeEEEcCC-CcEEEEe--cCCCCCCCcCceEEEE-C-CEEEEEcCccCCCCc
Q psy14331 110 LSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGE-KKWEKIV--CKDTPPSRSGHRMIAL-K-KHLVVFGGFHDNLRE 184 (265)
Q Consensus 110 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~-~~W~~~~--~~~~p~~~~~~~~~~~-~-~~iyv~GG~~~~~~~ 184 (265)
+...++.||+.+.. -..+.+||+.+ ++...+. ....+....-..++.. + +.+|+.+..
T Consensus 136 ~s~dg~~l~~~~~~-----------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~------ 198 (343)
T 1ri6_A 136 ISPDNRTLWVPALK-----------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL------ 198 (343)
T ss_dssp ECTTSSEEEEEEGG-----------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT------
T ss_pred ECCCCCEEEEecCC-----------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC------
Confidence 33334567776532 24588999887 6665433 1111111111122222 3 357776532
Q ss_pred cccCCceEEEEcC--CCceEE
Q psy14331 185 AKYYNDVHIFDLE--TYAWKK 203 (265)
Q Consensus 185 ~~~~~~v~~y~~~--~~~W~~ 203 (265)
.+.+..|++. +.+++.
T Consensus 199 ---~~~i~~~~~~~~~g~~~~ 216 (343)
T 1ri6_A 199 ---NSSVDVWELKDPHGNIEC 216 (343)
T ss_dssp ---TTEEEEEESSCTTSCCEE
T ss_pred ---CCEEEEEEecCCCCcEEE
Confidence 2467888884 455543
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.27 E-value=2.4 Score=33.29 Aligned_cols=92 Identities=11% Similarity=0.038 Sum_probs=47.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++..++.|+. -..+..||+.+.+-....... .+ -.+++.. ++..+++|+.+ ..+.
T Consensus 194 ~~~~l~~~~~-----------dg~i~~~d~~~~~~~~~~~~~--~~--v~~~~~s~~~~~l~~~~~~---------~~i~ 249 (337)
T 1gxr_A 194 DGTKLWTGGL-----------DNTVRSWDLREGRQLQQHDFT--SQ--IFSLGYCPTGEWLAVGMES---------SNVE 249 (337)
T ss_dssp TSSEEEEEET-----------TSEEEEEETTTTEEEEEEECS--SC--EEEEEECTTSSEEEEEETT---------SCEE
T ss_pred CCCEEEEEec-----------CCcEEEEECCCCceEeeecCC--Cc--eEEEEECCCCCEEEEEcCC---------CcEE
Confidence 4556666653 245889998877543332221 11 1122222 55666666542 3588
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.||+.+..-..+... ...-..+....++++++.|+.+
T Consensus 250 ~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 250 VLHVNKPDKYQLHLH-----ESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp EEETTSSCEEEECCC-----SSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCCeEEEcCC-----ccceeEEEECCCCCEEEEecCC
Confidence 899887654433321 1112233334456666666654
No 42
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.25 E-value=1.4 Score=35.27 Aligned_cols=145 Identities=9% Similarity=0.028 Sum_probs=66.2
Q ss_pred HHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCc
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPR 102 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r 102 (265)
++.+|..+.++..+.. .........+++-+ +++||+.+.. +. -..++.||+ ...........
T Consensus 20 v~~~d~~tg~~~~~~~-~~~~~~p~~~a~sp-dg~l~~~~~~---~~---------~~~v~~~~~~~g~~~~~~~~~~~~ 85 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGL-LAATQNPTYLALSA-KDCLYSVDKE---DD---------EGGIAAWQIDGQTAHKLNTVVAPG 85 (347)
T ss_dssp EEEEETTTTEEEEEEE-EEECSCCCCEEECT-TCEEEEEEEE---TT---------EEEEEEEEEETTEEEEEEEEEEES
T ss_pred EEEEcCCCCeEEEeee-eeccCCcceEEEcc-CCeEEEEEec---CC---------CceEEEEEecCCcEEEeeeeecCC
Confidence 5667777777655211 11112223344444 4457776541 11 246777777 22221111111
Q ss_pred cccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcC-CCcEEEEecCC----CCCCCc----CceEEEE-CCEE
Q psy14331 103 CSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMG-EKKWEKIVCKD----TPPSRS----GHRMIAL-KKHL 172 (265)
Q Consensus 103 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~~----~p~~~~----~~~~~~~-~~~i 172 (265)
.....+.+...++.||+.+.. ...+..|++. ++..+.+.... .|.+|. .+.++.. ++++
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~-----------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l 154 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYH-----------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRL 154 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETT-----------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCE
T ss_pred CCCEEEEECCCCCEEEEEeCC-----------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcE
Confidence 122233444445567776532 2456777774 33444332211 121111 1223322 5567
Q ss_pred EEEcCccCCCCccccCCceEEEEcC-CCceEEec
Q psy14331 173 VVFGGFHDNLREAKYYNDVHIFDLE-TYAWKKIE 205 (265)
Q Consensus 173 yv~GG~~~~~~~~~~~~~v~~y~~~-~~~W~~~~ 205 (265)
|+.+.. .+.+..|++. +.+...+.
T Consensus 155 ~v~~~~---------~~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 155 AVIDLG---------SDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp EEEETT---------TTEEEEEEECTTSCEEEEE
T ss_pred EEEeCC---------CCEEEEEEECCCCcEEEee
Confidence 765432 2468889888 55555443
No 43
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=93.24 E-value=0.72 Score=39.29 Aligned_cols=60 Identities=15% Similarity=0.401 Sum_probs=34.4
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecC----CCCCCCcCceEEEECCEEEEEcCccCCCCccccC
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCK----DTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYY 188 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~----~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 188 (265)
.++++|++-|. ..|++|...+.+...... .+|.. --++...++++|+|=|
T Consensus 268 ~~G~tYFFKg~-------------~yWR~~~~~~~~~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG----------- 321 (460)
T 1qhu_A 268 NHGATYVFSGS-------------HYWRLDTNRDGWHSWPIAHQWPQGPST--VDAAFSWEDKLYLIQD----------- 321 (460)
T ss_dssp TTCCEEEEETT-------------EEEECTTGGGCCCCEEGGGTCTTSCSS--CSEEEEETTEEEEEET-----------
T ss_pred CCCeEEEEeCC-------------EEEEEecCCCCcCccchhhhccCCCCC--CcEEEEECCeEEEEeC-----------
Confidence 37899998774 255565543332222111 13333 2355566889999976
Q ss_pred CceEEEEcCC
Q psy14331 189 NDVHIFDLET 198 (265)
Q Consensus 189 ~~v~~y~~~~ 198 (265)
+.+|+|+..+
T Consensus 322 ~~yw~f~~~~ 331 (460)
T 1qhu_A 322 TKVYVFLTKG 331 (460)
T ss_dssp TEEEEEECSB
T ss_pred CEEEEEeCCC
Confidence 3578887653
No 44
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.90 E-value=3 Score=33.31 Aligned_cols=41 Identities=5% Similarity=-0.124 Sum_probs=21.7
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEEC
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFG 66 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~G 66 (265)
.++.||....++..+............+++.++++.||+.+
T Consensus 64 ~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 64 GIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEE
T ss_pred eEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEe
Confidence 36667776666544222111122233455666777788876
No 45
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.90 E-value=1.3 Score=38.88 Aligned_cols=93 Identities=8% Similarity=-0.091 Sum_probs=51.0
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEee-ec---CCCCCCC
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNLF-VS---APGAPPP 101 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~w-~~---~~~~p~~ 101 (265)
.+..+|..+.+-... .+....-|.+++.++++.+|+.+. ...+..+|+| .+ ...++..
T Consensus 178 ~V~viD~~t~~v~~~---i~~g~~p~~v~~SpDGr~lyv~~~---------------dg~V~viD~~~~t~~~v~~i~~G 239 (567)
T 1qks_A 178 QIALIDGSTYEIKTV---LDTGYAVHISRLSASGRYLFVIGR---------------DGKVNMIDLWMKEPTTVAEIKIG 239 (567)
T ss_dssp EEEEEETTTCCEEEE---EECSSCEEEEEECTTSCEEEEEET---------------TSEEEEEETTSSSCCEEEEEECC
T ss_pred eEEEEECCCCeEEEE---EeCCCCccceEECCCCCEEEEEcC---------------CCeEEEEECCCCCCcEeEEEecC
Confidence 366677777665331 233334466777778889998653 3567788874 11 1112222
Q ss_pred ccccceEEEe----cCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcE
Q psy14331 102 RCSHQMVALS----ADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW 148 (265)
Q Consensus 102 r~~~~~~~~~----~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W 148 (265)
...+ .+.+. ..++.+|+..-. .+.+.++|..+.+=
T Consensus 240 ~~P~-~ia~s~~~~pDGk~l~v~n~~-----------~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 240 SEAR-SIETSKMEGWEDKYAIAGAYW-----------PPQYVIMDGETLEP 278 (567)
T ss_dssp SEEE-EEEECCSTTCTTTEEEEEEEE-----------TTEEEEEETTTCCE
T ss_pred CCCc-eeEEccccCCCCCEEEEEEcc-----------CCeEEEEECCCCcE
Confidence 2222 22333 235567776432 35677889777653
No 46
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.71 E-value=2.9 Score=32.69 Aligned_cols=79 Identities=10% Similarity=-0.017 Sum_probs=45.5
Q ss_pred CceeEEEcCCC-cEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCC--ceEEeccCCCCC
Q psy14331 136 KDLWVFRMGEK-KWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETY--AWKKIEPLGAGP 211 (265)
Q Consensus 136 ~~~~~yd~~~~-~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~--~W~~~~~~~~~p 211 (265)
..+.+||++.+ .|+.-... ..+++... ++.+++.+.. ...|..+|+.+. .|+.-... .+
T Consensus 146 ~~v~~~d~~G~~~w~~~~~~------~~~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~~~~~--~~ 208 (276)
T 3no2_A 146 SEVREIAPNGQLLNSVKLSG------TPFSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRVNAND--IE 208 (276)
T ss_dssp TEEEEECTTSCEEEEEECSS------CCCEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEEEGGG--SB
T ss_pred CEEEEECCCCCEEEEEECCC------CccceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEecCCC--CC
Confidence 56889998733 36543321 11234444 6777777653 235899999964 47765432 12
Q ss_pred CCCC--CceEEEeCCCeEEEEc
Q psy14331 212 APRS--GCQMAATPDGKILISG 231 (265)
Q Consensus 212 ~~~~--~~~~~~~~~~~iyi~G 231 (265)
..+. -.++....++.+||..
T Consensus 209 ~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 209 GVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SCCCSEEEEEEECTTSCEEEEE
T ss_pred CccccccccceEcCCCCEEEEe
Confidence 1122 2344556688999886
No 47
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.69 E-value=3.3 Score=33.30 Aligned_cols=81 Identities=15% Similarity=0.166 Sum_probs=41.1
Q ss_pred EEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCC-CCCCCcCceEEEE--CC-EEEEEcCccCCCC
Q psy14331 108 VALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKD-TPPSRSGHRMIAL--KK-HLVVFGGFHDNLR 183 (265)
Q Consensus 108 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~p~~~~~~~~~~~--~~-~iyv~GG~~~~~~ 183 (265)
+.+...++.||+.+.. .+.+.+||..+++...+.... .+..........+ ++ .+|+.... .
T Consensus 216 ~~~spdg~~l~v~~~~-----------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~-~--- 280 (361)
T 3scy_A 216 LIFNSDGKFAYLINEI-----------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL-K--- 280 (361)
T ss_dssp EEECTTSSEEEEEETT-----------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS-S---
T ss_pred EEEcCCCCEEEEEcCC-----------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC-C---
Confidence 3444444567776532 355888888877775554322 1221122223333 34 56654321 0
Q ss_pred ccccCCceEEEEc--CCCceEEeccC
Q psy14331 184 EAKYYNDVHIFDL--ETYAWKKIEPL 207 (265)
Q Consensus 184 ~~~~~~~v~~y~~--~~~~W~~~~~~ 207 (265)
.+.+..|++ .+.+++.+...
T Consensus 281 ----~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 281 ----ADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp ----SCEEEEEEECTTTCCEEEEEEE
T ss_pred ----CCEEEEEEEcCCCCcEEEeeEe
Confidence 134666665 46777766653
No 48
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.69 E-value=3 Score=32.88 Aligned_cols=137 Identities=9% Similarity=0.042 Sum_probs=70.8
Q ss_pred HHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCc-eEEEEe-------eecCCCC
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDH-LILMNL-------FVSAPGA 98 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~-~~~yd~-------w~~~~~~ 98 (265)
+..+|..+.+...... .....+.+++.|+++.+|+.+.. .+. +..|++ .......
T Consensus 110 i~v~d~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~--------------~~~~i~~~~~~~~g~~~~~~~~~~ 172 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIP---IPYDAVGIAISPNGNGLILIDRS--------------SANTVRRFKIDADGVLFDTGQEFI 172 (331)
T ss_dssp EEEEETTTTEEEEEEE---CCTTEEEEEECTTSSCEEEEEET--------------TTTEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEECCCCCeEEEEE---CCCCccceEECCCCCEEEEEecC--------------CCceEEEEEECCCCcEeecCCccc
Confidence 5667777666544222 22233567777677778887551 234 565664 1100111
Q ss_pred CCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcE----EEEecCCCCCCCcCceEEEE-CC-EE
Q psy14331 99 PPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW----EKIVCKDTPPSRSGHRMIAL-KK-HL 172 (265)
Q Consensus 99 p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W----~~~~~~~~p~~~~~~~~~~~-~~-~i 172 (265)
+.... ...+.+...++.+|+.+.. .+.+.+||+.+.+. ..++.. .....++.. ++ .+
T Consensus 173 ~~~~~-~~~~~~spdg~~l~v~~~~-----------~~~v~v~d~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 173 SGGTR-PFNITFTPDGNFAFVANLI-----------GNSIGILETQNPENITLLNAVGTN-----NLPGTIVVSRDGSTV 235 (331)
T ss_dssp CSSSS-EEEEEECTTSSEEEEEETT-----------TTEEEEEECSSTTSCEEEEEEECS-----SCCCCEEECTTSSEE
T ss_pred cCCCC-ccceEECCCCCEEEEEeCC-----------CCeEEEEECCCCcccceeeeccCC-----CCCceEEECCCCCEE
Confidence 11111 2233444444567777543 35688999987764 223211 111223332 34 57
Q ss_pred EEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 173 VVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 173 yv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
|+.... .+.+..+|+.+.+.+.+..
T Consensus 236 ~v~~~~---------~~~i~~~d~~~~~~~~~~~ 260 (331)
T 3u4y_A 236 YVLTES---------TVDVFNFNQLSGTLSFVKS 260 (331)
T ss_dssp EEECSS---------EEEEEEEETTTTEEEEEEE
T ss_pred EEEEcC---------CCEEEEEECCCCceeeecc
Confidence 765442 2458889999887755543
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.61 E-value=2.6 Score=33.75 Aligned_cols=64 Identities=8% Similarity=0.077 Sum_probs=34.6
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCC--cEEEEecCCCCCCCcCceEEEE--C---CEEEEEcCccCCCCccc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK--KWEKIVCKDTPPSRSGHRMIAL--K---KHLVVFGGFHDNLREAK 186 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~p~~~~~~~~~~~--~---~~iyv~GG~~~~~~~~~ 186 (265)
++.+++.|+.+ ..+..||..++ .+..+.... ........... + +.+++.|+.++
T Consensus 171 ~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~~~~l~s~~~dg------ 231 (379)
T 3jrp_A 171 ESRKFVTGGAD-----------NLVKIWKYNSDAQTYVLESTLE--GHSDWVRDVAWSPTVLLRSYLASVSQDR------ 231 (379)
T ss_dssp TTCEEEEEETT-----------SCEEEEEEETTTTEEEEEEEEC--CCSSCEEEEEECCCCSSSEEEEEEETTS------
T ss_pred CCCEEEEEeCC-----------CeEEEEEecCCCcceeeEEEEe--cccCcEeEEEECCCCCCCCeEEEEeCCC------
Confidence 36677777642 34777777554 355544332 11111122222 4 67888877543
Q ss_pred cCCceEEEEcCCC
Q psy14331 187 YYNDVHIFDLETY 199 (265)
Q Consensus 187 ~~~~v~~y~~~~~ 199 (265)
.+..||+.+.
T Consensus 232 ---~i~iwd~~~~ 241 (379)
T 3jrp_A 232 ---TCIIWTQDNE 241 (379)
T ss_dssp ---CEEEEEESST
T ss_pred ---EEEEEeCCCC
Confidence 4777887765
No 50
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=92.59 E-value=2.5 Score=31.71 Aligned_cols=94 Identities=18% Similarity=0.244 Sum_probs=48.1
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcE---EEEecCCCCCCC-cCceEEEE--CCEEEEEcCccCCCCcccc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW---EKIVCKDTPPSR-SGHRMIAL--KKHLVVFGGFHDNLREAKY 187 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W---~~~~~~~~p~~~-~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 187 (265)
++++|++-|. .+|+|+-.+-.- +.+...+.|... .--++... ++++|+|-|
T Consensus 79 ~~~iyfFkG~-------------~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG---------- 135 (207)
T 1pex_A 79 HDLIFIFRGR-------------KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG---------- 135 (207)
T ss_dssp TTEEEEEETT-------------EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET----------
T ss_pred CCcEEEEccC-------------EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC----------
Confidence 6899999773 366665321110 122222333211 11233333 479999987
Q ss_pred CCceEEEEcCCCceEE-----ec-cCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 188 YNDVHIFDLETYAWKK-----IE-PLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 188 ~~~v~~y~~~~~~W~~-----~~-~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
+..|+||..+++-+. +. .-+.+|. .. .++... ++++|.|-|..
T Consensus 136 -~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~-~i-DaAf~~-~g~~YfFkg~~ 184 (207)
T 1pex_A 136 -NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD-KV-DAVYEK-NGYIYFFNGPI 184 (207)
T ss_dssp -TEEEEEETTTTEECSSCCCBHHHHSTTSCS-CC-SEEEEE-TTEEEEEETTE
T ss_pred -CEEEEEeCcCccccCCCCccHHHcCCCCCC-Cc-cEEEEc-CCcEEEEECCE
Confidence 468999987653221 11 1111232 22 333333 88999997653
No 51
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.57 E-value=2.7 Score=32.09 Aligned_cols=148 Identities=7% Similarity=-0.090 Sum_probs=66.8
Q ss_pred HHHHhhccc-ceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-eecCCCCCCCcc
Q psy14331 26 DIEAEEKRK-NKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-FVSAPGAPPPRC 103 (265)
Q Consensus 26 ~~~~~d~~~-~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-w~~~~~~p~~r~ 103 (265)
.++.+|..+ .+... ....+....-..+...+++..|++.+. .... ...+|.++. -.....+.....
T Consensus 63 ~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~--------~~~l~~~~~~~~~~~~~~~~~~ 130 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEK-VDTGFATICNNDHGISPDGALYAISDK---VEFG--------KSAIYLLPSTGGTPRLMTKNLP 130 (297)
T ss_dssp EEEEEESSSCCSCEE-CCCTTCCCBCSCCEECTTSSEEEEEEC---TTTS--------SCEEEEEETTCCCCEECCSSSS
T ss_pred eEEEEeCCCCCCceE-eccccccccccceEECCCCCEEEEEEe---CCCC--------cceEEEEECCCCceEEeecCCC
Confidence 356667666 55544 222221122233445545555555432 1111 467888876 111111111111
Q ss_pred ccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCE-EEEEcCccCC
Q psy14331 104 SHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKH-LVVFGGFHDN 181 (265)
Q Consensus 104 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~-iyv~GG~~~~ 181 (265)
...+.+...+..|++.++... .-.++.++..+.....+.... ... ..+... ++. +++.+..+.
T Consensus 131 -~~~~~~spdg~~l~~~~~~~~---------~~~l~~~~~~~~~~~~~~~~~---~~~-~~~~~s~dg~~l~~~~~~~~- 195 (297)
T 2ojh_A 131 -SYWHGWSPDGKSFTYCGIRDQ---------VFDIYSMDIDSGVETRLTHGE---GRN-DGPDYSPDGRWIYFNSSRTG- 195 (297)
T ss_dssp -EEEEEECTTSSEEEEEEEETT---------EEEEEEEETTTCCEEECCCSS---SCE-EEEEECTTSSEEEEEECTTS-
T ss_pred -ccceEECCCCCEEEEEECCCC---------ceEEEEEECCCCcceEcccCC---Ccc-ccceECCCCCEEEEEecCCC-
Confidence 122233333445555554321 235788888777765543221 111 122222 444 444443222
Q ss_pred CCccccCCceEEEEcCCCceEEecc
Q psy14331 182 LREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 182 ~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
...+|.+++.......+..
T Consensus 196 ------~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 196 ------QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp ------SCEEEEEETTSSCEEECCC
T ss_pred ------CccEEEECCCCCCcEEEec
Confidence 3568888877777666544
No 52
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.15 E-value=2.2 Score=34.16 Aligned_cols=55 Identities=18% Similarity=0.150 Sum_probs=28.2
Q ss_pred CEEEEEcCccCCCCccccCCceEEEEcCCC--ceEEeccCCCCCCCCCCceEEEeCC---CeEEEEcCccc
Q psy14331 170 KHLVVFGGFHDNLREAKYYNDVHIFDLETY--AWKKIEPLGAGPAPRSGCQMAATPD---GKILISGGYSK 235 (265)
Q Consensus 170 ~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~--~W~~~~~~~~~p~~~~~~~~~~~~~---~~iyi~GG~~~ 235 (265)
+.+++.|+.++ .|..||+.+. .+..+.... .....-..++...+ +.+++.|+.+.
T Consensus 172 ~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 172 SRKFVTGGADN---------LVKIWKYNSDAQTYVLESTLE--GHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp TCEEEEEETTS---------CEEEEEEETTTTEEEEEEEEC--CCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred CCEEEEEeCCC---------eEEEEEecCCCcceeeEEEEe--cccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 56777776533 4777777654 355544421 11111223333334 57777776553
No 53
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.12 E-value=3.7 Score=32.92 Aligned_cols=97 Identities=18% Similarity=0.323 Sum_probs=48.7
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCC-cEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK-KWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
++.+++.|+.+ ..+..+|+.+. .+..+.... ........+.. ++.+++.|+.+ ..
T Consensus 116 ~~~~l~s~s~D-----------~~v~iwd~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d---------~~ 173 (345)
T 3fm0_A 116 SGNLLATCSRD-----------KSVWVWEVDEEDEYECVSVLN--SHTQDVKHVVWHPSQELLASASYD---------DT 173 (345)
T ss_dssp TSSEEEEEETT-----------SCEEEEEECTTSCEEEEEEEC--CCCSCEEEEEECSSSSCEEEEETT---------SC
T ss_pred CCCEEEEEECC-----------CeEEEEECCCCCCeEEEEEec--CcCCCeEEEEECCCCCEEEEEeCC---------Cc
Confidence 56677777643 34777777654 333333221 11111122222 45666667653 34
Q ss_pred eEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 191 VHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 191 v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
+..||..+..|..+.... .....-.++....+++.++.|+.+
T Consensus 174 i~~w~~~~~~~~~~~~~~--~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 174 VKLYREEEDDWVCCATLE--GHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp EEEEEEETTEEEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEecCCCEEEEEEec--CCCCceEEEEECCCCCEEEEEeCC
Confidence 778888888887555431 111112233333355666666554
No 54
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.81 E-value=4.6 Score=33.22 Aligned_cols=68 Identities=21% Similarity=0.148 Sum_probs=40.1
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCC-CCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKD-TPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
++.+++.++.. ..+..+|+.+++........ ..........+.. ++.+++.++.+ ..
T Consensus 133 ~~~~~~~~~~~-----------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---------~~ 192 (433)
T 3bws_A 133 NTRLAIPLLED-----------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---------NA 192 (433)
T ss_dssp SSEEEEEBTTS-----------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---------TE
T ss_pred CCeEEEEeCCC-----------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---------CE
Confidence 67888887642 45889999988765432221 0011111112233 67888877642 46
Q ss_pred eEEEEcCCCce
Q psy14331 191 VHIFDLETYAW 201 (265)
Q Consensus 191 v~~y~~~~~~W 201 (265)
+..||+.+.+-
T Consensus 193 v~~~d~~~~~~ 203 (433)
T 3bws_A 193 VHVFDLKTLAY 203 (433)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCceE
Confidence 88999887654
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.50 E-value=4.1 Score=31.88 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=47.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++..++.|+. -..+..||..+.+............. -.+++.. ++..++.|+.+ ..+.
T Consensus 108 ~~~~l~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~d---------g~v~ 166 (337)
T 1gxr_A 108 DGCTLIVGGE-----------ASTLSIWDLAAPTPRIKAELTSSAPA-CYALAISPDSKVCFSCCSD---------GNIA 166 (337)
T ss_dssp TSSEEEEEES-----------SSEEEEEECCCC--EEEEEEECSSSC-EEEEEECTTSSEEEEEETT---------SCEE
T ss_pred CCCEEEEEcC-----------CCcEEEEECCCCCcceeeecccCCCc-eEEEEECCCCCEEEEEeCC---------CcEE
Confidence 4566666653 24588999988875444332211111 1122222 45566666643 3588
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.||+.+.+....-.. ....-..+....+++.++.|+.+
T Consensus 167 ~~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQG----HTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp EEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeCCCCceeeeeec----ccCceEEEEECCCCCEEEEEecC
Confidence 899887654332221 11112233333355666666544
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.09 E-value=5 Score=32.03 Aligned_cols=39 Identities=21% Similarity=0.126 Sum_probs=18.4
Q ss_pred HHHhhcccceEEEeccCCCCC-CCceeeEEecCCCEEEEECc
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTR-RANFSFLAHPDKDQLILFGG 67 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~-r~~~~~~~~~~~~~lyv~GG 67 (265)
+..||..+.++.. ....... ..-.++.+.+ ++.+++.|+
T Consensus 32 v~i~~~~~~~~~~-~~~~~~h~~~v~~~~~~~-~~~~l~~~~ 71 (372)
T 1k8k_C 32 VHIYEKSGNKWVQ-VHELKEHNGQVTGVDWAP-DSNRIVTCG 71 (372)
T ss_dssp EEEEEEETTEEEE-EEEEECCSSCEEEEEEET-TTTEEEEEE
T ss_pred EEEEeCCCCcEEe-eeeecCCCCcccEEEEeC-CCCEEEEEc
Confidence 6677877776543 2222211 2223344544 444555555
No 57
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=90.63 E-value=4.3 Score=30.66 Aligned_cols=101 Identities=17% Similarity=0.387 Sum_probs=56.8
Q ss_pred cCCCEEEEECcEEeCCCceeeCCCcccCceEEEEeeecCC---------CCCCCc-cccceEEEecCCCEEEEEcCcccC
Q psy14331 57 PDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNLFVSAP---------GAPPPR-CSHQMVALSADKGQLWMFGGEFSS 126 (265)
Q Consensus 57 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~w~~~~---------~~p~~r-~~~~~~~~~~~~~~iyv~GG~~~~ 126 (265)
+.++++|+|-| +..|+||.....+ .+|... .-.++... ..++++|++-|
T Consensus 85 ~~~~k~yfFkG----------------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~-~~~g~~YfFkG---- 143 (218)
T 1gen_A 85 PQEEKAVFFAG----------------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNW-SKNKKTYIFAG---- 143 (218)
T ss_dssp TTTTEEEEEET----------------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEE-TTTTEEEEEET----
T ss_pred CCCCEEEEEeC----------------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEE-cCCCeEEEEEC----
Confidence 35789999988 5778887511111 223221 12333322 34789999977
Q ss_pred CCccccccCCceeEEEcCCCcEEE-----Ee-c-CCCCCCCcCceEEEEC--CEEEEEcCccCCCCccccCCceEEEEcC
Q psy14331 127 ASESQFHHYKDLWVFRMGEKKWEK-----IV-C-KDTPPSRSGHRMIALK--KHLVVFGGFHDNLREAKYYNDVHIFDLE 197 (265)
Q Consensus 127 ~~~~~~~~~~~~~~yd~~~~~W~~-----~~-~-~~~p~~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~v~~y~~~ 197 (265)
+..|+||..+++-.. +. . ++.|. .-.++...+ +.+|.|-| +..|+||..
T Consensus 144 ---------~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~--~idaAf~~~~~g~~YfFkg-----------~~y~~~~~~ 201 (218)
T 1gen_A 144 ---------DKFWRYNEVKKKMDPGFPKLIADAWNAIPD--NLDAVVDLQGGGHSYFFKG-----------AYYLKLENQ 201 (218)
T ss_dssp ---------TEEEEEETTTTEECSSCCEEHHHHSSSCCS--SCSEEEECTTTCEEEEEET-----------TEEEEEETT
T ss_pred ---------CEEEEEECccccccCCCCcchhhccCCCCC--CCCEEEEEcCCCcEEEEEC-----------CEEEEEECC
Confidence 358899987653211 11 0 11222 223455544 79999977 457888876
Q ss_pred CCc
Q psy14331 198 TYA 200 (265)
Q Consensus 198 ~~~ 200 (265)
+..
T Consensus 202 ~~~ 204 (218)
T 1gen_A 202 SLK 204 (218)
T ss_dssp EEE
T ss_pred cee
Confidence 554
No 58
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.20 E-value=6 Score=31.53 Aligned_cols=24 Identities=13% Similarity=0.075 Sum_probs=15.3
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCce
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAW 201 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W 201 (265)
++..++.|+.+ ..+..||+.+.+-
T Consensus 213 ~~~~l~~~~~d---------~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 213 NGSRVAWVSHD---------STVCLADADKKMA 236 (372)
T ss_dssp SSSEEEEEETT---------TEEEEEEGGGTTE
T ss_pred CCCEEEEEeCC---------CEEEEEECCCCce
Confidence 45566666542 4588899887653
No 59
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=89.89 E-value=4.7 Score=29.87 Aligned_cols=94 Identities=20% Similarity=0.223 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcE---EEEecCC--CCCCCcCceEEEE--CCEEEEEcCccCCCCcc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW---EKIVCKD--TPPSRSGHRMIAL--KKHLVVFGGFHDNLREA 185 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W---~~~~~~~--~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~ 185 (265)
.++++|++-| +.+|+|+..+... +.+.... +|..... ++... ++++|+|-|
T Consensus 60 ~~g~~yfFkg-------------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG-------- 117 (196)
T 3c7x_A 60 KDGKFVFFKG-------------DKHWVFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG-------- 117 (196)
T ss_dssp TTSCEEEEET-------------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET--------
T ss_pred CCCcEEEecC-------------CEEEEEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC--------
Confidence 4788999977 3478887432110 1122211 3323222 44443 589999977
Q ss_pred ccCCceEEEEcCCCceE-----EeccCCCCCCCCCCceEEEeCCC-eEEEEcCc
Q psy14331 186 KYYNDVHIFDLETYAWK-----KIEPLGAGPAPRSGCQMAATPDG-KILISGGY 233 (265)
Q Consensus 186 ~~~~~v~~y~~~~~~W~-----~~~~~~~~p~~~~~~~~~~~~~~-~iyi~GG~ 233 (265)
+..|+||..+++-+ .+..-..+|. .-.++....++ ++|.+-|.
T Consensus 118 ---~~yw~yd~~~~~v~~gyPk~i~~~~gip~--~idaAf~~~~~~~~YfFkg~ 166 (196)
T 3c7x_A 118 ---NKYYRFNEELRAVDSEYPKNIKVWEGIPE--SPRGSFMGSDEVFTYFYKGN 166 (196)
T ss_dssp ---TEEEEEETTTTEECTTCSEEGGGSBTCCS--SCSEEEECTTSSEEEEEETT
T ss_pred ---CEEEEEeCCcccccCCCCccHHHCCCcCC--CcceeEEecCCCEEEEEECC
Confidence 45789998765322 1111111232 22344444344 89998664
No 60
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=89.70 E-value=9.5 Score=33.07 Aligned_cols=93 Identities=10% Similarity=-0.014 Sum_probs=47.9
Q ss_pred HHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEeee-c---CCCCCCCc
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNLFV-S---APGAPPPR 102 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~w~-~---~~~~p~~r 102 (265)
+..+|..+.+...... .....|.+++.++++.||+.+. -+.+..||+|. + ...++...
T Consensus 161 V~v~D~~t~~~~~~i~---~g~~~~~v~~spdg~~l~v~~~---------------d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 161 IALVDGDSKKIVKVID---TGYAVHISRMSASGRYLLVIGR---------------DARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp EEEEETTTCCEEEEEE---CSTTEEEEEECTTSCEEEEEET---------------TSEEEEEETTSSSCEEEEEEECCS
T ss_pred EEEEECCCceEEEEEe---cCcccceEEECCCCCEEEEECC---------------CCeEEEEECcCCCCcEEEEEecCC
Confidence 4556766665533221 1122566667778888888765 24566666631 1 11122222
Q ss_pred cccceEEEec----CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEE
Q psy14331 103 CSHQMVALSA----DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWE 149 (265)
Q Consensus 103 ~~~~~~~~~~----~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~ 149 (265)
.. ..+.+.. .++.+|+.+-. -+.+.++|..+.+-.
T Consensus 223 ~p-~~va~sp~~~~dg~~l~v~~~~-----------~~~v~v~D~~t~~~~ 261 (543)
T 1nir_A 223 EA-RSVESSKFKGYEDRYTIAGAYW-----------PPQFAIMDGETLEPK 261 (543)
T ss_dssp EE-EEEEECCSTTCTTTEEEEEEEE-----------SSEEEEEETTTCCEE
T ss_pred Cc-ceEEeCCCcCCCCCEEEEEEcc-----------CCeEEEEeccccccc
Confidence 22 2233443 35566665422 245778888776543
No 61
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.65 E-value=4.9 Score=36.50 Aligned_cols=81 Identities=6% Similarity=0.015 Sum_probs=47.8
Q ss_pred eEEEcCCCcEEEEecCC-CCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCC
Q psy14331 139 WVFRMGEKKWEKIVCKD-TPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSG 216 (265)
Q Consensus 139 ~~yd~~~~~W~~~~~~~-~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~ 216 (265)
.+||+.+++++...... +|.... .+++.. ++.|++.+. +.+.+||+.+.+++.......++.....
T Consensus 562 ~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~ 629 (781)
T 3v9f_A 562 CFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-----------TGISCYITSKKCFYTYDHSNNIPQGSFI 629 (781)
T ss_dssp EESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-----------SCEEEEETTTTEEEEECGGGTCCSSCEE
T ss_pred EEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-----------CceEEEECCCCceEEecccCCccccccc
Confidence 78888888877765332 333332 344443 567777542 4588999999998887764444544332
Q ss_pred -ceEEEeCCCeEEEEc
Q psy14331 217 -CQMAATPDGKILISG 231 (265)
Q Consensus 217 -~~~~~~~~~~iyi~G 231 (265)
.+++...++.||+-+
T Consensus 630 ~~~~~~~~~G~l~~g~ 645 (781)
T 3v9f_A 630 SGCVTKDHNGLIYFGS 645 (781)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred cCceEECCCCEEEEEC
Confidence 233333356666543
No 62
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.22 E-value=13 Score=33.86 Aligned_cols=94 Identities=13% Similarity=0.229 Sum_probs=55.7
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCC-CCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKD-TPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
.++.|++... .-+.+||+.+++++...... +|... -.+++.. ++.|++.+. +.
T Consensus 552 ~~g~lWigT~-------------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-----------~G 606 (795)
T 4a2l_A 552 SNGIIWVGTR-------------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-----------RG 606 (795)
T ss_dssp TTSCEEEEES-------------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-----------TE
T ss_pred CCCCEEEEeC-------------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-----------Cc
Confidence 3577777532 23889999999888765332 33222 2233333 467777542 45
Q ss_pred eEEEEcCCCceEEeccCCCCCCCCCC-ceEEEeCCCeEEEEc
Q psy14331 191 VHIFDLETYAWKKIEPLGAGPAPRSG-CQMAATPDGKILISG 231 (265)
Q Consensus 191 v~~y~~~~~~W~~~~~~~~~p~~~~~-~~~~~~~~~~iyi~G 231 (265)
+.+||+.+.+++.......++..... .+++...++.||+-+
T Consensus 607 l~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~ 648 (795)
T 4a2l_A 607 ISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGG 648 (795)
T ss_dssp EEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEE
T ss_pred eEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEec
Confidence 88999999999877654434544432 333444456666544
No 63
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.08 E-value=6.7 Score=30.52 Aligned_cols=158 Identities=11% Similarity=-0.034 Sum_probs=74.7
Q ss_pred HHHhhcccce--EEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-----eecCCCCC
Q psy14331 27 IEAEEKRKNK--VIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-----FVSAPGAP 99 (265)
Q Consensus 27 ~~~~d~~~~~--w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-----w~~~~~~p 99 (265)
+..+|..+.+ |+.. . +.....|.+.+.+ ++.+++. + -+.+..||+ |.... +
T Consensus 17 v~~~d~~tG~~~w~~~-~--~~~~~~~~~~~~p-dG~ilvs-~---------------~~~V~~~d~~G~~~W~~~~--~ 74 (276)
T 3no2_A 17 IAIINKDTKEIVWEYP-L--EKGWECNSVAATK-AGEILFS-Y---------------SKGAKMITRDGRELWNIAA--P 74 (276)
T ss_dssp EEEEETTTTEEEEEEE-C--CTTCCCCEEEECT-TSCEEEE-C---------------BSEEEEECTTSCEEEEEEC--C
T ss_pred EEEEECCCCeEEEEeC-C--CccCCCcCeEECC-CCCEEEe-C---------------CCCEEEECCCCCEEEEEcC--C
Confidence 5567775555 6542 1 1112334555554 4556663 2 245677776 55433 1
Q ss_pred CCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCC-cEEEEecCCC--CCCCcCceEEEECCEEEEEc
Q psy14331 100 PPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK-KWEKIVCKDT--PPSRSGHRMIALKKHLVVFG 176 (265)
Q Consensus 100 ~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~--p~~~~~~~~~~~~~~iyv~G 176 (265)
.....+++..+ .++.+++..... ...++.+|+... .|+....... +...........++.+++..
T Consensus 75 ~~~~~~~~~~~--~dG~~lv~~~~~----------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 75 AGCEMQTARIL--PDGNALVAWCGH----------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp TTCEEEEEEEC--TTSCEEEEEEST----------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred CCccccccEEC--CCCCEEEEecCC----------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 11122333333 266666654321 235778887443 2443221111 11111112223355555543
Q ss_pred CccCCCCccccCCceEEEEcCCC-ceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 177 GFHDNLREAKYYNDVHIFDLETY-AWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 177 G~~~~~~~~~~~~~v~~y~~~~~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.. ...|.+||+.-+ .|+.-... .| +++....++.++|.+..+
T Consensus 143 ~~---------~~~v~~~d~~G~~~w~~~~~~--~~-----~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 143 FA---------TSEVREIAPNGQLLNSVKLSG--TP-----FSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp TT---------TTEEEEECTTSCEEEEEECSS--CC-----CEEEECTTSCEEEECBTT
T ss_pred cC---------CCEEEEECCCCCEEEEEECCC--Cc-----cceeEcCCCCEEEEeCCC
Confidence 31 256889998732 36644321 12 334455577888876543
No 64
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.04 E-value=3.5 Score=32.59 Aligned_cols=67 Identities=9% Similarity=0.168 Sum_probs=35.5
Q ss_pred CCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccc
Q psy14331 58 DKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFH 133 (265)
Q Consensus 58 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 133 (265)
.++.+|+.++. .+.++++|+ ....-..+.....+ .+.+...++.+|+.+..
T Consensus 9 ~~~~~~v~~~~--------------~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~~~v~~~~---------- 63 (349)
T 1jmx_B 9 AGHEYMIVTNY--------------PNNLHVVDVASDTVYKSCVMPDKFGPG-TAMMAPDNRTAYVLNNH---------- 63 (349)
T ss_dssp TTCEEEEEEET--------------TTEEEEEETTTTEEEEEEECSSCCSSC-EEEECTTSSEEEEEETT----------
T ss_pred CCCEEEEEeCC--------------CCeEEEEECCCCcEEEEEecCCCCCCc-eeEECCCCCEEEEEeCC----------
Confidence 46777777652 356777887 11110111100122 23343334567777642
Q ss_pred cCCceeEEEcCCCcEEE
Q psy14331 134 HYKDLWVFRMGEKKWEK 150 (265)
Q Consensus 134 ~~~~~~~yd~~~~~W~~ 150 (265)
...+.++|+.+++-..
T Consensus 64 -~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 64 -YGDIYGIDLDTCKNTF 79 (349)
T ss_dssp -TTEEEEEETTTTEEEE
T ss_pred -CCcEEEEeCCCCcEEE
Confidence 3568999998876543
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.01 E-value=8.3 Score=31.49 Aligned_cols=105 Identities=17% Similarity=0.196 Sum_probs=53.4
Q ss_pred eEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CC-EEEEEcCccCCCC
Q psy14331 107 MVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KK-HLVVFGGFHDNLR 183 (265)
Q Consensus 107 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~-~iyv~GG~~~~~~ 183 (265)
++.+...+..+++.||... -..+..||..+++-...-... .. ...+.. ++ .+++.+|..
T Consensus 264 ~~~~~p~~~~ll~~~~gs~---------d~~i~i~d~~~~~~~~~~~~~--~~---v~~~~~s~~~~~l~~~~g~~---- 325 (401)
T 4aez_A 264 AVAWCPWQSNLLATGGGTM---------DKQIHFWNAATGARVNTVDAG--SQ---VTSLIWSPHSKEIMSTHGFP---- 325 (401)
T ss_dssp EEEECTTSTTEEEEECCTT---------TCEEEEEETTTCCEEEEEECS--SC---EEEEEECSSSSEEEEEECTT----
T ss_pred EEEECCCCCCEEEEecCCC---------CCEEEEEECCCCCEEEEEeCC--Cc---EEEEEECCCCCeEEEEeecC----
Confidence 3344444556777765211 245889998877543332211 11 122222 33 455544422
Q ss_pred ccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 184 EAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 184 ~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
-..+..||..+.......... .....-..+....++.+++.||.+.
T Consensus 326 ----dg~i~v~~~~~~~~~~~~~~~--~h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 326 ----DNNLSIWSYSSSGLTKQVDIP--AHDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp ----TCEEEEEEEETTEEEEEEEEE--CCSSCCCEEEECTTSSEEEEECTTS
T ss_pred ----CCcEEEEecCCccceeEEEec--CCCCCEEEEEECCCCCEEEEEeCCC
Confidence 246888998887766554321 1111223334444677777777653
No 66
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=88.72 E-value=8.9 Score=31.48 Aligned_cols=94 Identities=11% Similarity=0.076 Sum_probs=47.9
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCC--cE-EEEecCCCCCCC-cCceEEEE--CCEEEEEcCccCCCCcccc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK--KW-EKIVCKDTPPSR-SGHRMIAL--KKHLVVFGGFHDNLREAKY 187 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~--~W-~~~~~~~~p~~~-~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 187 (265)
++++|+|-|. .+|+|+.... .+ +.+...+.|... .--++... ++++|+|-|
T Consensus 236 ~g~~~fFkg~-------------~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG---------- 292 (365)
T 3ba0_A 236 RNQVFLFKDD-------------KYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD---------- 292 (365)
T ss_dssp GTEEEEEETT-------------EEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET----------
T ss_pred CCEEEEEeCC-------------EEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC----------
Confidence 6899999773 3566653321 11 122222233311 12244444 579999977
Q ss_pred CCceEEEEcCCCceEE-----ecc-CCCCCCCCCCceEEEeCCCeEEEEcCc
Q psy14331 188 YNDVHIFDLETYAWKK-----IEP-LGAGPAPRSGCQMAATPDGKILISGGY 233 (265)
Q Consensus 188 ~~~v~~y~~~~~~W~~-----~~~-~~~~p~~~~~~~~~~~~~~~iyi~GG~ 233 (265)
+..|+||..+++-.. +.. -+..|. .-.+++...++++|.|-|.
T Consensus 293 -~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~--~iDaA~~~~~g~~YfFkg~ 341 (365)
T 3ba0_A 293 -NQYWRYDERRQMMDPGYPKLITKNFQGIGP--KIDAVFYSKNKYYYFFQGS 341 (365)
T ss_dssp -TEEEEEETTTTEECSSCCCCHHHHSTTCCS--SCSEEEEETTTEEEEEETT
T ss_pred -CEEEEEeCCcceecCCCCcchhhcCCCCCC--ccceeeEecCCcEEEEeCC
Confidence 468999987654221 100 111222 2234444447889988664
No 67
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=88.58 E-value=6 Score=29.28 Aligned_cols=65 Identities=12% Similarity=0.277 Sum_probs=40.6
Q ss_pred cCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEE-----Ee-cC-CCCCCCcCceEEEECCEEEEEcCccCCCCc
Q psy14331 112 ADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEK-----IV-CK-DTPPSRSGHRMIALKKHLVVFGGFHDNLRE 184 (265)
Q Consensus 112 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~-----~~-~~-~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~ 184 (265)
..++++|++-| +..|+||..+++-.. +. .. +.|. .-.++...++.+|.|-|
T Consensus 107 ~~~g~~yfFkg-------------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~--~idaa~~~~g~~Yffkg------- 164 (195)
T 1itv_A 107 SGRGKMLLFSG-------------RRLWRFDVKAQMVDPRSASEVDRMFPGVPL--DTHDVFQFREKAYFCQD------- 164 (195)
T ss_dssp CSTTEEEEEET-------------TEEEEEETTTTEECGGGCEEHHHHSTTSCS--SCSEEEEETTEEEEEET-------
T ss_pred cCCCeEEEEeC-------------CEEEEEeCCcccccCCCccChhhcCCCCCC--CCCEEEEeCCeEEEEeC-------
Confidence 34789999977 348899987653211 11 11 1222 23456666899999987
Q ss_pred cccCCceEEEEcCCCceE
Q psy14331 185 AKYYNDVHIFDLETYAWK 202 (265)
Q Consensus 185 ~~~~~~v~~y~~~~~~W~ 202 (265)
+..++||..+.+=.
T Consensus 165 ----~~y~~~~~~~~~v~ 178 (195)
T 1itv_A 165 ----RFYWRVSSRSELNQ 178 (195)
T ss_dssp ----TEEEEEECCTTCCE
T ss_pred ----CEEEEEECCccEEe
Confidence 36788888776533
No 68
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=88.52 E-value=14 Score=33.48 Aligned_cols=82 Identities=9% Similarity=0.097 Sum_probs=48.0
Q ss_pred ceeEEEcCCCcEEEEecCC-CCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCce-EEEEcCCCceEEeccCCCCCCC
Q psy14331 137 DLWVFRMGEKKWEKIVCKD-TPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDV-HIFDLETYAWKKIEPLGAGPAP 213 (265)
Q Consensus 137 ~~~~yd~~~~~W~~~~~~~-~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v-~~y~~~~~~W~~~~~~~~~p~~ 213 (265)
-+++||+.+++++...... +|... -.+++.. ++.|++-.. +.+ .+||+.+.+++.......+|..
T Consensus 516 Gl~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~T~-----------~Glv~~~d~~~~~~~~~~~~~gl~~~ 583 (781)
T 3v9f_A 516 GVGIYTPDMQLVRKFNQYEGFCSNT-INQIYRSSKGQMWLATG-----------EGLVCFPSARNFDYQVFQRKEGLPNT 583 (781)
T ss_dssp CEEEECTTCCEEEEECTTTTCSCSC-EEEEEECTTSCEEEEET-----------TEEEEESCTTTCCCEEECGGGTCSCC
T ss_pred CEEEEeCCCCeEEEccCCCCCCCCe-eEEEEECCCCCEEEEEC-----------CCceEEECCCCCcEEEccccCCCCCc
Confidence 3888999999888775432 22111 1122222 456776432 346 8899999888877654334543
Q ss_pred CCCceEEEeCCCeEEEEc
Q psy14331 214 RSGCQMAATPDGKILISG 231 (265)
Q Consensus 214 ~~~~~~~~~~~~~iyi~G 231 (265)
.. .+++.-.++.|++.+
T Consensus 584 ~i-~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 584 HI-RAISEDKNGNIWAST 600 (781)
T ss_dssp CC-CEEEECSSSCEEEEC
T ss_pred eE-EEEEECCCCCEEEEc
Confidence 33 444444466788765
No 69
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=88.33 E-value=7.9 Score=30.37 Aligned_cols=131 Identities=9% Similarity=0.033 Sum_probs=65.2
Q ss_pred CCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccc
Q psy14331 58 DKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFH 133 (265)
Q Consensus 58 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 133 (265)
..+.+|+.... -+.+..+|+ ....-.. +.... .+.+...++.+|+.+..
T Consensus 8 ~~~~~~v~~~~--------------~~~v~~~d~~~~~~~~~~~~--~~~~~-~~~~s~dg~~l~~~~~~---------- 60 (331)
T 3u4y_A 8 TSNFGIVVEQH--------------LRRISFFSTDTLEILNQITL--GYDFV-DTAITSDCSNVVVTSDF---------- 60 (331)
T ss_dssp CCCEEEEEEGG--------------GTEEEEEETTTCCEEEEEEC--CCCEE-EEEECSSSCEEEEEEST----------
T ss_pred CCCEEEEEecC--------------CCeEEEEeCcccceeeeEEc--cCCcc-eEEEcCCCCEEEEEeCC----------
Confidence 46777777652 356777777 1111111 12222 34444445567877653
Q ss_pred cCCceeEEEcCCCcE--EEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCC
Q psy14331 134 HYKDLWVFRMGEKKW--EKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGA 209 (265)
Q Consensus 134 ~~~~~~~yd~~~~~W--~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~ 209 (265)
.+.++.+|+.+++- ..+.... .+. ++++.. ++.+| .+...+. ...|..+|+.+.+-...-..+
T Consensus 61 -~~~i~~~d~~~~~~~~~~~~~~~--~~~--~~~~~s~dg~~l~-~~~~~~~------~~~i~v~d~~~~~~~~~~~~~- 127 (331)
T 3u4y_A 61 -CQTLVQIETQLEPPKVVAIQEGQ--SSM--ADVDITPDDQFAV-TVTGLNH------PFNMQSYSFLKNKFISTIPIP- 127 (331)
T ss_dssp -TCEEEEEECSSSSCEEEEEEECS--SCC--CCEEECTTSSEEE-ECCCSSS------SCEEEEEETTTTEEEEEEECC-
T ss_pred -CCeEEEEECCCCceeEEecccCC--CCc--cceEECCCCCEEE-EecCCCC------cccEEEEECCCCCeEEEEECC-
Confidence 24689999988874 2232221 222 213332 34566 4332111 137999999887654433321
Q ss_pred CCCCCCCceEEEeCCCe-EEEEcC
Q psy14331 210 GPAPRSGCQMAATPDGK-ILISGG 232 (265)
Q Consensus 210 ~p~~~~~~~~~~~~~~~-iyi~GG 232 (265)
..-+.++...+++ +|+.+.
T Consensus 128 ----~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 128 ----YDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp ----TTEEEEEECTTSSCEEEEEE
T ss_pred ----CCccceEECCCCCEEEEEec
Confidence 1113444444553 666543
No 70
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=88.21 E-value=8.2 Score=30.42 Aligned_cols=97 Identities=9% Similarity=-0.017 Sum_probs=53.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
+++||+.+.. ...+++||+.+++...+... ....-.+++.. ++.+|+....+.. ....|+
T Consensus 55 ~g~l~~~~~~-----------~~~i~~~d~~~~~~~~~~~~---~~~~~~~i~~~~dg~l~v~~~~~~~-----~~~~i~ 115 (333)
T 2dg1_A 55 QGQLFLLDVF-----------EGNIFKINPETKEIKRPFVS---HKANPAAIKIHKDGRLFVCYLGDFK-----STGGIF 115 (333)
T ss_dssp TSCEEEEETT-----------TCEEEEECTTTCCEEEEEEC---SSSSEEEEEECTTSCEEEEECTTSS-----SCCEEE
T ss_pred CCCEEEEECC-----------CCEEEEEeCCCCcEEEEeeC---CCCCcceEEECCCCcEEEEeCCCCC-----CCceEE
Confidence 6778887653 24689999998887765422 11122233333 5678876532211 124789
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
+||+.+...+.+... ......-..++.-.++.+|+..
T Consensus 116 ~~d~~~~~~~~~~~~--~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 116 AATENGDNLQDIIED--LSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp EECTTSCSCEEEECS--SSSCCCEEEEEECTTSCEEEEE
T ss_pred EEeCCCCEEEEEEcc--CccCCcccceEECCCCCEEEEe
Confidence 999988876633221 1111222333444466777754
No 71
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=87.88 E-value=11 Score=31.32 Aligned_cols=66 Identities=9% Similarity=0.005 Sum_probs=37.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.+++.|+.+ ..+-++|++++....+..... ......++... ++.+++.|+.+ ..|.
T Consensus 176 ~~~~l~s~s~D-----------~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~~d---------g~i~ 234 (435)
T 4e54_B 176 NTNQFYASSME-----------GTTRLQDFKGNILRVFASSDT-INIWFCSLDVSASSRMVVTGDNV---------GNVI 234 (435)
T ss_dssp CTTEEEEECSS-----------SCEEEEETTSCEEEEEECCSS-CSCCCCCEEEETTTTEEEEECSS---------SBEE
T ss_pred CCCEEEEEeCC-----------CEEEEeeccCCceeEEeccCC-CCccEEEEEECCCCCEEEEEeCC---------CcEe
Confidence 55666666643 347788988877665544321 11112223332 56777777753 3577
Q ss_pred EEEcCCCc
Q psy14331 193 IFDLETYA 200 (265)
Q Consensus 193 ~y~~~~~~ 200 (265)
.+|+....
T Consensus 235 ~wd~~~~~ 242 (435)
T 4e54_B 235 LLNMDGKE 242 (435)
T ss_dssp EEESSSCB
T ss_pred eeccCcce
Confidence 88876543
No 72
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.76 E-value=15 Score=32.84 Aligned_cols=114 Identities=11% Similarity=0.124 Sum_probs=64.1
Q ss_pred CCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCCCc--------cccceEEEecCCCEEEEEcCc
Q psy14331 58 DKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPPPR--------CSHQMVALSADKGQLWMFGGE 123 (265)
Q Consensus 58 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~~r--------~~~~~~~~~~~~~~iyv~GG~ 123 (265)
.++.||+... ...++.+|. |......+... .....++. +++||+...
T Consensus 65 ~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~- 125 (668)
T 1kv9_A 65 HDGVIYTSMS---------------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW---GDKVYVGTL- 125 (668)
T ss_dssp ETTEEEEEEG---------------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---BTEEEEECT-
T ss_pred ECCEEEEECC---------------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE---CCEEEEEcC-
Confidence 3899999765 356777886 76654433211 01222333 788888643
Q ss_pred ccCCCccccccCCceeEEEcCCCc--EEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCc-
Q psy14331 124 FSSASESQFHHYKDLWVFRMGEKK--WEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYA- 200 (265)
Q Consensus 124 ~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~- 200 (265)
-..++.+|..+++ |+.-............+.++.++.+|+-.+.... .....|+.||+.+.+
T Consensus 126 -----------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~----~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 126 -----------DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY----GVRGFVSAYDADTGKL 190 (668)
T ss_dssp -----------TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT----CCBCEEEEEETTTCCE
T ss_pred -----------CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCc----CCCCEEEEEECCCCcE
Confidence 2468999998874 8765322100111222344568888773221111 123579999998754
Q ss_pred -eEEec
Q psy14331 201 -WKKIE 205 (265)
Q Consensus 201 -W~~~~ 205 (265)
|+.-.
T Consensus 191 ~W~~~~ 196 (668)
T 1kv9_A 191 AWRFYT 196 (668)
T ss_dssp EEEEES
T ss_pred EEEecc
Confidence 87643
No 73
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=87.18 E-value=9.1 Score=29.81 Aligned_cols=94 Identities=17% Similarity=0.131 Sum_probs=47.1
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCc-eEEE-ECCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGH-RMIA-LKKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++..++.|+.+ ..+..||..+.+-...-... ....... .... .++.+++.|+.+ ..|
T Consensus 203 ~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~d---------g~i 261 (312)
T 4ery_A 203 NGKYILAATLD-----------NTLKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSED---------NLV 261 (312)
T ss_dssp TSSEEEEEETT-----------TEEEEEETTTTEEEEEECSS-CCSSSCCCEEEECSSSCEEEECCTT---------SCE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCcEEEEEEec-CCceEEEEEEEEeCCCcEEEEECCC---------CEE
Confidence 45566666532 45888998877543322111 1111111 2222 256677777753 358
Q ss_pred EEEEcCCCceE-EeccCCCCCCCCCCceEEEeCCCeEEEEcCc
Q psy14331 192 HIFDLETYAWK-KIEPLGAGPAPRSGCQMAATPDGKILISGGY 233 (265)
Q Consensus 192 ~~y~~~~~~W~-~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~ 233 (265)
..||+.+.+-. .+.. ....-..++...++.+++.++.
T Consensus 262 ~vwd~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 262 YIWNLQTKEIVQKLQG-----HTDVVISTACHPTENIIASAAL 299 (312)
T ss_dssp EEEETTTCCEEEEECC-----CSSCEEEEEECSSSSEEEEEEC
T ss_pred EEEECCCchhhhhhhc-----cCCcEEEEeecCcCCceEEEEc
Confidence 88998876532 2221 1111233344445666766654
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.88 E-value=4.4 Score=32.59 Aligned_cols=39 Identities=15% Similarity=-0.014 Sum_probs=19.4
Q ss_pred HHHhhcccceEEEeccCCCCCCCc-eeeEEecCCCEEEEECc
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRAN-FSFLAHPDKDQLILFGG 67 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~-~~~~~~~~~~~lyv~GG 67 (265)
+..||..+..|.. ...+...... .++.+.+ ++.+++.|+
T Consensus 35 i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~s~-~~~~l~s~s 74 (377)
T 3dwl_C 35 VELYEQDGNGWKH-ARTFSDHDKIVTCVDWAP-KSNRIVTCS 74 (377)
T ss_dssp BCEEEEETTEEEE-CCCBCCCSSCEEEEEECT-TTCCEEEEE
T ss_pred EEEEEccCCceEE-EEEEecCCceEEEEEEeC-CCCEEEEEe
Confidence 6667777776655 3333322222 2334443 345555555
No 75
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=86.67 E-value=11 Score=30.14 Aligned_cols=151 Identities=15% Similarity=0.149 Sum_probs=73.8
Q ss_pred ccceEEEeccCCCCCCCce-eeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCC-CCccccc
Q psy14331 33 RKNKVIEKVVPEPTRRANF-SFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAP-PPRCSHQ 106 (265)
Q Consensus 33 ~~~~w~~~~~~~p~~r~~~-~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p-~~r~~~~ 106 (265)
.-.+|..+....+.+.... ++.+. ++.+|+.|- ...+++-+- |....... .+-....
T Consensus 64 gG~tW~~~~~~~~~~~~~~~~i~~~--~~~~~~~g~---------------~g~i~~S~DgG~tW~~~~~~~~~~~~~~~ 126 (327)
T 2xbg_A 64 GGQTWEPRTLVLDHSDYRFNSVSFQ--GNEGWIVGE---------------PPIMLHTTDGGQSWSQIPLDPKLPGSPRL 126 (327)
T ss_dssp TTSSCEECCCCCSCCCCEEEEEEEE--TTEEEEEEE---------------TTEEEEESSTTSSCEECCCCTTCSSCEEE
T ss_pred CCCCCeECCCCCCCCCccEEEEEec--CCeEEEEEC---------------CCeEEEECCCCCCceECccccCCCCCeEE
Confidence 3457877433322222222 33443 578888643 223333222 77765321 1211222
Q ss_pred eEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCcc
Q psy14331 107 MVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREA 185 (265)
Q Consensus 107 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~ 185 (265)
.+.. .++.+|+.|.. ..+++-+-...+|+.+... .+...+.++.. ++.++++|-.
T Consensus 127 i~~~--~~~~~~~~~~~------------g~v~~S~DgG~tW~~~~~~---~~~~~~~~~~~~~~~~~~~g~~------- 182 (327)
T 2xbg_A 127 IKAL--GNGSAEMITNV------------GAIYRTKDSGKNWQALVQE---AIGVMRNLNRSPSGEYVAVSSR------- 182 (327)
T ss_dssp EEEE--ETTEEEEEETT------------CCEEEESSTTSSEEEEECS---CCCCEEEEEECTTSCEEEEETT-------
T ss_pred EEEE--CCCCEEEEeCC------------ccEEEEcCCCCCCEEeecC---CCcceEEEEEcCCCcEEEEECC-------
Confidence 3323 26788887641 2244443345689998643 22223334333 4566666531
Q ss_pred ccCCceEEEEcC-CCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 186 KYYNDVHIFDLE-TYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 186 ~~~~~v~~y~~~-~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
..+++-+-. ..+|+.+.. +.....+.++...++.+|+.+
T Consensus 183 ---G~~~~S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 183 ---GSFYSTWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMIV 222 (327)
T ss_dssp ---SSEEEEECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEEE
T ss_pred ---CcEEEEeCCCCCceeECCC----CCCCccceeEECCCCCEEEEe
Confidence 235554333 578998864 223333444444456677665
No 76
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=86.64 E-value=12 Score=30.84 Aligned_cols=59 Identities=10% Similarity=0.112 Sum_probs=33.0
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEec
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIE 205 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~ 205 (265)
..++.+|+.+++...+... .. ....... +++.++++..... ...|+.+|+.+..-+.+.
T Consensus 247 ~~i~~~d~~~~~~~~l~~~----~~-~~~~~~~spdg~~l~~~s~~~g------~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDG----RS-NNTEPTWFPDSQNLAFTSDQAG------RPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp CEEEEEETTTCCEEECCCC----SS-CEEEEEECTTSSEEEEEECTTS------SCEEEEEETTSSCCEECC
T ss_pred ceEEEEECCCCCEEeCcCC----CC-cccceEECCCCCEEEEEECCCC------CcEEEEEECCCCCEEEEe
Confidence 5699999998876555322 11 1122222 4544444432111 246899999887755544
No 77
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=86.63 E-value=12 Score=30.69 Aligned_cols=67 Identities=12% Similarity=0.092 Sum_probs=41.0
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCC-----CCCCCcCceEEEE-CCEEEEEcCccCCCCccc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKD-----TPPSRSGHRMIAL-KKHLVVFGGFHDNLREAK 186 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-----~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~ 186 (265)
.++++|++-| +..|+||..+++-..-.+.. .-.+..-.++... ++++|.|=|
T Consensus 283 ~~~~~yfFkG-------------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg--------- 340 (365)
T 3ba0_A 283 RFYRTYFFVD-------------NQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG--------- 340 (365)
T ss_dssp TTTEEEEEET-------------TEEEEEETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET---------
T ss_pred CCCEEEEEEC-------------CEEEEEeCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC---------
Confidence 3689999976 45899997665322110110 0011222355555 789999977
Q ss_pred cCCceEEEEcCCCceEE
Q psy14331 187 YYNDVHIFDLETYAWKK 203 (265)
Q Consensus 187 ~~~~v~~y~~~~~~W~~ 203 (265)
+..|+||..+.+-..
T Consensus 341 --~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 341 --SNQFEYDFLLQRITK 355 (365)
T ss_dssp --TEEEEEETTTTEEEE
T ss_pred --CEEEEEECCccEEec
Confidence 468999988877655
No 78
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=86.54 E-value=12 Score=30.51 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=36.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++.+++.|+.+ ..+..+|+.+++-...-............+..-++.+++.|..... -..|..
T Consensus 187 ~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~------d~~i~i 249 (402)
T 2aq5_A 187 DGALICTSCRD-----------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS------ERQVAL 249 (402)
T ss_dssp TSSCEEEEETT-----------SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC------CEEEEE
T ss_pred CCCEEEEEecC-----------CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC------CceEEE
Confidence 55666666642 4588999988754332211111111121222236777777621111 246888
Q ss_pred EEcCCCc
Q psy14331 194 FDLETYA 200 (265)
Q Consensus 194 y~~~~~~ 200 (265)
||+.+..
T Consensus 250 wd~~~~~ 256 (402)
T 2aq5_A 250 WDTKHLE 256 (402)
T ss_dssp EETTBCS
T ss_pred EcCcccc
Confidence 9987743
No 79
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=86.18 E-value=9.7 Score=29.16 Aligned_cols=91 Identities=8% Similarity=0.020 Sum_probs=48.2
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.||+.... ...+.++|+ +++........ ....-..++.. ++.+|+.... .+.++
T Consensus 109 ~g~l~v~~~~-----------~~~i~~~d~-~g~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~---------~~~i~ 165 (299)
T 2z2n_A 109 NGDIWFTEMN-----------GNRIGRITD-DGKIREYELPN--KGSYPSFITLGSDNALWFTENQ---------NNAIG 165 (299)
T ss_dssp TSCEEEEETT-----------TTEEEEECT-TCCEEEEECSS--TTCCEEEEEECTTSCEEEEETT---------TTEEE
T ss_pred CCCEEEEecC-----------CceEEEECC-CCCEEEecCCC--CCCCCceEEEcCCCCEEEEeCC---------CCEEE
Confidence 5788887532 245888988 66655543221 11122233333 5678875421 25688
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
++|+ +.+........ . ...-..++.-.++.+|+..
T Consensus 166 ~~~~-~g~~~~~~~~~--~-~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 166 RITE-SGDITEFKIPT--P-ASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp EECT-TCCEEEEECSS--T-TCCEEEEEECTTSSEEEEE
T ss_pred EEcC-CCcEEEeeCCC--C-CCcceeEEECCCCCEEEEc
Confidence 9998 77776653211 1 1111233333356787764
No 80
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=86.11 E-value=16 Score=31.61 Aligned_cols=86 Identities=12% Similarity=0.121 Sum_probs=41.8
Q ss_pred CCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CC-EEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCC
Q psy14331 135 YKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KK-HLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPA 212 (265)
Q Consensus 135 ~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~ 212 (265)
.+.++.+|..+.+-..+.... ..+.-+.++.. ++ .+|+.... .+.|..+|+.+.+-...-..+..|.
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~spdg~~l~va~~~---------~~~v~v~D~~tg~l~~~i~~g~~ph 369 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDSSHRYFMTAANN---------SNKVAVIDSKDRRLSALVDVGKTPH 369 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE--CCSSCCCEEECTTSCEEEEEEGG---------GTEEEEEETTTTEEEEEEECSSSBC
T ss_pred CCeEEEEEecCCCcceeEEec--cCcCccCceECCCCCEEEEEecC---------CCeEEEEECCCCeEEEeeccCCCCC
Confidence 356888988764321111111 12222333333 34 45554432 3568889999886554333333344
Q ss_pred CCCCceEEEeCC-CeEEEEcC
Q psy14331 213 PRSGCQMAATPD-GKILISGG 232 (265)
Q Consensus 213 ~~~~~~~~~~~~-~~iyi~GG 232 (265)
+..+... ...+ +.+|+.+.
T Consensus 370 ~g~g~~~-~~p~~g~~~~s~~ 389 (543)
T 1nir_A 370 PGRGANF-VHPKYGPVWSTSH 389 (543)
T ss_dssp CTTCEEE-EETTTEEEEEEEB
T ss_pred CCCCccc-CCCCCccEEEecc
Confidence 4333332 2223 56777654
No 81
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=86.04 E-value=8.6 Score=28.41 Aligned_cols=94 Identities=12% Similarity=0.232 Sum_probs=49.2
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcE-EEEecCCCCCC--CcCceEEEECCEEEEEcCccCCCCccccCCc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW-EKIVCKDTPPS--RSGHRMIALKKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~~~p~~--~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
++++|++-| +..|+|+..+..- +.+...+.|.. ....+....++++|+|-| +.
T Consensus 64 ~~~~yfFkG-------------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-----------~~ 119 (195)
T 1itv_A 64 SKKLFFFSG-------------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-----------RR 119 (195)
T ss_dssp TCCEEEEET-------------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-----------TE
T ss_pred CCeEEEEeC-------------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-----------CE
Confidence 678999977 3477887542111 01111223332 223223222679999977 36
Q ss_pred eEEEEcCCCceE-----Eec-cCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 191 VHIFDLETYAWK-----KIE-PLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 191 v~~y~~~~~~W~-----~~~-~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.|+||..+++=. .+. .-+.+|. .-.++... ++.+|.+-|..
T Consensus 120 ywr~d~~~~~~~~gyPr~i~~~w~Gvp~--~idaa~~~-~g~~Yffkg~~ 166 (195)
T 1itv_A 120 LWRFDVKAQMVDPRSASEVDRMFPGVPL--DTHDVFQF-REKAYFCQDRF 166 (195)
T ss_dssp EEEEETTTTEECGGGCEEHHHHSTTSCS--SCSEEEEE-TTEEEEEETTE
T ss_pred EEEEeCCcccccCCCccChhhcCCCCCC--CCCEEEEe-CCeEEEEeCCE
Confidence 789998765422 111 1111222 22344444 68999987754
No 82
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=85.94 E-value=19 Score=32.28 Aligned_cols=114 Identities=12% Similarity=0.107 Sum_probs=65.0
Q ss_pred CCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCCCc--------cccceEEEecCCCEEEEEcCc
Q psy14331 58 DKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPPPR--------CSHQMVALSADKGQLWMFGGE 123 (265)
Q Consensus 58 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~~r--------~~~~~~~~~~~~~~iyv~GG~ 123 (265)
.++.||+... ...++.+|. |......+... ...+.+.. +++||+...
T Consensus 69 ~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~v~v~~~- 129 (689)
T 1yiq_A 69 VDGVMYTTGP---------------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW---KGKVYVGVL- 129 (689)
T ss_dssp ETTEEEEECG---------------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECT-
T ss_pred ECCEEEEEcC---------------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE---CCEEEEEcc-
Confidence 3899999766 456888887 77654433110 11122333 788888653
Q ss_pred ccCCCccccccCCceeEEEcCCCc--EEEEec-CCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCc
Q psy14331 124 FSSASESQFHHYKDLWVFRMGEKK--WEKIVC-KDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYA 200 (265)
Q Consensus 124 ~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~-~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~ 200 (265)
-..+..+|..+++ |+.-.. ..........+.++.++.+|+-.+.... ..-..|+.||+.+.+
T Consensus 130 -----------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~----~~~g~v~a~D~~tG~ 194 (689)
T 1yiq_A 130 -----------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF----GVRGYVTAYDAETGK 194 (689)
T ss_dssp -----------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT----CCBCEEEEEETTTCC
T ss_pred -----------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc----CCCCEEEEEECCCCc
Confidence 2458999998874 876543 1100111222345568888773221111 123579999998865
Q ss_pred --eEEec
Q psy14331 201 --WKKIE 205 (265)
Q Consensus 201 --W~~~~ 205 (265)
|+.-.
T Consensus 195 ~~W~~~~ 201 (689)
T 1yiq_A 195 EAWRFYT 201 (689)
T ss_dssp EEEEEES
T ss_pred EEEEecc
Confidence 87653
No 83
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=85.88 E-value=9.6 Score=30.46 Aligned_cols=123 Identities=13% Similarity=0.041 Sum_probs=59.2
Q ss_pred eeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----e---ecCCCCCCCccccceEEEecCCCEEEEEcCc
Q psy14331 51 FSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----F---VSAPGAPPPRCSHQMVALSADKGQLWMFGGE 123 (265)
Q Consensus 51 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w---~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~ 123 (265)
..+++.|+++.+|+.+.. .+.+..||. . ......+........+.+...++.||+....
T Consensus 214 ~~~~~spdg~~l~v~~~~--------------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEI--------------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp EEEEECTTSSEEEEEETT--------------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred eEEEEcCCCCEEEEEcCC--------------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 345666677778887531 345667766 1 1122222222222344455445567765432
Q ss_pred ccCCCccccccCCceeEEEc--CCCcEEEEecCCCCCCCcCceEEEE-CC-EEEEEcCccCCCCccccCCceEEEEcCCC
Q psy14331 124 FSSASESQFHHYKDLWVFRM--GEKKWEKIVCKDTPPSRSGHRMIAL-KK-HLVVFGGFHDNLREAKYYNDVHIFDLETY 199 (265)
Q Consensus 124 ~~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~~~p~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~v~~y~~~~~ 199 (265)
. .+.+.+|+. .+++++.+.... ....-..++.. ++ .||+.+.. .. .-.++.+|+.+.
T Consensus 280 ~----------~~~i~v~~~~~~~g~~~~~~~~~--~g~~~~~~~~spdg~~l~~~~~~-~~------~v~v~~~d~~~g 340 (361)
T 3scy_A 280 K----------ADGVAIFKVDETNGTLTKVGYQL--TGIHPRNFIITPNGKYLLVACRD-TN------VIQIFERDQATG 340 (361)
T ss_dssp S----------SCEEEEEEECTTTCCEEEEEEEE--CSSCCCEEEECTTSCEEEEEETT-TT------EEEEEEECTTTC
T ss_pred C----------CCEEEEEEEcCCCCcEEEeeEec--CCCCCceEEECCCCCEEEEEECC-CC------CEEEEEEECCCC
Confidence 0 134555555 567776665432 11111123332 44 45554432 11 123455677777
Q ss_pred ceEEecc
Q psy14331 200 AWKKIEP 206 (265)
Q Consensus 200 ~W~~~~~ 206 (265)
+-+.+..
T Consensus 341 ~~~~~~~ 347 (361)
T 3scy_A 341 LLTDIKK 347 (361)
T ss_dssp CEEECSC
T ss_pred cEeecce
Confidence 7766653
No 84
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=85.75 E-value=11 Score=30.44 Aligned_cols=99 Identities=6% Similarity=0.031 Sum_probs=46.2
Q ss_pred HHHhhcccceEEEeccCCCC-----CCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEee---ecCCCC
Q psy14331 27 IEAEEKRKNKVIEKVVPEPT-----RRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNLF---VSAPGA 98 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~-----~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~w---~~~~~~ 98 (265)
+..+|..+.+..... ..+. ...-.++++.+++..+++.|+. ++. ...+..||+- .....+
T Consensus 190 v~iwd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~---------~~~i~~~d~~~~~~~~~~~ 257 (416)
T 2pm9_A 190 ASIWDLKAKKEVIHL-SYTSPNSGIKQQLSVVEWHPKNSTRVATATG--SDN---------DPSILIWDLRNANTPLQTL 257 (416)
T ss_dssp EEEEETTTTEEEEEE-CCCCCSSCCCCCEEEEEECSSCTTEEEEEEC--CSS---------SCCCCEEETTSTTSCSBCC
T ss_pred EEEEECCCCCcceEE-eccccccccCCceEEEEECCCCCCEEEEEEC--CCC---------CceEEEEeCCCCCCCcEEe
Confidence 555666665543322 1221 2222344555455567777762 221 1266777771 111112
Q ss_pred C-CCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcE
Q psy14331 99 P-PPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW 148 (265)
Q Consensus 99 p-~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W 148 (265)
. .....-..+.+...++.+++.|+.+ ..+..+|+.+.+-
T Consensus 258 ~~~~~~~v~~~~~s~~~~~~l~s~~~d-----------g~v~~wd~~~~~~ 297 (416)
T 2pm9_A 258 NQGHQKGILSLDWCHQDEHLLLSSGRD-----------NTVLLWNPESAEQ 297 (416)
T ss_dssp CSCCSSCEEEEEECSSCSSCEEEEESS-----------SEEEEECSSSCCE
T ss_pred ecCccCceeEEEeCCCCCCeEEEEeCC-----------CCEEEeeCCCCcc
Confidence 1 1111222233322256677776642 4588888877653
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=85.48 E-value=13 Score=29.90 Aligned_cols=28 Identities=7% Similarity=0.023 Sum_probs=15.5
Q ss_pred EEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCC
Q psy14331 108 VALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK 146 (265)
Q Consensus 108 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~ 146 (265)
+.+...+..+++.|+.+ ..+..||+.+.
T Consensus 192 ~~~~~~~~~ll~~~~~d-----------g~i~i~d~~~~ 219 (408)
T 4a11_B 192 VSWSPRYDYILATASAD-----------SRVKLWDVRRA 219 (408)
T ss_dssp EEECSSCTTEEEEEETT-----------SCEEEEETTCS
T ss_pred EEECCCCCcEEEEEcCC-----------CcEEEEECCCC
Confidence 33333334467777642 34777887654
No 86
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=85.47 E-value=13 Score=30.04 Aligned_cols=147 Identities=12% Similarity=0.103 Sum_probs=75.8
Q ss_pred eEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-------eecCCCCCCCccccceEEEecCCCEEEEEcCccc
Q psy14331 53 FLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-------FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 53 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-------w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
+++. ..+.+||.+-. . +..++++++ |....+....+.+...+++...++.|++..+
T Consensus 142 vavD-~~GnaYVt~s~--~-----------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~--- 204 (334)
T 2p9w_A 142 SAQD-RDGNSYVAFAL--G-----------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG--- 204 (334)
T ss_dssp EEEC-TTSCEEEEEEE--S-----------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS---
T ss_pred eEEC-CCCCEEEeCCC--C-----------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC---
Confidence 4444 57789997652 0 156788777 4433333445667777777655667777755
Q ss_pred CCCccccccCCceeEEEcCCCcEEEEecC--CCC-CCCcCce--EEEECCEEEEEcCccCCCCccccCCceEEEEcCCCc
Q psy14331 126 SASESQFHHYKDLWVFRMGEKKWEKIVCK--DTP-PSRSGHR--MIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYA 200 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~--~~p-~~~~~~~--~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~ 200 (265)
...+++||+.+-...+++.. +.. .....-. ....+++++++.-. .+.++.+--..+
T Consensus 205 ---------~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~---------~~~~~~l~S~Dg- 265 (334)
T 2p9w_A 205 ---------PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR---------APYAISFRSWDN- 265 (334)
T ss_dssp ---------SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE---------TTEEEEEECSST-
T ss_pred ---------CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC---------CCCEEEEECCCC-
Confidence 24588999874322122211 100 0001112 22247777555432 122333333333
Q ss_pred eEEeccCCCCCCC--CCCceEEEe----CCCeEEEEcCccc
Q psy14331 201 WKKIEPLGAGPAP--RSGCQMAAT----PDGKILISGGYSK 235 (265)
Q Consensus 201 W~~~~~~~~~p~~--~~~~~~~~~----~~~~iyi~GG~~~ 235 (265)
|+.....+..|.. -.+.+++++ .+++||++.++-.
T Consensus 266 W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 266 WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCGG
T ss_pred cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeecC
Confidence 8766554433332 234444444 5789999876543
No 87
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=85.46 E-value=18 Score=31.66 Aligned_cols=112 Identities=11% Similarity=0.125 Sum_probs=58.6
Q ss_pred CCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCCCc------cccceEEEecCCCEEEEEcCccc
Q psy14331 58 DKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPPPR------CSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 58 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~~r------~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
.+++||+... .+.++.+|. |......+... .....++. +++||+...
T Consensus 67 ~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~---~~~v~~~t~--- 125 (582)
T 1flg_A 67 SDGVIYVTAS---------------YSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY---GDKVFFGTL--- 125 (582)
T ss_dssp ETTEEEEEET---------------TTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE---TTEEEEEET---
T ss_pred ECCEEEEEcC---------------CCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE---CCEEEEEeC---
Confidence 3899999766 234777777 65543332211 11222333 888888532
Q ss_pred CCCccccccCCceeEEEcCCCc--EEEEecCCCCCCCcCceEEEECC------EEEEEcCccCCCCccccCCceEEEEcC
Q psy14331 126 SASESQFHHYKDLWVFRMGEKK--WEKIVCKDTPPSRSGHRMIALKK------HLVVFGGFHDNLREAKYYNDVHIFDLE 197 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~p~~~~~~~~~~~~~------~iyv~GG~~~~~~~~~~~~~v~~y~~~ 197 (265)
-..++.+|..+++ |+.-.......-....+-++.++ .+|+ |..... ......|+.||+.
T Consensus 126 ---------dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e---~~~~g~v~alD~~ 192 (582)
T 1flg_A 126 ---------DASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDE---FGVVGRLFARDPD 192 (582)
T ss_dssp ---------TTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGG---GCCBCEEEEECTT
T ss_pred ---------CCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccc---cCCCCEEEEEECC
Confidence 2468999998874 87643211000001112233444 5554 432111 0123579999998
Q ss_pred CC--ceEE
Q psy14331 198 TY--AWKK 203 (265)
Q Consensus 198 ~~--~W~~ 203 (265)
+. .|+.
T Consensus 193 tG~~~W~~ 200 (582)
T 1flg_A 193 TGEEIWMR 200 (582)
T ss_dssp TCCEEEEE
T ss_pred CCCEEeec
Confidence 75 4865
No 88
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.39 E-value=20 Score=32.17 Aligned_cols=96 Identities=14% Similarity=0.069 Sum_probs=45.7
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE---CCEEEEEcCccCCCCccccCCc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL---KKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
++.+++.|+.+ ..+..+|..+..-....... .......++.. ++..++.|+.+ ..
T Consensus 152 ~~~~l~~~~~d-----------g~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d---------g~ 209 (814)
T 3mkq_A 152 DPSTFASGCLD-----------RTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDD---------LT 209 (814)
T ss_dssp EEEEEEEEETT-----------SEEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTT---------SE
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCC---------CE
Confidence 45666666642 45788887655322221111 11111222222 55667777643 35
Q ss_pred eEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 191 VHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 191 v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
+..||..+.+-...-.. ....-..++...++.+++.|+.+.
T Consensus 210 i~~~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 210 IKIWDYQTKSCVATLEG----HMSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp EEEEETTTTEEEEEEEC----CSSCEEEEEECSSSSEEEEEETTS
T ss_pred EEEEECCCCcEEEEEcC----CCCCEEEEEEcCCCCEEEEEeCCC
Confidence 78888877553222110 111112333344566677766543
No 89
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.11 E-value=11 Score=28.62 Aligned_cols=60 Identities=5% Similarity=-0.059 Sum_probs=32.3
Q ss_pred CCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CC-EEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 135 YKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KK-HLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 135 ~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
...++.++..+..-+.+... .. ...+... ++ .+++.+..+. ...++.+++.+.....+..
T Consensus 109 ~~~l~~~~~~~~~~~~~~~~---~~--~~~~~~spdg~~l~~~~~~~~-------~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 109 KSAIYLLPSTGGTPRLMTKN---LP--SYWHGWSPDGKSFTYCGIRDQ-------VFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp SCEEEEEETTCCCCEECCSS---SS--EEEEEECTTSSEEEEEEEETT-------EEEEEEEETTTCCEEECCC
T ss_pred cceEEEEECCCCceEEeecC---CC--ccceEECCCCCEEEEEECCCC-------ceEEEEEECCCCcceEccc
Confidence 46789999887765544322 11 1122222 33 4554454322 1357778887777665554
No 90
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=85.06 E-value=21 Score=31.95 Aligned_cols=115 Identities=10% Similarity=0.129 Sum_probs=65.8
Q ss_pred CCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCCCc--------cccceEEEecCCCEEEEEcCc
Q psy14331 58 DKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPPPR--------CSHQMVALSADKGQLWMFGGE 123 (265)
Q Consensus 58 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~~r--------~~~~~~~~~~~~~~iyv~GG~ 123 (265)
.++.||+... .+.++.+|. |......+... .....+.. +++||+...
T Consensus 76 ~~g~vyv~~~---------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~---~~~v~v~~~- 136 (677)
T 1kb0_A 76 VDGIMYVSAS---------------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW---KGKVYVGAW- 136 (677)
T ss_dssp ETTEEEEECG---------------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE---TTEEEEECT-
T ss_pred ECCEEEEECC---------------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE---CCEEEEEcC-
Confidence 3899999876 357888887 76654433211 11223332 788888743
Q ss_pred ccCCCccccccCCceeEEEcCCCc--EEEEecCCCCC-CCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCc
Q psy14331 124 FSSASESQFHHYKDLWVFRMGEKK--WEKIVCKDTPP-SRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYA 200 (265)
Q Consensus 124 ~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~p~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~ 200 (265)
-..++.+|..+++ |+.-.....+. .....+.++.++.+|+-.+.... .....|+.||..+.+
T Consensus 137 -----------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~----~~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 137 -----------DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY----GVRGYITAYDAETGE 201 (677)
T ss_dssp -----------TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT----CCBCEEEEEETTTCC
T ss_pred -----------CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccccc----CCCCEEEEEECCCCc
Confidence 2468999998774 87643201000 11222334568888774432111 124679999998764
Q ss_pred --eEEecc
Q psy14331 201 --WKKIEP 206 (265)
Q Consensus 201 --W~~~~~ 206 (265)
|+.-..
T Consensus 202 ~~W~~~~~ 209 (677)
T 1kb0_A 202 RKWRWFSV 209 (677)
T ss_dssp EEEEEESS
T ss_pred EEEEeccC
Confidence 876543
No 91
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=84.89 E-value=10 Score=32.22 Aligned_cols=59 Identities=12% Similarity=0.195 Sum_probs=38.7
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++++|++-| +..|+||..+.+.....-...| . .-++...++++|+|-| +..++
T Consensus 158 ~~~~yfFkG-------------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG-----------~~y~r 210 (460)
T 1qhu_A 158 DEGILFFQG-------------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG-----------NQFLR 210 (460)
T ss_dssp SSEEEEEET-------------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET-----------TEEEE
T ss_pred CCeEEEEec-------------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC-----------CEEEE
Confidence 567888877 3489999988765543222222 2 3456666899999988 35677
Q ss_pred EEcCCC
Q psy14331 194 FDLETY 199 (265)
Q Consensus 194 y~~~~~ 199 (265)
||+.+.
T Consensus 211 fd~~~~ 216 (460)
T 1qhu_A 211 FNPVSG 216 (460)
T ss_dssp ECTTTC
T ss_pred EcCccC
Confidence 776553
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=84.53 E-value=8.2 Score=30.54 Aligned_cols=57 Identities=19% Similarity=0.177 Sum_probs=28.9
Q ss_pred CEEEEEcCccCCCCccccCCceEEEEcCCCceE--EeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 170 KHLVVFGGFHDNLREAKYYNDVHIFDLETYAWK--KIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 170 ~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~--~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
+.+++.|+.+ ..|..||+.+.+-. .+...........-..+....++++++.|+.+.
T Consensus 299 ~~~l~~~~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 357 (366)
T 3k26_A 299 QKMLALGNQV---------GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA 357 (366)
T ss_dssp SSEEEEECTT---------SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred CcEEEEEecC---------CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCC
Confidence 6677777653 35888998875421 111211011012223334444677777777643
No 93
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=83.86 E-value=13 Score=28.53 Aligned_cols=95 Identities=16% Similarity=0.234 Sum_probs=49.9
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
+++||+.... ...+.+||+.......+.... ....-.+++.. ++.+|+.... .+.|.
T Consensus 131 ~g~l~v~~~~-----------~~~i~~~~~~g~~~~~~~~~~--~~~~p~~i~~~~~g~l~v~~~~---------~~~i~ 188 (286)
T 1q7f_A 131 KGRIIVVECK-----------VMRVIIFDQNGNVLHKFGCSK--HLEFPNGVVVNDKQEIFISDNR---------AHCVK 188 (286)
T ss_dssp TSCEEEEETT-----------TTEEEEECTTSCEEEEEECTT--TCSSEEEEEECSSSEEEEEEGG---------GTEEE
T ss_pred CCCEEEEECC-----------CCEEEEEcCCCCEEEEeCCCC--ccCCcEEEEECCCCCEEEEECC---------CCEEE
Confidence 5678887542 256889997665444443211 11111223333 5788886542 35689
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGY 233 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~ 233 (265)
+||+.......+...+.. ..-.+++.-.++.+|+....
T Consensus 189 ~~~~~g~~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 189 VFNYEGQYLRQIGGEGIT---NYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp EEETTCCEEEEESCTTTS---CSEEEEEECTTCCEEEEECS
T ss_pred EEcCCCCEEEEEccCCcc---CCCcEEEECCCCCEEEEeCC
Confidence 999876554554432111 11123444346678877643
No 94
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=83.68 E-value=9.8 Score=34.39 Aligned_cols=55 Identities=20% Similarity=0.160 Sum_probs=27.6
Q ss_pred CEEEEEcCccCCCCccccCCceEEEEcCCC--ceEEeccCCCCCCCCCCceEEEeCC---CeEEEEcCccc
Q psy14331 170 KHLVVFGGFHDNLREAKYYNDVHIFDLETY--AWKKIEPLGAGPAPRSGCQMAATPD---GKILISGGYSK 235 (265)
Q Consensus 170 ~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~--~W~~~~~~~~~p~~~~~~~~~~~~~---~~iyi~GG~~~ 235 (265)
+.+++.|+.+ ..|..||..+. .+..+.... .....-.+++...+ +.+++.||.+.
T Consensus 170 ~~~l~sgs~d---------g~I~iwd~~~~~~~~~~~~~~~--~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 170 SRKFVTGGAD---------NLVKIWKYNSDAQTYVLESTLE--GHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp GCCEEEEETT---------SCEEEEEEETTTTEEEEEEEEC--CCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred CCEEEEEECC---------CeEEEEeccCCcccceeeeeec--CCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 4566666653 34677777653 444444321 11122233333334 67777777653
No 95
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=83.20 E-value=13 Score=28.04 Aligned_cols=96 Identities=14% Similarity=0.236 Sum_probs=49.7
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCc---EEEEecCCCCCCC-cCceEEEE--CCEEEEEcCccCCCCccc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKK---WEKIVCKDTPPSR-SGHRMIAL--KKHLVVFGGFHDNLREAK 186 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~---W~~~~~~~~p~~~-~~~~~~~~--~~~iyv~GG~~~~~~~~~ 186 (265)
.++++|++-| +..|+|+..+-. =+.+.....|... .-.++... ++++|+|-|
T Consensus 86 ~~~k~yfFkG-------------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------- 143 (218)
T 1gen_A 86 QEEKAVFFAG-------------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------- 143 (218)
T ss_dssp TTTEEEEEET-------------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET---------
T ss_pred CCCEEEEEeC-------------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC---------
Confidence 3689999977 347888742100 0111111222211 12344443 689999977
Q ss_pred cCCceEEEEcCCCceE-----Eec-cCCCCCCCCCCceEEEeC-CCeEEEEcCcc
Q psy14331 187 YYNDVHIFDLETYAWK-----KIE-PLGAGPAPRSGCQMAATP-DGKILISGGYS 234 (265)
Q Consensus 187 ~~~~v~~y~~~~~~W~-----~~~-~~~~~p~~~~~~~~~~~~-~~~iyi~GG~~ 234 (265)
+..|+||..+++-. .+. .-..+|. .-.++.... ++.+|.+-|..
T Consensus 144 --~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~--~idaAf~~~~~g~~YfFkg~~ 194 (218)
T 1gen_A 144 --DKFWRYNEVKKKMDPGFPKLIADAWNAIPD--NLDAVVDLQGGGHSYFFKGAY 194 (218)
T ss_dssp --TEEEEEETTTTEECSSCCEEHHHHSSSCCS--SCSEEEECTTTCEEEEEETTE
T ss_pred --CEEEEEECccccccCCCCcchhhccCCCCC--CCCEEEEEcCCCcEEEEECCE
Confidence 46889998775422 111 1111222 223444443 47899986653
No 96
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=83.16 E-value=11 Score=31.86 Aligned_cols=66 Identities=14% Similarity=0.231 Sum_probs=41.0
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEE-----EEe-cC-CCCCCCcCceEEEECCEEEEEcCccCCCCcc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWE-----KIV-CK-DTPPSRSGHRMIALKKHLVVFGGFHDNLREA 185 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~-----~~~-~~-~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 185 (265)
.++++|+|-| +..|+||..+++-. .+. .. ..|. . -.+++..++++|.|-|
T Consensus 366 ~~~k~yfFkG-------------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~-~-iDAA~~~~g~~YFFkg-------- 422 (450)
T 1su3_A 366 NTGKTYFFVA-------------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH-K-VDAVFMKDGFFYFFHG-------- 422 (450)
T ss_dssp TTTEEEEEET-------------TEEEEEETTTTEECSSCSEEHHHHSTTSCS-C-CSEEEEETTEEEEEET--------
T ss_pred CCCeEEEEeC-------------CEEEEEeCCCccccCCCCcchhhcCCCCCC-C-ccEEEEcCCeEEEEeC--------
Confidence 4689999977 45899987654321 111 11 1222 2 2345556899999987
Q ss_pred ccCCceEEEEcCCCceEEe
Q psy14331 186 KYYNDVHIFDLETYAWKKI 204 (265)
Q Consensus 186 ~~~~~v~~y~~~~~~W~~~ 204 (265)
+..|+||..+.+=...
T Consensus 423 ---~~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 423 ---TRQYKFDPKTKRILTL 438 (450)
T ss_dssp ---TEEEEEETTTTEEEEE
T ss_pred ---CEEEEEECCcceEecc
Confidence 4678999887765543
No 97
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=82.11 E-value=14 Score=27.82 Aligned_cols=90 Identities=8% Similarity=0.004 Sum_probs=46.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.||+... . ..+.+||+.+......... ....-..++.. ++.+|+.... ...|.
T Consensus 77 ~g~l~v~~~-~-----------~~i~~~d~~~~~~~~~~~~---~~~~p~~i~~~~~g~l~v~~~~---------~~~i~ 132 (270)
T 1rwi_B 77 AGTVYVTDF-N-----------NRVVTLAAGSNNQTVLPFD---GLNYPEGLAVDTQGAVYVADRG---------NNRVV 132 (270)
T ss_dssp TCCEEEEET-T-----------TEEEEECTTCSCCEECCCC---SCSSEEEEEECTTCCEEEEEGG---------GTEEE
T ss_pred CCCEEEEcC-C-----------CEEEEEeCCCceEeeeecC---CcCCCcceEECCCCCEEEEECC---------CCEEE
Confidence 567888754 1 3588899877654433211 11112233333 5678886432 24578
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
+++..+......... ....-..++.-.++++|+..
T Consensus 133 ~~~~~~~~~~~~~~~----~~~~p~~i~~~~~g~l~v~~ 167 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFT----GLNDPDGVAVDNSGNVYVTD 167 (270)
T ss_dssp EECTTCCSCEECCCC----SCCSCCCEEECTTCCEEEEE
T ss_pred EEECCCceeEeeccc----cCCCceeEEEeCCCCEEEEE
Confidence 887666554433221 10111233433456777764
No 98
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=81.70 E-value=27 Score=30.84 Aligned_cols=64 Identities=9% Similarity=0.097 Sum_probs=34.3
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCC-ceEEec
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETY-AWKKIE 205 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~-~W~~~~ 205 (265)
..++++|+.+++-..+.... ........+.. +++.++++..+... ....|+.+|+.+. ..+.+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~----~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGE--PKEKFLTNLSWSPDENILYVAEVNRAQ----NECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEEEEEETTTTEEEECCCCS--CTTCEEEEEEECTTSSEEEEEEECTTS----CEEEEEEEETTTCCEEEEEE
T ss_pred eEEEEEECCCCceEeeccCC--CCceeEeeEEEECCCCEEEEEEeCCCC----CeeEEEEEECCCCceeeEEE
Confidence 56889999888755543211 11111122222 45444444433221 1357899999987 666654
No 99
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=81.64 E-value=30 Score=31.32 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=51.0
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecC-CCC-CC-CcCceEEEE-CCEEEEEcCccCCCCccccC
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCK-DTP-PS-RSGHRMIAL-KKHLVVFGGFHDNLREAKYY 188 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-~~p-~~-~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~ 188 (265)
.++.|++... ..+++||+.++++ ..... ..+ .+ ..-.+++.. ++.|++-..
T Consensus 507 ~~g~lWigt~-------------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~----------- 561 (795)
T 4a2l_A 507 SHKRLWIGGE-------------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR----------- 561 (795)
T ss_dssp TTCCEEEEES-------------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-----------
T ss_pred CCCCEEEEeC-------------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-----------
Confidence 3677877543 2388899988887 44321 000 11 111122222 456776331
Q ss_pred CceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 189 NDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 189 ~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
..+++||+.+.+++.......+|.... .+++.-.++.|++.+
T Consensus 562 ~Gl~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 562 EGFYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLST 603 (795)
T ss_dssp SCEEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEE
T ss_pred CCceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEc
Confidence 258899999999988765433444322 333333356788765
No 100
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=81.61 E-value=22 Score=32.03 Aligned_cols=99 Identities=11% Similarity=0.088 Sum_probs=46.1
Q ss_pred CEEEEEcCcccCCCccccccCCceeEEEcCCC--cEEEEecCCCCCCCcCceEEEE-C---CEEEEEcCccCCCCccccC
Q psy14331 115 GQLWMFGGEFSSASESQFHHYKDLWVFRMGEK--KWEKIVCKDTPPSRSGHRMIAL-K---KHLVVFGGFHDNLREAKYY 188 (265)
Q Consensus 115 ~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~p~~~~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~ 188 (265)
+.+++.|+.+ ..+..||..++ .+..+..... ....-.+++.. + +.+++.|+.++
T Consensus 170 ~~~l~sgs~d-----------g~I~iwd~~~~~~~~~~~~~~~~-h~~~V~~l~~sp~~~~~~~l~s~s~Dg-------- 229 (753)
T 3jro_A 170 SRKFVTGGAD-----------NLVKIWKYNSDAQTYVLESTLEG-HSDWVRDVAWSPTVLLRSYLASVSQDR-------- 229 (753)
T ss_dssp GCCEEEEETT-----------SCEEEEEEETTTTEEEEEEEECC-CSSCEEEEEECCCCSSSEEEEEEESSS--------
T ss_pred CCEEEEEECC-----------CeEEEEeccCCcccceeeeeecC-CCCcEEEEEeccCCCCCCEEEEEecCC--------
Confidence 5566666642 34667776544 4444433321 11111122222 4 67888887643
Q ss_pred CceEEEEcCCCc--eEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 189 NDVHIFDLETYA--WKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 189 ~~v~~y~~~~~~--W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
.|..||+.+.. +....... ......-.+++...++..++.||.++
T Consensus 230 -~I~iwd~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~s~s~Dg 276 (753)
T 3jro_A 230 -TCIIWTQDNEQGPWKKTLLKE-EKFPDVLWRASWSLSGNVLALSGGDN 276 (753)
T ss_dssp -CEEEEEESSSSSCCBCCBSSS-SCCSSCCCCEEECTTTCCEEEECSSS
T ss_pred -EEEEecCCCCCCcceeEEecc-CCCCCceEEEEEcCCCCEEEEEcCCC
Confidence 47778877642 22111110 01111222333344667777776543
No 101
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=81.40 E-value=13 Score=28.67 Aligned_cols=97 Identities=9% Similarity=0.093 Sum_probs=53.0
Q ss_pred EEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccc
Q psy14331 108 VALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAK 186 (265)
Q Consensus 108 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~ 186 (265)
..+...++.||+++.. ...+++||+.++ .+..... ... -.+++.. ++.+|+....
T Consensus 33 ~~~d~~g~~l~~~~~~-----------~~~i~~~~~~~~-~~~~~~~---~~~-~~~l~~~~dg~l~v~~~~-------- 88 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVR-----------QNRTWAWSDDGQ-LSPEMHP---SHH-QNGHCLNKQGHLIACSHG-------- 88 (296)
T ss_dssp EEEEGGGTEEEEEEGG-----------GTEEEEEETTSC-EEEEESS---CSS-EEEEEECTTCCEEEEETT--------
T ss_pred CeEeCCCCEEEEEeCC-----------CCEEEEEECCCC-eEEEECC---CCC-cceeeECCCCcEEEEecC--------
Confidence 3444444558887653 256899999888 5555422 111 1233332 5677775431
Q ss_pred cCCceEEEEcCCCceEEeccCCC-CCCCCCCceEEEeCCCeEEEE
Q psy14331 187 YYNDVHIFDLETYAWKKIEPLGA-GPAPRSGCQMAATPDGKILIS 230 (265)
Q Consensus 187 ~~~~v~~y~~~~~~W~~~~~~~~-~p~~~~~~~~~~~~~~~iyi~ 230 (265)
...|.+||+.+.+.+.+..... .+..+. ..++.-.++.+|+.
T Consensus 89 -~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 89 -LRRLERQREPGGEWESIADSFEGKKLNSP-NDVCLAPDGSLWFS 131 (296)
T ss_dssp -TTEEEEECSTTCCEEEEECEETTEECCCC-CCEEECTTSCEEEE
T ss_pred -CCeEEEEcCCCCcEEEEeeccCCCCCCCC-CCEEECCCCCEEEE
Confidence 2468999998888776643210 111111 23344446778875
No 102
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=81.03 E-value=16 Score=27.59 Aligned_cols=91 Identities=10% Similarity=0.067 Sum_probs=46.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.||+.... ...+.+++..+.......... ...-..++.. ++.+|+.... .+.|.
T Consensus 118 ~g~l~v~~~~-----------~~~i~~~~~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~---------~~~i~ 174 (270)
T 1rwi_B 118 QGAVYVADRG-----------NNRVVKLAAGSKTQTVLPFTG---LNDPDGVAVDNSGNVYVTDTD---------NNRVV 174 (270)
T ss_dssp TCCEEEEEGG-----------GTEEEEECTTCCSCEECCCCS---CCSCCCEEECTTCCEEEEEGG---------GTEEE
T ss_pred CCCEEEEECC-----------CCEEEEEECCCceeEeecccc---CCCceeEEEeCCCCEEEEECC---------CCEEE
Confidence 5678887542 245778877665543322111 1112234443 5678886532 24688
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
+||+.+..-...... .. ..-.+++.-.++.+|+..
T Consensus 175 ~~~~~~~~~~~~~~~---~~-~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 175 KLEAESNNQVVLPFT---DI-TAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp EECTTTCCEEECCCS---SC-CSEEEEEECTTCCEEEEE
T ss_pred EEecCCCceEeeccc---CC-CCceEEEECCCCCEEEEE
Confidence 899887654332221 11 111333333355777765
No 103
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=80.89 E-value=11 Score=30.59 Aligned_cols=105 Identities=8% Similarity=0.091 Sum_probs=48.6
Q ss_pred EEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCcc
Q psy14331 108 VALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREA 185 (265)
Q Consensus 108 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~ 185 (265)
+.+...+..+++.|+.... ...+..||..+..- .+..........-.+++.. ++.+++.|+.+
T Consensus 220 ~~~~~~~~~~l~~~~~d~~--------~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d------ 284 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDN--------DPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD------ 284 (416)
T ss_dssp EEECSSCTTEEEEEECCSS--------SCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS------
T ss_pred EEECCCCCCEEEEEECCCC--------CceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC------
Confidence 3343333457777664321 12578888877531 1111100011111122221 45677777653
Q ss_pred ccCCceEEEEcCCCceE-EeccCCCCCCCCCCceEEEeCCC-eEEEEcCccc
Q psy14331 186 KYYNDVHIFDLETYAWK-KIEPLGAGPAPRSGCQMAATPDG-KILISGGYSK 235 (265)
Q Consensus 186 ~~~~~v~~y~~~~~~W~-~~~~~~~~p~~~~~~~~~~~~~~-~iyi~GG~~~ 235 (265)
..|..||+.+.+-. .+... . ..-..+....++ .+++.|+.+.
T Consensus 285 ---g~v~~wd~~~~~~~~~~~~~---~--~~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 285 ---NTVLLWNPESAEQLSQFPAR---G--NWCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp ---SEEEEECSSSCCEEEEEECS---S--SCCCCEEECTTCTTEEEECCSSS
T ss_pred ---CCEEEeeCCCCccceeecCC---C--CceEEEEECCCCCCEEEEEecCC
Confidence 35788888775432 22221 1 111233334455 6788877653
No 104
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=80.84 E-value=20 Score=28.59 Aligned_cols=158 Identities=12% Similarity=0.076 Sum_probs=77.1
Q ss_pred HHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCC-CCC
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGA-PPP 101 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~-p~~ 101 (265)
++.-...-.+|+.+ . .|....-.++.+. ..+.+|++|- ...+++-.- |+..... +.+
T Consensus 17 ~~~s~d~g~~W~~~-~-~~~~~~~~~v~~~-~~~~~~~~G~---------------~g~i~~s~DgG~tW~~~~~~~~~~ 78 (327)
T 2xbg_A 17 SAIPALDYNPWEAI-Q-LPTTATILDMSFI-DRHHGWLVGV---------------NATLMETRDGGQTWEPRTLVLDHS 78 (327)
T ss_dssp -CCCBCSSCCEEEE-E-CSCSSCEEEEEES-SSSCEEEEET---------------TTEEEEESSTTSSCEECCCCCSCC
T ss_pred eeecCCCCCCceEe-e-cCCCCcEEEEEEC-CCCcEEEEcC---------------CCeEEEeCCCCCCCeECCCCCCCC
Confidence 44444556789874 3 2222222233332 5677888653 123333322 7776432 222
Q ss_pred ccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEE-ECCEEEEEcCccC
Q psy14331 102 RCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIA-LKKHLVVFGGFHD 180 (265)
Q Consensus 102 r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~-~~~~iyv~GG~~~ 180 (265)
......+... ++.+|++|.. ..+++-+-...+|+.+.... +.+-....++. -++.+|+.|..
T Consensus 79 ~~~~~~i~~~--~~~~~~~g~~------------g~i~~S~DgG~tW~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~-- 141 (327)
T 2xbg_A 79 DYRFNSVSFQ--GNEGWIVGEP------------PIMLHTTDGGQSWSQIPLDP-KLPGSPRLIKALGNGSAEMITNV-- 141 (327)
T ss_dssp CCEEEEEEEE--TTEEEEEEET------------TEEEEESSTTSSCEECCCCT-TCSSCEEEEEEEETTEEEEEETT--
T ss_pred CccEEEEEec--CCeEEEEECC------------CeEEEECCCCCCceECcccc-CCCCCeEEEEEECCCCEEEEeCC--
Confidence 2223333343 5788887521 22444333356899986432 11111223333 36788887642
Q ss_pred CCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 181 NLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 181 ~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
..+++-.-.-.+|+.+... .....+.++...++.++++|
T Consensus 142 --------g~v~~S~DgG~tW~~~~~~----~~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 142 --------GAIYRTKDSGKNWQALVQE----AIGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp --------CCEEEESSTTSSEEEEECS----CCCCEEEEEECTTSCEEEEE
T ss_pred --------ccEEEEcCCCCCCEEeecC----CCcceEEEEEcCCCcEEEEE
Confidence 2344443345789998762 22233444444456666665
No 105
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=80.73 E-value=15 Score=27.13 Aligned_cols=62 Identities=16% Similarity=0.274 Sum_probs=37.3
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEE-----EecC-CCCCCCcCceEEEE-CC-EEEEEcCccCCCCc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEK-----IVCK-DTPPSRSGHRMIAL-KK-HLVVFGGFHDNLRE 184 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~-----~~~~-~~p~~~~~~~~~~~-~~-~iyv~GG~~~~~~~ 184 (265)
.++++|++-| +..++||..+++-.. +... +.|. .-.++... ++ ++|.|-|
T Consensus 108 ~~g~~yfFkG-------------~~yw~yd~~~~~v~~gyPk~i~~~~gip~--~idaAf~~~~~~~~YfFkg------- 165 (196)
T 3c7x_A 108 PNGKTYFFRG-------------NKYYRFNEELRAVDSEYPKNIKVWEGIPE--SPRGSFMGSDEVFTYFYKG------- 165 (196)
T ss_dssp TTTEEEEEET-------------TEEEEEETTTTEECTTCSEEGGGSBTCCS--SCSEEEECTTSSEEEEEET-------
T ss_pred cCCEEEEEEC-------------CEEEEEeCCcccccCCCCccHHHCCCcCC--CcceeEEecCCCEEEEEEC-------
Confidence 3689999977 347899987653211 1111 2222 22344444 44 8999977
Q ss_pred cccCCceEEEEcCCCc
Q psy14331 185 AKYYNDVHIFDLETYA 200 (265)
Q Consensus 185 ~~~~~~v~~y~~~~~~ 200 (265)
+..|+||..+.+
T Consensus 166 ----~~y~r~d~~~~~ 177 (196)
T 3c7x_A 166 ----NKYWKFNNQKLK 177 (196)
T ss_dssp ----TEEEEEETTTTE
T ss_pred ----CEEEEEECCcce
Confidence 467899987754
No 106
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=80.67 E-value=32 Score=30.96 Aligned_cols=68 Identities=16% Similarity=0.158 Sum_probs=38.3
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceE
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
.++.|++... .-+.+||+.+++++......+|.. .-.++...++.|++-.. +.+.
T Consensus 526 ~~g~lWigt~-------------~Gl~~~~~~~~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t~-----------~Gl~ 580 (758)
T 3ott_A 526 EDGLLWVGFH-------------GGVMRINPKDESQQSISFGSFSNN-EILSMTCVKNSIWVSTT-----------NGLW 580 (758)
T ss_dssp TTSCEEEEET-------------TEEEEECC--CCCCBCCCCC---C-CEEEEEEETTEEEEEES-----------SCEE
T ss_pred CCCCEEEEec-------------CceEEEecCCCceEEecccCCCcc-ceEEEEECCCCEEEECC-----------CCeE
Confidence 4678886432 237889988887665432222322 22333444778877542 4588
Q ss_pred EEEcCCCceEEec
Q psy14331 193 IFDLETYAWKKIE 205 (265)
Q Consensus 193 ~y~~~~~~W~~~~ 205 (265)
+||+.+.+.+...
T Consensus 581 ~~~~~~~~~~~~~ 593 (758)
T 3ott_A 581 IIDRKTMDARQQN 593 (758)
T ss_dssp EEETTTCCEEEC-
T ss_pred EEcCCCceeEEec
Confidence 9999998876543
No 107
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=80.56 E-value=23 Score=29.27 Aligned_cols=135 Identities=11% Similarity=0.040 Sum_probs=71.7
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe---ee--cCCCC-C
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL---FV--SAPGA-P 99 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~---w~--~~~~~-p 99 (265)
.+..+|+.+.......... ...+ +++.++++.||+... .+ ...++++|. +. ..... +
T Consensus 153 ~I~~id~~~g~~~~~~~~~---~~~~-ia~~~~g~~l~~~d~---~~----------~~~I~~~d~~~~~~~~~~g~~~~ 215 (409)
T 3hrp_A 153 RVRLISVDDNKVTTVHPGF---KGGK-PAVTKDKQRVYSIGW---EG----------THTVYVYMKASGWAPTRIGQLGS 215 (409)
T ss_dssp EEEEEETTTTEEEEEEETC---CBCB-CEECTTSSEEEEEBS---ST----------TCEEEEEEGGGTTCEEEEEECCT
T ss_pred cEEEEECCCCEEEEeeccC---CCCc-eeEecCCCcEEEEec---CC----------CceEEEEEcCCCceeEEeeeccc
Confidence 3667777766655432221 2233 556656777887654 11 126788887 21 22111 1
Q ss_pred -CCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCC-CCCCcC-c-eEEEE--CCEEE
Q psy14331 100 -PPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDT-PPSRSG-H-RMIAL--KKHLV 173 (265)
Q Consensus 100 -~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-p~~~~~-~-~~~~~--~~~iy 173 (265)
.....+.. .++..++.||+.-. ...++++|+.+.....+..... ...... . .++.. ++.||
T Consensus 216 ~~~~~p~~i-av~p~~g~lyv~d~------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 216 TFSGKIGAV-ALDETEEWLYFVDS------------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp TSCSCCCBC-EECTTSSEEEEECT------------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred hhcCCcEEE-EEeCCCCeEEEEEC------------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 12222333 34444688999422 2469999998887655522110 111122 1 34444 57899
Q ss_pred EEcCccCCCCccccCCceEEEEcCCC
Q psy14331 174 VFGGFHDNLREAKYYNDVHIFDLETY 199 (265)
Q Consensus 174 v~GG~~~~~~~~~~~~~v~~y~~~~~ 199 (265)
+.... .+.|+++++...
T Consensus 283 v~d~~---------~~~I~~~~~~g~ 299 (409)
T 3hrp_A 283 MSDQN---------LSSVYKITPDGE 299 (409)
T ss_dssp EEETT---------TTEEEEECTTCC
T ss_pred EEeCC---------CCEEEEEecCCC
Confidence 87532 356888887654
No 108
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=80.34 E-value=32 Score=30.73 Aligned_cols=70 Identities=11% Similarity=0.072 Sum_probs=44.1
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCc--EEEEecCCC---CC---CCcCceEEEECCEEEEEcCccCCCCcc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKK--WEKIVCKDT---PP---SRSGHRMIALKKHLVVFGGFHDNLREA 185 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~---p~---~~~~~~~~~~~~~iyv~GG~~~~~~~~ 185 (265)
++.||+.... +.++.+|..+++ |+.-..... +. .....+.++.++.||+...
T Consensus 77 ~g~vyv~~~~------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------- 136 (677)
T 1kb0_A 77 DGIMYVSASW------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------- 136 (677)
T ss_dssp TTEEEEECGG------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------
T ss_pred CCEEEEECCC------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------
Confidence 8999998652 458899988764 876432210 00 0112345566888888532
Q ss_pred ccCCceEEEEcCCC--ceEEec
Q psy14331 186 KYYNDVHIFDLETY--AWKKIE 205 (265)
Q Consensus 186 ~~~~~v~~y~~~~~--~W~~~~ 205 (265)
-..|+.+|..+. .|+.-.
T Consensus 137 --dg~l~alD~~tG~~~W~~~~ 156 (677)
T 1kb0_A 137 --DGRLIALDAATGKEVWHQNT 156 (677)
T ss_dssp --TSEEEEEETTTCCEEEEEET
T ss_pred --CCEEEEEECCCCCEEeeecC
Confidence 246999999875 487654
No 109
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=80.29 E-value=18 Score=27.97 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=47.2
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..||+.+.+-...-... .......... ++..++.|+.+ ..+
T Consensus 160 ~~~~l~~~~~d-----------~~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d---------~~i 216 (312)
T 4ery_A 160 DGSLIVSSSYD-----------GLCRIWDTASGQCLKTLIDD---DNPPVSFVKFSPNGKYILAATLD---------NTL 216 (312)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTCCEEEEECCS---SCCCEEEEEECTTSSEEEEEETT---------TEE
T ss_pred CCCEEEEEeCC-----------CcEEEEECCCCceeeEEecc---CCCceEEEEECCCCCEEEEEcCC---------CeE
Confidence 56666776642 45888998877643322111 1111122222 45566666542 458
Q ss_pred EEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 192 HIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 192 ~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..||..+.+-...-... ..............++.+++.|+.+.
T Consensus 217 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 217 KLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp EEEETTTTEEEEEECSS-CCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred EEEECCCCcEEEEEEec-CCceEEEEEEEEeCCCcEEEEECCCC
Confidence 88898876533222110 01111112222333566777777654
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=80.07 E-value=18 Score=29.36 Aligned_cols=73 Identities=11% Similarity=0.036 Sum_probs=36.9
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcE--EEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCC
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW--EKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYN 189 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W--~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 189 (265)
++.+++.|..... -..+..||..+..- .... .. ......+++.. ++.+++.|+.+ .
T Consensus 231 ~~~~l~~g~~~~~--------d~~i~iwd~~~~~~~~~~~~-~~--~~~~v~~~~~s~~~~~l~~~g~~d---------g 290 (402)
T 2aq5_A 231 EGKILTTGFSRMS--------ERQVALWDTKHLEEPLSLQE-LD--TSSGVLLPFFDPDTNIVYLCGKGD---------S 290 (402)
T ss_dssp TTEEEEEEECTTC--------CEEEEEEETTBCSSCSEEEE-CC--CCSSCEEEEEETTTTEEEEEETTC---------S
T ss_pred CCcEEEEeccCCC--------CceEEEEcCccccCCceEEe-cc--CCCceeEEEEcCCCCEEEEEEcCC---------C
Confidence 6777777631111 24688899876532 1111 11 11112222222 34666666543 3
Q ss_pred ceEEEEcCCCc--eEEecc
Q psy14331 190 DVHIFDLETYA--WKKIEP 206 (265)
Q Consensus 190 ~v~~y~~~~~~--W~~~~~ 206 (265)
.|..||+.+.+ ...+..
T Consensus 291 ~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 291 SIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp CEEEEEECSSTTCEEEEEE
T ss_pred eEEEEEecCCCcceEeecc
Confidence 57788887765 444444
No 111
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=79.58 E-value=21 Score=28.20 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=59.2
Q ss_pred eEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccc
Q psy14331 107 MVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAK 186 (265)
Q Consensus 107 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 186 (265)
.+.++..++.||+.... .+.+.+||+.+++....-... .....-.+++...+.+|...|...... .
T Consensus 200 gia~d~~~g~l~v~d~~-----------~~~I~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~pg~~~~~~g~~~v~~--~ 265 (329)
T 3fvz_A 200 SLALVPHLDQLCVADRE-----------NGRIQCFKTDTKEFVREIKHA-SFGRNVFAISYIPGFLFAVNGKPYFGD--Q 265 (329)
T ss_dssp EEEEETTTTEEEEEETT-----------TTEEEEEETTTCCEEEEECCT-TTTTCEEEEEEETTEEEEEECCCCTTC--S
T ss_pred EEEEECCCCEEEEEECC-----------CCEEEEEECCCCcEEEEEecc-ccCCCcceeeecCCEEEEeCCCEEecc--C
Confidence 34454444899998653 356999999867654432221 011111223333467777766532211 1
Q ss_pred cCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCc
Q psy14331 187 YYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGY 233 (265)
Q Consensus 187 ~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~ 233 (265)
....+..+|+.+.+....-... ......-.+++.-.++.|||....
T Consensus 266 ~~~~v~~~~~~~g~~~~~~~~~-~~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 266 EPVQGFVMNFSSGEIIDVFKPV-RKHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp CCCCEEEEETTTCCEEEEECCS-SSCCSSEEEEEECTTSEEEEEESS
T ss_pred CCcEEEEEEcCCCeEEEEEcCC-CCccCCeeEEEECCCCCEEEEECC
Confidence 2357889998887755442110 011112234455456789987543
No 112
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=79.49 E-value=11 Score=30.19 Aligned_cols=127 Identities=11% Similarity=0.139 Sum_probs=52.9
Q ss_pred CceEEEEe----eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCc-EEEEecCCCCC
Q psy14331 84 DHLILMNL----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKK-WEKIVCKDTPP 158 (265)
Q Consensus 84 ~~~~~yd~----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~p~ 158 (265)
..+..||+ +.....+......-.++.... ++.+++.|+.+ ..+..+|+.++. |....... .
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d-----------~~v~vwd~~~~~~~~~~~~~~--~ 98 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQD-----------RNAYVYEKRPDGTWKQTLVLL--R 98 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETT-----------SSEEEC------CCCCEEECC--C
T ss_pred CEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCC-----------CeEEEEEcCCCCceeeeeEec--c
Confidence 34556666 344444443322223333322 45666666642 347788887765 54443322 1
Q ss_pred CCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCc-eEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 159 SRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYA-WKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 159 ~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~-W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.......+.. ++..++.|+.+ ..+..||+.+.+ |..+..... +....-..+....++++++.|+.+
T Consensus 99 ~~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 99 LNRAATFVRWSPNEDKFAVGSGA---------RVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CSSCEEEEECCTTSSCCEEEESS---------SCEEECCC-----CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESS
T ss_pred cCCceEEEEECCCCCEEEEEecC---------CeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCC
Confidence 1111122222 45566666653 346777777654 433333211 122222333334456677776654
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=79.07 E-value=26 Score=28.99 Aligned_cols=65 Identities=9% Similarity=-0.054 Sum_probs=35.6
Q ss_pred CEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEE
Q psy14331 115 GQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIF 194 (265)
Q Consensus 115 ~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y 194 (265)
+.+++.|+.+ ..+.+||+.+.+....-.... .......+.. ++.+++.|+.+ ..|..|
T Consensus 210 ~~~l~s~~~d-----------~~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~s-d~~~l~s~~~d---------~~v~vw 267 (450)
T 2vdu_B 210 HQFIITSDRD-----------EHIKISHYPQCFIVDKWLFGH-KHFVSSICCG-KDYLLLSAGGD---------DKIFAW 267 (450)
T ss_dssp CEEEEEEETT-----------SCEEEEEESCTTCEEEECCCC-SSCEEEEEEC-STTEEEEEESS---------SEEEEE
T ss_pred CcEEEEEcCC-----------CcEEEEECCCCceeeeeecCC-CCceEEEEEC-CCCEEEEEeCC---------CeEEEE
Confidence 6777777742 357888887765433211111 1111112222 66666667642 457888
Q ss_pred EcCCCce
Q psy14331 195 DLETYAW 201 (265)
Q Consensus 195 ~~~~~~W 201 (265)
|+.+.+-
T Consensus 268 d~~~~~~ 274 (450)
T 2vdu_B 268 DWKTGKN 274 (450)
T ss_dssp ETTTCCE
T ss_pred ECCCCcE
Confidence 8887653
No 114
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=78.99 E-value=27 Score=29.92 Aligned_cols=87 Identities=11% Similarity=0.058 Sum_probs=40.8
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCC--cCceEEEE-C-CEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCC
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSR--SGHRMIAL-K-KHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGP 211 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~--~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p 211 (265)
..+..+|..+.+-.. ........ .-.+++.. + +..++.|+.+ ..+..||+.+.+-...-......
T Consensus 183 ~~v~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------g~i~vwd~~~~~~~~~~~~~~~~ 251 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSD---------RKISCFDGKSGEFLKYIEDDQEP 251 (615)
T ss_dssp TEEEEEETTTBEEEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETT---------CCEEEEETTTCCEEEECCBTTBC
T ss_pred CcEEEEeCCCcceee--eecccCCCCceEEEEEECCCCCCEEEEEeCC---------CeEEEEECCCCCEeEEecccccc
Confidence 457888877654332 22110110 11122222 4 6677777653 45888998876643332100001
Q ss_pred CCCCCceEEEeCCCeEEEEcCcc
Q psy14331 212 APRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 212 ~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
....-..+... ++..++.|+.+
T Consensus 252 ~~~~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 252 VQGGIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp CCSCEEEEEES-SSSEEEEEETT
T ss_pred cCCceEEEEEc-CCCEEEEEcCC
Confidence 11112233333 66677777654
No 115
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=78.66 E-value=21 Score=27.59 Aligned_cols=108 Identities=13% Similarity=0.127 Sum_probs=48.9
Q ss_pred HHHhhcccceEEEeccC--CCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe---eecC-CCCC-
Q psy14331 27 IEAEEKRKNKVIEKVVP--EPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL---FVSA-PGAP- 99 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~--~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~---w~~~-~~~p- 99 (265)
+..||+.+.++.....+ ......-+.+++.++++.+|+... .+.+++||+ .... ....
T Consensus 48 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---------------~~~l~~~d~~g~~~~~~~~~~~ 112 (314)
T 1pjx_A 48 ILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---------------RLGLLVVQTDGTFEEIAKKDSE 112 (314)
T ss_dssp EEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---------------TTEEEEEETTSCEEECCSBCTT
T ss_pred EEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---------------CCCEEEEeCCCCEEEEEeccCC
Confidence 66778777777542210 001122234444423278888754 235677776 2222 1111
Q ss_pred -CCccccceEEEecCCCEEEEEcCcccC----CCccccccCCceeEEEcCCCcEEEE
Q psy14331 100 -PPRCSHQMVALSADKGQLWMFGGEFSS----ASESQFHHYKDLWVFRMGEKKWEKI 151 (265)
Q Consensus 100 -~~r~~~~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~~~~~~~yd~~~~~W~~~ 151 (265)
.+......+.++ .++.||+....... ...........++++|+. ++...+
T Consensus 113 ~~~~~~~~~i~~d-~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 113 GRRMQGCNDCAFD-YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp SCBCBCCCEEEEC-TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CccccCCcCEEEC-CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 111112233333 25788886542210 000000113568899886 555544
No 116
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=78.62 E-value=20 Score=27.33 Aligned_cols=89 Identities=8% Similarity=-0.059 Sum_probs=47.9
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcC-ceEEEE-CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSG-HRMIAL-KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.||+.... .+.+.+||+ +++....... ..... .+++.. ++.+|+.... .+.|
T Consensus 193 ~g~l~v~~~~-----------~~~i~~~~~-~g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~---------~~~i 248 (299)
T 2z2n_A 193 DDALWFVEII-----------GNKIGRITT-SGEITEFKIP---TPNARPHAITAGAGIDLWFTEWG---------ANKI 248 (299)
T ss_dssp TSSEEEEETT-----------TTEEEEECT-TCCEEEEECS---STTCCEEEEEECSTTCEEEEETT---------TTEE
T ss_pred CCCEEEEccC-----------CceEEEECC-CCcEEEEECC---CCCCCceeEEECCCCCEEEeccC---------CceE
Confidence 4678887532 356889998 7776654322 11112 233332 5678876421 2568
Q ss_pred EEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 192 HIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 192 ~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
.+||+ +.+........ . ...-.+++. .++.||+..
T Consensus 249 ~~~d~-~g~~~~~~~~~--~-~~~~~~i~~-~~g~l~v~~ 283 (299)
T 2z2n_A 249 GRLTS-NNIIEEYPIQI--K-SAEPHGICF-DGETIWFAM 283 (299)
T ss_dssp EEEET-TTEEEEEECSS--S-SCCEEEEEE-CSSCEEEEE
T ss_pred EEECC-CCceEEEeCCC--C-CCccceEEe-cCCCEEEEe
Confidence 89998 45555443211 1 111234444 678888874
No 117
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=78.60 E-value=37 Score=30.41 Aligned_cols=71 Identities=14% Similarity=0.173 Sum_probs=43.5
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCC--cEEEEecCCC---CC---CCcCceEEEECCEEEEEcCccCCCCcc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK--KWEKIVCKDT---PP---SRSGHRMIALKKHLVVFGGFHDNLREA 185 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~---p~---~~~~~~~~~~~~~iyv~GG~~~~~~~~ 185 (265)
++.||+.+. ...++.+|..++ .|+.-..... +. .....+.++.++.||+-..
T Consensus 70 ~g~vyv~~~------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------- 129 (689)
T 1yiq_A 70 DGVMYTTGP------------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------- 129 (689)
T ss_dssp TTEEEEECG------------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------
T ss_pred CCEEEEEcC------------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------
Confidence 899999865 245889998876 4875432210 00 0111234566888887542
Q ss_pred ccCCceEEEEcCCC--ceEEecc
Q psy14331 186 KYYNDVHIFDLETY--AWKKIEP 206 (265)
Q Consensus 186 ~~~~~v~~y~~~~~--~W~~~~~ 206 (265)
-..|+.+|..+. .|+.-..
T Consensus 130 --dg~l~AlDa~TG~~~W~~~~~ 150 (689)
T 1yiq_A 130 --DGRLEAIDAKTGQRAWSVDTR 150 (689)
T ss_dssp --TSEEEEEETTTCCEEEEEECC
T ss_pred --CCEEEEEECCCCCEeeeecCc
Confidence 246899999875 4876543
No 118
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=78.08 E-value=25 Score=28.25 Aligned_cols=42 Identities=7% Similarity=0.035 Sum_probs=20.3
Q ss_pred CceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 189 NDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 189 ~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
..+..||+.+.+-...-. .....-..+....++++++.|+.+
T Consensus 227 g~i~~~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLI----GHHGPISVLEFNDTNKLLLSASDD 268 (425)
T ss_dssp GCEEEEETTCSSCSEEEC----CCSSCEEEEEEETTTTEEEEEETT
T ss_pred CeEEEEEcCCCceeeeec----cCCCceEEEEECCCCCEEEEEcCC
Confidence 458889988754322211 111111233334456666666644
No 119
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=77.44 E-value=21 Score=26.99 Aligned_cols=54 Identities=15% Similarity=0.117 Sum_probs=30.7
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEec-cCC-CCCC------CCCCceEEEe-CCCeEEEEcCc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIE-PLG-AGPA------PRSGCQMAAT-PDGKILISGGY 233 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~-~~~-~~p~------~~~~~~~~~~-~~~~iyi~GG~ 233 (265)
++++|+|-| +..|+||..+++...-+ .+. ..|. +..-.++... .++++|++-|.
T Consensus 127 ~gk~yfFkG-----------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~ 189 (225)
T 3oyo_A 127 GKEVYLFKG-----------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ 189 (225)
T ss_dssp TTEEEEEET-----------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT
T ss_pred CCcEEEEeC-----------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC
Confidence 689999987 46789987766544310 000 0221 2222333443 47899998664
No 120
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=77.23 E-value=22 Score=27.09 Aligned_cols=68 Identities=7% Similarity=-0.042 Sum_probs=37.6
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.||+.... ...+.++|+. ++........ ....-..++.. ++.+|+.... ...|+
T Consensus 114 ~g~l~v~~~~-----------~~~i~~~~~~-g~~~~~~~~~--~~~~~~~i~~d~~g~l~v~~~~---------~~~i~ 170 (300)
T 2qc5_A 114 NGDIWFTQLN-----------GDRIGKLTAD-GTIYEYDLPN--KGSYPAFITLGSDNALWFTENQ---------NNSIG 170 (300)
T ss_dssp TTCEEEEETT-----------TTEEEEECTT-SCEEEEECSS--TTCCEEEEEECTTSSEEEEETT---------TTEEE
T ss_pred CCCEEEEccC-----------CCeEEEECCC-CCEEEccCCC--CCCCceeEEECCCCCEEEEecC---------CCeEE
Confidence 6788887432 2458889887 6655443211 11122233332 4567775421 24688
Q ss_pred EEEcCCCceEEec
Q psy14331 193 IFDLETYAWKKIE 205 (265)
Q Consensus 193 ~y~~~~~~W~~~~ 205 (265)
+||+ +.+...+.
T Consensus 171 ~~~~-~g~~~~~~ 182 (300)
T 2qc5_A 171 RITN-TGKLEEYP 182 (300)
T ss_dssp EECT-TCCEEEEE
T ss_pred EECC-CCcEEEee
Confidence 8988 66666544
No 121
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=76.97 E-value=24 Score=27.51 Aligned_cols=68 Identities=13% Similarity=0.086 Sum_probs=40.3
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-C-CEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-K-KHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+|+.++. .+.+.++|+.+++....-... .....+.++.. + +.+|+.+.. ...|
T Consensus 10 ~~~~~v~~~~-----------~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~~~v~~~~---------~~~i 67 (349)
T 1jmx_B 10 GHEYMIVTNY-----------PNNLHVVDVASDTVYKSCVMP--DKFGPGTAMMAPDNRTAYVLNNH---------YGDI 67 (349)
T ss_dssp TCEEEEEEET-----------TTEEEEEETTTTEEEEEEECS--SCCSSCEEEECTTSSEEEEEETT---------TTEE
T ss_pred CCEEEEEeCC-----------CCeEEEEECCCCcEEEEEecC--CCCCCceeEECCCCCEEEEEeCC---------CCcE
Confidence 6778887764 356899999888654332221 21112233333 3 467776532 2568
Q ss_pred EEEEcCCCceEE
Q psy14331 192 HIFDLETYAWKK 203 (265)
Q Consensus 192 ~~y~~~~~~W~~ 203 (265)
+.+|+.+.+-..
T Consensus 68 ~~~d~~t~~~~~ 79 (349)
T 1jmx_B 68 YGIDLDTCKNTF 79 (349)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEeCCCCcEEE
Confidence 999998876543
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=76.95 E-value=30 Score=28.59 Aligned_cols=52 Identities=8% Similarity=0.049 Sum_probs=28.2
Q ss_pred CEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 170 KHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 170 ~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
+.+++.|+.+ ..|..||+.+.+-...-.. .....-..++.. ++++++.|+.+
T Consensus 210 ~~~l~s~~~d---------~~i~vwd~~~~~~~~~~~~---~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 210 HQFIITSDRD---------EHIKISHYPQCFIVDKWLF---GHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp CEEEEEEETT---------SCEEEEEESCTTCEEEECC---CCSSCEEEEEEC-STTEEEEEESS
T ss_pred CcEEEEEcCC---------CcEEEEECCCCceeeeeec---CCCCceEEEEEC-CCCEEEEEeCC
Confidence 7777777753 3588888887654332111 111111233333 67777777654
No 123
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=76.89 E-value=28 Score=28.16 Aligned_cols=122 Identities=9% Similarity=0.059 Sum_probs=58.6
Q ss_pred CceEEEEe--eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCc
Q psy14331 84 DHLILMNL--FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRS 161 (265)
Q Consensus 84 ~~~~~yd~--w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~ 161 (265)
..+..||. ......+..... ...... ..++.+++.|+.+ ..+..+|+.+++-... ... ....
T Consensus 78 ~~v~i~d~~~~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~--~~~-h~~~ 141 (420)
T 3vl1_A 78 GHDFLFNTIIRDGSKMLKRADY-TAVDTA-KLQMRRFILGTTE-----------GDIKVLDSNFNLQREI--DQA-HVSE 141 (420)
T ss_dssp TEEEEEECCSEETTTTSCSCCE-EEEEEE-CSSSCEEEEEETT-----------SCEEEECTTSCEEEEE--TTS-SSSC
T ss_pred CcEEEEEecccceeeEEecCCc-eEEEEE-ecCCCEEEEEECC-----------CCEEEEeCCCcceeee--ccc-ccCc
Confidence 46777777 333222222211 122222 2366777777642 4588888877654332 210 1111
Q ss_pred CceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCce-EEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 162 GHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAW-KKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 162 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W-~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
-.+++.. ++.+++.|+.+ ..|..||+.+.+- ..+.. ....-..+....++..++.|+.+.
T Consensus 142 v~~~~~~~~~~~l~s~s~d---------~~i~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 142 ITKLKFFPSGEALISSSQD---------MQLKIWSVKDGSNPRTLIG-----HRATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp EEEEEECTTSSEEEEEETT---------SEEEEEETTTCCCCEEEEC-----CSSCEEEEEEETTTTEEEEEETTS
T ss_pred cEEEEECCCCCEEEEEeCC---------CeEEEEeCCCCcCceEEcC-----CCCcEEEEEEcCCCCEEEEEcCCC
Confidence 1122222 45566666643 3588888876542 22221 111123334444666777776654
No 124
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=76.78 E-value=38 Score=29.63 Aligned_cols=61 Identities=15% Similarity=0.087 Sum_probs=35.6
Q ss_pred CceeEEEcC-CC---cEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 136 KDLWVFRMG-EK---KWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 136 ~~~~~yd~~-~~---~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
.+++.+|.. ++ +...+... ........... ++++|+.+..++ ...|+.+|+.+.+++.+..
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~---~~~~~~~~~~spdg~l~~~~~~~~-------~~~l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGG---PEEAIAQAEWAPDGSLIVATDRTG-------WWNLHRVDPATGAATQLCR 282 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEE---TTBCEEEEEECTTSCEEEEECTTS-------SCEEEEECTTTCCEEESSC
T ss_pred cEEEEEEECCCCcccccEEeCCC---CCceEcceEECCCCeEEEEECCCC-------CeEEEEEECCCCceeeccc
Confidence 579999998 56 34444321 01111122222 566776665432 2479999998888887765
No 125
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=76.39 E-value=27 Score=27.65 Aligned_cols=84 Identities=8% Similarity=0.088 Sum_probs=41.6
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCC
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPR 214 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~ 214 (265)
..+..+|+.+++-... ... ....-.+++.. ++.+++.|+.+ ..+..+|+.+..-...-. ....
T Consensus 164 ~~i~~wd~~~~~~~~~--~~~-h~~~v~~~~~~~~~~~l~sg~~d---------~~v~~wd~~~~~~~~~~~----~h~~ 227 (340)
T 1got_B 164 TTCALWDIETGQQTTT--FTG-HTGDVMSLSLAPDTRLFVSGACD---------ASAKLWDVREGMCRQTFT----GHES 227 (340)
T ss_dssp SCEEEEETTTTEEEEE--ECC-CSSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTCSEEEEEC----CCSS
T ss_pred CcEEEEECCCCcEEEE--EcC-CCCceEEEEECCCCCEEEEEeCC---------CcEEEEECCCCeeEEEEc----CCcC
Confidence 4578899888754322 110 11111122222 55677777754 357788887754322211 1111
Q ss_pred CCceEEEeCCCeEEEEcCccc
Q psy14331 215 SGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 215 ~~~~~~~~~~~~iyi~GG~~~ 235 (265)
.-.+++...++.+++.|+.+.
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEEcCCCCEEEEEcCCC
Confidence 123334444667777777654
No 126
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=76.25 E-value=30 Score=30.77 Aligned_cols=16 Identities=19% Similarity=0.609 Sum_probs=12.4
Q ss_pred ceeEEEcCCCcEEEEe
Q psy14331 137 DLWVFRMGEKKWEKIV 152 (265)
Q Consensus 137 ~~~~yd~~~~~W~~~~ 152 (265)
+++.+|+.+++...+.
T Consensus 173 ~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLT 188 (741)
T ss_dssp EEEEEETTTTEEEECC
T ss_pred cEEEEecCCCCEEEec
Confidence 5899999888766654
No 127
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=75.98 E-value=43 Score=29.83 Aligned_cols=70 Identities=9% Similarity=0.046 Sum_probs=42.9
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCC--cEEEEecCCCC------CCCcCceEEEECCEEEEEcCccCCCCcc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK--KWEKIVCKDTP------PSRSGHRMIALKKHLVVFGGFHDNLREA 185 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~p------~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 185 (265)
++.||+... ...++.+|..++ .|+.-...... ......+.++.+++||+...
T Consensus 66 ~g~vyv~~~------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------- 125 (668)
T 1kv9_A 66 DGVIYTSMS------------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------- 125 (668)
T ss_dssp TTEEEEEEG------------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------
T ss_pred CCEEEEECC------------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------
Confidence 899999865 245889998776 48764322100 00011234556888887532
Q ss_pred ccCCceEEEEcCCC--ceEEec
Q psy14331 186 KYYNDVHIFDLETY--AWKKIE 205 (265)
Q Consensus 186 ~~~~~v~~y~~~~~--~W~~~~ 205 (265)
-..|+.+|..+. .|+.-.
T Consensus 126 --dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 126 --DGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp --TSEEEEEETTTCCEEEEEEC
T ss_pred --CCEEEEEECCCCCEeeeecc
Confidence 246999999875 488654
No 128
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=75.22 E-value=25 Score=26.79 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=48.5
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCce
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
.++.||+.+... ...+.+||.....-..+... ....-..++.. ++.+|+.... .+.|
T Consensus 87 ~~g~l~v~~~~~----------~~~i~~~d~~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~---------~~~i 144 (286)
T 1q7f_A 87 NSGDIIVTERSP----------THQIQIYNQYGQFVRKFGAT---ILQHPRGVTVDNKGRIIVVECK---------VMRV 144 (286)
T ss_dssp TTTEEEEEECGG----------GCEEEEECTTSCEEEEECTT---TCSCEEEEEECTTSCEEEEETT---------TTEE
T ss_pred CCCeEEEEcCCC----------CCEEEEECCCCcEEEEecCc---cCCCceEEEEeCCCCEEEEECC---------CCEE
Confidence 478899886421 24588898544433333211 11112233333 5678886532 2468
Q ss_pred EEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcC
Q psy14331 192 HIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGG 232 (265)
Q Consensus 192 ~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG 232 (265)
.+||+.......+...... ..-..++.-.++.+|+...
T Consensus 145 ~~~~~~g~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 145 IIFDQNGNVLHKFGCSKHL---EFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EEECTTSCEEEEEECTTTC---SSEEEEEECSSSEEEEEEG
T ss_pred EEEcCCCCEEEEeCCCCcc---CCcEEEEECCCCCEEEEEC
Confidence 8899776555444331111 1113344444567887653
No 129
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=75.06 E-value=30 Score=27.64 Aligned_cols=71 Identities=6% Similarity=-0.077 Sum_probs=37.6
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.+++.|+.+ ..+..+|+.+.....+..... ....-.+++.. ++.+++.|+.+ ..|.
T Consensus 130 ~~~~l~s~~~d-----------~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---------~~i~ 188 (383)
T 3ei3_B 130 NTNQLFVSSIR-----------GATTLRDFSGSVIQVFAKTDS-WDYWYCCVDVSVSRQMLATGDST---------GRLL 188 (383)
T ss_dssp EEEEEEEEETT-----------TEEEEEETTSCEEEEEECCCC-SSCCEEEEEEETTTTEEEEEETT---------SEEE
T ss_pred CCCEEEEEeCC-----------CEEEEEECCCCceEEEeccCC-CCCCeEEEEECCCCCEEEEECCC---------CCEE
Confidence 34666666542 457889988776666543321 11111122222 55666666643 4577
Q ss_pred EEEcCCCceEEec
Q psy14331 193 IFDLETYAWKKIE 205 (265)
Q Consensus 193 ~y~~~~~~W~~~~ 205 (265)
.||+....-..+.
T Consensus 189 i~d~~~~~~~~~~ 201 (383)
T 3ei3_B 189 LLGLDGHEIFKEK 201 (383)
T ss_dssp EEETTSCEEEEEE
T ss_pred EEECCCCEEEEec
Confidence 8887554444443
No 130
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=74.13 E-value=23 Score=27.43 Aligned_cols=65 Identities=9% Similarity=0.132 Sum_probs=34.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..+|..+.+-.. ... .....-..+.. ++.+++.|+.++ .|
T Consensus 197 ~~~~l~s~s~D-----------~~i~iWd~~~~~~~~--~~~--~h~~~v~~~~~~p~~~~l~s~s~Dg---------~i 252 (304)
T 2ynn_A 197 DKPYMITASDD-----------LTIKIWDYQTKSCVA--TLE--GHMSNVSFAVFHPTLPIIISGSEDG---------TL 252 (304)
T ss_dssp TCCEEEEEETT-----------SEEEEEETTTTEEEE--EEE--CCSSCEEEEEECSSSSEEEEEETTS---------CE
T ss_pred CCCEEEEEcCC-----------CeEEEEeCCCCccce--eeC--CCCCCEEEEEECCCCCEEEEEcCCC---------eE
Confidence 44566666642 457788887765322 111 01111122222 456677776543 47
Q ss_pred EEEEcCCCceE
Q psy14331 192 HIFDLETYAWK 202 (265)
Q Consensus 192 ~~y~~~~~~W~ 202 (265)
..+|+.+.+-.
T Consensus 253 ~iWd~~~~~~~ 263 (304)
T 2ynn_A 253 KIWNSSTYKVE 263 (304)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcee
Confidence 78888776543
No 131
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=74.13 E-value=21 Score=26.91 Aligned_cols=20 Identities=20% Similarity=0.636 Sum_probs=15.1
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCC
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGE 145 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~ 145 (265)
.++++|++-| +..|+||..+
T Consensus 125 ~~gk~yfFkG-------------~~ywr~d~~~ 144 (219)
T 1hxn_A 125 GSSRLHIMAG-------------RRLWWLDLKS 144 (219)
T ss_dssp TCCEEEEEET-------------TEEEEEEGGG
T ss_pred CCCEEEEEeC-------------CEEEEEeCCC
Confidence 3689999987 3478998654
No 132
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=74.02 E-value=9 Score=30.86 Aligned_cols=107 Identities=18% Similarity=0.069 Sum_probs=51.0
Q ss_pred eEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCcc
Q psy14331 53 FLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASES 130 (265)
Q Consensus 53 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 130 (265)
+++.|.++.+++.|+. -..+..||+ ......+........++.+...++++++.|+.+
T Consensus 232 v~~sp~~~~~la~g~~--------------d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D------ 291 (357)
T 4g56_B 232 VTWHPEKDDTFACGDE--------------TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED------ 291 (357)
T ss_dssp EEECTTSTTEEEEEES--------------SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT------
T ss_pred hhhhhcccceEEEeec--------------ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC------
Confidence 3444556777777762 245667777 111111111111222333333344666666642
Q ss_pred ccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE---CCEEEEEcCccCCCCccccCCceEEEEcCC
Q psy14331 131 QFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL---KKHLVVFGGFHDNLREAKYYNDVHIFDLET 198 (265)
Q Consensus 131 ~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~ 198 (265)
..+..+|..+++-... .. . ...-..+.. ++.+++-||.++ .|..+|+.+
T Consensus 292 -----~~i~iwd~~~~~~~~~--~~--H-~~~V~~vafsP~d~~~l~s~s~Dg---------~v~iW~~~~ 343 (357)
T 4g56_B 292 -----CTVAVLDADFSEVFRD--LS--H-RDFVTGVAWSPLDHSKFTTVGWDH---------KVLHHHLPS 343 (357)
T ss_dssp -----SCEEEECTTSCEEEEE--CC--C-SSCEEEEEECSSSTTEEEEEETTS---------CEEEEECC-
T ss_pred -----CEEEEEECCCCcEeEE--CC--C-CCCEEEEEEeCCCCCEEEEEcCCC---------eEEEEECCC
Confidence 3477889887754332 21 1 111122222 456777777643 366676543
No 133
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=73.29 E-value=51 Score=29.51 Aligned_cols=54 Identities=7% Similarity=0.060 Sum_probs=26.8
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCc
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYA 200 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~ 200 (265)
..+..+|..++ |........ ....-.+++.. ++..++.|+.+ ..|..||+.+..
T Consensus 119 g~i~vw~~~~~-~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d---------g~v~vwd~~~~~ 174 (814)
T 3mkq_A 119 LTVKLWNWENN-WALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLD---------RTVKVWSLGQST 174 (814)
T ss_dssp SEEEEEEGGGT-SEEEEEEEC-CSSCEEEEEEETTEEEEEEEEETT---------SEEEEEETTCSS
T ss_pred CEEEEEECCCC-ceEEEEEcC-CCCcEEEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCc
Confidence 45778888765 222221110 11111122222 34677777653 357888886644
No 134
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=73.20 E-value=34 Score=27.37 Aligned_cols=65 Identities=12% Similarity=0.124 Sum_probs=32.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE---CCEEEEEcCccCCCCccccCCc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL---KKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
++.+++.|+.+ ..+..+|+.+.+-....... ........+.. ++.+++.|+.+ ..
T Consensus 193 ~~~~~~s~~~d-----------g~v~~wd~~~~~~~~~~~~~--~~~~~v~~v~~sp~~~~~la~g~~d---------~~ 250 (357)
T 4g56_B 193 KDTIFLSCGED-----------GRILLWDTRKPKPATRIDFC--ASDTIPTSVTWHPEKDDTFACGDET---------GN 250 (357)
T ss_dssp CSSCEEEEETT-----------SCEEECCTTSSSCBCBCCCT--TCCSCEEEEEECTTSTTEEEEEESS---------SC
T ss_pred CCceeeeeccC-----------CceEEEECCCCceeeeeeec--cccccccchhhhhcccceEEEeecc---------cc
Confidence 34566666642 34677787766432211111 11111122222 35677777653 34
Q ss_pred eEEEEcCCCc
Q psy14331 191 VHIFDLETYA 200 (265)
Q Consensus 191 v~~y~~~~~~ 200 (265)
|..||+.+.+
T Consensus 251 i~~wd~~~~~ 260 (357)
T 4g56_B 251 VSLVNIKNPD 260 (357)
T ss_dssp EEEEESSCGG
T ss_pred eeEEECCCCc
Confidence 7788887643
No 135
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=72.87 E-value=38 Score=27.84 Aligned_cols=99 Identities=9% Similarity=0.111 Sum_probs=52.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEE--ECCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIA--LKKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..+|..+..-..+..... ....-.+++. .++.+++.|+.++ .|
T Consensus 131 ~~~~lasGs~d-----------g~i~lWd~~~~~~~~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s~D~---------~v 189 (435)
T 4e54_B 131 HPSTVAVGSKG-----------GDIMLWNFGIKDKPTFIKGIG-AGGSITGLKFNPLNTNQFYASSMEG---------TT 189 (435)
T ss_dssp CTTCEEEEETT-----------SCEEEECSSCCSCCEEECCCS-SSCCCCEEEECSSCTTEEEEECSSS---------CE
T ss_pred CCCEEEEEeCC-----------CEEEEEECCCCCceeEEEccC-CCCCEEEEEEeCCCCCEEEEEeCCC---------EE
Confidence 55677777753 357888887765433322210 1111112222 2455666666543 47
Q ss_pred EEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 192 HIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 192 ~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..+|+.++....+.... .......++....++++++.|+.+.
T Consensus 190 ~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 190 RLQDFKGNILRVFASSD--TINIWFCSLDVSASSRMVVTGDNVG 231 (435)
T ss_dssp EEEETTSCEEEEEECCS--SCSCCCCCEEEETTTTEEEEECSSS
T ss_pred EEeeccCCceeEEeccC--CCCccEEEEEECCCCCEEEEEeCCC
Confidence 78898887666554431 1112223344444677777777653
No 136
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=72.63 E-value=29 Score=26.35 Aligned_cols=91 Identities=4% Similarity=-0.001 Sum_probs=48.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.||+.... ...+.+||+. ++........ ....-+.++.. ++.+|+.... ...|+
T Consensus 72 ~g~l~v~~~~-----------~~~v~~~d~~-g~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~---------~~~i~ 128 (300)
T 2qc5_A 72 LGDIWFTENG-----------ANKIGKLSKK-GGFTEYPLPQ--PDSGPYGITEGLNGDIWFTQLN---------GDRIG 128 (300)
T ss_dssp TSCEEEEETT-----------TTEEEEECTT-SCEEEEECSS--TTCCEEEEEECSTTCEEEEETT---------TTEEE
T ss_pred CCCEEEEecC-----------CCeEEEECCC-CCeEEecCCC--CCCCCccceECCCCCEEEEccC---------CCeEE
Confidence 5778886432 2458899988 6666554221 11222233333 5678876432 24688
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
++|+. .+....... .....-..++.-.++++|+..
T Consensus 129 ~~~~~-g~~~~~~~~---~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 129 KLTAD-GTIYEYDLP---NKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp EECTT-SCEEEEECS---STTCCEEEEEECTTSSEEEEE
T ss_pred EECCC-CCEEEccCC---CCCCCceeEEECCCCCEEEEe
Confidence 89887 665544321 011122333333456677754
No 137
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=71.72 E-value=37 Score=27.20 Aligned_cols=93 Identities=11% Similarity=0.064 Sum_probs=44.7
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.+++.|+.+ ..+..||..+.+-...-.. ....-.+++.. ++ +++.++.+ ..+.
T Consensus 258 ~~~~l~~~~~d-----------~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~-~l~~~~~d---------~~i~ 313 (425)
T 1r5m_A 258 TNKLLLSASDD-----------GTLRIWHGGNGNSQNCFYG---HSQSIVSASWVGDD-KVISCSMD---------GSVR 313 (425)
T ss_dssp TTTEEEEEETT-----------SCEEEECSSSBSCSEEECC---CSSCEEEEEEETTT-EEEEEETT---------SEEE
T ss_pred CCCEEEEEcCC-----------CEEEEEECCCCccceEecC---CCccEEEEEECCCC-EEEEEeCC---------CcEE
Confidence 45566666532 4477888776542222111 11111233333 44 55666542 4688
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.||+.+.+-...-.. ....-..+....++.+++.|+.+
T Consensus 314 i~d~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 314 LWSLKQNTLLALSIV----DGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp EEETTTTEEEEEEEC----TTCCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEeEeccc----CCccEEEEEEcCCCCEEEEEECC
Confidence 899877653322221 11112233334456677776654
No 138
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=71.51 E-value=46 Score=28.15 Aligned_cols=52 Identities=13% Similarity=0.049 Sum_probs=29.6
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCceE-----Eec-cCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWK-----KIE-PLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~-----~~~-~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
++++|+|-| +..|+||..+.+-. .+. .-+..|. .. -+++. .++++|.|-|..
T Consensus 367 ~~k~yfFkG-----------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~-~i-DAA~~-~~g~~YFFkg~~ 424 (450)
T 1su3_A 367 TGKTYFFVA-----------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH-KV-DAVFM-KDGFFYFFHGTR 424 (450)
T ss_dssp TTEEEEEET-----------TEEEEEETTTTEECSSCSEEHHHHSTTSCS-CC-SEEEE-ETTEEEEEETTE
T ss_pred CCeEEEEeC-----------CEEEEEeCCCccccCCCCcchhhcCCCCCC-Cc-cEEEE-cCCeEEEEeCCE
Confidence 589999977 46899997654322 121 1111222 22 33333 378999986653
No 139
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=71.38 E-value=38 Score=27.19 Aligned_cols=105 Identities=5% Similarity=-0.056 Sum_probs=50.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++++++.++. +.+.+++..++.-................+..-++..++.++.+... ...++.
T Consensus 187 dg~~l~s~s~------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-----~~~i~~ 249 (365)
T 4h5i_A 187 DGKVVAYITG------------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK-----GIVLTK 249 (365)
T ss_dssp TSSEEEEECS------------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC-----CEEEEE
T ss_pred CCceEEeccc------------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc-----eeEEee
Confidence 5666666552 34667777777654433221111111112223377777777654432 124666
Q ss_pred EEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 194 FDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 194 y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
++....................-.+++.-.++++++.|+.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 776665554332110001111112334445677888877654
No 140
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=70.47 E-value=41 Score=27.20 Aligned_cols=66 Identities=12% Similarity=0.010 Sum_probs=33.3
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.+++.|+.+ ..+..+|+....-....... ....-.++... ++.+++.|+.+ ..|.
T Consensus 185 ~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d---------~~v~ 242 (401)
T 4aez_A 185 NRHVLSSGSRS-----------GAIHHHDVRIANHQIGTLQG--HSSEVCGLAWRSDGLQLASGGND---------NVVQ 242 (401)
T ss_dssp ETTEEEEEETT-----------SEEEEEETTSSSCEEEEEEC--CSSCEEEEEECTTSSEEEEEETT---------SCEE
T ss_pred CCCEEEEEcCC-----------CCEEEEecccCcceeeEEcC--CCCCeeEEEEcCCCCEEEEEeCC---------CeEE
Confidence 45566666642 45788888743321111111 11111122222 55677777653 3588
Q ss_pred EEEcCCCce
Q psy14331 193 IFDLETYAW 201 (265)
Q Consensus 193 ~y~~~~~~W 201 (265)
.||+.+..-
T Consensus 243 iwd~~~~~~ 251 (401)
T 4aez_A 243 IWDARSSIP 251 (401)
T ss_dssp EEETTCSSE
T ss_pred EccCCCCCc
Confidence 899887543
No 141
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=70.15 E-value=40 Score=26.91 Aligned_cols=65 Identities=14% Similarity=0.153 Sum_probs=32.5
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE---CCEEEEEcCccCCCCccccCCc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL---KKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
+..+++.|+.+ ..+..+|+.+.+-...-... ........+.. ++.+++.|+.+ ..
T Consensus 181 ~~~~l~s~s~D-----------~~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~l~sg~~d---------g~ 238 (344)
T 4gqb_B 181 KDSVFLSCSED-----------NRILLWDTRCPKPASQIGCS--APGYLPTSLAWHPQQSEVFVFGDEN---------GT 238 (344)
T ss_dssp CTTEEEEEETT-----------SCEEEEETTSSSCEEECC------CCCEEEEEECSSCTTEEEEEETT---------SE
T ss_pred CCCceeeeccc-----------cccccccccccceeeeeecc--eeeccceeeeecCCCCcceEEeccC---------Cc
Confidence 44577777643 34778898876543321111 11111122222 45677777653 34
Q ss_pred eEEEEcCCCc
Q psy14331 191 VHIFDLETYA 200 (265)
Q Consensus 191 v~~y~~~~~~ 200 (265)
|..||+.+.+
T Consensus 239 v~~wd~~~~~ 248 (344)
T 4gqb_B 239 VSLVDTKSTS 248 (344)
T ss_dssp EEEEESCC--
T ss_pred EEEEECCCCc
Confidence 7778877643
No 142
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=68.89 E-value=56 Score=29.00 Aligned_cols=53 Identities=15% Similarity=0.143 Sum_probs=29.1
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCceE-----EeccC-CCCCCCCCCceEEEeC-CCeEEEEcCcc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWK-----KIEPL-GAGPAPRSGCQMAATP-DGKILISGGYS 234 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~-----~~~~~-~~~p~~~~~~~~~~~~-~~~iyi~GG~~ 234 (265)
++++|+|-| +..|+||..+++-. .+... ...|. .-.++.... ++++|++-|..
T Consensus 548 ~gktYFFkG-----------~~ywryd~~~~~vd~gYPk~i~~~w~G~p~--~iDAAf~~~~~g~~YFFkG~~ 607 (631)
T 1ck7_A 548 NKKTYIFAG-----------DKFWRYNEVKKKMDPGFPKLIADAWNAIPD--NLDAVVDLQGGGHSYFFKGAY 607 (631)
T ss_dssp TCEEEEEET-----------TEEEEEETTTTEECTTCCEETTTSCSSCCT--TCCEEECCTTSCBCEEEETTE
T ss_pred CCeEEEEEC-----------CEEEEEcCCcccccCCCCcchHhhcCCCCC--CCcEeEEEcCCCeEEEEECCE
Confidence 679999977 46889997665321 11111 01121 123333332 47899987754
No 143
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=68.61 E-value=39 Score=26.14 Aligned_cols=69 Identities=6% Similarity=-0.050 Sum_probs=42.4
Q ss_pred cCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCc
Q psy14331 112 ADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 112 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
..++.||++.-. ...+++||+.++.-...... .. -.+++.. ++.+++.. .+.
T Consensus 22 ~~~~~l~~~d~~-----------~~~i~~~d~~~~~~~~~~~~----~~-~~~i~~~~dG~l~v~~-----------~~~ 74 (297)
T 3g4e_A 22 EVSNSLLFVDIP-----------AKKVCRWDSFTKQVQRVTMD----AP-VSSVALRQSGGYVATI-----------GTK 74 (297)
T ss_dssp TTTTEEEEEETT-----------TTEEEEEETTTCCEEEEECS----SC-EEEEEEBTTSSEEEEE-----------TTE
T ss_pred CCCCEEEEEECC-----------CCEEEEEECCCCcEEEEeCC----Cc-eEEEEECCCCCEEEEE-----------CCe
Confidence 335788887543 35689999998876544321 11 1123332 55666542 146
Q ss_pred eEEEEcCCCceEEeccC
Q psy14331 191 VHIFDLETYAWKKIEPL 207 (265)
Q Consensus 191 v~~y~~~~~~W~~~~~~ 207 (265)
|++||+.+.+++.+...
T Consensus 75 l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCcEEEEEec
Confidence 88999999888877653
No 144
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=68.18 E-value=60 Score=28.23 Aligned_cols=70 Identities=9% Similarity=0.145 Sum_probs=43.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEc-CCC--cEEEEecCCCC-C--C---CcCceEEEECCEEEEEcCccCCCCc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRM-GEK--KWEKIVCKDTP-P--S---RSGHRMIALKKHLVVFGGFHDNLRE 184 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~p-~--~---~~~~~~~~~~~~iyv~GG~~~~~~~ 184 (265)
++.||+.... ...++.+|. .++ .|+.-...... . . ....+.++.++++|+...
T Consensus 62 ~g~vyv~~~~-----------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 62 GDMMYVHSAF-----------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp TTEEEEECST-----------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred CCEEEEEeCC-----------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------
Confidence 8999998652 145899998 776 48764322100 0 0 111234566888888643
Q ss_pred cccCCceEEEEcCCC--ceEEe
Q psy14331 185 AKYYNDVHIFDLETY--AWKKI 204 (265)
Q Consensus 185 ~~~~~~v~~y~~~~~--~W~~~ 204 (265)
...|+++|..+. .|+.-
T Consensus 124 ---dg~l~alD~~tG~~~W~~~ 142 (571)
T 2ad6_A 124 ---NGHLLALDAKTGKINWEVE 142 (571)
T ss_dssp ---TSEEEEEETTTCCEEEEEE
T ss_pred ---CCEEEEEECCCCCEEEEec
Confidence 246899999875 58754
No 145
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=68.03 E-value=18 Score=29.65 Aligned_cols=39 Identities=5% Similarity=0.027 Sum_probs=19.2
Q ss_pred HHHhhcccceEEEeccCCCCCCCc-eeeEEecCCCEEEEECc
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRRAN-FSFLAHPDKDQLILFGG 67 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r~~-~~~~~~~~~~~lyv~GG 67 (265)
++.+|..+.+... .......... .++++. .++.+++.|+
T Consensus 127 V~lWd~~tg~~~~-~~~~~~~~~~V~sv~fs-pdg~~lasgs 166 (420)
T 4gga_A 127 VYLWSASSGDILQ-LLQMEQPGEYISSVAWI-KEGNYLAVGT 166 (420)
T ss_dssp EEEEETTTCCEEE-EEECCSTTCCEEEEEEC-TTSSEEEEEE
T ss_pred EEEEECCCCCEEE-EEEecCCCCcEEEEEEC-CCCCEEEEEE
Confidence 5667777776654 2222222222 233444 3455566666
No 146
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=66.99 E-value=41 Score=25.82 Aligned_cols=86 Identities=10% Similarity=0.037 Sum_probs=45.7
Q ss_pred CceeEEEcCCCcEEEEecCCC-CCCCcCceEEEE-C-CEEEEEcCccCCCCccccCCceEEEEcCCCceEEe-ccCCCCC
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDT-PPSRSGHRMIAL-K-KHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKI-EPLGAGP 211 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~-p~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~-~~~~~~p 211 (265)
..+.+||+.++++........ .....-.+++.. + +.+|+.... +.|++||+. .+.+.+ .......
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~----------~~l~~~d~~-g~~~~~~~~~~~~~ 114 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR----------LGLLVVQTD-GTFEEIAKKDSEGR 114 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----------TEEEEEETT-SCEEECCSBCTTSC
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC----------CCEEEEeCC-CCEEEEEeccCCCc
Confidence 568999998888876643100 001111233332 4 688886531 358899998 777665 3321000
Q ss_pred CCCCCceEEEeCCCeEEEEcC
Q psy14331 212 APRSGCQMAATPDGKILISGG 232 (265)
Q Consensus 212 ~~~~~~~~~~~~~~~iyi~GG 232 (265)
....-..++.-.++.+|+...
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEEC
T ss_pred cccCCcCEEECCCCCEEEEec
Confidence 111123444444678887653
No 147
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=66.80 E-value=46 Score=26.33 Aligned_cols=97 Identities=10% Similarity=0.190 Sum_probs=46.8
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..+|..++.++.+.... ........+.. ++.+++.|+.+ ..+
T Consensus 72 ~g~~l~s~s~D-----------~~v~iw~~~~~~~~~~~~~~--~h~~~v~~v~~sp~~~~l~s~s~D---------~~v 129 (345)
T 3fm0_A 72 CGNYLASASFD-----------ATTCIWKKNQDDFECVTTLE--GHENEVKSVAWAPSGNLLATCSRD---------KSV 129 (345)
T ss_dssp TSSEEEEEETT-----------SCEEEEEECCC-EEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT---------SCE
T ss_pred CCCEEEEEECC-----------CcEEEEEccCCCeEEEEEcc--CCCCCceEEEEeCCCCEEEEEECC---------CeE
Confidence 56667777643 34667777777666554332 11111122222 56667777653 347
Q ss_pred EEEEcCCC-ceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 192 HIFDLETY-AWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 192 ~~y~~~~~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
..+|+.+. .++.+.... .....-..++...++.+++.|+.+
T Consensus 130 ~iwd~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 130 WVWEVDEEDEYECVSVLN--SHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp EEEEECTTSCEEEEEEEC--CCCSCEEEEEECSSSSCEEEEETT
T ss_pred EEEECCCCCCeEEEEEec--CcCCCeEEEEECCCCCEEEEEeCC
Confidence 77887654 344333321 111111223333355666666654
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=66.79 E-value=69 Score=28.39 Aligned_cols=65 Identities=12% Similarity=-0.053 Sum_probs=32.7
Q ss_pred ceeEEEcCC-CcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 137 DLWVFRMGE-KKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 137 ~~~~yd~~~-~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
.++.+|+.+ ++-..+.............+...+..|++... +... ....|+.+|+.+.+...+..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~-~~~~----~~~~i~~~d~~~g~~~~~~~ 329 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQ-SRDQ----KKLDLVEVTLASNQQRVLAH 329 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEE-ETTS----SEEEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEe-cccC----CeEEEEEEECCCCceEEEEE
Confidence 688889887 76554432100001111122222344544432 2211 13578999999888766543
No 149
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=66.33 E-value=19 Score=28.90 Aligned_cols=25 Identities=12% Similarity=-0.189 Sum_probs=15.3
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWE 149 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~ 149 (265)
+.++++.|+.+ ..+.++|..+++-.
T Consensus 269 g~~~lasgs~D-----------~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 269 SVPFLASLSED-----------CSLAVLDSSLSELF 293 (344)
T ss_dssp SSCCEEEEETT-----------SCEEEECTTCCEEE
T ss_pred CCeEEEEEeCC-----------CeEEEEECCCCcEE
Confidence 34566666642 34778888877543
No 150
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=65.80 E-value=49 Score=26.33 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=32.2
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCE-EEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKH-LVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..+|+....-..+... ...-.+++.. ++. +++.|+.+ ..|
T Consensus 174 ~~~~l~~~~~d-----------~~i~i~d~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s~~~d---------~~i 229 (383)
T 3ei3_B 174 SRQMLATGDST-----------GRLLLLGLDGHEIFKEKLH----KAKVTHAEFNPRCDWLMATSSVD---------ATV 229 (383)
T ss_dssp TTTEEEEEETT-----------SEEEEEETTSCEEEEEECS----SSCEEEEEECSSCTTEEEEEETT---------SEE
T ss_pred CCCEEEEECCC-----------CCEEEEECCCCEEEEeccC----CCcEEEEEECCCCCCEEEEEeCC---------CEE
Confidence 55666666642 4588888855444333321 1111122222 333 66767653 357
Q ss_pred EEEEcCC
Q psy14331 192 HIFDLET 198 (265)
Q Consensus 192 ~~y~~~~ 198 (265)
..||+.+
T Consensus 230 ~iwd~~~ 236 (383)
T 3ei3_B 230 KLWDLRN 236 (383)
T ss_dssp EEEEGGG
T ss_pred EEEeCCC
Confidence 7888876
No 151
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=65.64 E-value=41 Score=25.37 Aligned_cols=62 Identities=11% Similarity=0.192 Sum_probs=37.2
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEE-----EecCCCCCC------CcCceEEEE--CCEEEEEcCcc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEK-----IVCKDTPPS------RSGHRMIAL--KKHLVVFGGFH 179 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~-----~~~~~~p~~------~~~~~~~~~--~~~iyv~GG~~ 179 (265)
.++++|++-| +..|+||..+++-.. +. ...|.. ..-.++... ++++|+|-|
T Consensus 128 ~~~k~yfFkG-------------~~yw~~d~~~~~~~~gyPk~i~-~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-- 191 (227)
T 3lp9_A 128 RGKEVYLFKG-------------DQYARIDYGSNSMVNKEIKSIS-SGYPCFRNTIFESGADAAFASHKTNEVYFFKD-- 191 (227)
T ss_dssp STTEEEEEET-------------TEEEEEETTTTEESSSSCEEHH-HHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--
T ss_pred CCCEEEEEEC-------------CEEEEEeCCCccccCCCCeEHH-HCCCCccccccCCCccEEEEcCCCceEEEEEC--
Confidence 4689999987 358899976553211 11 011211 222244443 589999987
Q ss_pred CCCCccccCCceEEEEcCCC
Q psy14331 180 DNLREAKYYNDVHIFDLETY 199 (265)
Q Consensus 180 ~~~~~~~~~~~v~~y~~~~~ 199 (265)
+..|+||..+.
T Consensus 192 ---------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 192 ---------DHYARVKVTPX 202 (227)
T ss_dssp ---------TEEEEEECCSS
T ss_pred ---------CEEEEEECCcc
Confidence 46788998766
No 152
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=64.75 E-value=72 Score=28.63 Aligned_cols=94 Identities=15% Similarity=0.143 Sum_probs=49.7
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCce
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
.++.|++++|.. +-+.+||+.+++++.......+......++... ++.|++ |. ...+
T Consensus 481 ~~g~lWi~~~t~-----------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWi-gt----------~~Gl 538 (758)
T 3ott_A 481 NEGNVWVLLYNN-----------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWV-GF----------HGGV 538 (758)
T ss_dssp TTSCEEEEETTC-----------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEE-EE----------TTEE
T ss_pred CCCCEEEEccCC-----------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEE-Ee----------cCce
Confidence 357788866532 348899999998887743221111111122222 467776 32 1358
Q ss_pred EEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 192 HIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 192 ~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
.+||+.+.+++.... ..+|.. ...+++. .++.|++..
T Consensus 539 ~~~~~~~~~~~~~~~-~gl~~~-~i~~i~~-~~g~lWi~t 575 (758)
T 3ott_A 539 MRINPKDESQQSISF-GSFSNN-EILSMTC-VKNSIWVST 575 (758)
T ss_dssp EEECC--CCCCBCCC-CC---C-CEEEEEE-ETTEEEEEE
T ss_pred EEEecCCCceEEecc-cCCCcc-ceEEEEE-CCCCEEEEC
Confidence 899999888776642 123332 2233333 367777754
No 153
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=63.53 E-value=18 Score=29.58 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=44.4
Q ss_pred eEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCCCCccccceEEEecCCC-EEEEEcCcccCCCc
Q psy14331 53 FLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRCSHQMVALSADKG-QLWMFGGEFSSASE 129 (265)
Q Consensus 53 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~~~~~~~~~~~~~-~iyv~GG~~~~~~~ 129 (265)
+.+.++++++|+.......... +...++++++|. ......++.+...+..... ..++ .+|+....
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~-----~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s-~Dg~~~l~v~~~~------ 339 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKL-----HAAAKEVTSVTGLVGQTSSQISLGHDVDAISVA-QDGGPDLYALSAG------ 339 (373)
T ss_pred EEECCCCCEEEEEeccCCcccc-----cCCCCeEEEEECCCCEEEEEEECCCCcCeEEEC-CCCCeEEEEEcCC------
Confidence 4455678899997541111110 011478999999 3333444544444444433 3344 45554422
Q ss_pred cccccCCceeEEEcCCCcEE
Q psy14331 130 SQFHHYKDLWVFRMGEKKWE 149 (265)
Q Consensus 130 ~~~~~~~~~~~yd~~~~~W~ 149 (265)
.+++.++|..+.+-.
T Consensus 340 -----~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 340 -----TEVLHIYDAGAGDQD 354 (373)
T ss_pred -----CCeEEEEECCCCCEE
Confidence 367999999877644
No 154
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=63.14 E-value=52 Score=25.66 Aligned_cols=103 Identities=11% Similarity=0.042 Sum_probs=46.7
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEE-ECCEEEEEcCccCCCCc-----ccc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIA-LKKHLVVFGGFHDNLRE-----AKY 187 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~-~~~~iyv~GG~~~~~~~-----~~~ 187 (265)
++.+++.|+. -..+..+|..+.+....-... .+. ..++. -++..+++|+.+..... ..-
T Consensus 229 ~~~~l~~~~~-----------d~~i~v~d~~~~~~~~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 293 (369)
T 3zwl_B 229 DLTYFITSSR-----------DTNSFLVDVSTLQVLKKYETD--CPL--NTAVITPLKEFIILGGGQEAKDVTTTSANEG 293 (369)
T ss_dssp TSSEEEEEET-----------TSEEEEEETTTCCEEEEEECS--SCE--EEEEECSSSSEEEEEECCC------------
T ss_pred CCCEEEEecC-----------CceEEEEECCCCceeeeecCC--CCc--eeEEecCCCceEEEeecCCCceEEEEecCCC
Confidence 4556666653 245888998877644332221 111 12222 24455555554332110 000
Q ss_pred CCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 188 YNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 188 ~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
...+..||..+.+=...-. .....-..+....++++++.|+.+.
T Consensus 294 ~~~i~~~d~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 294 KFEARFYHKIFEEEIGRVQ----GHFGPLNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp -CEEEEEETTTCCEEEEEE----CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEEEecCCCcchhhee----cccCcEEEEEECCCCCEEEEEcCCC
Confidence 1257788887654322211 1111122333444677788777653
No 155
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=62.84 E-value=72 Score=27.20 Aligned_cols=66 Identities=12% Similarity=0.136 Sum_probs=35.8
Q ss_pred CEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecC---CCCCCCcCceEEEECCEEEEEcCccCCCCccccCCce
Q psy14331 115 GQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCK---DTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 115 ~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
+.+++.|+.+ ..+..+|..+.+....-.. .. .... .++...++..++.++.+ ..+
T Consensus 219 ~~~l~~~~~d-----------g~i~vwd~~~~~~~~~~~~~~~~~-~~~v-~~~~~~~~~~l~~~~~d---------~~i 276 (615)
T 1pgu_A 219 GEFVITVGSD-----------RKISCFDGKSGEFLKYIEDDQEPV-QGGI-FALSWLDSQKFATVGAD---------ATI 276 (615)
T ss_dssp CCEEEEEETT-----------CCEEEEETTTCCEEEECCBTTBCC-CSCE-EEEEESSSSEEEEEETT---------SEE
T ss_pred CCEEEEEeCC-----------CeEEEEECCCCCEeEEeccccccc-CCce-EEEEEcCCCEEEEEcCC---------CcE
Confidence 6666766642 4588999887764432201 10 1111 11222166666666642 458
Q ss_pred EEEEcCCCceE
Q psy14331 192 HIFDLETYAWK 202 (265)
Q Consensus 192 ~~y~~~~~~W~ 202 (265)
..||+.+.+-.
T Consensus 277 ~~wd~~~~~~~ 287 (615)
T 1pgu_A 277 RVWDVTTSKCV 287 (615)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCcEE
Confidence 88998876543
No 156
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=62.33 E-value=64 Score=26.48 Aligned_cols=66 Identities=9% Similarity=0.116 Sum_probs=37.9
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
.+..++.|+.+ ..+..+|+.+..-...... .......+...++.+++.|+ + +.+..
T Consensus 361 ~~~~l~s~s~d-----------g~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~-d---------g~i~i 416 (464)
T 3v7d_B 361 SDKFLVSAAAD-----------GSIRGWDANDYSRKFSYHH---TNLSAITTFYVSDNILVSGS-E---------NQFNI 416 (464)
T ss_dssp CSSEEEEEETT-----------SEEEEEETTTCCEEEEEEC---TTCCCEEEEEECSSEEEEEE-T---------TEEEE
T ss_pred cCCEEEEEeCC-----------CcEEEEECCCCceeeeecC---CCCccEEEEEeCCCEEEEec-C---------CeEEE
Confidence 45566666642 4588899887653322211 12222234444666767665 2 36889
Q ss_pred EEcCCCceEE
Q psy14331 194 FDLETYAWKK 203 (265)
Q Consensus 194 y~~~~~~W~~ 203 (265)
||+.+.+-..
T Consensus 417 wd~~~g~~~~ 426 (464)
T 3v7d_B 417 YNLRSGKLVH 426 (464)
T ss_dssp EETTTCCEEE
T ss_pred EECCCCcEEe
Confidence 9999876554
No 157
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=61.89 E-value=74 Score=27.96 Aligned_cols=71 Identities=10% Similarity=0.176 Sum_probs=41.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEc-CCC--cEEEEecCCC---CCCC---cCceEEE--ECCE----EEEEcCc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRM-GEK--KWEKIVCKDT---PPSR---SGHRMIA--LKKH----LVVFGGF 178 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~---p~~~---~~~~~~~--~~~~----iyv~GG~ 178 (265)
++.||+.+.. ...++.+|. .++ .|+.-..... |... ...+.++ .+++ ||+...
T Consensus 62 ~g~vyv~~~~-----------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 62 DGKMYIHTSF-----------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp TTEEEEECST-----------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred CCEEEEEeCC-----------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 8999998652 145889998 776 4876432210 0001 1123344 4555 776432
Q ss_pred cCCCCccccCCceEEEEcCCCc--eEEec
Q psy14331 179 HDNLREAKYYNDVHIFDLETYA--WKKIE 205 (265)
Q Consensus 179 ~~~~~~~~~~~~v~~y~~~~~~--W~~~~ 205 (265)
-..|+++|..+.+ |+.-.
T Consensus 130 ---------dg~l~AlDa~TG~~~W~~~~ 149 (599)
T 1w6s_A 130 ---------DGNVAALNAETGETVWKVEN 149 (599)
T ss_dssp ---------TSEEEEEETTTCCEEEEEEC
T ss_pred ---------CCEEEEEECCCCCEEEeecC
Confidence 2468999988754 87543
No 158
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=61.80 E-value=59 Score=25.84 Aligned_cols=63 Identities=16% Similarity=0.094 Sum_probs=34.3
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE----CCEEEEEcCccCCCCccccCC
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL----KKHLVVFGGFHDNLREAKYYN 189 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~ 189 (265)
++.+++.|+.+ ..+..+|+.+.+-....... .... ++... ++.+++.|+.+ .
T Consensus 111 ~~~~l~s~~~d-----------~~i~iwd~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~---------~ 166 (408)
T 4a11_B 111 DTGMFTSSSFD-----------KTLKVWDTNTLQTADVFNFE--ETVY--SHHMSPVSTKHCLVAVGTRG---------P 166 (408)
T ss_dssp CTTCEEEEETT-----------SEEEEEETTTTEEEEEEECS--SCEE--EEEECSSCSSCCEEEEEESS---------S
T ss_pred CCcEEEEEeCC-----------CeEEEeeCCCCccceeccCC--Ccee--eeEeecCCCCCcEEEEEcCC---------C
Confidence 45566666542 45888998887654443221 2211 12121 33466666643 4
Q ss_pred ceEEEEcCCCc
Q psy14331 190 DVHIFDLETYA 200 (265)
Q Consensus 190 ~v~~y~~~~~~ 200 (265)
.+..||+.+.+
T Consensus 167 ~v~~~d~~~~~ 177 (408)
T 4a11_B 167 KVQLCDLKSGS 177 (408)
T ss_dssp SEEEEESSSSC
T ss_pred eEEEEeCCCcc
Confidence 58888887654
No 159
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=60.91 E-value=66 Score=26.12 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=40.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCC-CCC--------------CCcCceEEEE---CCEEEEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKD-TPP--------------SRSGHRMIAL---KKHLVVF 175 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~p~--------------~~~~~~~~~~---~~~iyv~ 175 (265)
.+.||+.+. ...+++.+-...+|+.+.... .|. ....++++.. .+.||+.
T Consensus 128 ~~~l~~g~~------------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg 195 (394)
T 3b7f_A 128 PGTWYAGTS------------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIG 195 (394)
T ss_dssp TTCEEEEEE------------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEE
T ss_pred CCEEEEEec------------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEE
Confidence 567877642 134777777778999875321 111 1112233332 2467764
Q ss_pred cCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 176 GGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 176 GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
... ..|++.+-...+|+.+..
T Consensus 196 ~~~----------ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 196 MSS----------GGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp EET----------BEEEEESSTTSSCEECCT
T ss_pred ECC----------CCEEEECCCCCCceECCC
Confidence 321 247777777789998864
No 160
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=60.88 E-value=51 Score=25.68 Aligned_cols=54 Identities=7% Similarity=0.011 Sum_probs=28.9
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
++.+++.|+.+ ..|..||+.+.+-. .... .....-..++...+++.++.|+.++
T Consensus 284 ~~~~l~s~~~d---------g~i~iwd~~~~~~~--~~~~--~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 284 VHGTLATVGSD---------GRFSFWDKDARTKL--KTSE--QLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp TTCCEEEEETT---------SCEEEEETTTTEEE--EECC--CCSSCEEEEEECTTSSCEEEEECCC
T ss_pred CCCEEEEEccC---------CeEEEEECCCCcEE--EEec--CCCCCceEEEECCCCCeEEEEeccc
Confidence 45666777653 35888998875432 2221 1112223344444677777776543
No 161
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=60.57 E-value=58 Score=25.37 Aligned_cols=96 Identities=9% Similarity=-0.022 Sum_probs=48.0
Q ss_pred CEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceE
Q psy14331 115 GQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 115 ~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
+.+++.|+.+ ..+..||+.+.+-...-.. ....-.++... ++.+++.|+.+ ..|.
T Consensus 85 ~~~l~~~~~d-----------g~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~s~~~d---------g~i~ 141 (366)
T 3k26_A 85 HPLLAVAGSR-----------GIIRIINPITMQCIKHYVG---HGNAINELKFHPRDPNLLLSVSKD---------HALR 141 (366)
T ss_dssp CEEEEEEETT-----------CEEEEECTTTCCEEEEEES---CCSCEEEEEECSSCTTEEEEEETT---------SCEE
T ss_pred CCEEEEecCC-----------CEEEEEEchhceEeeeecC---CCCcEEEEEECCCCCCEEEEEeCC---------CeEE
Confidence 5677777742 4588888877653222111 11111122222 45677777653 3588
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.||+.+.+-...-... ......-..+....++..++.|+.+
T Consensus 142 iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 142 LWNIQTDTLVAIFGGV-EGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp EEETTTTEEEEEECST-TSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeecCeEEEEeccc-ccccCceeEEEECCCCCEEEEecCC
Confidence 8998876543332100 0111222333333456677777664
No 162
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=60.47 E-value=54 Score=25.03 Aligned_cols=129 Identities=11% Similarity=-0.065 Sum_probs=62.9
Q ss_pred CceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEeeecCCCCCCCccccceEEEecCCCEEEEEcCcccCCC
Q psy14331 49 ANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNLFVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSAS 128 (265)
Q Consensus 49 ~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~ 128 (265)
..-+.+..++++.+|+++.. ...+++||+-........+......+.+. .+++||+....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~--------------~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-~dg~l~v~~~~----- 88 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVR--------------QNRTWAWSDDGQLSPEMHPSHHQNGHCLN-KQGHLIACSHG----- 88 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGG--------------GTEEEEEETTSCEEEEESSCSSEEEEEEC-TTCCEEEEETT-----
T ss_pred cccCCeEeCCCCEEEEEeCC--------------CCEEEEEECCCCeEEEECCCCCcceeeEC-CCCcEEEEecC-----
Confidence 34456666666668887752 34677777600000000111111223332 26778776432
Q ss_pred ccccccCCceeEEEcCCCcEEEEecCC--CCCCCcCceEEEE-CCEEEEE----cCccCC----CCccccCCceEEEEcC
Q psy14331 129 ESQFHHYKDLWVFRMGEKKWEKIVCKD--TPPSRSGHRMIAL-KKHLVVF----GGFHDN----LREAKYYNDVHIFDLE 197 (265)
Q Consensus 129 ~~~~~~~~~~~~yd~~~~~W~~~~~~~--~p~~~~~~~~~~~-~~~iyv~----GG~~~~----~~~~~~~~~v~~y~~~ 197 (265)
...+.+||+.+++.+.+.... .+..+.. .++.. ++.+|+. |..... .........|+++++.
T Consensus 89 ------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 89 ------LRRLERQREPGGEWESIADSFEGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp ------TTEEEEECSTTCCEEEEECEETTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred ------CCeEEEEcCCCCcEEEEeeccCCCCCCCCC-CEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 246899999888877653221 0111111 23333 6778885 431100 0000113579999987
Q ss_pred CCceEEec
Q psy14331 198 TYAWKKIE 205 (265)
Q Consensus 198 ~~~W~~~~ 205 (265)
.+.+.+.
T Consensus 162 -g~~~~~~ 168 (296)
T 3e5z_A 162 -GTLSAPI 168 (296)
T ss_dssp -SCEEEEE
T ss_pred -CCEEEee
Confidence 5555543
No 163
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=60.43 E-value=89 Score=27.49 Aligned_cols=65 Identities=3% Similarity=-0.003 Sum_probs=35.6
Q ss_pred CCceeEEEcCCC-cEEEEecCCCCCC--CcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 135 YKDLWVFRMGEK-KWEKIVCKDTPPS--RSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 135 ~~~~~~yd~~~~-~W~~~~~~~~p~~--~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
...++.+|+.++ ..+.+.....+.. ........- ++++++.+..++ ...||.++......+.+..
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECCC
T ss_pred eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecCC
Confidence 357899999988 6666542211010 011123333 567665554332 3568888876666666543
No 164
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=59.44 E-value=61 Score=25.24 Aligned_cols=81 Identities=14% Similarity=0.078 Sum_probs=39.3
Q ss_pred CceeEEEcCC-CcEE-EEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCC
Q psy14331 136 KDLWVFRMGE-KKWE-KIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPA 212 (265)
Q Consensus 136 ~~~~~yd~~~-~~W~-~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~ 212 (265)
..+..||+.+ ..-. .+... ...-.+++.. ++..++.|+.+ ..+..||+.+.+-...-.. .
T Consensus 197 g~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~---~- 259 (369)
T 3zwl_B 197 GKISKYDVSNNYEYVDSIDLH----EKSISDMQFSPDLTYFITSSRD---------TNSFLVDVSTLQVLKKYET---D- 259 (369)
T ss_dssp SEEEEEETTTTTEEEEEEECC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEEEEEEC---S-
T ss_pred CEEEEEECCCCcEeEEEEecC----CCceeEEEECCCCCEEEEecCC---------ceEEEEECCCCceeeeecC---C-
Confidence 4588999887 3322 22211 1111122222 55566666542 4588899887654433321 1
Q ss_pred CCCCceEEEeCCCeEEEEcCcc
Q psy14331 213 PRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 213 ~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.....++...+++.+++|+.+
T Consensus 260 -~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 260 -CPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp -SCEEEEEECSSSSEEEEEECC
T ss_pred -CCceeEEecCCCceEEEeecC
Confidence 111233344456666666544
No 165
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=58.72 E-value=95 Score=27.27 Aligned_cols=67 Identities=9% Similarity=0.104 Sum_probs=36.0
Q ss_pred CceeEEEcCCCc--EEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCc--eEEecc
Q psy14331 136 KDLWVFRMGEKK--WEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYA--WKKIEP 206 (265)
Q Consensus 136 ~~~~~yd~~~~~--W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~--W~~~~~ 206 (265)
..++.+|..+++ |+.-.....+......+-++.++.+|+-.+.... .....|+.||..+.+ |+.-..
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~----g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL----GVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG----TCCCEEEEEETTTCCEEEEEESS
T ss_pred CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc----CCCCeEEEEECCCCcEEEEEcCC
Confidence 458899988774 8754221000001122334568887763321110 123579999998754 876543
No 166
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=58.69 E-value=17 Score=32.21 Aligned_cols=21 Identities=19% Similarity=0.648 Sum_probs=16.1
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCC
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK 146 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~ 146 (265)
.++++|++-| +..|+||..++
T Consensus 547 ~~gktYFFkG-------------~~ywryd~~~~ 567 (631)
T 1ck7_A 547 KNKKTYIFAG-------------DKFWRYNEVKK 567 (631)
T ss_dssp TTCEEEEEET-------------TEEEEEETTTT
T ss_pred CCCeEEEEEC-------------CEEEEEcCCcc
Confidence 3689999977 35889997655
No 167
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=58.58 E-value=74 Score=26.00 Aligned_cols=89 Identities=13% Similarity=0.192 Sum_probs=43.8
Q ss_pred CceeEEEcCCCcEEEEecCCCCC-CCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCceEEec-cCCCCCCC
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPP-SRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIE-PLGAGPAP 213 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~-~~~~~p~~ 213 (265)
..+..||..+++-...-.. +. ..........++.+++.|+.+ ..|..||+.+.+....- .....+..
T Consensus 339 g~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~ 407 (445)
T 2ovr_B 339 STVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIRNLVTLESGGSG 407 (445)
T ss_dssp SCEEEEETTTCCEEEEECS--TTSCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEEEEEECTTGGGT
T ss_pred CeEEEEECCCCcEEEEEcc--CCCCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceeeeeeccccCCCC
Confidence 4588899877653222111 11 111222334466677777653 45888999887653322 11000111
Q ss_pred CCCceEEEeCCCeEEEEcCccc
Q psy14331 214 RSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 214 ~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..-.++....++.++++|+.++
T Consensus 408 ~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 408 GVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp CEEEEEEECSSEEEEEEECSSS
T ss_pred ceEEEEEecCCEEEEEEcccCC
Confidence 1122333333456667777654
No 168
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=58.45 E-value=24 Score=30.43 Aligned_cols=57 Identities=5% Similarity=-0.102 Sum_probs=32.4
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCceE
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWK 202 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~ 202 (265)
..++.+|+.+++++.+.... ......+..-+++.++.+..++ ...|+.+|+.+.+.+
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~---~~~~~~~~SpDG~~l~~~~~~~-------~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGE---GSFSSASISPGMKVTAGLETAR-------EARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEEEETTTCCCEEECCSS---CEEEEEEECTTSCEEEEEECSS-------CEEEEEECTTTCCEE
T ss_pred eEEEEEcCCCCCceEeecCC---CccccceECCCCCEEEEccCCC-------eeEEEEEcCCCCcEE
Confidence 45999999999888764321 1111111112454444332211 246899999988777
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=58.42 E-value=93 Score=27.08 Aligned_cols=63 Identities=11% Similarity=0.001 Sum_probs=37.6
Q ss_pred CceeEEEcCCCcEEEEecCCCC--CCCc---CceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTP--PSRS---GHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p--~~~~---~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
..++.+|+.+++++.+...... .+.. ....+.. ++++++.+.. + ...|+.+|+.+...+.+..
T Consensus 265 ~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~-------~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 265 WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G-------AAVLGILDPESGELVDAAG 333 (662)
T ss_dssp CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S-------SCEEEEEETTTTEEEECCS
T ss_pred eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C-------ccEEEEEECCCCcEEEecC
Confidence 4699999888888876543210 0111 1123333 5667666554 2 3578889998887766654
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=57.05 E-value=1.1e+02 Score=27.26 Aligned_cols=63 Identities=16% Similarity=0.255 Sum_probs=39.9
Q ss_pred CCceeEEEcCC------C--cEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCC---ceEE
Q psy14331 135 YKDLWVFRMGE------K--KWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETY---AWKK 203 (265)
Q Consensus 135 ~~~~~~yd~~~------~--~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~---~W~~ 203 (265)
.++++.+|..+ . .++.+.... ... .......++.+|+.+..+.. ...|+.+|+.+. .|+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~--~~~-~~~~s~dg~~l~~~s~~~~~------~~~l~~~d~~~~~~~~~~~ 328 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNF--EGE-YDYVTNEGTVFTFKTNRHSP------NYRLINIDFTDPEESKWKV 328 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSS--SSC-EEEEEEETTEEEEEECTTCT------TCEEEEEETTSCCGGGCEE
T ss_pred ccEEEEEECcccccccCCccceEEeeCCC--CcE-EEEEeccCCEEEEEECCCCC------CCEEEEEeCCCCCccccee
Confidence 36789999876 4 577775432 111 12233347788888754322 357999998875 5888
Q ss_pred ecc
Q psy14331 204 IEP 206 (265)
Q Consensus 204 ~~~ 206 (265)
+..
T Consensus 329 l~~ 331 (710)
T 2xdw_A 329 LVP 331 (710)
T ss_dssp EEC
T ss_pred ccC
Confidence 765
No 171
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=56.43 E-value=41 Score=27.65 Aligned_cols=27 Identities=7% Similarity=0.137 Sum_probs=16.5
Q ss_pred EEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCC
Q psy14331 108 VALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGE 145 (265)
Q Consensus 108 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~ 145 (265)
+.....+..+++.|+.. +.+.+||..+
T Consensus 283 i~~~p~~~~~l~tg~~d-----------g~v~vwd~~~ 309 (430)
T 2xyi_A 283 LSFNPYSEFILATGSAD-----------KTVALWDLRN 309 (430)
T ss_dssp EEECSSCTTEEEEEETT-----------SEEEEEETTC
T ss_pred EEeCCCCCCEEEEEeCC-----------CeEEEEeCCC
Confidence 33433344578887752 4588888876
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=55.74 E-value=72 Score=24.97 Aligned_cols=78 Identities=17% Similarity=0.193 Sum_probs=42.9
Q ss_pred eEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCC-----CCCCc-CceEEEE-C-CEEEEEcCc
Q psy14331 107 MVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDT-----PPSRS-GHRMIAL-K-KHLVVFGGF 178 (265)
Q Consensus 107 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-----p~~~~-~~~~~~~-~-~~iyv~GG~ 178 (265)
.+.+...++.||+..+.. ...+.+||+....-..+..... +.... -+.++.. + +.+|+....
T Consensus 147 ~ia~~~~~g~lyv~d~~~----------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYC----------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp EEEECTTTCCEEEEECSS----------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred EEEEeCCCCeEEEEeCCC----------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 444543368999987521 3568899865443333321110 01111 2234443 4 799997643
Q ss_pred cCCCCccccCCceEEEEcCCCceEE
Q psy14331 179 HDNLREAKYYNDVHIFDLETYAWKK 203 (265)
Q Consensus 179 ~~~~~~~~~~~~v~~y~~~~~~W~~ 203 (265)
.+.|.+||+.+.+...
T Consensus 217 ---------~~~I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 217 ---------NGRIQCFKTDTKEFVR 232 (329)
T ss_dssp ---------TTEEEEEETTTCCEEE
T ss_pred ---------CCEEEEEECCCCcEEE
Confidence 3568999998666543
No 173
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=55.59 E-value=98 Score=26.48 Aligned_cols=59 Identities=7% Similarity=0.041 Sum_probs=35.1
Q ss_pred eeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 138 LWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 138 ~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
+..||+.+++-+.+.... . ...+..-+++.++++..+... ...|+.+|+.+.+.+.+..
T Consensus 134 ~~l~d~~~g~~~~l~~~~--~---~~~~~spDG~~la~~~~~~~~-----~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 134 VALYALDGGGLRELARLP--G---FGFVSDIRGDLIAGLGFFGGG-----RVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEEEEETTEEEEEEEES--S---CEEEEEEETTEEEEEEEEETT-----EEEEEEEETTTCCCEEECC
T ss_pred ceEEEccCCcEEEeecCC--C---ceEEECCCCCEEEEEEEcCCC-----CeEEEEEcCCCCCceEeec
Confidence 447788888776665331 2 222233355555555443221 2459999999999887754
No 174
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=55.35 E-value=64 Score=24.27 Aligned_cols=139 Identities=6% Similarity=-0.035 Sum_probs=72.1
Q ss_pred ceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCccccceEEEecCCCEEEEEcCccc
Q psy14331 50 NFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 50 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
.+.+++.+.++.||+.-.. .+.+.++|+ ..... +........+.++..++.||+.....
T Consensus 81 p~~ia~d~~~~~lyv~d~~--------------~~~I~~~~~~g~~~~~~~--~~~~~~P~~i~vd~~~g~lyv~~~~~- 143 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQ--------------LDRIEVAKMDGTQRRVLF--DTGLVNPRGIVTDPVRGNLYWTDWNR- 143 (267)
T ss_dssp EEEEEEETTTTEEEEEETT--------------TTEEEEEETTSCSCEEEE--CSSCSSEEEEEEETTTTEEEEEECCS-
T ss_pred ccEEEEEecCCeEEEEECC--------------CCEEEEEEcCCCCEEEEE--ECCCCCccEEEEeeCCCEEEEEECCC-
Confidence 3456665557889986431 356777776 11110 11111223445554578999975321
Q ss_pred CCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEE
Q psy14331 126 SASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKK 203 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~ 203 (265)
....++++++....-+.+.... ...-.+++.. ++.||+.--. .+.|+++|+....-+.
T Consensus 144 --------~~~~I~~~~~dg~~~~~~~~~~---~~~P~gia~d~~~~~lyv~d~~---------~~~I~~~~~~g~~~~~ 203 (267)
T 1npe_A 144 --------DNPKIETSHMDGTNRRILAQDN---LGLPNGLTFDAFSSQLCWVDAG---------THRAECLNPAQPGRRK 203 (267)
T ss_dssp --------SSCEEEEEETTSCCCEEEECTT---CSCEEEEEEETTTTEEEEEETT---------TTEEEEEETTEEEEEE
T ss_pred --------CCcEEEEEecCCCCcEEEEECC---CCCCcEEEEcCCCCEEEEEECC---------CCEEEEEecCCCceEE
Confidence 0356888887654433332221 1122234443 4688886532 3679999987644333
Q ss_pred eccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 204 IEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 204 ~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
+... ...+ .+++. .++.+|+..
T Consensus 204 ~~~~--~~~P---~gi~~-d~~~lyva~ 225 (267)
T 1npe_A 204 VLEG--LQYP---FAVTS-YGKNLYYTD 225 (267)
T ss_dssp EEEC--CCSE---EEEEE-ETTEEEEEE
T ss_pred EecC--CCCc---eEEEE-eCCEEEEEE
Confidence 3221 1111 34443 377888864
No 175
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=54.24 E-value=88 Score=25.54 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=45.9
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++..++.|+.+ ..+..+|..+++-...-.. ..........++..++.|+.+ ..|..
T Consensus 288 ~~~~l~~~~~d-----------~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~l~~~~~d---------g~i~v 343 (445)
T 2ovr_B 288 DGIHVVSGSLD-----------TSIRVWDVETGNCIHTLTG----HQSLTSGMELKDNILVSGNAD---------STVKI 343 (445)
T ss_dssp CSSEEEEEETT-----------SCEEEEETTTCCEEEEECC----CCSCEEEEEEETTEEEEEETT---------SCEEE
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCCEEEEEcC----CcccEEEEEEeCCEEEEEeCC---------CeEEE
Confidence 55556666542 4588899887754322111 111112233345556666643 35888
Q ss_pred EEcCCCceE-EeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 194 FDLETYAWK-KIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 194 y~~~~~~W~-~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
||+.+.+-. .+... ......-..+.+ ++.+++.|+.+.
T Consensus 344 wd~~~~~~~~~~~~~---~~~~~~v~~~~~-~~~~l~s~~~dg 382 (445)
T 2ovr_B 344 WDIKTGQCLQTLQGP---NKHQSAVTCLQF-NKNFVITSSDDG 382 (445)
T ss_dssp EETTTCCEEEEECST---TSCSSCEEEEEE-CSSEEEEEETTS
T ss_pred EECCCCcEEEEEccC---CCCCCCEEEEEE-CCCEEEEEeCCC
Confidence 998775432 22221 001111222334 566677766543
No 176
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=54.23 E-value=88 Score=25.52 Aligned_cols=63 Identities=6% Similarity=0.137 Sum_probs=35.9
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++.+++.|+.+ ..+..+|..+++-...-.. ..........++..++.|+.+ ..|..
T Consensus 182 ~~~~l~sg~~d-----------g~i~vwd~~~~~~~~~~~~----h~~~v~~l~~~~~~l~s~s~d---------g~i~v 237 (435)
T 1p22_A 182 DERVIITGSSD-----------STVRVWDVNTGEMLNTLIH----HCEAVLHLRFNNGMMVTCSKD---------RSIAV 237 (435)
T ss_dssp CSSEEEEEETT-----------SCEEEEESSSCCEEEEECC----CCSCEEEEECCTTEEEEEETT---------SCEEE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCcEEEEEcC----CCCcEEEEEEcCCEEEEeeCC---------CcEEE
Confidence 66777777743 4588899888764332111 111122333355566666653 35788
Q ss_pred EEcCCCc
Q psy14331 194 FDLETYA 200 (265)
Q Consensus 194 y~~~~~~ 200 (265)
+|+.+..
T Consensus 238 wd~~~~~ 244 (435)
T 1p22_A 238 WDMASPT 244 (435)
T ss_dssp EECSSSS
T ss_pred EeCCCCC
Confidence 8887754
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=53.67 E-value=81 Score=24.95 Aligned_cols=66 Identities=9% Similarity=0.080 Sum_probs=37.3
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCC----C---CccccCCceEEEEcCCCceEEecc
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDN----L---REAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~----~---~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
..++.+|+.+++...+.... . .. ....- +++++++.+.+.. . ........|+.+|+.+.+.+.+..
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~--~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMVMP--P--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp EEEEEECTTTCCEEEEEECC--S--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEE
T ss_pred ceEEEEECCCCCeEEeeeCC--C--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccC
Confidence 34999999988877765432 1 11 22233 5566665442110 0 000113679999999888776665
No 178
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=53.55 E-value=69 Score=24.08 Aligned_cols=61 Identities=13% Similarity=0.166 Sum_probs=38.5
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEE--ecC-CCCC------CCcCceEEEE--CCEEEEEcCccCC
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKI--VCK-DTPP------SRSGHRMIAL--KKHLVVFGGFHDN 181 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~--~~~-~~p~------~~~~~~~~~~--~~~iyv~GG~~~~ 181 (265)
.++++|++-| +..|+||..+++...- ... ..|. +..-.++... ++++|+|-|
T Consensus 126 ~~gk~yfFkG-------------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG---- 188 (225)
T 3oyo_A 126 KGKEVYLFKG-------------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG---- 188 (225)
T ss_dssp STTEEEEEET-------------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET----
T ss_pred CCCcEEEEeC-------------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC----
Confidence 4789999987 3589999776654431 000 0111 2223345553 789999987
Q ss_pred CCccccCCceEEEEcC
Q psy14331 182 LREAKYYNDVHIFDLE 197 (265)
Q Consensus 182 ~~~~~~~~~v~~y~~~ 197 (265)
+..|+||..
T Consensus 189 -------~~ywr~d~~ 197 (225)
T 3oyo_A 189 -------QNYVRIDFT 197 (225)
T ss_dssp -------TEEEEEECC
T ss_pred -------CEEEEEeCC
Confidence 467899987
No 179
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=53.49 E-value=68 Score=24.02 Aligned_cols=59 Identities=17% Similarity=0.470 Sum_probs=33.3
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEE--EEecC--CCCCCCcCceEEEECCEEEEEcCccCCCCccccC
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWE--KIVCK--DTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYY 188 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~--~~~~~--~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 188 (265)
.++++|++=|. .+|+++....... .+... .+|... -++...++++|+|-|
T Consensus 27 ~~g~~yfFkg~-------------~~Wr~~~~~~~~~p~~Is~~wpgLP~~I--DAA~~~~~~~yfFkG----------- 80 (219)
T 1hxn_A 27 NHGATYVFSGS-------------HYWRLDTNRDGWHSWPIAHQWPQGPSTV--DAAFSWEDKLYLIQD----------- 80 (219)
T ss_dssp TTSCEEEEETT-------------EEEESSSSSCTTCCEEGGGTCTTSCSSC--SEEEEETTEEEEEET-----------
T ss_pred CCCcEEEEeCC-------------EEEEEcCCCCCCCceEhhhhccCCCCCc--cEEEEECCcEEEecC-----------
Confidence 37889998774 2555554332221 11111 233322 245556899999976
Q ss_pred CceEEEEcC
Q psy14331 189 NDVHIFDLE 197 (265)
Q Consensus 189 ~~v~~y~~~ 197 (265)
+.+|+|+..
T Consensus 81 ~~yw~~~~~ 89 (219)
T 1hxn_A 81 TKVYVFLTK 89 (219)
T ss_dssp TEEEEEECS
T ss_pred CEEEEEeCC
Confidence 468888865
No 180
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=53.39 E-value=1.1e+02 Score=26.50 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=43.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCC--cEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK--KWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
+++||+... -..++.+|..++ .|+.-............+.++.++.+|+-.+.... ..-..|
T Consensus 115 ~~~v~v~~~------------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~----~~~g~v 178 (571)
T 2ad6_A 115 AGQIVKKQA------------NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAEL----GVRGAV 178 (571)
T ss_dssp TTEEEEECT------------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGG----TCCCEE
T ss_pred CCEEEEEeC------------CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCcc----CCCCEE
Confidence 888888743 245899999887 48754221000001122334568888775432110 113579
Q ss_pred EEEEcCCC--ceEEec
Q psy14331 192 HIFDLETY--AWKKIE 205 (265)
Q Consensus 192 ~~y~~~~~--~W~~~~ 205 (265)
+.||+.+. .|+.-.
T Consensus 179 ~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 179 NAFDLKTGELKWRAFA 194 (571)
T ss_dssp EEEETTTCCEEEEEES
T ss_pred EEEECCCCcEEEEEcc
Confidence 99999875 487544
No 181
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=52.35 E-value=97 Score=25.43 Aligned_cols=18 Identities=39% Similarity=0.277 Sum_probs=14.1
Q ss_pred CCceEEEeCCCeEEEEcC
Q psy14331 215 SGCQMAATPDGKILISGG 232 (265)
Q Consensus 215 ~~~~~~~~~~~~iyi~GG 232 (265)
..|+++...++++|..|-
T Consensus 286 ~~hs~alt~~G~v~~wG~ 303 (406)
T 4d9s_A 286 WRHTMALTSDGKLYGWGW 303 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCEEEEEcCCCeEEEeeC
Confidence 457777777889999984
No 182
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=52.23 E-value=82 Score=24.57 Aligned_cols=95 Identities=14% Similarity=0.106 Sum_probs=48.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++++++.|+.+ ..+..+|+.+++-... ... ....-.+++.. ++.+++.|+.+ ..|.
T Consensus 175 dg~~lasg~~d-----------g~i~iwd~~~~~~~~~--~~~-h~~~v~~l~~spd~~~l~s~s~d---------g~i~ 231 (321)
T 3ow8_A 175 DGKYLASGAID-----------GIINIFDIATGKLLHT--LEG-HAMPIRSLTFSPDSQLLVTASDD---------GYIK 231 (321)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTTEEEEE--ECC-CSSCCCEEEECTTSCEEEEECTT---------SCEE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCcEEEE--Ecc-cCCceeEEEEcCCCCEEEEEcCC---------CeEE
Confidence 56667776642 4588899888753322 210 11111122222 56777777753 3478
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
.||+.+......-. .....-..++...++..++.|+.+.
T Consensus 232 iwd~~~~~~~~~~~----~h~~~v~~~~~sp~~~~l~s~s~D~ 270 (321)
T 3ow8_A 232 IYDVQHANLAGTLS----GHASWVLNVAFCPDDTHFVSSSSDK 270 (321)
T ss_dssp EEETTTCCEEEEEC----CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEECCCcceeEEEc----CCCCceEEEEECCCCCEEEEEeCCC
Confidence 88887765432211 1111112333344566777776653
No 183
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=51.84 E-value=1.3e+02 Score=26.83 Aligned_cols=74 Identities=15% Similarity=0.178 Sum_probs=43.2
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCC--CcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCc
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGE--KKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYND 190 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 190 (265)
.++.||+...... ....++.+|..+ ..|+.+-+.. ... -..+...++.+++....++ ...
T Consensus 326 dg~~l~~~s~~~~--------~~~~l~~~d~~~~~~~~~~l~~~~--~~~-l~~~~~~~~~lv~~~~~dg-------~~~ 387 (741)
T 1yr2_A 326 VGDQLWFVSGDGA--------PLKKIVRVDLSGSTPRFDTVVPES--KDN-LESVGIAGNRLFASYIHDA-------KSQ 387 (741)
T ss_dssp ETTEEEEEECTTC--------TTCEEEEEECSSSSCEEEEEECCC--SSE-EEEEEEEBTEEEEEEEETT-------EEE
T ss_pred cCCEEEEEECCCC--------CCCEEEEEeCCCCccccEEEecCC--CCe-EEEEEEECCEEEEEEEECC-------EEE
Confidence 4777887754321 135699999887 5798876432 111 1123334777777665433 346
Q ss_pred eEEEEcCCCceEEe
Q psy14331 191 VHIFDLETYAWKKI 204 (265)
Q Consensus 191 v~~y~~~~~~W~~~ 204 (265)
|+.+++....-+.+
T Consensus 388 l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 388 VLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEeCCCCceeec
Confidence 88888755444443
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=51.49 E-value=1.3e+02 Score=26.62 Aligned_cols=84 Identities=21% Similarity=0.205 Sum_probs=45.7
Q ss_pred CCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCc---eEEeccCCCCC
Q psy14331 135 YKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYA---WKKIEPLGAGP 211 (265)
Q Consensus 135 ~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~---W~~~~~~~~~p 211 (265)
..+++.+|..+..++.+.... ... ...+..++.+|+....+.. ...|+.+|+.+.. |+.+.... +
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~---~~~-~~~~~~~g~l~~~s~~~~~------~~~l~~~d~~~~~~~~~~~l~~~~--~ 318 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGV---GAK-YEVHAWKDRFYVLTDEGAP------RQRVFEVDPAKPARASWKEIVPED--S 318 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECS---SCC-EEEEEETTEEEEEECTTCT------TCEEEEEBTTBCSGGGCEEEECCC--S
T ss_pred ceEEEEEcCCCCceEEeecCC---Cce-EEEEecCCcEEEEECCCCC------CCEEEEEeCCCCCccCCeEEecCC--C
Confidence 357888887777888876432 111 1222245556665443221 3579999987754 88776531 1
Q ss_pred CCCCCceEEEeCCCeEEEEcC
Q psy14331 212 APRSGCQMAATPDGKILISGG 232 (265)
Q Consensus 212 ~~~~~~~~~~~~~~~iyi~GG 232 (265)
. ..-..+... ++++++...
T Consensus 319 ~-~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 319 S-ASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp S-CEEEEEEEE-TTEEEEEEE
T ss_pred C-CeEEEEEEE-CCEEEEEEE
Confidence 1 111222223 667666643
No 185
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=51.11 E-value=76 Score=23.85 Aligned_cols=119 Identities=7% Similarity=-0.050 Sum_probs=62.6
Q ss_pred eeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-eecCCC-CCCCccccceEEEecCCCEEEEEcCcccCCC
Q psy14331 51 FSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-FVSAPG-APPPRCSHQMVALSADKGQLWMFGGEFSSAS 128 (265)
Q Consensus 51 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-w~~~~~-~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~ 128 (265)
+.+++.+.++.||+.-.. .+.++++|+ -..... .+........+.++..++.||+.-..
T Consensus 39 ~gi~~d~~~~~ly~~d~~--------------~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~----- 99 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS--------------EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ----- 99 (267)
T ss_dssp EEEEEETTTTEEEEEETT--------------TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT-----
T ss_pred EEEEEecCCCEEEEEECC--------------CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC-----
Confidence 556666567889987431 357888887 000000 01111122233454446899988542
Q ss_pred ccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEe
Q psy14331 129 ESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKI 204 (265)
Q Consensus 129 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~ 204 (265)
.+.+.++++....-+.+.......| ..++.. ++.||+...... ...|+++++....-+.+
T Consensus 100 ------~~~I~~~~~~g~~~~~~~~~~~~~P---~~i~vd~~~g~lyv~~~~~~-------~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 100 ------LDRIEVAKMDGTQRRVLFDTGLVNP---RGIVTDPVRGNLYWTDWNRD-------NPKIETSHMDGTNRRIL 161 (267)
T ss_dssp ------TTEEEEEETTSCSCEEEECSSCSSE---EEEEEETTTTEEEEEECCSS-------SCEEEEEETTSCCCEEE
T ss_pred ------CCEEEEEEcCCCCEEEEEECCCCCc---cEEEEeeCCCEEEEEECCCC-------CcEEEEEecCCCCcEEE
Confidence 3568889887554333322211111 233333 578998753211 25688888876544444
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=50.67 E-value=1.3e+02 Score=26.24 Aligned_cols=69 Identities=14% Similarity=0.069 Sum_probs=38.3
Q ss_pred CCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccC-CCCC
Q psy14331 135 YKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPL-GAGP 211 (265)
Q Consensus 135 ~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~-~~~p 211 (265)
...++..|....+...+... +..+.-|..... +..+|+.-.. .+.|..+|+.+.+-...-.. +..|
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~---------sn~V~ViD~~t~kl~~~i~vgg~~P 387 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANA---------RNKLVVIDTKEGKLVAIEDTGGQTP 387 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGG---------GTEEEEEETTTTEEEEEEECSSSSB
T ss_pred CCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCC---------CCeEEEEECCCCcEEEEEeccCcCC
Confidence 46688888877654444332 234444444333 3345553321 46799999998865443344 3345
Q ss_pred CCC
Q psy14331 212 APR 214 (265)
Q Consensus 212 ~~~ 214 (265)
.+.
T Consensus 388 hpg 390 (567)
T 1qks_A 388 HPG 390 (567)
T ss_dssp CCT
T ss_pred CCc
Confidence 543
No 187
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=49.81 E-value=95 Score=24.59 Aligned_cols=24 Identities=17% Similarity=0.133 Sum_probs=15.6
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW 148 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W 148 (265)
++.+++.|+.+ ..+..||..+.+-
T Consensus 302 ~~~~l~~~~~d-----------g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 302 SGETLCSAGWD-----------GKLRFWDVKTKER 325 (397)
T ss_dssp SSSEEEEEETT-----------SEEEEEETTTTEE
T ss_pred CCCEEEEEeCC-----------CeEEEEEcCCCce
Confidence 45666666632 4588899877653
No 188
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=49.78 E-value=1.4e+02 Score=26.65 Aligned_cols=98 Identities=9% Similarity=0.027 Sum_probs=49.0
Q ss_pred EEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCcc
Q psy14331 108 VALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREA 185 (265)
Q Consensus 108 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~ 185 (265)
++++..++.||+.--.. ...|+++++....-+.+....+ ..-.++++- ++.||+.-..
T Consensus 501 iavDp~~g~ly~td~~~----------~~~I~~~~~dG~~~~~l~~~~l---~~PnGlavd~~~~~LY~aD~~------- 560 (699)
T 1n7d_A 501 IVVDPVHGFMYWTDWGT----------PAKIKKGGLNGVDIYSLVTENI---QWPNGITLDLLSGRLYWVDSK------- 560 (699)
T ss_dssp EECCSSSSCCEECCCSS----------SCCEEBCCSSSCCCCEESCSSC---SSCCCEEECTTTCCEEEEETT-------
T ss_pred EEEccCCCcEEEcccCC----------CCeEEEEeCCCCCeeEEEeCCC---CCccEEEEeccCCEEEEEecC-------
Confidence 34444467788764110 2457777765443222321111 111234443 5788886532
Q ss_pred ccCCceEEEEcCCCceEEeccC-CCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 186 KYYNDVHIFDLETYAWKKIEPL-GAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 186 ~~~~~v~~y~~~~~~W~~~~~~-~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
.+.|+++++....-+.+... ..++.+ .++++. ++.||+.-
T Consensus 561 --~~~I~~~d~dG~~~~~~~~~~~~~~~P---~glavd-~~~lywtd 601 (699)
T 1n7d_A 561 --LHSISSIDVNGGNRKTILEDEKRLAHP---FSLAVF-EDKVFWTD 601 (699)
T ss_dssp --TTEEEEECSSSSCCEEECCCSSSCSSC---CCCEEE-TTEEEEEC
T ss_pred --CCeEEEEccCCCceEEEEecCCcCCCc---eEeEEE-CCEEEEEe
Confidence 35789999876544444332 111222 344444 67888875
No 189
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=49.65 E-value=95 Score=24.56 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=51.5
Q ss_pred ceeEEEcCCCcEEEEecCCCCC---C-CcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCC
Q psy14331 137 DLWVFRMGEKKWEKIVCKDTPP---S-RSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPA 212 (265)
Q Consensus 137 ~~~~yd~~~~~W~~~~~~~~p~---~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~ 212 (265)
.++.+|+.+++-+.+....... . .........+..|++.. .+.......-...|+.+|+.+.+-+.+........
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 343 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDV-QDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWK 343 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------------CCCCEEEEEETTTTEEEEEEECCCCCC
T ss_pred eEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEe-eeccccccCCCCEEEEEeccCCceEEeccccCccc
Confidence 4999999998876665432100 0 00111122233333221 00000000113579999999988777765321000
Q ss_pred ------CCCCceEEEeCCCeEEEEcCccccccccccccceeeceEEEEecCccccc
Q psy14331 213 ------PRSGCQMAATPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPDSKTLR 262 (265)
Q Consensus 213 ------~~~~~~~~~~~~~~iyi~GG~~~~~~~~~~~~~~~~~~~w~~~~~~~~w~ 262 (265)
...........+++.+++...... ..++|.++.....|+
T Consensus 344 ~~~~~~~~~~~~~~~spDg~~l~~~s~~~g-----------~~~l~~~~l~~~~~~ 388 (388)
T 3pe7_A 344 VFEGDRQVTHPHPSFTPDDKQILFTSDVHG-----------KPALYLATLPESVWK 388 (388)
T ss_dssp CBTTBSSTTCCCCEECTTSSEEEEEECTTS-----------SCEEEEEECCGGGGC
T ss_pred ccccccccCCCCccCCCCCCEEEEEecCCC-----------ceeEEEEECChhccC
Confidence 001122233346654444332211 224899998887764
No 190
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=49.38 E-value=86 Score=23.99 Aligned_cols=84 Identities=14% Similarity=0.091 Sum_probs=40.6
Q ss_pred EecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCC--CCcCceEEEE-C-CEEEEEcCccC-CCCc
Q psy14331 110 LSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPP--SRSGHRMIAL-K-KHLVVFGGFHD-NLRE 184 (265)
Q Consensus 110 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~--~~~~~~~~~~-~-~~iyv~GG~~~-~~~~ 184 (265)
+...++.+|+.+.. ...+..+|+.+.+-...-....+. ...-+.++.. + +.+|+...... ....
T Consensus 41 ~s~dg~~l~v~~~~-----------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 109 (337)
T 1pby_B 41 VAPGGRIAYATVNK-----------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTH 109 (337)
T ss_dssp ECTTSSEEEEEETT-----------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSC
T ss_pred EcCCCCEEEEEeCC-----------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccc
Confidence 43334577877653 256899999887644322211000 0011233333 3 46776642100 0000
Q ss_pred cc-cCCceEEEEcCCCceEEe
Q psy14331 185 AK-YYNDVHIFDLETYAWKKI 204 (265)
Q Consensus 185 ~~-~~~~v~~y~~~~~~W~~~ 204 (265)
.. ....|..+|+.+.+....
T Consensus 110 ~~~~~~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 110 FEVQPTRVALYDAETLSRRKA 130 (337)
T ss_dssp EEECCCEEEEEETTTTEEEEE
T ss_pred ccccCceEEEEECCCCcEEEE
Confidence 00 136799999988765433
No 191
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=48.68 E-value=99 Score=24.46 Aligned_cols=66 Identities=11% Similarity=0.045 Sum_probs=36.4
Q ss_pred CCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 135 YKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 135 ~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
...++.+|+.+++-+.+... .....+....- +++.+++....... .....|+.+|+.....+.+..
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~---~~~~~~~~~sp~dg~~l~~~~~~~~~---~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQE---NQWLGHPIYRPYDDSTVAFCHEGPHD---LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEE---SSCEEEEEEETTEEEEEEEEECSCTT---TSSCSEEEEETTSCCCEESCC
T ss_pred cceEEEEECCCCceEEeecC---CccccccEECCCCCCEEEEEEecCCC---CCcceEEEEeCCCCceEEeee
Confidence 36799999998876666432 12222223332 34433333221110 114579999998877666654
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=48.20 E-value=91 Score=23.92 Aligned_cols=115 Identities=9% Similarity=-0.039 Sum_probs=55.8
Q ss_pred eeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe---eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCC
Q psy14331 52 SFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL---FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSAS 128 (265)
Q Consensus 52 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~---w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~ 128 (265)
+.+..+.++.||++.-. ...+++||+ ....-..+ .. ...+... .++.+++..+
T Consensus 17 gp~w~~~~~~l~~~d~~--------------~~~i~~~d~~~~~~~~~~~~--~~-~~~i~~~-~dG~l~v~~~------ 72 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIP--------------AKKVCRWDSFTKQVQRVTMD--AP-VSSVALR-QSGGYVATIG------ 72 (297)
T ss_dssp EEEEETTTTEEEEEETT--------------TTEEEEEETTTCCEEEEECS--SC-EEEEEEB-TTSSEEEEET------
T ss_pred CCeEECCCCEEEEEECC--------------CCEEEEEECCCCcEEEEeCC--Cc-eEEEEEC-CCCCEEEEEC------
Confidence 44555557788887541 356788887 11100111 11 1222332 2566666531
Q ss_pred ccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCC---ccccCCceEEEEcCC
Q psy14331 129 ESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLR---EAKYYNDVHIFDLET 198 (265)
Q Consensus 129 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~---~~~~~~~v~~y~~~~ 198 (265)
+.+.+||+.+++++.+.......+........+ ++.+|+-. ...... .......|+++++..
T Consensus 73 -------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~-~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 73 -------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGT-MAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp -------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEE-EECCSBTTBCCTTCEEEEEECTTS
T ss_pred -------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEec-CCcccccccccCCCcEEEEEECCC
Confidence 358899999998887754421111111122222 56777632 111100 001134688888753
No 193
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=47.78 E-value=1.2e+02 Score=25.15 Aligned_cols=137 Identities=7% Similarity=-0.013 Sum_probs=68.2
Q ss_pred HHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe---eecCCCCCCC
Q psy14331 25 RDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL---FVSAPGAPPP 101 (265)
Q Consensus 25 ~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~---w~~~~~~p~~ 101 (265)
..+..+|+..+....+.. .......+++.++++.||+... .++.. ...+..++. +.....++..
T Consensus 159 ~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~--~~~~~--------~~~v~~~~~~g~~~~~~~l~~~ 225 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITND--QNNND--------RPNNYILTRESGFKVITELTKG 225 (430)
T ss_dssp EEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEEC--CSCTT--------SEEEEEEEGGGTSCSEEEEEEC
T ss_pred CcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeC--CCCcc--------cceEEEEeCCCceeeeeeeccC
Confidence 356778888877766333 2223344555556677999764 12111 123445555 2211111111
Q ss_pred ccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-C-CEEEEEcCcc
Q psy14331 102 RCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-K-KHLVVFGGFH 179 (265)
Q Consensus 102 r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~-~~iyv~GG~~ 179 (265)
...+.. .++..++.||+.--. .+.+++|++.+..-..+.... ....-..++.. + +.||+.--.
T Consensus 226 ~~p~gi-avdp~~g~lyv~d~~-----------~~~V~~~~~~~~~~~~~~~~~--~~~~P~gia~~pdG~~lyv~d~~- 290 (430)
T 3tc9_A 226 QNCNGA-ETHPINGELYFNSWN-----------AGQVFRYDFTTQETTPLFTIQ--DSGWEFHIQFHPSGNYAYIVVVN- 290 (430)
T ss_dssp SSCCCE-EECTTTCCEEEEETT-----------TTEEEEEETTTTEEEEEEECS--SSSCCEEEEECTTSSEEEEEETT-
T ss_pred CCceEE-EEeCCCCEEEEEECC-----------CCEEEEEECCCCcEEEEEEcC--CCCcceeEEEcCCCCEEEEEECC-
Confidence 222333 344446788887431 356999999877653333221 11111123332 3 458887432
Q ss_pred CCCCccccCCceEEEEcC
Q psy14331 180 DNLREAKYYNDVHIFDLE 197 (265)
Q Consensus 180 ~~~~~~~~~~~v~~y~~~ 197 (265)
.+.|++++..
T Consensus 291 --------~~~I~~~~~d 300 (430)
T 3tc9_A 291 --------QHYILRSDYD 300 (430)
T ss_dssp --------TTEEEEEEEE
T ss_pred --------CCEEEEEeCC
Confidence 3567776654
No 194
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=47.55 E-value=98 Score=24.10 Aligned_cols=94 Identities=15% Similarity=0.161 Sum_probs=48.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
+++.++.|+. -..+..||..+.+-...-.. ....-.+++.. +++.++.|+.+ ..|.
T Consensus 133 dg~~l~~g~~-----------dg~v~i~~~~~~~~~~~~~~---~~~~v~~~~~spdg~~lasg~~d---------g~i~ 189 (321)
T 3ow8_A 133 DSQYLATGTH-----------VGKVNIFGVESGKKEYSLDT---RGKFILSIAYSPDGKYLASGAID---------GIIN 189 (321)
T ss_dssp TSSEEEEECT-----------TSEEEEEETTTCSEEEEEEC---SSSCEEEEEECTTSSEEEEEETT---------SCEE
T ss_pred CCCEEEEEcC-----------CCcEEEEEcCCCceeEEecC---CCceEEEEEECCCCCEEEEEcCC---------CeEE
Confidence 5666777664 24577888877653322111 11111122222 56677777653 3578
Q ss_pred EEEcCCCceEE-eccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 193 IFDLETYAWKK-IEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 193 ~y~~~~~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
.||+.+.+-.. +.. ....-..++...++++++.|+.+.
T Consensus 190 iwd~~~~~~~~~~~~-----h~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 190 IFDIATGKLLHTLEG-----HAMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EEETTTTEEEEEECC-----CSSCCCEEEECTTSCEEEEECTTS
T ss_pred EEECCCCcEEEEEcc-----cCCceeEEEEcCCCCEEEEEcCCC
Confidence 89988765322 221 111112334444667777777654
No 195
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=47.39 E-value=1.1e+02 Score=24.78 Aligned_cols=135 Identities=10% Similarity=0.039 Sum_probs=71.2
Q ss_pred eeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCCCccccceEEEecCCCEEEEEcCccc
Q psy14331 52 SFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 52 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
.+++.+.++.||+.-.. .+.++++++ ......+. ....++++..++.||+.--..
T Consensus 163 glavd~~~g~lY~~d~~--------------~~~I~~~~~dg~~~~~l~~~~l~----~P~giavdp~~g~ly~td~~~- 223 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSG--------------TSRIEVANLDGAHRKVLLWQSLE----KPRAIALHPMEGTIYWTDWGN- 223 (386)
T ss_dssp CEEEETTTTEEEEEETT--------------TTEEEECBTTSCSCEEEECSSCS----CEEEEEEETTTTEEEEEECSS-
T ss_pred EEEEEeCCCeEEEEcCC--------------CCeEEEEeCCCCceEEeecCCCC----CCcEEEEEcCCCeEEEeccCC-
Confidence 44554457888886431 345666665 11111222 223445655578999873211
Q ss_pred CCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEE
Q psy14331 126 SASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKK 203 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~ 203 (265)
...++++++....-+.+.... ...-.+++.- ++.||+.-.. .+.|+++|+....-+.
T Consensus 224 ---------~~~I~r~~~dG~~~~~~~~~~---~~~PnGlavd~~~~~lY~aD~~---------~~~I~~~d~dG~~~~~ 282 (386)
T 3v65_B 224 ---------TPRIEASSMDGSGRRIIADTH---LFWPNGLTIDYAGRRMYWVDAK---------HHVIERANLDGSHRKA 282 (386)
T ss_dssp ---------SCEEEEEETTSCSCEEEECSS---CSCEEEEEEEGGGTEEEEEETT---------TTEEEEECTTSCSCEE
T ss_pred ---------CCEEEEEeCCCCCcEEEEECC---CCCeeeEEEeCCCCEEEEEECC---------CCEEEEEeCCCCeeEE
Confidence 257999998765444443221 1111234443 6789997432 4679999987644333
Q ss_pred eccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 204 IEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 204 ~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
+...+ ++.+ .++++ .++.||+.-
T Consensus 283 ~~~~~-~~~P---~giav-~~~~ly~td 305 (386)
T 3v65_B 283 VISQG-LPHP---FAITV-FEDSLYWTD 305 (386)
T ss_dssp EECSS-CSSE---EEEEE-ETTEEEEEE
T ss_pred EEECC-CCCc---eEEEE-ECCEEEEee
Confidence 32211 1211 34444 478888874
No 196
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=46.12 E-value=1.1e+02 Score=24.99 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=14.5
Q ss_pred CCceEEEeCCCeEEEEcCc
Q psy14331 215 SGCQMAATPDGKILISGGY 233 (265)
Q Consensus 215 ~~~~~~~~~~~~iyi~GG~ 233 (265)
..|+++...++++|..|-.
T Consensus 346 ~~hs~alt~~G~v~~wG~n 364 (413)
T 1a12_A 346 ASVGYAVTKDGRVFAWGMG 364 (413)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred cceEEEEeCCCCEEEecCC
Confidence 4577777778899999843
No 197
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=46.11 E-value=1.1e+02 Score=24.04 Aligned_cols=70 Identities=11% Similarity=0.167 Sum_probs=42.7
Q ss_pred EecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEE-ECCEEEEEcCccCCCCccccC
Q psy14331 110 LSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIA-LKKHLVVFGGFHDNLREAKYY 188 (265)
Q Consensus 110 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 188 (265)
+...++.+|+++-. ...+++||+.+++...... +. .-.+++. -++.+++...
T Consensus 56 ~~~~~~~l~~~d~~-----------~~~i~~~d~~~~~~~~~~~---~~--~v~~i~~~~dg~l~v~~~----------- 108 (326)
T 2ghs_A 56 FDPASGTAWWFNIL-----------ERELHELHLASGRKTVHAL---PF--MGSALAKISDSKQLIASD----------- 108 (326)
T ss_dssp EETTTTEEEEEEGG-----------GTEEEEEETTTTEEEEEEC---SS--CEEEEEEEETTEEEEEET-----------
T ss_pred EeCCCCEEEEEECC-----------CCEEEEEECCCCcEEEEEC---CC--cceEEEEeCCCeEEEEEC-----------
Confidence 33335778887543 2468999998887655432 11 1122222 3677777531
Q ss_pred CceEEEEcCCCceEEecc
Q psy14331 189 NDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 189 ~~v~~y~~~~~~W~~~~~ 206 (265)
..|++||+.+.+.+.+..
T Consensus 109 ~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 109 DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp TEEEEEETTTCCEEEEEC
T ss_pred CCEEEEECCCCcEEEEee
Confidence 248899998888876654
No 198
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=45.55 E-value=1e+02 Score=23.72 Aligned_cols=91 Identities=10% Similarity=-0.048 Sum_probs=45.9
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCce
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
.++.||+.+-. .+.++++++ ++..+..... ... ..+++.. ++.+|+.... ...|
T Consensus 55 ~g~~l~~~d~~-----------~~~i~~~~~-~g~~~~~~~~---~~~-~~gl~~d~dG~l~v~~~~---------~~~v 109 (305)
T 3dr2_A 55 AQRTLVWSDLV-----------GRRVLGWRE-DGTVDVLLDA---TAF-TNGNAVDAQQRLVHCEHG---------RRAI 109 (305)
T ss_dssp GGTEEEEEETT-----------TTEEEEEET-TSCEEEEEES---CSC-EEEEEECTTSCEEEEETT---------TTEE
T ss_pred CCCEEEEEECC-----------CCEEEEEeC-CCCEEEEeCC---CCc-cceeeECCCCCEEEEECC---------CCEE
Confidence 34557777542 356888888 4554444322 111 1223322 5677776421 2458
Q ss_pred EEEEcCCCceEEeccCCC-CCCCCCCceEEEeCCCeEEEE
Q psy14331 192 HIFDLETYAWKKIEPLGA-GPAPRSGCQMAATPDGKILIS 230 (265)
Q Consensus 192 ~~y~~~~~~W~~~~~~~~-~p~~~~~~~~~~~~~~~iyi~ 230 (265)
.+|++. .+.+.+..... .+... -..++.-.++.+|+.
T Consensus 110 ~~~~~~-g~~~~~~~~~~~~~~~~-~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 110 TRSDAD-GQAHLLVGRYAGKRLNS-PNDLIVARDGAIWFT 147 (305)
T ss_dssp EEECTT-SCEEEEECEETTEECSC-CCCEEECTTSCEEEE
T ss_pred EEECCC-CCEEEEEeccCCCccCC-CCCEEECCCCCEEEe
Confidence 888876 66665543210 01111 123444457788885
No 199
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=44.26 E-value=1.3e+02 Score=24.43 Aligned_cols=84 Identities=18% Similarity=0.232 Sum_probs=41.3
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCC
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAP 213 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~ 213 (265)
..+..+|+.+++-...-... ... .+++.. ++.+++..|.. -+.|..||..+.+ .+.... ...
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~--~~v--~~~~~~~~~~~lv~~sg~~--------d~~I~iwd~~~~~--~v~~l~--gH~ 364 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAH--SQV--CSILWSPHYKELISGHGFA--------QNQLVIWKYPTMA--KVAELK--GHT 364 (420)
T ss_dssp CEEEEEETTTTEEEEEEECS--SCE--EEEEEETTTTEEEEEECTT--------TCCEEEEETTTCC--EEEEEC--CCS
T ss_pred CEEEEEeCCccccceeeccc--cce--eeeeecCCCCeEEEEEecC--------CCEEEEEECCCCc--EEEEEc--CCC
Confidence 34778898887654433221 111 122222 44555554532 2458888887643 333321 011
Q ss_pred CCCceEEEeCCCeEEEEcCccc
Q psy14331 214 RSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 214 ~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..-..++...++++++.||.+.
T Consensus 365 ~~V~~l~~spdg~~l~S~s~D~ 386 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAAADE 386 (420)
T ss_dssp SCEEEEEECTTSSCEEEEETTT
T ss_pred CCEEEEEEcCCCCEEEEEecCC
Confidence 1123334444677788877654
No 200
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=43.62 E-value=1e+02 Score=23.21 Aligned_cols=81 Identities=19% Similarity=0.123 Sum_probs=38.6
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCC
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPR 214 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~ 214 (265)
..+..||..+.+-...-.. ....-.+++.. ++. ++.|+. -..|..||+.+.+-...-.. +..
T Consensus 205 g~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~-l~~~~~---------dg~v~iwd~~~~~~~~~~~~---~~~- 267 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEG---HESFVYCIKLLPNGD-IVSCGE---------DRTVRIWSKENGSLKQVITL---PAI- 267 (313)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSC-EEEEET---------TSEEEEECTTTCCEEEEEEC---SSS-
T ss_pred CeEEEEECCchhhhhhhhc---CCceEEEEEEecCCC-EEEEec---------CCEEEEEECCCCceeEEEec---cCc-
Confidence 4588899887653222111 11111122222 443 455554 24688899888765443331 211
Q ss_pred CCceEEEeCCCeEEEEcCcc
Q psy14331 215 SGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 215 ~~~~~~~~~~~~iyi~GG~~ 234 (265)
.-..+....+++ ++.|+.+
T Consensus 268 ~i~~~~~~~~~~-~~~~~~d 286 (313)
T 3odt_A 268 SIWSVDCMSNGD-IIVGSSD 286 (313)
T ss_dssp CEEEEEECTTSC-EEEEETT
T ss_pred eEEEEEEccCCC-EEEEeCC
Confidence 123334444556 4455554
No 201
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=42.94 E-value=1.1e+02 Score=23.56 Aligned_cols=95 Identities=12% Similarity=0.130 Sum_probs=47.2
Q ss_pred CEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceEE
Q psy14331 115 GQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 115 ~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
+.+++.|+.+ ..+..+|..+........... ....-.+++.. ++..++.|+.+ ..|..
T Consensus 54 g~~l~~~~~d-----------g~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d---------g~v~i 112 (368)
T 3mmy_A 54 GNFLIAGSWA-----------NDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASCD---------KTAKM 112 (368)
T ss_dssp SEEEEEEETT-----------SEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEETT---------SEEEE
T ss_pred ceEEEEECCC-----------CcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcCC---------CcEEE
Confidence 4777777742 457788887633322111110 01111122222 45566666542 35888
Q ss_pred EEcCCCceEEeccCCCCCCCCCCceEEE--eCCCeEEEEcCccc
Q psy14331 194 FDLETYAWKKIEPLGAGPAPRSGCQMAA--TPDGKILISGGYSK 235 (265)
Q Consensus 194 y~~~~~~W~~~~~~~~~p~~~~~~~~~~--~~~~~iyi~GG~~~ 235 (265)
+|+.+.+-..+... .. .-..+.. ..++.+++.|+.+.
T Consensus 113 wd~~~~~~~~~~~~---~~--~v~~~~~~~~~~~~~l~~~~~dg 151 (368)
T 3mmy_A 113 WDLSSNQAIQIAQH---DA--PVKTIHWIKAPNYSCVMTGSWDK 151 (368)
T ss_dssp EETTTTEEEEEEEC---SS--CEEEEEEEECSSCEEEEEEETTS
T ss_pred EEcCCCCceeeccc---cC--ceEEEEEEeCCCCCEEEEccCCC
Confidence 99988776554432 11 1122222 34566677766543
No 202
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=42.78 E-value=87 Score=23.95 Aligned_cols=28 Identities=18% Similarity=0.361 Sum_probs=18.2
Q ss_pred CEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 170 KHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 170 ~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
+.+++.|+.+ ..|..+|+.+..|..+..
T Consensus 67 g~~l~s~s~D---------~~v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 67 GTILASCSYD---------GKVMIWKEENGRWSQIAV 94 (297)
T ss_dssp CSEEEEEETT---------TEEEEEEBSSSCBCCCEE
T ss_pred CCEEEEEcCC---------CEEEEEEcCCCceEEEEE
Confidence 4566666653 357788888877765443
No 203
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=42.59 E-value=1.5e+02 Score=24.91 Aligned_cols=124 Identities=10% Similarity=0.118 Sum_probs=66.9
Q ss_pred cCCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeE-EEc-----CCCcEEEEecCCCCCCCcCceEEE
Q psy14331 94 SAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWV-FRM-----GEKKWEKIVCKDTPPSRSGHRMIA 167 (265)
Q Consensus 94 ~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~-yd~-----~~~~W~~~~~~~~p~~~~~~~~~~ 167 (265)
.++..|....-|+.+.+ ++.=|++|=.+.+-. -.++-. |=+ ....-.+.-+..........|+-.
T Consensus 276 ~L~~i~~vTe~HSFa~i---~~~~fa~GyHnGDv~------PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 276 DLGLIPSVTEVHSFATI---DNNGFAMGYHQGDVA------PREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp ECCSCTTCSEEEEEEEC---SSSCEEEEEEECSSS------SCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred ccccccceeeeeeeeEe---cCCceEEEeccCCCC------cceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 34555655566777777 666667775543322 122221 111 111222211111112233445666
Q ss_pred ECCEEEEEc-CccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCC--ceEEEeCCCeEEEEcCccc
Q psy14331 168 LKKHLVVFG-GFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSG--CQMAATPDGKILISGGYSK 235 (265)
Q Consensus 168 ~~~~iyv~G-G~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~--~~~~~~~~~~iyi~GG~~~ 235 (265)
.++.+|+.- |.... ..-+.+.+-+.....|+.+.- |...+. ...+.+ ++.||+||-..+
T Consensus 347 YdgvLyLtTRgt~~~----~~GS~L~rs~d~Gq~w~slrf----p~nvHhtnlPFakv-gD~l~mFgsERA 408 (670)
T 3ju4_A 347 YDGVLYLITRGTRGD----RLGSSLHRSRDIGQTWESLRF----PHNVHHTTLPFAKV-GDDLIMFGSERA 408 (670)
T ss_dssp ETTEEEEEEEESCTT----SCCCEEEEESSTTSSCEEEEC----TTCCCSSCCCEEEE-TTEEEEEEECSS
T ss_pred hCCEEEEEecCcCCC----CCcceeeeecccCCchhheec----cccccccCCCccee-CCEEEEEecccc
Confidence 799999976 43332 234677888888899999987 333322 223344 899999996543
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=42.51 E-value=1.2e+02 Score=23.69 Aligned_cols=117 Identities=8% Similarity=-0.050 Sum_probs=57.6
Q ss_pred eeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe---eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCC
Q psy14331 52 SFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL---FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSAS 128 (265)
Q Consensus 52 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~---w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~ 128 (265)
+.+..++++.+|+++.. -..+++||+ ....-..+ ..-.+.+... ++++++...
T Consensus 53 gp~~~~~~~~l~~~d~~--------------~~~i~~~d~~~~~~~~~~~~--~~v~~i~~~~--dg~l~v~~~------ 108 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNIL--------------ERELHELHLASGRKTVHALP--FMGSALAKIS--DSKQLIASD------ 108 (326)
T ss_dssp EEEEETTTTEEEEEEGG--------------GTEEEEEETTTTEEEEEECS--SCEEEEEEEE--TTEEEEEET------
T ss_pred CCeEeCCCCEEEEEECC--------------CCEEEEEECCCCcEEEEECC--CcceEEEEeC--CCeEEEEEC------
Confidence 34555556788887541 256788887 11110112 1122222222 678777531
Q ss_pred ccccccCCceeEEEcCCCcEEEEecCCCCCCCcCc-eEEEE-CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEe
Q psy14331 129 ESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGH-RMIAL-KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKI 204 (265)
Q Consensus 129 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~ 204 (265)
..++++|+.+++.+.+.......+.... .++.. ++.+|+-. ..... ......|++++ +.+.+.+
T Consensus 109 -------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~-~~~~~--~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 109 -------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGT-MGRKA--ETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp -------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEE-EETTC--CTTCEEEEEEE--TTEEEEE
T ss_pred -------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEe-CCCcC--CCCceEEEEEe--CCcEEEe
Confidence 2488999999888776543210111111 22222 56677632 21110 01235788998 4555544
No 205
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=42.49 E-value=1.8e+02 Score=25.72 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=45.0
Q ss_pred cCCCEEEEEcCcccCCCccccccCCceeEEEcCCC---cEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCcccc
Q psy14331 112 ADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK---KWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKY 187 (265)
Q Consensus 112 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 187 (265)
..++.||+.+..... ...++.+|+.+. .|+.+.+.. ....-..+... ++.+++....++
T Consensus 295 ~dg~~l~~~s~~~~~--------~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~lv~~~~~~g------- 357 (710)
T 2xdw_A 295 NEGTVFTFKTNRHSP--------NYRLINIDFTDPEESKWKVLVPEH--EKDVLEWVACVRSNFLVLCYLHDV------- 357 (710)
T ss_dssp EETTEEEEEECTTCT--------TCEEEEEETTSCCGGGCEEEECCC--SSCEEEEEEEETTTEEEEEEEETT-------
T ss_pred ccCCEEEEEECCCCC--------CCEEEEEeCCCCCcccceeccCCC--CCCeEEEEEEEcCCEEEEEEEECC-------
Confidence 346788888654221 356899998875 588876432 11112233344 667777665433
Q ss_pred CCceEEEEcCCCc-eEEec
Q psy14331 188 YNDVHIFDLETYA-WKKIE 205 (265)
Q Consensus 188 ~~~v~~y~~~~~~-W~~~~ 205 (265)
...|+.+|+.+.+ .+.+.
T Consensus 358 ~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp EEEEEEEETTTCCEEEEEC
T ss_pred EEEEEEEECCCCCEEEecC
Confidence 3468899986554 44443
No 206
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=42.27 E-value=1e+02 Score=23.88 Aligned_cols=71 Identities=13% Similarity=0.095 Sum_probs=37.1
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE----CCEEEEEcCccCCCCccccCC
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL----KKHLVVFGGFHDNLREAKYYN 189 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~ 189 (265)
++++++.|+.+ ..+..+|+.++....+.... .....-..+.. ++.+++.|+.+ .
T Consensus 24 ~g~~lasgs~D-----------~~v~lwd~~~~~~~~~~~l~--gH~~~V~~v~~~~~~~~~~l~s~s~D---------~ 81 (316)
T 3bg1_A 24 YGTRLATCSSD-----------RSVKIFDVRNGGQILIADLR--GHEGPVWQVAWAHPMYGNILASCSYD---------R 81 (316)
T ss_dssp GGCEEEEEETT-----------TEEEEEEEETTEEEEEEEEE--CCSSCEEEEEECCGGGSSCEEEEETT---------S
T ss_pred CCCEEEEEeCC-----------CeEEEEEecCCCcEEEEEEc--CCCccEEEEEeCCCCCCCEEEEEECC---------C
Confidence 45666666642 34677787766543333221 00011112222 24566666653 3
Q ss_pred ceEEEEcCCCceEEecc
Q psy14331 190 DVHIFDLETYAWKKIEP 206 (265)
Q Consensus 190 ~v~~y~~~~~~W~~~~~ 206 (265)
.|..+|+.+..|+.+..
T Consensus 82 ~v~iWd~~~~~~~~~~~ 98 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHE 98 (316)
T ss_dssp CEEEECCSSSCCCEEEE
T ss_pred EEEEEECCCCcceEEEE
Confidence 47788888877765543
No 207
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=42.18 E-value=87 Score=23.75 Aligned_cols=149 Identities=7% Similarity=0.059 Sum_probs=0.0
Q ss_pred ccccceeeeecccccHHHHHHHHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccC
Q psy14331 5 WDRHAMSWTIMFNEDIEKIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALD 84 (265)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~ 84 (265)
|++++ ++.+..+.. +..+|..+.+... ..........-..+....++..++.|+. -.
T Consensus 33 WS~~~-~lAvg~D~t-------V~iWd~~tg~~~~-~~~~~~~~~~V~~v~~~~~~~~l~sgs~--------------Dg 89 (318)
T 4ggc_A 33 WSSGN-VLAVALDNS-------VYLWSASSGDILQ-LLQMEQPGEYISSVAWIKEGNYLAVGTS--------------SA 89 (318)
T ss_dssp ECTTS-EEEEEETTE-------EEEEETTTCCEEE-EEECCSTTCCEEEEEECTTSSEEEEEET--------------TS
T ss_pred ECCCC-EEEEEeCCE-------EEEEECCCCCEEE-EEEecCCCCeEEEEEECCCCCEEEEEEC--------------CC
Q ss_pred ceEEEEe--eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcC
Q psy14331 85 HLILMNL--FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSG 162 (265)
Q Consensus 85 ~~~~yd~--w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~ 162 (265)
.+..+|. ......+........+... .+.+++.|+. ...+..++..+.......... ......
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~~~~~~---~~~~l~s~~~-----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 154 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARVGSLSW---NSYILSSGSR-----------SGHIHHHDVRVAEHHVATLSG-HSQEVC 154 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEE---ETTEEEEEET-----------TSEEEEEETTSSSCEEEEEEC-CSSCEE
T ss_pred cEEEeecCCceeEEEecCccceEEEeec---CCCEEEEEec-----------CCceEeeecCCCceeEEEEcC-ccCceE
Q ss_pred ceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCc
Q psy14331 163 HRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYA 200 (265)
Q Consensus 163 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~ 200 (265)
......++..++.|+.++. +..+|+.+.+
T Consensus 155 ~~~~~~~~~~l~s~~~d~~---------i~iwd~~~~~ 183 (318)
T 4ggc_A 155 GLRWAPDGRHLASGGNDNL---------VNVWPSAPGE 183 (318)
T ss_dssp EEEECTTSSEEEEEETTSC---------EEEEESSCBT
T ss_pred EEEEcCCCCEEEEEecCcc---------eeEEECCCCc
No 208
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=41.85 E-value=1.3e+02 Score=23.95 Aligned_cols=100 Identities=17% Similarity=0.212 Sum_probs=51.3
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCC----CcCceEEE--ECCEEEEEcCccCCCCcccc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPS----RSGHRMIA--LKKHLVVFGGFHDNLREAKY 187 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~----~~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 187 (265)
++..++.|+.+ ..+..+|+.++.-...-... +.. ......+. .++.+++.|+.+
T Consensus 260 ~~~~l~s~s~D-----------~~i~lwd~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-------- 319 (380)
T 3iz6_a 260 DGQRFGTGSDD-----------GTCRLFDMRTGHQLQVYNRE-PDRNDNELPIVTSVAFSISGRLLFAGYSN-------- 319 (380)
T ss_dssp TSSEEEEECSS-----------SCEEEEETTTTEEEEEECCC-CSSSCCSSCSCSEEEECSSSSEEEEECTT--------
T ss_pred CCCeEEEEcCC-----------CeEEEEECCCCcEEEEeccc-ccccccccCceEEEEECCCCCEEEEEECC--------
Confidence 56677777753 34788898887543332211 010 00112222 256677777643
Q ss_pred CCceEEEEcCCCceE-EeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 188 YNDVHIFDLETYAWK-KIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 188 ~~~v~~y~~~~~~W~-~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..+..+|..+..-. .+..... .....-..+....++..++.|+.+.
T Consensus 320 -g~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 320 -GDCYVWDTLLAEMVLNLGTLQN-SHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp -SCEEEEETTTCCEEEEECCSCS-SCCCCCCEEEECSSSSEEEEECTTS
T ss_pred -CCEEEEECCCCceEEEEecccC-CCCCceEEEEECCCCCEEEEeeCCC
Confidence 35888998776543 2222100 1111122334445778888888764
No 209
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=41.80 E-value=1.1e+02 Score=23.53 Aligned_cols=50 Identities=14% Similarity=0.191 Sum_probs=29.9
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
++.+|+.+.. ...|++||+.+.+...+... + ...-.+++.-.++++|+..
T Consensus 55 ~g~l~~~~~~---------~~~i~~~d~~~~~~~~~~~~---~-~~~~~~i~~~~dg~l~v~~ 104 (333)
T 2dg1_A 55 QGQLFLLDVF---------EGNIFKINPETKEIKRPFVS---H-KANPAAIKIHKDGRLFVCY 104 (333)
T ss_dssp TSCEEEEETT---------TCEEEEECTTTCCEEEEEEC---S-SSSEEEEEECTTSCEEEEE
T ss_pred CCCEEEEECC---------CCEEEEEeCCCCcEEEEeeC---C-CCCcceEEECCCCcEEEEe
Confidence 5678877653 24689999998888766431 1 1112333333466777764
No 210
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=41.55 E-value=2.1e+02 Score=26.17 Aligned_cols=136 Identities=7% Similarity=0.009 Sum_probs=72.9
Q ss_pred eeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecC--CCCCCCccccceEEEecCCCEEEEEcCccc
Q psy14331 52 SFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSA--PGAPPPRCSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 52 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~--~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
++++...++.||+.-. . .+.|+++++ ...+ ..+.. ...++++..++.||+.--..
T Consensus 475 GLAvD~~~~~LY~tD~-----~---------~~~I~v~~ldG~~~~~l~~~~l~~----P~gIaVDp~~g~LYwtD~g~- 535 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDS-----V---------LGTVSVADTKGVKRKTLFRENGSK----PRAIVVDPVHGFMYWTDWGT- 535 (791)
T ss_dssp EEEEETTTTEEEEEET-----T---------TTEEEEEETTSSSEEEEEECTTCC----EEEEEEETTTTEEEEEECSS-
T ss_pred eeeeeecCCcEEEEec-----C---------CCeEEEEeCCCCeEEEEEeCCCCC----cceEEEecCCCCEEEecCCC-
Confidence 3444445667777532 1 356777776 1111 12222 23455655578999874110
Q ss_pred CCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEE
Q psy14331 126 SASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKK 203 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~ 203 (265)
...|++.++....=+.+....+ ..-.++++- ++.||+.-.. .+.|+++++....-+.
T Consensus 536 ---------~~~I~~~~~dG~~~~~lv~~~l---~~P~GLavD~~~~~LYwaD~~---------~~~I~~~d~dG~~~~~ 594 (791)
T 3m0c_C 536 ---------PAKIKKGGLNGVDIYSLVTENI---QWPNGITLDLLSGRLYWVDSK---------LHSISSIDVNGGNRKT 594 (791)
T ss_dssp ---------SCEEEEEETTSCCEEEEECSSC---SCEEEEEEETTTTEEEEEETT---------TTEEEEEETTSCSCEE
T ss_pred ---------CCeEEEEecCCCceEEEEeCCC---CCceEEEEecCCCeEEEEeCC---------CCcEEEEecCCCceEE
Confidence 2568899887655444433221 111234443 6799997432 4679999987654444
Q ss_pred ecc-CCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 204 IEP-LGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 204 ~~~-~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
+.. ...++.+ .++++. ++.||+.-
T Consensus 595 v~~~~~~l~~P---~glav~-~~~lYwtD 619 (791)
T 3m0c_C 595 ILEDEKRLAHP---FSLAVF-EDKVFWTD 619 (791)
T ss_dssp EEECTTTTSSE---EEEEEE-TTEEEEEE
T ss_pred EecCCCccCCC---CEEEEe-CCEEEEEE
Confidence 432 2222222 344444 77888875
No 211
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=41.12 E-value=1.7e+02 Score=26.21 Aligned_cols=73 Identities=7% Similarity=0.058 Sum_probs=42.6
Q ss_pred eEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccc
Q psy14331 107 MVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAK 186 (265)
Q Consensus 107 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 186 (265)
.++++..+++||+.-.. .+.|+++|+....-+.+.... .....-.++++..+.||+.-..
T Consensus 544 Glavd~~~~~LY~aD~~-----------~~~I~~~d~dG~~~~~~~~~~-~~~~~P~glavd~~~lywtd~~-------- 603 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSK-----------LHSISSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDII-------- 603 (699)
T ss_dssp CEEECTTTCCEEEEETT-----------TTEEEEECSSSSCCEEECCCS-SSCSSCCCCEEETTEEEEECST--------
T ss_pred EEEEeccCCEEEEEecC-----------CCeEEEEccCCCceEEEEecC-CcCCCceEeEEECCEEEEEeCC--------
Confidence 34454456788887432 466889988654434443221 0112234566678889987632
Q ss_pred cCCceEEEEcCCCc
Q psy14331 187 YYNDVHIFDLETYA 200 (265)
Q Consensus 187 ~~~~v~~y~~~~~~ 200 (265)
.+.|.++|+.+.+
T Consensus 604 -~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 604 -NEAIFSANRLTGS 616 (699)
T ss_dssp -TTCEEEEETTTEE
T ss_pred -CCeEEEEEccCCC
Confidence 3568888876654
No 212
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=41.10 E-value=1.3e+02 Score=23.72 Aligned_cols=95 Identities=14% Similarity=0.218 Sum_probs=48.1
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..+|+.++.-...-.. .........+.. ++.+++.|+.+ ..|
T Consensus 251 ~~~~l~s~s~D-----------~~v~lwd~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~~g~~d---------~~i 308 (354)
T 2pbi_B 251 SGDAFASGSDD-----------ATCRLYDLRADREVAIYSK--ESIIFGASSVDFSLSGRLLFAGYND---------YTI 308 (354)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTTEEEEEECC--TTCCSCEEEEEECTTSSEEEEEETT---------SCE
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCcEEEEEcC--CCcccceeEEEEeCCCCEEEEEECC---------CcE
Confidence 45667777643 3477889877643322211 111222222333 56666666643 358
Q ss_pred EEEEcCCCce-EEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 192 HIFDLETYAW-KKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 192 ~~y~~~~~~W-~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..||+.+.+= ..+.. ....-.++....+++.++.|+.+.
T Consensus 309 ~vwd~~~~~~~~~l~~-----h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 309 NVWDVLKGSRVSILFG-----HENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp EEEETTTCSEEEEECC-----CSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEECCCCceEEEEEC-----CCCcEEEEEECCCCCEEEEEcCCC
Confidence 8888876542 22211 111123333444677777777653
No 213
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=40.84 E-value=1.8e+02 Score=25.28 Aligned_cols=70 Identities=11% Similarity=0.066 Sum_probs=43.5
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCC--cEEEEecCCC-CCCC---cCceEEEECCEEEEEcCccCCCCcccc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK--KWEKIVCKDT-PPSR---SGHRMIALKKHLVVFGGFHDNLREAKY 187 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~-p~~~---~~~~~~~~~~~iyv~GG~~~~~~~~~~ 187 (265)
++.||+.+.. +.++.+|..++ .|+.-..... ..+. ...+.++.++.+|+...
T Consensus 68 ~g~vyv~~~~------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------- 125 (582)
T 1flg_A 68 DGVIYVTASY------------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------- 125 (582)
T ss_dssp TTEEEEEETT------------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET----------
T ss_pred CCEEEEEcCC------------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC----------
Confidence 8999998652 23889998876 4876543220 0000 11234567888887432
Q ss_pred CCceEEEEcCCC--ceEEec
Q psy14331 188 YNDVHIFDLETY--AWKKIE 205 (265)
Q Consensus 188 ~~~v~~y~~~~~--~W~~~~ 205 (265)
...|+.+|..+. .|+.-.
T Consensus 126 dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 126 DASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEECCCCCEEeeecC
Confidence 256999999876 488643
No 214
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=40.02 E-value=1.5e+02 Score=23.98 Aligned_cols=56 Identities=9% Similarity=-0.019 Sum_probs=28.7
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCce-EEeccCCCCCCCCCCceEEEeCCCe-EEEE
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAW-KKIEPLGAGPAPRSGCQMAATPDGK-ILIS 230 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W-~~~~~~~~~p~~~~~~~~~~~~~~~-iyi~ 230 (265)
++++|+..............++|+.+|+.+.+- ..+.. +..-+++....+++ ++++
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~------g~~p~~i~~s~Dg~~~l~v 335 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL------GHDVDAISVAQDGGPDLYA 335 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC------CCCcCeEEECCCCCeEEEE
Confidence 568898654211110011246899999987654 34422 22234455554665 4444
No 215
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=40.02 E-value=1.5e+02 Score=24.02 Aligned_cols=64 Identities=14% Similarity=0.111 Sum_probs=32.7
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++..++.|+.+ ..+..+|+.++.-...-.. .......+.. ++.+++.|+.++ .+
T Consensus 203 ~~~~l~s~s~D-----------~~i~~wd~~~~~~~~~~~~----h~~~v~~~~~~~~g~~l~s~s~D~---------~v 258 (410)
T 1vyh_C 203 NGDHIVSASRD-----------KTIKMWEVQTGYCVKTFTG----HREWVRMVRPNQDGTLIASCSNDQ---------TV 258 (410)
T ss_dssp SSSEEEEEETT-----------SEEEEEETTTCCEEEEEEC----CSSCEEEEEECTTSSEEEEEETTS---------CE
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCcEEEEEeC----CCccEEEEEECCCCCEEEEEcCCC---------eE
Confidence 45566666642 4578889887754322111 1111112222 456666666533 46
Q ss_pred EEEEcCCCce
Q psy14331 192 HIFDLETYAW 201 (265)
Q Consensus 192 ~~y~~~~~~W 201 (265)
..+|+.+..-
T Consensus 259 ~vwd~~~~~~ 268 (410)
T 1vyh_C 259 RVWVVATKEC 268 (410)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCce
Confidence 6677766543
No 216
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=39.78 E-value=2e+02 Score=25.40 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=35.2
Q ss_pred CCceeEEEcCCCc---EEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCceEEe
Q psy14331 135 YKDLWVFRMGEKK---WEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKI 204 (265)
Q Consensus 135 ~~~~~~yd~~~~~---W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~ 204 (265)
...++.+|+.+.. |+.+.+.. + ...-..+...++.+++....++ ...|+.+++....-+.+
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~-~-~~~l~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPED-S-SASLLSVSIVGGHLSLEYLKDA-------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCC-S-SCEEEEEEEETTEEEEEEEETT-------EEEEEEEETTCCEEEEC
T ss_pred CCEEEEEeCCCCCccCCeEEecCC-C-CCeEEEEEEECCEEEEEEEECC-------EEEEEEEeCCCCeeEEe
Confidence 3578899987654 88775432 1 1111223334788877765433 35688888755433333
No 217
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=39.50 E-value=1.3e+02 Score=23.20 Aligned_cols=91 Identities=12% Similarity=0.039 Sum_probs=48.6
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.||+.--. ...++++|+.... ...... +..-++++.. ++.+|+...... ...++
T Consensus 42 ~g~lyv~d~~-----------~~~I~~~d~~g~~-~~~~~~----~~~p~gia~~~dG~l~vad~~~~-------~~~v~ 98 (306)
T 2p4o_A 42 DGTIFVTNHE-----------VGEIVSITPDGNQ-QIHATV----EGKVSGLAFTSNGDLVATGWNAD-------SIPVV 98 (306)
T ss_dssp TSCEEEEETT-----------TTEEEEECTTCCE-EEEEEC----SSEEEEEEECTTSCEEEEEECTT-------SCEEE
T ss_pred CCCEEEEeCC-----------CCeEEEECCCCce-EEEEeC----CCCceeEEEcCCCcEEEEeccCC-------cceEE
Confidence 5678887431 3568899987643 322222 1122333333 567888653211 12488
Q ss_pred EEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEE
Q psy14331 193 IFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILIS 230 (265)
Q Consensus 193 ~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~ 230 (265)
++|+.+.+.+.+... +..+.....+...++.+|+.
T Consensus 99 ~~d~~~g~~~~~~~~---~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 99 SLVKSDGTVETLLTL---PDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp EEECTTSCEEEEEEC---TTCSCEEEEEESSSSEEEEE
T ss_pred EEcCCCCeEEEEEeC---CCccccCcccccCCCcEEEE
Confidence 899888888776653 33343334333334445543
No 218
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=38.99 E-value=2.2e+02 Score=25.62 Aligned_cols=86 Identities=10% Similarity=0.154 Sum_probs=44.9
Q ss_pred eecCCCCCCCccccceEEEec-CCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--
Q psy14331 92 FVSAPGAPPPRCSHQMVALSA-DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-- 168 (265)
Q Consensus 92 w~~~~~~p~~r~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-- 168 (265)
|+.....|.. ..+.... .++.+|+.+. ..+++=.-...+|+.+....+|. . ...+...
T Consensus 558 W~~~~~~~~~----~~i~~~~~~~~~~~a~~~-------------g~v~~S~DgG~tW~~~~~~~~p~-~-~~~i~~~~~ 618 (737)
T 2cn3_A 558 WKVCTNLGMG----AVVASDRVNGKKFYAFYN-------------GKFYISTDGGLTFTDTKAPQLPK-S-VNKIKAVPG 618 (737)
T ss_dssp CEECBTCCTT----CEEEECSSCTTCEEEEET-------------TEEEEESSTTSBCEECCCSSCCS-C-CSEEEEETT
T ss_pred CccCCCCCCC----ceEEEEecCCCEEEEecC-------------CEEEEECCCCcCcccccCCCCCC-c-cceEEEEeC
Confidence 8777655543 2222222 2456777651 12333322346799875433444 2 2234333
Q ss_pred -CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 169 -KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 169 -~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
++.+|+.+.. ..|++-+-...+|+++..
T Consensus 619 ~~g~l~~~~~~----------g~l~~S~D~G~tW~~~~~ 647 (737)
T 2cn3_A 619 KEGHVWLAARE----------GGLWRSTDGGYTFEKLSN 647 (737)
T ss_dssp EEEEEEEECBT----------TCEEEESSTTSSCEECTT
T ss_pred CCCEEEEEeCC----------CcEEEEeCCCcccEECcC
Confidence 4578887642 245554444579999864
No 219
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=38.45 E-value=1.5e+02 Score=23.58 Aligned_cols=103 Identities=13% Similarity=0.092 Sum_probs=51.1
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++..++.++..... ...+..+|....................-.++.. ++++++.|+.+ ..|
T Consensus 230 dg~~l~~~s~d~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D---------~~V 293 (365)
T 4h5i_A 230 DDTVLIAASLKKGK-------GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND---------NSI 293 (365)
T ss_dssp TTEEEEEEEESSSC-------CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT---------SCE
T ss_pred CCCEEEEEecCCcc-------eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC---------CEE
Confidence 66777776643221 2245667766665544322110011111122222 67788888764 358
Q ss_pred EEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 192 HIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 192 ~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..||..+.+-...-.. .....-.+++.-.++++++.|+.+.
T Consensus 294 ~iwd~~~~~~~~~~~~---gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 294 ALVKLKDLSMSKIFKQ---AHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEETTTTEEEEEETT---SSSSCEEEEEECTTSCEEEEEETTS
T ss_pred EEEECCCCcEEEEecC---cccCCEEEEEECCCCCEEEEEeCCC
Confidence 8899887643221111 1111223444445778888877653
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=38.05 E-value=2.1e+02 Score=25.27 Aligned_cols=74 Identities=11% Similarity=0.128 Sum_probs=44.2
Q ss_pred CCCEEEEEcCcccCCCccccccCCceeEEEcCCC---cEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCC
Q psy14331 113 DKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEK---KWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYN 189 (265)
Q Consensus 113 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 189 (265)
.++.||+....... ...++..|+.+. .|+.+.+.. .... .....++.|++..-.++ ..
T Consensus 290 ~g~~l~~~t~~~~~--------~~~l~~~d~~~~~~~~~~~l~~~~--~~~~--~~s~~g~~lv~~~~~~g-------~~ 350 (693)
T 3iuj_A 290 KGSTLYLLTNRDAP--------NRRLVTVDAANPGPAHWRDLIPER--QQVL--TVHSGSGYLFAEYMVDA-------TA 350 (693)
T ss_dssp ETTEEEEEECTTCT--------TCEEEEEETTSCCGGGCEEEECCC--SSCE--EEEEETTEEEEEEEETT-------EE
T ss_pred cCCEEEEEECCCCC--------CCEEEEEeCCCCCccccEEEecCC--CCEE--EEEEECCEEEEEEEECC-------ee
Confidence 37889888664321 357889998763 488775442 1221 44444666665443322 34
Q ss_pred ceEEEEcCCCceEEec
Q psy14331 190 DVHIFDLETYAWKKIE 205 (265)
Q Consensus 190 ~v~~y~~~~~~W~~~~ 205 (265)
.|+.+|+.....+.+.
T Consensus 351 ~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 351 RVEQFDYEGKRVREVA 366 (693)
T ss_dssp EEEEECTTSCEEEEEC
T ss_pred EEEEEECCCCeeEEee
Confidence 6888988866555554
No 221
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=37.48 E-value=2.2e+02 Score=25.33 Aligned_cols=63 Identities=11% Similarity=0.090 Sum_probs=40.5
Q ss_pred CCceeEEEcCCC--c-EEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCC--CceEEecc
Q psy14331 135 YKDLWVFRMGEK--K-WEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLET--YAWKKIEP 206 (265)
Q Consensus 135 ~~~~~~yd~~~~--~-W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~--~~W~~~~~ 206 (265)
.++++.+|..+. . |+.+.... ... ...+...++.||+....+.. ...|+.+|+.+ ..|+.+.+
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~--~~~-~~~~~~dg~~l~~~s~~~~~------~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDL--KAQ-WDFVDGVGDQLWFVSGDGAP------LKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSS--SSC-EEEEEEETTEEEEEECTTCT------TCEEEEEECSSSSCEEEEEEC
T ss_pred cceEEEEECCCCCCcccEEecCCC--Cce-EEEEeccCCEEEEEECCCCC------CCEEEEEeCCCCccccEEEec
Confidence 467999998877 6 88876432 122 11223457788887544222 35799999988 57988765
No 222
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=37.09 E-value=1.5e+02 Score=23.32 Aligned_cols=63 Identities=16% Similarity=0.188 Sum_probs=35.2
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..+|+.+.+....-.. .. ..-..+.. ++..++.|+.++ .+
T Consensus 209 ~g~~l~sgs~D-----------g~v~~wd~~~~~~~~~~~~---h~-~~v~~v~~~p~~~~l~s~s~D~---------~v 264 (354)
T 2pbi_B 209 TGNTFVSGGCD-----------KKAMVWDMRSGQCVQAFET---HE-SDVNSVRYYPSGDAFASGSDDA---------TC 264 (354)
T ss_dssp SCCEEEEEETT-----------SCEEEEETTTCCEEEEECC---CS-SCEEEEEECTTSSEEEEEETTS---------CE
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCcEEEEecC---CC-CCeEEEEEeCCCCEEEEEeCCC---------eE
Confidence 35677777653 4588899888765433211 11 11122222 456677776533 47
Q ss_pred EEEEcCCCc
Q psy14331 192 HIFDLETYA 200 (265)
Q Consensus 192 ~~y~~~~~~ 200 (265)
..||+.+.+
T Consensus 265 ~lwd~~~~~ 273 (354)
T 2pbi_B 265 RLYDLRADR 273 (354)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 788887754
No 223
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=36.75 E-value=1.7e+02 Score=23.69 Aligned_cols=94 Identities=10% Similarity=0.070 Sum_probs=45.7
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..+|+.+.+- +.... .....-..+.. ++..++.|+.+ ..+
T Consensus 161 ~~~~l~sgs~D-----------~~i~iwd~~~~~~--~~~~~--~h~~~V~~v~~~p~~~~l~s~s~D---------~~i 216 (410)
T 1vyh_C 161 SGKLLASCSAD-----------MTIKLWDFQGFEC--IRTMH--GHDHNVSSVSIMPNGDHIVSASRD---------KTI 216 (410)
T ss_dssp TSSEEEEEETT-----------SCCCEEETTSSCE--EECCC--CCSSCEEEEEECSSSSEEEEEETT---------SEE
T ss_pred CCCEEEEEeCC-----------CeEEEEeCCCCce--eEEEc--CCCCCEEEEEEeCCCCEEEEEeCC---------CeE
Confidence 56677777753 3466788766543 32221 11111122222 45566666653 357
Q ss_pred EEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 192 HIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 192 ~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..+|+.+..-...-. ........+....++.+++.|+.+.
T Consensus 217 ~~wd~~~~~~~~~~~----~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 217 KMWEVQTGYCVKTFT----GHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp EEEETTTCCEEEEEE----CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCCCcEEEEEe----CCCccEEEEEECCCCCEEEEEcCCC
Confidence 888887765322111 0111112233334567777776553
No 224
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=35.97 E-value=2.9e+02 Score=26.22 Aligned_cols=93 Identities=12% Similarity=0.056 Sum_probs=44.8
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE----CCEEEEEcCccCCCCccccCC
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL----KKHLVVFGGFHDNLREAKYYN 189 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~ 189 (265)
++.+++.|+.+ ..+.++|..+++....-.. .......+.. +..+++.|+.+ .
T Consensus 668 ~~~~l~s~~~d-----------~~v~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~l~sg~~d---------~ 723 (1249)
T 3sfz_A 668 DDSYIATCSAD-----------KKVKIWDSATGKLVHTYDE----HSEQVNCCHFTNKSNHLLLATGSND---------F 723 (1249)
T ss_dssp TSSEEEEEETT-----------SEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSCCEEEEEETT---------S
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCceEEEEcC----CCCcEEEEEEecCCCceEEEEEeCC---------C
Confidence 55666666632 4588899988764332211 1111122222 23455555542 3
Q ss_pred ceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 190 DVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 190 ~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
.+..+|+.+..-...-. .....-..+....++..++.|+.+
T Consensus 724 ~v~vwd~~~~~~~~~~~----~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMF----GHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp CEEEEETTSSSEEEEEC----CCSSCEEEEEECSSTTEEEEEESS
T ss_pred eEEEEECCCcchhheec----CCCCCEEEEEEecCCCEEEEEECC
Confidence 57888888765432221 111111233333455666666554
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=35.51 E-value=40 Score=27.81 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=46.1
Q ss_pred eEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCCCCccccceEEEecCCC-EEEEEcCcccCCCc
Q psy14331 53 FLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRCSHQMVALSADKG-QLWMFGGEFSSASE 129 (265)
Q Consensus 53 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~~~~~~~~~~~~~-~iyv~GG~~~~~~~ 129 (265)
+++.++++++|+.-+...++.. +.+-+.++.+|. .......+.+....++. +...++ .||+.-+.
T Consensus 285 ~a~~~~~~~lyV~~~~~~~~~h-----k~~~~~V~viD~~t~kv~~~i~vg~~~~~la-vs~D~~~~ly~tn~~------ 352 (386)
T 3sjl_D 285 VAYHRALDRIYLLVDQRDEWRH-----KTASRFVVVLDAKTGERLAKFEMGHEIDSIN-VSQDEKPLLYALSTG------ 352 (386)
T ss_dssp EEEETTTTEEEEEEEECCTTCT-----TSCEEEEEEEETTTCCEEEEEEEEEEECEEE-ECSSSSCEEEEEETT------
T ss_pred eeECCCCCeEEEEecccccccc-----CCCCCEEEEEECCCCeEEEEEECCCCcceEE-ECCCCCeEEEEEcCC------
Confidence 4455678999997442111111 122578999999 33333344444333443 333333 57776442
Q ss_pred cccccCCceeEEEcCCCcEEE
Q psy14331 130 SQFHHYKDLWVFRMGEKKWEK 150 (265)
Q Consensus 130 ~~~~~~~~~~~yd~~~~~W~~ 150 (265)
.+++.++|..+++-..
T Consensus 353 -----~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 353 -----DKTLYIHDAESGEELR 368 (386)
T ss_dssp -----TTEEEEEETTTCCEEE
T ss_pred -----CCeEEEEECCCCcEEE
Confidence 4679999999887443
No 226
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=35.50 E-value=1.7e+02 Score=23.32 Aligned_cols=135 Identities=11% Similarity=0.059 Sum_probs=72.1
Q ss_pred eeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCCCccccceEEEecCCCEEEEEcCccc
Q psy14331 52 SFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFS 125 (265)
Q Consensus 52 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~ 125 (265)
.+++.+.++.||+.-.. .+.++++++ ......+..| ..++++..++.||+.--..
T Consensus 120 glavd~~~g~ly~~d~~--------------~~~I~~~~~dG~~~~~l~~~~l~~P----~~iavdp~~g~ly~td~~~- 180 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSG--------------TSRIEVANLDGAHRKVLLWQSLEKP----RAIALHPMEGTIYWTDWGN- 180 (349)
T ss_dssp EEEEETTTTEEEEEETT--------------TTEEEEEETTSCSCEEEECTTCSCE----EEEEEETTTTEEEEEECSS-
T ss_pred EEEEecCCCeEEEEcCC--------------CCeEEEEcCCCCceEEEEeCCCCCc----ceEEEecCcCeEEEeccCC-
Confidence 45554457888886431 356777776 1111222222 3445655578999874211
Q ss_pred CCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEE
Q psy14331 126 SASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKK 203 (265)
Q Consensus 126 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~ 203 (265)
...++++++....-+.+.... -..-.+++.. ++.||+.-.. .+.|+++|+....-+.
T Consensus 181 ---------~~~I~r~~~dG~~~~~~~~~~---~~~PnGla~d~~~~~lY~aD~~---------~~~I~~~~~dG~~~~~ 239 (349)
T 3v64_C 181 ---------TPRIEASSMDGSGRRIIADTH---LFWPNGLTIDYAGRRMYWVDAK---------HHVIERANLDGSHRKA 239 (349)
T ss_dssp ---------SCEEEEEETTSCSCEESCCSS---CSCEEEEEEETTTTEEEEEETT---------TTEEEEEETTSCSCEE
T ss_pred ---------CCEEEEEeCCCCCcEEEEECC---CCCcceEEEeCCCCEEEEEECC---------CCEEEEEeCCCCceEE
Confidence 256999998765433332111 1111234443 6789997432 3679999987644333
Q ss_pred eccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 204 IEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 204 ~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
+.... +..+ .++++ .++.+|+.-
T Consensus 240 ~~~~~-~~~P---~giav-~~~~ly~td 262 (349)
T 3v64_C 240 VISQG-LPHP---FAITV-FEDSLYWTD 262 (349)
T ss_dssp EECSS-CSSE---EEEEE-ETTEEEEEE
T ss_pred EEeCC-CCCc---eEEEE-ECCEEEEec
Confidence 33211 1111 34444 478888874
No 227
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=34.69 E-value=1.6e+02 Score=22.84 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=28.3
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCC-CCceEEEeC--CCeEEEEcCccc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPR-SGCQMAATP--DGKILISGGYSK 235 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~-~~~~~~~~~--~~~iyi~GG~~~ 235 (265)
.+.+++.||.+ ..|..||..+..|+.+..... .... .-..+.... ++++++.||.+.
T Consensus 260 ~~~~l~s~~~d---------g~v~iw~~~~~~~~~~~~~~~-~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 260 FNGLIASVGAD---------GVLAVYEEVDGEWKVFAKRAL-CHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp TTSCEEEEETT---------SCEEEEEEETTEEEEEEEESC-TTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred CCCEEEEEeCC---------CEEEEEEcCCCceEEEecccc-ccccceEEEEEEecCCCceEEEEecCCC
Confidence 34456666643 357788888888876544210 1111 111222222 356777777653
No 228
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=34.65 E-value=1.9e+02 Score=23.65 Aligned_cols=18 Identities=17% Similarity=0.172 Sum_probs=14.3
Q ss_pred CCceEEEeCCCeEEEEcC
Q psy14331 215 SGCQMAATPDGKILISGG 232 (265)
Q Consensus 215 ~~~~~~~~~~~~iyi~GG 232 (265)
..|+++...++++|..|-
T Consensus 338 ~~hs~alt~~G~v~~wG~ 355 (406)
T 4d9s_A 338 WRHTLAVTERNNVFAWGR 355 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEecC
Confidence 457777777889999984
No 229
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=33.67 E-value=1e+02 Score=24.58 Aligned_cols=80 Identities=10% Similarity=0.154 Sum_probs=43.4
Q ss_pred eEEecCCCEEEEECcEE-eCCCceeeCCCcccCceEEEEe--eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCc
Q psy14331 53 FLAHPDKDQLILFGGEF-YDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASE 129 (265)
Q Consensus 53 ~~~~~~~~~lyv~GG~~-~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~ 129 (265)
+++.++++++|+..... ..+... ...+.++.+|. ......++.+. .++. .+...++.||+.++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~-----~~~~~v~viD~~t~~~v~~i~~~~-p~~i-a~spdg~~l~v~n~------- 324 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHK-----FPAAEIWVMDTKTKQRVARIPGRD-ALSM-TIDQQRNLMLTLDG------- 324 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTT-----CCCSEEEEEETTTTEEEEEEECTT-CCEE-EEETTTTEEEEECS-------
T ss_pred EEEecCCCeEEEEEccCCCccccc-----CCCceEEEEECCCCcEEEEEecCC-eeEE-EECCCCCEEEEeCC-------
Confidence 45556789999974310 011000 01468999998 33333334444 3333 44455667776653
Q ss_pred cccccCCceeEEEcCCCcEEEEe
Q psy14331 130 SQFHHYKDLWVFRMGEKKWEKIV 152 (265)
Q Consensus 130 ~~~~~~~~~~~yd~~~~~W~~~~ 152 (265)
+++.++|+.+++-+.+.
T Consensus 325 ------~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 325 ------GNVNVYDISQPEPKLLR 341 (361)
T ss_dssp ------SCEEEEECSSSSCEEEE
T ss_pred ------CeEEEEECCCCcceeeE
Confidence 34888898887334443
No 230
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=33.06 E-value=1.7e+02 Score=22.68 Aligned_cols=30 Identities=10% Similarity=0.173 Sum_probs=18.6
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecC
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCK 154 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 154 (265)
++.+++.|+.+ ..+..+|..++.|+.+...
T Consensus 164 ~~~~l~s~s~D-----------~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 164 SEALLASSSYD-----------DTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp SSSEEEEEETT-----------SCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCCeeEEEEc
Confidence 45666666643 3466777777777666544
No 231
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=32.40 E-value=1.7e+02 Score=22.46 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=35.4
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCc--EEEEecCCCCCCCcCceEEE-----ECCEEEEEcCccCCCCccc
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKK--WEKIVCKDTPPSRSGHRMIA-----LKKHLVVFGGFHDNLREAK 186 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~p~~~~~~~~~~-----~~~~iyv~GG~~~~~~~~~ 186 (265)
++.+++.|+.+ ..+..+|+.+.. ...+........+...+++. -++.+++.|+.+
T Consensus 128 ~~~~l~~~~~d-----------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d------- 189 (357)
T 3i2n_A 128 GAPEIVTGSRD-----------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN------- 189 (357)
T ss_dssp CCCEEEEEETT-----------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-------
T ss_pred CccEEEEEeCC-----------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-------
Confidence 45566666642 457788887754 33333221111112222221 255666666542
Q ss_pred cCCceEEEEcCCCceE
Q psy14331 187 YYNDVHIFDLETYAWK 202 (265)
Q Consensus 187 ~~~~v~~y~~~~~~W~ 202 (265)
..+..||+.+.+-.
T Consensus 190 --~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 190 --GDIKLFDLRNMALR 203 (357)
T ss_dssp --SEEEEEETTTTEEE
T ss_pred --CeEEEEECccCcee
Confidence 45788888876543
No 232
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=31.82 E-value=2e+02 Score=23.12 Aligned_cols=61 Identities=11% Similarity=0.110 Sum_probs=34.4
Q ss_pred eeEEEcCC--CcEEEEecCCCCCCCcCceEEEE---CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEecc
Q psy14331 138 LWVFRMGE--KKWEKIVCKDTPPSRSGHRMIAL---KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206 (265)
Q Consensus 138 ~~~yd~~~--~~W~~~~~~~~p~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~ 206 (265)
++.++... .+|+...... ....-++++.. .+.||+.+..... -..|++.+-...+|+.+..
T Consensus 33 l~~~~~~~~g~~W~~~~~~~--~~~~v~~i~~dp~~~~~l~~g~~~g~~------g~gl~~s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVF--LGHTIHHIVQDPREPERMLMAARTGHL------GPTVFRSDDGGGNWTEATR 98 (394)
T ss_dssp EEEEEECTTSCSEEEEEEES--TTSEEEEEEECSSSTTCEEEEEEC--C------CEEEEEESSTTSCCEECSB
T ss_pred eEEEECCCCCCCceECCccC--CCCceEEEEECCCCCCeEEEEecCCCC------CccEEEeCCCCCCceECCc
Confidence 66776654 6899874221 22223344443 4578875532110 1247777767789998875
No 233
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=31.68 E-value=2e+02 Score=22.94 Aligned_cols=23 Identities=9% Similarity=0.140 Sum_probs=15.3
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYA 200 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~ 200 (265)
++.+++.|+.+ ..+..||+.+.+
T Consensus 258 ~~~~l~~~~~d---------g~i~i~d~~~~~ 280 (420)
T 3vl1_A 258 YGKYVIAGHVS---------GVITVHNVFSKE 280 (420)
T ss_dssp TTEEEEEEETT---------SCEEEEETTTCC
T ss_pred CCCEEEEEcCC---------CeEEEEECCCCc
Confidence 45666666643 358889987765
No 234
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=31.29 E-value=2.1e+02 Score=23.20 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=14.4
Q ss_pred CCceEEEeCCCeEEEEcCc
Q psy14331 215 SGCQMAATPDGKILISGGY 233 (265)
Q Consensus 215 ~~~~~~~~~~~~iyi~GG~ 233 (265)
..|+++...++++|..|-.
T Consensus 326 ~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 326 SLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp SSEEEEEETTCCEEEEECC
T ss_pred cCeEEEECCCCCEEEeeCC
Confidence 4477777778899999854
No 235
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=31.28 E-value=3.1e+02 Score=25.07 Aligned_cols=60 Identities=7% Similarity=0.119 Sum_probs=35.4
Q ss_pred cceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEc
Q psy14331 105 HQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFG 176 (265)
Q Consensus 105 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~G 176 (265)
...++++..+++||+.=.. .+.|+++++....=+.+..... .-....++++.++.||+.-
T Consensus 560 P~GLavD~~~~~LYwaD~~-----------~~~I~~~d~dG~~~~~v~~~~~-~l~~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSK-----------LHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTD 619 (791)
T ss_dssp EEEEEEETTTTEEEEEETT-----------TTEEEEEETTSCSCEEEEECTT-TTSSEEEEEEETTEEEEEE
T ss_pred ceEEEEecCCCeEEEEeCC-----------CCcEEEEecCCCceEEEecCCC-ccCCCCEEEEeCCEEEEEE
Confidence 3445666567899998321 4679999987654333332210 1112235666788888865
No 236
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=31.08 E-value=2e+02 Score=22.85 Aligned_cols=86 Identities=13% Similarity=0.210 Sum_probs=42.0
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCc-eEEEE---CCEEEEEcCccCCCCccccCCceEEEEcCCC--ceEEeccCCC
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGH-RMIAL---KKHLVVFGGFHDNLREAKYYNDVHIFDLETY--AWKKIEPLGA 209 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~-~~~~~---~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~--~W~~~~~~~~ 209 (265)
..+..+|+.+++-...-....+...... ..... ++.+++.|+.++ .|..+|+... .-..+...
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~---------~v~~wd~~~~~~~~~~~~~h-- 248 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT---------TVRLWDLRITSRAVRTYHGH-- 248 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS---------CEEEEETTTTCCCCEEECCC--
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC---------eEEEEECCCCCcceEEECCc--
Confidence 3477889888765433221111111111 11222 557778787643 4777887532 22222211
Q ss_pred CCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 210 GPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 210 ~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
...-.++....+++.++.|+.+.
T Consensus 249 ---~~~v~~v~~~p~~~~l~s~s~D~ 271 (380)
T 3iz6_a 249 ---EGDINSVKFFPDGQRFGTGSDDG 271 (380)
T ss_dssp ---SSCCCEEEECTTSSEEEEECSSS
T ss_pred ---CCCeEEEEEecCCCeEEEEcCCC
Confidence 11123344444667777777654
No 237
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=30.73 E-value=53 Score=27.08 Aligned_cols=103 Identities=11% Similarity=-0.019 Sum_probs=56.6
Q ss_pred HHHHhhcccceEEEeccCCCCCCCceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe-------eecCCC-
Q psy14331 26 DIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL-------FVSAPG- 97 (265)
Q Consensus 26 ~~~~~d~~~~~w~~~~~~~p~~r~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~-------w~~~~~- 97 (265)
.+..+|..+.+-...+ |.....| +++-|++..+|+.......+..... .+.+.++|. ....+.
T Consensus 60 ~V~ViD~~t~~v~~~I---~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~-----~~~VsviD~~t~~v~~~I~v~~g 130 (386)
T 3sjl_D 60 QQFVIDGEAGRVIGMI---DGGFLPN-PVVADDGSFIAHASTVFSRIARGER-----TDYVEVFDPVTLLPTADIELPDA 130 (386)
T ss_dssp EEEEEETTTTEEEEEE---EECSSCE-EEECTTSSCEEEEEEEEEETTEEEE-----EEEEEEECTTTCCEEEEEEETTC
T ss_pred EEEEEECCCCeEEEEE---ECCCCCc-EEECCCCCEEEEEcccccccccCCC-----CCEEEEEECCCCeEEEEEECCCc
Confidence 5777888887764322 2233335 7777889999998643221111111 356888888 112211
Q ss_pred --CCCCccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcE
Q psy14331 98 --APPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW 148 (265)
Q Consensus 98 --~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W 148 (265)
.......+.. .+...++++|+..... .+.+.+.|+.+++-
T Consensus 131 ~r~~~g~~P~~~-a~spDGk~lyVan~~~----------~~~VsVID~~t~~v 172 (386)
T 3sjl_D 131 PRFLVGTYPWMT-SLTPDGKTLLFYQFSP----------APAVGVVDLEGKAF 172 (386)
T ss_dssp CCCCBSCCGGGE-EECTTSSEEEEEECSS----------SCEEEEEETTTTEE
T ss_pred cccccCCCCceE-EEcCCCCEEEEEEcCC----------CCeEEEEECCCCcE
Confidence 0011233333 3445567888874311 35688888888753
No 238
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=30.69 E-value=2.1e+02 Score=22.90 Aligned_cols=53 Identities=9% Similarity=0.177 Sum_probs=29.1
Q ss_pred CceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCce
Q psy14331 136 KDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAW 201 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W 201 (265)
..+..+|+.+++....-... .. ..+++.. ++.+++.|+.+ ..+..||+.+..-
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~--~~--v~~~~~~~~~~~~l~~~s~d---------~~v~iwd~~~~~~ 241 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSIE--DG--VTTVAVSPGDGKYIAAGSLD---------RAVRVWDSETGFL 241 (393)
T ss_dssp SEEEEEETTTTEEEEEEECS--SC--EEEEEECSTTCCEEEEEETT---------SCEEEEETTTCCE
T ss_pred CcEEEEECCCCeeEEEEEcC--CC--cEEEEEECCCCCEEEEEcCC---------CcEEEEECCCCcE
Confidence 45778898887654332211 11 1122222 45677777653 3477888877653
No 239
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=29.29 E-value=2.3e+02 Score=23.07 Aligned_cols=142 Identities=12% Similarity=0.106 Sum_probs=70.4
Q ss_pred eeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCccccceEEEecCCCEEEEEcCcccC
Q psy14331 51 FSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSS 126 (265)
Q Consensus 51 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~ 126 (265)
+.+++. .++.||+.... -..+.++|+ -...... ....+ +.+...++.||+.....
T Consensus 134 ~~la~d-~~g~lyv~d~~--------------~~~I~~id~~~g~~~~~~~~--~~~~~--ia~~~~g~~l~~~d~~~-- 192 (409)
T 3hrp_A 134 WGIAAV-GNNTVLAYQRD--------------DPRVRLISVDDNKVTTVHPG--FKGGK--PAVTKDKQRVYSIGWEG-- 192 (409)
T ss_dssp EEEEEC-STTEEEEEETT--------------TTEEEEEETTTTEEEEEEET--CCBCB--CEECTTSSEEEEEBSST--
T ss_pred eEEEEe-CCCCEEEEecC--------------CCcEEEEECCCCEEEEeecc--CCCCc--eeEecCCCcEEEEecCC--
Confidence 344444 45678887541 256778887 1111111 11223 33444456677765421
Q ss_pred CCccccccCCceeEEEcCCCc-EEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceEE
Q psy14331 127 ASESQFHHYKDLWVFRMGEKK-WEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKK 203 (265)
Q Consensus 127 ~~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~ 203 (265)
...++++++.++. ...+.....+....-++++.. ++.||+... ...|++||+.+.....
T Consensus 193 --------~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~----------~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 193 --------THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS----------NKNFGRFNVKTQEVTL 254 (409)
T ss_dssp --------TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT----------TCEEEEEETTTCCEEE
T ss_pred --------CceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC----------CCcEEEEECCCCCEEE
Confidence 1268899987543 233321111011222334333 578998432 2469999999877655
Q ss_pred eccCCCCCCCCCC-c-eEEEeC-CCeEEEEc
Q psy14331 204 IEPLGAGPAPRSG-C-QMAATP-DGKILISG 231 (265)
Q Consensus 204 ~~~~~~~p~~~~~-~-~~~~~~-~~~iyi~G 231 (265)
+...+........ . .++.-. ++.||+..
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 5321111111222 1 444444 57888874
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=28.79 E-value=2e+02 Score=22.17 Aligned_cols=75 Identities=13% Similarity=0.013 Sum_probs=36.2
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++.|||.......... .......+.+||+....-..+............+++..++.|||-.-. .+.|.+
T Consensus 239 ~G~l~va~~~~~~~~~-~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~---------~~~i~~ 308 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNM-HGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF---------HGSVGI 308 (322)
T ss_dssp TSCEEEEEEEETTSST-TSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS---------CSEEEE
T ss_pred CCCEEEEecCcccccc-cCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC---------CCceEE
Confidence 5678887543111000 000024588999865544444322110112222344457899986532 356778
Q ss_pred EEcCC
Q psy14331 194 FDLET 198 (265)
Q Consensus 194 y~~~~ 198 (265)
|++..
T Consensus 309 ~~~~~ 313 (322)
T 2fp8_A 309 LVYDK 313 (322)
T ss_dssp EEC--
T ss_pred Eeccc
Confidence 87653
No 241
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=27.47 E-value=85 Score=26.42 Aligned_cols=18 Identities=17% Similarity=0.340 Sum_probs=14.2
Q ss_pred CCceEEEeCCCeEEEEcC
Q psy14331 215 SGCQMAATPDGKILISGG 232 (265)
Q Consensus 215 ~~~~~~~~~~~~iyi~GG 232 (265)
..|+++...++++|.+|-
T Consensus 322 ~~hs~~lt~~G~v~~wG~ 339 (473)
T 3of7_A 322 EHHSLILSQDGDLYSCGR 339 (473)
T ss_dssp SSEEEEEETTSCEEEEEE
T ss_pred CCeEEEEeCCCeEEEEEC
Confidence 457777777889999984
No 242
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=27.11 E-value=2.1e+02 Score=21.73 Aligned_cols=143 Identities=13% Similarity=0.080 Sum_probs=67.1
Q ss_pred HHHhhcccceEEEeccCCCCCC-CceeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------e-ecCCCC
Q psy14331 27 IEAEEKRKNKVIEKVVPEPTRR-ANFSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------F-VSAPGA 98 (265)
Q Consensus 27 ~~~~d~~~~~w~~~~~~~p~~r-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w-~~~~~~ 98 (265)
+..+|..+.+..... ..+... ..+.+++.++++.+|+.+.. ...++.+|+ . ...+.
T Consensus 13 v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~v~~~~--------------~~~v~~~d~~~~~~~~~~~~~~- 76 (337)
T 1pby_B 13 LVVIDTEKMAVDKVI-TIADAGPTPMVPMVAPGGRIAYATVNK--------------SESLVKIDLVTGETLGRIDLST- 76 (337)
T ss_dssp EEEEETTTTEEEEEE-ECTTCTTCCCCEEECTTSSEEEEEETT--------------TTEEEEEETTTCCEEEEEECCB-
T ss_pred EEEEECCCCcEEEEE-EcCCCCCCccceEEcCCCCEEEEEeCC--------------CCeEEEEECCCCCeEeeEEcCC-
Confidence 556677666553312 122211 12445565567788887651 246788887 1 11111
Q ss_pred CC--CccccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CC-EEEE
Q psy14331 99 PP--PRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KK-HLVV 174 (265)
Q Consensus 99 p~--~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~-~iyv 174 (265)
+. ....+ .+.+...++.||+................+.+.++|+.+.+....-... .....++.. ++ .+|+
T Consensus 77 ~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~ 151 (337)
T 1pby_B 77 PEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP----RQITMLAWARDGSKLYG 151 (337)
T ss_dssp TTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC----SSCCCEEECTTSSCEEE
T ss_pred ccccccccc-ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC----CCcceeEECCCCCEEEE
Confidence 00 00112 2334444457777642110000000001367999999887654332221 111223332 33 4666
Q ss_pred EcCccCCCCccccCCceEEEEcCCCceE
Q psy14331 175 FGGFHDNLREAKYYNDVHIFDLETYAWK 202 (265)
Q Consensus 175 ~GG~~~~~~~~~~~~~v~~y~~~~~~W~ 202 (265)
.. ..++.+|+.+.+-.
T Consensus 152 ~~------------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 152 LG------------RDLHVMDPEAGTLV 167 (337)
T ss_dssp ES------------SSEEEEETTTTEEE
T ss_pred eC------------CeEEEEECCCCcEe
Confidence 52 35888998876644
No 243
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=26.30 E-value=2.2e+02 Score=21.69 Aligned_cols=53 Identities=19% Similarity=0.179 Sum_probs=26.0
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCceE-EeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWK-KIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~-~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
++.+++.|+.+ ..|..+|+.+.+-. .+.. ....-..++...++.+++.|+.+.
T Consensus 197 ~~~~l~s~s~D---------~~i~iWd~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 197 DKPYMITASDD---------LTIKIWDYQTKSCVATLEG-----HMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp TCCEEEEEETT---------SEEEEEETTTTEEEEEEEC-----CSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCEEEEEcCC---------CeEEEEeCCCCccceeeCC-----CCCCEEEEEECCCCCEEEEEcCCC
Confidence 34556666543 35778888775422 2221 111112233344556777776653
No 244
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=25.85 E-value=2.7e+02 Score=22.61 Aligned_cols=63 Identities=6% Similarity=0.104 Sum_probs=35.5
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
++..++.|+.+ ..+..||..+++-.. ... ...........++..++.|+.+ ..+..
T Consensus 321 ~~~~l~sg~~d-----------g~i~vwd~~~~~~~~--~~~--~h~~~v~~~~~~~~~l~s~s~d---------g~v~v 376 (464)
T 3v7d_B 321 ERKRCISASMD-----------TTIRIWDLENGELMY--TLQ--GHTALVGLLRLSDKFLVSAAAD---------GSIRG 376 (464)
T ss_dssp TTTEEEEEETT-----------SCEEEEETTTTEEEE--EEC--CCSSCEEEEEECSSEEEEEETT---------SEEEE
T ss_pred CCCEEEEEeCC-----------CcEEEEECCCCcEEE--EEe--CCCCcEEEEEEcCCEEEEEeCC---------CcEEE
Confidence 45566666642 458899988775322 221 1111223344456666666653 35788
Q ss_pred EEcCCCc
Q psy14331 194 FDLETYA 200 (265)
Q Consensus 194 y~~~~~~ 200 (265)
||+.+..
T Consensus 377 wd~~~~~ 383 (464)
T 3v7d_B 377 WDANDYS 383 (464)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 8988755
No 245
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=25.78 E-value=2.5e+02 Score=25.35 Aligned_cols=96 Identities=13% Similarity=0.068 Sum_probs=47.4
Q ss_pred cceEEEeccCCC---CCCCceeeEEec-CCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCcc--
Q psy14331 34 KNKVIEKVVPEP---TRRANFSFLAHP-DKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPRC-- 103 (265)
Q Consensus 34 ~~~w~~~~~~~p---~~r~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r~-- 103 (265)
-.+|......+| ... .. +.+.+ ..+.||+.+. -..+++-+- |+++..+|....
T Consensus 618 G~tW~~~~~~lp~~~~~~-~~-i~~~~~~~~~l~~~~~---------------~~~l~~S~D~G~tW~~~~~~~~~~~~~ 680 (763)
T 3a0f_A 618 GKSYTKKGNGLPCCWTYT-GT-PVTSNLRAGELWVSVK---------------GVGIYHSTDFGNTFTALAGSGSSLNPA 680 (763)
T ss_dssp TSBCEEECBTSCCSSCCC-EE-EEECSSSTTCEEEEET---------------TTEEEEESSTTSBCEECTTBTTTBEEE
T ss_pred CcCccccccCCCcccCcc-cc-EEECCCCCCcEEEEcC---------------CCeEEEEcCCCCCceEccCCCcccccc
Confidence 457877544455 221 11 33333 4567887654 234555433 888876554321
Q ss_pred --ccceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEec
Q psy14331 104 --SHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVC 153 (265)
Q Consensus 104 --~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 153 (265)
....+......+.||++|-. ... ....+++-+-...+|+++..
T Consensus 681 ~~~~g~~~~~~~~~~l~~~G~~-~~~------~~~gl~~S~D~G~tW~~~~~ 725 (763)
T 3a0f_A 681 VFSIGAPQTPNATETLFLWGIP-SAS------QPEGLYMSTDNGGLWTRLND 725 (763)
T ss_dssp EEEEECCSSTTSSCEEEEEEEC-STT------SCSEEEEESSTTSCCEECSC
T ss_pred eeEEeeecCCCCCceEEEEEEc-ccC------CCcEEEEeCCCCCCcEeccC
Confidence 11111111123579998710 000 02345555555678999863
No 246
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=25.45 E-value=62 Score=27.06 Aligned_cols=80 Identities=10% Similarity=0.057 Sum_probs=47.4
Q ss_pred eEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe--eecCCCCCCCccccceEEEecCCC-EEEEEcCcccCCCc
Q psy14331 53 FLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL--FVSAPGAPPPRCSHQMVALSADKG-QLWMFGGEFSSASE 129 (265)
Q Consensus 53 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~--w~~~~~~p~~r~~~~~~~~~~~~~-~iyv~GG~~~~~~~ 129 (265)
+++.++++++|+.-.....+.. +...+++.++|. ......++.+...+...+. ..++ .+|+....
T Consensus 324 va~s~dg~rlyVa~~~~~~gth-----k~~s~~VsVID~~T~kvv~~I~vg~~P~gia~s-pDg~~~lyv~n~~------ 391 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKH-----KAASRFVVVLNAETGERINKIELGHEIDSINVS-QDAEPLLYALSAG------ 391 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCT-----TSCEEEEEEEETTTCCEEEEEEEEEEECEEEEC-CSSSCEEEEEETT------
T ss_pred eEEcCCCCEEEEEecccccccc-----cCCCCEEEEEECCCCeEEEEEECCCCcCeEEEc-cCCCEEEEEEcCC------
Confidence 4566678999998541111110 001468999999 4444455555555555443 3345 67776542
Q ss_pred cccccCCceeEEEcCCCcEE
Q psy14331 130 SQFHHYKDLWVFRMGEKKWE 149 (265)
Q Consensus 130 ~~~~~~~~~~~yd~~~~~W~ 149 (265)
.+++.++|+.+.+-.
T Consensus 392 -----s~~VsVID~~t~kvv 406 (426)
T 3c75_H 392 -----TQTLHIYDAATGEEL 406 (426)
T ss_dssp -----TTEEEEEETTTCCEE
T ss_pred -----CCeEEEEECCCCCEE
Confidence 467999999887644
No 247
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=25.01 E-value=4.5e+02 Score=24.93 Aligned_cols=93 Identities=11% Similarity=0.060 Sum_probs=45.8
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHI 193 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~ 193 (265)
+++.++.|+.+ ..+..+|..+++....... ...-.++....+..++.++.+ ..+..
T Consensus 1014 dg~~l~s~~~d-----------g~i~vwd~~~~~~~~~~~~----~~~v~~~~~~~~~~l~~~~~d---------g~v~v 1069 (1249)
T 3sfz_A 1014 DGKTLISSSED-----------SVIQVWNWQTGDYVFLQAH----QETVKDFRLLQDSRLLSWSFD---------GTVKV 1069 (1249)
T ss_dssp SSSCEEEECSS-----------SBEEEEETTTTEEECCBCC----SSCEEEEEECSSSEEEEEESS---------SEEEE
T ss_pred CCCEEEEEcCC-----------CEEEEEECCCCceEEEecC----CCcEEEEEEcCCCcEEEEECC---------CcEEE
Confidence 55666666642 4588899988876533211 111112223333334455442 45788
Q ss_pred EEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCcc
Q psy14331 194 FDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYS 234 (265)
Q Consensus 194 y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~ 234 (265)
+|+.+.+-...-.. .... -.+++...+++.++.|+.+
T Consensus 1070 wd~~~~~~~~~~~~---~~~~-v~~~~~s~d~~~l~s~s~d 1106 (1249)
T 3sfz_A 1070 WNVITGRIERDFTC---HQGT-VLSCAISSDATKFSSTSAD 1106 (1249)
T ss_dssp EETTTTCCCEEEEC---CSSC-CCCEEECSSSSSCEEECCS
T ss_pred EECCCCceeEEEcc---cCCc-EEEEEECCCCCEEEEEcCC
Confidence 88877653322111 1111 1233334456666666654
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=24.70 E-value=2.5e+02 Score=21.83 Aligned_cols=113 Identities=8% Similarity=0.023 Sum_probs=59.9
Q ss_pred eeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eecCCCCCCCccccceEEEecCCCEEEEEcCcccCC
Q psy14331 52 SFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSA 127 (265)
Q Consensus 52 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~ 127 (265)
.+++.|.++.||+..- +. ...++++++ -..... ........+.++..+++||+.-..
T Consensus 124 ~iavdp~~g~ly~~d~----~~---------~~~I~~~~~dG~~~~~~~~--~~~~~P~gla~d~~~~~lY~~D~~---- 184 (316)
T 1ijq_A 124 AIVVDPVHGFMYWTDW----GT---------PAKIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSK---- 184 (316)
T ss_dssp EEEEETTTTEEEEEEC----SS---------SCEEEEEETTSCCEEEEEC--SSCSCEEEEEEETTTTEEEEEETT----
T ss_pred eEEeCCCCCEEEEEcc----CC---------CCeEEEEcCCCCCeEEEEE--CCCCCceEEEEeccCCEEEEEECC----
Confidence 4455555677777532 11 246777776 111100 111222344455457899988432
Q ss_pred CccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCccccCCceEEEEcCCCc
Q psy14331 128 SESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYA 200 (265)
Q Consensus 128 ~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~ 200 (265)
.+.++++|+....-+.+.... .....-.++++.++.+|+.--. .+.|.++|+.+.+
T Consensus 185 -------~~~I~~~d~dg~~~~~~~~~~-~~~~~P~giav~~~~ly~~d~~---------~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 185 -------LHSISSIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDII---------NEAIFSANRLTGS 240 (316)
T ss_dssp -------TTEEEEEETTSCSCEEEEECT-TTTSSEEEEEEETTEEEEEETT---------TTEEEEEETTTCC
T ss_pred -------CCeEEEEecCCCceEEEeecC-CccCCcEEEEEECCEEEEEECC---------CCeEEEEeCCCCc
Confidence 467999998754433333221 0112224566668889986522 3567888876543
No 249
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=23.64 E-value=3e+02 Score=22.38 Aligned_cols=99 Identities=8% Similarity=-0.012 Sum_probs=54.3
Q ss_pred eEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCc
Q psy14331 107 MVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLRE 184 (265)
Q Consensus 107 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~ 184 (265)
.++++..++.||+.--.. ...++++++....=+.+....+ ..-.++++. ++.||+.-..
T Consensus 206 ~iavdp~~g~ly~td~~~----------~~~I~~~~~dG~~~~~~~~~~l---~~P~glavd~~~~~lY~aD~~------ 266 (400)
T 3p5b_L 206 AIVVDPVHGFMYWTDWGT----------PAKIKKGGLNGVDIYSLVTENI---QWPNGITLDLLSGRLYWVDSK------ 266 (400)
T ss_dssp EEEEETTTTEEEEEECSS----------SCCEEEEETTSCSCEEEECSSC---SCEEEEEEETTTTEEEEEETT------
T ss_pred eEEEecccCeEEEEeCCC----------CCEEEEEeCCCCccEEEEECCC---CceEEEEEEeCCCEEEEEECC------
Confidence 455655578899864110 2568899887654333322211 111234444 6789997432
Q ss_pred cccCCceEEEEcCCCceEEeccC-CCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 185 AKYYNDVHIFDLETYAWKKIEPL-GAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 185 ~~~~~~v~~y~~~~~~W~~~~~~-~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
.+.|+++|+....-+.+... ..++. -.++++ .++.||+.-
T Consensus 267 ---~~~I~~~d~dG~~~~~~~~~~~~l~~---P~gl~v-~~~~lywtd 307 (400)
T 3p5b_L 267 ---LHSISSIDVNGGNRKTILEDEKRLAH---PFSLAV-FEDKVFWTD 307 (400)
T ss_dssp ---TTEEEEEETTSCCCEEEEECSSTTSS---EEEEEE-ETTEEEEEE
T ss_pred ---CCEEEEEeCCCCccEEEEeCCCCCCC---CEEEEE-eCCEEEEec
Confidence 46799999886544444331 11222 234444 478888875
No 250
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=23.43 E-value=2.6e+02 Score=21.65 Aligned_cols=95 Identities=12% Similarity=0.151 Sum_probs=47.7
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCce
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDV 191 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v 191 (265)
++.+++.|+.+ ..+..+|+.+++-...-.. +........+.. ++.+++.|+.+ ..|
T Consensus 237 ~~~~l~s~s~d-----------~~v~iwd~~~~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~~g~~d---------~~i 294 (340)
T 1got_B 237 NGNAFATGSDD-----------ATCRLFDLRADQELMTYSH--DNIICGITSVSFSKSGRLLLAGYDD---------FNC 294 (340)
T ss_dssp TSSEEEEEETT-----------SCEEEEETTTTEEEEEECC--TTCCSCEEEEEECTTSSEEEEEETT---------SEE
T ss_pred CCCEEEEEcCC-----------CcEEEEECCCCcEEEEEcc--CCcccceEEEEECCCCCEEEEECCC---------CeE
Confidence 56677777642 3477889877653222111 111112222222 56677777643 357
Q ss_pred EEEEcCCCce-EEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 192 HIFDLETYAW-KKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 192 ~~y~~~~~~W-~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
..||..+..- ..+.. ....-..+....++..++.|+.+.
T Consensus 295 ~vwd~~~~~~~~~~~~-----h~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 295 NVWDALKADRAGVLAG-----HDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EEEETTTCCEEEEEEC-----CSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEcccCcEeeEeec-----CCCcEEEEEEcCCCCEEEEEcCCc
Confidence 8888776442 22221 111122333444667777777653
No 251
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=23.03 E-value=2.7e+02 Score=21.76 Aligned_cols=59 Identities=5% Similarity=0.060 Sum_probs=29.3
Q ss_pred CceeEEEcCCCcEEEEecCC-CC-CCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCc
Q psy14331 136 KDLWVFRMGEKKWEKIVCKD-TP-PSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYA 200 (265)
Q Consensus 136 ~~~~~yd~~~~~W~~~~~~~-~p-~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~ 200 (265)
..+..||+.+.+-...-... .. ........... ++.+++.|+.+.. ...|..||+.+.+
T Consensus 207 g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~------~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS------FGCITLYETEFGE 269 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT------EEEEEEEETTTCC
T ss_pred CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC------CceEEEEECCCCc
Confidence 45889998876543221110 00 00111122222 5566677765311 1468889987754
No 252
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=22.62 E-value=2.7e+02 Score=21.57 Aligned_cols=138 Identities=7% Similarity=-0.004 Sum_probs=72.5
Q ss_pred eeeEEecCCCEEEEECcEEeCCCceeeCCCcccCceEEEEe----eec--CCCCCCCccccceEEEecCCCEEEEEcCcc
Q psy14331 51 FSFLAHPDKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL----FVS--APGAPPPRCSHQMVALSADKGQLWMFGGEF 124 (265)
Q Consensus 51 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~----w~~--~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~ 124 (265)
..+++.+.++.||+.-. . .+.+.++|+ -.. ...+..| ..+.++..++.||+..-..
T Consensus 80 ~glavd~~~~~ly~~d~-----~---------~~~I~~~~~~g~~~~~~~~~~~~~P----~~iavdp~~g~ly~~d~~~ 141 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDS-----V---------LGTVSVADTKGVKRKTLFRENGSKP----RAIVVDPVHGFMYWTDWGT 141 (316)
T ss_dssp CEEEEETTTTEEEEEET-----T---------TTEEEEEETTSSSEEEEEECTTCCE----EEEEEETTTTEEEEEECSS
T ss_pred CEEEEeecCCeEEEEEC-----C---------CCEEEEEeCCCCceEEEEECCCCCc----ceEEeCCCCCEEEEEccCC
Confidence 44555445788888632 1 356777776 111 1122222 3444555578999874210
Q ss_pred cCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE--CCEEEEEcCccCCCCccccCCceEEEEcCCCceE
Q psy14331 125 SSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL--KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWK 202 (265)
Q Consensus 125 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~ 202 (265)
...++++++....-+.+.... -..-.+++.. ++.||+.-.. .+.|+++|+....-+
T Consensus 142 ----------~~~I~~~~~dG~~~~~~~~~~---~~~P~gla~d~~~~~lY~~D~~---------~~~I~~~d~dg~~~~ 199 (316)
T 1ijq_A 142 ----------PAKIKKGGLNGVDIYSLVTEN---IQWPNGITLDLLSGRLYWVDSK---------LHSISSIDVNGGNRK 199 (316)
T ss_dssp ----------SCEEEEEETTSCCEEEEECSS---CSCEEEEEEETTTTEEEEEETT---------TTEEEEEETTSCSCE
T ss_pred ----------CCeEEEEcCCCCCeEEEEECC---CCCceEEEEeccCCEEEEEECC---------CCeEEEEecCCCceE
Confidence 256899998655433332221 1122244444 6789987532 467999998765444
Q ss_pred EeccCCCCCCCCCCceEEEeCCCeEEEEc
Q psy14331 203 KIEPLGAGPAPRSGCQMAATPDGKILISG 231 (265)
Q Consensus 203 ~~~~~~~~p~~~~~~~~~~~~~~~iyi~G 231 (265)
.+.... .....-.++++. ++.+|+.-
T Consensus 200 ~~~~~~--~~~~~P~giav~-~~~ly~~d 225 (316)
T 1ijq_A 200 TILEDE--KRLAHPFSLAVF-EDKVFWTD 225 (316)
T ss_dssp EEEECT--TTTSSEEEEEEE-TTEEEEEE
T ss_pred EEeecC--CccCCcEEEEEE-CCEEEEEE
Confidence 443321 011111344443 67888765
No 253
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=21.73 E-value=2.8e+02 Score=21.42 Aligned_cols=66 Identities=3% Similarity=0.003 Sum_probs=38.0
Q ss_pred CCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEE-CCEEEEEcCccCCCCccccCCceE
Q psy14331 114 KGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIAL-KKHLVVFGGFHDNLREAKYYNDVH 192 (265)
Q Consensus 114 ~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~v~ 192 (265)
++.+++.|+.+ ..+..+|+.+++-....... ......+++.. ++.+++.|+.+ ..|.
T Consensus 138 ~~~~l~s~s~d-----------g~i~~wd~~~~~~~~~~~~~--~~~~i~~~~~~pdg~~lasg~~d---------g~i~ 195 (343)
T 3lrv_A 138 NTEYFIWADNR-----------GTIGFQSYEDDSQYIVHSAK--SDVEYSSGVLHKDSLLLALYSPD---------GILD 195 (343)
T ss_dssp -CCEEEEEETT-----------CCEEEEESSSSCEEEEECCC--SSCCCCEEEECTTSCEEEEECTT---------SCEE
T ss_pred CCCEEEEEeCC-----------CcEEEEECCCCcEEEEEecC--CCCceEEEEECCCCCEEEEEcCC---------CEEE
Confidence 45566666642 45889999887764443221 11112223222 56777777753 3588
Q ss_pred EEEcCCCce
Q psy14331 193 IFDLETYAW 201 (265)
Q Consensus 193 ~y~~~~~~W 201 (265)
.||+.+.+-
T Consensus 196 iwd~~~~~~ 204 (343)
T 3lrv_A 196 VYNLSSPDQ 204 (343)
T ss_dssp EEESSCTTS
T ss_pred EEECCCCCC
Confidence 899887653
No 254
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=21.10 E-value=2.9e+02 Score=21.33 Aligned_cols=55 Identities=5% Similarity=-0.038 Sum_probs=30.9
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEEcCCCceEEeccCCCCCCCCCCceEEEeCCCeEEEEcCccc
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyi~GG~~~ 235 (265)
++.+++.|+.+ ..+..||+.+.+-...... .....-..+....++.+++.|+.+.
T Consensus 138 ~~~~l~s~s~d---------g~i~~wd~~~~~~~~~~~~---~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 138 NTEYFIWADNR---------GTIGFQSYEDDSQYIVHSA---KSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp -CCEEEEEETT---------CCEEEEESSSSCEEEEECC---CSSCCCCEEEECTTSCEEEEECTTS
T ss_pred CCCEEEEEeCC---------CcEEEEECCCCcEEEEEec---CCCCceEEEEECCCCCEEEEEcCCC
Confidence 34566667653 3588899988766444321 1111223444445677888877654
No 255
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=20.95 E-value=2.6e+02 Score=20.77 Aligned_cols=18 Identities=0% Similarity=0.204 Sum_probs=10.8
Q ss_pred CCEEEEEcCccCCCCccccCCceEEEE
Q psy14331 169 KKHLVVFGGFHDNLREAKYYNDVHIFD 195 (265)
Q Consensus 169 ~~~iyv~GG~~~~~~~~~~~~~v~~y~ 195 (265)
++..++.|+.+ ..+..||
T Consensus 154 ~~~~l~~~~~d---------~~i~i~d 171 (313)
T 3odt_A 154 SENKFLTASAD---------KTIKLWQ 171 (313)
T ss_dssp TTTEEEEEETT---------SCEEEEE
T ss_pred CCCEEEEEECC---------CCEEEEe
Confidence 45566666643 3467777
No 256
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=20.82 E-value=3.4e+02 Score=22.02 Aligned_cols=73 Identities=7% Similarity=0.059 Sum_probs=42.7
Q ss_pred ceEEEecCCCEEEEEcCcccCCCccccccCCceeEEEcCCCcEEEEecCCCCCCCcCceEEEECCEEEEEcCccCCCCcc
Q psy14331 106 QMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREA 185 (265)
Q Consensus 106 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~p~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 185 (265)
..++++..+++||+.-.. .+.|+++|+....-+.+..... .-..-.++++.++.+|+.--.
T Consensus 249 ~glavd~~~~~lY~aD~~-----------~~~I~~~d~dG~~~~~~~~~~~-~l~~P~gl~v~~~~lywtd~~------- 309 (400)
T 3p5b_L 249 NGITLDLLSGRLYWVDSK-----------LHSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDII------- 309 (400)
T ss_dssp EEEEEETTTTEEEEEETT-----------TTEEEEEETTSCCCEEEEECSS-TTSSEEEEEEETTEEEEEESS-------
T ss_pred EEEEEEeCCCEEEEEECC-----------CCEEEEEeCCCCccEEEEeCCC-CCCCCEEEEEeCCEEEEecCC-------
Confidence 345565567899998321 4679999987654333332210 111223566678899987521
Q ss_pred ccCCceEEEEcCCC
Q psy14331 186 KYYNDVHIFDLETY 199 (265)
Q Consensus 186 ~~~~~v~~y~~~~~ 199 (265)
.+.|+++|..+.
T Consensus 310 --~~~V~~~~~~~G 321 (400)
T 3p5b_L 310 --NEAIFSANRLTG 321 (400)
T ss_dssp --SCSEEEEESSSC
T ss_pred --CCeEEEEEcCCC
Confidence 345777775443
No 257
>2w8x_A ION-channel modulator raklp; salivary gland, kunitz domains, maxik channel activation, sulphur SAD, membrane protein; 1.60A {Rhipicephalus appendiculatus}
Probab=20.79 E-value=57 Score=18.31 Aligned_cols=17 Identities=0% Similarity=-0.040 Sum_probs=13.8
Q ss_pred eeceEEEEecCcccccc
Q psy14331 247 VHTDTFLLTPDSKTLRS 263 (265)
Q Consensus 247 ~~~~~w~~~~~~~~w~~ 263 (265)
-++.+|.|+..++..++
T Consensus 27 hsdqlwhynlrtnrcer 43 (72)
T 2w8x_A 27 HSDQLWHYNLRTNRCER 43 (72)
T ss_dssp EEEEEEEEETTTTEEEE
T ss_pred cchhhhhhhcccchhcc
Confidence 46789999999987764
No 258
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=20.41 E-value=1.1e+02 Score=24.58 Aligned_cols=59 Identities=7% Similarity=-0.004 Sum_probs=27.0
Q ss_pred CCCEEEEECcEEeCCCceeeCCCcccCceEEEEe------eecCCCCCCCccccceEEEecCCCEEEEEcCcccCCCccc
Q psy14331 58 DKDQLILFGGEFYDGQKFVFGSPKALDHLILMNL------FVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQ 131 (265)
Q Consensus 58 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~yd~------w~~~~~~p~~r~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 131 (265)
.++.+|+.+. -..++.+|. |..... +.. .+.+.. ++.+|+.++.
T Consensus 8 ~~~~v~~gs~---------------dg~v~a~d~~tG~~~W~~~~~---~~~-s~p~~~---~g~~~v~~s~-------- 57 (369)
T 2hz6_A 8 PETLLFVSTL---------------DGSLHAVSKRTGSIKWTLKED---PVL-QVPTHV---EEPAFLPDPN-------- 57 (369)
T ss_dssp CTTEEEEEET---------------TSEEEEEETTTCCEEEEEECC---CSC-CCC--------CCEEECTT--------
T ss_pred eCCEEEEEcC---------------CCEEEEEECCCCCEEEEecCC---Cce-ecceEc---CCCEEEEeCC--------
Confidence 4777777544 346777886 654431 111 112222 6667777642
Q ss_pred cccCCceeEEEcCCC--cEE
Q psy14331 132 FHHYKDLWVFRMGEK--KWE 149 (265)
Q Consensus 132 ~~~~~~~~~yd~~~~--~W~ 149 (265)
-..++.+|.+++ .|+
T Consensus 58 ---dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 58 ---DGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp ---TCCEEEC-----CCSEE
T ss_pred ---CCEEEEEECCCCceeee
Confidence 234778887654 454
Done!