RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14331
(265 letters)
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1,
KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 53.8 bits (127), Expect = 5e-09
Identities = 17/124 (13%), Positives = 35/124 (28%), Gaps = 15/124 (12%)
Query: 99 PPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPP 158
+ ++ GG + Y
Sbjct: 180 TAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET--------ETWTFVAPMKH 231
Query: 159 SRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQ 218
RS + + + V GG+ + + + V +D +T W ++ + + RSG
Sbjct: 232 RRSALGITVHQGRIYVLGGYDGH----TFLDSVECYDPDTDTWSEVTRM---TSGRSGVG 284
Query: 219 MAAT 222
+A T
Sbjct: 285 VAVT 288
Score = 43.4 bits (100), Expect = 1e-05
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 9/66 (13%)
Query: 168 LKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKI 227
+ + + GG+ + + + ++ W ++ L PRSG G +
Sbjct: 3 VGRLIYTAGGYFR-----QSLSYLEAYNPSNGTWLRLADL---QVPRSGLAGCVV-GGLL 53
Query: 228 LISGGY 233
GG
Sbjct: 54 YAVGGR 59
Score = 37.6 bits (85), Expect = 0.001
Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 16/148 (10%)
Query: 118 WMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGG 177
+ GG + + +W I +T S +G ++ + GG
Sbjct: 152 YAVGGF------DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 203
Query: 178 FHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQS 237
+ N V +D+ET W + P RS + G+I + GGY +
Sbjct: 204 YDGQ----DQLNSVERYDVETETWTFVAP---MKHRRSALGITV-HQGRIYVLGGYDGHT 255
Query: 238 VKKDVDKGIVHTDTFLLTPDSKTLRSCL 265
V+ TDT+ + RS +
Sbjct: 256 FLDSVECYDPDTDTWSEVTRMTSGRSGV 283
Score = 35.7 bits (80), Expect = 0.003
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 9/85 (10%)
Query: 117 LWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFG 176
++ GG F + L + W ++ D RSG + L G
Sbjct: 7 IYTAGGYFRQSL-------SYLEAYNPSNGTWLRL--ADLQVPRSGLAGCVVGGLLYAVG 57
Query: 177 GFHDNLREAKYYNDVHIFDLETYAW 201
G +++ + + ++ T W
Sbjct: 58 GRNNSPDGNTDSSALDCYNPMTNQW 82
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain
{Fungi (Fusarium sp.) [TaxId: 29916]}
Length = 387
Score = 51.4 bits (121), Expect = 3e-08
Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 7/168 (4%)
Query: 94 SAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVC 153
S G P V A KG++ FGG + + + G
Sbjct: 223 SNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS 282
Query: 154 KDTPPSRSGHRMIALKK-HLVVFGGFHDN--LREAKYYNDVHIFDLETYAWKKIEPLGAG 210
+R+ H + L + GG ++ I+ E + K P
Sbjct: 283 NGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN--- 339
Query: 211 PAPRSGCQMAA-TPDGKILISGGYSKQSVKKDVDKGIVHTDTFLLTPD 257
R ++ PDG++ GG + + T +L +
Sbjct: 340 SIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYNSN 387
Score = 34.4 bits (77), Expect = 0.010
Identities = 22/165 (13%), Positives = 44/165 (26%), Gaps = 12/165 (7%)
Query: 96 PGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKD 155
P P G++ M+ + A +
Sbjct: 13 PTIDLPIVPAAAAIEPTS-GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV 71
Query: 156 TPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRS 215
T + +V G +D ++D + +W P R
Sbjct: 72 TKHDMFCPGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDSWI---PGPDMQVARG 121
Query: 216 GCQMAATPDGKILIS-GGYSKQSVKKDVDKGIVHTDTFLLTPDSK 259
A DG++ G +S +K+ + + T+ P++K
Sbjct: 122 YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK 166
Score = 32.1 bits (71), Expect = 0.060
Identities = 14/135 (10%), Positives = 28/135 (20%), Gaps = 5/135 (3%)
Query: 63 ILFGGEFYDGQKFVFGSPKALDHLILMNLFVSAPGAPPPRCSHQMVALSADKGQLWMFGG 122
G Y + + ++ G ++ GG
Sbjct: 248 TFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG 307
Query: 123 EFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKK--HLVVFGGFHD 180
+ ++ + + K R H + L + GG
Sbjct: 308 QRRGIPFEDSTPVFTPEIYVPEQDTFYKQ--NPNSIVRVYHSISLLLPDGRVFNGGGGLC 365
Query: 181 NLREAKYYNDVHIFD 195
+ D IF
Sbjct: 366 G-DCTTNHFDAQIFT 379
Score = 28.6 bits (62), Expect = 0.84
Identities = 19/157 (12%), Positives = 36/157 (22%), Gaps = 19/157 (12%)
Query: 89 MNLFVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKW 148
+N ++A R + KG ++ G W + G
Sbjct: 167 VNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGP-----------STAMNWYYTSGSGDV 215
Query: 149 EKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDV--------HIFDLETYA 200
+ + + + M G + Y D +
Sbjct: 216 KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS 275
Query: 201 WKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQS 237
+ R+ PDG I+GG +
Sbjct: 276 PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI 312
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 33.9 bits (76), Expect = 0.013
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 4/76 (5%)
Query: 189 NDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGK-ILISGGYSKQSVKKDVDKGIV 247
N++H+ D+ + K + P + PD + + + D+D
Sbjct: 18 NNLHVVDVASDTVYKSCVMPDKFGPGT---AMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 74
Query: 248 HTDTFLLTPDSKTLRS 263
L + + RS
Sbjct: 75 TFHANLSSVPGEVGRS 90
Score = 33.6 bits (75), Expect = 0.018
Identities = 13/89 (14%), Positives = 22/89 (24%), Gaps = 5/89 (5%)
Query: 147 KWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEP 206
V T + + + + D + N + +DL+ K
Sbjct: 230 YGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN 289
Query: 207 LGAGPAPRSGCQMAATPDGKILISGGYSK 235
L +A G L GG
Sbjct: 290 LDHTY-----YCVAFDKKGDKLYLGGTFN 313
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 32.9 bits (73), Expect = 0.031
Identities = 22/236 (9%), Positives = 54/236 (22%), Gaps = 7/236 (2%)
Query: 1 MRGIWDRHAMSWTIMFNEDIEKIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKD 60
+ +R + + D + + + A +
Sbjct: 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA 133
Query: 61 QLILFGGEFYDGQKFVFGSPKALDHLILMNLFVSAPGAPPPRCSHQMVALSADKGQLWMF 120
+ + ++G + L + + + D +W
Sbjct: 134 PRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA--QPDVLAVWNQ 191
Query: 121 GGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHD 180
+ + KD+ + + + + +
Sbjct: 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPA 251
Query: 181 NLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQ 236
R YN + FDLE I+ + + S + + DG + GG
Sbjct: 252 KTRAFGAYNVLESFDLEK--NASIKRVPLPHSYYS---VNVSTDGSTVWLGGALGD 302
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 30.2 bits (66), Expect = 0.22
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)
Query: 189 NDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKK-DVDKGIV 247
+++ + D+ + P+G+ P +PDG + V D V
Sbjct: 12 DNISVIDVTSNKVTATIPVGSNP-----MGAVISPDGTKVYVANAHSNDVSIIDTATNNV 66
Query: 248 H 248
Sbjct: 67 I 67
>d2uubj1 d.58.15.1 (J:3-100) Ribosomal protein S10 {Thermus
thermophilus [TaxId: 274]}
Length = 98
Score = 27.3 bits (61), Expect = 0.62
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 20 IEKIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKD 60
++ + I +R + +P PTR F+ + P K
Sbjct: 14 LDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKH 54
>d2qalj1 d.58.15.1 (J:5-102) Ribosomal protein S10 {Escherichia
coli [TaxId: 562]}
Length = 98
Score = 27.3 bits (61), Expect = 0.62
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 18 EDIEKIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKD 60
I++ +I KR + +P PTR+ F+ L P +
Sbjct: 12 RLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVN 54
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 28.7 bits (62), Expect = 0.73
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 189 NDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQ 236
++VHI++ W ++ L +G + PD +++ G +
Sbjct: 29 HEVHIYEKSGNKWVQVHELKEHNGQVTG--VDWAPDSNRIVTCGTDRN 74
>d1gpqa_ d.233.1.1 (A:) Inhibitor of vertebrate lysozyme, Ivy
{Escherichia coli [TaxId: 562]}
Length = 127
Score = 27.1 bits (60), Expect = 1.0
Identities = 4/21 (19%), Positives = 8/21 (38%)
Query: 41 VVPEPTRRANFSFLAHPDKDQ 61
+ E T + ++L D
Sbjct: 83 TIDEKTSQEKLTWLNVNDALS 103
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 28.3 bits (61), Expect = 1.2
Identities = 19/148 (12%), Positives = 42/148 (28%), Gaps = 3/148 (2%)
Query: 118 WMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGG 177
G + A +S L+ GE+ V + + G + + F
Sbjct: 240 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND 299
Query: 178 FHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQS 237
+ L A + + +D++T + +A G L G
Sbjct: 300 SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVK 359
Query: 238 VKKDVDKGIV---HTDTFLLTPDSKTLR 262
K + + ++ +++R
Sbjct: 360 FLKKGWRSGMGADLNESLCCVCLDRSIR 387
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 27.6 bits (59), Expect = 1.6
Identities = 13/132 (9%), Positives = 33/132 (25%), Gaps = 10/132 (7%)
Query: 105 HQMVALSADKGQLWMFGGEFSSASESQFHHYKDLWVFRMGEKKWEKIVCKDTPPSRSGHR 164
V ++ + A + + + + T +
Sbjct: 170 VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVAC 229
Query: 165 MIALKKHLVVFGGFHDNLREAKYYNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPD 224
+ ++ + G DN V ++++ + I GA S +
Sbjct: 230 VSWSPDNVRLATGSLDN--------SVIVWNMNKPSDHPIIIKGAHA--MSSVNSVIWLN 279
Query: 225 GKILISGGYSKQ 236
++S G
Sbjct: 280 ETTIVSAGQDSN 291
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 27.6 bits (60), Expect = 1.7
Identities = 18/205 (8%), Positives = 42/205 (20%), Gaps = 27/205 (13%)
Query: 12 WTIMFNEDIEKIVRDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYD 71
+ + D+ A V + ++ + A+ +
Sbjct: 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCT-GAQNCSSQAAQANYPGMLVWAVASSILQ 235
Query: 72 GQKFVFGSPKALDHLILMNLFVSAPGAPPPRCSHQMVALSADKGQLWMFGGEFSSASESQ 131
G + A QMVA + + + E S + +
Sbjct: 236 G-DIPAAGATMKAAIDGNESGRKADNFRS--AGFQMVAKLKNTDGIMILTVEHSRSCLAA 292
Query: 132 FHHYKDLWVFRMGEKKWEKIVCKDTPP-----SRSGHRMIALKKHLVVFGGFHDNLREAK 186
+ + + ++ G
Sbjct: 293 AEN---TSSVTASVGQTSGPISNGHDSDAIIAAQDG-------ASDNYANSAGTE----- 337
Query: 187 YYNDVHIFDLETYAWKKIEPLGAGP 211
+ I+D + + L GP
Sbjct: 338 ---VLDIYDAASDQDQSSVELDKGP 359
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 27.1 bits (58), Expect = 2.1
Identities = 13/107 (12%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Query: 139 WVFRMGEKKWEKIVCKDTPPSRSGHRMIALKKHLVVFGGFHDNLREAKYYNDVHIFDLET 198
+ M ++ V L + V G F + A + +D++T
Sbjct: 248 DLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 307
Query: 199 YAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSKQSVKKDVDKG 245
+K+ + + + D K ++ + ++K
Sbjct: 308 ---RKVTEVKNNLT-----DLRLSADRKTVMVRKDDGKIYTFPLEKP 346
>d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome
remodeling ATPase ISWI {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 128
Score = 25.5 bits (56), Expect = 3.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 19 DIEKIVRDIEAEEKRKNKVIE 39
DIE+I+ IE E + + +
Sbjct: 1 DIERIMGQIERGEGKIQRRLS 21
>d1rypl_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 212
Score = 25.9 bits (56), Expect = 4.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 12 WTIMFNEDIEKIVRDIEAEEKRKNKVI 38
W N D+ ++ ++ EE N VI
Sbjct: 185 WIYHGNHDVGELFWKVKEEEGSFNNVI 211
>d1oaoa_ e.26.1.2 (A:) Bifunctional carbon monoxide
dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH)
subunit {Moorella thermoacetica [TaxId: 1525]}
Length = 673
Score = 26.4 bits (58), Expect = 5.0
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 14 IMFNEDIEKIVRDIEA--EEKRKNKVIEKVVPE 44
+F D + R I E + + K V E
Sbjct: 631 FIFEMDPQVAARKILDALEYRTWKLGVHKEVAE 663
>d1knwa1 b.49.2.3 (A:2-31,A:279-422) Diaminopimelate decarboxylase
LysA {Escherichia coli [TaxId: 562]}
Length = 174
Score = 25.4 bits (55), Expect = 5.7
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
Query: 169 KKHLVVFGGFHDNLREAKY-----YNDVHIFDLETYAWKKIEPLGAGPAPRSGCQMA 220
+ ++V GF+D +R A Y + + +E + AGP SG
Sbjct: 45 RHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFT 101
>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein
TTHA0252 {Thermus thermophilus [TaxId: 274]}
Length = 431
Score = 25.7 bits (55), Expect = 6.7
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 7/65 (10%)
Query: 25 RDIEAEEKRKNKVIEKVVPEPTRRANFSFLAHPDKDQLILFGGEFYDGQKFVF---GSPK 81
+I A + E+V + F H +D+L+ ++ G+ V G +
Sbjct: 349 AEIIARPPAVRILGEEVPLRASVHTLGGFSGHAGQDELL----DWLQGEPRVVLVHGEEE 404
Query: 82 ALDHL 86
L L
Sbjct: 405 KLLAL 409
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 24.3 bits (53), Expect = 7.9
Identities = 7/26 (26%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Query: 18 EDIEKIVRDIEA---EEKRKNKVIEK 40
++I+K+VRD EA +++ ++++
Sbjct: 4 DEIQKMVRDAEANAEADRKFEELVQT 29
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 25.5 bits (54), Expect = 8.2
Identities = 7/47 (14%), Positives = 15/47 (31%), Gaps = 4/47 (8%)
Query: 189 NDVHIFDLETYAWKKIEPLGAGPAPRSGCQMAATPDGKILISGGYSK 235
+ +++D + L S T DG + +G +
Sbjct: 292 FNCNVWDALK--ADRAGVLAGHDNRVSCL--GVTDDGMAVATGSWDS 334
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 25.1 bits (54), Expect = 9.3
Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 6/48 (12%)
Query: 198 TYAWKKIEPLGAG-----PAPRSGCQ-MAATPDGKILISGGYSKQSVK 239
+++ P+ +G + + P+G IS G +
Sbjct: 13 FNVHREVTPVELPNCNLVKGIDNGSEDLEILPNGLAFISSGLKYPGIM 60
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.434
Gapped
Lambda K H
0.267 0.0703 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,081,224
Number of extensions: 52100
Number of successful extensions: 200
Number of sequences better than 10.0: 1
Number of HSP's gapped: 198
Number of HSP's successfully gapped: 32
Length of query: 265
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 181
Effective length of database: 1,254,276
Effective search space: 227023956
Effective search space used: 227023956
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (23.9 bits)