BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14335
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VCA5|SYFB_DROME Probable phenylalanine--tRNA ligase beta subunit OS=Drosophila
melanogaster GN=CG5706 PE=2 SV=1
Length = 589
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 136/184 (73%), Gaps = 28/184 (15%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQG-ADNSKGASEDVIYRIDVPANRYDLLCLE 88
TD+EF LCFAFGLELDEVT+EKQ+++KEQG + ASE++IYRID+PANRYDLLCLE
Sbjct: 20 TDDEFQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASEEIIYRIDIPANRYDLLCLE 79
Query: 89 GLYNGLM---------------------------TSQIRPHAVAAVLRNITLNEERYASF 121
GL GL+ T+QIRP+AVAAVLRN+T + Y SF
Sbjct: 80 GLVTGLLVFQGKLKPPKFQFVELAKRQVLKIDPSTAQIRPYAVAAVLRNVTFTQASYNSF 139
Query: 122 IELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMD 181
I+LQDKLHQNICRKRTLVAIGTHDLDT++GPF Y+A P +I+F+PLNQTKE +G+E+MD
Sbjct: 140 IDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEMTGSELMD 199
Query: 182 LYAT 185
Y+T
Sbjct: 200 FYST 203
>sp|Q9WUA2|SYFB_MOUSE Phenylalanine--tRNA ligase beta subunit OS=Mus musculus GN=Farsb
PE=2 SV=2
Length = 589
Score = 228 bits (581), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 134/190 (70%), Gaps = 28/190 (14%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEKQIISKEQG ++GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKQIISKEQGHGKAQGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLM----------------------------TSQIRPHAVAAVLRNITLNEERYASF 121
L GL T+++RP AVAAVLRNI ++RY SF
Sbjct: 80 LARGLQVFKERIKAPVYKRVMPKGDIQKLVITEETAKVRPFAVAAVLRNIKFTKDRYDSF 139
Query: 122 IELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMD 181
IELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y AK PS+I+F+PLN+TKEY+ E+M+
Sbjct: 140 IELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMN 199
Query: 182 LYATSQIRPH 191
+Y T H
Sbjct: 200 IYKTDNHLKH 209
>sp|Q5R7F7|SYFB_PONAB Phenylalanine--tRNA ligase beta subunit OS=Pongo abelii GN=FARSB
PE=2 SV=1
Length = 589
Score = 226 bits (575), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 133/190 (70%), Gaps = 28/190 (14%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEK+IISKEQG + GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLM----------------------------TSQIRPHAVAAVLRNITLNEERYASF 121
L GL T++IRP AVAAVLRNI ++RY SF
Sbjct: 80 LVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSF 139
Query: 122 IELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMD 181
IELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y AK PS+I+F+PLN+TKEY+ E+M+
Sbjct: 140 IELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMN 199
Query: 182 LYATSQIRPH 191
+Y T H
Sbjct: 200 IYKTDNHLKH 209
>sp|Q9NSD9|SYFB_HUMAN Phenylalanine--tRNA ligase beta subunit OS=Homo sapiens GN=FARSB
PE=1 SV=3
Length = 589
Score = 225 bits (574), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 133/190 (70%), Gaps = 28/190 (14%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEK+IISKEQG + GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLM----------------------------TSQIRPHAVAAVLRNITLNEERYASF 121
L GL T++IRP AVAAVLRNI ++RY SF
Sbjct: 80 LVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSF 139
Query: 122 IELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMD 181
IELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y AK PS+I+F+PLN+TKEY+ E+M+
Sbjct: 140 IELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMN 199
Query: 182 LYATSQIRPH 191
+Y T H
Sbjct: 200 IYKTDNHLKH 209
>sp|Q19713|SYFB_CAEEL Phenylalanine--tRNA ligase beta subunit OS=Caenorhabditis elegans
GN=frs-2 PE=1 SV=2
Length = 591
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 124/185 (67%), Gaps = 29/185 (15%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
+++EF LCF +GLELDE+TSEK + KEQG + ++ +Y+ID+PANRYDLL +EG
Sbjct: 20 SEKEFDELCFEYGLELDEITSEKAAVEKEQGTRAASDLNDQEVYKIDIPANRYDLLSVEG 79
Query: 90 LYNGLM-----------------------------TSQIRPHAVAAVLRNITLNEERYAS 120
L + T+Q+RP V AVLR+I+ + + YAS
Sbjct: 80 LARAIRIFKQEIPSPAYKYADVPKTGLQKIIVKKETAQVRPFVVGAVLRDISFDADSYAS 139
Query: 121 FIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIM 180
FI+LQDKLHQNICRKRTLVAIGTHDLDTI+GPF Y A+ P +I+F+PLNQTKEY+ E+M
Sbjct: 140 FIDLQDKLHQNICRKRTLVAIGTHDLDTIQGPFEYRAEAPKDIKFKPLNQTKEYTAEELM 199
Query: 181 DLYAT 185
LY+T
Sbjct: 200 TLYST 204
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T+Q+RP V AVLR+I+ + + YASFI+LQDKLHQNICRKRTLVAIGTHDLDTI+GPF Y
Sbjct: 115 TAQVRPFVVGAVLRDISFDADSYASFIDLQDKLHQNICRKRTLVAIGTHDLDTIQGPFEY 174
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLYA 273
A+ P +I+F+PLNQTKEYT E+M LY+
Sbjct: 175 RAEAPKDIKFKPLNQTKEYTAEELMTLYS 203
>sp|Q9SGE9|SYFB_ARATH Probable phenylalanine--tRNA ligase beta subunit OS=Arabidopsis
thaliana GN=At1g72550 PE=2 SV=1
Length = 598
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 120/185 (64%), Gaps = 29/185 (15%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
T E+F LCF+FG+ELD+VT+EK II KE+ D E++IY+I++PANR DLLCLEG
Sbjct: 20 TQEKFEELCFSFGIELDDVTTEKAIIRKEKHIDEEADDDEEIIYKIEIPANRPDLLCLEG 79
Query: 90 LYNGLM-----------------------------TSQIRPHAVAAVLRNITLNEERYAS 120
L L TS+IRP V AVLR +T +E RY S
Sbjct: 80 LAQSLRVFIEKQEIPTYTLADISKDKILQMNVKPETSKIRPFVVCAVLRGVTFDEARYNS 139
Query: 121 FIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIM 180
FI+LQDKLHQNICR+R+LVAIGTHDLDT++GPF Y+A PP++I F PL QTK + E++
Sbjct: 140 FIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTYEALPPTDINFVPLKQTKSFRADELI 199
Query: 181 DLYAT 185
+ Y +
Sbjct: 200 EFYKS 204
>sp|Q550D2|SYFB_DICDI Phenylalanine--tRNA ligase beta subunit OS=Dictyostelium discoideum
GN=phesB PE=3 SV=2
Length = 617
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 115/185 (62%), Gaps = 29/185 (15%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
T E+F LCFAFG+ELDEVTSE+++ E G ++ S+DVIY+IDV ANRYDLLCLEG
Sbjct: 23 TQEQFEDLCFAFGVELDEVTSEREMKKNETGVEDLT-VSDDVIYKIDVSANRYDLLCLEG 81
Query: 90 ----------------------------LYNGLMTSQIRPHAVAAVLRNITLNEERYASF 121
LY +RP VA +LR+IT +E Y SF
Sbjct: 82 IARALNVYNHKASIPKYQIVPPKNSHEKLYISKEVESVRPVIVAGILRDITFTQESYDSF 141
Query: 122 IELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMD 181
I+LQ+KLH NIC+KR+LV+IGTHDLDT+ GPF Y A P +I+F PL+QTKEY+ E+
Sbjct: 142 IDLQEKLHANICKKRSLVSIGTHDLDTLSGPFYYKALAPKDIKFVPLSQTKEYNAEELFK 201
Query: 182 LYATS 186
Y S
Sbjct: 202 FYDES 206
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 64/85 (75%)
Query: 188 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 247
+RP VA +LR+IT +E Y SFI+LQ+KLH NIC+KR+LV+IGTHDLDT+ GPF Y A
Sbjct: 119 VRPVIVAGILRDITFTQESYDSFIDLQEKLHANICKKRSLVSIGTHDLDTLSGPFYYKAL 178
Query: 248 PPSEIRFQPLNQTKEYTGTEIMDLY 272
P +I+F PL+QTKEY E+ Y
Sbjct: 179 APKDIKFVPLSQTKEYNAEELFKFY 203
>sp|P15624|SYFB_YEAST Phenylalanine--tRNA ligase beta subunit OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FRS1 PE=1 SV=3
Length = 595
Score = 167 bits (423), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 114/183 (62%), Gaps = 36/183 (19%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
T +EF LCF FG+E+DE T+E+ + + E+ ++D+ ANRYDLLC+EG
Sbjct: 20 TSQEFDELCFEFGMEMDEDTTEEALKTGEEPE-----------LKLDISANRYDLLCIEG 68
Query: 90 LYNGL-------------------------MTSQIRPHAVAAVLRNITLNEERYASFIEL 124
+ L T QIRP A AAVLRNI LNE+ YASFI L
Sbjct: 69 ISQSLNEYLERKERPDYKLSKPTTKLIIDKSTEQIRPFATAAVLRNIKLNEKSYASFIAL 128
Query: 125 QDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYA 184
QDKLH N+CR R+LVA+GTHDLD+I+GPF Y A PP +I+F PLNQT+E++G ++++ Y
Sbjct: 129 QDKLHANLCRNRSLVAMGTHDLDSIEGPFHYRALPPKDIKFVPLNQTQEFTGDKLIEFYK 188
Query: 185 TSQ 187
+ +
Sbjct: 189 SPE 191
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 74/89 (83%)
Query: 184 ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI 243
+T QIRP A AAVLRNI LNE+ YASFI LQDKLH N+CR R+LVA+GTHDLD+I+GPF
Sbjct: 99 STEQIRPFATAAVLRNIKLNEKSYASFIALQDKLHANLCRNRSLVAMGTHDLDSIEGPFH 158
Query: 244 YDAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
Y A PP +I+F PLNQT+E+TG ++++ Y
Sbjct: 159 YRALPPKDIKFVPLNQTQEFTGDKLIEFY 187
>sp|O13432|SYFB_CANAX Phenylalanine--tRNA ligase beta subunit OS=Candida albicans GN=FRS1
PE=2 SV=3
Length = 592
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 106/181 (58%), Gaps = 38/181 (20%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
T EEF LCF FG+ELDE T+E + KG E +I+VPANRYD+LC+EG
Sbjct: 20 TTEEFDELCFQFGIELDEDTTE-----------DVKGTDERPQLKIEVPANRYDMLCIEG 68
Query: 90 LYNGL---------------------------MTSQIRPHAVAAVLRNITLNEERYASFI 122
+ L T IR +A +A+LRN+ L+E Y SFI
Sbjct: 69 IAQALNEFLGNTSAPNYKLSPSKPEISLTIKESTYPIRQYAASAILRNVNLDERAYDSFI 128
Query: 123 ELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDL 182
LQDKLH N+CR RTLVAIGTHDLDT+ PF Y+A P +I F+PLNQTKE +G E+M+
Sbjct: 129 ALQDKLHANLCRNRTLVAIGTHDLDTLTPPFTYEALAPKDIVFKPLNQTKEINGEELMEF 188
Query: 183 Y 183
Y
Sbjct: 189 Y 189
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 67/89 (75%)
Query: 184 ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI 243
+T IR +A +A+LRN+ L+E Y SFI LQDKLH N+CR RTLVAIGTHDLDT+ PF
Sbjct: 101 STYPIRQYAASAILRNVNLDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDTLTPPFT 160
Query: 244 YDAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
Y+A P +I F+PLNQTKE G E+M+ Y
Sbjct: 161 YEALAPKDIVFKPLNQTKEINGEELMEFY 189
>sp|O42849|SYFB_SCHPO Phenylalanine--tRNA ligase beta subunit OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=frs1 PE=3 SV=1
Length = 589
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 107/183 (58%), Gaps = 35/183 (19%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
T +EF LCF FG+ELDE T+ D + SE +ID+PANRYD+LCLEG
Sbjct: 20 TTQEFDELCFQFGIELDEDTTN----------DPERSPSERPSLKIDIPANRYDMLCLEG 69
Query: 90 LYNGLM-------------------------TSQIRPHAVAAVLRNITLNEERYASFIEL 124
+ L TS+IRP+A AA+LR + L+ RY SFI L
Sbjct: 70 IAQALNVFNRRMATPQYKLLPSTTSLTISPETSEIRPYAAAAILRGVKLDPIRYQSFIAL 129
Query: 125 QDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYA 184
QDKLH N+CR RTLVAIGTHD ++GPF Y+A P EI F PLNQT+E +G+ +++ Y
Sbjct: 130 QDKLHANLCRNRTLVAIGTHDFSVMEGPFTYEALKPEEINFVPLNQTQEINGSNLLEFYK 189
Query: 185 TSQ 187
S+
Sbjct: 190 DSK 192
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
TS+IRP+A AA+LR + L+ RY SFI LQDKLH N+CR RTLVAIGTHD ++GPF Y
Sbjct: 101 TSEIRPYAAAAILRGVKLDPIRYQSFIALQDKLHANLCRNRTLVAIGTHDFSVMEGPFTY 160
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
+A P EI F PLNQT+E G+ +++ Y
Sbjct: 161 EALKPEEINFVPLNQTQEINGSNLLEFY 188
>sp|Q8SS40|SYFB_ENCCU Probable phenylalanine--tRNA ligase beta subunit OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU04_0900 PE=3 SV=1
Length = 557
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 87/173 (50%), Gaps = 40/173 (23%)
Query: 31 DEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEGL 90
D F + F FGLELD+V E+ +YRI++PANRYDLLC EGL
Sbjct: 21 DRRFEKILFDFGLELDDVVEEEG----------------KTMYRIEIPANRYDLLCAEGL 64
Query: 91 YNGLMT-----------------------SQIRPHAVAAVLRNI-TLNEERYASFIELQD 126
L + RP AV++ + L+E Y SFI+ QD
Sbjct: 65 CYALRAFLSMETYEDIDVEEGEVVVYKTGGEERPCIACAVIKGVDLLSEGAYKSFIDYQD 124
Query: 127 KLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEI 179
KLH I R R LV++GTHDLD IKGP Y ++ P I F+PLN +E +G E+
Sbjct: 125 KLHLTIGRNRALVSMGTHDLDKIKGPVFYKSETPERIGFKPLNAEREVNGKEL 177
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 189 RPHAVAAVLRNI-TLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 247
RP AV++ + L+E Y SFI+ QDKLH I R R LV++GTHDLD IKGP Y ++
Sbjct: 97 RPCIACAVIKGVDLLSEGAYKSFIDYQDKLHLTIGRNRALVSMGTHDLDKIKGPVFYKSE 156
Query: 248 PPSEIRFQPLNQTKEYTGTEI 268
P I F+PLN +E G E+
Sbjct: 157 TPERIGFKPLNAEREVNGKEL 177
>sp|C4VA52|SYFB_NOSCE Probable phenylalanine--tRNA ligase beta subunit OS=Nosema ceranae
(strain BRL01) GN=NCER_101490 PE=3 SV=1
Length = 504
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 39/171 (22%)
Query: 32 EEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEGLY 91
E F+ + F +GLE+DE E S+D+ Y+I++PANRYDLLC EGL
Sbjct: 22 ETFSDILFNYGLEIDECIEE----------------SDDITYKIEIPANRYDLLCAEGLN 65
Query: 92 NGLMTSQI-----------------------RPHAVAAVLRNITLNEERYASFIELQDKL 128
L + R AA+++N ++ Y SFI Q+KL
Sbjct: 66 YALQSYLFGKVFEDINLQSSEYTIFKQHFGNRSCVAAAIIKNYKFDKYSYDSFISYQEKL 125
Query: 129 HQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEI 179
N+ R R+LV++GTHDLDTI P Y + +E++F PLN TKE + E+
Sbjct: 126 CGNLGRNRSLVSMGTHDLDTISWPVTYKSIKKTELKFAPLNCTKEINDLEM 176
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
R AA+++N ++ Y SFI Q+KL N+ R R+LV++GTHDLDTI P Y +
Sbjct: 97 RSCVAAAIIKNYKFDKYSYDSFISYQEKLCGNLGRNRSLVSMGTHDLDTISWPVTYKSIK 156
Query: 249 PSEIRFQPLNQTKEYTGTEI 268
+E++F PLN TKE E+
Sbjct: 157 KTELKFAPLNCTKEINDLEM 176
>sp|A9CS50|SYFB_ENTBH Probable phenylalanine--tRNA ligase beta subunit OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_21956 PE=3 SV=1
Length = 566
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 86/176 (48%), Gaps = 45/176 (25%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
+D+E + F+ G+E+D II ++ G V+Y++D+ ANRYDLLCLEG
Sbjct: 20 SDDEIEKILFSLGIEMD-------IICEDTGV---------VVYKLDIAANRYDLLCLEG 63
Query: 90 LYNGLMT----SQI--------------------RPHAVAAVLRNITLNEERYASFIELQ 125
L + T S I RP ++RN N Y FIE Q
Sbjct: 64 LAKIINTYLHGSSIISKPIIRKSSIKVIQESVSKRPFIACGIIRNARFN---YKHFIEYQ 120
Query: 126 DKLHQNICRKRTLVAIGTHDLDTIKG--PFIYDAKPPSEIRFQPLNQTKEYSGTEI 179
DKLHQ I R R+ VAIGTHDLD P Y +++ FQPLN + E GTE+
Sbjct: 121 DKLHQTIGRNRSAVAIGTHDLDKFYNGKPIKYKTIKLNKLCFQPLNISTEIKGTEL 176
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKG--PFIYDA 246
RP ++RN N Y FIE QDKLHQ I R R+ VAIGTHDLD P Y
Sbjct: 98 RPFIACGIIRNARFN---YKHFIEYQDKLHQTIGRNRSAVAIGTHDLDKFYNGKPIKYKT 154
Query: 247 KPPSEIRFQPLNQTKEYTGTEI 268
+++ FQPLN + E GTE+
Sbjct: 155 IKLNKLCFQPLNISTEIKGTEL 176
>sp|B1L7C0|SYFB_KORCO Phenylalanine--tRNA ligase beta subunit OS=Korarchaeum cryptofilum
(strain OPF8) GN=pheT PE=3 SV=1
Length = 556
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 40 AFGLELD-EVTSEKQ-IISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEGLYNGLMTS 97
+FG E+ EVTS++ +++ E KG S + + +P R E + G +
Sbjct: 36 SFGEEVGFEVTSDRMDLVTLEGIVRCLKGISNE---ELGLPKYRVRRKAFE-VRVGEGVA 91
Query: 98 QIRPHAVAAVLRNITL-NEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 156
++RP+ VAA++R++ L EE + IE Q+K+H + RKR VAIG HD +K P IYD
Sbjct: 92 KVRPYVVAALVRDVDLRTEESLVALIEAQEKIHDTLGRKRRRVAIGLHDFSKVKPPIIYD 151
Query: 157 AKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAVA 194
A+ E+ F PL + E S EI++ +I H +A
Sbjct: 152 ARRAEEVHFVPLGEYAEMSAKEILEQTEKGKIYSHLIA 189
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 184 ATSQIRPHAVAAVLRNITL-NEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPF 242
+++RP+ VAA++R++ L EE + IE Q+K+H + RKR VAIG HD +K P
Sbjct: 89 GVAKVRPYVVAALVRDVDLRTEESLVALIEAQEKIHDTLGRKRRRVAIGLHDFSKVKPPI 148
Query: 243 IYDAKPPSEIRFQPLNQTKEYTGTEIMD 270
IYDA+ E+ F PL + E + EI++
Sbjct: 149 IYDARRAEEVHFVPLGEYAEMSAKEILE 176
>sp|C6A237|SYFB_THESM Phenylalanine--tRNA ligase beta subunit OS=Thermococcus sibiricus
(strain MM 739 / DSM 12597) GN=pheT PE=3 SV=1
Length = 560
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 21 LPSTVAGHGTDEEFASLCFAFGLELDEVTS-EKQIISKEQGADNSK---GASEDVIYRID 76
L V T +E+ L ELD++ E +I K D ++ ++E + ++
Sbjct: 11 LERLVGKEFTVDEWEDLFLYAKCELDDIWEHEGKIYFKADAKDTNRPDLWSAEGIARQV- 69
Query: 77 VPANRYDLLCLEGL------------YNGLMTSQIRPHAVAAVLRNITLNEERYASFIEL 124
R+ L L GL Y IRP+ V A++ ++ L+EE I+L
Sbjct: 70 ----RWALGMLRGLPRYSIEESNVMVYVDENLKDIRPYGVYAIVEDLELDEEALKQIIQL 125
Query: 125 QDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYA 184
Q+K+ + RKR VAIGT D D + PF Y A P +I+F PLN +E S EI++ +
Sbjct: 126 QEKVALTLGRKRKEVAIGTFDFDKLSPPFYYKAVEPQKIKFIPLNCEREMSADEILEEHE 185
Query: 185 TSQIRPHAVAA 195
+ H +
Sbjct: 186 KGKEYGHLIKG 196
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 188 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 247
IRP+ V A++ ++ L+EE I+LQ+K+ + RKR VAIGT D D + PF Y A
Sbjct: 100 IRPYGVYAIVEDLELDEEALKQIIQLQEKVALTLGRKRKEVAIGTFDFDKLSPPFYYKAV 159
Query: 248 PPSEIRFQPLNQTKEYTGTEIMD 270
P +I+F PLN +E + EI++
Sbjct: 160 EPQKIKFIPLNCEREMSADEILE 182
>sp|Q4J8Q0|SYFB_SULAC Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=pheT PE=3 SV=1
Length = 542
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
RP+AVA ++++I L++E I+ Q+KLH + RKR VAIG HDLD I IY
Sbjct: 92 RPYAVAGIVKDIKLDDESLRELIQFQEKLHITVGRKRKKVAIGIHDLDKITSTKIYYKPL 151
Query: 249 PSEIRFQPLNQTKEYTGTEIMD 270
P + +F PLNQ+K T E+++
Sbjct: 152 PLDYKFIPLNQSKLMTIKEVIE 173
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 100 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 159
RP+AVA ++++I L++E I+ Q+KLH + RKR VAIG HDLD I IY
Sbjct: 92 RPYAVAGIVKDIKLDDESLRELIQFQEKLHITVGRKRKKVAIGIHDLDKITSTKIYYKPL 151
Query: 160 PSEIRFQPLNQTKEYSGTEIMD 181
P + +F PLNQ+K + E+++
Sbjct: 152 PLDYKFIPLNQSKLMTIKEVIE 173
>sp|A6UPQ4|SYFB_METVS Phenylalanine--tRNA ligase beta subunit OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pheT PE=3 SV=1
Length = 554
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 25/148 (16%)
Query: 65 KGASEDVIYRIDVPANRYDLLCLEGLYNG------------------------LMTSQIR 100
K + I + + +R D L +EGL G ++ ++ R
Sbjct: 44 KSGKKQKIIQFSINPDRPDYLSVEGLARGFRGFMGINTGFQQFDVYESDTNVTVLDNESR 103
Query: 101 PHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPP 160
P+ A+++N+ ++E S I LQ+KLH + R R +AIG HD D +KGPF Y
Sbjct: 104 PYIAFALVKNVQMDEMVLESIINLQEKLHWALGRDRKKLAIGVHDFDMVKGPFTYKEIKG 163
Query: 161 SEIRFQPLN-QTKEYSGTEIMDLYATSQ 187
EI+F PL ++E + EI++ + Q
Sbjct: 164 DEIKFAPLGYDSEEMTPKEILEKHEKGQ 191
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 175 SGTEIMDLYAT--------SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRT 226
+G + D+Y + ++ RP+ A+++N+ ++E S I LQ+KLH + R R
Sbjct: 81 TGFQQFDVYESDTNVTVLDNESRPYIAFALVKNVQMDEMVLESIINLQEKLHWALGRDRK 140
Query: 227 LVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLN-QTKEYTGTEIMD 270
+AIG HD D +KGPF Y EI+F PL ++E T EI++
Sbjct: 141 KLAIGVHDFDMVKGPFTYKEIKGDEIKFAPLGYDSEEMTPKEILE 185
>sp|Q2NGX9|SYFB_METST Phenylalanine--tRNA ligase beta subunit OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=pheT PE=3 SV=1
Length = 559
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 187 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
IRP+ +++N+ +++ + + +E Q+ LH I R R VAIG HDLD ++GPF Y A
Sbjct: 94 NIRPYVACCMIKNVKIDDNQLRNIMEFQEHLHWVIGRDRKKVAIGIHDLDKVEGPFYYKA 153
Query: 247 KPPSEIRFQPLNQTKEYTGTEIMD 270
P+E F PL + T EI++
Sbjct: 154 GNPNETSFIPLESRENLTLNEILE 177
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 98 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
IRP+ +++N+ +++ + + +E Q+ LH I R R VAIG HDLD ++GPF Y A
Sbjct: 94 NIRPYVACCMIKNVKIDDNQLRNIMEFQEHLHWVIGRDRKKVAIGIHDLDKVEGPFYYKA 153
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMD 181
P+E F PL + + EI++
Sbjct: 154 GNPNETSFIPLESRENLTLNEILE 177
>sp|A3CT77|SYFB_METMJ Phenylalanine--tRNA ligase beta subunit OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pheT
PE=3 SV=1
Length = 546
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 186 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 245
+ IRP +AV+RN+ L+EE S + LQ+ LH + R R VAIG HDLDT+ PF Y
Sbjct: 91 ADIRPFLGSAVIRNVNLDEEAIESLMALQEALHWAVGRGRGKVAIGVHDLDTVTPPFRYI 150
Query: 246 AKPPSEIRFQPLNQTKEYTGTEIM 269
A P + F PL+ +E T E++
Sbjct: 151 ASPRNR-SFVPLDFEREMTMEEML 173
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 97 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 156
+ IRP +AV+RN+ L+EE S + LQ+ LH + R R VAIG HDLDT+ PF Y
Sbjct: 91 ADIRPFLGSAVIRNVNLDEEAIESLMALQEALHWAVGRGRGKVAIGVHDLDTVTPPFRYI 150
Query: 157 AKPPSEIRFQPLNQTKEYSGTEIM 180
A P + F PL+ +E + E++
Sbjct: 151 ASPRNR-SFVPLDFEREMTMEEML 173
>sp|Q3ITU5|SYFB_NATPD Phenylalanine--tRNA ligase beta subunit OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=pheT PE=3 SV=1
Length = 572
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 96/244 (39%), Gaps = 64/244 (26%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
+D+E FA GLE +G S+D + ++ +R D L +EG
Sbjct: 21 SDDELKDDLFALGLEF-------------------EGESDDGDFELEFAPDRLDRLSVEG 61
Query: 90 LYNGL--------------------------MTSQIRPHAVAAVLRNITLNEERYASFIE 123
+ L + RP+ AV+R + L++ + S I+
Sbjct: 62 IARSLRYQYGHDRGIDVPKTNDAEWTITVDESVPEARPYVTGAVVRGLDLDDTQLDSLIQ 121
Query: 124 LQDKLHQNICRKRTLVAIGTHDLDTIKGPFI-YDAKP----------PSEIRFQPLNQTK 172
LQ+KLH + R R AIG HDL +KG D KP P RF PL+
Sbjct: 122 LQEKLHATMGRNRAKGAIGVHDLTMLKGGGARSDGKPSKSITYRGVDPDGDRFVPLDDDA 181
Query: 173 EYSGTEIMDLYATSQIRPHAVAAVLRNITLNEE-RYASFIELQDKLHQNICRKRTLVAIG 231
E + E++D + T + H V + R + ++ SF + I RT V G
Sbjct: 182 ERTPAEVLDAHPTGETYGHLVDGLDRFPAIYDDIGLFSFPPV-------INGSRTEVDTG 234
Query: 232 THDL 235
T DL
Sbjct: 235 TRDL 238
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 184 ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI 243
+ + RP+ AV+R + L++ + S I+LQ+KLH + R R AIG HDL +KG
Sbjct: 93 SVPEARPYVTGAVVRGLDLDDTQLDSLIQLQEKLHATMGRNRAKGAIGVHDLTMLKGGGA 152
Query: 244 -YDAKP----------PSEIRFQPLNQTKEYTGTEIMDLY 272
D KP P RF PL+ E T E++D +
Sbjct: 153 RSDGKPSKSITYRGVDPDGDRFVPLDDDAERTPAEVLDAH 192
>sp|A7I615|SYFB_METB6 Phenylalanine--tRNA ligase beta subunit OS=Methanoregula boonei
(strain 6A8) GN=pheT PE=3 SV=1
Length = 542
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 186 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 245
+ IRP +AV+RN++ ++E S + LQ+ LH + R R+ VAIG HDLDTI PF Y
Sbjct: 91 AAIRPCLASAVIRNVSFDDESILSVMALQEALHWAVGRGRSKVAIGIHDLDTITPPFHYV 150
Query: 246 AKPPSEIRFQPLNQTKEYTGTEIMD 270
A P +F PL+ T E T I++
Sbjct: 151 ASPRVR-KFVPLDFTDELTLDGILE 174
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 97 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 156
+ IRP +AV+RN++ ++E S + LQ+ LH + R R+ VAIG HDLDTI PF Y
Sbjct: 91 AAIRPCLASAVIRNVSFDDESILSVMALQEALHWAVGRGRSKVAIGIHDLDTITPPFHYV 150
Query: 157 AKPPSEIRFQPLNQTKEYSGTEIMD 181
A P +F PL+ T E + I++
Sbjct: 151 ASPRVR-KFVPLDFTDELTLDGILE 174
>sp|Q5UYF3|SYFB_HALMA Phenylalanine--tRNA ligase beta subunit OS=Haloarcula marismortui
(strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
GN=pheT PE=3 SV=1
Length = 584
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 53/198 (26%)
Query: 31 DEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEGL 90
D+E S F GLE +G +ED ++++ +R D L +EG+
Sbjct: 22 DDELKSDLFNLGLEF-------------------EGWTEDDEFQLEFAPDRLDRLSVEGV 62
Query: 91 YNGL-------------------MTSQI------RPHAVAAVLRNITLNEERYASFIELQ 125
L T ++ RP+ A++R + ++E S I+LQ
Sbjct: 63 ARSLRYHYGDDRGVEIPNTNSADWTIEVEDQPDERPYVTGAIVRGLDMDEAALESLIQLQ 122
Query: 126 DKLHQNICRKRTLVAIGTHDLDTIKGPFI---------YDAKPPSEIRFQPLNQTKEYSG 176
+KLH + RKR AIG HDL +KG + Y + P E F PL+ E +
Sbjct: 123 EKLHATMGRKRAKGAIGVHDLTMLKGDSVTDETGKSITYTSADPDEATFVPLDADAEMTP 182
Query: 177 TEIMDLYATSQIRPHAVA 194
+E+M + T Q VA
Sbjct: 183 SEVMASHETGQTYGDLVA 200
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI----- 243
RP+ A++R + ++E S I+LQ+KLH + RKR AIG HDL +KG +
Sbjct: 97 RPYVTGAIVRGLDMDEAALESLIQLQEKLHATMGRKRAKGAIGVHDLTMLKGDSVTDETG 156
Query: 244 ----YDAKPPSEIRFQPLNQTKEYTGTEIM 269
Y + P E F PL+ E T +E+M
Sbjct: 157 KSITYTSADPDEATFVPLDADAEMTPSEVM 186
>sp|O26864|SYFB_METTH Phenylalanine--tRNA ligase beta subunit OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pheT PE=1 SV=2
Length = 549
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 175 SGTEIMDLYATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHD 234
SG E+ + +RP+ AV+ ++ +++ +E Q+ LH I R R VAIG HD
Sbjct: 81 SGVEVTVDESVLDVRPYLGMAVIEDVQFTDKKLKQVMEFQEDLHWVIGRDRRKVAIGIHD 140
Query: 235 LDTIKGPFIYDAKPPSEIRFQPLNQTKEYTGTEIMD 270
LD ++ PF+Y P + F PL+ E T EI++
Sbjct: 141 LDRVEPPFLYSGVEPEGVTFTPLDSVCEMTPHEILE 176
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 99 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 158
+RP+ AV+ ++ +++ +E Q+ LH I R R VAIG HDLD ++ PF+Y
Sbjct: 94 VRPYLGMAVIEDVQFTDKKLKQVMEFQEDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGV 153
Query: 159 PPSEIRFQPLNQTKEYSGTEIMD 181
P + F PL+ E + EI++
Sbjct: 154 EPEGVTFTPLDSVCEMTPHEILE 176
>sp|Q505F5|LRC47_MOUSE Leucine-rich repeat-containing protein 47 OS=Mus musculus GN=Lrrc47
PE=1 SV=1
Length = 581
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 99 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+RP+ V A++R + L F+ Q KLH ++C KRT I THDL ++GP +Y A
Sbjct: 331 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 390
Query: 158 KPPSEIRFQPLNQTKEYSGTEIM 180
+PP +++ PL + KE E++
Sbjct: 391 RPPEDLKIVPLGR-KEAKAKELV 412
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 188 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+RP+ V A++R + L F+ Q KLH ++C KRT I THDL ++GP +Y A
Sbjct: 331 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 390
Query: 247 KPPSEIRFQPLNQTKEYTGTEIM 269
+PP +++ PL + KE E++
Sbjct: 391 RPPEDLKIVPLGR-KEAKAKELV 412
>sp|A6UWT1|SYFB_META3 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus aeolicus
(strain Nankai-3 / ATCC BAA-1280) GN=pheT PE=3 SV=1
Length = 554
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 175 SGTEIMDLYATS--------QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRT 226
+G D+YA+ + RP+ A+++NI +++ S I LQ+KLH +I R R
Sbjct: 76 AGLPKYDIYASDLEVYVENVKSRPYCGFAIIKNIIIDDLVLESIINLQEKLHWSIGRDRK 135
Query: 227 LVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYTGTEIMD 270
+AIG HDLD I+ PF Y EI F+PL + T E+++
Sbjct: 136 KMAIGIHDLDKIEAPFYYKEINGDEIEFEPLGHNELMTPKEVLE 179
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 100 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 159
RP+ A+++NI +++ S I LQ+KLH +I R R +AIG HDLD I+ PF Y
Sbjct: 98 RPYCGFAIIKNIIIDDLVLESIINLQEKLHWSIGRDRKKMAIGIHDLDKIEAPFYYKEIN 157
Query: 160 PSEIRFQPLNQTKEYSGTEIMD 181
EI F+PL + + E+++
Sbjct: 158 GDEIEFEPLGHNELMTPKEVLE 179
>sp|Q2FLL1|SYFB_METHJ Phenylalanine--tRNA ligase beta subunit OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=pheT PE=3 SV=1
Length = 545
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 187 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
++RP+ +AV+R+I L+ E S + +Q+ LH + R R VAIG HDLD + PF Y
Sbjct: 92 EVRPYIGSAVIRDIQLDNEAIISLMGVQEALHWVVGRGRAKVAIGVHDLDKVTPPFRYYG 151
Query: 247 KPPSEIRFQPLNQTKEYTGTEIMD 270
P + F PL+ +E T TEIM+
Sbjct: 152 APVTR-SFIPLDYDREMTLTEIME 174
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 98 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
++RP+ +AV+R+I L+ E S + +Q+ LH + R R VAIG HDLD + PF Y
Sbjct: 92 EVRPYIGSAVIRDIQLDNEAIISLMGVQEALHWVVGRGRAKVAIGVHDLDKVTPPFRYYG 151
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAV 193
P + F PL+ +E + TEIM+ + + H V
Sbjct: 152 APVTR-SFIPLDYDREMTLTEIMEEHPKGRDYSHIV 186
>sp|Q8N1G4|LRC47_HUMAN Leucine-rich repeat-containing protein 47 OS=Homo sapiens GN=LRRC47
PE=1 SV=1
Length = 583
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 99 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+RP+ V AV+R + L F+ Q KLH+++C KRT + TH+L +KGP +Y A
Sbjct: 332 VRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYCA 391
Query: 158 KPPSEIRFQPLNQTKEYSGTEIM 180
+PP +++ PL + KE E++
Sbjct: 392 RPPQDLKIVPLGR-KEAKAKELV 413
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 188 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+RP+ V AV+R + L F+ Q KLH+++C KRT + TH+L +KGP +Y A
Sbjct: 332 VRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYCA 391
Query: 247 KPPSEIRFQPLNQTKEYTGTEIM 269
+PP +++ PL + KE E++
Sbjct: 392 RPPQDLKIVPLGR-KEAKAKELV 413
>sp|Q6LXU2|SYFB_METMP Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain S2 / LL) GN=pheT PE=3 SV=1
Length = 554
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 186 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 245
++ RP+ A+++N+ ++E S I LQ+KLH I R R +AIG HD D +K PF Y
Sbjct: 100 NETRPYVAFALVKNVLMDEFVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYK 159
Query: 246 AKPPSEIRFQPLN-QTKEYTGTEIMD 270
EI+F PL + +E T EI++
Sbjct: 160 EIKGDEIKFVPLGYEDEEMTPREIIE 185
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 97 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 156
++ RP+ A+++N+ ++E S I LQ+KLH I R R +AIG HD D +K PF Y
Sbjct: 100 NETRPYVAFALVKNVLMDEFVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYK 159
Query: 157 AKPPSEIRFQPLN-QTKEYSGTEIMD 181
EI+F PL + +E + EI++
Sbjct: 160 EIKGDEIKFVPLGYEDEEMTPREIIE 185
>sp|A6VGJ4|SYFB_METM7 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pheT PE=3
SV=1
Length = 554
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 186 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 245
++ RP+ A+++N+ ++E S I LQ+KLH I R R +AIG HD D +K PF Y
Sbjct: 100 NKTRPYVAFALVKNVLMDELVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYK 159
Query: 246 AKPPSEIRFQPLN-QTKEYTGTEIMD 270
EI+F PL + +E T EI++
Sbjct: 160 EIKGDEIKFVPLGYEDEEMTPREIIE 185
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 25/142 (17%)
Query: 65 KGASEDVIYRIDVPANRYDLLCLEGL---YNGLM---------------------TSQIR 100
K + + + + +R D L +EGL + G M ++ R
Sbjct: 44 KSGKKQKMVQFSINPDRPDYLSVEGLARGFRGFMGITTGIQEFEVLPSDIKVTVEENKTR 103
Query: 101 PHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPP 160
P+ A+++N+ ++E S I LQ+KLH I R R +AIG HD D +K PF Y
Sbjct: 104 PYVAFALVKNVLMDELVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYKEIKG 163
Query: 161 SEIRFQPLN-QTKEYSGTEIMD 181
EI+F PL + +E + EI++
Sbjct: 164 DEIKFVPLGYEDEEMTPREIIE 185
>sp|A4YIL0|SYFB_METS5 Phenylalanine--tRNA ligase beta subunit OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=pheT PE=3 SV=1
Length = 540
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 25/133 (18%)
Query: 73 YRIDVPANRYDLLCLEGLY---NGLMTSQI---------------------RPHAVAAVL 108
Y I+V A+R D+L L G+ G+ ++ RP+A+A V+
Sbjct: 41 YSIEVNADRLDMLSLGGIVRALKGITGKELGEPSYPVKDTDYVLEVEKVASRPYALACVI 100
Query: 109 RNITLNEERY-ASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQP 167
N+ L+ + Y I+ Q+KLH I R+R VAIG HDL+ ++G I A F P
Sbjct: 101 YNVKLSPDFYLKELIQFQEKLHDTIGRRRKKVAIGIHDLEKVEGKIIRYAPVSLSTTFIP 160
Query: 168 LNQTKEYSGTEIM 180
LNQ +E S +++
Sbjct: 161 LNQEREMSVRDVL 173
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 189 RPHAVAAVLRNITLNEERY-ASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 247
RP+A+A V+ N+ L+ + Y I+ Q+KLH I R+R VAIG HDL+ ++G I A
Sbjct: 92 RPYALACVIYNVKLSPDFYLKELIQFQEKLHDTIGRRRKKVAIGIHDLEKVEGKIIRYAP 151
Query: 248 PPSEIRFQPLNQTKEYTGTEIM 269
F PLNQ +E + +++
Sbjct: 152 VSLSTTFIPLNQEREMSVRDVL 173
>sp|A4FWS3|SYFB_METM5 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pheT PE=3
SV=1
Length = 554
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 170 QTKEYSGTEIMDLYATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVA 229
Q E ++I + ++ RP+ A+++N+ ++E S I LQ+KLH I R R +A
Sbjct: 84 QEFEVLNSDIKVIVEENETRPYVAFALVKNVLMDEFVLESMINLQEKLHWAIGRDRKKLA 143
Query: 230 IGTHDLDTIKGPFIYDAKPPSEIRFQPLN-QTKEYTGTEIMD 270
IG HD D +K PF Y EI+F PL + ++ T EI++
Sbjct: 144 IGIHDFDKVKAPFTYKEIKGDEIKFVPLGYEDEKMTPREIIE 185
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 24/133 (18%)
Query: 65 KGASEDVIYRIDVPANRYDLLCLEGL---YNGLM---------------------TSQIR 100
K + + + + +R D L +EGL + G M ++ R
Sbjct: 44 KNGKKQKMVQFSINPDRPDYLSVEGLARGFRGFMGITTGIQEFEVLNSDIKVIVEENETR 103
Query: 101 PHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPP 160
P+ A+++N+ ++E S I LQ+KLH I R R +AIG HD D +K PF Y
Sbjct: 104 PYVAFALVKNVLMDEFVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYKEIKG 163
Query: 161 SEIRFQPLNQTKE 173
EI+F PL E
Sbjct: 164 DEIKFVPLGYEDE 176
>sp|A9AA58|SYFB_METM6 Phenylalanine--tRNA ligase beta subunit OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=pheT PE=3
SV=1
Length = 554
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 186 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 245
++ RP+ A+++N+ ++E S I LQ+KLH I R R +AIG HD D +K PF Y
Sbjct: 100 NKTRPYVAFALVKNVLMDELVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYK 159
Query: 246 AKPPSEIRFQPLN-QTKEYTGTEIMD 270
EI+F PL + +E T EI++
Sbjct: 160 EIRGDEIKFVPLGYEDEEMTPREIIE 185
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 97 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 156
++ RP+ A+++N+ ++E S I LQ+KLH I R R +AIG HD D +K PF Y
Sbjct: 100 NKTRPYVAFALVKNVLMDELVLESMINLQEKLHWAIGRDRKKLAIGIHDFDKVKAPFTYK 159
Query: 157 AKPPSEIRFQPLN-QTKEYSGTEIMD 181
EI+F PL + +E + EI++
Sbjct: 160 EIRGDEIKFVPLGYEDEEMTPREIIE 185
>sp|Q0W0X4|SYFB_UNCMA Phenylalanine--tRNA ligase beta subunit OS=Uncultured methanogenic
archaeon RC-I GN=pheT PE=3 SV=1
Length = 553
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 21/145 (14%)
Query: 99 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI-YDA 157
+RP+ A++RN+ +E S + LQ+KLH RKR A+G HDL IKG I Y A
Sbjct: 95 VRPYVTGAIVRNVQFTDESIKSLMHLQEKLHGTFGRKRKKGAVGVHDLSKIKGREIHYRA 154
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAV-------AAVLRNITLNEERYASF 210
P ++F PL E+M L P + L I ++E SF
Sbjct: 155 VPGDSVKFVPLQS------DELMTLSDVLARHPKGIDYRYVLEGKNLMPIITDDEGIFSF 208
Query: 211 IELQDKLHQNICRKRTLVAIGTHDL 235
+ I KRT V + THDL
Sbjct: 209 PPI-------INSKRTEVTLNTHDL 226
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 175 SGTEIMDLYATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHD 234
SG +++ +RP+ A++RN+ +E S + LQ+KLH RKR A+G HD
Sbjct: 82 SGYKLIVNREVEPVRPYVTGAIVRNVQFTDESIKSLMHLQEKLHGTFGRKRKKGAVGVHD 141
Query: 235 LDTIKGPFI-YDAKPPSEIRFQPLNQTKEYTGTEIM 269
L IKG I Y A P ++F PL + T ++++
Sbjct: 142 LSKIKGREIHYRAVPGDSVKFVPLQSDELMTLSDVL 177
>sp|Q468N7|SYFB_METBF Phenylalanine--tRNA ligase beta subunit OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=pheT PE=3 SV=1
Length = 544
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 98 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+IRP AV+R I S ++LQ+ LH + R R V+IG HDL +K PF Y A
Sbjct: 92 RIRPFLGCAVVRGIKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDLSNVKPPFRYMA 151
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAV 193
P +F PL+ T++ S TEI++ + H V
Sbjct: 152 VDPG-FKFVPLDYTEKMSMTEILEKHPKGTRFAHLV 186
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 187 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+IRP AV+R I S ++LQ+ LH + R R V+IG HDL +K PF Y A
Sbjct: 92 RIRPFLGCAVVRGIKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDLSNVKPPFRYMA 151
Query: 247 KPPSEIRFQPLNQTKEYTGTEIMD 270
P +F PL+ T++ + TEI++
Sbjct: 152 VDPG-FKFVPLDYTEKMSMTEILE 174
>sp|Q971D8|SYFB_SULTO Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=pheT
PE=3 SV=1
Length = 540
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 37 LCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRI-DVPANRYDLLCLEGLYNGLM 95
L F +G+ + S K ++ KE G D ++ I +VP+
Sbjct: 52 LLFVYGI----IRSIKGLLKKELGEPRYSVKDTDYVFEIKEVPS---------------- 91
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
RP+A+AAV+ +I ++E I+ Q+KLH + RKR +AIG HDL I I
Sbjct: 92 ----RPYALAAVVEDIKFDDELLKELIQFQEKLHITVGRKRKKIAIGLHDLKKIDSKHII 147
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMD 181
+ +F PLN KE S EI++
Sbjct: 148 YTTVNLDYKFIPLNSDKEMSVREILE 173
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
RP+A+AAV+ +I ++E I+ Q+KLH + RKR +AIG HDL I I
Sbjct: 92 RPYALAAVVEDIKFDDELLKELIQFQEKLHITVGRKRKKIAIGLHDLKKIDSKHIIYTTV 151
Query: 249 PSEIRFQPLNQTKEYTGTEIMD 270
+ +F PLN KE + EI++
Sbjct: 152 NLDYKFIPLNSDKEMSVREILE 173
>sp|Q58508|SYFB_METJA Phenylalanine--tRNA ligase beta subunit OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pheT PE=3 SV=1
Length = 548
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 187 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+ RP+ A+++ + +++ S I LQ+KLH + R R VAIG HD D +K PF Y
Sbjct: 96 ETRPYIAMALVKGVIVDDYVLESIINLQEKLHWVMGRDRKKVAIGIHDADKVKPPFYYKE 155
Query: 247 KPPSEIRFQPLNQTKEYTGTEIMD 270
I+F PLN +E T EI++
Sbjct: 156 VSGDGIKFVPLNSDEEMTPREILE 179
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 98 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+ RP+ A+++ + +++ S I LQ+KLH + R R VAIG HD D +K PF Y
Sbjct: 96 ETRPYIAMALVKGVIVDDYVLESIINLQEKLHWVMGRDRKKVAIGIHDADKVKPPFYYKE 155
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMD 181
I+F PLN +E + EI++
Sbjct: 156 VSGDGIKFVPLNSDEEMTPREILE 179
>sp|Q8PTA5|SYFB_METMA Phenylalanine--tRNA ligase beta subunit OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pheT PE=3 SV=1
Length = 545
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 98 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+IRP AV+R + S ++LQ+ LH + R R V+IG HDL +K PF Y A
Sbjct: 92 KIRPFLGCAVVRGVKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDLKNVKPPFRYMA 151
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAVAA 195
P F PL+ T++ S TEI++ + H V+
Sbjct: 152 VDPG-FEFVPLDYTEKMSMTEILEKHPKGTRFAHLVSG 188
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 187 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+IRP AV+R + S ++LQ+ LH + R R V+IG HDL +K PF Y A
Sbjct: 92 KIRPFLGCAVVRGVKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDLKNVKPPFRYMA 151
Query: 247 KPPSEIRFQPLNQTKEYTGTEIMD 270
P F PL+ T++ + TEI++
Sbjct: 152 VDPG-FEFVPLDYTEKMSMTEILE 174
>sp|A2ST82|SYFB_METLZ Phenylalanine--tRNA ligase beta subunit OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pheT
PE=3 SV=1
Length = 540
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 186 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 245
+ IRP+ +AV+RN+ ++ S + LQ+ LH + R R VAIG HDLD I+GPF Y
Sbjct: 91 ANIRPYLGSAVIRNVHMDNAMIESLMGLQESLHWAVGRGRKKVAIGVHDLDKIEGPFSYI 150
Query: 246 AKPPSEIRFQPLNQTKEYTGTEIM 269
A + F PL+ E T EI+
Sbjct: 151 AA-DRKTTFVPLDYDVEMTMEEIL 173
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 97 SQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYD 156
+ IRP+ +AV+RN+ ++ S + LQ+ LH + R R VAIG HDLD I+GPF Y
Sbjct: 91 ANIRPYLGSAVIRNVHMDNAMIESLMGLQESLHWAVGRGRKKVAIGVHDLDKIEGPFSYI 150
Query: 157 AKPPSEIRFQPLNQTKEYSGTEIM 180
A + F PL+ E + EI+
Sbjct: 151 AA-DRKTTFVPLDYDVEMTMEEIL 173
>sp|B8GEX4|SYFB_METPE Phenylalanine--tRNA ligase beta subunit OS=Methanosphaerula
palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
GN=pheT PE=3 SV=1
Length = 546
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 98 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+IRP +AV+R ++L+EE S + LQ+ LH I R R +AIG HDLD I PF Y A
Sbjct: 92 EIRPFLGSAVIRGLSLSEEAIQSLMGLQEALHWAIGRGRKKMAIGLHDLDKITPPFRYCA 151
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAVAAVLRN--ITLNEERYASF 210
S F PL+ T+ + +++D + + H V R I E+R SF
Sbjct: 152 AEKSR-SFVPLDFTEPMTMEQMLDEHPKGRAYAHLVREHPRYPLIVDAEDRVCSF 205
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 184 ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI 243
A +IRP +AV+R ++L+EE S + LQ+ LH I R R +AIG HDLD I PF
Sbjct: 89 ALKEIRPFLGSAVIRGLSLSEEAIQSLMGLQEALHWAIGRGRKKMAIGLHDLDKITPPFR 148
Query: 244 YDAKPPSEIRFQPLNQTKEYTGTEIMD 270
Y A S F PL+ T+ T +++D
Sbjct: 149 YCAAEKSR-SFVPLDFTEPMTMEQMLD 174
>sp|B9LU47|SYFB_HALLT Phenylalanine--tRNA ligase beta subunit OS=Halorubrum lacusprofundi
(strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)
GN=pheT PE=3 SV=1
Length = 578
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 97/242 (40%), Gaps = 62/242 (25%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
+DEEF F GLE +G +++ + + + +R D L +EG
Sbjct: 21 SDEEFKEDLFGLGLEF-------------------EGETDEDLLQFEFAPDRLDRLSVEG 61
Query: 90 LYNGL-------------------MTSQI-------RPHAVAAVLRNITLNEERYASFIE 123
+ L T ++ RP+ AV+R + L+E S I+
Sbjct: 62 VARSLRYHYGDDRGVYVPETNDPEWTIEVDESVPDERPYVTGAVIRGVDLDEGALDSLIQ 121
Query: 124 LQDKLHQNICRKRTLVAIGTHDLDTIKG-PFIYDAKP--------PSEIRFQPLNQTKEY 174
LQ+KLH + R R AIG HDL +KG P ++P P + F PL+ E
Sbjct: 122 LQEKLHATMGRGRAKGAIGIHDLAMVKGAPLQEGSEPSITYRGVDPDGVSFVPLDANDEL 181
Query: 175 SGTEIMDLYATSQIRPHAVAAVLRNITLNEE-RYASFIELQDKLHQNICRKRTLVAIGTH 233
+ E++ + T Q V + R + +E SF + I KRT V G+
Sbjct: 182 TPNEVLAEHDTGQTYADLVEGLDRYPAIYDELGLFSFPPV-------INGKRTEVTTGSR 234
Query: 234 DL 235
+L
Sbjct: 235 EL 236
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKG-PFIYDAK 247
RP+ AV+R + L+E S I+LQ+KLH + R R AIG HDL +KG P ++
Sbjct: 98 RPYVTGAVIRGVDLDEGALDSLIQLQEKLHATMGRGRAKGAIGIHDLAMVKGAPLQEGSE 157
Query: 248 P--------PSEIRFQPLNQTKEYTGTEIM 269
P P + F PL+ E T E++
Sbjct: 158 PSITYRGVDPDGVSFVPLDANDELTPNEVL 187
>sp|Q8TPF7|SYFB_METAC Phenylalanine--tRNA ligase beta subunit OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pheT PE=3 SV=1
Length = 545
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 98 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+IRP AV+R + S ++LQ+ LH + R R V+IG HDL ++ PF Y A
Sbjct: 92 KIRPFLGCAVVRGVKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDLKNVQPPFRYMA 151
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAV 193
PS F PL+ T++ S T+I++ + H V
Sbjct: 152 VDPS-FEFVPLDYTEKMSMTDILEKHPKGTRFAHLV 186
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 187 QIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+IRP AV+R + S ++LQ+ LH + R R V+IG HDL ++ PF Y A
Sbjct: 92 KIRPFLGCAVVRGVKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDLKNVQPPFRYMA 151
Query: 247 KPPSEIRFQPLNQTKEYTGTEIMD 270
PS F PL+ T++ + T+I++
Sbjct: 152 VDPS-FEFVPLDYTEKMSMTDILE 174
>sp|A0B993|SYFB_METTP Phenylalanine--tRNA ligase beta subunit OS=Methanosaeta thermophila
(strain DSM 6194 / PT) GN=pheT PE=3 SV=1
Length = 539
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
+RP AV+R + + S + LQ+ LH + R R VAIG HD+ ++ PF Y
Sbjct: 91 VKSVRPIIGCAVVRGLRFTDPFIESLMSLQEDLHWGLGRNRRKVAIGVHDISRVRPPFRY 150
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAVAAVLRNITLNEERYASFIELQD 215
A+ P + RF PL+ + S EI++ + P VA R+I ER+ ++ D
Sbjct: 151 IAEDPDKRRFVPLDFDESMSMREILERH------PKGVA--YRHILDGFERFPLIVDADD 202
Query: 216 KL 217
+
Sbjct: 203 NV 204
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 184 ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI 243
+ +RP AV+R + + S + LQ+ LH + R R VAIG HD+ ++ PF
Sbjct: 90 SVKSVRPIIGCAVVRGLRFTDPFIESLMSLQEDLHWGLGRNRRKVAIGVHDISRVRPPFR 149
Query: 244 YDAKPPSEIRFQPLNQTKEYTGTEIMD 270
Y A+ P + RF PL+ + + EI++
Sbjct: 150 YIAEDPDKRRFVPLDFDESMSMREILE 176
>sp|Q8U260|SYFB_PYRFU Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pheT
PE=3 SV=1
Length = 556
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 188 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 247
IRP+ V AV+ + L+EE + I+LQ+K+ R+R VAIG D D +K P Y A
Sbjct: 100 IRPYGVYAVVEGLKLDEEALSQLIQLQEKVALTYGRRRREVAIGIFDFDKVKPPIYYRAA 159
Query: 248 PPSEIRFQPLNQTKEYTGTEIMD 270
+E +F PL ++E T EI++
Sbjct: 160 EKTE-KFVPLGYSEEMTLEEILE 181
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 32 EEFASLCFAFGLELDEVTSEK-QIISKEQGADNSK---GASEDVIYRIDVPANRYDLLCL 87
EE+ L ELD+V E +I K D ++ ++E V +I R+ L
Sbjct: 22 EEWEDLVLYAKCELDDVWEEDGKIYFKLDSKDTNRPDLWSAEGVARQI-----RWALGLA 76
Query: 88 EGL------------YNGLMTSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRK 135
+GL Y IRP+ V AV+ + L+EE + I+LQ+K+ R+
Sbjct: 77 KGLPKYEVEESDVVVYVDKKLRNIRPYGVYAVVEGLKLDEEALSQLIQLQEKVALTYGRR 136
Query: 136 RTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAV 193
R VAIG D D +K P Y A +E +F PL ++E + EI++ + + H +
Sbjct: 137 RREVAIGIFDFDKVKPPIYYRAAEKTE-KFVPLGYSEEMTLEEILEKHEKGREYGHLI 193
>sp|A1RYS1|SYFB_THEPD Phenylalanine--tRNA ligase beta subunit OS=Thermofilum pendens
(strain Hrk 5) GN=pheT PE=3 SV=1
Length = 556
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
RP+A AV+R ++L++E ++LQ+K+H R R V+IG +DLD IK P Y A
Sbjct: 94 RPYAFFAVVRGVSLDDEAIRQLMQLQEKVHLTYGRNRRKVSIGLYDLDGIKLPVRYVAAS 153
Query: 249 PSEIRFQPLNQTKEYTGTEIMD 270
P E R +PL E T E+++
Sbjct: 154 P-ETRMKPLGFAIEMTLREVLE 174
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 100 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 159
RP+A AV+R ++L++E ++LQ+K+H R R V+IG +DLD IK P Y A
Sbjct: 94 RPYAFFAVVRGVSLDDEAIRQLMQLQEKVHLTYGRNRRKVSIGLYDLDGIKLPVRYVAAS 153
Query: 160 PSEIRFQPLNQTKEYSGTEIMD 181
P E R +PL E + E+++
Sbjct: 154 P-ETRMKPLGFAIEMTLREVLE 174
>sp|O73984|SYFB_PYRHO Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pheT PE=1 SV=1
Length = 556
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 188 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 247
IRP+ V A++ + L+E+ + I+LQ+K+ R+R VAIG D D IK P Y A
Sbjct: 100 IRPYGVYAIVEGLRLDEDSLSQMIQLQEKIALTFGRRRREVAIGIFDFDKIKPPIYYKAA 159
Query: 248 PPSEIRFQPLNQTKEYTGTEIMD 270
+E +F PL +E T EI++
Sbjct: 160 EKTE-KFAPLGYKEEMTLEEILE 181
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 99 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 158
IRP+ V A++ + L+E+ + I+LQ+K+ R+R VAIG D D IK P Y A
Sbjct: 100 IRPYGVYAIVEGLRLDEDSLSQMIQLQEKIALTFGRRRREVAIGIFDFDKIKPPIYYKAA 159
Query: 159 PPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAV 193
+E +F PL +E + EI++ + + H +
Sbjct: 160 EKTE-KFAPLGYKEEMTLEEILEKHEKGREYGHLI 193
>sp|C3N028|SYFB_SULIA Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus islandicus
(strain M.16.27) GN=pheT PE=3 SV=1
Length = 545
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 27/131 (20%)
Query: 75 IDVPANRYDLLCLEGL---YNGLMTSQI---------------------RPHAVAAVLRN 110
I++ A+R DLL +G+ GL+ ++ RP+A+AAV+ N
Sbjct: 43 IEINADRLDLLSSDGIARSIKGLLEKELGEAKYNVTDTEYTLIVDNVRTRPYALAAVVYN 102
Query: 111 ITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQ 170
++ E I+ Q+KLH I RKR VAIG HDL + I + P +F PL +
Sbjct: 103 AKIDLEE---LIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEVPLSYKFVPLYE 159
Query: 171 TKEYSGTEIMD 181
KE + +EI++
Sbjct: 160 NKELTISEILE 170
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
RP+A+AAV+ N ++ E I+ Q+KLH I RKR VAIG HDL + I +
Sbjct: 92 RPYALAAVVYNAKIDLEE---LIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEV 148
Query: 249 PSEIRFQPLNQTKEYTGTEIMD 270
P +F PL + KE T +EI++
Sbjct: 149 PLSYKFVPLYENKELTISEILE 170
>sp|C3MYY0|SYFB_SULIM Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus islandicus
(strain M.14.25 / Kamchatka #1) GN=pheT PE=3 SV=1
Length = 545
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 27/131 (20%)
Query: 75 IDVPANRYDLLCLEGL---YNGLMTSQI---------------------RPHAVAAVLRN 110
I++ A+R DLL +G+ GL+ ++ RP+A+AAV+ N
Sbjct: 43 IEINADRLDLLSSDGIARAIKGLLEKELGEAKYNVTDTEYTLIVDNVRTRPYALAAVVYN 102
Query: 111 ITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQ 170
++ E I+ Q+KLH I RKR VAIG HDL + I + P +F PL +
Sbjct: 103 AKIDLEE---LIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEVPLSYKFVPLYE 159
Query: 171 TKEYSGTEIMD 181
KE + +EI++
Sbjct: 160 NKELTISEILE 170
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
RP+A+AAV+ N ++ E I+ Q+KLH I RKR VAIG HDL + I +
Sbjct: 92 RPYALAAVVYNAKIDLEE---LIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEV 148
Query: 249 PSEIRFQPLNQTKEYTGTEIMD 270
P +F PL + KE T +EI++
Sbjct: 149 PLSYKFVPLYENKELTISEILE 170
>sp|C4KJ68|SYFB_SULIK Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus islandicus
(strain M.16.4 / Kamchatka #3) GN=pheT PE=3 SV=1
Length = 545
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 27/131 (20%)
Query: 75 IDVPANRYDLLCLEGL---YNGLMTSQI---------------------RPHAVAAVLRN 110
I++ A+R DLL +G+ GL+ ++ RP+A+AAV+ N
Sbjct: 43 IEINADRLDLLSSDGIARAIKGLLEKELGEAKYNVTDTEYTLIVDNVRTRPYALAAVVYN 102
Query: 111 ITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQ 170
++ E I+ Q+KLH I RKR VAIG HDL + I + P +F PL +
Sbjct: 103 AKIDLEE---LIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEVPLSYKFVPLYE 159
Query: 171 TKEYSGTEIMD 181
KE + +EI++
Sbjct: 160 NKELTISEILE 170
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
RP+A+AAV+ N ++ E I+ Q+KLH I RKR VAIG HDL + I +
Sbjct: 92 RPYALAAVVYNAKIDLEE---LIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEV 148
Query: 249 PSEIRFQPLNQTKEYTGTEIMD 270
P +F PL + KE T +EI++
Sbjct: 149 PLSYKFVPLYENKELTISEILE 170
>sp|B6YTJ3|SYFB_THEON Phenylalanine--tRNA ligase beta subunit OS=Thermococcus onnurineus
(strain NA1) GN=pheT PE=3 SV=1
Length = 572
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 21 LPSTVAGHGTDEEFASLCFAFGLELDEVTSEK-QIISKEQGADNSK---GASEDVIYRID 76
L V T EE+ L ELD+V E QI K D ++ ++E + +I
Sbjct: 11 LERLVGKSFTVEEWEDLFLYAKCELDDVWEENGQIYFKADSKDTNRPDLWSAEGIARQI- 69
Query: 77 VPANRYDLLCLEGL------------YNGLMTSQIRPHAVAAVLRNITLNEERYASFIEL 124
R+ L +GL Y IRP+ V A++ ++L++E I L
Sbjct: 70 ----RWALGMAKGLPRYEVEKSDVVVYVDEKLKDIRPYGVYAIVEGLSLDDEALKQMINL 125
Query: 125 QDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYA 184
Q+K+ R+R VAIG D D +K P Y A +E +F PL ++ S EI++ +
Sbjct: 126 QEKVALTFGRRRREVAIGIFDFDKVKPPIYYRAAEKTE-KFVPLGFEEKMSLEEILEKHE 184
Query: 185 TSQIRPHAV 193
+ H +
Sbjct: 185 KGKEYGHLI 193
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 188 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 247
IRP+ V A++ ++L++E I LQ+K+ R+R VAIG D D +K P Y A
Sbjct: 100 IRPYGVYAIVEGLSLDDEALKQMINLQEKVALTFGRRRREVAIGIFDFDKVKPPIYYRAA 159
Query: 248 PPSEIRFQPLNQTKEYTGTEIMD 270
+E +F PL ++ + EI++
Sbjct: 160 EKTE-KFVPLGFEEKMSLEEILE 181
>sp|C3MJ88|SYFB_SULIL Phenylalanine--tRNA ligase beta subunit OS=Sulfolobus islandicus
(strain L.S.2.15 / Lassen #1) GN=pheT PE=3 SV=1
Length = 545
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 75 IDVPANRYDLLCLEGL---YNGLMTSQI---------------------RPHAVAAVLRN 110
I++ A+R DLL +G+ GL+ ++ RP+A+AA++ N
Sbjct: 43 IEINADRLDLLSSDGIARAIKGLLEKELGEAKYNVTDTEYTLIVDNVRTRPYALAAIVYN 102
Query: 111 ITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQ 170
++ E I+ Q+KLH I RKR VAIG HDL + I + P +F PL
Sbjct: 103 AKIDLEE---LIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEVPLSYKFVPLYG 159
Query: 171 TKEYSGTEIMD 181
KE + +EI++
Sbjct: 160 NKELTISEILE 170
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
RP+A+AA++ N ++ E I+ Q+KLH I RKR VAIG HDL + I +
Sbjct: 92 RPYALAAIVYNAKIDLEE---LIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEV 148
Query: 249 PSEIRFQPLNQTKEYTGTEIMD 270
P +F PL KE T +EI++
Sbjct: 149 PLSYKFVPLYGNKELTISEILE 170
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,915,777
Number of Sequences: 539616
Number of extensions: 3965465
Number of successful extensions: 9183
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8975
Number of HSP's gapped (non-prelim): 170
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)