Your job contains 1 sequence.
>psy14335
MSRSDGLTDLRLSDLLRTLVLPSTVAGHGTDEEFASLCFAFGLELDEVTSEKQIISKEQG
ADNSKGASEDVIYRIDVPANRYDLLCLEGLYNGLMTSQIRPHAVAAVLRNITLNEERYAS
FIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIM
DLYATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKG
PFIYDAKPPSEIRFQPLNQTKEYTGTEIMDLYA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14335
(273 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-021206-2 - symbol:farsb "phenylalanyl-tRNA ... 357 2.9e-57 2
UNIPROTKB|F6XQ20 - symbol:FARSB "Uncharacterized protein"... 345 1.1e-56 2
UNIPROTKB|E2R6K4 - symbol:FARSB "Uncharacterized protein"... 345 1.1e-56 2
UNIPROTKB|Q5ZJ61 - symbol:FARSB "Uncharacterized protein"... 351 1.4e-56 2
FB|FBgn0039175 - symbol:CG5706 species:7227 "Drosophila m... 354 4.5e-56 2
UNIPROTKB|A8E4P2 - symbol:FARSB "Uncharacterized protein"... 342 1.5e-55 2
MGI|MGI:1346035 - symbol:Farsb "phenylalanyl-tRNA synthet... 341 1.6e-55 2
RGD|1303210 - symbol:Farsb "phenylalanyl-tRNA synthetase,... 341 2.5e-55 2
UNIPROTKB|Q9NSD9 - symbol:FARSB "Phenylalanine--tRNA liga... 342 5.2e-55 2
WB|WBGene00001498 - symbol:fars-3 species:6239 "Caenorhab... 340 1.0e-47 2
TAIR|locus:2030290 - symbol:AT1G72550 species:3702 "Arabi... 311 1.4e-45 2
DICTYBASE|DDB_G0277303 - symbol:phesB "phenylalanine-tRNA... 289 6.2e-42 2
ASPGD|ASPL0000011475 - symbol:AN4086 species:162425 "Emer... 314 9.5e-39 2
UNIPROTKB|F5H6Y1 - symbol:FARSB "Phenylalanine--tRNA liga... 342 4.2e-31 1
SGD|S000004050 - symbol:FRS1 "Beta subunit of cytoplasmic... 347 4.7e-31 1
UNIPROTKB|F1SR70 - symbol:LOC100524650 "Uncharacterized p... 336 1.8e-30 1
UNIPROTKB|J9P9M6 - symbol:J9P9M6 "Uncharacterized protein... 332 4.9e-30 1
POMBASE|SPAC23A1.12c - symbol:frs1 "phenylalanine-tRNA li... 324 1.5e-28 1
CGD|CAL0002521 - symbol:FRS1 species:5476 "Candida albica... 309 6.9e-27 1
UNIPROTKB|Q5A993 - symbol:FRS1 "Putative uncharacterized ... 309 6.9e-27 1
UNIPROTKB|I3L8P7 - symbol:LOC100738149 "Uncharacterized p... 256 5.5e-22 1
GENEDB_PFALCIPARUM|PF11_0051 - symbol:PF11_0051 "phenylal... 210 5.0e-21 2
UNIPROTKB|Q8IIW2 - symbol:PF11_0051 "Phenylalanyl-tRNA sy... 210 5.0e-21 2
UNIPROTKB|F1P3V4 - symbol:F1P3V4 "Uncharacterized protein... 175 3.3e-11 1
WB|WBGene00021828 - symbol:Y54E10A.6 species:6239 "Caenor... 174 3.7e-11 1
UNIPROTKB|F1PYM5 - symbol:LRRC47 "Uncharacterized protein... 172 8.9e-11 1
RGD|1308599 - symbol:Lrrc47 "leucine rich repeat containi... 171 1.2e-10 1
MGI|MGI:1920196 - symbol:Lrrc47 "leucine rich repeat cont... 170 1.6e-10 1
UNIPROTKB|Q8N1G4 - symbol:LRRC47 "Leucine-rich repeat-con... 166 5.5e-10 1
ZFIN|ZDB-GENE-060503-289 - symbol:lrrc47 "leucine rich re... 164 9.8e-10 1
UNIPROTKB|A6QR01 - symbol:LRRC47 "LRRC47 protein" species... 163 1.4e-09 1
>ZFIN|ZDB-GENE-021206-2 [details] [associations]
symbol:farsb "phenylalanyl-tRNA synthetase, beta
subunit" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 ZFIN:ZDB-GENE-021206-2 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 GO:GO:0003723 eggNOG:COG0072
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 HOGENOM:HOG000105095
KO:K01890 Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 CTD:10056 HOVERGEN:HBG009523 OrthoDB:EOG4FXR74
EMBL:BC085625 IPI:IPI00500527 RefSeq:NP_001007769.1
UniGene:Dr.75498 ProteinModelPortal:Q5RKM6 STRING:Q5RKM6
GeneID:493608 KEGG:dre:493608 InParanoid:Q5RKM6 NextBio:20865418
ArrayExpress:Q5RKM6 Uniprot:Q5RKM6
Length = 590
Score = 357 (130.7 bits), Expect = 2.9e-57, Sum P(2) = 2.9e-57
Identities = 67/88 (76%), Positives = 76/88 (86%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T+ +RP AVAAVLRNIT +ERY SFIELQ+KLHQNICRKRTLVAIGTHDLDTI GPF Y
Sbjct: 116 TASVRPFAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRTLVAIGTHDLDTISGPFTY 175
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
AK P EIRF+PLNQ++E+T TE+M LY
Sbjct: 176 TAKAPGEIRFKPLNQSQEFTATELMSLY 203
Score = 355 (130.0 bits), Expect = 4.9e-57, Sum P(2) = 4.9e-57
Identities = 68/95 (71%), Positives = 80/95 (84%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T+ +RP AVAAVLRNIT +ERY SFIELQ+KLHQNICRKRTLVAIGTHDLDTI GPF Y
Sbjct: 116 TASVRPFAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRTLVAIGTHDLDTISGPFTY 175
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYAT-SQIR 189
AK P EIRF+PLNQ++E++ TE+M LY + S +R
Sbjct: 176 TAKAPGEIRFKPLNQSQEFTATELMSLYKSDSHLR 210
Score = 259 (96.2 bits), Expect = 2.9e-57, Sum P(2) = 2.9e-57
Identities = 49/65 (75%), Positives = 56/65 (86%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEK IIS+EQG D ++GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKDIISREQGDDKAEGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGL 94
L GL
Sbjct: 80 LVRGL 84
>UNIPROTKB|F6XQ20 [details] [associations]
symbol:FARSB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 GeneTree:ENSGT00530000063489 KO:K01890 OMA:FFPNRPD
Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 CTD:10056 EMBL:AAEX03018188
Ensembl:ENSCAFT00000025570 RefSeq:XP_536085.2 GeneID:478926
KEGG:cfa:478926 Uniprot:F6XQ20
Length = 589
Score = 345 (126.5 bits), Expect = 7.4e-31, P = 7.4e-31
Identities = 64/96 (66%), Positives = 79/96 (82%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T++IRP+AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKIRPYAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK PS+I+F+PLN+TKEY+ E+M++Y T H
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKH 209
Score = 343 (125.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 63/88 (71%), Positives = 77/88 (87%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T++IRP+AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKIRPYAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
AK PS+I+F+PLN+TKEYT E+M++Y
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIY 201
Score = 269 (99.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 55/87 (63%), Positives = 66/87 (75%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEK+IISKEQG + ++GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAEGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLMTSQIRPHAVAAVLRNITLNEE 116
L GL + R A V + +T N E
Sbjct: 80 LVRGLQVFKER--IKAPVYKRVTPNGE 104
>UNIPROTKB|E2R6K4 [details] [associations]
symbol:FARSB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 Gene3D:3.30.56.20 TIGRFAMs:TIGR00471
InterPro:IPR020825 SUPFAM:SSF56037 Ensembl:ENSCAFT00000025570
Uniprot:E2R6K4
Length = 593
Score = 345 (126.5 bits), Expect = 7.6e-31, P = 7.6e-31
Identities = 64/96 (66%), Positives = 79/96 (82%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T++IRP+AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKIRPYAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK PS+I+F+PLN+TKEY+ E+M++Y T H
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKH 209
Score = 343 (125.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 63/88 (71%), Positives = 77/88 (87%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T++IRP+AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKIRPYAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
AK PS+I+F+PLN+TKEYT E+M++Y
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIY 201
Score = 269 (99.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 55/87 (63%), Positives = 66/87 (75%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEK+IISKEQG + ++GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAEGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLMTSQIRPHAVAAVLRNITLNEE 116
L GL + R A V + +T N E
Sbjct: 80 LVRGLQVFKER--IKAPVYKRVTPNGE 104
>UNIPROTKB|Q5ZJ61 [details] [associations]
symbol:FARSB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 eggNOG:COG0072 SUPFAM:SSF46955
GO:GO:0004826 GO:GO:0006432 GeneTree:ENSGT00530000063489
HOGENOM:HOG000105095 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 InterPro:IPR020825 SUPFAM:SSF56037 CTD:10056
HOVERGEN:HBG009523 OrthoDB:EOG4FXR74 EMBL:AADN02024149
EMBL:AJ720573 IPI:IPI00593920 RefSeq:NP_001006543.1
UniGene:Gga.6269 STRING:Q5ZJ61 Ensembl:ENSGALT00000008412
GeneID:424812 KEGG:gga:424812 InParanoid:Q5ZJ61 NextBio:20827088
Uniprot:Q5ZJ61
Length = 589
Score = 351 (128.6 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 67/95 (70%), Positives = 82/95 (86%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T +IRP+AVAAVLRNIT +ERY SFI+LQ+KLHQNICR+R LVAIGTHDLDTI GPF +
Sbjct: 115 TVKIRPYAVAAVLRNITFTKERYDSFIDLQEKLHQNICRRRALVAIGTHDLDTISGPFTF 174
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYAT-SQIR 189
AK PSEI+F+PLNQ++EY+ ++IMDLY T S +R
Sbjct: 175 TAKAPSEIKFKPLNQSQEYTASQIMDLYRTDSHLR 209
Score = 351 (128.6 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 68/109 (62%), Positives = 87/109 (79%)
Query: 164 RFQPLNQTKEYSGTEIMDLYATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICR 223
R++ + K G +++ T +IRP+AVAAVLRNIT +ERY SFI+LQ+KLHQNICR
Sbjct: 95 RYEKIIPAKG-EGQKMIITEETVKIRPYAVAAVLRNITFTKERYDSFIDLQEKLHQNICR 153
Query: 224 KRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
+R LVAIGTHDLDTI GPF + AK PSEI+F+PLNQ++EYT ++IMDLY
Sbjct: 154 RRALVAIGTHDLDTISGPFTFTAKAPSEIKFKPLNQSQEYTASQIMDLY 202
Score = 259 (96.2 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 51/71 (71%), Positives = 57/71 (80%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDEVTSEK IISKE+G ++GASE V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFNDLCFEFGLELDEVTSEKDIISKEKGEGKAEGASETVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLMTSQIR 100
L GL + R
Sbjct: 80 LVRGLQVFKER 90
>FB|FBgn0039175 [details] [associations]
symbol:CG5706 species:7227 "Drosophila melanogaster"
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=ISS]
[GO:0009328 "phenylalanine-tRNA ligase complex" evidence=ISS]
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=ISS]
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 GO:GO:0003723 eggNOG:COG0072
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GeneTree:ENSGT00530000063489 KO:K01890 OMA:FFPNRPD
Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 EMBL:AY052086 RefSeq:NP_651237.1 UniGene:Dm.1314
ProteinModelPortal:Q9VCA5 SMR:Q9VCA5 STRING:Q9VCA5 PaxDb:Q9VCA5
PRIDE:Q9VCA5 EnsemblMetazoa:FBtr0084637 GeneID:42888
KEGG:dme:Dmel_CG5706 UCSC:CG5706-RA FlyBase:FBgn0039175
InParanoid:Q9VCA5 OrthoDB:EOG45QFVD PhylomeDB:Q9VCA5
GenomeRNAi:42888 NextBio:831099 Bgee:Q9VCA5 GermOnline:CG5706
Uniprot:Q9VCA5
Length = 589
Score = 354 (129.7 bits), Expect = 4.5e-56, Sum P(2) = 4.5e-56
Identities = 65/97 (67%), Positives = 84/97 (86%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T+QIRP+AVAAVLRN+T + Y SFI+LQDKLHQNICRKRTLVAIGTHDLDT++GPF Y
Sbjct: 114 TAQIRPYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFSY 173
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYAT-SQIRPH 191
+A P +I+F+PLNQTKE +G+E+MD Y+T +Q++ +
Sbjct: 174 EALAPDQIKFKPLNQTKEMTGSELMDFYSTHAQLKQY 210
Score = 353 (129.3 bits), Expect = 5.8e-56, Sum P(2) = 5.8e-56
Identities = 67/108 (62%), Positives = 87/108 (80%)
Query: 167 PLNQTKEYSGTEIMDLY-ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKR 225
P Q E + +++ + +T+QIRP+AVAAVLRN+T + Y SFI+LQDKLHQNICRKR
Sbjct: 95 PKFQFVELAKRQVLKIDPSTAQIRPYAVAAVLRNVTFTQASYNSFIDLQDKLHQNICRKR 154
Query: 226 TLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYTGTEIMDLYA 273
TLVAIGTHDLDT++GPF Y+A P +I+F+PLNQTKE TG+E+MD Y+
Sbjct: 155 TLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEMTGSELMDFYS 202
Score = 251 (93.4 bits), Expect = 4.5e-56, Sum P(2) = 4.5e-56
Identities = 48/70 (68%), Positives = 58/70 (82%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQG-ADNSKGASEDVIYRIDVPANRYDLLCLE 88
TD+EF LCFAFGLELDEVT+EKQ+++KEQG + ASE++IYRID+PANRYDLLCLE
Sbjct: 20 TDDEFQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASEEIIYRIDIPANRYDLLCLE 79
Query: 89 GLYNGLMTSQ 98
GL GL+ Q
Sbjct: 80 GLVTGLLVFQ 89
>UNIPROTKB|A8E4P2 [details] [associations]
symbol:FARSB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 eggNOG:COG0072 SUPFAM:SSF46955
GO:GO:0004826 GO:GO:0006432 GeneTree:ENSGT00530000063489
HOGENOM:HOG000105095 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 InterPro:IPR020825 SUPFAM:SSF56037
HOVERGEN:HBG009523 OrthoDB:EOG4FXR74 EMBL:DAAA02006007
EMBL:BC151418 IPI:IPI00708080 RefSeq:NP_001098491.1
UniGene:Bt.89225 STRING:A8E4P2 Ensembl:ENSBTAT00000015473
GeneID:788792 KEGG:bta:788792 InParanoid:A8E4P2 NextBio:20929323
Uniprot:A8E4P2
Length = 589
Score = 342 (125.4 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 63/96 (65%), Positives = 79/96 (82%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T++IRP+AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKIRPYAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK PS+I+F+PLN++KEY+ E+M++Y T H
Sbjct: 174 TAKKPSDIKFKPLNKSKEYTACELMNIYKTDNQLKH 209
Score = 342 (125.4 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 68/115 (59%), Positives = 86/115 (74%)
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAVAAVLRNITLNEERYASFIELQDKL 217
K P R P + ++ TE T++IRP+AVAAVLRNI ++RY SFIELQ+KL
Sbjct: 92 KTPMYKRVMPKGEIQKLIITE-----ETAKIRPYAVAAVLRNIKFTKDRYDSFIELQEKL 146
Query: 218 HQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
HQNICRKR LVAIGTHDLDT+ GPF Y AK PS+I+F+PLN++KEYT E+M++Y
Sbjct: 147 HQNICRKRALVAIGTHDLDTLSGPFTYTAKKPSDIKFKPLNKSKEYTACELMNIY 201
Score = 259 (96.2 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 50/71 (70%), Positives = 58/71 (81%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEK+IISKEQG + + GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAHGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLMTSQIR 100
L GL + R
Sbjct: 80 LVRGLQVFKER 90
>MGI|MGI:1346035 [details] [associations]
symbol:Farsb "phenylalanyl-tRNA synthetase, beta subunit"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA
ligase activity" evidence=IEA] [GO:0004826 "phenylalanine-tRNA
ligase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 MGI:MGI:1346035
GO:GO:0005524 GO:GO:0005737 GO:GO:0000287 GO:GO:0003723
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GeneTree:ENSGT00530000063489 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 CTD:10056 HOVERGEN:HBG009523 OrthoDB:EOG4FXR74
EMBL:AF123263 EMBL:AK010271 EMBL:AK045432 EMBL:BC016428
IPI:IPI00322828 RefSeq:NP_035941.2 UniGene:Mm.28922
UniGene:Mm.447792 ProteinModelPortal:Q9WUA2 SMR:Q9WUA2
STRING:Q9WUA2 PhosphoSite:Q9WUA2 PaxDb:Q9WUA2 PRIDE:Q9WUA2
Ensembl:ENSMUST00000068333 Ensembl:ENSMUST00000170217 GeneID:23874
KEGG:mmu:23874 InParanoid:Q9CWZ8 NextBio:303591 Bgee:Q9WUA2
CleanEx:MM_FARSB Genevestigator:Q9WUA2
GermOnline:ENSMUSG00000026245 Uniprot:Q9WUA2
Length = 589
Score = 341 (125.1 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 63/96 (65%), Positives = 78/96 (81%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T+++RP AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK PS+I+F+PLN+TKEY+ E+M++Y T H
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKH 209
Score = 339 (124.4 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 62/88 (70%), Positives = 76/88 (86%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T+++RP AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
AK PS+I+F+PLN+TKEYT E+M++Y
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIY 201
Score = 260 (96.6 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 51/71 (71%), Positives = 58/71 (81%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEKQIISKEQG ++GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKQIISKEQGHGKAQGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLMTSQIR 100
L GL + R
Sbjct: 80 LARGLQVFKER 90
>RGD|1303210 [details] [associations]
symbol:Farsb "phenylalanyl-tRNA synthetase, beta subunit"
species:10116 "Rattus norvegicus" [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 RGD:1303210
GO:GO:0005524 GO:GO:0005737 GO:GO:0000287 GO:GO:0003723
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GeneTree:ENSGT00530000063489 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 CTD:10056 HOVERGEN:HBG009523 OrthoDB:EOG4FXR74
EMBL:BC079364 IPI:IPI00202379 RefSeq:NP_001004252.1
UniGene:Rn.17054 IntAct:Q68FT7 STRING:Q68FT7
Ensembl:ENSRNOT00000019685 GeneID:301544 KEGG:rno:301544
UCSC:RGD:1303210 InParanoid:Q68FT7 NextBio:648921
Genevestigator:Q68FT7 Uniprot:Q68FT7
Length = 589
Score = 341 (125.1 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 63/96 (65%), Positives = 78/96 (81%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T+++RP AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK PS+I+F+PLN+TKEY+ E+M++Y T H
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKH 209
Score = 340 (124.7 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 68/115 (59%), Positives = 85/115 (73%)
Query: 158 KPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAVAAVLRNITLNEERYASFIELQDKL 217
K P R P + ++ TE T+++RP AVAAVLRNI ++RY SFIELQ+KL
Sbjct: 92 KAPVYKRVMPKGEIQKLIITE-----ETAKVRPFAVAAVLRNIKFTKDRYDSFIELQEKL 146
Query: 218 HQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
HQNICRKR LVAIGTHDLDT+ GPF Y AK PS+I+F+PLN+TKEYT E+M++Y
Sbjct: 147 HQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIY 201
Score = 258 (95.9 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 51/71 (71%), Positives = 58/71 (81%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEKQIISKEQG ++GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKQIISKEQGNVKAQGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLMTSQIR 100
L GL + R
Sbjct: 80 LARGLQVFKER 90
>UNIPROTKB|Q9NSD9 [details] [associations]
symbol:FARSB "Phenylalanine--tRNA ligase beta subunit"
species:9606 "Homo sapiens" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR004531
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483 SMART:SM00873
SMART:SM00874 GO:GO:0005829 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 GO:GO:0006418 eggNOG:COG0072 DrugBank:DB00120
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 EMBL:AC104772 PDB:3L4G
PDBsum:3L4G BRENDA:6.1.1.20 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 EMBL:D84430 EMBL:AF042346 EMBL:AF161521
EMBL:AC097461 EMBL:BC017783 IPI:IPI00300074 RefSeq:NP_005678.3
UniGene:Hs.471452 ProteinModelPortal:Q9NSD9 SMR:Q9NSD9
DIP:DIP-32869N IntAct:Q9NSD9 STRING:Q9NSD9 PhosphoSite:Q9NSD9
DMDM:296452943 PaxDb:Q9NSD9 PRIDE:Q9NSD9 Ensembl:ENST00000281828
GeneID:10056 KEGG:hsa:10056 UCSC:uc002vne.1 CTD:10056
GeneCards:GC02M223435 H-InvDB:HIX0002878 HGNC:HGNC:17800
HPA:HPA036678 MIM:609690 neXtProt:NX_Q9NSD9 PharmGKB:PA162388068
HOVERGEN:HBG009523 InParanoid:Q9NSD9 OrthoDB:EOG4FXR74
PhylomeDB:Q9NSD9 ChiTaRS:FARSB GenomeRNAi:10056 NextBio:37993
ArrayExpress:Q9NSD9 Bgee:Q9NSD9 CleanEx:HS_FARSB
Genevestigator:Q9NSD9 GermOnline:ENSG00000116120 Uniprot:Q9NSD9
Length = 589
Score = 342 (125.4 bits), Expect = 5.2e-55, Sum P(2) = 5.2e-55
Identities = 64/96 (66%), Positives = 78/96 (81%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T++IRP AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK PS+I+F+PLN+TKEY+ E+M++Y T H
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKH 209
Score = 340 (124.7 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
Identities = 63/88 (71%), Positives = 76/88 (86%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T++IRP AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 114 TAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 173
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
AK PS+I+F+PLN+TKEYT E+M++Y
Sbjct: 174 TAKRPSDIKFKPLNKTKEYTACELMNIY 201
Score = 254 (94.5 bits), Expect = 5.2e-55, Sum P(2) = 5.2e-55
Identities = 50/71 (70%), Positives = 57/71 (80%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
TDEEF LCF FGLELDE+TSEK+IISKEQG + GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLMTSQIR 100
L GL + R
Sbjct: 80 LVRGLQVFKER 90
>WB|WBGene00001498 [details] [associations]
symbol:fars-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR004531
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483 SMART:SM00873
SMART:SM00874 GO:GO:0005524 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0002119 GO:GO:0000287 GO:GO:0000003
GO:GO:0003723 eggNOG:COG0072 EMBL:Z50044 SUPFAM:SSF46955
GO:GO:0004826 GO:GO:0006432 GeneTree:ENSGT00530000063489
HOGENOM:HOG000105095 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 Gene3D:3.50.40.10 InterPro:IPR020825
SUPFAM:SSF56037 PIR:T21245 RefSeq:NP_495785.1
ProteinModelPortal:Q19713 SMR:Q19713 IntAct:Q19713 STRING:Q19713
World-2DPAGE:0011:Q19713 PaxDb:Q19713 EnsemblMetazoa:F22B5.9.1
EnsemblMetazoa:F22B5.9.2 GeneID:174351 KEGG:cel:CELE_F22B5.9
UCSC:F22B5.9 CTD:174351 WormBase:F22B5.9 InParanoid:Q19713
NextBio:883668 Uniprot:Q19713
Length = 591
Score = 340 (124.7 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
Identities = 71/129 (55%), Positives = 95/129 (73%)
Query: 75 IDVPANRYDLLCLEGLYNGLM---TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQN 131
I PA +Y + GL ++ T+Q+RP V AVLR+I+ + + YASFI+LQDKLHQN
Sbjct: 91 IPSPAYKYADVPKTGLQKIIVKKETAQVRPFVVGAVLRDISFDADSYASFIDLQDKLHQN 150
Query: 132 ICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYAT-SQIRP 190
ICRKRTLVAIGTHDLDTI+GPF Y A+ P +I+F+PLNQTKEY+ E+M LY+T S ++
Sbjct: 151 ICRKRTLVAIGTHDLDTIQGPFEYRAEAPKDIKFKPLNQTKEYTAEELMTLYSTDSHLK- 209
Query: 191 HAVAAVLRN 199
A +++N
Sbjct: 210 -AYLPIIQN 217
Score = 335 (123.0 bits), Expect = 3.7e-47, Sum P(2) = 3.7e-47
Identities = 62/89 (69%), Positives = 76/89 (85%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T+Q+RP V AVLR+I+ + + YASFI+LQDKLHQNICRKRTLVAIGTHDLDTI+GPF Y
Sbjct: 115 TAQVRPFVVGAVLRDISFDADSYASFIDLQDKLHQNICRKRTLVAIGTHDLDTIQGPFEY 174
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLYA 273
A+ P +I+F+PLNQTKEYT E+M LY+
Sbjct: 175 RAEAPKDIKFKPLNQTKEYTAEELMTLYS 203
Score = 187 (70.9 bits), Expect = 1.0e-47, Sum P(2) = 1.0e-47
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
+++EF LCF +GLELDE+TSEK + KEQG + ++ +Y+ID+PANRYDLL +EG
Sbjct: 20 SEKEFDELCFEYGLELDEITSEKAAVEKEQGTRAASDLNDQEVYKIDIPANRYDLLSVEG 79
Query: 90 L 90
L
Sbjct: 80 L 80
>TAIR|locus:2030290 [details] [associations]
symbol:AT1G72550 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 EMBL:AC010926 eggNOG:COG0072 SUPFAM:SSF46955
GO:GO:0004826 GO:GO:0006432 EMBL:AY062707 EMBL:AY128795
IPI:IPI00537750 PIR:H96749 RefSeq:NP_177399.1 UniGene:At.27258
ProteinModelPortal:Q9SGE9 SMR:Q9SGE9 STRING:Q9SGE9 PaxDb:Q9SGE9
PRIDE:Q9SGE9 EnsemblPlants:AT1G72550.1 GeneID:843587
KEGG:ath:AT1G72550 GeneFarm:2620 TAIR:At1g72550
HOGENOM:HOG000105095 InParanoid:Q9SGE9 KO:K01890 OMA:FFPNRPD
PhylomeDB:Q9SGE9 ProtClustDB:PLN02265 Genevestigator:Q9SGE9
Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 Uniprot:Q9SGE9
Length = 598
Score = 311 (114.5 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 56/88 (63%), Positives = 71/88 (80%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
TS+IRP V AVLR +T +E RY SFI+LQDKLHQNICR+R+LVAIGTHDLDT++GPF Y
Sbjct: 115 TSKIRPFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTY 174
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLY 183
+A PP++I F PL QTK + E+++ Y
Sbjct: 175 EALPPTDINFVPLKQTKSFRADELIEFY 202
Score = 311 (114.5 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 56/88 (63%), Positives = 71/88 (80%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
TS+IRP V AVLR +T +E RY SFI+LQDKLHQNICR+R+LVAIGTHDLDT++GPF Y
Sbjct: 115 TSKIRPFVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRSLVAIGTHDLDTLQGPFTY 174
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
+A PP++I F PL QTK + E+++ Y
Sbjct: 175 EALPPTDINFVPLKQTKSFRADELIEFY 202
Score = 198 (74.8 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
T E+F LCF+FG+ELD+VT+EK II KE+ D E++IY+I++PANR DLLCLEG
Sbjct: 20 TQEKFEELCFSFGIELDDVTTEKAIIRKEKHIDEEADDDEEIIYKIEIPANRPDLLCLEG 79
Query: 90 LYNGL 94
L L
Sbjct: 80 LAQSL 84
>DICTYBASE|DDB_G0277303 [details] [associations]
symbol:phesB "phenylalanine-tRNA ligase, beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0009328 "phenylalanine-tRNA
ligase complex" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] InterPro:IPR004531
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483 SMART:SM00873
SMART:SM00874 dictyBase:DDB_G0277303 GO:GO:0005524 GO:GO:0000287
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000019
eggNOG:COG0072 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GO:GO:0009328 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 RefSeq:XP_642684.2 ProteinModelPortal:Q550D2
STRING:Q550D2 EnsemblProtists:DDB0231327 GeneID:8620873
KEGG:ddi:DDB_G0277303 ProtClustDB:CLSZ2429035 Uniprot:Q550D2
Length = 617
Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 58/114 (50%), Positives = 75/114 (65%)
Query: 73 YRIDVPANRYDLLCLEGLYNGLMTSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNI 132
Y+I P N + E LY +RP VA +LR+IT +E Y SFI+LQ+KLH NI
Sbjct: 98 YQIVPPKNSH-----EKLYISKEVESVRPVIVAGILRDITFTQESYDSFIDLQEKLHANI 152
Query: 133 CRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYATS 186
C+KR+LV+IGTHDLDT+ GPF Y A P +I+F PL+QTKEY+ E+ Y S
Sbjct: 153 CKKRSLVSIGTHDLDTLSGPFYYKALAPKDIKFVPLSQTKEYNAEELFKFYDES 206
Score = 277 (102.6 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
Identities = 50/85 (58%), Positives = 64/85 (75%)
Query: 188 IRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAK 247
+RP VA +LR+IT +E Y SFI+LQ+KLH NIC+KR+LV+IGTHDLDT+ GPF Y A
Sbjct: 119 VRPVIVAGILRDITFTQESYDSFIDLQEKLHANICKKRSLVSIGTHDLDTLSGPFYYKAL 178
Query: 248 PPSEIRFQPLNQTKEYTGTEIMDLY 272
P +I+F PL+QTKEY E+ Y
Sbjct: 179 APKDIKFVPLSQTKEYNAEELFKFY 203
Score = 200 (75.5 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
T E+F LCFAFG+ELDEVTSE+++ E G ++ S+DVIY+IDV ANRYDLLCLEG
Sbjct: 23 TQEQFEDLCFAFGVELDEVTSEREMKKNETGVEDLT-VSDDVIYKIDVSANRYDLLCLEG 81
Query: 90 LYNGL 94
+ L
Sbjct: 82 IARAL 86
Score = 39 (18.8 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 33/160 (20%), Positives = 66/160 (41%)
Query: 121 FIEL--QDKLHQNICRKRTLVAIGTHDLD--TIKGPFIYDAKPPSEIRFQPLNQTKEYSG 176
FIE+ D+ NI L + T++ + DA S + + + + +
Sbjct: 255 FIEVTANDRTKANIVLNTMLTMFSEYCKQPFTMEQVEVIDADGKSTGLYPQIQEKQINAQ 314
Query: 177 TEIMDLYATSQIRPHAVAAVLRNITL----NEERYASFIEL----QDKLHQNICRKRTLV 228
+ ++ A I P+ + +L+ ++L +++ + +++ D +H C V
Sbjct: 315 VDYINKSAGINITPNDMVTLLKRMSLQSKLSDDEKSIIVDVPVTRSDIMHA--CDIMEDV 372
Query: 229 AIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYTGTEI 268
AIG + D +K I + R QP+N+ E EI
Sbjct: 373 AIG-YGYDNLKKE-IPNCNTIG--RVQPINKLSELLANEI 408
>ASPGD|ASPL0000011475 [details] [associations]
symbol:AN4086 species:162425 "Emericella nidulans"
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0009328 "phenylalanine-tRNA ligase
complex" evidence=IEA] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 GO:GO:0005524
GO:GO:0005737 GO:GO:0000287 GO:GO:0003723 EMBL:BN001302
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 HOGENOM:HOG000105095
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 Gene3D:3.50.40.10
InterPro:IPR020825 SUPFAM:SSF56037 EnsemblFungi:CADANIAT00004595
Uniprot:C8V5C4
Length = 600
Score = 314 (115.6 bits), Expect = 9.5e-39, Sum P(2) = 9.5e-39
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
TS+IRP A+LRN+T ++ RY SFI LQDKLHQN+ R+RTLV+IGTHDLDTIKGPF Y
Sbjct: 108 TSKIRPLVSGAILRNVTFDKARYESFIALQDKLHQNLARQRTLVSIGTHDLDTIKGPFSY 167
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLY 183
+A PP +IRF PLNQTKE G E+M Y
Sbjct: 168 EALPPKDIRFVPLNQTKEMDGEELMAFY 195
Score = 313 (115.2 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
TS+IRP A+LRN+T ++ RY SFI LQDKLHQN+ R+RTLV+IGTHDLDTIKGPF Y
Sbjct: 108 TSKIRPLVSGAILRNVTFDKARYESFIALQDKLHQNLARQRTLVSIGTHDLDTIKGPFSY 167
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
+A PP +IRF PLNQTKE G E+M Y
Sbjct: 168 EALPPKDIRFVPLNQTKEMDGEELMAFY 195
Score = 130 (50.8 bits), Expect = 9.5e-39, Sum P(2) = 9.5e-39
Identities = 30/63 (47%), Positives = 38/63 (60%)
Query: 30 TDEEFASLCFAFGLELDEVT--SEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCL 87
T EEF LCF FG+ELDE T S++ I+ G E +I++PANRYDLLC
Sbjct: 20 TTEEFDELCFEFGIELDEDTTNSDRPIVD---------GVQEPPQLKIEIPANRYDLLCF 70
Query: 88 EGL 90
EG+
Sbjct: 71 EGI 73
>UNIPROTKB|F5H6Y1 [details] [associations]
symbol:FARSB "Phenylalanine--tRNA ligase beta subunit"
species:9606 "Homo sapiens" [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006432 "phenylalanyl-tRNA aminoacylation" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 EMBL:AC104772 Gene3D:3.30.56.20 TIGRFAMs:TIGR00471
InterPro:IPR020825 SUPFAM:SSF56037 EMBL:AC097461 HGNC:HGNC:17800
ChiTaRS:FARSB IPI:IPI01009249 ProteinModelPortal:F5H6Y1 SMR:F5H6Y1
Ensembl:ENST00000536361 ArrayExpress:F5H6Y1 Bgee:F5H6Y1
Uniprot:F5H6Y1
Length = 490
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 64/96 (66%), Positives = 78/96 (81%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T++IRP AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 15 TAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 74
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK PS+I+F+PLN+TKEY+ E+M++Y T H
Sbjct: 75 TAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKH 110
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 63/88 (71%), Positives = 76/88 (86%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T++IRP AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 15 TAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 74
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
AK PS+I+F+PLN+TKEYT E+M++Y
Sbjct: 75 TAKRPSDIKFKPLNKTKEYTACELMNIY 102
>SGD|S000004050 [details] [associations]
symbol:FRS1 "Beta subunit of cytoplasmic phenylalanyl-tRNA
synthetase" species:4932 "Saccharomyces cerevisiae" [GO:0006412
"translation" evidence=IEA] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=IEA;IDA] [GO:0004826 "phenylalanine-tRNA
ligase activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0009328 "phenylalanine-tRNA ligase complex"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 SGD:S000004050 GO:GO:0005524
GO:GO:0000287 EMBL:BK006945 GO:GO:0003723 eggNOG:COG0072
SUPFAM:SSF46955 EMBL:X94607 GO:GO:0004826 GO:GO:0006432
GeneTree:ENSGT00530000063489 GO:GO:0009328 HOGENOM:HOG000105095
KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471
OrthoDB:EOG46HKJZ EMBL:J03964 EMBL:Z73232 EMBL:AY692778 PIR:S61634
RefSeq:NP_013161.1 ProteinModelPortal:P15624 SMR:P15624
DIP:DIP-6746N IntAct:P15624 MINT:MINT-616734 STRING:P15624
PaxDb:P15624 PeptideAtlas:P15624 EnsemblFungi:YLR060W GeneID:850749
KEGG:sce:YLR060W NextBio:966879 Genevestigator:P15624
GermOnline:YLR060W Uniprot:P15624
Length = 595
Score = 347 (127.2 bits), Expect = 4.7e-31, P = 4.7e-31
Identities = 79/173 (45%), Positives = 111/173 (64%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGA---DNS---------KGASEDV---IYR 74
T +EF LCF FG+E+DE T+E+ + + E+ D S +G S+ + + R
Sbjct: 20 TSQEFDELCFEFGMEMDEDTTEEALKTGEEPELKLDISANRYDLLCIEGISQSLNEYLER 79
Query: 75 IDVPANRYDLLCLEGLYNGLMTSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICR 134
+ P + + L T QIRP A AAVLRNI LNE+ YASFI LQDKLH N+CR
Sbjct: 80 KERPDYKLSKPTTK-LIIDKSTEQIRPFATAAVLRNIKLNEKSYASFIALQDKLHANLCR 138
Query: 135 KRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQ 187
R+LVA+GTHDLD+I+GPF Y A PP +I+F PLNQT+E++G ++++ Y + +
Sbjct: 139 NRSLVAMGTHDLDSIEGPFHYRALPPKDIKFVPLNQTQEFTGDKLIEFYKSPE 191
Score = 320 (117.7 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 59/89 (66%), Positives = 74/89 (83%)
Query: 184 ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI 243
+T QIRP A AAVLRNI LNE+ YASFI LQDKLH N+CR R+LVA+GTHDLD+I+GPF
Sbjct: 99 STEQIRPFATAAVLRNIKLNEKSYASFIALQDKLHANLCRNRSLVAMGTHDLDSIEGPFH 158
Query: 244 YDAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
Y A PP +I+F PLNQT+E+TG ++++ Y
Sbjct: 159 YRALPPKDIKFVPLNQTQEFTGDKLIEFY 187
>UNIPROTKB|F1SR70 [details] [associations]
symbol:LOC100524650 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006432 "phenylalanyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0005737
GO:GO:0000287 GO:GO:0003723 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 GeneTree:ENSGT00530000063489 Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 InterPro:IPR020825 SUPFAM:SSF56037 EMBL:CU861974
Ensembl:ENSSSCT00000017668 OMA:CKIDISV Uniprot:F1SR70
Length = 356
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 61/96 (63%), Positives = 79/96 (82%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T++IRP+AVAAVLRN+ ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 16 TAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 75
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK P++I+F+PLN++KEY+ E+M++Y T H
Sbjct: 76 TAKKPADIKFKPLNKSKEYTACELMNIYKTDNQLKH 111
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
T++IRP+AVAAVLRN+ ++RY SFIELQ+KLHQNICRKR LVAIGTHDLDT+ GPF Y
Sbjct: 16 TAKIRPYAVAAVLRNMKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTY 75
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
AK P++I+F+PLN++KEYT E+M++Y
Sbjct: 76 TAKKPADIKFKPLNKSKEYTACELMNIY 103
>UNIPROTKB|J9P9M6 [details] [associations]
symbol:J9P9M6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR005146 Pfam:PF03483 GO:GO:0003723 GO:GO:0004826
GeneTree:ENSGT00530000063489 EMBL:AAEX03007400
Ensembl:ENSCAFT00000044407 Uniprot:J9P9M6
Length = 170
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 68/122 (55%), Positives = 88/122 (72%)
Query: 151 GPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAVAAVLRNITLNEERYASF 210
GP + K P R P + ++ TE T++IRP+AVAAVLRNI ++RY SF
Sbjct: 31 GPEL-QIKAPVHKRVTPNGEIQKLIITE-----ETAKIRPYAVAAVLRNIKFTKDRYDSF 84
Query: 211 IELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYTGTEIMD 270
IELQ+KLHQNICRKR LVAIGTHD+DT+ GPF + AK PS+I+ +PLN+TKEYT E+M+
Sbjct: 85 IELQEKLHQNICRKRALVAIGTHDMDTLSGPFTHTAKRPSDIKLKPLNKTKEYTACEMMN 144
Query: 271 LY 272
+Y
Sbjct: 145 IY 146
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 61/96 (63%), Positives = 78/96 (81%)
Query: 96 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 155
T++IRP+AVAAVLRNI ++RY SFIELQ+KLHQNICRKR LVAIGTHD+DT+ GPF +
Sbjct: 59 TAKIRPYAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDMDTLSGPFTH 118
Query: 156 DAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPH 191
AK PS+I+ +PLN+TKEY+ E+M++Y T H
Sbjct: 119 TAKRPSDIKLKPLNKTKEYTACEMMNIYKTDNHLKH 154
>POMBASE|SPAC23A1.12c [details] [associations]
symbol:frs1 "phenylalanine-tRNA ligase beta subunit
Frs1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000287 "magnesium ion binding" evidence=IEA] [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006432 "phenylalanyl-tRNA
aminoacylation" evidence=ISS] [GO:0009328 "phenylalanine-tRNA
ligase complex" evidence=IC] InterPro:IPR004531 InterPro:IPR005146
InterPro:IPR005147 InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484
PROSITE:PS51483 SMART:SM00873 SMART:SM00874 PomBase:SPAC23A1.12c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0000287 GO:GO:0003723 GO:GO:0002181 eggNOG:COG0072
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 GO:GO:0009328
HOGENOM:HOG000105095 KO:K01890 OMA:FFPNRPD Gene3D:3.30.56.20
TIGRFAMs:TIGR00471 PIR:T38232 RefSeq:NP_594442.1
ProteinModelPortal:O42849 STRING:O42849 PRIDE:O42849
EnsemblFungi:SPAC23A1.12c.1 GeneID:2541974 KEGG:spo:SPAC23A1.12c
OrthoDB:EOG46HKJZ NextBio:20803056 Uniprot:O42849
Length = 589
Score = 324 (119.1 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 80/203 (39%), Positives = 118/203 (58%)
Query: 30 TDEEFASLCFAFGLELDEVT--------SEKQIISKEQGADNS-----KGASEDV-IYRI 75
T +EF LCF FG+ELDE T SE+ + + A+ +G ++ + ++
Sbjct: 20 TTQEFDELCFQFGIELDEDTTNDPERSPSERPSLKIDIPANRYDMLCLEGIAQALNVFNR 79
Query: 76 DVPANRYDLL-CLEGLYNGLMTSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICR 134
+ +Y LL L TS+IRP+A AA+LR + L+ RY SFI LQDKLH N+CR
Sbjct: 80 RMATPQYKLLPSTTSLTISPETSEIRPYAAAAILRGVKLDPIRYQSFIALQDKLHANLCR 139
Query: 135 KRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYATSQIRPHAVA 194
RTLVAIGTHD ++GPF Y+A P EI F PLNQT+E +G+ +++ Y S+ H ++
Sbjct: 140 NRTLVAIGTHDFSVMEGPFTYEALKPEEINFVPLNQTQEINGSNLLEFYKDSK---H-LS 195
Query: 195 AVLRNITLNEERYASFIELQDKL 217
L +I N RY ++ + ++
Sbjct: 196 RYL-HIIANSPRYPVILDAKRRV 217
Score = 286 (105.7 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 185 TSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIY 244
TS+IRP+A AA+LR + L+ RY SFI LQDKLH N+CR RTLVAIGTHD ++GPF Y
Sbjct: 101 TSEIRPYAAAAILRGVKLDPIRYQSFIALQDKLHANLCRNRTLVAIGTHDFSVMEGPFTY 160
Query: 245 DAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
+A P EI F PLNQT+E G+ +++ Y
Sbjct: 161 EALKPEEINFVPLNQTQEINGSNLLEFY 188
>CGD|CAL0002521 [details] [associations]
symbol:FRS1 species:5476 "Candida albicans" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA;ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 CGD:CAL0002521 GO:GO:0005524
GO:GO:0000287 GO:GO:0003723 GO:GO:0035690 EMBL:AACQ01000044
EMBL:AACQ01000043 SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432
GO:GO:0009328 KO:K01890 Gene3D:3.30.56.20 TIGRFAMs:TIGR00471
RefSeq:XP_718239.1 RefSeq:XP_718335.1 ProteinModelPortal:Q5A993
STRING:Q5A993 GeneID:3640034 GeneID:3640121 KEGG:cal:CaO19.10105
KEGG:cal:CaO19.2573 Uniprot:Q5A993
Length = 592
Score = 309 (113.8 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 76/170 (44%), Positives = 101/170 (59%)
Query: 30 TDEEFASLCFAFGLELDEVTSE-------KQIISKEQGADNS-----KGASEDVIYRI-D 76
T EEF LCF FG+ELDE T+E + + E A+ +G ++ + + +
Sbjct: 20 TTEEFDELCFQFGIELDEDTTEDVKGTDERPQLKIEVPANRYDMLCIEGIAQALNEFLGN 79
Query: 77 VPANRYDLLCLE---GLYNGLMTSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNIC 133
A Y L + L T IR +A +A+LRN+ L+E Y SFI LQDKLH N+C
Sbjct: 80 TSAPNYKLSPSKPEISLTIKESTYPIRQYAASAILRNVKLDERAYDSFISLQDKLHANLC 139
Query: 134 RKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLY 183
R RTLVAIGTHDLDT+ PF Y+A P +I F+PLNQTKE +G E+M+ Y
Sbjct: 140 RNRTLVAIGTHDLDTLTPPFTYEALAPKDIVFKPLNQTKEINGEELMEFY 189
Score = 289 (106.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 54/89 (60%), Positives = 67/89 (75%)
Query: 184 ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI 243
+T IR +A +A+LRN+ L+E Y SFI LQDKLH N+CR RTLVAIGTHDLDT+ PF
Sbjct: 101 STYPIRQYAASAILRNVKLDERAYDSFISLQDKLHANLCRNRTLVAIGTHDLDTLTPPFT 160
Query: 244 YDAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
Y+A P +I F+PLNQTKE G E+M+ Y
Sbjct: 161 YEALAPKDIVFKPLNQTKEINGEELMEFY 189
>UNIPROTKB|Q5A993 [details] [associations]
symbol:FRS1 "Putative uncharacterized protein FRS1"
species:237561 "Candida albicans SC5314" [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=ISS] [GO:0006432
"phenylalanyl-tRNA aminoacylation" evidence=ISS] [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR004531
InterPro:IPR005146 InterPro:IPR005147 InterPro:IPR009061
Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483 SMART:SM00873
SMART:SM00874 CGD:CAL0002521 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 GO:GO:0035690 EMBL:AACQ01000044 EMBL:AACQ01000043
SUPFAM:SSF46955 GO:GO:0004826 GO:GO:0006432 GO:GO:0009328 KO:K01890
Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 RefSeq:XP_718239.1
RefSeq:XP_718335.1 ProteinModelPortal:Q5A993 STRING:Q5A993
GeneID:3640034 GeneID:3640121 KEGG:cal:CaO19.10105
KEGG:cal:CaO19.2573 Uniprot:Q5A993
Length = 592
Score = 309 (113.8 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 76/170 (44%), Positives = 101/170 (59%)
Query: 30 TDEEFASLCFAFGLELDEVTSE-------KQIISKEQGADNS-----KGASEDVIYRI-D 76
T EEF LCF FG+ELDE T+E + + E A+ +G ++ + + +
Sbjct: 20 TTEEFDELCFQFGIELDEDTTEDVKGTDERPQLKIEVPANRYDMLCIEGIAQALNEFLGN 79
Query: 77 VPANRYDLLCLE---GLYNGLMTSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNIC 133
A Y L + L T IR +A +A+LRN+ L+E Y SFI LQDKLH N+C
Sbjct: 80 TSAPNYKLSPSKPEISLTIKESTYPIRQYAASAILRNVKLDERAYDSFISLQDKLHANLC 139
Query: 134 RKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLY 183
R RTLVAIGTHDLDT+ PF Y+A P +I F+PLNQTKE +G E+M+ Y
Sbjct: 140 RNRTLVAIGTHDLDTLTPPFTYEALAPKDIVFKPLNQTKEINGEELMEFY 189
Score = 289 (106.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 54/89 (60%), Positives = 67/89 (75%)
Query: 184 ATSQIRPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFI 243
+T IR +A +A+LRN+ L+E Y SFI LQDKLH N+CR RTLVAIGTHDLDT+ PF
Sbjct: 101 STYPIRQYAASAILRNVKLDERAYDSFISLQDKLHANLCRNRTLVAIGTHDLDTLTPPFT 160
Query: 244 YDAKPPSEIRFQPLNQTKEYTGTEIMDLY 272
Y+A P +I F+PLNQTKE G E+M+ Y
Sbjct: 161 YEALAPKDIVFKPLNQTKEINGEELMEFY 189
>UNIPROTKB|I3L8P7 [details] [associations]
symbol:LOC100738149 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR009061 GO:GO:0000166 SUPFAM:SSF46955
GeneTree:ENSGT00530000063489 EMBL:CU856656 RefSeq:XP_003483794.1
Ensembl:ENSSSCT00000023834 GeneID:100738149 KEGG:ssc:100738149
Uniprot:I3L8P7
Length = 90
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 49/71 (69%), Positives = 59/71 (83%)
Query: 30 TDEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEG 89
T+EEF LCF FGLELDE+TSEK+IISKEQG + ++GAS+ V+Y+IDVPANRYDLLCLEG
Sbjct: 20 TNEEFDELCFEFGLELDEITSEKEIISKEQGNEKAQGASDVVLYKIDVPANRYDLLCLEG 79
Query: 90 LYNGLMTSQIR 100
L GL + R
Sbjct: 80 LVRGLQVFKER 90
>GENEDB_PFALCIPARUM|PF11_0051 [details] [associations]
symbol:PF11_0051 "phenylalanine --tRNA ligase,
putative" species:5833 "Plasmodium falciparum" [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 EMBL:AE014186 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 GO:GO:0009328 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 ProtClustDB:CLSZ2429035 RefSeq:XP_001347727.1
ProteinModelPortal:Q8IIW2 PRIDE:Q8IIW2
EnsemblProtists:PF11_0051:mRNA GeneID:810604 KEGG:pfa:PF11_0051
EuPathDB:PlasmoDB:PF3D7_1104000 Uniprot:Q8IIW2
Length = 623
Score = 210 (79.0 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 45/128 (35%), Positives = 78/128 (60%)
Query: 69 EDVIYRIDVPANRYDLLCLEG-LY---NGLMTSQIRPHAVAAVLRNITLNEERYASFIEL 124
+D+ Y D+ N YD+ C++G Y +G + + R + V VL+N+ +N+ Y + IE+
Sbjct: 76 DDIKY--DISMNNYDI-CIKGNQYIKVDGSVDDR-RGYVVCCVLKNMNINDSVYNNIIEI 131
Query: 125 QDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYA 184
Q+KLH N+ +KR+++AIG HD D IK P Y + +I F PLN+ +G ++D Y+
Sbjct: 132 QEKLHHNLGKKRSVLAIGIHDYDKIKFPLKYKFEKKEKINFIPLNEKTNLNGMNLIDFYS 191
Query: 185 TS-QIRPH 191
+ ++P+
Sbjct: 192 KNLNLKPY 199
Score = 184 (69.8 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 34/85 (40%), Positives = 53/85 (62%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
R + V VL+N+ +N+ Y + IE+Q+KLH N+ +KR+++AIG HD D IK P Y +
Sbjct: 107 RGYVVCCVLKNMNINDSVYNNIIEIQEKLHHNLGKKRSVLAIGIHDYDKIKFPLKYKFEK 166
Query: 249 PSEIRFQPLNQTKEYTGTEIMDLYA 273
+I F PLN+ G ++D Y+
Sbjct: 167 KEKINFIPLNEKTNLNGMNLIDFYS 191
Score = 106 (42.4 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 31 DEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEGL 90
+E+ +CF FGLE+D++ + N K IY+I+VPANRYDL+C+EGL
Sbjct: 21 EEKLLDVCFDFGLEVDDIEYK-----------NDKK-----IYKIEVPANRYDLICVEGL 64
Query: 91 YNGL 94
L
Sbjct: 65 CRAL 68
>UNIPROTKB|Q8IIW2 [details] [associations]
symbol:PF11_0051 "Phenylalanyl-tRNA synthetase beta chain,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0009328
"phenylalanine-tRNA ligase complex" evidence=ISS]
InterPro:IPR004531 InterPro:IPR005146 InterPro:IPR005147
InterPro:IPR009061 Pfam:PF03483 Pfam:PF03484 PROSITE:PS51483
SMART:SM00873 SMART:SM00874 GO:GO:0005524 GO:GO:0000287
GO:GO:0003723 EMBL:AE014186 SUPFAM:SSF46955 GO:GO:0004826
GO:GO:0006432 GO:GO:0009328 HOGENOM:HOG000105095 KO:K01890
OMA:FFPNRPD Gene3D:3.30.56.20 TIGRFAMs:TIGR00471 InterPro:IPR020825
SUPFAM:SSF56037 ProtClustDB:CLSZ2429035 RefSeq:XP_001347727.1
ProteinModelPortal:Q8IIW2 PRIDE:Q8IIW2
EnsemblProtists:PF11_0051:mRNA GeneID:810604 KEGG:pfa:PF11_0051
EuPathDB:PlasmoDB:PF3D7_1104000 Uniprot:Q8IIW2
Length = 623
Score = 210 (79.0 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 45/128 (35%), Positives = 78/128 (60%)
Query: 69 EDVIYRIDVPANRYDLLCLEG-LY---NGLMTSQIRPHAVAAVLRNITLNEERYASFIEL 124
+D+ Y D+ N YD+ C++G Y +G + + R + V VL+N+ +N+ Y + IE+
Sbjct: 76 DDIKY--DISMNNYDI-CIKGNQYIKVDGSVDDR-RGYVVCCVLKNMNINDSVYNNIIEI 131
Query: 125 QDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSGTEIMDLYA 184
Q+KLH N+ +KR+++AIG HD D IK P Y + +I F PLN+ +G ++D Y+
Sbjct: 132 QEKLHHNLGKKRSVLAIGIHDYDKIKFPLKYKFEKKEKINFIPLNEKTNLNGMNLIDFYS 191
Query: 185 TS-QIRPH 191
+ ++P+
Sbjct: 192 KNLNLKPY 199
Score = 184 (69.8 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 34/85 (40%), Positives = 53/85 (62%)
Query: 189 RPHAVAAVLRNITLNEERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKP 248
R + V VL+N+ +N+ Y + IE+Q+KLH N+ +KR+++AIG HD D IK P Y +
Sbjct: 107 RGYVVCCVLKNMNINDSVYNNIIEIQEKLHHNLGKKRSVLAIGIHDYDKIKFPLKYKFEK 166
Query: 249 PSEIRFQPLNQTKEYTGTEIMDLYA 273
+I F PLN+ G ++D Y+
Sbjct: 167 KEKINFIPLNEKTNLNGMNLIDFYS 191
Score = 106 (42.4 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 31 DEEFASLCFAFGLELDEVTSEKQIISKEQGADNSKGASEDVIYRIDVPANRYDLLCLEGL 90
+E+ +CF FGLE+D++ + N K IY+I+VPANRYDL+C+EGL
Sbjct: 21 EEKLLDVCFDFGLEVDDIEYK-----------NDKK-----IYKIEVPANRYDLICVEGL 64
Query: 91 YNGL 94
L
Sbjct: 65 CRAL 68
>UNIPROTKB|F1P3V4 [details] [associations]
symbol:F1P3V4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR005146 Pfam:PF03483 PROSITE:PS51450
SMART:SM00873 InterPro:IPR003591 SMART:SM00369 GO:GO:0003723
GO:GO:0004826 OMA:ADNCLRE GeneTree:ENSGT00530000063489
EMBL:AADN02040905 IPI:IPI00593719 Ensembl:ENSGALT00000001448
Uniprot:F1P3V4
Length = 582
Score = 175 (66.7 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 99 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+RP+ V VLR + L F+ Q KLH++IC KRT I THDL +KGP Y
Sbjct: 336 VRPYIVCCVLRGVQLRPGNALRRFLSAQTKLHEDICEKRTAATIATHDLQLVKGPLTYGV 395
Query: 158 KPPSEIRFQPLNQTKEYSGTEIM 180
+PP+E++ PL + KE +++
Sbjct: 396 QPPAELKITPLGR-KEIRAKDLL 417
Score = 175 (66.7 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 188 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+RP+ V VLR + L F+ Q KLH++IC KRT I THDL +KGP Y
Sbjct: 336 VRPYIVCCVLRGVQLRPGNALRRFLSAQTKLHEDICEKRTAATIATHDLQLVKGPLTYGV 395
Query: 247 KPPSEIRFQPLNQTKEYTGTEIM 269
+PP+E++ PL + KE +++
Sbjct: 396 QPPAELKITPLGR-KEIRAKDLL 417
>WB|WBGene00021828 [details] [associations]
symbol:Y54E10A.6 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR005146 PROSITE:PS51450 SMART:SM00873
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0003723
EMBL:FO081614 GO:GO:0004826 HOGENOM:HOG000007166 OMA:ADNCLRE
GeneTree:ENSGT00530000063489 RefSeq:NP_491115.1
ProteinModelPortal:Q9N3F2 SMR:Q9N3F2 DIP:DIP-25158N
MINT:MINT-1076680 STRING:Q9N3F2 PaxDb:Q9N3F2
EnsemblMetazoa:Y54E10A.6 GeneID:171890 KEGG:cel:CELE_Y54E10A.6
UCSC:Y54E10A.6 CTD:171890 WormBase:Y54E10A.6 InParanoid:Q9N3F2
NextBio:873127 Uniprot:Q9N3F2
Length = 507
Score = 174 (66.3 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 97 SQIRPHAVAAVLRNITLNE-ERYASFIELQDKLHQN-ICRKRTLVAIGTHDLDTIKGPFI 154
S+IRP+ V V+ N+ LN + + FI LQ K+H + +C RTL AIGTH LD+ + P
Sbjct: 294 SEIRPYLVCCVINNVDLNGGDSFKKFIALQTKMHASALCENRTLSAIGTHRLDSFQLPLC 353
Query: 155 YDAKPPSEIRFQPLNQTKEYSGTEIMD 181
Y A P E+ + LN+ S +E++D
Sbjct: 354 YMALPKDELYIRALNKKSSVSASELLD 380
Score = 172 (65.6 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 184 ATSQIRPHAVAAVLRNITLNE-ERYASFIELQDKLHQN-ICRKRTLVAIGTHDLDTIKGP 241
+ S+IRP+ V V+ N+ LN + + FI LQ K+H + +C RTL AIGTH LD+ + P
Sbjct: 292 SVSEIRPYLVCCVINNVDLNGGDSFKKFIALQTKMHASALCENRTLSAIGTHRLDSFQLP 351
Query: 242 FIYDAKPPSEIRFQPLNQTKEYTGTEIMD 270
Y A P E+ + LN+ + +E++D
Sbjct: 352 LCYMALPKDELYIRALNKKSSVSASELLD 380
>UNIPROTKB|F1PYM5 [details] [associations]
symbol:LRRC47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004826 "phenylalanine-tRNA ligase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR005146 Pfam:PF03483 PROSITE:PS51450
SMART:SM00873 InterPro:IPR003591 SMART:SM00369 GO:GO:0003723
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004826 CTD:57470 OMA:ADNCLRE
GeneTree:ENSGT00530000063489 EMBL:AAEX03003882 EMBL:AAEX03003883
RefSeq:XP_546742.2 Ensembl:ENSCAFT00000030989 GeneID:489622
KEGG:cfa:489622 Uniprot:F1PYM5
Length = 589
Score = 172 (65.6 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 33/87 (37%), Positives = 50/87 (57%)
Query: 184 ATSQIRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPF 242
A +RP V AV+R + L F+ Q KLH++IC KRT I THDL ++GP
Sbjct: 334 AVKDVRPFIVGAVVRGMDLQAGNALRRFLTSQTKLHEDICEKRTAATIATHDLRAVRGPL 393
Query: 243 IYDAKPPSEIRFQPLNQTKEYTGTEIM 269
+Y A+PP +++ PL + KE +++
Sbjct: 394 VYTARPPQDLKIVPLGR-KEVKAKDLV 419
Score = 171 (65.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 59 QGADNSKGASEDVIYRI-DVPANRYDLLCLEGLYNGLMTSQIRPHAVAAVLRNITLNE-E 116
+G + G++ ++ R+ V N L ++ +RP V AV+R + L
Sbjct: 301 EGEEEEVGSTSRLLLRVLHVSENPTPLT----VHVNAAVKDVRPFIVGAVVRGMDLQAGN 356
Query: 117 RYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDAKPPSEIRFQPLNQTKEYSG 176
F+ Q KLH++IC KRT I THDL ++GP +Y A+PP +++ PL + KE
Sbjct: 357 ALRRFLTSQTKLHEDICEKRTAATIATHDLRAVRGPLVYTARPPQDLKIVPLGR-KEVKA 415
Query: 177 TEIM 180
+++
Sbjct: 416 KDLV 419
>RGD|1308599 [details] [associations]
symbol:Lrrc47 "leucine rich repeat containing 47" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR005146 Pfam:PF03483 PROSITE:PS51450
SMART:SM00873 RGD:1308599 InterPro:IPR003591 SMART:SM00369
GO:GO:0003723 InterPro:IPR025875 Pfam:PF12799 GO:GO:0004826
OMA:ADNCLRE GeneTree:ENSGT00530000063489 IPI:IPI00763427
PhosphoSite:F1LT49 PRIDE:F1LT49 Ensembl:ENSRNOT00000034284
Uniprot:F1LT49
Length = 581
Score = 171 (65.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 99 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+RP+ V AV+R + L F+ Q KLH ++C KRT I THDL ++GP +Y A
Sbjct: 331 VRPYIVGAVVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 390
Query: 158 KPPSEIRFQPLNQTKEYSGTEIM 180
+PP +++ PL + KE E++
Sbjct: 391 RPPEDLKIVPLGR-KEAKAKELV 412
Score = 170 (64.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 188 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+RP+ V AV+R + L F+ Q KLH ++C KRT I THDL ++GP +Y A
Sbjct: 331 VRPYIVGAVVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 390
Query: 247 KPPSEIRFQPLNQTKEYTGTEIM 269
+PP +++ PL + KE E++
Sbjct: 391 RPPEDLKIVPLGR-KEAKAKELV 412
>MGI|MGI:1920196 [details] [associations]
symbol:Lrrc47 "leucine rich repeat containing 47"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004826
"phenylalanine-tRNA ligase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008152 "metabolic process" evidence=IEA]
InterPro:IPR001611 InterPro:IPR005146 Pfam:PF03483 PROSITE:PS51450
SMART:SM00873 MGI:MGI:1920196 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0003723 InterPro:IPR025875 Pfam:PF12799
GO:GO:0004826 CTD:57470 HOGENOM:HOG000007166 HOVERGEN:HBG066309
OrthoDB:EOG4FTW0M EMBL:AK013512 EMBL:AK154897 EMBL:BC094573
EMBL:AK129306 IPI:IPI00138089 RefSeq:NP_957678.1 UniGene:Mm.260690
ProteinModelPortal:Q505F5 SMR:Q505F5 IntAct:Q505F5
PhosphoSite:Q505F5 REPRODUCTION-2DPAGE:Q505F5 PaxDb:Q505F5
PRIDE:Q505F5 Ensembl:ENSMUST00000030894 GeneID:72946 KEGG:mmu:72946
GeneTree:ENSGT00530000063489 InParanoid:Q505F5 NextBio:337191
Bgee:Q505F5 CleanEx:MM_LRRC47 Genevestigator:Q505F5
GermOnline:ENSMUSG00000029028 Uniprot:Q505F5
Length = 581
Score = 170 (64.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 99 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+RP+ V A++R + L F+ Q KLH ++C KRT I THDL ++GP +Y A
Sbjct: 331 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 390
Query: 158 KPPSEIRFQPLNQTKEYSGTEIM 180
+PP +++ PL + KE E++
Sbjct: 391 RPPEDLKIVPLGR-KEAKAKELV 412
Score = 169 (64.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 188 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+RP+ V A++R + L F+ Q KLH ++C KRT I THDL ++GP +Y A
Sbjct: 331 VRPYIVGAIVRGMDLQPGNALRRFLNSQTKLHDDLCEKRTAATIATHDLQAVRGPLLYAA 390
Query: 247 KPPSEIRFQPLNQTKEYTGTEIM 269
+PP +++ PL + KE E++
Sbjct: 391 RPPEDLKIVPLGR-KEAKAKELV 412
>UNIPROTKB|Q8N1G4 [details] [associations]
symbol:LRRC47 "Leucine-rich repeat-containing protein 47"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR005146 Pfam:PF03483 PROSITE:PS51450 SMART:SM00873
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0003723
InterPro:IPR025875 Pfam:PF12799 EMBL:AL365330 GO:GO:0004826
EMBL:BC031301 EMBL:AB033011 IPI:IPI00170935 RefSeq:NP_065761.1
UniGene:Hs.268488 ProteinModelPortal:Q8N1G4 SMR:Q8N1G4
IntAct:Q8N1G4 STRING:Q8N1G4 PhosphoSite:Q8N1G4 DMDM:74750895
PaxDb:Q8N1G4 PeptideAtlas:Q8N1G4 PRIDE:Q8N1G4
Ensembl:ENST00000378251 GeneID:57470 KEGG:hsa:57470 UCSC:uc001akx.1
CTD:57470 GeneCards:GC01M003696 HGNC:HGNC:29207 HPA:HPA008512
HPA:HPA012018 neXtProt:NX_Q8N1G4 PharmGKB:PA142671507
HOGENOM:HOG000007166 HOVERGEN:HBG066309 InParanoid:Q8N1G4
OMA:ADNCLRE OrthoDB:EOG4FTW0M PhylomeDB:Q8N1G4 ChiTaRS:LRRC47
GenomeRNAi:57470 NextBio:63693 PMAP-CutDB:Q8N1G4 Bgee:Q8N1G4
CleanEx:HS_LRRC47 Genevestigator:Q8N1G4 GermOnline:ENSG00000130764
Uniprot:Q8N1G4
Length = 583
Score = 166 (63.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 99 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+RP+ V AV+R + L F+ Q KLH+++C KRT + TH+L +KGP +Y A
Sbjct: 332 VRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYCA 391
Query: 158 KPPSEIRFQPLNQTKEYSGTEIM 180
+PP +++ PL + KE E++
Sbjct: 392 RPPQDLKIVPLGR-KEAKAKELV 413
Score = 165 (63.1 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 31/83 (37%), Positives = 50/83 (60%)
Query: 188 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+RP+ V AV+R + L F+ Q KLH+++C KRT + TH+L +KGP +Y A
Sbjct: 332 VRPYIVGAVVRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYCA 391
Query: 247 KPPSEIRFQPLNQTKEYTGTEIM 269
+PP +++ PL + KE E++
Sbjct: 392 RPPQDLKIVPLGR-KEAKAKELV 413
>ZFIN|ZDB-GENE-060503-289 [details] [associations]
symbol:lrrc47 "leucine rich repeat containing 47"
species:7955 "Danio rerio" [GO:0004826 "phenylalanine-tRNA ligase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR005146 Pfam:PF03483
PROSITE:PS51450 SMART:SM00873 ZFIN:ZDB-GENE-060503-289
InterPro:IPR003591 SMART:SM00369 GO:GO:0003723 GO:GO:0004826
GeneTree:ENSGT00530000063489 EMBL:CT737125 EMBL:CR352301
IPI:IPI00890622 ProteinModelPortal:F1QAF8
Ensembl:ENSDART00000075129 ArrayExpress:F1QAF8 Uniprot:F1QAF8
Length = 575
Score = 164 (62.8 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 31/87 (35%), Positives = 48/87 (55%)
Query: 184 ATSQIRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPF 242
A +RP+ V +++ + L + F+ Q KLH IC KRT I THDL +K P
Sbjct: 329 AVKDVRPYIVCCIVKGMNLRQGNSLKRFLVAQTKLHDEICAKRTTATIATHDLGLLKYPL 388
Query: 243 IYDAKPPSEIRFQPLNQTKEYTGTEIM 269
+YDA+PP ++ PL + KE +++
Sbjct: 389 LYDARPPDTLKIIPLGR-KEVKAVDLL 414
Score = 161 (61.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 30/83 (36%), Positives = 47/83 (56%)
Query: 99 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+RP+ V +++ + L + F+ Q KLH IC KRT I THDL +K P +YDA
Sbjct: 333 VRPYIVCCIVKGMNLRQGNSLKRFLVAQTKLHDEICAKRTTATIATHDLGLLKYPLLYDA 392
Query: 158 KPPSEIRFQPLNQTKEYSGTEIM 180
+PP ++ PL + KE +++
Sbjct: 393 RPPDTLKIIPLGR-KEVKAVDLL 414
>UNIPROTKB|A6QR01 [details] [associations]
symbol:LRRC47 "LRRC47 protein" species:9913 "Bos taurus"
[GO:0004826 "phenylalanine-tRNA ligase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR005146 Pfam:PF03483 PROSITE:PS51450 SMART:SM00873
InterPro:IPR003591 SMART:SM00369 GO:GO:0003723 eggNOG:COG0072
InterPro:IPR025875 Pfam:PF12799 GO:GO:0004826 CTD:57470
HOGENOM:HOG000007166 HOVERGEN:HBG066309 OMA:ADNCLRE
OrthoDB:EOG4FTW0M GeneTree:ENSGT00530000063489 EMBL:DAAA02043184
EMBL:BC150059 IPI:IPI00867215 RefSeq:NP_001095768.1
UniGene:Bt.12210 Ensembl:ENSBTAT00000006219 GeneID:616209
KEGG:bta:616209 InParanoid:A6QR01 NextBio:20900016 Uniprot:A6QR01
Length = 581
Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 30/83 (36%), Positives = 49/83 (59%)
Query: 99 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 157
+RP V AV+R + L F+ Q KLH+++C KRT+ I THDL ++GP +Y A
Sbjct: 330 VRPFFVGAVVRGMDLRPGNALKRFLSCQTKLHEDLCEKRTVATIATHDLGAVRGPLLYAA 389
Query: 158 KPPSEIRFQPLNQTKEYSGTEIM 180
+PP + + PL + +E +++
Sbjct: 390 RPPQDFKIIPLGR-REVKAKDLV 411
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 188 IRPHAVAAVLRNITLNE-ERYASFIELQDKLHQNICRKRTLVAIGTHDLDTIKGPFIYDA 246
+RP V AV+R + L F+ Q KLH+++C KRT+ I THDL ++GP +Y A
Sbjct: 330 VRPFFVGAVVRGMDLRPGNALKRFLSCQTKLHEDLCEKRTVATIATHDLGAVRGPLLYAA 389
Query: 247 KPPSEIRFQPLNQ 259
+PP + + PL +
Sbjct: 390 RPPQDFKIIPLGR 402
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 273 253 0.00083 114 3 11 22 0.46 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 566 (60 KB)
Total size of DFA: 159 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 22.66u 0.09s 22.75t Elapsed: 00:00:20
Total cpu time: 22.67u 0.09s 22.76t Elapsed: 00:00:21
Start: Thu Aug 15 12:44:46 2013 End: Thu Aug 15 12:45:07 2013