Query psy14338
Match_columns 1761
No_of_seqs 970 out of 4969
Neff 9.0
Searched_HMMs 13730
Date Fri Aug 16 17:23:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14338.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14338hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pg4a_ e.23.1.1 (A:) Acetyl-C 100.0 3.8E-71 2.7E-75 726.4 48.7 511 83-666 74-617 (643)
2 d1ry2a_ e.23.1.1 (A:) Acetyl-C 100.0 4.1E-69 3E-73 712.4 43.2 515 82-665 60-613 (640)
3 d1pg4a_ e.23.1.1 (A:) Acetyl-C 100.0 6.7E-68 4.9E-72 695.4 46.9 498 1179-1750 83-618 (643)
4 d1v25a_ e.23.1.1 (A:) Long cha 100.0 3.6E-67 2.6E-71 680.4 30.4 509 81-666 11-529 (534)
5 d1lcia_ e.23.1.1 (A:) Lucifera 100.0 2.5E-65 1.8E-69 664.7 46.5 499 81-666 17-538 (541)
6 d1ry2a_ e.23.1.1 (A:) Acetyl-C 100.0 6.8E-66 4.9E-70 681.5 36.5 499 1179-1749 70-614 (640)
7 d1amua_ e.23.1.1 (A:) Phenylal 100.0 4.8E-65 3.5E-69 657.3 43.3 487 80-662 22-509 (514)
8 d1lcia_ e.23.1.1 (A:) Lucifera 100.0 3E-63 2.2E-67 645.0 42.8 502 1160-1751 14-540 (541)
9 d1v25a_ e.23.1.1 (A:) Long cha 100.0 3.1E-64 2.2E-68 652.7 33.1 503 1163-1748 11-528 (534)
10 d1mdba_ e.23.1.1 (A:) Dihydrox 100.0 4E-63 2.9E-67 643.1 42.5 493 80-666 24-531 (536)
11 d1amua_ e.23.1.1 (A:) Phenylal 100.0 9.2E-62 6.7E-66 626.5 39.1 491 1154-1745 13-509 (514)
12 d1mdba_ e.23.1.1 (A:) Dihydrox 100.0 4.1E-61 3E-65 624.1 41.2 492 1162-1749 24-531 (536)
13 d3cw9a1 e.23.1.1 (A:1-503) 4-c 100.0 1.1E-58 8.1E-63 595.7 43.8 489 81-664 2-502 (503)
14 d3cw9a1 e.23.1.1 (A:1-503) 4-c 100.0 2.9E-57 2.1E-61 582.4 38.9 489 1163-1747 2-502 (503)
15 d1cdoa2 c.2.1.1 (A:165-339) Al 25.2 68 0.005 30.4 7.8 56 1220-1284 25-80 (175)
16 d1pl8a2 c.2.1.1 (A:146-316) Ke 23.2 1.2E+02 0.009 28.3 9.3 62 1213-1285 17-79 (171)
17 d2ayia1 e.60.1.1 (A:3-408) Ami 20.7 68 0.005 35.4 7.4 62 1204-1273 2-66 (406)
18 d2cfxa2 d.58.4.2 (A:64-140) Tr 20.0 1.5E+02 0.011 23.6 7.6 59 1660-1726 14-72 (77)
No 1
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=100.00 E-value=3.8e-71 Score=726.36 Aligned_cols=511 Identities=16% Similarity=0.162 Sum_probs=417.4
Q ss_pred HHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHHH
Q psy14338 83 LEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLC 162 (1761)
Q Consensus 83 l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~vv 162 (1761)
-+.+++++++.+||++|+++..+++...+++||+||+++++++|+.|+ ++||++||+|+++++|+ +++++
T Consensus 74 ~~n~ldrh~~~~~d~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~--------~~Gv~~Gd~V~i~~~n~--~e~iv 143 (643)
T d1pg4a_ 74 AANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLL--------DLGIKKGDVVAIYMPMV--PEAAV 143 (643)
T ss_dssp HHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEEECCSS--HHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHH--------HcCCCCCCEEEEecccc--hHHHH
Confidence 467788889999999999987655444579999999999999999999 89999999999999999 99999
Q ss_pred HHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccc----------------cccceeccC
Q psy14338 163 AFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTA----------------AGEVVAFKG 226 (1761)
Q Consensus 163 a~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~----------------~~~~~~~~~ 226 (1761)
++|||+++|++++|++|.++++ ++.+++++++++++|+++.......... ...++....
T Consensus 144 ~~lA~~~~Gav~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~ 218 (643)
T d1pg4a_ 144 AMLACARIGAVHSVIFGGFSPE-----AVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKR 218 (643)
T ss_dssp HHHHHHHHTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECS
T ss_pred HHHHHHHhCeEEEecCCCCCHH-----HHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEecc
Confidence 9999999999999999999977 8999999999999999876433221110 001111110
Q ss_pred C------CcceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHH-HHHHHHHcCCCCCCeEE
Q psy14338 227 W------PKLTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSH-CRALTQACHYTEGENMV 299 (1761)
Q Consensus 227 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l 299 (1761)
. ........................+++|+|||+|||||||+||||+++|++++.. .......++++++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~ 298 (643)
T d1pg4a_ 219 TGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYW 298 (643)
T ss_dssp SCCCCCCCBTTEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEE
T ss_pred CCcccccccccchhhhhhhcccCcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEE
Confidence 0 0000000111111112222334567899999999999999999999999997654 44556678999999999
Q ss_pred EccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCcee
Q psy14338 300 CVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLR 377 (1761)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr 377 (1761)
+++|++|++++...++.+|++|+++++.+.....+++..+++.|++++||++.++| +++..++.... ....++++||
T Consensus 299 ~~~p~~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~l~~l~~~~~~~~~~~dl~sLr 377 (643)
T d1pg4a_ 299 CTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAP-TAIRALMAEGDKAIEGTDRSSLR 377 (643)
T ss_dssp ECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECH-HHHHHHHTTGGGGTTTCCCTTCC
T ss_pred EeCChHHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehH-HHHHHHHhCcchhccccCCCceE
Confidence 99999999998755889999999999987433356899999999999999999985 58888876542 3456789999
Q ss_pred EEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCc
Q psy14338 378 LLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENS 457 (1761)
Q Consensus 378 ~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 457 (1761)
.+++| |++++++++++|.+.++..+++ ++|.||+||++.+++.....
T Consensus 378 ~i~~~--G~pl~~~~~~~~~~~~g~~~~~---i~~~yG~TE~g~~~~~~~~~---------------------------- 424 (643)
T d1pg4a_ 378 ILGSV--GEPINPEAWEWYWKKIGKEKCP---VVDTWWQTETGGFMITPLPG---------------------------- 424 (643)
T ss_dssp EEEEE--SSCCCHHHHHHHHHHTTTTCSC---EEEEBCCGGGSSCSBCCCTT----------------------------
T ss_pred EEEEE--eCCCCHHHHHHHHHHhCCCCce---EEEeechhhccceEEecCCC----------------------------
Confidence 99999 9999999999999998544444 99999999998655432210
Q ss_pred cCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEec--CCccccccCCCccccccccccccccCCCccCCCceE
Q psy14338 458 LTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYT 535 (1761)
Q Consensus 458 ~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~y 535 (1761)
....+.+++|+|++|++++|+|++|+ ++|.|+.|||+|+| |++++|||++++.+.+.|.. ..+|||
T Consensus 425 ~~~~~~gs~G~p~~g~~v~ivd~~g~--~~~~g~~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~----------~~~g~~ 492 (643)
T d1pg4a_ 425 AIELKAGSATRPFFGVQPALVDNEGH--PQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFS----------TFKNMY 492 (643)
T ss_dssp TCCBCTTCCBSBCTTCCEEEECTTCC--BCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHS----------SSTTSE
T ss_pred ccCCCCCccccccCCCEEEEECCCCC--CCCCCceEEEEEecCCCcccccccCChhhchhhhcc----------cCCCeE
Confidence 01234678999999999999999997 59999999999999 57899999999988887642 137899
Q ss_pred eecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCCC--
Q psy14338 536 RSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPDC-- 612 (1761)
Q Consensus 536 rTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~~-- 612 (1761)
+|||+|++|+||+|+|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++. .++.++|||+++++.
T Consensus 493 ~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~~~p~V-----~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~ 567 (643)
T d1pg4a_ 493 FSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKI-----AEAAVVGIPHAIKGQAIYAYVTLNHGEEP 567 (643)
T ss_dssp EEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCC
T ss_pred EcCCEEEECCCceEEEecccccEEEECCEEECHHHHHHHHHhCCCc-----ceEEEEEEECCCCCeEEEEEEEECCCCCC
Confidence 9999999999999999999999999999999999999999998888 79999999864 678999999988753
Q ss_pred CH---HHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 613 SE---EESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 613 ~~---~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
+. ++++++|+++|++||+|+.| +.+++||+|+||||+|++|++++..
T Consensus 568 ~~~~~~~i~~~~~~~L~~~~vP~~i-------~~v~~lP~T~sGKi~R~~Lr~~~~~ 617 (643)
T d1pg4a_ 568 SPELYAEVRNWVRKEIGPLATPDVL-------HWTDSLPKTRSGKIMRRILRKIAAG 617 (643)
T ss_dssp CHHHHHHHHHHHHHHTCGGGCCSEE-------EECSCCCBCTTSCBCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhhCCcccCccEE-------EEECCCCCCCCcCccHHHHHHHhcC
Confidence 33 47999999999999999986 5569999999999999999999865
No 2
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.1e-69 Score=712.40 Aligned_cols=515 Identities=16% Similarity=0.159 Sum_probs=413.4
Q ss_pred hHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhHH
Q psy14338 82 NLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFL 161 (1761)
Q Consensus 82 ~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~v 161 (1761)
..+.+++++|+++||++|+++.+++..+.+++||+||+++++++|+.|+. +.||++||+|+|+++|+ ++++
T Consensus 60 ~~~n~ldr~a~~~pd~~Ali~~~~~~g~~~~~Ty~eL~~~v~~~A~~L~~-------~~Gv~~Gd~V~i~~~n~--~e~~ 130 (640)
T d1ry2a_ 60 ACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTY-------SMGVRKGDTVAVYMPMV--PEAI 130 (640)
T ss_dssp HHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHH-------TSCCCTTCEEEECCCSS--HHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEEEecCCCCeeEEeHHHHHHHHHHHHHHHHH-------hcCCCCCCEEEEEeCCC--HHHH
Confidence 45889999999999999999865433333799999999999999999962 46899999999999999 9999
Q ss_pred HHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccce--------------ec--c
Q psy14338 162 CAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVV--------------AF--K 225 (1761)
Q Consensus 162 va~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~--------------~~--~ 225 (1761)
+++|||+++|+++||++|.++++ ++.++++++++++++++...............+ .. .
T Consensus 131 ~~~lA~~~~Gav~vpi~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (640)
T d1ry2a_ 131 ITLLAISRIGAIHSVVFAGFSSN-----SLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKT 205 (640)
T ss_dssp HHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSS
T ss_pred HHHHHhccCceEeecCCCCCCHH-----HHHHHHHhhhccccccchhhhhccchhhhHHHHHhhhhhhcccceeeeeccc
Confidence 99999999999999999999976 899999999999999987654332221100000 00 0
Q ss_pred CCCcc-----eeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCCeEE
Q psy14338 226 GWPKL-----TWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCR-ALTQACHYTEGENMV 299 (1761)
Q Consensus 226 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l 299 (1761)
..+.. ......................++|+|||+|||||||+||||+++|++++.... .....++++++|+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~h~~~~~~~~~~~~~~~~~~~~d~~l 285 (640)
T d1ry2a_ 206 NNPSVAFHAPRDLDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFF 285 (640)
T ss_dssp CCSSCCCCSSSEEEHHHHHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEE
T ss_pred ccccccccccccccccccccccccccccCCcccccCCEEEECCCCCCCCcceeeccccHHHHHHHHHHhhcCCCccccee
Confidence 00000 000000001111122233456789999999999999999999999999877654 444567899999999
Q ss_pred EccCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCC--CCCCCCCcee
Q psy14338 300 CVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKD--HKDISLSSLR 377 (1761)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~--~~~~~l~~Lr 377 (1761)
+++|++|+++....++.+|+.|+++++.+......++..+++.|+++++|++.++| +++..+..... ....++++||
T Consensus 286 ~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P-~~~~~l~~~~~~~~~~~~l~sLr 364 (640)
T d1ry2a_ 286 TAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAP-TALRLLKRAGDSYIENHSLKSLR 364 (640)
T ss_dssp ECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECH-HHHHHHTTSCTTSSSSCCCTTCC
T ss_pred eccchhhhhhHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHhCccEEEcCh-HHHHHHHhccccccccCCCCceE
Confidence 99999999997656889999999999987543346899999999999999999985 47777765432 3456799999
Q ss_pred EEEecCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCc
Q psy14338 378 LLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENS 457 (1761)
Q Consensus 378 ~v~~gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 457 (1761)
.+++| |+++++++.++|.+.++..+. .+++.||+||++..+...... .
T Consensus 365 ~v~~g--G~~l~~~~~~~~~~~~g~~~~---~i~~~yg~te~~~~~~~~~~~---------------------------~ 412 (640)
T d1ry2a_ 365 CLGSV--GEPIAAEVWEWYSEKIGKNEI---PIVDTYWQTESGSHLVTPLAG---------------------------G 412 (640)
T ss_dssp EEEEC--SSCCCHHHHHHHHHTTSCSSS---CEEECBCCTTTCSCSEECCTT---------------------------T
T ss_pred EEEEe--cccCcHHHHHHHHHhcCCCcc---eEEeeecccccccccccccCC---------------------------C
Confidence 99999 999999999999999854333 399999999998655433211 1
Q ss_pred cCcccccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEec--CCccccccCCCccccccccccccccCCCccCCCceE
Q psy14338 458 LTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVAS--TGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYT 535 (1761)
Q Consensus 458 ~~~~~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G--~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~y 535 (1761)
....+++++|+|++|++++|+|+++.+.+.+.+..|||+|+| |+++.|||++|+.|.+.|..+ .+|||
T Consensus 413 ~~~~~~gs~G~p~~g~~~~i~d~~~~~~~~~~~~~Gel~i~~~~p~~~~gy~~~~e~t~~~~~~~----------~~gw~ 482 (640)
T d1ry2a_ 413 VTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNP----------YPGYY 482 (640)
T ss_dssp CCCCCTTCCCEECTTCCEEEECSSSTTCEECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSS----------STTSE
T ss_pred cCCCCCcccccccCCceEEEEeCCCCcccCCCCceEEEEEEecCCCcccccccCHHHHHhhhccC----------CCCeE
Confidence 112356789999999999999998876566778889999998 689999999999999998632 37899
Q ss_pred eecceEEEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCC-
Q psy14338 536 RSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCS- 613 (1761)
Q Consensus 536 rTGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~- 613 (1761)
||||+|++|+||+|+|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++ ..++.++|||++.++..
T Consensus 483 ~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~~I~p~eIE~~l~~~p~V-----~~a~Vvg~~d~~~ge~~~a~Vv~~~~~~~ 557 (640)
T d1ry2a_ 483 FTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIV-----AECAVVGFNDDLTGQAVAAFVVLKNKSSW 557 (640)
T ss_dssp EEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHHHHHHHSSTTE-----EEEEEECCCCCTTSCCCEEEEEEC-----
T ss_pred EcCCceeECCCCCEEEEEcCCCEEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEECCCCCeEEEEEEEEcCCCCc
Confidence 9999999999999999999999999999999999999999998887 7999999985 47889999999876521
Q ss_pred -----------HHHHHHHHHHHHHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHH
Q psy14338 614 -----------EEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFL 665 (1761)
Q Consensus 614 -----------~~~l~~~l~~~Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~ 665 (1761)
.++++++++++|++||+|+.| +.+++||+|+||||+|++||+++.
T Consensus 558 ~~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i-------~~v~~lP~T~sGKi~R~~Lr~~~~ 613 (640)
T d1ry2a_ 558 STATDDELQDIKKHLVFTVRKDIGPFAAPKLI-------ILVDDLPKTRSGKIMRRILRKILA 613 (640)
T ss_dssp -------CCSHHHHHHHHHHHHTCTTTSCSEE-------EECSCCCBCTTSCBCHHHHHHSCC
T ss_pred cccchHHHHHHHHHHHHHHHhhCCCCCCceEE-------EEeCCCCCCCCcCccHHHHHHHHh
Confidence 256888899999999999986 556999999999999999998764
No 3
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=100.00 E-value=6.7e-68 Score=695.41 Aligned_cols=498 Identities=17% Similarity=0.160 Sum_probs=399.0
Q ss_pred CCCCCCCceEEccC-CCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCC
Q psy14338 1179 AGAPVPPGVSSVDT-RSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPP 1257 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d~-~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~ 1257 (1761)
+.+||++|+++... ....+++||+||.++++++|+.|++. ||++||+|+++++|++++++++|||+++|++++|++|.
T Consensus 83 ~~~~d~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~~~-Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~ 161 (643)
T d1pg4a_ 83 QENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDL-GIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGG 161 (643)
T ss_dssp HHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTT
T ss_pred HhCCCCEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCC
Confidence 35699999986432 24457899999999999999999999 99999999999999999999999999999999999987
Q ss_pred CCCCccCChHHHHHHHHhcCCeEEEechhHH---------HHHhh-hccc------cccccccCCccccCCCC-------
Q psy14338 1258 HPQNLQTTLPTVRMIVDVSKSVLVLSNQNVI---------KLLKS-KEAS------NVVDIKSWPTILDTDDM------- 1314 (1761)
Q Consensus 1258 ~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~---------~~~~~-~~~~------~~~~~~~~~~~~~~~~~------- 1314 (1761)
++.+ ++.+++++++++++|+++... ..... +... .++..............
T Consensus 162 ~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 235 (643)
T d1pg4a_ 162 FSPE------AVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRD 235 (643)
T ss_dssp SCHH------HHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEEEHHH
T ss_pred CCHH------HHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCcccccccccchhhhh
Confidence 7666 999999999999999875321 11111 0000 00000000000000000
Q ss_pred --ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHH-HHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1315 --PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSL-CRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1315 --~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
............++++++||+|||||||+||||+++|++++.. ...+...+++.++|+++..++++|.++..+.++.
T Consensus 236 ~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~ 315 (643)
T d1pg4a_ 236 LIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYG 315 (643)
T ss_dssp HHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHH
T ss_pred hhcccCcccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHH
Confidence 0000111223456889999999999999999999999996654 5556667899999999999999998888777889
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+|++|+++++.+.....+++..+++.|++++||+++++|++++.|++.. .......++++||.+++||+++++ +
T Consensus 316 ~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~-----~~~~~~~dl~sLr~i~~~G~pl~~-~ 389 (643)
T d1pg4a_ 316 PLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEG-----DKAIEGTDRSSLRILGSVGEPINP-E 389 (643)
T ss_dssp HHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTG-----GGGTTTCCCTTCCEEEEESSCCCH-H
T ss_pred HHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCc-----chhccccCCCceEEEEEEeCCCCH-H
Confidence 9999999999876444578999999999999999999999999998742 123356789999999999999999 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+.+ |.+.+.+++.||+||++.+++...... ...+.+++|+|++|++
T Consensus 390 ~~~~~~~~~---g~~~~~i~~~yG~TE~g~~~~~~~~~~-------------------------~~~~~gs~G~p~~g~~ 441 (643)
T d1pg4a_ 390 AWEWYWKKI---GKEKCPVVDTWWQTETGGFMITPLPGA-------------------------IELKAGSATRPFFGVQ 441 (643)
T ss_dssp HHHHHHHHT---TTTCSCEEEEBCCGGGSSCSBCCCTTT-------------------------CCBCTTCCBSBCTTCC
T ss_pred HHHHHHHHh---CCCCceEEEeechhhccceEEecCCCc-------------------------cCCCCCccccccCCCE
Confidence 777777665 444578999999999876554322110 0112356999999999
Q ss_pred EEEEcCCCCCCCCCCcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCC
Q psy14338 1552 VIIANPETKGQCGDSHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGA 1629 (1761)
Q Consensus 1552 ~~v~d~~~~~~~p~G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~ 1629 (1761)
++|+|++ +++++.|+.|||+|+| |++++|||| +++.+.+.|.. ..+|||+|||+|++ |+|
T Consensus 442 v~ivd~~-g~~~~~g~~Gel~v~~~~p~~~~~~~~---~~~~~~~~~~~------~~~g~~~TGDl~~~------d~d-- 503 (643)
T d1pg4a_ 442 PALVDNE-GHPQEGATEGNLVITDSWPGQARTLFG---DHERFEQTYFS------TFKNMYFSGDGARR------DED-- 503 (643)
T ss_dssp EEEECTT-CCBCCSSEEEEEEECSCCTTCCCEETT---CHHHHHHHHHS------SSTTSEEEEEEEEE------CTT--
T ss_pred EEEECCC-CCCCCCCceEEEEEecCCCcccccccC---Chhhchhhhcc------cCCCeEEcCCEEEE------CCC--
Confidence 9999966 8999999999999999 578999999 99988887742 35789999999999 999
Q ss_pred CCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCC-Cchh---H
Q psy14338 1630 PVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NESE---A 1700 (1761)
Q Consensus 1630 ~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~-~~~~---~ 1700 (1761)
|+ |+|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.+++||+++. ...+ .
T Consensus 504 ------G~----l~i~GR~dd~ik~~G~ri~p~eIE~-~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vv~~~~~~~~~~~~ 572 (643)
T d1pg4a_ 504 ------GY----YWITGRVDDVLNVSGHRLGTAEIES-ALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELY 572 (643)
T ss_dssp ------SC----EEEEEESSSEEEETTEEEEHHHHHH-HHHHSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHH
T ss_pred ------ce----EEEecccccEEEECCEEECHHHHHH-HHHhCCCcceEEEEEEECCCCCeEEEEEEEECCCCCCCHHHH
Confidence 99 9999999999999999999999999 8999999999999984 458999998753 2222 3
Q ss_pred hhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcC
Q psy14338 1701 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 1750 (1761)
Q Consensus 1701 ~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~ 1750 (1761)
.+|+++|+++ |+ .||+|+.|++++ +||+|+||||+|++|++++...
T Consensus 573 ~~i~~~~~~~-L~-~~~vP~~i~~v~--~lP~T~sGKi~R~~Lr~~~~~~ 618 (643)
T d1pg4a_ 573 AEVRNWVRKE-IG-PLATPDVLHWTD--SLPKTRSGKIMRRILRKIAAGD 618 (643)
T ss_dssp HHHHHHHHHH-TC-GGGCCSEEEECS--CCCBCTTSCBCHHHHHHHHHTC
T ss_pred HHHHHHHHhh-CC-cccCccEEEEEC--CCCCCCCcCccHHHHHHHhcCC
Confidence 5799999997 88 899999999999 9999999999999999998653
No 4
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=3.6e-67 Score=680.38 Aligned_cols=509 Identities=17% Similarity=0.189 Sum_probs=379.3
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
.+|+++|++.|+++||++|+++.+. |. .+++||+||+++++++|++|. +.|+++||+|+|+++|+ +++
T Consensus 11 ~~l~~~l~~~a~~~pd~~av~~~~~-g~-~~~~Ty~el~~~~~~~A~~L~--------~~Gv~~gd~V~i~~~n~--~e~ 78 (534)
T d1v25a_ 11 LNLWDFLERAAALFGRKEVVSRLHT-GE-VHRTTYAEVYQRARRLMGGLR--------ALGVGVGDRVATLGFNH--FRH 78 (534)
T ss_dssp CCTHHHHHHHHHHSTTCEEEEECTT-SC-EEEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HHH
T ss_pred CCHHHHHHHHHHHcCCCeEEEEecC-Cc-eEEEcHHHHHHHHHHHHHHHH--------HCCcCCCCEEEEEeCCC--HHH
Confidence 4799999999999999999998764 22 268999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc-----cceeccCCCcceeEEe
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG-----EVVAFKGWPKLTWFVT 235 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 235 (1761)
++++|||+++|+++||++|.++.+ ++.++++++++++++++............. ..+.............
T Consensus 79 ~~~~lA~~~~G~v~vpl~~~~~~~-----~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (534)
T d1v25a_ 79 LEAYFAVPGMGAVLHTANPRLSPK-----EIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAY 153 (534)
T ss_dssp HHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEH
T ss_pred HHHHHHHHHhCcEEEecCCCCCHH-----HHHHHHHhhccccccccchhhhhHHHHhhcccccceeEEeecccccccccc
Confidence 999999999999999999999876 899999999999999998765443322111 0010000000000000
Q ss_pred ccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHH--HHcCCCCCCeEEEccCCcchhhhHHH
Q psy14338 236 EHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALT--QACHYTEGENMVCVLDFKRETGLWHS 313 (1761)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~ 313 (1761)
... ...........++++++|+|||||||.||||+++|+++++.+.... ..+....++++++++|++|..++..
T Consensus 154 ~~~---~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~- 229 (534)
T d1v25a_ 154 EEA---LGEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCL- 229 (534)
T ss_dssp HHH---CCSCCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTH-
T ss_pred ccc---ccccccccccccCCcEEEEEecCCCCCccccccccchhhhhhhhhhhhcccccccccccccccchhhhccccc-
Confidence 000 1111233456788999999999999999999999999987664443 3445678899999999999999886
Q ss_pred HHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 314 i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
.+.++..|+++++.++ .+++..+...+.++++|++.++| +++..++........++++||.+++| |++++++..
T Consensus 230 ~~~~~~~g~~~v~~~~---~~~~~~~~~~~~~~~vt~~~~~p-~~~~~~~~~~~~~~~~~~~lr~~~~g--G~~~~~~~~ 303 (534)
T d1v25a_ 230 PYAATLVGAKQVLPGP---RLDPASLVELFDGEGVTFTAGVP-TVWLALADYLESTGHRLKTLRRLVVG--GSAAPRSLI 303 (534)
T ss_dssp HHHHHHHTCEEEECTT---CCSHHHHHHHHHHTTCCEEEECH-HHHHHHHHHHHHHTCCCSSCCEEEEC--SSCCCHHHH
T ss_pred cceeeeecceeeeccc---cccccccchhhhhccccccccCc-hhhhhhhhhhccccccccceeEEEEe--cCCCCHHHH
Confidence 7888888888888775 78999999999999999999996 47777766555556788999999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
++|.+. |. ++++.||+||++..++......... ...........+++|+|++|+
T Consensus 304 ~~~~~~----~~---~i~~~yG~te~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~G~p~~g~ 357 (534)
T d1v25a_ 304 ARFERM----GV---EVRQGYGLTETSPVVVQNFVKSHLE-------------------SLSEEEKLTLKAKTGLPIPLV 357 (534)
T ss_dssp HHHHHT----TC---EEEEEEECGGGSSEEEECCCCGGGT-------------------TSCHHHHHHHHTSCBEECTTC
T ss_pred HHHHHh----CC---eeeeeccccccccceeecccCcccc-------------------ccCccccccccccceeccCCc
Confidence 988764 44 3999999999987766543210000 000001123457899999999
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEe
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~G 553 (1761)
+++|+|+++++.+...|++|||+|+|+++++||+|+|+.|++.|. .+|||+|||+|++++||.|+|+|
T Consensus 358 ~~~i~d~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~~~------------~dg~~~TGDlg~~~~~G~l~~~G 425 (534)
T d1v25a_ 358 RLRVADEEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALT------------PDGFFRTGDIAVWDEEGYVEIKD 425 (534)
T ss_dssp EEEEECTTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBC------------TTSCEEEEEEEEECTTCCEEEEE
T ss_pred EEEEECCCCCCCCCCCCeeEEEEEcCCcccceecCChhhhhhhcc------------cCCCCccCceeEECCCccEEEec
Confidence 999999999864444588999999999999999999999999984 47899999999999999999999
Q ss_pred ccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC-CCHHHHH-HHHHHHHHHhhh
Q psy14338 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD-CSEEESF-QWMSRVLQAVDS 630 (1761)
Q Consensus 554 R~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~-~~~~~l~-~~l~~~Lp~y~~ 630 (1761)
|+||+||++|+||+|.|||++|.+++.| .+|+|+++++ ..++.++|+|+++.+ ...+++. .++++.||.|++
T Consensus 426 R~~~~i~~~G~~v~~~eIE~~l~~~~~V-----~~a~v~~~~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~~~~l~~~~~ 500 (534)
T d1v25a_ 426 RLKDLIKSGGEWISSVDLENALMGHPKV-----KEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEHLLKAGFAKWQL 500 (534)
T ss_dssp ESSCEEEETTEEEEHHHHHCC---------------CEEEEECSSSSEEEEECC-------------------CCCTTTS
T ss_pred ccccEEEECCEEECHHHHHHHHHhCCCc-----ceEEEEEEECCCCCeEEEEEEEeCCCCCCHHHHHHHHHHhcCCcCCC
Confidence 9999999999999999999999998888 7999999985 467889999987654 3334444 457888999999
Q ss_pred cceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 631 IHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 631 P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
|..| +.+++||+|+||||||++|+++|++
T Consensus 501 P~~i-------~~~~~lP~t~~GKi~R~~lr~~~~~ 529 (534)
T d1v25a_ 501 PDAY-------VFAEEIPRTSAGKFLKRALREQYKN 529 (534)
T ss_dssp CSBC---------------------CCTTHHHHSTT
T ss_pred ccEE-------EEECCCCCCCCccccHHHHHHHHHh
Confidence 9997 5679999999999999999998854
No 5
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=100.00 E-value=2.5e-65 Score=664.70 Aligned_cols=499 Identities=16% Similarity=0.214 Sum_probs=393.1
Q ss_pred hhHHHHHHHHhhhc---CCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCc
Q psy14338 81 RNLEAAIQRYGSAT---YKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDP 157 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~---pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~ 157 (1761)
.++.++|.+.++++ |+++|+.+.+. + +++||+||+++++++|+.|+ +.|+++||+|+|+++|+
T Consensus 17 ~t~~~~l~~~~~~~~~~P~~~a~~d~~~-~---~~lTy~el~~~~~~lA~~L~--------~~Gi~~Gd~Vai~~~ns-- 82 (541)
T d1lcia_ 17 GTAGEQLHKAMKRYALVPGTIAFTDAHI-E---VNITYAEYFEMSVRLAEAMK--------RYGLNTNHRIVVCSENS-- 82 (541)
T ss_dssp SCHHHHHHHHHHHHHTSTTCEEEEETTT-C---CEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEEECSSC--
T ss_pred CCHHHHHHHHHHhhCCCCCeEEEEeCCC-C---eEeeHHHHHHHHHHHHHHHH--------HcCcCCCCEEEEEeCCC--
Confidence 46677776666666 77778765332 2 58999999999999999999 89999999999999999
Q ss_pred hhHHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCccccc-----ccceeccCCC-cce
Q psy14338 158 INFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAA-----GEVVAFKGWP-KLT 231 (1761)
Q Consensus 158 ~~~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~ 231 (1761)
+++++++|||+++|+++||+++.++.+ ++.+++++++++++|+++...+.+..... ..++..+... ...
T Consensus 83 ~e~~v~~lA~~~~G~i~vpl~~~~~~~-----~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (541)
T d1lcia_ 83 LQFFMPVLGALFIGVAVAPANDIYNER-----ELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQG 157 (541)
T ss_dssp SSTHHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTT
T ss_pred HHHHHHHHHHHHhCeEEEecCCCCCHH-----HHHHHHHhccceEEeeeccccccchhccccccccceeeeecCCccccc
Confidence 999999999999999999999999976 89999999999999999876544322211 0111111110 000
Q ss_pred eEEe-----cccc--CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHc---CCCCCCeEEEc
Q psy14338 232 WFVT-----EHLA--KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQAC---HYTEGENMVCV 301 (1761)
Q Consensus 232 ~~~~-----~~~~--~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d~~l~~ 301 (1761)
+... .... .......+.....++++|||+|||||||.||||+++|++++....+....+ .+.++++++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (541)
T d1lcia_ 158 FQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSV 237 (541)
T ss_dssp BEEHHHHHHHHSCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEEC
T ss_pred cchhhhhhhhhccccccccccCccccCCCCceEEEEeeccccccccccccccchhhhhhhhhhhhccccccccccccccc
Confidence 0000 0000 111122233445678999999999999999999999999988777665443 56789999999
Q ss_pred cCCcchhhhHHHHHHHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEe
Q psy14338 302 LDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLV 381 (1761)
Q Consensus 302 ~~~~~~~~~~~~i~~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~ 381 (1761)
+|++|..++.. .+..+..|+++++.. ..++......+..+++|.+.++| .++..++........++++||.+++
T Consensus 238 ~p~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~t~~~~~p-~~~~~~~~~~~~~~~~~~~l~~v~~ 311 (541)
T d1lcia_ 238 VPFHHGFGMFT-TLGYLICGFRVVLMY----RFEEELFLRSLQDYKIQSALLVP-TLFSFFAKSTLIDKYDLSNLHEIAS 311 (541)
T ss_dssp SCTTSHHHHHH-HHHHHHHTCEEEECS----SCCHHHHHHHHHHTTCSEEECCH-HHHHHHHHCSCGGGSCCTTCCEEEC
T ss_pred ccccccccccc-ccccccccccccccc----ccccchhHHHHhhhhccccccCc-cccccccccccccccccccceEEEe
Confidence 99999999985 888899999988877 67899999999999999999986 4777777776666778899999999
Q ss_pred cCCCccCCHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcc
Q psy14338 382 GDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSL 461 (1761)
Q Consensus 382 gg~Ge~l~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (1761)
| |+++++...++|.+.++.. .++++||+||++..++..+.. ..
T Consensus 312 g--G~~~~~~~~~~~~~~~~~~-----~~~~~YG~TE~~~~~~~~~~~------------------------------~~ 354 (541)
T d1lcia_ 312 G--GAPLSKEVGEAVAKRFHLP-----GIRQGYGLTETTSAILITPEG------------------------------DD 354 (541)
T ss_dssp T--TCCCCHHHHHHHHHHTTCS-----CCBCEECCGGGSSCSEECCCC--------------------------------
T ss_pred c--ccccccccccccccccCCc-----eeeecCCccccCceEEecCcc------------------------------cC
Confidence 9 9999999999999988432 489999999998766544321 23
Q ss_pred cccccCCCCCCcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceE
Q psy14338 462 TLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLG 541 (1761)
Q Consensus 462 ~~~~iG~p~~~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~ 541 (1761)
+.+++|+|++|++++|+|++.. .++|.|++|||+|+|++++.||+++++.|...|. +++||+|||+|
T Consensus 355 ~~~svG~p~~~~~~~i~d~d~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~------------~~~~~~TGDl~ 421 (541)
T d1lcia_ 355 KPGAVGKVVPFFEAKVVDLDTG-KTLGVNQRGELCVRGPMIMSGYVNNPEATNALID------------KDGWLHSGDIA 421 (541)
T ss_dssp -CCCCBEECTTCEEEEECTTTC-CBCCTTCCEEEEEESTTSCSEETTBHHHHHHHBC------------TTSCEEEEEEE
T ss_pred CCCccccccCCCEEEEEECCCC-cCCCCCCeEEEEEccCccCCeeCCChhhhhhccc------------CCccccCCCee
Confidence 4678999999999999997654 3799999999999999999999999999988773 47999999999
Q ss_pred EEeCCCeEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC--CCHHHHH
Q psy14338 542 FLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD--CSEEESF 618 (1761)
Q Consensus 542 ~~~~dG~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~--~~~~~l~ 618 (1761)
++++||.++|+||+||+||++|+||+|.|||++|.+++.| .+|+|+++++ ..++.++|+|+..++ .+.++++
T Consensus 422 ~~~~~G~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~p~V-----~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~ 496 (541)
T d1lcia_ 422 YWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNI-----FDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIV 496 (541)
T ss_dssp EECTTCCEEEC-----CEEETTEEECHHHHHHHHHTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHH
T ss_pred EEcCCeEEEEeeeecCEEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHH
Confidence 9999999999999999999999999999999999998888 7999999985 467889999997654 6788999
Q ss_pred HHHHHHHHHh-hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 619 QWMSRVLQAV-DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 619 ~~l~~~Lp~y-~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
++|+++|++| |+|..+ +.+++||+|+||||||++|++++.+
T Consensus 497 ~~~~~~l~~~~~~p~~i-------~~v~~lP~t~~GKi~r~~l~~~~~~ 538 (541)
T d1lcia_ 497 DYVASQVTTAKKLRGGV-------VFVDEVPKGLTGKLDARKIREILIK 538 (541)
T ss_dssp HHHHHHSCGGGSCTTEE-------EEESSCCC-----CCHHHHHHHHHH
T ss_pred HHHHHhCCccccCCcEE-------EEeCCCCcCCCcCccHHHHHHHHHH
Confidence 9999999776 578876 4459999999999999999998864
No 6
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=6.8e-66 Score=681.46 Aligned_cols=499 Identities=16% Similarity=0.171 Sum_probs=394.3
Q ss_pred CCCCCCCceEEcc-CCCCceeeCHHHHHHHHHHHHHHHH-hhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCC
Q psy14338 1179 AGAPVPPGVSSVD-TRSAAQLLTCSQLHKRAERVGALLL-ERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRP 1256 (1761)
Q Consensus 1179 ~~~P~~~Av~~~d-~~~~~~~lTY~eL~~~a~~lA~~L~-~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp 1256 (1761)
+++||++|+++.. .....+++||+||.++++++|++|+ +. ||++||+|+|+++|++++++++|||+++|++++|++|
T Consensus 70 ~~~pd~~Ali~~~~~~g~~~~~Ty~eL~~~v~~~A~~L~~~~-Gv~~Gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpi~~ 148 (640)
T d1ry2a_ 70 LKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSM-GVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFA 148 (640)
T ss_dssp TTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTS-CCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCT
T ss_pred hhCCCCEEEEEEecCCCCeeEEeHHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEeCCCHHHHHHHHHhccCceEeecCCC
Confidence 4789999999753 2345689999999999999999997 56 9999999999999999999999999999999999999
Q ss_pred CCCCCccCChHHHHHHHHhcCCeEEEechhH---------HHHHhhhcccc-cc------ccccCCccccCCCC------
Q psy14338 1257 PHPQNLQTTLPTVRMIVDVSKSVLVLSNQNV---------IKLLKSKEASN-VV------DIKSWPTILDTDDM------ 1314 (1761)
Q Consensus 1257 ~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~---------~~~~~~~~~~~-~~------~~~~~~~~~~~~~~------ 1314 (1761)
.+|.+ ++.++++++++++++++... ...+....... .+ ..............
T Consensus 149 ~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (640)
T d1ry2a_ 149 GFSSN------SLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWAT 222 (640)
T ss_dssp TSCHH------HHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSSSEEEHHH
T ss_pred CCCHH------HHHHHHHhhhccccccchhhhhccchhhhHHHHHhhhhhhcccceeeeecccccccccccccccccccc
Confidence 87777 99999999999999987542 11111111000 00 00000000000000
Q ss_pred --ccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHH-HHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1315 --PKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR-SMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1315 --~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
..........+..+++++||+|||||||+||||+++|++++.... .....+++.++|+++..+|++|.++..+.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~h~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~ 302 (640)
T d1ry2a_ 223 EKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYG 302 (640)
T ss_dssp HHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHHHTTHH
T ss_pred cccccccccccCCcccccCCEEEECCCCCCCCcceeeccccHHHHHHHHHHhhcCCCcccceeeccchhhhhhHHHHHHH
Confidence 000011122345678999999999999999999999999777654 44456789999999999999999988778889
Q ss_pred HhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHH
Q psy14338 1392 SVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIH 1471 (1761)
Q Consensus 1392 ~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~ 1471 (1761)
+|+.|+++++.+......++..+++.|++++||+++++|++++.|.+.. .......++++||.+++||+++++ +
T Consensus 303 ~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-----~~~~~~~~l~sLr~v~~gG~~l~~-~ 376 (640)
T d1ry2a_ 303 PLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAG-----DSYIENHSLKSLRCLGSVGEPIAA-E 376 (640)
T ss_dssp HHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSC-----TTSSSSCCCTTCCEEEECSSCCCH-H
T ss_pred HHHhCCEEEEecCCCCCCCHHHHHHHHHHhCccEEEcChHHHHHHHhcc-----ccccccCCCCceEEEEEecccCcH-H
Confidence 9999999999886555568999999999999999999999999986632 122356789999999999999999 7
Q ss_pred HHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcE
Q psy14338 1472 LTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551 (1761)
Q Consensus 1472 l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 1551 (1761)
+.+++.+. +|.++..+++.||+||++..+....... ....+.+++|+|++|++
T Consensus 377 ~~~~~~~~---~g~~~~~i~~~yg~te~~~~~~~~~~~~------------------------~~~~~~gs~G~p~~g~~ 429 (640)
T d1ry2a_ 377 VWEWYSEK---IGKNEIPIVDTYWQTESGSHLVTPLAGG------------------------VTPMKPGSASFPFFGID 429 (640)
T ss_dssp HHHHHHHT---TSCSSSCEEECBCCTTTCSCSEECCTTT------------------------CCCCCTTCCCEECTTCC
T ss_pred HHHHHHHh---cCCCcceEEeeecccccccccccccCCC------------------------cCCCCCcccccccCCce
Confidence 77777665 4555678999999999765443322111 11122356999999999
Q ss_pred EEEEcCCCCCC-CCCCcceEEEEcC--CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCC
Q psy14338 1552 VIIANPETKGQ-CGDSHLGEIWVQS--PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAG 1628 (1761)
Q Consensus 1552 ~~v~d~~~~~~-~p~G~~GEL~i~g--~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~ 1628 (1761)
++|+|++++.. .+.+..|||+|+| |+++.|||+ +|+.|.+.|.. +.+|||+|||+|++ |+|
T Consensus 430 ~~i~d~~~~~~~~~~~~~Gel~i~~~~p~~~~gy~~---~~e~t~~~~~~------~~~gw~~TGDlg~~------d~d- 493 (640)
T d1ry2a_ 430 AVVLDPNTGEELNTSHAEGVLAVKAAWPSFARTIWK---NHDRYLDTYLN------PYPGYYFTGDGAAK------DKD- 493 (640)
T ss_dssp EEEECSSSTTCEECSSCEEEEEESSCCTTSCCEETT---CHHHHHHHHTS------SSTTSEEEEEEEEE------CTT-
T ss_pred EEEEeCCCCcccCCCCceEEEEEEecCCCccccccc---CHHHHHhhhcc------CCCCeEEcCCceeE------CCC-
Confidence 99999876654 4567789999998 689999999 99999999853 35789999999999 999
Q ss_pred CCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCch-----
Q psy14338 1629 APVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNES----- 1698 (1761)
Q Consensus 1629 ~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~----- 1698 (1761)
|+ |+|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++|||+++....
T Consensus 494 -------G~----l~i~GR~dd~Ik~~G~~I~p~eIE~-~l~~~p~V~~a~Vvg~~d~~~ge~~~a~Vv~~~~~~~~~~~ 561 (640)
T d1ry2a_ 494 -------GY----IWILGRVDDVVNVSGHRLSTAEIEA-AIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKNKSSWSTAT 561 (640)
T ss_dssp -------CC----EEECSCTTSCBCSSSCCBCHHHHHH-HHHSSTTEEEEEEECCCCCTTSCCCEEEEEEC---------
T ss_pred -------CC----EEEEEcCCCEEEECCEEECHHHHHH-HHHhCCCccEEEEEEEECCCCCeEEEEEEEEcCCCCccccc
Confidence 99 9999999999999999999999999 8999999999999984 457899988753211
Q ss_pred ------hHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1699 ------EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1699 ------~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
-.++|+++++++ |+ .||+|+.|++++ +||+|+||||+|++|++++.+
T Consensus 562 ~~~~~~l~~~l~~~~~~~-L~-~~~~P~~i~~v~--~lP~T~sGKi~R~~Lr~~~~~ 614 (640)
T d1ry2a_ 562 DDELQDIKKHLVFTVRKD-IG-PFAAPKLIILVD--DLPKTRSGKIMRRILRKILAG 614 (640)
T ss_dssp ---CCSHHHHHHHHHHHH-TC-TTTSCSEEEECS--CCCBCTTSCBCHHHHHHSCC-
T ss_pred hHHHHHHHHHHHHHHHhh-CC-CCCCceEEEEeC--CCCCCCCcCccHHHHHHHHhC
Confidence 124678888887 88 999999999999 999999999999999998743
No 7
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=100.00 E-value=4.8e-65 Score=657.34 Aligned_cols=487 Identities=15% Similarity=0.196 Sum_probs=411.0
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
..||+++|+++|+++||++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ .+
T Consensus 22 ~~tl~~l~~~~a~~~Pd~~Al~~~~------~~~Ty~eL~~~v~~lA~~L~--------~~Gv~~gd~Vai~~~n~--~~ 85 (514)
T d1amua_ 22 DKTIHQLFEEQVSKRPNNVAIVCEN------EQLTYHELNVKANQLARIFI--------EKGIGKDTLVGIMMEKS--ID 85 (514)
T ss_dssp TCCHHHHHHHHHHHCTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSS--HH
T ss_pred CCcHHHHHHHHHHhCCCCeEEEECC------eeEcHHHHHHHHHHHHHHHH--------HcCcCCcCEEEEEeCCC--HH
Confidence 4689999999999999999999865 79999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccccceeccCCCcceeEEecccc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLA 239 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1761)
|++++|||+++|++++|++|.++.+ ++.+++++++++++|++......+.......... .......
T Consensus 86 ~v~~~la~~~~G~v~v~l~~~~~~~-----~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 151 (514)
T d1amua_ 86 LFIGILAVLKAGGAYVPIDIEYPKE-----RIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVE---------IFEEDTI 151 (514)
T ss_dssp HHHHHHHHHHTTCEEEECCTTSCHH-----HHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEE---------ECCCSTT
T ss_pred HHHHHHHHHHhCcEEEEeCCCCCHH-----HHHHHHhccCCcEEEEehhhhhhhhhhccccccc---------ccccccc
Confidence 9999999999999999999999976 8999999999999999987655443322111100 0011111
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhhhHHHHHHHHh
Q psy14338 240 KTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVL 319 (1761)
Q Consensus 240 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~i~~~L~ 319 (1761)
.............++++|+|+|||||||.||||+++|+++...+......+++..+++++.++|++|..+++. ++.+++
T Consensus 152 ~~~~~~~~~~p~~~~d~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~ 230 (514)
T d1amua_ 152 KIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWE-MFMALL 230 (514)
T ss_dssp TTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHH-HHHHHT
T ss_pred cccccccCCCCCCcccceEEEEccCCCCCcccccccccccccccccccccccccccccccceecccccccccc-cccccc
Confidence 1111122233457899999999999999999999999999999999999999999999999999999999995 999999
Q ss_pred cCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccCCHHHHHHHHHH
Q psy14338 320 NGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSV 399 (1761)
Q Consensus 320 ~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~~~~~~~ 399 (1761)
.|+++++.+... ..+...+++.+..+.++.+..+| +.. .. ....+++++|.+++| |+++++++.+++.+.
T Consensus 231 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-----~~~~~~~~l~~~~~~--G~~~~~~~~~~~~~~ 300 (514)
T d1amua_ 231 TGASLYIILKDT-INDFVKFEQYINQKEITVITLPP-TYV-VH-----LDPERILSIQTLITA--GSATSPSLVNKWKEK 300 (514)
T ss_dssp TTCEEEECCHHH-HTCHHHHHHHHHHTTCCEEEECH-HHH-TT-----SCTTTCCSCSEEEEE--SSCCCHHHHHHHTTT
T ss_pred cccccccccccc-ccchhhhhhhhhhhhccccccee-eec-cc-----ccccccccccEEEEe--cccCCHHHhhhhccc
Confidence 999999987433 46778889999999999998874 232 21 224568899999999 999999999887664
Q ss_pred hhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCcEEEEEe
Q psy14338 400 FQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVK 479 (1761)
Q Consensus 400 ~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d 479 (1761)
+ .+++.||+||++.+++..... ........+.|+++++..+.+.|
T Consensus 301 ~--------~~~~~yG~tE~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~v~~~d 345 (514)
T d1amua_ 301 V--------TYINAYGPTETTICATTWVAT---------------------------KETIGHSVPIGAPIQNTQIYIVD 345 (514)
T ss_dssp S--------EEEEEECCGGGSSCSEEEECC---------------------------SSCCCSSCCCBEECTTEEEEEEC
T ss_pred e--------eEEEeeccccCceeeeecccc---------------------------ccccCcccccccceeeeeEeeec
Confidence 3 399999999998765543321 01122356789999999999999
Q ss_pred CCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEEeccCCeE
Q psy14338 480 MDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSRDGLM 559 (1761)
Q Consensus 480 ~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv 559 (1761)
++++ ++|.|+.|||+|+||.+++||+++|+.+.++|..+++..+ ++||+|||+|++|+||+|+|+||+||+|
T Consensus 346 ~~~~--~~~~g~~GEl~v~~~~~~~gY~~~~~~~~~~~~~~~~~~~------~~~~~TGD~g~~d~~G~l~i~GR~~d~i 417 (514)
T d1amua_ 346 ENLQ--LKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPG------EKLYKTGDQARWLSDGNIEYLGRIDNQV 417 (514)
T ss_dssp TTSC--BCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTT------SEEEEEEEEEEECTTSCEEEEEEGGGEE
T ss_pred ccce--ecCCCCeeEEEEccCcccccccccccccceeeEeccccCC------CceEEECCEEEECCCCcEEEEecccCEE
Confidence 9987 5999999999999999999999999999999998888644 8999999999999999999999999999
Q ss_pred EECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcceeeeeE
Q psy14338 560 TVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYC 638 (1761)
Q Consensus 560 ki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~~~~~~l~~~l~~~Lp~y~~P~~i~~~~ 638 (1761)
|++|++|+|.+||+.|.+++.| .+|+|++.++ ..++.++|+++++++.+.++++++++++|++|++|..+
T Consensus 418 ~~~G~~i~p~~IE~~l~~~~~V-----~~~~V~~~~~~~~g~~~~a~v~~~~~~~~~~l~~~~~~~l~~~~~p~~i---- 488 (514)
T d1amua_ 418 KIRGHRVELEEVESILLKHMYI-----SETAVSVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEELPTYMIPSYF---- 488 (514)
T ss_dssp EETTEEEEHHHHHHHHTTSTTE-----EEEEEEEEECTTSCEEEEEEEEESSCCCHHHHHHHHHHHSCGGGSCSEE----
T ss_pred EECCEEECHHHHHHHHHhCCCc-----cEEEEEEEECCCCCEEEEEEEEcCCCCCHHHHHHHHHhhCCcccCceEE----
Confidence 9999999999999999998888 7999999985 47789999999999999999999999999999999986
Q ss_pred EEEeCCCCccCCCCCcccHHHHHH
Q psy14338 639 LALVPPNYLPKTPLGGIHLSECKR 662 (1761)
Q Consensus 639 v~~v~~~~lP~t~~GKidR~~L~~ 662 (1761)
+.+++||+|++|||+|++|++
T Consensus 489 ---~~v~~lP~t~~GKi~R~~L~~ 509 (514)
T d1amua_ 489 ---IQLDKMPLTSNGKIDRKQLPE 509 (514)
T ss_dssp ---EECSSCCBCTTSSBCGGGSCC
T ss_pred ---EEeCCCCCCCCcChhHHhcCC
Confidence 557999999999999999886
No 8
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=100.00 E-value=3e-63 Score=645.01 Aligned_cols=502 Identities=15% Similarity=0.233 Sum_probs=386.1
Q ss_pred ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHH
Q psy14338 1160 LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLIC 1239 (1761)
Q Consensus 1160 ~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iv 1239 (1761)
..+.++++.|.+.+... +..|+.+|+.. . ..++++||+||+++++++|+.|++. ||++||+|+|+++|++++++
T Consensus 14 ~~~~t~~~~l~~~~~~~--~~~P~~~a~~d--~-~~~~~lTy~el~~~~~~lA~~L~~~-Gi~~Gd~Vai~~~ns~e~~v 87 (541)
T d1lcia_ 14 LEDGTAGEQLHKAMKRY--ALVPGTIAFTD--A-HIEVNITYAEYFEMSVRLAEAMKRY-GLNTNHRIVVCSENSLQFFM 87 (541)
T ss_dssp CCSSCHHHHHHHHHHHH--HTSTTCEEEEE--T-TTCCEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEEECSSCSSTHH
T ss_pred CCCCCHHHHHHHHHHhh--CCCCCeEEEEe--C-CCCeEeeHHHHHHHHHHHHHHHHHc-CcCCCCEEEEEeCCCHHHHH
Confidence 33456676666665411 13377777662 2 3457899999999999999999999 99999999999999999999
Q ss_pred HHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccc----c-cccc------ccCCcc
Q psy14338 1240 AFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEAS----N-VVDI------KSWPTI 1308 (1761)
Q Consensus 1240 a~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----~-~~~~------~~~~~~ 1308 (1761)
++|||+++|+++|||++.++.+ ++.+++++++++++|++.+..+.+...... . ++.. ..+...
T Consensus 88 ~~lA~~~~G~i~vpl~~~~~~~------~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (541)
T d1lcia_ 88 PVLGALFIGVAVAPANDIYNER------ELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSM 161 (541)
T ss_dssp HHHHHHHHTCEEEECCTTCCHH------HHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTBEEH
T ss_pred HHHHHHHhCeEEEecCCCCCHH------HHHHHHHhccceEEeeeccccccchhccccccccceeeeecCCccccccchh
Confidence 9999999999999998877776 999999999999999999876655443211 0 0000 000000
Q ss_pred c---cC--CCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHc---CcCCCCeEEEEeCCc
Q psy14338 1309 L---DT--DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPY 1380 (1761)
Q Consensus 1309 ~---~~--~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~~~~~~~~ 1380 (1761)
. .. ..........+.....++++|||+|||||||.||||+++|++++....+....+ .+.++++++.+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 241 (541)
T d1lcia_ 162 YTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFH 241 (541)
T ss_dssp HHHHHHHSCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTT
T ss_pred hhhhhhhccccccccccCccccCCCCceEEEEeeccccccccccccccchhhhhhhhhhhhccccccccccccccccccc
Confidence 0 00 000000011112334678999999999999999999999999988777665544 466778888888877
Q ss_pred cChhHHHHHHHHhhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEE
Q psy14338 1381 CGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTC 1460 (1761)
Q Consensus 1381 ~~~~~~~~~~~~L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v 1460 (1761)
|..+. ...+..+..|+.+++... .++......+.++++|.++++|+++..+++.. .....++++|+.+
T Consensus 242 ~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~-------~~~~~~~~~l~~v 309 (541)
T d1lcia_ 242 HGFGM-FTTLGYLICGFRVVLMYR----FEEELFLRSLQDYKIQSALLVPTLFSFFAKST-------LIDKYDLSNLHEI 309 (541)
T ss_dssp SHHHH-HHHHHHHHHTCEEEECSS----CCHHHHHHHHHHTTCSEEECCHHHHHHHHHCS-------CGGGSCCTTCCEE
T ss_pred ccccc-cccccccccccccccccc----cccchhHHHHhhhhccccccCccccccccccc-------cccccccccceEE
Confidence 76665 567777888888887764 68899999999999999999999999987642 2345678899999
Q ss_pred EeecCCCChHHHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccce
Q psy14338 1461 VVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCL 1540 (1761)
Q Consensus 1461 ~~gGe~l~~~~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1540 (1761)
++||+++++ .+.+++.+.++. ..+++.||+||++..++..... ..+.
T Consensus 310 ~~gG~~~~~-~~~~~~~~~~~~-----~~~~~~YG~TE~~~~~~~~~~~---------------------------~~~~ 356 (541)
T d1lcia_ 310 ASGGAPLSK-EVGEAVAKRFHL-----PGIRQGYGLTETTSAILITPEG---------------------------DDKP 356 (541)
T ss_dssp ECTTCCCCH-HHHHHHHHHTTC-----SCCBCEECCGGGSSCSEECCCC------------------------------C
T ss_pred Eeccccccc-ccccccccccCC-----ceeeecCCccccCceEEecCcc---------------------------cCCC
Confidence 999999999 777888777653 4578999999987654432211 1123
Q ss_pred eccccccCCcEEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEec
Q psy14338 1541 LESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRR 1620 (1761)
Q Consensus 1541 ~~iG~p~~~~~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~ 1620 (1761)
+++|+|++|++++|+|+|++++++.|++|||+|+|++++.||+| +++.+...| .++|||+|||+|++
T Consensus 357 ~svG~p~~~~~~~i~d~d~~~~~~~g~~Gel~v~g~~~~~gY~~---~~~~~~~~~--------~~~~~~~TGDl~~~-- 423 (541)
T d1lcia_ 357 GAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGYVN---NPEATNALI--------DKDGWLHSGDIAYW-- 423 (541)
T ss_dssp CCCBEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETT---BHHHHHHHB--------CTTSCEEEEEEEEE--
T ss_pred CccccccCCCEEEEEECCCCcCCCCCCeEEEEEccCccCCeeCC---Chhhhhhcc--------cCCccccCCCeeEE--
Confidence 46999999999999999989999999999999999999999999 999998887 46899999999999
Q ss_pred cCCCCCCCCCCCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-
Q psy14338 1621 TSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD- 1694 (1761)
Q Consensus 1621 ~~~~d~d~~~~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~- 1694 (1761)
|+| |. ++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. +++++++|+++
T Consensus 424 ----~~~--------G~----~~~~GR~~d~i~~~G~~v~~~~IE~-~l~~~p~V~~~~v~~~~~~~~g~~~~a~v~~~~ 486 (541)
T d1lcia_ 424 ----DED--------EH----FFIVDRLKSLIKYKGYQVAPAELES-ILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEH 486 (541)
T ss_dssp ----CTT--------CC----EEEC-----CEEETTEEECHHHHHH-HHHTSTTEEEEEEEEEEETTTEEEEEEEEEECT
T ss_pred ----cCC--------eE----EEEeeeecCEEEECCEEECHHHHHH-HHHhCCCccEEEEEEEECCCCCEEEEEEEEECC
Confidence 999 99 9999999999999999999999999 8999999999999974 34788888874
Q ss_pred CCchhHhhHHHHHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHcCC
Q psy14338 1695 GNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 1751 (1761)
Q Consensus 1695 ~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~~~ 1751 (1761)
+...+.++|+++|+++ |++.+|+|..|++++ +||+|++|||||++|++++.+.+
T Consensus 487 ~~~~~~~~l~~~~~~~-l~~~~~~p~~i~~v~--~lP~t~~GKi~r~~l~~~~~~~~ 540 (541)
T d1lcia_ 487 GKTMTEKEIVDYVASQ-VTTAKKLRGGVVFVD--EVPKGLTGKLDARKIREILIKAK 540 (541)
T ss_dssp TCCCCHHHHHHHHHHH-SCGGGSCTTEEEEES--SCCC-----CCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHh-CCccccCCcEEEEeC--CCCcCCCcCccHHHHHHHHHHhC
Confidence 4566778999999998 664778999999999 99999999999999999986643
No 9
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=3.1e-64 Score=652.74 Aligned_cols=503 Identities=18% Similarity=0.193 Sum_probs=365.5
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
.++++.|.+.+. ++||++|+++.+. ++.+++||+||+++++++|++|.+. |+++||+|+|+++|++++++++|
T Consensus 11 ~~l~~~l~~~a~-----~~pd~~av~~~~~-g~~~~~Ty~el~~~~~~~A~~L~~~-Gv~~gd~V~i~~~n~~e~~~~~l 83 (534)
T d1v25a_ 11 LNLWDFLERAAA-----LFGRKEVVSRLHT-GEVHRTTYAEVYQRARRLMGGLRAL-GVGVGDRVATLGFNHFRHLEAYF 83 (534)
T ss_dssp CCTHHHHHHHHH-----HSTTCEEEEECTT-SCEEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSSHHHHHHHH
T ss_pred CCHHHHHHHHHH-----HcCCCeEEEEecC-CceEEEcHHHHHHHHHHHHHHHHHC-CcCCCCEEEEEeCCCHHHHHHHH
Confidence 357776666654 7899999997664 3557899999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccc-cc--cccCCccccCCCC--ccc
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNV-VD--IKSWPTILDTDDM--PKK 1317 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~--~~~ 1317 (1761)
||+++|++++|++|.++.+ ++.++++++++++++++............... +. ............. ...
T Consensus 84 A~~~~G~v~vpl~~~~~~~------~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (534)
T d1v25a_ 84 AVPGMGAVLHTANPRLSPK------EIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEAL 157 (534)
T ss_dssp HHHHTTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEHHHHC
T ss_pred HHHHhCcEEEecCCCCCHH------HHHHHHHhhccccccccchhhhhHHHHhhcccccceeEEeecccccccccccccc
Confidence 9999999999999977666 99999999999999999887776655432211 00 0000000000000 000
Q ss_pred hhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHH--HHcCcCCCCeEEEEeCCccChhHHHHHHHHhhc
Q psy14338 1318 KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK--LACELYPSRHIALCLDPYCGLGFALWVLSSVYS 1395 (1761)
Q Consensus 1318 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~L~~ 1395 (1761)
..........++++++|+|||||||.||||+++|++++....... ..+.+...++++..+|++|..+. ...+.++..
T Consensus 158 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~-~~~~~~~~~ 236 (534)
T d1v25a_ 158 GEEADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAW-CLPYAATLV 236 (534)
T ss_dssp CSCCCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHH-THHHHHHHH
T ss_pred cccccccccccCCcEEEEEecCCCCCccccccccchhhhhhhhhhhhcccccccccccccccchhhhccc-cccceeeee
Confidence 011122345678999999999999999999999999987664433 34455677788888887777666 557778888
Q ss_pred CceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHH
Q psy14338 1396 GHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSA 1475 (1761)
Q Consensus 1396 G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~ 1475 (1761)
|+++++.++ .+++..+...+.++++|++.++|+++..+++.. .....++++||.+++||+++++ ...++
T Consensus 237 g~~~v~~~~---~~~~~~~~~~~~~~~vt~~~~~p~~~~~~~~~~-------~~~~~~~~~lr~~~~gG~~~~~-~~~~~ 305 (534)
T d1v25a_ 237 GAKQVLPGP---RLDPASLVELFDGEGVTFTAGVPTVWLALADYL-------ESTGHRLKTLRRLVVGGSAAPR-SLIAR 305 (534)
T ss_dssp TCEEEECTT---CCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHH-------HHHTCCCSSCCEEEECSSCCCH-HHHHH
T ss_pred cceeeeccc---cccccccchhhhhccccccccCchhhhhhhhhh-------ccccccccceeEEEEecCCCCH-HHHHH
Confidence 888888775 579999999999999999999999999997642 3456789999999999999998 67666
Q ss_pred HHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEE
Q psy14338 1476 FSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIA 1555 (1761)
Q Consensus 1476 ~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~ 1555 (1761)
+.++ | ..+++.||+||++..+.............. .......+++|+|++|++++|+
T Consensus 306 ~~~~----~---~~i~~~yG~te~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~G~p~~g~~~~i~ 362 (534)
T d1v25a_ 306 FERM----G---VEVRQGYGLTETSPVVVQNFVKSHLESLSE----------------EEKLTLKAKTGLPIPLVRLRVA 362 (534)
T ss_dssp HHHT----T---CEEEEEEECGGGSSEEEECCCCGGGTTSCH----------------HHHHHHHTSCBEECTTCEEEEE
T ss_pred HHHh----C---CeeeeeccccccccceeecccCccccccCc----------------cccccccccceeccCCcEEEEE
Confidence 6543 3 479999999999887766544322111100 0001123569999999999999
Q ss_pred cCCCCCCCCC--CcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCC
Q psy14338 1556 NPETKGQCGD--SHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPP 1633 (1761)
Q Consensus 1556 d~~~~~~~p~--G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~ 1633 (1761)
|++ ++.+|. |++|||+|+|++++.||+| +|+.|++.| ..+|||+|||+|++ ++|
T Consensus 363 d~~-~~~~~~~~~~~Gel~v~g~~v~~gY~~---~~~~t~~~~--------~~dg~~~TGDlg~~------~~~------ 418 (534)
T d1v25a_ 363 DEE-GRPVPKDGKALGEVQLKGPWITGGYYG---NEEATRSAL--------TPDGFFRTGDIAVW------DEE------ 418 (534)
T ss_dssp CTT-SCBCCSSSCCCEEEEEESTTSBSSCBT---CHHHHHTTB--------CTTSCEEEEEEEEE------CTT------
T ss_pred CCC-CCCCCCCCCeeEEEEEcCCcccceecC---Chhhhhhhc--------ccCCCCccCceeEE------CCC------
Confidence 966 777766 7899999999999999999 999999998 46889999999999 999
Q ss_pred CCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHHH-H
Q psy14338 1634 GVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPL-V 1707 (1761)
Q Consensus 1634 g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~~-l 1707 (1761)
|+ ++|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++|+|+.++.....+++++. +
T Consensus 419 --G~----l~~~GR~~~~i~~~G~~v~~~eIE~-~l~~~~~V~~a~v~~~~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~ 491 (534)
T d1v25a_ 419 --GY----VEIKDRLKDLIKSGGEWISSVDLEN-ALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEHLL 491 (534)
T ss_dssp --CC----EEEEEESSCEEEETTEEEEHHHHHC-C----------CEEEEECSSSSEEEEECC-----------------
T ss_pred --cc----EEEecccccEEEECCEEECHHHHHH-HHHhCCCcceEEEEEEECCCCCeEEEEEEEeCCCCCCHHHHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 44788888876655555666665 5
Q ss_pred HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHH
Q psy14338 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1748 (1761)
Q Consensus 1708 ~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~ 1748 (1761)
++ .|| .|++|+.|++++ +||+|++|||||++|++++.
T Consensus 492 ~~-~l~-~~~~P~~i~~~~--~lP~t~~GKi~R~~lr~~~~ 528 (534)
T d1v25a_ 492 KA-GFA-KWQLPDAYVFAE--EIPRTSAGKFLKRALREQYK 528 (534)
T ss_dssp ---CCC-TTTSCSBC----------------CCTTHHHHST
T ss_pred Hh-cCC-cCCCccEEEEEC--CCCCCCCccccHHHHHHHHH
Confidence 55 488 999999999999 99999999999999999874
No 10
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=4e-63 Score=643.07 Aligned_cols=493 Identities=17% Similarity=0.202 Sum_probs=405.6
Q ss_pred chhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchh
Q psy14338 80 PRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPIN 159 (1761)
Q Consensus 80 ~~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~ 159 (1761)
++||+++|+++|+++||++|+++.+ +++||+||+++++++|+.|+ +.|+++||+|+|+++|+ ++
T Consensus 24 ~~tl~~~l~~~a~~~pd~~Al~~~~------~~~Ty~el~~~v~~~A~~L~--------~~Gv~~gd~V~i~~~n~--~~ 87 (536)
T d1mdba_ 24 GETFGDLLRDRAAKYGDRIAITCGN------THWSYRELDTRADRLAAGFQ--------KLGIQQKDRVVVQLPNI--KE 87 (536)
T ss_dssp SCCHHHHHHHHHHHHTTSEEEEETT------EEEEHHHHHHHHHHHHHHHH--------HHTCCTTCEEEECCCSS--HH
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECC------EeEcHHHHHHHHHHHHHHHH--------HcCcCCcCEEEEEeCCC--HH
Confidence 3689999999999999999999765 69999999999999999999 89999999999999999 99
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccCcccccc----------cceeccCCCc
Q psy14338 160 FLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAG----------EVVAFKGWPK 229 (1761)
Q Consensus 160 ~vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~----------~~~~~~~~~~ 229 (1761)
+++++|||+++|+++||++|.++.+ ++.+++++++++++++++............ ..+.......
T Consensus 88 ~~v~~lA~~~~G~i~vpl~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (536)
T d1mdba_ 88 FFEVIFALFRLGALPVFALPSHRSS-----EITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEE 162 (536)
T ss_dssp HHHHHHHHHHHTCEEEECCTTCCHH-----HHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCTT
T ss_pred HHHHHHHHHHhCcEEEecCCCCCHH-----HHHHHHHhhccceEeccchhhhhhhhhhhhhhhhccccccceeeeecccc
Confidence 9999999999999999999999976 899999999999999987644322111100 0000000000
Q ss_pred ceeEEeccccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCCeEEEccCCcchhh
Q psy14338 230 LTWFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETG 309 (1761)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 309 (1761)
. .................++|+|+|+|||||||+||||++||+++.+.+......+++.++|+++++.|+.|.++
T Consensus 163 --~---~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 237 (536)
T d1mdba_ 163 --F---LPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYP 237 (536)
T ss_dssp --S---EEGGGCCCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHH
T ss_pred --c---cchhhcccCCcCCCccCccchHHhhhcccccccceecccccccccccccccccccccccccccccccccccccc
Confidence 0 00111112222344568899999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHhc-CcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcCCCCCCCCCCceeEEEecCCCccC
Q psy14338 310 LWHSVLTSVLN-GMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPW 388 (1761)
Q Consensus 310 ~~~~i~~~L~~-G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~~~~~~~~l~~Lr~v~~gg~Ge~l 388 (1761)
+...++..++. |.+++..+ .+++..+...+.+++++.+..+|+ .+..+..........++++|.+++| |+++
T Consensus 238 l~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g--G~~~ 310 (536)
T d1mdba_ 238 LSSPGVLGVLYAGGRVVLSP----SPSPDDAFPLIEREKVTITALVPP-LAMVWMDAASSRRDDLSSLQVLQVG--GAKF 310 (536)
T ss_dssp HHSSHHHHHHHTTCEEEECS----SSSHHHHHHHHHHHTCSEEEECHH-HHHHHHHHHHHCCCCCTTCCEEEEE--SSCC
T ss_pred eeeccccccccccccccccC----CCCHHHHHHHHhhhccccccccch-hhhhhhhhccccccccCcceeEEEe--cccc
Confidence 76434444444 55555555 789999999999999999999965 5555555444455678999999999 9999
Q ss_pred CHHHHHHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCC
Q psy14338 389 SLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQ 468 (1761)
Q Consensus 389 ~~~~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 468 (1761)
++...+++.+.+ |.. .+..||.+|++........ .......++|+
T Consensus 311 ~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~g~ 355 (536)
T d1mdba_ 311 SAEAARRVKAVF---GCT---LQQVFGMAEGLVNYTRLDD-----------------------------PEEIIVNTQGK 355 (536)
T ss_dssp CHHHHTTHHHHT---CSE---EEEEEECTTSCEEECCTTS-----------------------------CHHHHHHCCCE
T ss_pred ccccccchhhcc---Cce---eeecccccccccccccccc-----------------------------ccccccCCccc
Confidence 999999999988 432 7888888888755443221 11234678999
Q ss_pred CCC-CcEEEEEeCCCCcccCCCCCceEEEEecCCccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCC
Q psy14338 469 VMP-GCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGG 547 (1761)
Q Consensus 469 p~~-~~~~~I~d~~~~~~~~p~G~~GEL~i~G~~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG 547 (1761)
|++ +..+.|.+++++ +++.|+.|||+|+|+.+++||+++++.+...|. .++||+|||++++++||
T Consensus 356 p~~~~~~~~v~~~~g~--~~~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~------------~~~~~~tGD~~~~~~dG 421 (536)
T d1mdba_ 356 PMSPYDESRVWDDHDR--DVKPGETGHLLTRGPYTIRGYYKAEEHNAASFT------------EDGFYRTGDIVRLTRDG 421 (536)
T ss_dssp ESSTTCEEEEECTTSC--BCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBC------------TTSCEEEEEEEEECTTS
T ss_pred CCCCcceEEEEcCCCC--eecccccceeecCCCcccccccccccccccccc------------ccCccccCccccccCCC
Confidence 986 555666666665 699999999999999999999999999988884 47999999999999999
Q ss_pred eEEEEeccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEec-CCCceEEEEEEeCCC-CCHHHHHHHHHHH-
Q psy14338 548 LVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPD-CSEEESFQWMSRV- 624 (1761)
Q Consensus 548 ~l~~~GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~-~~~~~l~a~v~~~~~-~~~~~l~~~l~~~- 624 (1761)
+|+|+||+||+||++|+||+|.|||+.|.+++.| .+|+|++.++ ..++.++|+|++.++ .+.++++++++++
T Consensus 422 ~l~~~GR~~d~i~~~G~~i~p~~IE~~l~~~p~V-----~~a~vvg~~~~~~g~~~~a~v~~~~~~~~~~~l~~~l~~~~ 496 (536)
T d1mdba_ 422 YIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAV-----HDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERG 496 (536)
T ss_dssp CEEEEEEGGGCEECSSCEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEESSSCCCHHHHHHHHHHTT
T ss_pred ceecCCCcceEEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEEcCCCCeEEEEEEEECCCCCCHHHHHHHHHhcC
Confidence 9999999999999999999999999999998888 7999999985 467889999998764 6788999999986
Q ss_pred HHHhhhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHHHc
Q psy14338 625 LQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRFLE 666 (1761)
Q Consensus 625 Lp~y~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~~~ 666 (1761)
||.||+|+.+ +.+++||+|+||||||++|++.+.+
T Consensus 497 l~~~~~P~~i-------~~v~~lP~t~~GKi~r~~L~~~~~~ 531 (536)
T d1mdba_ 497 LAAYKIPDRV-------EFVESFPQTGVGKVSKKALREAISE 531 (536)
T ss_dssp CCGGGSCSEE-------EECSSCCBCTTSCBCHHHHHHHHHH
T ss_pred CCcCcCccEE-------EEECCCCcCCCcCccHHHHHHHHHH
Confidence 9999999986 5569999999999999999998753
No 11
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=100.00 E-value=9.2e-62 Score=626.50 Aligned_cols=491 Identities=16% Similarity=0.203 Sum_probs=404.7
Q ss_pred cCCCCc-ccccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcC
Q psy14338 1154 TGNTGE-LYARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFP 1232 (1761)
Q Consensus 1154 ~~~~~~-~~~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~ 1232 (1761)
|.+..+ +...|++++|.++++ ++||++|++ ++++++||+||+++++++|+.|++. |+++||+|+|+++
T Consensus 13 ~~~~~~~~~~~tl~~l~~~~a~-----~~Pd~~Al~-----~~~~~~Ty~eL~~~v~~lA~~L~~~-Gv~~gd~Vai~~~ 81 (514)
T d1amua_ 13 NNTKAEYPRDKTIHQLFEEQVS-----KRPNNVAIV-----CENEQLTYHELNVKANQLARIFIEK-GIGKDTLVGIMME 81 (514)
T ss_dssp TCCCCCCCTTCCHHHHHHHHHH-----HCTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECC
T ss_pred cCCCCCCCCCCcHHHHHHHHHH-----hCCCCeEEE-----ECCeeEcHHHHHHHHHHHHHHHHHc-CcCCcCEEEEEeC
Confidence 555554 345788999988886 789999999 6789999999999999999999999 9999999999999
Q ss_pred CCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHhhhccccccccccCCccccCC
Q psy14338 1233 PGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTD 1312 (1761)
Q Consensus 1233 ~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1312 (1761)
|++++++++|||+++|++++|++|.++.+ ++.+++++++++++|++......+...............
T Consensus 82 n~~~~v~~~la~~~~G~v~v~l~~~~~~~------~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~------ 149 (514)
T d1amua_ 82 KSIDLFIGILAVLKAGGAYVPIDIEYPKE------RIQYILDDSQARMLLTQKHLVHLIHNIQFNGQVEIFEED------ 149 (514)
T ss_dssp SSHHHHHHHHHHHHTTCEEEECCTTSCHH------HHHHHHHHHTCSEEEECGGGHHHHTTSCCCSEEEECCCS------
T ss_pred CCHHHHHHHHHHHHhCcEEEEeCCCCCHH------HHHHHHhccCCcEEEEehhhhhhhhhhcccccccccccc------
Confidence 99999999999999999999998877666 999999999999999999887766544322111111000
Q ss_pred CCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHHH
Q psy14338 1313 DMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSS 1392 (1761)
Q Consensus 1313 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 1392 (1761)
............+..++++++|+|||||||.||||+++|+++...+......+++..+++++...+++|..++ ..++..
T Consensus 150 ~~~~~~~~~~~~p~~~~d~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~ 228 (514)
T d1amua_ 150 TIKIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASV-WEMFMA 228 (514)
T ss_dssp TTTTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHH-HHHHHH
T ss_pred cccccccccCCCCCCcccceEEEEccCCCCCcccccccccccccccccccccccccccccccceecccccccc-cccccc
Confidence 0011111122344578899999999999999999999999999999999999999999998888888888776 668888
Q ss_pred hhcCceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHH
Q psy14338 1393 VYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHL 1472 (1761)
Q Consensus 1393 L~~G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l 1472 (1761)
++.|+++++.+... ..+...+++.+..+.++.+..+|...... ...++++++.+++||+++++ .+
T Consensus 229 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~~~~G~~~~~-~~ 293 (514)
T d1amua_ 229 LLTGASLYIILKDT-INDFVKFEQYINQKEITVITLPPTYVVHL-------------DPERILSIQTLITAGSATSP-SL 293 (514)
T ss_dssp HTTTCEEEECCHHH-HTCHHHHHHHHHHTTCCEEEECHHHHTTS-------------CTTTCCSCSEEEEESSCCCH-HH
T ss_pred cccccccccccccc-ccchhhhhhhhhhhhcccccceeeecccc-------------cccccccccEEEEecccCCH-HH
Confidence 99999999887532 46788899999999999999999765432 45678999999999999999 55
Q ss_pred HHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEE
Q psy14338 1473 TSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKV 1552 (1761)
Q Consensus 1473 ~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 1552 (1761)
.+++.+ ...+++.||+||++.++........ .....++.|+++++..+
T Consensus 294 ~~~~~~--------~~~~~~~yG~tE~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~v 341 (514)
T d1amua_ 294 VNKWKE--------KVTYINAYGPTETTICATTWVATKE------------------------TIGHSVPIGAPIQNTQI 341 (514)
T ss_dssp HHHHTT--------TSEEEEEECCGGGSSCSEEEECCSS------------------------CCCSSCCCBEECTTEEE
T ss_pred hhhhcc--------ceeEEEeeccccCceeeeecccccc------------------------ccCcccccccceeeeeE
Confidence 554433 2578999999998765543222111 01123458999999999
Q ss_pred EEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCC
Q psy14338 1553 IIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVP 1632 (1761)
Q Consensus 1553 ~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~ 1632 (1761)
.+.|++ ++++|.|+.|||+|+||.++.||++ +|+.+.+.|..+++. +++|||+|||+|++ |+|
T Consensus 342 ~~~d~~-~~~~~~g~~GEl~v~~~~~~~gY~~---~~~~~~~~~~~~~~~--~~~~~~~TGD~g~~------d~~----- 404 (514)
T d1amua_ 342 YIVDEN-LQLKSVGEAGELCIGGEGLARGYWK---RPELTSQKFVDNPFV--PGEKLYKTGDQARW------LSD----- 404 (514)
T ss_dssp EEECTT-SCBCCTTCEEEEEEEETTCCCEETT---CHHHHHHHEEECSSS--TTSEEEEEEEEEEE------CTT-----
T ss_pred eeeccc-ceecCCCCeeEEEEccCcccccccc---cccccceeeEecccc--CCCceEEECCEEEE------CCC-----
Confidence 999954 8999999999999999999999999 999999999887765 47899999999999 999
Q ss_pred CCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEeeC-----CeEEEEEEeCCCchhHhhHHHHH
Q psy14338 1633 PGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLV 1707 (1761)
Q Consensus 1633 ~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~~-----~~~~a~v~~~~~~~~~~~l~~~l 1707 (1761)
|+ |+|+||+||+||++|++|+|.|||+ +|.+||+|.+|+|++.. +.++|+|+.+. ..+.++|++++
T Consensus 405 ---G~----l~i~GR~~d~i~~~G~~i~p~~IE~-~l~~~~~V~~~~V~~~~~~~~g~~~~a~v~~~~-~~~~~~l~~~~ 475 (514)
T d1amua_ 405 ---GN----IEYLGRIDNQVKIRGHRVELEEVES-ILLKHMYISETAVSVHKDHQEQPYLCAYFVSEK-HIPLEQLRQFS 475 (514)
T ss_dssp ---SC----EEEEEEGGGEEEETTEEEEHHHHHH-HHTTSTTEEEEEEEEEECTTSCEEEEEEEEESS-CCCHHHHHHHH
T ss_pred ---Cc----EEEEecccCEEEECCEEECHHHHHH-HHHhCCCccEEEEEEEECCCCCEEEEEEEEcCC-CCCHHHHHHHH
Confidence 99 9999999999999999999999999 89999999999999853 37888888754 45778999999
Q ss_pred HHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHH
Q psy14338 1708 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745 (1761)
Q Consensus 1708 ~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~ 1745 (1761)
+++ |+ .|++|..|++++ +||+|++|||+|++|++
T Consensus 476 ~~~-l~-~~~~p~~i~~v~--~lP~t~~GKi~R~~L~~ 509 (514)
T d1amua_ 476 SEE-LP-TYMIPSYFIQLD--KMPLTSNGKIDRKQLPE 509 (514)
T ss_dssp HHH-SC-GGGSCSEEEECS--SCCBCTTSSBCGGGSCC
T ss_pred Hhh-CC-cccCceEEEEeC--CCCCCCCcChhHHhcCC
Confidence 987 88 999999999999 99999999999999987
No 12
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=4.1e-61 Score=624.09 Aligned_cols=492 Identities=16% Similarity=0.175 Sum_probs=396.9
Q ss_pred ccccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHH
Q psy14338 1162 ARTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 1241 (1761)
Q Consensus 1162 ~~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~ 1241 (1761)
+.|+++.|.++++ ++||++|++ ++++++||+||+++++++|+.|.+. |+++||+|+|+++|++++++++
T Consensus 24 ~~tl~~~l~~~a~-----~~pd~~Al~-----~~~~~~Ty~el~~~v~~~A~~L~~~-Gv~~gd~V~i~~~n~~~~~v~~ 92 (536)
T d1mdba_ 24 GETFGDLLRDRAA-----KYGDRIAIT-----CGNTHWSYRELDTRADRLAAGFQKL-GIQQKDRVVVQLPNIKEFFEVI 92 (536)
T ss_dssp SCCHHHHHHHHHH-----HHTTSEEEE-----ETTEEEEHHHHHHHHHHHHHHHHHH-TCCTTCEEEECCCSSHHHHHHH
T ss_pred CCCHHHHHHHHHH-----HCCCCeEEE-----ECCEeEcHHHHHHHHHHHHHHHHHc-CcCCcCEEEEEeCCCHHHHHHH
Confidence 3578888888876 779999999 6789999999999999999999999 9999999999999999999999
Q ss_pred HHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHH-----Hhhhc-cc----cccccccCCccccC
Q psy14338 1242 YGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKL-----LKSKE-AS----NVVDIKSWPTILDT 1311 (1761)
Q Consensus 1242 lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~-----~~~~~-~~----~~~~~~~~~~~~~~ 1311 (1761)
|||+++|+++|||+|.++.+ ++.++++++++++++++...... ..... .. ..+...........
T Consensus 93 lA~~~~G~i~vpl~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (536)
T d1mdba_ 93 FALFRLGALPVFALPSHRSS------EITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPL 166 (536)
T ss_dssp HHHHHHTCEEEECCTTCCHH------HHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCTTSEEG
T ss_pred HHHHHhCcEEEecCCCCCHH------HHHHHHHhhccceEeccchhhhhhhhhhhhhhhhccccccceeeeeccccccch
Confidence 99999999999999976666 99999999999999987532110 00000 00 00000000111000
Q ss_pred CCCccchhhhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCcCCCCeEEEEeCCccChhHHHHHHH
Q psy14338 1312 DDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLS 1391 (1761)
Q Consensus 1312 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 1391 (1761)
.+.. ..........++|+++|+|||||||.||||++||+++.+.+......+++.++|+++...+++|.+++...++.
T Consensus 167 ~~~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~~~~~ 244 (536)
T d1mdba_ 167 EDLH--TEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVL 244 (536)
T ss_dssp GGCC--CCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHH
T ss_pred hhcc--cCCcCCCccCccchHHhhhcccccccceecccccccccccccccccccccccccccccccccccccceeecccc
Confidence 1000 01112235678999999999999999999999999999999999999999999999999999998887555555
Q ss_pred Hhhc-CceEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChH
Q psy14338 1392 SVYS-GHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRI 1470 (1761)
Q Consensus 1392 ~L~~-G~~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~ 1470 (1761)
.++. |.+++..+ .+++..++..+++++++.+..+|+.+..+... .......+++++.+++||+++++
T Consensus 245 ~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~gG~~~~~- 312 (536)
T d1mdba_ 245 GVLYAGGRVVLSP----SPSPDDAFPLIEREKVTITALVPPLAMVWMDA-------ASSRRDDLSSLQVLQVGGAKFSA- 312 (536)
T ss_dssp HHHHTTCEEEECS----SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHH-------HHHCCCCCTTCCEEEEESSCCCH-
T ss_pred ccccccccccccC----CCCHHHHHHHHhhhccccccccchhhhhhhhh-------ccccccccCcceeEEEecccccc-
Confidence 5555 45555444 47999999999999999999999999988663 23456678999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCc
Q psy14338 1471 HLTSAFSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGV 1550 (1761)
Q Consensus 1471 ~l~~~~~~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 1550 (1761)
.+.+++.+.++ ......||.+|.+..+..... ......+++|+|+++.
T Consensus 313 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~g~p~~~~ 360 (536)
T d1mdba_ 313 EAARRVKAVFG------CTLQQVFGMAEGLVNYTRLDD--------------------------PEEIIVNTQGKPMSPY 360 (536)
T ss_dssp HHHTTHHHHTC------SEEEEEEECTTSCEEECCTTS--------------------------CHHHHHHCCCEESSTT
T ss_pred ccccchhhccC------ceeeecccccccccccccccc--------------------------ccccccCCcccCCCCc
Confidence 77777777664 456667777765433221111 1112235699998755
Q ss_pred EEEEEcCCCCCCCCCCcceEEEEcCCcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCC
Q psy14338 1551 KVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAP 1630 (1761)
Q Consensus 1551 ~~~v~d~~~~~~~p~G~~GEL~i~g~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~ 1630 (1761)
...+++.+++++++.|+.|||+|+|+.+++||++ +++.+...| ..+|||+|||+|++ ++|
T Consensus 361 ~~~~v~~~~g~~~~~~~~Gel~v~g~~~~~gY~~---~~~~~~~~~--------~~~~~~~tGD~~~~------~~d--- 420 (536)
T d1mdba_ 361 DESRVWDDHDRDVKPGETGHLLTRGPYTIRGYYK---AEEHNAASF--------TEDGFYRTGDIVRL------TRD--- 420 (536)
T ss_dssp CEEEEECTTSCBCCTTCCEEEEEECTTSCSSCTT---CHHHHHHHB--------CTTSCEEEEEEEEE------CTT---
T ss_pred ceEEEEcCCCCeecccccceeecCCCcccccccc---ccccccccc--------cccCccccCccccc------cCC---
Confidence 5555554669999999999999999999999999 999999888 56899999999999 999
Q ss_pred CCCCCCcccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeCCCchhHhhHHH
Q psy14338 1631 VPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVP 1705 (1761)
Q Consensus 1631 ~~~g~G~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~~~~~~~~~l~~ 1705 (1761)
|+ |+|+||+||+||++|+||+|.|||+ +|.+||+|.+|+|++. ++.++|+|+..+...+.++|++
T Consensus 421 -----G~----l~~~GR~~d~i~~~G~~i~p~~IE~-~l~~~p~V~~a~vvg~~~~~~g~~~~a~v~~~~~~~~~~~l~~ 490 (536)
T d1mdba_ 421 -----GY----IVVEGRAKDQINRGGEKVAAEEVEN-HLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKA 490 (536)
T ss_dssp -----SC----EEEEEEGGGCEECSSCEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEESSSCCCHHHHHH
T ss_pred -----Cc----eecCCCcceEEEECCEEECHHHHHH-HHHhCCCccEEEEEEEEcCCCCeEEEEEEEECCCCCCHHHHHH
Confidence 99 9999999999999999999999999 8999999999999974 3478899988777778889999
Q ss_pred HHHHHHhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHHHc
Q psy14338 1706 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 1749 (1761)
Q Consensus 1706 ~l~~~~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~~~ 1749 (1761)
+++++.|| .||+|+.|++++ +||+|+||||||++|++++.+
T Consensus 491 ~l~~~~l~-~~~~P~~i~~v~--~lP~t~~GKi~r~~L~~~~~~ 531 (536)
T d1mdba_ 491 FLRERGLA-AYKIPDRVEFVE--SFPQTGVGKVSKKALREAISE 531 (536)
T ss_dssp HHHHTTCC-GGGSCSEEEECS--SCCBCTTSCBCHHHHHHHHHH
T ss_pred HHHhcCCC-cCcCccEEEEEC--CCCcCCCcCccHHHHHHHHHH
Confidence 99986688 999999999999 999999999999999999853
No 13
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=100.00 E-value=1.1e-58 Score=595.66 Aligned_cols=489 Identities=15% Similarity=0.168 Sum_probs=392.6
Q ss_pred hhHHHHHHHHhhhcCCCcEEEEECCCCceeEEEeHHHHHHHHHHHHHHhhcCCCCccccCCCCCCCEEEEEccCCCchhH
Q psy14338 81 RNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINF 160 (1761)
Q Consensus 81 ~~l~~~~~~~a~~~pd~~Av~~~d~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~~~~~~Gv~~g~~V~l~~~~s~~~~~ 160 (1761)
+||+++|+++|+++||++|+.+.+.+ +++||+||+++++++|++|+ +.|+++||+|+|+++|+ ++|
T Consensus 2 ~ti~~~l~~~a~~~pd~~al~~~~~~----~~~Ty~el~~~~~~~a~~L~--------~~Gv~~gd~V~i~~~n~--~~~ 67 (503)
T d3cw9a1 2 QTVNEMLRRAATRAPDHCALAVPARG----LRLTHAELRARVEAVAARLH--------ADGLRPQQRVAVVAPNS--ADV 67 (503)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEEGGGT----EEEEHHHHHHHHHHHHHHHH--------HTTCCTTCEEEEECCSC--HHH
T ss_pred CCHHHHHHHHHHhCCCCeEEEECCCC----cEEeHHHHHHHHHHHHHHHH--------HcCcCCCCEEEEEeCCC--HHH
Confidence 58999999999999999999986532 68999999999999999999 89999999999999999 999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCcCccchhHHHHHHhcCCCcEEEEcccccccC---cccccccceeccCCCcceeEEecc
Q psy14338 161 LCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGL---PKTAAGEVVAFKGWPKLTWFVTEH 237 (1761)
Q Consensus 161 vva~lAvlkaG~~~vpldp~~p~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1761)
++++|||+++|++++||+|.++++ ++++++++++++++|++....... .......++.+.+. ..+.
T Consensus 68 ~~~~lA~~~~G~v~vpi~~~~~~~-----~i~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~ 136 (503)
T d3cw9a1 68 VIAILALHRLGAVPALLNPRLKSA-----ELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIFLGDL------VRDG 136 (503)
T ss_dssp HHHHHHHHHHTCEEEEECTTSCHH-----HHHHHHHHTTCSEEEESSCHHHHHHHHHTTCCCEEEEHHHH------EETT
T ss_pred HHHHHHHHHhCcEEEEeCCCCCHH-----HHHHHHHhcCCcEEEeecchHHHHHHhhhccccccccchhh------hhhh
Confidence 999999999999999999999976 899999999999999987532110 01111111111100 0010
Q ss_pred ccCCCCCCCCCCCCCCCCcEEEEecCCCCCCceEEEEchHHHHHHHHHHHHHcCC--CCCCeEEEccCCcchhhhHHHHH
Q psy14338 238 LAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHY--TEGENMVCVLDFKRETGLWHSVL 315 (1761)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~~~~i~ 315 (1761)
...............+++++||+|||||||.||||+++|+++...+......+.. ...++++.++|+.|..+.....+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 216 (503)
T d3cw9a1 137 EPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLV 216 (503)
T ss_dssp EECCCSCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEGGGHHHHHHHHHHTSCCCSSTTCEEEECSCTTSHHHHHTTHH
T ss_pred cccccCCccccccchhhhhhhhcccccccccccccccccchhhhhhhhccccccccccccccccccCccccccccccccc
Confidence 0111111223345678999999999999999999999999999999888776654 45589999999999888876677
Q ss_pred HHHhcCcEEEEeCCccccCCHHHHHHHHHhcCceEEEecCHHHHHHhhcC--CCCCCCCCCceeEEEecCCCccCCHHHH
Q psy14338 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT--KDHKDISLSSLRLLLVGDGANPWSLSSC 393 (1761)
Q Consensus 316 ~~L~~G~~lvi~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~~ll~~--~~~~~~~l~~Lr~v~~gg~Ge~l~~~~~ 393 (1761)
.+...|+++++.+ .+++..+...+..++++++..+|. ....++.. .......+++||.+++| |++++++..
T Consensus 217 ~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Lr~i~~g--G~~~~~~~~ 289 (503)
T d3cw9a1 217 AALALDGTYVVVE----EFRPVDALQLVQQEQVTSLFATPT-HLDALAAAAAHAGSSLKLDSLRHVTFA--GATMPDAVL 289 (503)
T ss_dssp HHHHTTCEEEECS----SCCHHHHHHHHHHHTCCEEEECHH-HHHHHHHHHHHTCTTCCCTTCCEEEEC--SSCCCHHHH
T ss_pred ccccccccccccc----ccChHHhhhhhhhceeeccccccc-cccccccccccccccccccceEEEEec--ccccccccc
Confidence 7778888888887 689999999999999999999864 44433222 22334557899999999 999999999
Q ss_pred HHHHHHhhhCCCCCCccccccccccccceEeecCCCCCcccCCCccccccCcccceeeecCCCccCcccccccCCCCCCc
Q psy14338 394 DQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGC 473 (1761)
Q Consensus 394 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~ 473 (1761)
..|...++. .+.+.||.||++..+...... .....+.+.+.+..
T Consensus 290 ~~~~~~~~~------~~~~~yg~~e~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~ 333 (503)
T d3cw9a1 290 ETVHQHLPG------EKVNIYGTTEAMNSLYMRQPK------------------------------TGTEMAPGFFSEVR 333 (503)
T ss_dssp HHHHHHCCS------EEEEEEEETTTEEEEEEESCS------------------------------SSSEEBCCTTCCEE
T ss_pred ccccccccc------cccccccccccceeeeecccc------------------------------ccccccccccccce
Confidence 999988743 399999999998766544321 11123344445455
Q ss_pred EEEEEeCCCCcccCCCCCceEEEEecC-CccccccCCCccccccccccccccCCCccCCCceEeecceEEEeCCCeEEEE
Q psy14338 474 IMTVVKMDSPSYLCKTDEVGEICVAST-GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVC 552 (1761)
Q Consensus 474 ~~~I~d~~~~~~~~p~G~~GEL~i~G~-~l~~GY~~~p~~T~~~f~~~p~~~~g~~~~~~~~yrTGDl~~~~~dG~l~~~ 552 (1761)
...+.+..++ .++.|+.|++++.+. ....||+++++.|+++|. +|||+|||+|++++||.|+|+
T Consensus 334 ~~~~~~~~~~--~~~~g~~g~~~~~~~~~~~~~~~~~~~~t~~~~~-------------~g~~~TgD~g~~~~dG~l~~~ 398 (503)
T d3cw9a1 334 IVRIGGGVDE--IVANGEEGELIVAASDSAFVGYLNQPQATAEKLQ-------------DGWYRTSDVAVWTPEGTVRIL 398 (503)
T ss_dssp EECTTSCTTC--BCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEE-------------TTEEEEEEEEEECTTSCEEEE
T ss_pred eeeeecccCc--ccCCCccccccccccccccccccCChhhhHHHhc-------------CCceecccccccccCCeEEeC
Confidence 5555555554 589999998887755 566789999999999995 789999999999999999999
Q ss_pred eccCCeEEECCcccChHHHHHHHHhcCCccccccceEEEEEEecC-CCceEEEEEEeCCC--CCHHHHHHHHH-HHHHHh
Q psy14338 553 GSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRVL-RDERICVIAEQRPD--CSEEESFQWMS-RVLQAV 628 (1761)
Q Consensus 553 GR~d~qvki~G~rIe~~eIE~~l~~~~~v~~~~~~~a~v~~~~~~-~~~~l~a~v~~~~~--~~~~~l~~~l~-~~Lp~y 628 (1761)
||+||+||++|+||+|.|||+.|.+++.| .+|+|++.+++ .++.++|||+++.+ .+.++++++++ ++||.|
T Consensus 399 GR~~d~ik~~G~~v~~~~IE~~l~~~p~V-----~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~ 473 (503)
T d3cw9a1 399 GRVDDMIISGGENIHPSEIERVLGTAPGV-----TEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELADF 473 (503)
T ss_dssp EESSCCEEETTEEECHHHHHHHHTTSTTE-----EEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHSSSCGG
T ss_pred CCcCCeEEECCEEECHHHHHHHHHhCCCc-----cEEEEEEEECCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999988887 79999999864 56789999998654 67899999995 579999
Q ss_pred hhcceeeeeEEEEeCCCCccCCCCCcccHHHHHHHH
Q psy14338 629 DSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664 (1761)
Q Consensus 629 ~~P~~i~~~~v~~v~~~~lP~t~~GKidR~~L~~~~ 664 (1761)
++|+.| +.+++||+|+||||||++|++++
T Consensus 474 ~~P~~i-------~~v~~~P~t~~GKi~R~~L~~~~ 502 (503)
T d3cw9a1 474 KRPKRY-------FILDQLPKNALNKVLRRQLVQQV 502 (503)
T ss_dssp GSCSEE-------EECSCCCBCTTSCBCHHHHHHHH
T ss_pred CCccEE-------EEECCCCcCCCcCccHHHHHHhc
Confidence 999986 55799999999999999999875
No 14
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=100.00 E-value=2.9e-57 Score=582.40 Aligned_cols=489 Identities=16% Similarity=0.173 Sum_probs=385.5
Q ss_pred cccccccccccCCCCcCCCCCCCceEEccCCCCceeeCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEcCCCHHHHHHHH
Q psy14338 1163 RTGYLGFLRRTSPAGVAGAPVPPGVSSVDTRSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFY 1242 (1761)
Q Consensus 1163 ~~~~~~~~~~~~~~~a~~~P~~~Av~~~d~~~~~~~lTY~eL~~~a~~lA~~L~~~~Gv~~gd~V~i~~~~s~~~iva~l 1242 (1761)
+|+++.|.++++ ++||++|+.+.+ +++++||+||+++++++|++|++. |+++||+|+|+++|++++++++|
T Consensus 2 ~ti~~~l~~~a~-----~~pd~~al~~~~---~~~~~Ty~el~~~~~~~a~~L~~~-Gv~~gd~V~i~~~n~~~~~~~~l 72 (503)
T d3cw9a1 2 QTVNEMLRRAAT-----RAPDHCALAVPA---RGLRLTHAELRARVEAVAARLHAD-GLRPQQRVAVVAPNSADVVIAIL 72 (503)
T ss_dssp CCHHHHHHHHHH-----HSTTSEEEEEGG---GTEEEEHHHHHHHHHHHHHHHHHT-TCCTTCEEEEECCSCHHHHHHHH
T ss_pred CCHHHHHHHHHH-----hCCCCeEEEECC---CCcEEeHHHHHHHHHHHHHHHHHc-CcCCCCEEEEEeCCCHHHHHHHH
Confidence 467778887776 779999998533 357899999999999999999999 99999999999999999999999
Q ss_pred HHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEechhHHHHHh---hhccccccccccCCccccCCCCccchh
Q psy14338 1243 GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLK---SKEASNVVDIKSWPTILDTDDMPKKKL 1319 (1761)
Q Consensus 1243 A~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1319 (1761)
||+++|++++||+|.+|.+ ++++++++++++++|++........ .......+... +............
T Consensus 73 A~~~~G~v~vpi~~~~~~~------~i~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~ 143 (503)
T d3cw9a1 73 ALHRLGAVPALLNPRLKSA------ELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIFLG---DLVRDGEPYSYGP 143 (503)
T ss_dssp HHHHHTCEEEEECTTSCHH------HHHHHHHHTTCSEEEESSCHHHHHHHHHTTCCCEEEEHH---HHEETTEECCCSC
T ss_pred HHHHhCcEEEEeCCCCCHH------HHHHHHHhcCCcEEEeecchHHHHHHhhhccccccccch---hhhhhhcccccCC
Confidence 9999999999999977766 9999999999999998865432211 11111111111 0000000000011
Q ss_pred hhccCCCCCCCEEEEEeccCCCCCCceEEccHHHHHHHHHHHHHHcCc--CCCCeEEEEeCCccChhHHHHHHHHhhcCc
Q psy14338 1320 AALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL--YPSRHIALCLDPYCGLGFALWVLSSVYSGH 1397 (1761)
Q Consensus 1320 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~L~~G~ 1397 (1761)
.......++++++||+|||||||.||+|+++|+++...+......+.. ...+..+..++++|..+.....+.+...++
T Consensus 144 ~~~~~~~~~~~~a~i~~TSGTTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 223 (503)
T d3cw9a1 144 PIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDG 223 (503)
T ss_dssp CCCCCCCCTTSEEEEEEECCSSSSCEEEEEEGGGHHHHHHHHHHTSCCCSSTTCEEEECSCTTSHHHHHTTHHHHHHTTC
T ss_pred ccccccchhhhhhhhcccccccccccccccccchhhhhhhhccccccccccccccccccCcccccccccccccccccccc
Confidence 112245678999999999999999999999999999999888876654 444677778887777777666777888888
Q ss_pred eEEEeCCCccccCHHHHHHHHHhcCceEeecchHHHHHHHhhhcCCcchhhccCCCCCcceEEEeecCCCChHHHHHHHH
Q psy14338 1398 HSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFS 1477 (1761)
Q Consensus 1398 ~~vl~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~~~~~~l~~Lr~v~~gGe~l~~~~l~~~~~ 1477 (1761)
++++.++ +++..+...+.+++++++..+|+.+..+..... .......+++||.+++||+++++ .+..++.
T Consensus 224 ~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Lr~i~~gG~~~~~-~~~~~~~ 293 (503)
T d3cw9a1 224 TYVVVEE----FRPVDALQLVQQEQVTSLFATPTHLDALAAAAA-----HAGSSLKLDSLRHVTFAGATMPD-AVLETVH 293 (503)
T ss_dssp EEEECSS----CCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHH-----HTCTTCCCTTCCEEEECSSCCCH-HHHHHHH
T ss_pred ccccccc----cChHHhhhhhhhceeeccccccccccccccccc-----cccccccccceEEEEeccccccc-ccccccc
Confidence 8888774 799999999999999999999999988866421 22345667899999999999999 7777777
Q ss_pred HHHhhCCCCCccccccccccccceeeecCCCCCCCceeEecccccccCcceecccCCCCccceeccccccCCcEEEEEcC
Q psy14338 1478 KLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP 1557 (1761)
Q Consensus 1478 ~~~~~~g~~e~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~ 1557 (1761)
..++ ..+.+.||.+|++..+........ ...+.+.+.+.....+.+
T Consensus 294 ~~~~------~~~~~~yg~~e~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~- 339 (503)
T d3cw9a1 294 QHLP------GEKVNIYGTTEAMNSLYMRQPKTG---------------------------TEMAPGFFSEVRIVRIGG- 339 (503)
T ss_dssp HHCC------SEEEEEEEETTTEEEEEEESCSSS---------------------------SEEBCCTTCCEEEECTTS-
T ss_pred cccc------ccccccccccccceeeeecccccc---------------------------ccccccccccceeeeeec-
Confidence 6654 468899999998765443222110 012234444444444444
Q ss_pred CCCCCCCCCcceEEEEcC-CcccccccCCCCChhhhHHHhhhhcccCCCCCceEeeCceeEEeccCCCCCCCCCCCCCCC
Q psy14338 1558 ETKGQCGDSHLGEIWVQS-PHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVS 1636 (1761)
Q Consensus 1558 ~~~~~~p~G~~GEL~i~g-~~v~~GY~~~~~~p~~t~~~F~~~p~~~~~~~~~yrTGDlg~~~~~~~~d~d~~~~~~g~G 1636 (1761)
+.++.++.|+.|++++.+ +....||++ +++.|.+.| .+|||+|||+|++ |+| |
T Consensus 340 ~~~~~~~~g~~g~~~~~~~~~~~~~~~~---~~~~t~~~~---------~~g~~~TgD~g~~------~~d--------G 393 (503)
T d3cw9a1 340 GVDEIVANGEEGELIVAASDSAFVGYLN---QPQATAEKL---------QDGWYRTSDVAVW------TPE--------G 393 (503)
T ss_dssp CTTCBCCTTCCEEEEEECCTTSCCCBTT---CHHHHHHHE---------ETTEEEEEEEEEE------CTT--------S
T ss_pred ccCcccCCCccccccccccccccccccC---ChhhhHHHh---------cCCceeccccccc------ccC--------C
Confidence 558899999999887765 466678888 999999998 4689999999999 999 9
Q ss_pred cccceEEEEcccCCeEEeCCeecChHHHHHHHHHhccCcceeEEEee-----CCeEEEEEEeC-CCchhHhhHHHHHHHH
Q psy14338 1637 KLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELD-GNESEALDLVPLVTNA 1710 (1761)
Q Consensus 1637 ~~~~~l~~~GR~dd~Iki~G~rI~~~eIE~~~l~~~p~V~~a~Vv~~-----~~~~~a~v~~~-~~~~~~~~l~~~l~~~ 1710 (1761)
+ |+++||+||+||++|+||+|.|||+ ++.+||+|.+|+|++. ++.+++||+.+ +...+.+++++++++.
T Consensus 394 ~----l~~~GR~~d~ik~~G~~v~~~~IE~-~l~~~p~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~ 468 (503)
T d3cw9a1 394 T----VRILGRVDDMIISGGENIHPSEIER-VLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSS 468 (503)
T ss_dssp C----EEEEEESSCCEEETTEEECHHHHHH-HHTTSTTEEEEEEEEEEETTTEEEEEEEEEECTTCCCCHHHHHHHHHHS
T ss_pred e----EEeCCCcCCeEEECCEEECHHHHHH-HHHhCCCccEEEEEEEECCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhc
Confidence 9 9999999999999999999999999 8999999999999974 34788888874 4566778999999765
Q ss_pred HhhhcCceeeEEEEECCCCccCCCchhhhHHHHHHHH
Q psy14338 1711 VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGF 1747 (1761)
Q Consensus 1711 ~Lp~~~~vP~~i~~v~~~~lP~t~~GKvdR~~L~~~~ 1747 (1761)
.|| .|++|+.|++++ +||+|++|||||++|++++
T Consensus 469 ~l~-~~~~P~~i~~v~--~~P~t~~GKi~R~~L~~~~ 502 (503)
T d3cw9a1 469 ELA-DFKRPKRYFILD--QLPKNALNKVLRRQLVQQV 502 (503)
T ss_dssp SSC-GGGSCSEEEECS--CCCBCTTSCBCHHHHHHHH
T ss_pred CCC-CCCCccEEEEEC--CCCcCCCcCccHHHHHHhc
Confidence 588 999999999999 9999999999999999976
No 15
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}
Probab=25.16 E-value=68 Score=30.41 Aligned_cols=56 Identities=9% Similarity=-0.043 Sum_probs=41.6
Q ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEec
Q psy14338 1220 KINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSN 1284 (1761)
Q Consensus 1220 Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~ 1284 (1761)
++++||.|.|..--..-..+++++....+..++-+|+. + +...+.++.++..+|..
T Consensus 25 ~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~---~------~rl~~a~~~GAd~~in~ 80 (175)
T d1cdoa2 25 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN---P------DKFEKAKVFGATDFVNP 80 (175)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC---G------GGHHHHHHTTCCEEECG
T ss_pred CCCCCCEEEEEecCCccchHHHHHHHHhhchheeecch---H------HHHHHHHHcCCcEEEcC
Confidence 79999999999988878877777776666667767553 2 34456677888888754
No 16
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.19 E-value=1.2e+02 Score=28.30 Aligned_cols=62 Identities=16% Similarity=0.037 Sum_probs=42.7
Q ss_pred HHHHhhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEeCCCCCCCCccCChHHHHHHHHhcCCeEEEech
Q psy14338 1213 ALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGA-VPVTIRPPHPQNLQTTLPTVRMIVDVSKSVLVLSNQ 1285 (1761)
Q Consensus 1213 ~~L~~~~Gv~~gd~V~i~~~~s~~~iva~lA~l~aG~-~~vpldp~~P~~~~~~~~rl~~il~~~~~~~vl~~~ 1285 (1761)
+.+.+. ++++||.|.|+.--..-..+++++. ..|+ .++-+|++ . ....+.++.++..++...
T Consensus 17 ~a~~~~-~~~~gd~VlI~G~G~iG~~~~~~a~-~~G~~~Vi~~d~~--------~-~rl~~a~~~Ga~~~~~~~ 79 (171)
T d1pl8a2 17 HACRRG-GVTLGHKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDLS--------A-TRLSKAKEIGADLVLQIS 79 (171)
T ss_dssp HHHHHH-TCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEESC--------H-HHHHHHHHTTCSEEEECS
T ss_pred HHHHHh-CCCCCCEEEEECCCccHHHHHHHHH-HcCCceEEeccCC--------H-HHHHHHHHhCCccccccc
Confidence 344555 8999999999988677777776665 4677 46666542 2 444466788888777654
No 17
>d2ayia1 e.60.1.1 (A:3-408) Aminopeptidase T {Thermus thermophilus [TaxId: 274]}
Probab=20.75 E-value=68 Score=35.40 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhc-CCCCCCEEEEEcC-CCHHHHHHHH-HHHHcCCEEEeCCCCCCCCccCChHHHHHHH
Q psy14338 1204 LHKRAERVGALLLERA-KINTGDHVALIFP-PGIDLICAFY-GCLYVGAVPVTIRPPHPQNLQTTLPTVRMIV 1273 (1761)
Q Consensus 1204 L~~~a~~lA~~L~~~~-Gv~~gd~V~i~~~-~s~~~iva~l-A~l~aG~~~vpldp~~P~~~~~~~~rl~~il 1273 (1761)
+.++.+++|..|.+.+ +|++|+.|.|..+ .+.+++.++. ++.++||-+|.+ .+..+++....
T Consensus 2 ~~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~Lvral~e~A~~~GA~pv~v--------~~~d~~i~r~~ 66 (406)
T d2ayia1 2 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTV--------IYGDQELARKR 66 (406)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEE--------EECCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcccCCCCCEEEEEcccchHHHHHHHHHHHHHcCCCeEEE--------eecChHHHHHH
No 18
>d2cfxa2 d.58.4.2 (A:64-140) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=20.04 E-value=1.5e+02 Score=23.64 Aligned_cols=59 Identities=5% Similarity=0.043 Sum_probs=37.3
Q ss_pred ChHHHHHHHHHhccCcceeEEEeeCCeEEEEEEeCCCchhHhhHHHHHHHHHhhhcCceeeEEEEEC
Q psy14338 1660 HPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVD 1726 (1761)
Q Consensus 1660 ~~~eIE~~~l~~~p~V~~a~Vv~~~~~~~a~v~~~~~~~~~~~l~~~l~~~~Lp~~~~vP~~i~~v~ 1726 (1761)
...++++ .+..+|+|.+|.-+....-..+-+... +.+++.+++.+ |+ .+.--..-++++
T Consensus 14 ~~~~~~~-~i~~~peV~e~~~vtG~~D~il~v~~~----d~~~l~~~i~~--l~-~v~~t~T~iVl~ 72 (77)
T d2cfxa2 14 DYERFKS-YIQTLPNIEFCYRIAGAACYMLKINAE----SLEAVEDFINK--TS-PYAQTVTHVIFS 72 (77)
T ss_dssp CHHHHHH-HHHTCTTEEEEEEEESSSSEEEEEEES----SHHHHHHHHHH--HT-TTEEEEEEEEEE
T ss_pred CHHHHHH-HHhcCchheEEEEEcCCCCEEEEEEEC----CHHHHHHHHhh--CC-CcccEEEEEEEE
Confidence 3678999 899999999998885443333333333 34577777753 66 554444444444
Done!