RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14338
(1761 letters)
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica
[TaxId: 28901]}
Length = 643
Score = 136 bits (343), Expect = 2e-33
Identities = 90/595 (15%), Positives = 176/595 (29%), Gaps = 104/595 (17%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
++ +LH+ R LL+ I GD VA+ P + A C +GAV I
Sbjct: 104 ISYRELHRDVCRFANTLLDLG-IKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGF 162
Query: 1259 PQN-------------------LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNV 1299
++ + +V ++ + +V ++ K +
Sbjct: 163 SPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSD 222
Query: 1300 VDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAA-VTSLC 1358
+D + + D + K A AE ++ ++ +TG G+ + +
Sbjct: 223 IDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAA 282
Query: 1359 RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAV 1418
+ K + +P D G + + + G +++ PA V
Sbjct: 283 TTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVV 342
Query: 1419 SQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSK 1478
+++V + + + +R V E A+
Sbjct: 343 DKHQVNILYTAPTAIRALMA-----EGDKAIEGTDRSSLRILGSVGEPINP----EAWEW 393
Query: 1479 LFSALGLSPRAVSTSFG---CRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSP 1535
+ +G V ++ + L GA +
Sbjct: 394 YWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSA-------------------- 433
Query: 1536 HSLCLLESGKLLPGVKVIIANPETKGQCGDSHLGEIWVQS--PHNASGYFSLYGDESEYA 1593
+ GV+ + + E + G + + P A +GD +
Sbjct: 434 --------TRPFFGVQPALVDNEGH-PQEGATEGNLVITDSWPGQARTL---FGDHERFE 481
Query: 1594 QQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIM 1653
Q + + T + +G ++ G +D+ +
Sbjct: 482 QTYFS------TFKNMYFSGDGARRDE------------------DGYYWITGRVDDVLN 517
Query: 1654 LRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGNESEALDLVPLVT 1708
+ G R +IE+ + AH KIAE AV + V L+ E + +L V
Sbjct: 518 VSGHRLGTAEIES-ALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVR 576
Query: 1709 NAVLEE--HHLIVGVAVVVDPGVVPINSRGEKQRMHLRD---GFLADQLDPIYVA 1758
N V +E V D +P G+ R LR G ++ D +A
Sbjct: 577 NWVRKEIGPLATPDVLHWTDS--LPKTRSGKIMRRILRKIAAGDTSNLGDTSTLA 629
Score = 122 bits (307), Expect = 7e-29
Identities = 94/598 (15%), Positives = 174/598 (29%), Gaps = 92/598 (15%)
Query: 84 EAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLK 143
+ R+ + S ++Y +L + A TLL + +K
Sbjct: 75 ANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLL--------DLGIK 126
Query: 144 SGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTR-------RDAGSQQI----G 192
GD +A+ P A C G V I + D+ S+ +
Sbjct: 127 KGDVVAIYMPMV--PEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADE 184
Query: 193 FLLGSCDIQVALTSDACLKGLPKTAAGEVVAFK------GWPKLTWFVTEHLAKTPKDWA 246
+ I + D LK T+ V+ K W + L +
Sbjct: 185 GVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEH 244
Query: 247 PQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHC-RALTQACHYTEGENMVCVLDFK 305
+ + P +I YT+ G GV T L + Y G+ C D
Sbjct: 245 QPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVG 304
Query: 306 RETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLAT 365
TG + + + G + PA Q++ K++ ++ L+A
Sbjct: 305 WVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPT-AIRALMAE 363
Query: 366 KDH--KDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSEC-LTV 422
D + SSLR+L P + + + + + + +E +
Sbjct: 364 GDKAIEGTDRSSLRILGS--VGEPINPEAWEWYWKKIGKEKCP---VVDTWWQTETGGFM 418
Query: 423 SVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDS 482
PG + A + G +V D+
Sbjct: 419 ITPLPGAIELKAGS-----------------------------ATRPFFGVQPALV--DN 447
Query: 483 PSYLCKTDEVGEICVAST--GTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLL 540
+ + G + + + G +G T+ T SG
Sbjct: 448 EGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTF----------KNMYFSGDG 497
Query: 541 GFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIR-VLRD 599
G ++ G D ++ V+G + +I + ++A + AV I ++
Sbjct: 498 ARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIA-----EAAVVGIPHAIKG 552
Query: 600 ERIC--VIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGI 655
+ I V + S E + + V + + + L + LPKT G I
Sbjct: 553 QAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPD----VLHWTDSLPKTRSGKI 606
Score = 58.9 bits (142), Expect = 4e-09
Identities = 29/191 (15%), Positives = 54/191 (28%), Gaps = 14/191 (7%)
Query: 779 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 838
L + S ++ ++ +LH+ R LL+ I GD VA+
Sbjct: 76 NCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLG-IKKGDVVAIY 134
Query: 839 FPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTSEHVIFT 898
P + A C +GAV I E + +S ++ T
Sbjct: 135 MPMVPEAAVAMLACARIGAVHSVIFGGFS-------------PEAVAGCIIDSSSRLVIT 181
Query: 899 LLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLCC 958
+ + + + +E + + + G DL
Sbjct: 182 ADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKAS 241
Query: 959 PSNHPTPSPSE 969
P + P +E
Sbjct: 242 PEHQPEAMNAE 252
Score = 49.3 bits (117), Expect = 3e-06
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 13/126 (10%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
++ G +D+ + + G R +IE+ + AH KIAE AV + V L+
Sbjct: 506 YWITGRVDDVLNVSGHRLGTAEIES-ALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHG 564
Query: 1063 ESEALDLVPLVTNAVLEE--HHLIVGVAVVVDPGVVPINSRGEKQRMHLRD---GFLADQ 1117
E + +L V N V +E V D +P G+ R LR G ++
Sbjct: 565 EEPSPELYAEVRNWVRKEIGPLATPDVLHWTDS--LPKTRSGKIMRRILRKIAAGDTSNL 622
Query: 1118 LDPIYI 1123
D +
Sbjct: 623 GDTSTL 628
Score = 45.4 bits (107), Expect = 7e-05
Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 2/128 (1%)
Query: 882 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 941
L + S ++ ++ +LH+ R LL+ I GD VA+
Sbjct: 76 NCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLG-IKKGDVVAIY 134
Query: 942 FPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSG-RQQICSSLIQPKCDQTSQ 1000
P + A C + H S DS R I +
Sbjct: 135 MPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPL 194
Query: 1001 VEKLHDAV 1008
+ + DA+
Sbjct: 195 KKNVDDAL 202
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 640
Score = 128 bits (321), Expect = 1e-30
Identities = 78/586 (13%), Positives = 169/586 (28%), Gaps = 105/586 (17%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+T +L + +V +L + GD VA+ P + I +GA+ +
Sbjct: 91 ITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGF 150
Query: 1259 PQN----------------------LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEA 1296
N + T R++ D + + + V + +
Sbjct: 151 SSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSV 210
Query: 1297 SNVVDIKSWPTILDTDDMPKKKLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSH-AAVT 1355
+ + K K +E +L ++ +TG G++ S +
Sbjct: 211 AFHAPRDLDW----ATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLL 266
Query: 1356 SLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWL 1415
+M+ + + D G V + G +++ + N + +
Sbjct: 267 GALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYW 326
Query: 1416 SAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSA 1475
+ +++V + + + L + N +L +R V E
Sbjct: 327 DIIDEHKVTQFYVAPTALRLLKR-----AGDSYIENHSLKSLRCLGSVGEPIAA----EV 377
Query: 1476 FSKLFSALGLSPRAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSP 1535
+ +G + + ++ E V A + P
Sbjct: 378 WEWYSEKIGKNEIPIVDTYWQ-------------TESGSHLVTPLAGGVTPMKPGSASFP 424
Query: 1536 HSLCLLESGKLLPGVKVIIANPETKGQCGDSH-LGEIWVQSPHNASGYFSLY-GDESEYA 1593
G+ ++ +P T + SH G + V++ + + Y
Sbjct: 425 -----------FFGIDAVVLDPNTGEELNTSHAEGVLAVKAA--WPSFARTIWKNHDRYL 471
Query: 1594 QQFSARLVTGNTGELYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIM 1653
+ N Y TG + ++++G +D+ +
Sbjct: 472 DTYL------NPYPGYYFTGDGAAKDK------------------DGYIWILGRVDDVVN 507
Query: 1654 LRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN-------ESEAL 1701
+ G R +IE + +AECAV + V L + E
Sbjct: 508 VSGHRLSTAEIEA-AIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKNKSSWSTATDDELQ 566
Query: 1702 DLVPLVTNAVLEE--HHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1745
D+ + V ++ + ++VD +P G+ R LR
Sbjct: 567 DIKKHLVFTVRKDIGPFAAPKLIILVDD--LPKTRSGKIMRRILRK 610
Score = 107 bits (267), Expect = 4e-24
Identities = 86/600 (14%), Positives = 166/600 (27%), Gaps = 86/600 (14%)
Query: 84 EAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTSESSLK 143
+ R+ T ++TY +LL +VA L ++
Sbjct: 62 YNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYS-------MGVR 114
Query: 144 SGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTR-------RDAGSQ----QIG 192
GD +A+ P + G + + + D S+
Sbjct: 115 KGDTVAVYMPMV--PEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDE 172
Query: 193 FLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEH-----LAKTPKDWAP 247
G I+ D L+ P V P + + K K + P
Sbjct: 173 SNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDLDWATEKKKYKTYYP 232
Query: 248 QPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQ-ACHYTEGENMVCVLDFKR 306
+ + P ++ YT+ G+ GV + A L + + + D
Sbjct: 233 CTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGW 292
Query: 307 ETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA-VVKSRDLHWGLLAT 365
TG + V +L G + N + + +I +++ + V +
Sbjct: 293 ITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGD 352
Query: 366 KDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVR 425
++ SL SLR L P + + + G I +E +
Sbjct: 353 SYIENHSLKSLRCLGS--VGEPIAAEVWEWYSEKI---GKNEIPIVDTYWQTES-GSHLV 406
Query: 426 RPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSY 485
P GV G G V+ ++
Sbjct: 407 TPLAGGVTPMKPG--------------------------SASFPFFGIDAVVLDPNTGEE 440
Query: 486 LCKTDEVGEICVASTGTG--SQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFL 543
L + G + V + W T+ Y +G
Sbjct: 441 LNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNP----------YPGYYFTGDGAAK 490
Query: 544 GPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERI 602
G +++ G D ++ V+G + + +I A ++ + AV L + +
Sbjct: 491 DKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIVA-----ECAVVGFNDDLTGQAV 545
Query: 603 CVIAEQRPDCS-----EEESFQWMSRVLQAVDSIHQVGLYCL--ALVPPNYLPKTPLGGI 655
+ S ++E ++ V +G + ++ + LPKT G I
Sbjct: 546 AAFVVLKNKSSWSTATDDELQDIKKHLVFTVRK--DIGPFAAPKLIILVDDLPKTRSGKI 603
Score = 57.9 bits (139), Expect = 9e-09
Identities = 15/91 (16%), Positives = 28/91 (30%)
Query: 779 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 838
+ A T + +T +L + +V +L + GD VA+
Sbjct: 63 NCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVY 122
Query: 839 FPPGIDLICAFYGCLYVGAVPVTIRPPHPQN 869
P + I +GA+ + N
Sbjct: 123 MPMVPEAIITLLAISRIGAIHSVVFAGFSSN 153
Score = 52.9 bits (126), Expect = 3e-07
Identities = 20/126 (15%), Positives = 41/126 (32%)
Query: 882 EILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALI 941
+ A T + +T +L + +V +L + GD VA+
Sbjct: 63 NCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVY 122
Query: 942 FPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTSQV 1001
P + I + H SSN R ND + + ++ + + +
Sbjct: 123 MPMVPEAIITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIET 182
Query: 1002 EKLHDA 1007
+++ D
Sbjct: 183 KRIVDD 188
Score = 44.5 bits (104), Expect = 1e-04
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 17/118 (14%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
++++G +D+ + + G R +IE + +AECAV + V L
Sbjct: 496 IWILGRVDDVVNVSGHRLSTAEIEA-AIIEDPIVAECAVVGFNDDLTGQAVAAFVVLKNK 554
Query: 1063 -------ESEALDLVPLVTNAVLEE--HHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1111
+ E D+ + V ++ + ++VD +P G+ R LR
Sbjct: 555 SSWSTATDDELQDIKKHLVFTVRKDIGPFAAPKLIILVDD--LPKTRSGKIMRRILRK 610
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168
{Thermus thermophilus [TaxId: 274]}
Length = 534
Score = 123 bits (308), Expect = 2e-29
Identities = 102/555 (18%), Positives = 183/555 (32%), Gaps = 78/555 (14%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
T +++++RA R+ L + GD VA + + A++ +GAV T P
Sbjct: 41 TTYAEVYQRARRLMGGLRAL-GVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRL 99
Query: 1259 PQN-LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKK 1317
+ L V + L+ + + LK+ + V+D K+ L ++ +
Sbjct: 100 SPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGE 159
Query: 1318 KLAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAA-VTSLCRSMKLACELYPSRHIALC 1376
+ + A + ++ TTG+ G+ SH A V + + + + L
Sbjct: 160 EADPVRVPERA--ACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLP 217
Query: 1377 LDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELC 1436
+ P + ++ G +L P ++PA + V T V
Sbjct: 218 VVPMFHVNAWCLPYAATLVGAKQVLPGP---RLDPASLVELFDGEGVTFTAGVPTVWLAL 274
Query: 1437 TKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGC 1496
L++ L +R VV PR L + F + G
Sbjct: 275 AD-------YLESTGHRLKTLRRLVVGGSAAPR-SLIARFER---------------MGV 311
Query: 1497 RVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIAN 1556
V L S ++ L + +G +P V++ +A+
Sbjct: 312 EVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAK--------TGLPIPLVRLRVAD 363
Query: 1557 PETKGQCGDSH-LGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYL 1615
E + D LGE+ ++ P GY YG+E T + + RTG +
Sbjct: 364 EEGRPVPKDGKALGEVQLKGPWITGGY---YGNEEATRSAL--------TPDGFFRTGDI 412
Query: 1616 GFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKI 1675
G V + L + I G +D+EN + H K+
Sbjct: 413 AVWD---EEGY---------------VEIKDRLKDLIKSGGEWISSVDLEN-ALMGHPKV 453
Query: 1676 AECAVF-----TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVV 1730
E AV W + VV G + +L + A + L V + +
Sbjct: 454 KEAAVVAIPHPKWQERPLAVVVPRGEKPTPEELNEHLLKAGFAKWQLPDAY-VFAEE--I 510
Query: 1731 PINSRGEKQRMHLRD 1745
P S G+ + LR+
Sbjct: 511 PRTSAGKFLKRALRE 525
Score = 113 bits (282), Expect = 3e-26
Identities = 92/590 (15%), Positives = 181/590 (30%), Gaps = 79/590 (13%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L LE A +G G+ TY ++ R+ ++ L
Sbjct: 13 LWDFLERAAALFGRKE-----VVSRLHTGE-VHRTTYAEVYQRARRLMGGLR-------- 58
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ GDR+A + N+ L A++ G V L+ ++I ++L
Sbjct: 59 ALGVGVGDRVATLGFNH--FRHLEAYFAVPGMGAVLHTANPRLS-----PKEIAYILNHA 111
Query: 199 DIQVALTSDACLKGLPKTAAG--EVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTP 256
+ +V L L + V F + + + A R+ +
Sbjct: 112 EDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGEEADPVRVPERAA 171
Query: 257 AYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCV-LDFKRETGLWHSVL 315
+ YTT G GV + A++ H A + E V + + W
Sbjct: 172 CGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPY 231
Query: 316 TSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSS 375
+ L G V +++PAS +++ + + L + L +
Sbjct: 232 AATLVGAKQVLPGP---RLDPASLVELFDGEGVTFTAGVPT-VWLALADYLESTGHRLKT 287
Query: 376 LRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNAT 435
LR L+VG A P SL ++ F+ G+ +S + + + ++
Sbjct: 288 LRRLVVGGSAAPRSL------IARFERMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEE 341
Query: 436 GRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVGEI 495
+ L G +P + V + +GE+
Sbjct: 342 EKLTLKAK----------------------TGLPIPLVRLRVADEEGRPVPKDGKALGEV 379
Query: 496 CVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCGSR 555
+ Y+G + + D + R+G + G V +
Sbjct: 380 QLKGPWITGGYYGNEEATRSALT------------PDGFFRTGDIAVWDEEGYVEIKDRL 427
Query: 556 DGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDCSE 614
L+ G ++ D+ ++ +K AV +I ER + R +
Sbjct: 428 KDLIKSGGEWISSVDLENALMGHPKVK-----EAAVVAIPHPKWQERPLAVVVPRGEKPT 482
Query: 615 EESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHLSECKRRF 664
E + +L+A + Q+ V +P+T G + ++
Sbjct: 483 PE--ELNEHLLKAGFAKWQLPDA---YVFAEEIPRTSAGKFLKRALREQY 527
Score = 62.2 bits (150), Expect = 4e-10
Identities = 55/425 (12%), Positives = 112/425 (26%), Gaps = 36/425 (8%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 836
+ + L+ AA + + L+ T +++++RA R+ L + GD VA
Sbjct: 13 LWDFLERAAALFGRKEVVSRLH--TGEVHRTTYAEVYQRARRLMGGLRAL-GVGVGDRVA 69
Query: 837 LIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQN-LQTTLPTHQFISEILKWRAASTSEHV 895
+ + A++ +GAV T P + L + + E +
Sbjct: 70 TLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAI 129
Query: 896 IFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGC 955
L + + + E + ++ + + G + G
Sbjct: 130 RGELKTVQHFVVMDEKAPEGYLAYEEALGEEADPVRVPERAACGMAYTTGTTGLPK--GV 187
Query: 956 LCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQ-PKCDQTSQVEKLHDAVFVVGAL 1014
+ S + S T + C + V L
Sbjct: 188 VYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGPRL 247
Query: 1015 DETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLV---- 1070
D ++ + V +A+ T L + + G + L+
Sbjct: 248 DPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARFE 307
Query: 1071 ---PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQ------------RMHLRDGFLA 1115
V V V V + ++ + R+ + D
Sbjct: 308 RMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVADEEGR 367
Query: 1116 DQLDPI----YIWVQSPHNASGYFSLYGDESEYAQQFSAR--LVTGNTGELYARTGYLGF 1169
+ ++ P GY YG+E + TG+ GY+
Sbjct: 368 PVPKDGKALGEVQLKGPWITGGY---YGNEEATRSALTPDGFFRTGDIAVWDEE-GYVEI 423
Query: 1170 LRRTS 1174
R
Sbjct: 424 KDRLK 428
Score = 49.9 bits (118), Expect = 2e-06
Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
V + L + I G +D+EN + H K+ E AV W + VV G
Sbjct: 421 VEIKDRLKDLIKSGGEWISSVDLEN-ALMGHPKVKEAAVVAIPHPKWQERPLAVVVPRGE 479
Query: 1063 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1111
+ +L + A + L V + +P S G+ + LR+
Sbjct: 480 KPTPEELNEHLLKAGFAKWQLPDAY-VFAEE--IPRTSAGKFLKRALRE 525
Score = 47.2 bits (111), Expect = 1e-05
Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 3/116 (2%)
Query: 872 TTLPTHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAK 931
T + + + L+ AA + + L+ T +++++RA R+ L
Sbjct: 5 TMMDEELNLWDFLERAAALFGRKEVVSRLH--TGEVHRTTYAEVYQRARRLMGGLRAL-G 61
Query: 932 INTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQIC 987
+ GD VA + + A++ + T +P S + N + + +
Sbjct: 62 VGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLL 117
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId:
7054]}
Length = 541
Score = 120 bits (302), Expect = 1e-28
Identities = 74/567 (13%), Positives = 167/567 (29%), Gaps = 94/567 (16%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+T ++ + + R+ + +NT + + + G L++G +
Sbjct: 48 ITYAEYFEMSVRLAEAMKRY-GLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIY 106
Query: 1259 PQN-----LQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDD 1313
+ + + PTV + ++ + + + K + D + + ++
Sbjct: 107 NERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVT 166
Query: 1314 MPKKKLAALY-----RAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCR-SMKLACEL 1367
Y + +A + S +TG+ G+ + H +
Sbjct: 167 SHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGN 226
Query: 1368 YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTF 1427
A+ GF ++ +++ L+L ++ Y+++
Sbjct: 227 QIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY---RFEEELFLRSLQDYKIQSAL 283
Query: 1428 CSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSP 1487
+ K + S ++ S
Sbjct: 284 LVPTLFSFFAK--------------------------STLIDKYDLSNLHEIASGGAPLS 317
Query: 1488 RAVSTSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLL 1547
+ V + R ++ QG E + + + ++ GK++
Sbjct: 318 KEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAV--------------GKVV 363
Query: 1548 PGVKVIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGE 1607
P + + + +T G + GE+ V+ P SGY + +
Sbjct: 364 PFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGY---VNNPEATNALI--------DKD 412
Query: 1608 LYARTGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENS 1667
+ +G + + + F+V L I +G + P ++E+
Sbjct: 413 GWLHSGDIAYWDE------------------DEHFFIVDRLKSLIKYKGYQVAPAELES- 453
Query: 1668 VMRAHKKIAECAVF-----TWTNLLVVVVEL-DGNESEALDLVPLVTNAVLEEHHLIVGV 1721
++ H I + V L VV L G ++V V + V L GV
Sbjct: 454 ILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGV 513
Query: 1722 AVVVDPGVVPINSRGEKQRMHLRDGFL 1748
V VD VP G+ +R+ +
Sbjct: 514 -VFVDE--VPKGLTGKLDARKIREILI 537
Score = 112 bits (280), Expect = 5e-26
Identities = 82/610 (13%), Positives = 174/610 (28%), Gaps = 87/610 (14%)
Query: 67 PAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVA 126
PAP L L A++RY +A D + + + +TY + S+++A
Sbjct: 8 PAPFYPLE-DGTAGEQLHKAMKRYALVP--GTIA-FTDAHIE--VNITYAEYFEMSVRLA 61
Query: 127 YTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDA 186
+ L + RI + N+ + F G +F G+ P R+
Sbjct: 62 EAMK--------RYGLNTNHRIVVCSENS--LQFFMPVLGALFIGVAVAPANDIYNEREL 111
Query: 187 GS--QQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVV----AFKGWPKLTWFVTEHL-- 238
+ + + K LP ++ ++G+ + FVT HL
Sbjct: 112 LNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPP 171
Query: 239 AKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENM 298
D+ P+ D T A I ++ G GV + +
Sbjct: 172 GFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPD 231
Query: 299 VCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDL 358
+ + + L + + + + +++ + Y+ + + L
Sbjct: 232 TAI--LSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYK-IQSALLVPTL 288
Query: 359 HWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSE 418
+ LS+L + G + + P +
Sbjct: 289 FSFFAKSTLIDKYDLSNLHEIASGGAPLSK------EVGEAVAKRFHLPGIRQGYGLTET 342
Query: 419 CLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVV 478
+ + G A G+ V+P VV
Sbjct: 343 TSAILITPEGDDKPGAVGK-------------------------------VVPFFEAKVV 371
Query: 479 KMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSG 538
+D+ ++ GE+CV S Y P +N +D + SG
Sbjct: 372 DLDTGK-TLGVNQRGELCVRGPMIMSGYVNNPEATNALI------------DKDGWLHSG 418
Query: 539 LLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-L 597
+ + F+ L+ G + ++ + +L + V +
Sbjct: 419 DIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIF-----DAGVAGLPDDD 473
Query: 598 RDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPLGGIHL 657
E + + E + + V V + ++ +V + +PK G +
Sbjct: 474 AGELPAAVVVLEHGKTMTEK-EIVDYVASQVTTAKKLRGG---VVFVDEVPKGLTGKLDA 529
Query: 658 SECKRRFLEG 667
+ + ++
Sbjct: 530 RKIREILIKA 539
Score = 60.3 bits (145), Expect = 1e-09
Identities = 28/296 (9%), Positives = 78/296 (26%), Gaps = 18/296 (6%)
Query: 763 PMEEDSDATRKHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGAL 822
P D T + + + +K R A + FT +T ++ + + R+
Sbjct: 10 PFYPLEDGTA-GEQLHKAMK-RYALVPGTIAFT----DAHIEVNITYAEYFEMSVRLAEA 63
Query: 823 LLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQN-----LQTTLPTH 877
+ +NT + + + G L++G + + + + PT
Sbjct: 64 MKRY-GLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTV 122
Query: 878 QFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDH 937
F+S+ + + + + ++ ++ + + + ++
Sbjct: 123 VFVSKKGLQKILNVQKKL------PIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEY 176
Query: 938 VALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQ 997
+ D A + P + +
Sbjct: 177 DFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILS 236
Query: 998 TSQVEKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLL 1053
+G L + M ++ ++ +K + V T +
Sbjct: 237 VVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFF 292
Score = 49.9 bits (118), Expect = 2e-06
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVEL-DG 1061
F+V L I +G + P ++E+ ++ H I + V L VV L G
Sbjct: 429 FFIVDRLKSLIKYKGYQVAPAELES-ILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHG 487
Query: 1062 NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 1114
++V V + V L GV V VD VP G+ +R+ +
Sbjct: 488 KTMTEKEIVDYVASQVTTAKKLRGGV-VFVDE--VPKGLTGKLDARKIREILI 537
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin
synthetase 1 {Bacillus brevis [TaxId: 1393]}
Length = 514
Score = 112 bits (281), Expect = 4e-26
Identities = 74/545 (13%), Positives = 162/545 (29%), Gaps = 91/545 (16%)
Query: 112 TLTYGKLLSRSLKVAYTLLTKPINRTSESSLKSGDRIALVYPNNDPINFLCAFYGCIFAG 171
LTY +L ++ ++A + E + + ++ + I+ + AG
Sbjct: 48 QLTYHELNVKANQLARIFI--------EKGIGKDTLVGIMMEKS--IDLFIGILAVLKAG 97
Query: 172 IVPVPIEVPLTRRDAGSQQIGFLLGSCDIQVALTSDACLKGLPKTAAGEVVAFKGWPKLT 231
VPI++ + +I ++L ++ LT + + + F G ++
Sbjct: 98 GAYVPIDIEYPKE-----RIQYILDDSQARMLLTQKHLVHLIHN------IQFNGQVEIF 146
Query: 232 WFVTEHLAKTPKDWAPQPRLTDDTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACH 291
T + + P AY+ YT+ G+ G + + + + +
Sbjct: 147 EEDTIKIREGTNLHVPSK---STDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLN 203
Query: 292 YTEGENMVCVLDFKRETGLWHSVLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVA 351
TE + + + +W + + ++YI + + Q I + +V
Sbjct: 204 VTEKDRIGQFASISFDASVWEMFMALL--TGASLYIILKDTINDFVKFEQYINQKEITVI 261
Query: 352 VVKSRDLHWGLLATKDHKDISLSSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAIC 411
+ + + S++ L+ A SL + + + +
Sbjct: 262 TLPPTYVVH-------LDPERILSIQTLITAGSATSPSLVNKWK-------EKVTYINAY 307
Query: 412 PCASSSECLTVSVRRPGRAGVNATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMP 471
++ C T V G + P
Sbjct: 308 GPTETTICATTWVATKETIGHSVPIG--------------------------------AP 335
Query: 472 GCIMTVVKMDSPSYLCKTDEVGEICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQ 531
+ +D L E GE+C+ G YW P L++ F D +
Sbjct: 336 IQNTQIYIVDENLQLKSVGEAGELCIGGEGLARGYWKRPELTSQKFV------DNPFVPG 389
Query: 532 DTYTRSGLLGFLGPGGLVFVCGSRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAV 591
+ ++G G + G D + + G + +++ + +L + AV
Sbjct: 390 EKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYIS-----ETAV 444
Query: 592 FSIR-VLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKT 650
+ +C E+ Q+ S L + + +P T
Sbjct: 445 SVHKDHQEQPYLCAYFVSEKHIPLEQLRQFSSEELPTYMIPSYF-------IQLDKMPLT 497
Query: 651 PLGGI 655
G I
Sbjct: 498 SNGKI 502
Score = 110 bits (276), Expect = 2e-25
Identities = 77/552 (13%), Positives = 172/552 (31%), Gaps = 96/552 (17%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT +L+ +A ++ + +E+ I V ++ IDL L G V I +
Sbjct: 49 LTYHELNVKANQLARIFIEKG-IGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEY 107
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
P+ ++ I+D S++ ++L+ ++++ L+ + + I + D + ++
Sbjct: 108 PK------ERIQYILDDSQARMLLTQKHLVHLIHN------IQFNGQVEIFEEDTIKIRE 155
Query: 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLD 1378
L+ + LAY+ ++ TTG G + H +++L + + + I
Sbjct: 156 GTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQF-- 213
Query: 1379 PYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTK 1438
++W + S+ I + + + ++Q + +
Sbjct: 214 ASISFDASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHL-- 271
Query: 1439 GLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCRV 1498
+ ++T + + +V
Sbjct: 272 -----------DPERILSIQTLITAGSATSPSLVNKWKE-------------------KV 301
Query: 1499 NIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANPE 1558
+ + +V + V + G+P I E
Sbjct: 302 TYINAYGPTETTICATTWVATKETIGHSVPI---GAPIQNT------------QIYIVDE 346
Query: 1559 TKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFL 1618
GE+ + A GY + +Q+F GE +TG
Sbjct: 347 NLQLKSVGEAGELCIGGEGLARGY---WKRPELTSQKF--VDNPFVPGEKLYKTGDQARW 401
Query: 1619 RRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAEC 1678
G + +G +D + +RG R ++E+ ++ H I+E
Sbjct: 402 L------------SDG------NIEYLGRIDNQVKIRGHRVELEEVES-ILLKHMYISET 442
Query: 1679 AVF-----TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPIN 1733
AV L + + L + + ++I + +D +P+
Sbjct: 443 AVSVHKDHQEQPYLCAYFVSEKHIPLE-QLRQFSSEEL--PTYMIPSYFIQLDK--MPLT 497
Query: 1734 SRGEKQRMHLRD 1745
S G+ R L +
Sbjct: 498 SNGKIDRKQLPE 509
Score = 61.4 bits (148), Expect = 7e-10
Identities = 48/405 (11%), Positives = 112/405 (27%), Gaps = 29/405 (7%)
Query: 773 KHQFISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTG 832
+ + I ++ + + + +V + LT +L+ +A ++ + +E+ I
Sbjct: 21 RDKTIHQLFEEQVSKRPNNVAIV------CENEQLTYHELNVKANQLARIFIEKG-IGKD 73
Query: 833 DHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPHPQNLQTTLPTHQFISEILKWRAASTS 892
V ++ IDL L G V I +P+ Q+I + + R T
Sbjct: 74 TLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPK------ERIQYILDDSQARMLLTQ 127
Query: 893 EHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAF 952
+H++ + N + + + K E + D +I+ G
Sbjct: 128 KHLVHLIHNIQFNGQVEIFEEDTIKIREGTNL----HVPSKSTDLAYVIYTSGTTGNPKG 183
Query: 953 YGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTSQVEKLHDAVFVVG 1012
++ S N + + + L+ +
Sbjct: 184 TMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTGASLYI-ILKDT 242
Query: 1013 ALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELD-GNESEALDLVP 1071
D + + I + + + + L+ ++ + V
Sbjct: 243 INDFVKFEQYINQKEITVITLPPTYVVHLDPERILSIQTLITAGSATSPSLVNKWKEKVT 302
Query: 1072 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRG-----EKQRMHLRDGFLADQLDPIYIWVQ 1126
+ E + V + G + + + L + + +
Sbjct: 303 YINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDENLQLKSVGEAGELCIG 362
Query: 1127 SPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGFLR 1171
A GY + +Q+F GE +TG
Sbjct: 363 GEGLARGY---WKRPELTSQKF--VDNPFVPGEKLYKTGDQARWL 402
Score = 48.7 bits (115), Expect = 5e-06
Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVELDGN 1062
+ +G +D + +RG R ++E+ ++ H I+E AV L + +
Sbjct: 407 IEYLGRIDNQVKIRGHRVELEEVES-ILLKHMYISETAVSVHKDHQEQPYLCAYFVSEKH 465
Query: 1063 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1111
L + + ++I + +D +P+ S G+ R L +
Sbjct: 466 IPLE-QLRQFSSEEL--PTYMIPSYFIQLDK--MPLTSNGKIDRKQLPE 509
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus
subtilis [TaxId: 1423]}
Length = 536
Score = 107 bits (267), Expect = 2e-24
Identities = 66/566 (11%), Positives = 144/566 (25%), Gaps = 95/566 (16%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
+ +L RA+R+ A + I D V + P + + +GA+PV P H
Sbjct: 51 WSYRELDTRADRLAAGFQKLG-IQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSH 109
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
+ + ++ + +S + + I+ + +
Sbjct: 110 RSS-----EITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFL 164
Query: 1319 LAALYRAPTAEM-------LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSR 1371
++ +A+L S +TG+ I +H + C L S
Sbjct: 165 PLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHST 224
Query: 1372 HIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYG 1431
L + + V +++ PS +P + + +V T
Sbjct: 225 VYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPSP---SPDDAFPLIEREKVTITALVPP 281
Query: 1432 VMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVS 1491
+ + + + V + +F ++
Sbjct: 282 LAMV--------WMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMA 333
Query: 1492 TSFGCRVNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVK 1551
+ + + GK +
Sbjct: 334 EGLVNYTRLDDPEEIIVNT--------------------------------QGKPMSPYD 361
Query: 1552 VIIANPETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYAR 1611
+ G + + P+ GY+ +E A R
Sbjct: 362 ESRVWDDHDRDVKPGETGHLLTRGPYTIRGYY--KAEEHNAASFTEDGFYRTGDIVRLTR 419
Query: 1612 TGYLGFLRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRA 1671
GY+ R + I G + ++EN + A
Sbjct: 420 DGYIVVEGRA---------------------------KDQINRGGEKVAAEEVEN-HLLA 451
Query: 1672 HKKIAECAVF-----TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVD 1726
H + + A+ V + +A +L + L + + V V
Sbjct: 452 HPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERGLAAYKIPDRVEFVES 511
Query: 1727 PGVVPINSRGEKQRMHLRDGFLADQL 1752
P G+ + LR+ ++++L
Sbjct: 512 ---FPQTGVGKVSKKALRE-AISEKL 533
Score = 85.8 bits (211), Expect = 2e-17
Identities = 81/596 (13%), Positives = 166/596 (27%), Gaps = 99/596 (16%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
L +YG + N +Y +L +R+ ++A
Sbjct: 27 FGDLLRDRAAKYGDRIA------ITCGNT----HWSYRELDTRADRLAAGFQ-------- 68
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
+ ++ DR+ + PN F + G +PV S +I +
Sbjct: 69 KLGIQQKDRVVVQLPNI--KEFFEVIFALFRLGALPVFALPSHR-----SSEITYFCEFA 121
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTE-----HLAKTPKDWAPQPRLTD 253
+ + DA ++ A +V + K E L + P +
Sbjct: 122 EAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPLEDLHTEPVKLPEVKS 181
Query: 254 DTPAYIEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHS 313
A+++ + G + T + + + C + L L
Sbjct: 182 SDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSP 241
Query: 314 VLTSVLNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISL 373
+ VL V + +P +I + + ++ + + A +D
Sbjct: 242 GVLGVLYAGGRVVLS---PSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLS 298
Query: 374 SSLRLLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVN 433
S L + G + +
Sbjct: 299 SLQVLQVGGAKFSAEAARRVKAVF------------------------------------ 322
Query: 434 ATGRGVLSMSGLSYGVVRVDQENSLTSLTLQDCGQVMPGCIMTVVKMDSPSYLCKTDEVG 493
G + + G++ G+V + + + + G+ M + V D K E G
Sbjct: 323 --GCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRV-WDDHDRDVKPGETG 379
Query: 494 EICVASTGTGSQYWGLPGLSNTTFKVTPLLADGTALSQDTYTRSGLLGFLGPGGLVFVCG 553
+ T Y+ + +F + R+G + L G + V G
Sbjct: 380 HLLTRGPYTIRGYYKAEEHNAASFTEDG------------FYRTGDIVRLTRDGYIVVEG 427
Query: 554 SRDGLMTVTGRKHNADDIIATVLAVEPMKFIYRGRIAVFSIRV-LRDERICVIAEQRPDC 612
+ G K A+++ +LA + A+ S+ ER CV R +
Sbjct: 428 RAKDQINRGGEKVAAEEVENHLLAHPAVH-----DAAMVSMPDQFLGERSCVFIIPRDEA 482
Query: 613 SEEESFQWMSRVLQAVDSIHQVGLYCL--ALVPPNYLPKTPLGGIHLSECKRRFLE 666
+ L+A + Y + + P+T +G + + E
Sbjct: 483 PKAAE-------LKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAISE 531
Score = 60.8 bits (146), Expect = 1e-09
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 836
++L+ RAA + + T + +L RA+R+ A + I D V
Sbjct: 27 FGDLLRDRAAKYGDRIAIT------CGNTHWSYRELDTRADRLAAGFQKLG-IQQKDRVV 79
Query: 837 LIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 867
+ P + + +GA+PV P H
Sbjct: 80 VQLPNIKEFFEVIFALFRLGALPVFALPSHR 110
Score = 51.1 bits (121), Expect = 1e-06
Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 880 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 939
++L+ RAA + + T + +L RA+R+ A + I D V
Sbjct: 27 FGDLLRDRAAKYGDRIAIT------CGNTHWSYRELDTRADRLAAGFQKLG-IQQKDRVV 79
Query: 940 LIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTS 999
+ P + + + PS S+ T+ + ++ I P
Sbjct: 80 VQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAE----AAAYIIPDAYSGF 135
Query: 1000 QVEKLHDAVFVVGALDETIMLRGMRYHPIDIEN 1032
L V + I++ G + +E+
Sbjct: 136 DYRSLARQVQSKLPTLKNIIVAGEAEEFLPLED 168
Score = 50.8 bits (120), Expect = 1e-06
Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 20/192 (10%)
Query: 932 INTGDHVALIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLI 991
++ D + D+ G L + ++ H + G + +
Sbjct: 357 MSPYDESRVWDDHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVR 416
Query: 992 QPKCDQTSQVEKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF---- 1047
+ + V G + I G + ++EN + AH + + A+
Sbjct: 417 LTR----------DGYIVVEGRAKDQINRGGEKVAAEEVEN-HLLAHPAVHDAAMVSMPD 465
Query: 1048 -TWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQR 1106
V + +A +L + L + + V V P G+ +
Sbjct: 466 QFLGERSCVFIIPRDEAPKAAELKAFLRERGLAAYKIPDRVEFVES---FPQTGVGKVSK 522
Query: 1107 MHLRDGFLADQL 1118
LR+ ++++L
Sbjct: 523 KALRE-AISEKL 533
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes
sp. [TaxId: 512]}
Length = 503
Score = 87.8 bits (216), Expect = 3e-18
Identities = 78/554 (14%), Positives = 143/554 (25%), Gaps = 90/554 (16%)
Query: 1199 LTCSQLHKRAERVGALLLERAKINTGDHVALIFPPGIDLICAFYGCLYVGAVPVTIRPPH 1258
LT ++L R E V A L + VA++ P D++ A +GAVP + P
Sbjct: 30 LTHAELRARVEAVAARLHADG-LRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRL 88
Query: 1259 PQNLQTTLPTVRMIVDVSKSVLVLSNQNVIKLLKSKEASNVVDIKSWPTILDTDDMPKKK 1318
+ ++ + + ++ + I ++ +
Sbjct: 89 KS------AELAELIKRGEMTAAVIAVGRQVADAIFQSGSGARIIFLGDLVRDGEPYSYG 142
Query: 1319 LAALYRAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRH-IALCL 1377
A++ ++ TTG+ + A S M L RH + L L
Sbjct: 143 PPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGL 202
Query: 1378 DPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCT 1437
P + VL + + + ++ E P L V Q +V F + ++
Sbjct: 203 MPLYHVVGFFAVLVAALALDGTYVVVE---EFRPVDALQLVQQEQVTSLFATPTHLDALA 259
Query: 1438 KGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALGLSPRAVSTSFGCR 1497
++ L +R P L +
Sbjct: 260 A-----AAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQH---------------LPGE 299
Query: 1498 VNIAICLQGASSPEPSCVYVDLRALRNDRVSLVERGSPHSLCLLESGKLLPGVKVIIANP 1557
A + + S V I
Sbjct: 300 KVNIYGTTEAMNSLYMRQPKTGTEMAPGFFS-------------------EVRIVRIGGG 340
Query: 1558 ETKGQCGDSHLGEIWVQSPHNASGYFSLYGDESEYAQQFSARLVTGNTGELYARTGYLGF 1617
+ I S GY A++ + ++ G +
Sbjct: 341 VDEIVANGEEGELIVAASDSAFVGY---LNQPQATAEKLQDGWYRTSDVAVWTPEGTVRI 397
Query: 1618 LRRTSPAGVAGAPVPPGVSKLHDAVFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAE 1677
L R +D+ I+ G HP +IE V+ + E
Sbjct: 398 LGR---------------------------VDDMIISGGENIHPSEIER-VLGTAPGVTE 429
Query: 1678 CAVF-----TWTNLLVVVVEL-DGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVP 1731
V W + V G A L ++ L + ++D +P
Sbjct: 430 VVVIGLADQRWGQSVTACVVPRLGETLSADALDTFCRSSELADFKRPKRY-FILDQ--LP 486
Query: 1732 INSRGEKQRMHLRD 1745
N+ + R L
Sbjct: 487 KNALNKVLRRQLVQ 500
Score = 77.8 bits (190), Expect = 5e-15
Identities = 55/362 (15%), Positives = 105/362 (29%), Gaps = 34/362 (9%)
Query: 79 LPRNLEAAIQRYGSATYKAPVATVLDPNGKLSITLTYGKLLSRSLKVAYTLLTKPINRTS 138
+ L A R A + G LT+ +L +R VA L
Sbjct: 4 VNEMLRRAATRAPDHC-----ALAVPARGL---RLTHAELRARVEAVAARLH-------- 47
Query: 139 ESSLKSGDRIALVYPNNDPINFLCAFYGCIFAGIVPVPIEVPLTRRDAGSQQIGFLLGSC 198
L+ R+A+V PN+ + + A G VP + L S ++ L+
Sbjct: 48 ADGLRPQQRVAVVAPNS--ADVVIAILALHRLGAVPALLNPRLK-----SAELAELIKRG 100
Query: 199 DIQVALTSDACLKGLPKTAAGEVVAFKGWPKLTWFVTEHLAKTPKDWAPQPRLTDDTPAY 258
++ A+ + A + + L V + + P+ PA+
Sbjct: 101 EMTAAVIAVGRQV---ADAIFQSGSGARIIFLGDLVRDGEPYSYGPPIEDPQREPAQPAF 157
Query: 259 IEYTTDRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSV 318
I YT+ G + + A S ++ G + V + + +
Sbjct: 158 IFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVA 217
Query: 319 LNGMHAVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHK-DISLSSLR 377
+ Y+ + P +Q++ + + + L A + L SLR
Sbjct: 218 ALALDGTYVVVE--EFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLR 275
Query: 378 LLLVGDGANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGR 437
+ P ++ Q I + L + + G
Sbjct: 276 HVTFAGATMPDAVLETV-----HQHLPGEKVNIYGTTEAMNSLYMRQPKTGTEMAPGFFS 330
Query: 438 GV 439
V
Sbjct: 331 EV 332
Score = 62.0 bits (149), Expect = 4e-10
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 777 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 836
++E+L+ A +H + LT ++L R E V A L + VA
Sbjct: 4 VNEMLRRAATRAPDHCALAVPARGLR----LTHAELRARVEAVAARLHADG-LRPQQRVA 58
Query: 837 LIFPPGIDLICAFYGCLYVGAVPVTIRPPHP 867
++ P D++ A +GAVP + P
Sbjct: 59 VVAPNSADVVIAILALHRLGAVPALLNPRLK 89
Score = 48.5 bits (114), Expect = 6e-06
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 10/110 (9%)
Query: 1008 VFVVGALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVF-----TWTNLLVVVVEL-DG 1061
V ++G +D+ I+ G HP +IE V+ + E V W + V G
Sbjct: 395 VRILGRVDDMIISGGENIHPSEIER-VLGTAPGVTEVVVIGLADQRWGQSVTACVVPRLG 453
Query: 1062 NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 1111
A L ++ L + ++D +P N+ + R L
Sbjct: 454 ETLSADALDTFCRSSELADFKRPKRY-FILDQ--LPKNALNKVLRRQLVQ 500
Score = 48.5 bits (114), Expect = 6e-06
Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 5/137 (3%)
Query: 880 ISEILKWRAASTSEHVIFTLLNSKGSAAQLLTCSQLHKRAERVGALLLERAKINTGDHVA 939
++E+L+ A +H + LT ++L R E V A L + VA
Sbjct: 4 VNEMLRRAATRAPDHCALAVPARGLR----LTHAELRARVEAVAARLHADG-LRPQQRVA 58
Query: 940 LIFPPGIDLICAFYGCLCCPSNHPTPSPSESSNHATHRQNDSGRQQICSSLIQPKCDQTS 999
++ P D++ A + +P S ++ + D
Sbjct: 59 VVAPNSADVVIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIF 118
Query: 1000 QVEKLHDAVFVVGALDE 1016
Q +F+ + +
Sbjct: 119 QSGSGARIIFLGDLVRD 135
>d1yvra2 c.62.1.5 (A:364-537) 60-kda SS-A/Ro ribonucleoprotein,
RoRNP {African clawed frog (Xenopus laevis) [TaxId:
8355]}
Length = 174
Score = 29.8 bits (66), Expect = 2.2
Identities = 23/189 (12%), Positives = 49/189 (25%), Gaps = 35/189 (18%)
Query: 264 DRDGSVMGVTVTRAAMLSHCRALTQACHYTEGENMVCVLDFKRETGLWHSVLTSVLNGMH 323
D S M V + + + A E ++ F E + +L+ +
Sbjct: 13 DVSAS-MNQRVLGSILNASVVAAAMCMLVARTEKDSHMVAFSDEMLPCPITVNMLLHEVV 71
Query: 324 AVYIPYALMKVNPASWMQMITKYRASVAVVKSRDLHWGLLATKDHKDISLSSLRLLLVGD 383
+ + A M K + + ++ D
Sbjct: 72 EKMSDITMGSTDCALPMLWAQKTNTAADIF-------------------------IVFTD 106
Query: 384 GANPWSLSSCDQFLSVFQSKGLRPDAICPCASSSECLTVSVRRPGRAGVNATGRGVLSMS 443
L ++ K P + + ++ G + + RG+L +
Sbjct: 107 CETNVEDVHPATALKQYREKMGIPAKL---------IVCAMTSNGFSIADPDDRGMLDIC 157
Query: 444 GLSYGVVRV 452
G G + V
Sbjct: 158 GFDSGALDV 166
>d1y7ba1 b.29.1.23 (A:325-534) Beta-D-xylosidase C-terminal domain
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 210
Score = 29.7 bits (66), Expect = 2.3
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 8/41 (19%)
Query: 1110 RDGFLADQLDPIYIWVQSPHNAS--------GYFSLYGDES 1142
+D F +D+L+ + ++ P + G LYG ES
Sbjct: 7 KDNFDSDKLNINFQSLRIPLTENIASLKAKKGNLRLYGKES 47
>d2exha1 b.29.1.23 (A:325-535) Beta-D-xylosidase C-terminal domain
{Geobacillus stearothermophilus [TaxId: 1422]}
Length = 211
Score = 29.7 bits (66), Expect = 2.8
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 8/41 (19%)
Query: 1110 RDGFLADQLDPIYIWVQSPHNAS--------GYFSLYGDES 1142
+D F D L+ + ++ P G+ LYG ES
Sbjct: 7 KDDFDGDTLNHHFQTLRIPLGEDIATLKARPGHLRLYGRES 47
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 29.7 bits (66), Expect = 3.1
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 14/126 (11%)
Query: 596 VLRDERICVIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYLPKTPL-GG 654
I +P E+F ++V++ + V LY + P Y+ + G
Sbjct: 37 TWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG 96
Query: 655 IHLSECKRRFLEGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPAN 714
L K + P V + + +A + ++ +L AN
Sbjct: 97 SLLDFLKGETGKYLRLPQLVDMAAQIA-------------SGMAYVERMNYVHRDLRAAN 143
Query: 715 VLLCPH 720
+L+ +
Sbjct: 144 ILVGEN 149
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 321
Score = 29.6 bits (66), Expect = 3.8
Identities = 8/44 (18%), Positives = 19/44 (43%)
Query: 604 VIAEQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYL 647
I + +E E ++ +V +A+ +H + + P N +
Sbjct: 91 RINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENII 134
>d1czan3 c.55.1.3 (N:466-670) Mammalian type I hexokinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 205
Score = 28.7 bits (64), Expect = 4.6
Identities = 16/92 (17%), Positives = 26/92 (28%), Gaps = 13/92 (14%)
Query: 656 HLSECKRRFLEGNLHPANVLLCPHTCVTNLPKPREIHSGNCLAGQCKRRFLEGNLHPANV 715
+ L H V+ + V P G FL +L N
Sbjct: 25 RMRAEMELGLRKQTHNNAVVKMLPSFVRRTPD-----------GTENGDFLALDLGGTNF 73
Query: 716 LLCPHTCVTNLPKPREIHSDI--GPASVMVGN 745
+ + + E+H+ I P +M G
Sbjct: 74 RVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGT 105
>d1vqoh1 d.41.4.1 (H:1-163) Ribosomal protein L10e {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 163
Score = 28.3 bits (63), Expect = 5.6
Identities = 8/44 (18%), Positives = 12/44 (27%)
Query: 58 PKPEGGVMTPAPGESLVVPSGLPRNLEAAIQRYGSATYKAPVAT 101
K G GE L + E + + A K +
Sbjct: 118 GKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSC 161
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase
kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId:
9986]}
Length = 277
Score = 28.9 bits (64), Expect = 6.0
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 607 EQRPDCSEEESFQWMSRVLQAVDSIHQVGLYCLALVPPNYL 647
++ SE+E+ + M +L+ + ++H++ + L P N L
Sbjct: 102 TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL 142
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.414
Gapped
Lambda K H
0.267 0.0419 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 6,472,001
Number of extensions: 306480
Number of successful extensions: 728
Number of sequences better than 10.0: 1
Number of HSP's gapped: 680
Number of HSP's successfully gapped: 47
Length of query: 1761
Length of database: 2,407,596
Length adjustment: 98
Effective length of query: 1663
Effective length of database: 1,062,056
Effective search space: 1766199128
Effective search space used: 1766199128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)