Query psy1434
Match_columns 357
No_of_seqs 298 out of 2224
Neff 7.7
Searched_HMMs 13730
Date Fri Aug 16 17:25:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1434.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1434hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tyea_ b.69.8.1 (A:) Integrin 100.0 1.8E-37 1.3E-41 308.0 18.7 221 26-252 228-452 (452)
2 d1jv2a4 b.69.8.1 (A:1-438) Int 100.0 3.4E-35 2.5E-39 289.8 17.9 223 24-251 213-438 (438)
3 d1jv2a4 b.69.8.1 (A:1-438) Int 99.9 1.2E-22 8.5E-27 199.4 12.9 243 4-285 125-395 (438)
4 d1tyea_ b.69.8.1 (A:) Integrin 99.9 1.2E-21 8.7E-26 193.2 19.5 217 31-284 167-410 (452)
5 d1jv2a1 b.1.15.1 (A:439-598) T 99.2 2.7E-11 2E-15 102.0 8.3 88 264-356 3-122 (160)
6 d1ctda_ a.39.1.5 (A:) Troponin 22.4 12 0.00084 20.9 0.5 11 158-168 13-23 (34)
7 d2cclb1 a.139.1.1 (B:1-59) End 12.4 27 0.0019 22.1 0.5 11 225-235 35-45 (59)
8 d1dava_ a.139.1.1 (A:) Cellulo 12.1 29 0.0021 22.8 0.7 13 156-168 5-17 (71)
9 d1tg7a1 b.149.1.1 (A:570-666) 5.2 1.8E+02 0.013 20.1 2.4 22 151-174 46-68 (97)
10 d1mxga1 b.71.1.1 (A:362-435) B 3.2 1.8E+02 0.013 18.3 0.9 13 27-39 57-69 (74)
No 1
>d1tyea_ b.69.8.1 (A:) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform IIb [TaxId: 9606]}
Probab=100.00 E-value=1.8e-37 Score=307.96 Aligned_cols=221 Identities=38% Similarity=0.694 Sum_probs=186.5
Q ss_pred CCCCCCcceeeEEEEeec---CCCeEEEeecCCCCeeeEEEEEEcCCceeeeccCCccccccceEEEEEEeCCCCCceEE
Q psy1434 26 PTDDGSYMGYSVASGFFS---GESGVAVGIPRGARLLGKVALYTTNMTNLQNITGEQLGAYFAYAVTTSDVDGDGADDLI 102 (357)
Q Consensus 26 ~~~~~sy~G~sva~gd~~---g~~~~vvGaP~~~~~~G~V~i~~~~~~~~~~~~g~~~~s~fG~sva~~D~ngDG~~Dlv 102 (357)
..+.++||||||++|+++ ..+++++|+|+.....|+|++|.++.+.+..+.+++.+++||++|+++|+|+||++||+
T Consensus 228 ~~~~~~~~G~sva~g~~~~~~~~~~~v~g~~~~~~~~G~v~i~~~~~~~~~~~~~~~~g~~fg~sv~~~D~ngDG~~Dl~ 307 (452)
T d1tyea_ 228 PEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDSYYQRLHRLRAEQMASYFGHSVAVTDVNGDGRHDLL 307 (452)
T ss_dssp GGGTTCCTTSEEEEECCSSCTTSCEEEEEETTHHHHTCEEEEECTTCCEEEEEECSSTTSCTTSEEEEECTTSSSSCEEE
T ss_pred ccccCCccceEEEEeeccCCCCcceEEeccccccCcCCEEEEEecCCceEEEecccccCCceeeEEEEeecCCCCCccEE
Confidence 345678999999999998 35678889999766789999999988888889999999999999999999999999999
Q ss_pred EeccCcCCCCCCCCCccccEEEEEEeCCCccceEE-eeeecCCCcCCCcceeEEeeccCCCCCCceeEEcCCCCCCCCcc
Q psy1434 103 IGAPLYTNPTNNVGHYETGRIYVVYQGKETYKFRR-LHTRDGKNSKARFGLSLCNLGDINKDGFGDFAVGAPYDGPNERG 181 (357)
Q Consensus 103 vGaP~~~~~~~~~~~~~~G~Vyv~~~~~~~~~~~~-~~~~~g~~~~~~fG~sva~~gDiN~DG~~Dl~VgaP~~~~~~~G 181 (357)
|++|.+..........+.|+||||.+......+.. ...+.+.....+||.+++.+||+|+||+.||+||||++.....|
T Consensus 308 Vga~~~~~~~~~~~~~~~G~v~v~~~~~~~~~~~~~~~~~~g~~~~~~fG~~~~~~gD~n~DG~~Dl~Vgap~~~~~~~G 387 (452)
T d1tyea_ 308 VGAPLYMESRADRKLAEVGRVYLFLQPRGPHALGAPSLLLTGTQLYGRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRG 387 (452)
T ss_dssp EECTTCEEEETTTEEEECBEEEEECCCSSSCCCCSCSEEEECCSTTCCBTSEEEECCCSSCSSSCCEEEEETTCSSSSSC
T ss_pred EeecccccccCcCccccCCeEEEEecCCCcccccccceeecCccccCCccceEEEEEccCCCCCceEEEEccCCCCCCCc
Confidence 99998865322223345799999998765322222 23455677789999999999999999999999999987656789
Q ss_pred EEEEEeCCCCCCCCCCceEEecceeccccCCCccccceeeeccccCCCCCCCcEEEeecCCCcEEEEccCC
Q psy1434 182 VVYIYHGSPIGARENPSQIITAEEVNFGLQGSLTTFGFSLAGGVDLDENQYPDLVIGAYESNTAFVLRSTA 252 (357)
Q Consensus 182 ~Vyiy~g~~~g~~~~~~q~i~~~~~~~g~~~~~~~FG~si~~~~D~d~DG~~Dl~VGa~~~~~v~~~rsrp 252 (357)
+||||+++..+++..+.+++..... ...+||++++..+|+|+||++||+|||+.+++|+|||+||
T Consensus 388 ~vyi~~~~~~g~~~~~~~~~~~~~~------~~~~fG~s~~~~~D~d~DG~~DlvVGa~~~~~~~l~r~~p 452 (452)
T d1tyea_ 388 QVLVFLGQSEGLRSRPSQVLDSPFP------TGSAFGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQP 452 (452)
T ss_dssp EEEEECBCSSSBCSSCSEEEECCSC------TTCCTTSEEEEEECSSCSSSCEEEEEEGGGTEEEEECBCC
T ss_pred eEEEEEcCCCCccccceeeeccCCc------ccCceeeEeeeeeeeCCCCCeeEEEEccCCCeEEEEeCCC
Confidence 9999999988888888887765432 4688999998888999999999999999999999999998
No 2
>d1jv2a4 b.69.8.1 (A:1-438) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform V [TaxId: 9606]}
Probab=100.00 E-value=3.4e-35 Score=289.76 Aligned_cols=223 Identities=39% Similarity=0.721 Sum_probs=186.3
Q ss_pred CCCCCCCCcceeeEEEEeec--CCCeEEEeecCCCCeeeEEEEEEcC-CceeeeccCCccccccceEEEEEEeCCCCCce
Q psy1434 24 GPPTDDGSYMGYSVASGFFS--GESGVAVGIPRGARLLGKVALYTTN-MTNLQNITGEQLGAYFAYAVTTSDVDGDGADD 100 (357)
Q Consensus 24 ~~~~~~~sy~G~sva~gd~~--g~~~~vvGaP~~~~~~G~V~i~~~~-~~~~~~~~g~~~~s~fG~sva~~D~ngDG~~D 100 (357)
......++||||||+++||+ |..+||+|||++....|.|++|+.. ...++.+.+.+.+++|+++++++|+|+||+.|
T Consensus 213 ~~~~~~~~~~G~sva~gd~~~DG~~dvvvGap~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~D~ngDg~~D 292 (438)
T d1jv2a4 213 AQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYAD 292 (438)
T ss_dssp CCGGGCSCCBTSEEEEECCSSSSSCEEEEEETTHHHHTCEEEEEETTTCCEEEEEECSSTTSCTTSEEEEECTTSSSCCE
T ss_pred cccccccccccceEEEeeECCCCcceEEEEeeccCCCceEEEEecCCCCcceeeeecccCCCccceeEEEEEecCCcccc
Confidence 33446789999999999999 7789999999976678999999864 44556788889999999999999999999999
Q ss_pred EEEeccCcCCCCCCCCCccccEEEEEEeCCCccceEEeeeecCCCcCCCcceeEEeeccCCCCCCceeEEcCCCCCCCCc
Q psy1434 101 LIIGAPLYTNPTNNVGHYETGRIYVVYQGKETYKFRRLHTRDGKNSKARFGLSLCNLGDINKDGFGDFAVGAPYDGPNER 180 (357)
Q Consensus 101 lvvGaP~~~~~~~~~~~~~~G~Vyv~~~~~~~~~~~~~~~~~g~~~~~~fG~sva~~gDiN~DG~~Dl~VgaP~~~~~~~ 180 (357)
|+|++|.+............|++|+|.+... .+.....+.+....++||.+++.++|+|+||+.||+||||+......
T Consensus 293 l~vg~~~~~~~~~~~~~~~~g~v~~~~~~~~--~~~~~~~~~~~~~~~~fG~sv~~~gD~ngDG~~Di~Vgap~~~~~~~ 370 (438)
T d1jv2a4 293 VFIGAPLFMDRGSDGKLQEVGQVSVSLQRAS--GDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKK 370 (438)
T ss_dssp EEEEETTCEEECTTSCEEECCEEEEEEECTT--SCEEEECCBCSSSSSCSBTCCBCCSCSSCSSSCCCBEEETTCSGGGC
T ss_pred EEEeccccccccccccccccceeeeeccccc--ccccceeccCcccccccCceeEeeeeecCCCCcCEEEeCCCCCCCCC
Confidence 9999998865333223345689999988765 23344445677778999999999999999999999999998755678
Q ss_pred cEEEEEeCCCCCCCCCCceEEecceeccccCCCccccceeeeccccCCCCCCCcEEEeecCCCcEEEEccC
Q psy1434 181 GVVYIYHGSPIGARENPSQIITAEEVNFGLQGSLTTFGFSLAGGVDLDENQYPDLVIGAYESNTAFVLRST 251 (357)
Q Consensus 181 G~Vyiy~g~~~g~~~~~~q~i~~~~~~~g~~~~~~~FG~si~~~~D~d~DG~~Dl~VGa~~~~~v~~~rsr 251 (357)
|+||||+++..+....+.|++.+.... +...+.||.|++..+|||+||++||+|||+.+++|+|||+|
T Consensus 371 G~vyi~~g~~~g~~~~~~~~~~~~~~~---~~~~~~fG~Svs~~~D~dgDG~~DlvVGa~~~d~~~l~r~r 438 (438)
T d1jv2a4 371 GIVYIFNGRSTGLNAVPSQILEGQWAA---RSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRAR 438 (438)
T ss_dssp CEEECCCEETTEECCSCSCEEECCCCC---SSSCCCTTSEEECCSCCSSSSSCEEEEEETTTTEEEEEEBC
T ss_pred ceEEEEecCCCCccccceEEeeccccc---cccccccceeeeeeeeeCCCCCccEEEEecCCCcEEEEeCC
Confidence 999999998888887888888765432 22468999999988999999999999999999999999998
No 3
>d1jv2a4 b.69.8.1 (A:1-438) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform V [TaxId: 9606]}
Probab=99.87 E-value=1.2e-22 Score=199.37 Aligned_cols=243 Identities=26% Similarity=0.369 Sum_probs=166.6
Q ss_pred cceEEEEecCCCCceEEeecCCC-C---CCCCcceeeEEEEeecCCCeEEEeecCCCCeeeEEEEEEcC-------Cc--
Q psy1434 4 SGQVISQNLYDRPEFKATKEGPP-T---DDGSYMGYSVASGFFSGESGVAVGIPRGARLLGKVALYTTN-------MT-- 70 (357)
Q Consensus 4 ~g~~~~~~~~~~~~~~~~~~~~~-~---~~~sy~G~sva~gd~~g~~~~vvGaP~~~~~~G~V~i~~~~-------~~-- 70 (357)
.|.+|++..... ..+...+... . .....+|++++. .....+++|||+...+.|.+..+... ..
T Consensus 125 ~G~~yv~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~s~~~---~~~~~~~~ga~g~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (438)
T d1jv2a4 125 VGTCFLQDGTKT-VEYAPCRSQDIDADGQGFCQGGFSIDF---TKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVY 200 (438)
T ss_dssp CCEEEEECTTCC-EEECTTCCSCCSTTTTTTCCTTSEEEC---CTTSCCEEEETTHHHHTBEEEEECHHHHSTTCCTTCS
T ss_pred eEEEEEecCCcc-eeecccccccccccccccccceeEEEe---ecCCceeEecccccccCceeEEecccceeeccCCccc
Confidence 388898865322 2222211111 1 223456777653 24457889999977788888776421 00
Q ss_pred ------eee--eccCCccccccceEEEEEEeCCCCCceEEEeccCcCCCCCCCCCccccEEEEEEeCCCccceEEeeeec
Q psy1434 71 ------NLQ--NITGEQLGAYFAYAVTTSDVDGDGADDLIIGAPLYTNPTNNVGHYETGRIYVVYQGKETYKFRRLHTRD 142 (357)
Q Consensus 71 ------~~~--~~~g~~~~s~fG~sva~~D~ngDG~~DlvvGaP~~~~~~~~~~~~~~G~Vyv~~~~~~~~~~~~~~~~~ 142 (357)
... ........+|||++|+++|+|+||++|||||+|++.. ..|+||+|..... .....+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~G~sva~gd~~~DG~~dvvvGap~~~~--------~~g~v~~~~~~~~----~~~~~~~ 268 (438)
T d1jv2a4 201 SIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAAR--------TLGMVYIYDGKNM----SSLYNFT 268 (438)
T ss_dssp CCCCTTEEECCCCCGGGCSCCBTSEEEEECCSSSSSCEEEEEETTHHH--------HTCEEEEEETTTC----CEEEEEE
T ss_pred cccccccccccccccccccccccceEEEeeECCCCcceEEEEeeccCC--------CceEEEEecCCCC----cceeeee
Confidence 001 1223456789999999999999999999999998764 4689999986543 2223344
Q ss_pred CCCcCCCcceeEEeeccCCCCCCceeEEcCCCCCC-------CCccEEEEEeCCCCCCCCCCceEEecceeccccCCCcc
Q psy1434 143 GKNSKARFGLSLCNLGDINKDGFGDFAVGAPYDGP-------NERGVVYIYHGSPIGARENPSQIITAEEVNFGLQGSLT 215 (357)
Q Consensus 143 g~~~~~~fG~sva~~gDiN~DG~~Dl~VgaP~~~~-------~~~G~Vyiy~g~~~g~~~~~~q~i~~~~~~~g~~~~~~ 215 (357)
+......|+++++. +|+|+||+.||+|++|+... ...|++|+|.+...+.. +..... + .....
T Consensus 269 ~~~~~~~~~~s~~~-~D~ngDg~~Dl~vg~~~~~~~~~~~~~~~~g~v~~~~~~~~~~~----~~~~~~----~-~~~~~ 338 (438)
T d1jv2a4 269 GEQMAAYFGFSVAA-TDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDF----QTTKLN----G-FEVFA 338 (438)
T ss_dssp CSSTTSCTTSEEEE-ECTTSSSCCEEEEEETTCEEECTTSCEEECCEEEEEEECTTSCE----EEECCB----C-SSSSS
T ss_pred cccCCCccceeEEE-EEecCCccccEEEeccccccccccccccccceeeeecccccccc----cceecc----C-ccccc
Confidence 56677889999885 59999999999999997421 23688999988764432 111111 1 12468
Q ss_pred ccceeeeccccCCCCCCCcEEEeecCCCcEEEEccCCCCCCCCCCCeEEEEEcccccccCCCceeeeccc
Q psy1434 216 TFGFSLAGGVDLDENQYPDLVIGAYESNTAFVLRSTAPYDGPNERGVVYIYHGSPIGARENPSQIITAEE 285 (357)
Q Consensus 216 ~FG~si~~~~D~d~DG~~Dl~VGa~~~~~v~~~rsrpv~~~~~~~G~v~~~~~~~~~~~~~~~q~i~~~~ 285 (357)
+||.+++..+|+|+||+.||+||||. .+.+.+|+||++.++.......+.|+|....
T Consensus 339 ~fG~sv~~~gD~ngDG~~Di~Vgap~-------------~~~~~~G~vyi~~g~~~g~~~~~~~~~~~~~ 395 (438)
T d1jv2a4 339 RFGSAIAPLGDLDQDGFNDIAIAAPY-------------GGEDKKGIVYIFNGRSTGLNAVPSQILEGQW 395 (438)
T ss_dssp CSBTCCBCCSCSSCSSSCCCBEEETT-------------CSGGGCCEEECCCEETTEECCSCSCEEECCC
T ss_pred ccCceeEeeeeecCCCCcCEEEeCCC-------------CCCCCCceEEEEecCCCCccccceEEeeccc
Confidence 99999999999999999999999973 3456689999998876666666667776554
No 4
>d1tyea_ b.69.8.1 (A:) Integrin alpha N-terminal domain {Human (Homo sapiens), isoform IIb [TaxId: 9606]}
Probab=99.87 E-value=1.2e-21 Score=193.23 Aligned_cols=217 Identities=28% Similarity=0.461 Sum_probs=155.7
Q ss_pred CcceeeEEEEeecCCCeEEEeecCCCCeeeEEEEEEcCCc----------------ee--eeccCCccccccceEEEEEE
Q psy1434 31 SYMGYSVASGFFSGESGVAVGIPRGARLLGKVALYTTNMT----------------NL--QNITGEQLGAYFAYAVTTSD 92 (357)
Q Consensus 31 sy~G~sva~gd~~g~~~~vvGaP~~~~~~G~V~i~~~~~~----------------~~--~~~~g~~~~s~fG~sva~~D 92 (357)
..+|++++ +++...+++|+|....|.|.++.+..... .+ .........+|||++|+++|
T Consensus 167 ~~~g~s~~---~~~~~~~~~ga~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~sva~g~ 243 (452)
T d1tyea_ 167 CEAGFSSV---VTQAGELVLGAPGGYYFLGLLAQAPVADIFSSYRPGILLWHVSSQSLSFDSSNPEYFDGYWGYSVAVGE 243 (452)
T ss_dssp CCBTSEEE---ECTTSEEEEEETTHHHHTCEEEEEEHHHHHHHCCTTCCSCCCTTCEECCCCCCGGGTTCCTTSEEEEEC
T ss_pred ccCceeee---eccCccEeecCccceeccceEEeecccccccccccceeeeccCCccccccccCccccCCccceEEEEee
Confidence 34566644 45566788999997789999988763210 00 01112345689999999999
Q ss_pred eCCCCCce-EEEeccCcCCCCCCCCCccccEEEEEEeCCCccceEEeeeecCCCcCCCcceeEEeeccCCCCCCceeEEc
Q psy1434 93 VDGDGADD-LIIGAPLYTNPTNNVGHYETGRIYVVYQGKETYKFRRLHTRDGKNSKARFGLSLCNLGDINKDGFGDFAVG 171 (357)
Q Consensus 93 ~ngDG~~D-lvvGaP~~~~~~~~~~~~~~G~Vyv~~~~~~~~~~~~~~~~~g~~~~~~fG~sva~~gDiN~DG~~Dl~Vg 171 (357)
+++|+..| +++|+|+... ..|+||||..... .+ ..+.+.+..++||++|+ ++|+|+||+.||+|+
T Consensus 244 ~~~~~~~~~~v~g~~~~~~--------~~G~v~i~~~~~~--~~---~~~~~~~~g~~fg~sv~-~~D~ngDG~~Dl~Vg 309 (452)
T d1tyea_ 244 FDGDLNTTEYVVGAPTWSW--------TLGAVEILDSYYQ--RL---HRLRAEQMASYFGHSVA-VTDVNGDGRHDLLVG 309 (452)
T ss_dssp CSSCTTSCEEEEEETTHHH--------HTCEEEEECTTCC--EE---EEEECSSTTSCTTSEEE-EECTTSSSSCEEEEE
T ss_pred ccCCCCcceEEeccccccC--------cCCEEEEEecCCc--eE---EEecccccCCceeeEEE-EeecCCCCCccEEEe
Confidence 99987655 5778988653 4699999976554 22 23456778899999998 469999999999999
Q ss_pred CCCCCC-------CCccEEEEEeCCCCCCCC-CCceEEecceeccccCCCccccceeeeccccCCCCCCCcEEEeecCCC
Q psy1434 172 APYDGP-------NERGVVYIYHGSPIGARE-NPSQIITAEEVNFGLQGSLTTFGFSLAGGVDLDENQYPDLVIGAYESN 243 (357)
Q Consensus 172 aP~~~~-------~~~G~Vyiy~g~~~g~~~-~~~q~i~~~~~~~g~~~~~~~FG~si~~~~D~d~DG~~Dl~VGa~~~~ 243 (357)
+|++.. .+.|+||||.+...+... .....+... ....+||.+++..+|+|+||+.||+||||.
T Consensus 310 a~~~~~~~~~~~~~~~G~v~v~~~~~~~~~~~~~~~~~~g~-------~~~~~fG~~~~~~gD~n~DG~~Dl~Vgap~-- 380 (452)
T d1tyea_ 310 APLYMESRADRKLAEVGRVYLFLQPRGPHALGAPSLLLTGT-------QLYGRFGSAIAPLGDLDRDGYNDIAVAAPY-- 380 (452)
T ss_dssp CTTCEEEETTTEEEECBEEEEECCCSSSCCCCSCSEEEECC-------STTCCBTSEEEECCCSSCSSSCCEEEEETT--
T ss_pred ecccccccCcCccccCCeEEEEecCCCcccccccceeecCc-------cccCCccceEEEEEccCCCCCceEEEEccC--
Confidence 997531 246999999987644332 222223222 146789999999999999999999999973
Q ss_pred cEEEEccCCCCCCCCCCCeEEEEEcccccccCCCceeeecc
Q psy1434 244 TAFVLRSTAPYDGPNERGVVYIYHGSPIGARENPSQIITAE 284 (357)
Q Consensus 244 ~v~~~rsrpv~~~~~~~G~v~~~~~~~~~~~~~~~q~i~~~ 284 (357)
......|+||++++........+.+++...
T Consensus 381 -----------~~~~~~G~vyi~~~~~~g~~~~~~~~~~~~ 410 (452)
T d1tyea_ 381 -----------GGPSGRGQVLVFLGQSEGLRSRPSQVLDSP 410 (452)
T ss_dssp -----------CSSSSSCEEEEECBCSSSBCSSCSEEEECC
T ss_pred -----------CCCCCCceEEEEEcCCCCccccceeeeccC
Confidence 345678999999988776666666666543
No 5
>d1jv2a1 b.1.15.1 (A:439-598) Thigh, calf-1 and calf-2 domains of integrin alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=2.7e-11 Score=101.96 Aligned_cols=88 Identities=20% Similarity=0.258 Sum_probs=66.1
Q ss_pred EEEEcccccccCCCceeeecccccccce---------------------------eEEEEEEEccCCCC--CCceEEecC
Q psy1434 264 YIYHGSPIGARENPSQIITAEEVNFGLQ---------------------------ELNVQILLDSKKPK--SPRMFFLSD 314 (357)
Q Consensus 264 ~~~~~~~~~~~~~~~q~i~~~~~~c~~~---------------------------~~~~~~~ld~~~~~--~~r~~f~~~ 314 (357)
+.+.++..+.| +.|+++.++|.++ .|+|++.||+.+.+ .+|++|+.+
T Consensus 3 v~v~~~l~~~p----~~Id~~~~~C~~~~~~~~~~C~~v~~Cf~y~g~~~~~~~i~l~~~l~lD~~~~~~~~~R~~F~~~ 78 (160)
T d1jv2a1 3 ITVNAGLEVYP----SILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPRKLNFQVELLLDKLKQKGAIRRALFLYS 78 (160)
T ss_dssp EEEECCEEESS----CEECTTCCCBCCSSSCCCBCEEEEEEEEEEECSSSCCSCBCCEEEEEECTTCCTTCCCCCEESSS
T ss_pred EEEEEEEEECC----ceeCCcccccccCCCCceEEeEEEEEEEEEccCcCCCceEEEEEEEEEEeccCCCCcccEEEcCC
Confidence 66777777655 4699998888642 67788888886544 379999753
Q ss_pred CCceEEEEEEEEe-CCCCCeEEEEEEee--cCCcceecceeeeee
Q psy1434 315 EGKNVINQTLLLI-KGTQFCKSTVDMVC--EAERPLCTPITPAVS 356 (357)
Q Consensus 315 ~~~~~~~~~~~l~-~~~~~C~~~~~~~~--~~~~D~l~pi~~~~~ 356 (357)
+.....+++.+. .+++.|.++++||+ ++++|||+||.|+|+
T Consensus 79 -~~~~~~~~~~l~~~~~~~C~~~~~yl~~~~~i~D~lsPI~i~l~ 122 (160)
T d1jv2a1 79 -RSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFME 122 (160)
T ss_dssp -CSSEEEEECCBCSTTCCEEEEEEEECCCGGGCCCSSCCEEEEEE
T ss_pred -CCCcEEEEEEEcCCCCcccEEEEEEEccCCccceeecCEEEEEE
Confidence 444566666665 35667999999997 479999999999986
No 6
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.40 E-value=12 Score=20.94 Aligned_cols=11 Identities=45% Similarity=0.558 Sum_probs=9.1
Q ss_pred ccCCCCCCcee
Q psy1434 158 GDINKDGFGDF 168 (357)
Q Consensus 158 gDiN~DG~~Dl 168 (357)
=|-|+|||-|.
T Consensus 13 fDkNaDGyiD~ 23 (34)
T d1ctda_ 13 FDKNADGYIDI 23 (34)
T ss_dssp TCCSSSSCBCH
T ss_pred HccCCcccccH
Confidence 38899999885
No 7
>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}
Probab=12.41 E-value=27 Score=22.06 Aligned_cols=11 Identities=27% Similarity=0.359 Sum_probs=8.7
Q ss_pred ccCCCCCCCcE
Q psy1434 225 VDLDENQYPDL 235 (357)
Q Consensus 225 ~D~d~DG~~Dl 235 (357)
.|+|+||..++
T Consensus 35 aDvn~Dg~i~i 45 (59)
T d2cclb1 35 ADVDKNGSINA 45 (59)
T ss_dssp HCTTCSSCCSH
T ss_pred cccCCCCCCCH
Confidence 49999998653
No 8
>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}
Probab=12.07 E-value=29 Score=22.78 Aligned_cols=13 Identities=38% Similarity=0.509 Sum_probs=10.7
Q ss_pred eeccCCCCCCcee
Q psy1434 156 NLGDINKDGFGDF 168 (357)
Q Consensus 156 ~~gDiN~DG~~Dl 168 (357)
..||+|+||.-|+
T Consensus 5 l~GDvN~DG~Vd~ 17 (71)
T d1dava_ 5 LYGDVNDDGKVNS 17 (71)
T ss_dssp CBSCSSSSSBSSG
T ss_pred ceeccCCCCCCcH
Confidence 3699999998766
No 9
>d1tg7a1 b.149.1.1 (A:570-666) Beta-galactosidase LacA, domain 3 {Penicillium sp. [TaxId: 5081]}
Probab=5.22 E-value=1.8e+02 Score=20.05 Aligned_cols=22 Identities=36% Similarity=0.447 Sum_probs=15.5
Q ss_pred ceeEEeeccCCCCCCcee-EEcCCC
Q psy1434 151 GLSLCNLGDINKDGFGDF-AVGAPY 174 (357)
Q Consensus 151 G~sva~~gDiN~DG~~Dl-~VgaP~ 174 (357)
|..+...||+|+. ..| +++||-
T Consensus 46 g~tL~LtGD~n~t--T~lEV~~aP~ 68 (97)
T d1tg7a1 46 GNDLHIQADFNAT--TPIEVVGAPS 68 (97)
T ss_dssp TTEEEEEEEBSSC--EEEEEESCCT
T ss_pred CCEEEEEeecCCC--ccEEEEecCC
Confidence 3466667999887 456 778874
No 10
>d1mxga1 b.71.1.1 (A:362-435) Bacterial alpha-Amylase {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=3.24 E-value=1.8e+02 Score=18.25 Aligned_cols=13 Identities=46% Similarity=0.667 Sum_probs=9.1
Q ss_pred CCCCCcceeeEEE
Q psy1434 27 TDDGSYMGYSVAS 39 (357)
Q Consensus 27 ~~~~sy~G~sva~ 39 (357)
+..+.|+||||=+
T Consensus 57 dpangyygysvws 69 (74)
T d1mxga1 57 DPANGYYGYSVWS 69 (74)
T ss_dssp EGGGTEESEEEEE
T ss_pred CCCcCccceEEEE
Confidence 3457889999743
Done!