Query psy14342
Match_columns 316
No_of_seqs 112 out of 1702
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 17:27:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14342.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14342hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0365 Acs Acyl-coenzyme A sy 100.0 5.5E-48 1.2E-52 355.6 23.5 288 1-304 172-522 (528)
2 KOG1176|consensus 100.0 5.7E-47 1.2E-51 350.5 21.0 292 1-305 185-533 (537)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 2.5E-44 5.4E-49 340.8 23.0 294 1-304 172-527 (534)
4 KOG1177|consensus 100.0 8.4E-45 1.8E-49 317.6 17.9 296 1-308 235-590 (596)
5 PRK05851 long-chain-fatty-acid 100.0 1E-42 2.2E-47 329.9 25.5 302 1-305 153-523 (525)
6 PLN02654 acetate-CoA ligase 100.0 2E-42 4.3E-47 335.9 22.9 298 1-304 276-640 (666)
7 PRK07769 long-chain-fatty-acid 100.0 1E-41 2.2E-46 329.7 27.4 310 1-311 181-621 (631)
8 PLN03051 acyl-activating enzym 100.0 3.1E-41 6.8E-46 317.8 24.8 292 1-304 120-491 (499)
9 PTZ00237 acetyl-CoA synthetase 100.0 3E-41 6.6E-46 326.6 23.8 297 1-305 255-624 (647)
10 TIGR02316 propion_prpE propion 100.0 3.7E-41 8.1E-46 325.5 24.3 300 1-305 233-605 (628)
11 PRK12476 putative fatty-acid-- 100.0 1.3E-40 2.9E-45 320.8 27.3 306 1-308 194-610 (612)
12 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1E-40 2.2E-45 323.3 25.0 296 1-306 265-628 (652)
13 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.1E-40 2.3E-45 322.4 22.8 300 1-304 237-602 (625)
14 PRK06334 long chain fatty acid 100.0 2.5E-40 5.4E-45 314.4 23.5 291 1-303 184-534 (539)
15 PRK03584 acetoacetyl-CoA synth 100.0 3.9E-40 8.4E-45 319.9 24.8 299 1-308 264-629 (655)
16 KOG1175|consensus 100.0 2.7E-40 5.9E-45 305.8 19.5 299 1-305 240-603 (626)
17 PRK00174 acetyl-CoA synthetase 100.0 7.2E-40 1.6E-44 317.2 23.1 299 1-305 246-611 (637)
18 PLN02736 long-chain acyl-CoA s 100.0 1.7E-40 3.8E-45 322.0 18.3 296 1-312 222-648 (651)
19 PLN02860 o-succinylbenzoate-Co 100.0 2.6E-39 5.6E-44 309.1 25.7 295 1-304 173-554 (563)
20 PRK07445 O-succinylbenzoic aci 100.0 2.9E-39 6.3E-44 300.5 23.5 290 1-304 121-447 (452)
21 PRK07529 AMP-binding domain pr 100.0 5.6E-39 1.2E-43 310.4 25.9 298 1-306 214-572 (632)
22 PRK09192 acyl-CoA synthetase; 100.0 1.4E-38 3.1E-43 304.9 28.0 311 1-315 177-577 (579)
23 PRK04319 acetyl-CoA synthetase 100.0 5.2E-39 1.1E-43 307.4 23.1 292 1-303 206-558 (570)
24 PRK10524 prpE propionyl-CoA sy 100.0 7.4E-39 1.6E-43 309.7 24.2 301 1-305 234-606 (629)
25 PLN03052 acetate--CoA ligase; 100.0 1.1E-38 2.3E-43 311.4 23.6 294 1-304 357-721 (728)
26 PLN02614 long-chain acyl-CoA s 100.0 3.6E-39 7.9E-44 312.8 19.6 302 1-315 224-659 (666)
27 PLN02574 4-coumarate--CoA liga 100.0 1.6E-38 3.4E-43 303.5 23.7 294 1-306 199-556 (560)
28 PRK07788 acyl-CoA synthetase; 100.0 8E-39 1.7E-43 304.9 21.4 286 1-300 208-547 (549)
29 PRK06060 acyl-CoA synthetase; 100.0 1.3E-38 2.9E-43 311.6 23.2 290 1-303 146-491 (705)
30 PRK05852 acyl-CoA synthetase; 100.0 3.6E-38 7.9E-43 299.4 24.3 296 1-304 177-532 (534)
31 PRK08314 long-chain-fatty-acid 100.0 2.1E-38 4.5E-43 301.8 22.6 290 1-304 191-542 (546)
32 PRK08043 bifunctional acyl-[ac 100.0 2.9E-38 6.3E-43 309.5 23.6 291 1-305 366-714 (718)
33 PRK07638 acyl-CoA synthetase; 100.0 8.1E-38 1.8E-42 293.8 24.3 287 1-305 144-482 (487)
34 PRK05857 acyl-CoA synthetase; 100.0 5.3E-38 1.2E-42 298.6 23.1 297 1-306 170-533 (540)
35 PLN02861 long-chain-fatty-acid 100.0 1.7E-38 3.7E-43 308.1 19.8 301 1-314 221-655 (660)
36 PLN02246 4-coumarate--CoA liga 100.0 1.1E-37 2.3E-42 296.4 23.5 296 1-305 180-537 (537)
37 TIGR03443 alpha_am_amid L-amin 100.0 4.3E-38 9.2E-43 328.2 21.6 296 1-300 416-824 (1389)
38 COG1022 FAA1 Long-chain acyl-C 100.0 8.2E-38 1.8E-42 292.1 20.5 301 1-315 192-611 (613)
39 PRK13295 cyclohexanecarboxylat 100.0 4.2E-37 9.1E-42 292.9 24.8 292 1-304 198-544 (547)
40 PRK06839 acyl-CoA synthetase; 100.0 4.3E-37 9.2E-42 289.3 23.9 292 1-304 150-495 (496)
41 TIGR01734 D-ala-DACP-lig D-ala 100.0 3.2E-37 6.9E-42 290.7 23.1 300 1-303 142-501 (502)
42 PRK06155 crotonobetaine/carnit 100.0 3.7E-37 8E-42 293.0 22.6 288 1-304 181-524 (542)
43 PRK05677 long-chain-fatty-acid 100.0 7.6E-37 1.6E-41 292.1 24.2 291 1-304 208-557 (562)
44 PRK07824 O-succinylbenzoic aci 100.0 1.1E-36 2.3E-41 275.4 23.1 280 1-304 36-357 (358)
45 PRK08180 feruloyl-CoA synthase 100.0 3.5E-37 7.5E-42 297.1 20.8 304 1-313 210-604 (614)
46 PRK09274 peptide synthase; Pro 100.0 7E-37 1.5E-41 291.7 22.6 294 1-304 175-548 (552)
47 TIGR03098 ligase_PEP_1 acyl-Co 100.0 7E-37 1.5E-41 289.2 22.0 286 1-300 162-514 (515)
48 PRK07787 acyl-CoA synthetase; 100.0 1.6E-36 3.4E-41 283.9 23.7 284 1-300 129-469 (471)
49 PRK05691 peptide synthase; Val 100.0 9.3E-37 2E-41 341.0 26.0 305 1-308 167-564 (4334)
50 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 6.6E-37 1.4E-41 290.4 21.0 286 1-299 184-527 (527)
51 PRK03640 O-succinylbenzoic aci 100.0 1E-36 2.2E-41 285.9 22.0 290 1-304 142-482 (483)
52 PRK09029 O-succinylbenzoic aci 100.0 2.2E-36 4.7E-41 282.0 23.9 280 1-304 136-453 (458)
53 PRK07867 acyl-CoA synthetase; 100.0 1.9E-36 4.2E-41 287.1 23.6 294 1-310 153-513 (529)
54 PRK13388 acyl-CoA synthetase; 100.0 2.2E-36 4.8E-41 287.5 23.7 289 1-305 151-507 (540)
55 PRK06145 acyl-CoA synthetase; 100.0 2.1E-36 4.6E-41 284.8 23.4 291 1-303 150-496 (497)
56 PRK12467 peptide synthase; Pro 100.0 2.4E-37 5.3E-42 343.2 19.1 296 1-304 3238-3594(3956)
57 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3E-36 6.6E-41 286.5 23.4 287 1-299 196-537 (538)
58 PRK05620 long-chain-fatty-acid 100.0 4.6E-36 9.9E-41 287.5 24.5 301 1-310 182-563 (576)
59 PRK08279 long-chain-acyl-CoA s 100.0 2.4E-36 5.3E-41 290.7 22.6 290 1-305 200-565 (600)
60 PRK05850 acyl-CoA synthetase; 100.0 1E-35 2.3E-40 285.2 26.8 305 1-309 161-573 (578)
61 PRK10946 entE enterobactin syn 100.0 5.5E-36 1.2E-40 284.6 24.3 290 1-304 183-532 (536)
62 PRK08633 2-acyl-glycerophospho 100.0 1.4E-36 3.1E-41 311.9 22.0 294 1-303 783-1142(1146)
63 PRK05605 long-chain-fatty-acid 100.0 4E-36 8.7E-41 287.7 23.4 291 1-304 220-569 (573)
64 PRK09088 acyl-CoA synthetase; 100.0 6.3E-36 1.4E-40 281.0 24.3 294 1-305 136-486 (488)
65 PRK08316 acyl-CoA synthetase; 100.0 6.5E-36 1.4E-40 283.0 24.2 292 1-304 172-519 (523)
66 PTZ00342 acyl-CoA synthetase; 100.0 1.4E-36 3.1E-41 295.4 19.9 299 1-313 305-745 (746)
67 PRK06188 acyl-CoA synthetase; 100.0 5.1E-36 1.1E-40 284.0 23.1 297 1-308 169-521 (524)
68 PRK06164 acyl-CoA synthetase; 100.0 1E-35 2.2E-40 283.0 25.0 290 1-304 182-532 (540)
69 PRK13382 acyl-CoA synthetase; 100.0 4.5E-36 9.7E-41 285.3 22.1 286 1-300 197-536 (537)
70 PRK07514 malonyl-CoA synthase; 100.0 8.6E-36 1.9E-40 281.1 23.6 288 1-304 157-501 (504)
71 PRK12583 acyl-CoA synthetase; 100.0 1.3E-35 2.9E-40 283.2 24.7 294 1-304 202-552 (558)
72 PRK10252 entF enterobactin syn 100.0 5.3E-36 1.2E-40 311.0 23.1 294 1-301 599-964 (1296)
73 PRK07768 long-chain-fatty-acid 100.0 2.3E-35 5E-40 280.9 25.6 302 1-303 153-544 (545)
74 PRK07470 acyl-CoA synthetase; 100.0 1.1E-35 2.5E-40 281.9 23.4 299 1-308 164-522 (528)
75 PRK08008 caiC putative crotono 100.0 6.2E-36 1.3E-40 283.0 21.3 286 1-299 174-517 (517)
76 PRK08308 acyl-CoA synthetase; 100.0 1.4E-35 3.1E-40 273.1 23.2 276 1-299 102-408 (414)
77 PRK07656 long-chain-fatty-acid 100.0 7.9E-36 1.7E-40 281.8 21.4 289 1-300 167-512 (513)
78 PRK06814 acylglycerophosphoeth 100.0 9.8E-36 2.1E-40 305.5 23.8 290 1-304 794-1132(1140)
79 PRK04813 D-alanine--poly(phosp 100.0 2.2E-35 4.8E-40 278.1 24.2 297 1-303 144-502 (503)
80 COG1021 EntE Peptide arylation 100.0 7.2E-37 1.6E-41 262.6 12.3 285 1-304 190-538 (542)
81 PRK12316 peptide synthase; Pro 100.0 3.2E-36 7E-41 339.0 21.2 293 1-303 656-1005(5163)
82 PRK12492 long-chain-fatty-acid 100.0 1.5E-35 3.2E-40 283.2 22.4 289 1-301 208-561 (562)
83 PRK07008 long-chain-fatty-acid 100.0 2.2E-35 4.8E-40 280.7 23.2 296 1-305 177-534 (539)
84 PLN02387 long-chain-fatty-acid 100.0 5.5E-36 1.2E-40 291.9 19.5 303 1-312 251-696 (696)
85 PRK08315 AMP-binding domain pr 100.0 1.8E-35 4E-40 282.3 22.5 294 1-304 200-551 (559)
86 PRK07786 long-chain-fatty-acid 100.0 1.1E-35 2.4E-40 282.9 20.8 298 1-309 175-529 (542)
87 PLN02330 4-coumarate--CoA liga 100.0 1.9E-35 4.2E-40 281.5 22.1 292 1-304 185-541 (546)
88 PRK12467 peptide synthase; Pro 100.0 3.2E-36 7E-41 334.3 18.7 300 1-303 1719-2084(3956)
89 PRK12316 peptide synthase; Pro 100.0 4.4E-36 9.6E-41 337.9 20.1 300 1-304 4695-5060(5163)
90 PLN03102 acyl-activating enzym 100.0 2.9E-35 6.3E-40 281.9 22.6 294 1-304 187-554 (579)
91 PLN02430 long-chain-fatty-acid 100.0 1.7E-35 3.6E-40 286.9 21.1 302 1-314 221-655 (660)
92 PRK06178 acyl-CoA synthetase; 100.0 2.8E-35 6E-40 281.6 22.4 294 1-304 210-565 (567)
93 PRK06087 short chain acyl-CoA 100.0 2.4E-35 5.2E-40 280.9 21.4 293 1-304 188-536 (547)
94 PRK12582 acyl-CoA synthetase; 100.0 3.5E-35 7.5E-40 283.8 21.6 305 1-313 221-615 (624)
95 PRK05691 peptide synthase; Val 100.0 1.8E-35 3.9E-40 330.7 22.3 297 1-301 3870-4225(4334)
96 TIGR01923 menE O-succinylbenzo 100.0 6.4E-35 1.4E-39 270.3 20.8 280 1-298 112-436 (436)
97 PRK06710 long-chain-fatty-acid 100.0 1.3E-34 2.8E-39 276.8 23.0 292 1-305 207-556 (563)
98 PRK08751 putative long-chain f 100.0 1E-34 2.2E-39 277.3 22.0 289 1-301 209-557 (560)
99 PRK13390 acyl-CoA synthetase; 100.0 6.2E-35 1.3E-39 275.2 20.1 283 2-299 150-501 (501)
100 PRK06187 long-chain-fatty-acid 100.0 2.7E-34 5.8E-39 271.7 24.2 296 1-306 168-521 (521)
101 PRK06018 putative acyl-CoA syn 100.0 3.9E-34 8.4E-39 272.3 23.9 298 1-307 178-537 (542)
102 PRK07059 Long-chain-fatty-acid 100.0 2E-34 4.3E-39 275.2 21.9 289 1-301 205-555 (557)
103 TIGR02262 benz_CoA_lig benzoat 100.0 2.1E-34 4.6E-39 272.0 21.7 287 1-300 162-507 (508)
104 PTZ00216 acyl-CoA synthetase; 100.0 8.2E-35 1.8E-39 284.1 19.1 297 1-312 265-698 (700)
105 PRK12406 long-chain-fatty-acid 100.0 1.5E-33 3.2E-38 266.4 25.8 290 1-304 153-503 (509)
106 PRK08276 long-chain-fatty-acid 100.0 6.3E-34 1.4E-38 268.4 20.5 291 1-306 141-498 (502)
107 PRK08974 long-chain-fatty-acid 100.0 1.1E-33 2.3E-38 270.3 22.2 292 1-304 207-555 (560)
108 PRK13383 acyl-CoA synthetase; 100.0 2.8E-33 6E-38 264.9 23.3 284 2-299 176-515 (516)
109 TIGR03205 pimA dicarboxylate-- 100.0 2.1E-33 4.5E-38 267.2 22.2 285 1-299 193-541 (541)
110 PLN02479 acetate-CoA ligase 100.0 5.2E-33 1.1E-37 265.9 24.8 295 1-306 196-560 (567)
111 PRK13391 acyl-CoA synthetase; 100.0 4.1E-33 8.9E-38 263.4 21.9 289 2-304 156-509 (511)
112 PRK08162 acyl-CoA synthetase; 100.0 1E-32 2.2E-37 262.7 24.0 293 1-304 183-539 (545)
113 PRK07798 acyl-CoA synthetase; 100.0 1.6E-32 3.4E-37 260.4 24.2 291 1-304 164-532 (533)
114 TIGR02372 4_coum_CoA_lig 4-cou 100.0 9.5E-32 2.1E-36 243.7 21.7 265 2-294 97-386 (386)
115 KOG1256|consensus 100.0 2.2E-32 4.8E-37 253.0 17.1 300 1-314 256-689 (691)
116 PRK07868 acyl-CoA synthetase; 100.0 1.7E-31 3.8E-36 268.7 21.9 286 1-304 607-958 (994)
117 KOG1180|consensus 100.0 1.2E-31 2.5E-36 239.0 10.7 304 1-313 238-677 (678)
118 TIGR01733 AA-adenyl-dom amino 100.0 2.1E-28 4.6E-33 224.6 15.0 231 1-235 121-408 (408)
119 KOG1179|consensus 100.0 2.6E-28 5.6E-33 218.4 12.5 292 1-301 243-610 (649)
120 PTZ00297 pantothenate kinase; 100.0 1.4E-27 2.9E-32 242.4 19.2 293 1-314 599-1004(1452)
121 TIGR02155 PA_CoA_ligase phenyl 99.9 5.9E-26 1.3E-30 209.6 24.2 280 2-296 77-418 (422)
122 PF00501 AMP-binding: AMP-bind 99.9 1.7E-24 3.7E-29 199.4 10.3 204 1-210 156-417 (417)
123 KOG3628|consensus 99.9 4.8E-21 1E-25 182.2 24.3 314 2-316 945-1363(1363)
124 TIGR03335 F390_ftsA coenzyme F 99.9 1.1E-20 2.5E-25 175.1 23.8 276 1-295 87-440 (445)
125 COG1020 EntF Non-ribosomal pep 99.8 9E-19 2E-23 170.2 14.8 220 1-228 367-642 (642)
126 COG1541 PaaK Coenzyme F390 syn 99.8 1.4E-16 3E-21 142.6 23.2 272 2-295 92-430 (438)
127 KOG1178|consensus 99.7 5.2E-17 1.1E-21 158.6 13.0 293 2-300 198-575 (1032)
128 PRK09188 serine/threonine prot 99.4 8.2E-13 1.8E-17 118.2 10.3 103 189-304 213-328 (365)
129 TIGR03089 conserved hypothetic 99.1 3E-10 6.4E-15 95.9 7.4 77 1-95 151-227 (227)
130 TIGR02304 aden_form_hyp probab 99.0 1.5E-07 3.2E-12 86.5 22.1 255 4-280 103-407 (430)
131 PF13193 AMP-binding_C: AMP-bi 99.0 1E-09 2.3E-14 75.3 5.5 67 218-292 1-73 (73)
132 PF14535 AMP-binding_C_2: AMP- 98.6 2.4E-07 5.3E-12 67.0 6.7 82 211-295 1-91 (96)
133 KOG3628|consensus 98.5 4E-06 8.6E-11 82.0 16.5 311 2-315 252-715 (1363)
134 PF04443 LuxE: Acyl-protein sy 95.2 0.51 1.1E-05 42.8 12.7 35 2-36 91-125 (365)
135 PF09580 Spore_YhcN_YlaJ: Spor 80.9 10 0.00022 30.4 7.7 55 215-270 76-130 (177)
136 PF03321 GH3: GH3 auxin-respon 76.8 2.1 4.7E-05 40.9 2.9 67 200-266 392-467 (528)
137 PF00501 AMP-binding: AMP-bind 71.7 28 0.0006 31.7 8.9 77 18-99 20-99 (417)
138 PTZ00237 acetyl-CoA synthetase 69.2 71 0.0015 31.5 11.6 79 18-101 91-172 (647)
139 PRK09274 peptide synthase; Pro 67.3 49 0.0011 31.6 9.9 78 18-100 40-120 (552)
140 PLN03102 acyl-activating enzym 67.1 52 0.0011 31.8 10.0 80 19-103 39-121 (579)
141 PRK08008 caiC putative crotono 66.7 56 0.0012 30.8 10.1 81 19-104 37-120 (517)
142 PRK07788 acyl-CoA synthetase; 66.3 46 0.00099 31.8 9.5 81 19-104 74-157 (549)
143 PLN02247 indole-3-acetic acid- 65.3 8.1 0.00017 37.5 3.9 27 200-226 438-464 (606)
144 PRK13295 cyclohexanecarboxylat 65.0 50 0.0011 31.5 9.5 82 15-101 51-135 (547)
145 PLN02654 acetate-CoA ligase 64.8 96 0.0021 30.7 11.5 80 18-102 119-201 (666)
146 PLN03052 acetate--CoA ligase; 64.5 97 0.0021 31.1 11.6 80 18-102 207-289 (728)
147 PLN02736 long-chain acyl-CoA s 64.4 47 0.001 32.7 9.3 82 18-104 77-161 (651)
148 PLN02246 4-coumarate--CoA liga 64.0 56 0.0012 31.1 9.5 81 18-103 49-132 (537)
149 TIGR02316 propion_prpE propion 63.5 1E+02 0.0022 30.1 11.5 79 18-101 82-163 (628)
150 PRK10524 prpE propionyl-CoA sy 63.5 95 0.0021 30.3 11.2 79 18-101 83-164 (629)
151 PRK06334 long chain fatty acid 63.2 35 0.00075 32.6 8.0 79 19-102 45-123 (539)
152 PLN02860 o-succinylbenzoate-Co 63.1 48 0.001 31.8 9.0 79 19-102 32-113 (563)
153 TIGR02188 Ac_CoA_lig_AcsA acet 63.1 1E+02 0.0022 30.0 11.3 81 17-102 86-169 (625)
154 PRK05677 long-chain-fatty-acid 62.4 65 0.0014 30.9 9.7 79 19-102 49-131 (562)
155 PLN02249 indole-3-acetic acid- 62.1 6.6 0.00014 38.1 2.8 26 200-225 431-456 (597)
156 PRK08276 long-chain-fatty-acid 62.0 74 0.0016 29.8 9.9 81 19-104 11-94 (502)
157 PRK00174 acetyl-CoA synthetase 61.9 61 0.0013 31.7 9.6 81 17-102 96-179 (637)
158 PRK06187 long-chain-fatty-acid 61.7 68 0.0015 30.0 9.7 80 20-104 32-114 (521)
159 PRK06839 acyl-CoA synthetase; 61.6 67 0.0015 30.0 9.5 81 18-103 26-110 (496)
160 PRK07514 malonyl-CoA synthase; 61.3 70 0.0015 30.0 9.6 82 18-104 27-111 (504)
161 PRK06087 short chain acyl-CoA 61.2 49 0.0011 31.5 8.6 77 19-100 49-128 (547)
162 KOG1177|consensus 61.0 38 0.00083 31.9 7.2 83 17-104 75-160 (596)
163 PRK08751 putative long-chain f 60.8 68 0.0015 30.6 9.6 80 19-103 50-133 (560)
164 TIGR03098 ligase_PEP_1 acyl-Co 60.8 73 0.0016 29.9 9.7 81 19-104 25-108 (515)
165 PRK12492 long-chain-fatty-acid 60.7 62 0.0013 31.0 9.3 79 18-101 48-130 (562)
166 PLN02330 4-coumarate--CoA liga 60.4 60 0.0013 31.0 9.1 81 18-103 54-137 (546)
167 PRK07059 Long-chain-fatty-acid 60.3 71 0.0015 30.5 9.6 80 18-102 47-129 (557)
168 PRK08314 long-chain-fatty-acid 60.3 79 0.0017 30.0 9.9 81 19-104 35-119 (546)
169 PLN02614 long-chain acyl-CoA s 60.1 63 0.0014 32.0 9.3 80 18-102 78-160 (666)
170 PLN02861 long-chain-fatty-acid 59.9 64 0.0014 31.8 9.3 80 18-102 76-158 (660)
171 PRK06155 crotonobetaine/carnit 59.6 72 0.0016 30.5 9.4 81 19-104 46-129 (542)
172 PRK03584 acetoacetyl-CoA synth 59.5 64 0.0014 31.7 9.3 80 18-102 113-195 (655)
173 PF03321 GH3: GH3 auxin-respon 59.5 11 0.00025 36.0 3.9 26 2-27 82-108 (528)
174 TIGR01217 ac_ac_CoA_syn acetoa 59.2 1.3E+02 0.0028 29.7 11.3 80 18-102 113-195 (652)
175 PRK05857 acyl-CoA synthetase; 58.7 61 0.0013 30.9 8.8 80 18-102 40-122 (540)
176 PRK08162 acyl-CoA synthetase; 58.7 77 0.0017 30.1 9.5 81 19-104 43-126 (545)
177 TIGR02898 spore_YhcN_YlaJ spor 58.7 44 0.00096 26.3 6.4 52 216-268 56-109 (158)
178 KOG1176|consensus 58.5 86 0.0019 30.2 9.5 86 17-107 43-133 (537)
179 PRK05605 long-chain-fatty-acid 58.4 72 0.0016 30.6 9.3 80 19-103 57-139 (573)
180 PRK08315 AMP-binding domain pr 58.4 67 0.0015 30.6 9.0 78 19-101 43-123 (559)
181 PRK04319 acetyl-CoA synthetase 57.2 63 0.0014 31.0 8.7 80 18-102 72-154 (570)
182 TIGR01733 AA-adenyl-dom amino 56.5 74 0.0016 28.7 8.7 64 36-104 20-83 (408)
183 PRK09088 acyl-CoA synthetase; 56.3 76 0.0017 29.6 8.9 77 19-100 22-101 (488)
184 PRK06018 putative acyl-CoA syn 56.1 1.1E+02 0.0023 29.2 10.0 82 18-104 38-122 (542)
185 PRK13388 acyl-CoA synthetase; 55.5 99 0.0022 29.5 9.7 79 19-102 26-108 (540)
186 PRK13383 acyl-CoA synthetase; 55.4 1E+02 0.0022 29.1 9.6 80 19-103 60-142 (516)
187 PRK06164 acyl-CoA synthetase; 55.1 72 0.0016 30.3 8.6 79 19-102 35-116 (540)
188 TIGR03443 alpha_am_amid L-amin 54.8 93 0.002 33.8 10.2 78 17-99 268-348 (1389)
189 PRK07656 long-chain-fatty-acid 54.5 1.1E+02 0.0024 28.6 9.7 81 19-104 30-113 (513)
190 PRK06178 acyl-CoA synthetase; 54.0 1.1E+02 0.0023 29.4 9.7 81 19-104 58-141 (567)
191 COG0365 Acs Acyl-coenzyme A sy 54.0 2.1E+02 0.0045 27.6 11.2 94 3-105 27-124 (528)
192 PRK08316 acyl-CoA synthetase; 53.0 1.2E+02 0.0026 28.4 9.8 82 18-104 35-119 (523)
193 PRK12582 acyl-CoA synthetase; 52.8 89 0.0019 30.5 9.0 81 18-100 79-164 (624)
194 PRK07470 acyl-CoA synthetase; 52.8 1.2E+02 0.0026 28.7 9.7 80 19-103 32-114 (528)
195 PRK12476 putative fatty-acid-- 51.9 1.1E+02 0.0025 29.7 9.5 83 18-102 67-151 (612)
196 PLN02387 long-chain-fatty-acid 51.8 1.2E+02 0.0026 30.2 9.8 82 18-104 105-189 (696)
197 COG0318 CaiC Acyl-CoA syntheta 51.6 1.9E+02 0.004 27.7 10.8 79 19-102 38-119 (534)
198 PRK08279 long-chain-acyl-CoA s 51.4 1.1E+02 0.0025 29.5 9.4 80 19-103 62-144 (600)
199 PRK12583 acyl-CoA synthetase; 51.1 1.1E+02 0.0024 29.0 9.3 79 19-102 45-126 (558)
200 PRK08180 feruloyl-CoA synthase 51.0 99 0.0021 30.1 9.0 81 18-100 68-153 (614)
201 PRK07529 AMP-binding domain pr 50.8 1.7E+02 0.0036 28.7 10.5 81 16-102 55-138 (632)
202 PRK12406 long-chain-fatty-acid 49.8 1.2E+02 0.0027 28.4 9.3 81 19-104 11-94 (509)
203 PLN02430 long-chain-fatty-acid 49.5 1.2E+02 0.0026 30.0 9.3 79 19-102 76-157 (660)
204 PRK08974 long-chain-fatty-acid 49.5 1.2E+02 0.0027 28.9 9.3 80 19-103 48-131 (560)
205 PRK07798 acyl-CoA synthetase; 49.1 1.4E+02 0.0031 28.0 9.6 79 19-102 28-109 (533)
206 TIGR01923 menE O-succinylbenzo 49.0 1.2E+02 0.0025 27.8 8.8 63 35-102 18-80 (436)
207 PRK05850 acyl-CoA synthetase; 48.9 1.3E+02 0.0029 28.8 9.5 84 18-104 34-120 (578)
208 PRK04813 D-alanine--poly(phosp 48.9 1.1E+02 0.0023 28.6 8.6 78 19-101 27-107 (503)
209 TIGR02262 benz_CoA_lig benzoat 48.5 1.6E+02 0.0034 27.7 9.7 80 19-103 30-112 (508)
210 PRK07008 long-chain-fatty-acid 48.3 1.2E+02 0.0025 29.0 8.9 80 19-103 39-121 (539)
211 PRK06710 long-chain-fatty-acid 47.2 1.3E+02 0.0029 28.7 9.2 79 19-102 49-130 (563)
212 PRK06060 acyl-CoA synthetase; 47.0 1.1E+02 0.0025 30.3 8.8 77 19-100 30-109 (705)
213 PRK09029 O-succinylbenzoic aci 46.9 1.4E+02 0.003 27.7 8.9 77 19-100 28-107 (458)
214 TIGR03205 pimA dicarboxylate-- 45.7 1.6E+02 0.0034 28.0 9.4 77 19-100 46-125 (541)
215 PHA02553 6 baseplate wedge sub 45.5 47 0.001 32.3 5.5 69 200-268 301-376 (611)
216 PRK03640 O-succinylbenzoic aci 45.4 1.5E+02 0.0032 27.6 8.9 78 19-101 27-107 (483)
217 PF01037 AsnC_trans_reg: AsnC 45.4 84 0.0018 20.4 6.8 54 214-272 10-63 (74)
218 PRK06188 acyl-CoA synthetase; 45.3 1.4E+02 0.003 28.2 8.8 79 19-102 37-118 (524)
219 TIGR02275 DHB_AMP_lig 2,3-dihy 45.0 1.3E+02 0.0027 28.6 8.5 77 19-100 48-127 (527)
220 PRK05852 acyl-CoA synthetase; 44.7 1.2E+02 0.0027 28.7 8.4 76 19-99 43-121 (534)
221 PLN02479 acetate-CoA ligase 44.7 1.5E+02 0.0032 28.5 9.0 80 19-103 45-127 (567)
222 PLN02620 indole-3-acetic acid- 44.5 18 0.00038 35.2 2.5 28 200-227 444-471 (612)
223 PRK13390 acyl-CoA synthetase; 44.3 1.5E+02 0.0033 27.7 8.9 77 19-100 24-103 (501)
224 PRK07786 long-chain-fatty-acid 43.8 1.4E+02 0.0031 28.4 8.7 79 19-102 42-123 (542)
225 PRK09192 acyl-CoA synthetase; 43.8 1.8E+02 0.0038 28.0 9.4 84 17-102 47-137 (579)
226 PRK05620 long-chain-fatty-acid 41.5 2.5E+02 0.0053 27.0 10.0 82 18-104 37-122 (576)
227 PLN02574 4-coumarate--CoA liga 41.4 1.8E+02 0.0039 27.8 9.0 79 19-102 66-148 (560)
228 COG0777 AccD Acetyl-CoA carbox 41.2 1.9E+02 0.0041 25.1 7.8 46 202-249 82-130 (294)
229 PRK13391 acyl-CoA synthetase; 40.7 2.5E+02 0.0053 26.4 9.8 80 19-103 24-106 (511)
230 PRK08308 acyl-CoA synthetase; 40.7 2E+02 0.0044 26.1 9.0 77 19-100 8-86 (414)
231 TIGR03208 cyc_hxne_CoA_lg cycl 40.4 1.9E+02 0.0042 27.4 9.1 79 18-101 52-133 (538)
232 PRK13382 acyl-CoA synthetase; 40.4 2E+02 0.0044 27.3 9.1 79 19-102 68-149 (537)
233 TIGR01734 D-ala-DACP-lig D-ala 39.4 1.9E+02 0.0041 27.0 8.7 78 19-101 25-105 (502)
234 PTZ00216 acyl-CoA synthetase; 38.9 2.4E+02 0.0053 28.0 9.7 81 17-102 119-202 (700)
235 PF00403 HMA: Heavy-metal-asso 38.9 67 0.0015 20.2 4.0 31 215-246 12-42 (62)
236 PRK07787 acyl-CoA synthetase; 35.5 2.5E+02 0.0054 26.0 8.8 76 19-101 25-100 (471)
237 PRK07769 long-chain-fatty-acid 34.2 3E+02 0.0064 26.9 9.4 82 18-102 54-138 (631)
238 PF04784 DUF547: Protein of un 33.1 37 0.0008 25.2 2.2 22 205-226 50-71 (117)
239 PRK07867 acyl-CoA synthetase; 32.8 2.8E+02 0.0061 26.3 8.8 79 19-102 28-110 (529)
240 PRK10252 entF enterobactin syn 32.7 2.1E+02 0.0046 30.7 8.7 79 19-102 483-564 (1296)
241 PF04865 Baseplate_J: Baseplat 30.5 1.8E+02 0.004 24.4 6.4 66 200-266 105-173 (243)
242 PTZ00342 acyl-CoA synthetase; 30.4 3.3E+02 0.0072 27.5 9.1 82 18-104 90-188 (746)
243 PF07538 ChW: Clostridial hydr 29.7 33 0.00071 19.5 1.1 11 8-18 16-26 (36)
244 TIGR03089 conserved hypothetic 29.5 2.6E+02 0.0056 23.3 7.0 55 18-74 26-84 (227)
245 PRK06145 acyl-CoA synthetase; 29.1 3.6E+02 0.0078 25.1 8.8 78 19-101 27-107 (497)
246 PRK08043 bifunctional acyl-[ac 28.7 2.2E+02 0.0048 28.4 7.6 78 19-101 231-310 (718)
247 PRK07638 acyl-CoA synthetase; 26.1 4.4E+02 0.0095 24.5 8.8 78 19-101 26-105 (487)
248 smart00728 ChW Clostridial hyd 25.4 38 0.00083 20.5 0.9 11 8-18 17-27 (46)
249 PRK08633 2-acyl-glycerophospho 25.0 3.3E+02 0.007 28.8 8.4 79 19-102 641-721 (1146)
250 PF08002 DUF1697: Protein of u 25.0 3E+02 0.0064 21.0 6.0 61 207-274 11-72 (137)
251 COG1167 ARO8 Transcriptional r 24.9 3.9E+02 0.0085 25.1 8.0 87 11-104 151-237 (459)
252 PRK07868 acyl-CoA synthetase; 22.1 5.7E+02 0.012 26.9 9.3 77 19-103 472-551 (994)
253 PF01514 YscJ_FliF: Secretory 21.6 4E+02 0.0088 21.9 6.6 66 214-281 115-193 (206)
No 1
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=5.5e-48 Score=355.59 Aligned_cols=288 Identities=20% Similarity=0.168 Sum_probs=232.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHH-HHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLC-RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~-~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
||++|+|||||||+||||+|+|+.+.... ......|.+.++|+++...++.|.+|.++.++.+|.+|+++++++...+.
T Consensus 172 dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~ 251 (528)
T COG0365 172 DPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFY 251 (528)
T ss_pred CeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCC
Confidence 68999999999999999999999665544 45556788889999999999999999999999999999999999888777
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc-------------------------cccccccch
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC-------------------------ELYPSRHIA 134 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~-------------------------e~~~~yG~t 134 (316)
+|.+++++++++++++++++|+.++.+..... . ++.++|+ .+.+.||+|
T Consensus 252 -~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~-~----~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqT 325 (528)
T COG0365 252 -SPERLWEALEKYKVTIFGTSPTFLRRLMKLGL-G----EPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQT 325 (528)
T ss_pred -CHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC-c----ccccchhheeeeccCCCCCHHHHHHHHHHhCCCEecccccc
Confidence 89999999999999999999999887765543 1 2233333 188999999
Q ss_pred hccCCCCCCCceEEEEeeeccCcccccCCCce-EEecC----------ceEEecC-----CCcccCCCcCC---------
Q psy14342 135 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNP----------ALWLSAV-----SQYRVRDTFCS--------- 189 (316)
Q Consensus 135 e~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~----------~l~v~~~-----~gY~~~~~~~~--------- 189 (316)
|++.......| ....|..+.|+||++ .++|+ +|.++.+ .+||++++.+.
T Consensus 326 Etg~~~~~~~~------~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~ 399 (528)
T COG0365 326 ETGMGFIAGRP------PVKNGSSGLPLPGYAVRRVDDEGNPVPPGVGELVVRLPWPGMALTYWNDPERYKEAYFGRWYR 399 (528)
T ss_pred ccCccccCCCC------CcCCCCCCCCCCCceeEEECCCCCcCCCCceEEEEeCCCchhhhhhhCCHHHHHHHHhhceee
Confidence 99854433322 122333366899999 88886 3888877 79999985543
Q ss_pred -CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchH
Q psy14342 190 -CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLV 259 (316)
Q Consensus 190 -~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~ 259 (316)
+|.+++|+ |. +||+||+||+.|++|+|.|||++|.+ ||.|.||+|++.+ +.+.++|+++++-... +|.
T Consensus 400 tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~-hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~-~L~ 477 (528)
T COG0365 400 TGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLA-HPAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPN-ELA 477 (528)
T ss_pred cCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHh-CcceeeeEEEeccCCCCCcEEEEEEEecCCCChH-HHH
Confidence 36666654 44 99999999999999999999999999 9999999999994 3577788888765444 888
Q ss_pred HHHHHHHHHhcCe--eecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 260 PLVTNAVLEEHHL--IVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 260 ~~~~~~l~~~~~~--~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++++++++.... .++.+.|++ .||+|.+|||.|++||+.+.+
T Consensus 478 ~ei~~~vr~~~~~~~~p~~i~fv~--~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 478 EEIRRHVARNIGPHAIPRKIRFVD--ELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred HHHHHHHHhccCcccCCceEEEec--CCCCCCcccHHHHHHHHHHhh
Confidence 8888888655443 345677776 999999999999999998874
No 2
>KOG1176|consensus
Probab=100.00 E-value=5.7e-47 Score=350.53 Aligned_cols=292 Identities=18% Similarity=0.187 Sum_probs=226.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|++.|+|||||||.||||++||+++..+..+....+.....|+.++.+|++|.+|+...++..+..|++++..+..
T Consensus 185 d~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f---- 260 (537)
T KOG1176|consen 185 DTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKF---- 260 (537)
T ss_pred CeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCC----
Confidence 6899999999999999999999999998777777777777899999999999999999444455555555554432
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhccccc---ccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMK---LAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~---ls~------------------e~~~~yG~te~~~~ 139 (316)
++..+++.+++|++|+++..|+.+..+...+...+....++. ..+ .+.+.||+||+++.
T Consensus 261 ~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~ 340 (537)
T KOG1176|consen 261 DAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGL 340 (537)
T ss_pred CHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCc
Confidence 688999999999999999999998877766522111111111 111 18889999999865
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC-----------Cce
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC-----------NGA 193 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~-----------d~g 193 (316)
.+.+... .. ...+..|.+++|.+ ++.++. ||+||+ .|||+||++|.. |.|
T Consensus 341 ~~~~~~~---~e-~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiG 416 (537)
T KOG1176|consen 341 ITSNDWG---PE-RKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLG 416 (537)
T ss_pred eeecCCC---cc-CcccccCccccceEEEeeCCCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceE
Confidence 5433310 01 23344455788887 444332 999999 999999998763 445
Q ss_pred eeecCc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee-----CCcEEEEEEecCC-chhhcchHHHHH
Q psy14342 194 LYQGAE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGN-ESEALDLVPLVT 263 (316)
Q Consensus 194 ~~~~g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~-----~~~~~~~v~~~~~-~~~~~~l~~~~~ 263 (316)
++|+.+ ++|.+|+||.+|++|+|.|||++|.+ ||.|.||+||+. ||.++++|+.+++ ..+.+++.+.++
T Consensus 417 y~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~-hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~ 495 (537)
T KOG1176|consen 417 YFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLT-HPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVR 495 (537)
T ss_pred EEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHh-CCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHH
Confidence 554432 99999999999999999999999999 999999999999 4578888888763 345579999999
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
+++.. ++.+ ..+.|++ +||+|++|||+|+.||+.+...
T Consensus 496 k~l~~-y~~~-~~V~Fvd--~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 496 KKLPA-YKLP-GGVVFVD--ELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred hhCCh-hhcc-CeEEEec--cCCCCCcchHHHHHHHHHHHhc
Confidence 99994 5555 6888988 8999999999999999998863
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-44 Score=340.78 Aligned_cols=294 Identities=19% Similarity=0.219 Sum_probs=231.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc--CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE--LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
|+++|+|||||||.||||++||+++..+...+...++ +.+.|++++++|++|++|+...++.+++.|+++++..+..|
T Consensus 172 d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f 251 (534)
T COG0318 172 DLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPF 251 (534)
T ss_pred CEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCc
Confidence 6899999999999999999999999999999989898 88999999999999999999977777999999999875433
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhh----cccccccc------------------cccccccchhc
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSL----CRSMKLAC------------------ELYPSRHIALC 136 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~----~~~~~ls~------------------e~~~~yG~te~ 136 (316)
++..++..+.++++++++.+|+++..+.......... .+.+..++ .+.+.||+||+
T Consensus 252 --~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~ 329 (534)
T COG0318 252 --DPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTET 329 (534)
T ss_pred --CHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeeccccc
Confidence 6778889999999999999999988765544332211 11111111 17789999999
Q ss_pred cCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC-----------
Q psy14342 137 LDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC----------- 190 (316)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~----------- 190 (316)
+.....+.+... ....+..|.++||++ +++|++ |+++|| .|||++++.+..
T Consensus 330 ~~~~~~~~~~~~---~~~~~~~G~~~pg~~v~Ivd~~~~~~~pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TG 406 (534)
T COG0318 330 SPVVTINPPDDL---LAKPGSVGRPLPGVEVRIVDPDGGEVLPGEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTG 406 (534)
T ss_pred CceeecCCCchh---hhcCCcccccCCCcEEEEEeCCCCccCCCCceEEEEECchhhhhhcCChHHHHHhhccCCeeeec
Confidence 865544432110 112233356899999 998843 999999 999999776543
Q ss_pred Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch---hhcch
Q psy14342 191 NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES---EALDL 258 (316)
Q Consensus 191 d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~---~~~~l 258 (316)
|.|++++ |. +||.||+|+.+|+||+|.|||++|.+ ||.|.+++|++++ +.++++++.++... +.+++
T Consensus 407 Dlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~-~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i 485 (534)
T COG0318 407 DLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAE-HPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAELTAEEL 485 (534)
T ss_pred ceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHh-CCCcceEEEEeCCCCccCceEEEEEEEcCCCCCCCCHHHH
Confidence 4444444 33 99999999999999999999999999 9999999999994 57888888876522 55778
Q ss_pred HHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 259 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 259 ~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+.++..+. .++.| ..+.+++ .||+|++||++|++|++.+.+
T Consensus 486 ~~~~~~~l~-~~~~P-~~v~~v~--~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 486 RAFLRKRLA-LYKVP-RIVVFVD--ELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred HHHHHhhhh-cccCC-eEEEEeC--CCCCCCchhhhHHHHHHHHHh
Confidence 888888776 55555 4566664 999999999999999999887
No 4
>KOG1177|consensus
Probab=100.00 E-value=8.4e-45 Score=317.64 Aligned_cols=296 Identities=17% Similarity=0.160 Sum_probs=231.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|++-|.|||||||.|||+.+||.++++++.+....+++.+.+++....|++|.+|...+.+.++..|+++|++.|..
T Consensus 235 d~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f--- 311 (596)
T KOG1177|consen 235 DAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSF--- 311 (596)
T ss_pred CceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCC---
Confidence 57889999999999999999999999999999999999998899999999999999888999999999999988774
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccc-----cccc-------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSM-----KLAC-------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~-----~ls~-------------e~~~~yG~te~~~~ 139 (316)
+|...++++++++.|.++.+|+++..+.+....... ..++. ..+. ++...||+||+++.
T Consensus 312 ~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v 391 (596)
T KOG1177|consen 312 DPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPV 391 (596)
T ss_pred ChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcc
Confidence 688899999999999999999999877765554210 01111 1111 27789999999854
Q ss_pred CCCCCc-eEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC-----------Cc
Q psy14342 140 YCGLGF-ALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC-----------NG 192 (316)
Q Consensus 140 ~~~~~~-~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~-----------d~ 192 (316)
.....+ +.......+.|+ .+++.+ .++|.+ |++||. .|||++++.+.+ |.
T Consensus 392 ~~~~~~~D~~~~~~ksVG~---~m~h~Ea~iv~~~g~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi 468 (596)
T KOG1177|consen 392 LFMSLLGDPPEERIKSVGH---LMDHYEAAIVDKDGSEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDI 468 (596)
T ss_pred eeeecCCCCHHHHHhhhhh---cccccccccccCCCCccccCCCceEEEEechhheeecCCcccchhhcccccceecCce
Confidence 322221 000011122233 677888 777644 999999 899998776644 44
Q ss_pred eeeecCc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch---hhcchHH
Q psy14342 193 ALYQGAE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES---EALDLVP 260 (316)
Q Consensus 193 g~~~~g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~---~~~~l~~ 260 (316)
|.+++.+ +||.||+|+.+|++|+|.|||+.|.. ||.|.++.|+|++ +.+++++.+..... ..++|.+
T Consensus 469 ~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~-hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~~t~E~lKa 547 (596)
T KOG1177|consen 469 AVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNK-HPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGKTTAETLKA 547 (596)
T ss_pred EEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhh-CCCeeeEEEEccCCCcccceEEEEEEeeccccccccHHHHHH
Confidence 4445543 99999999999999999999999999 9999999999994 46788887765433 4577778
Q ss_pred HHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCC
Q psy14342 261 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 308 (316)
Q Consensus 261 ~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~ 308 (316)
+++.++. .++.| +.+.+++ .+|+|-+|||+|-++|+.+. +.+.
T Consensus 548 ~Ck~kla-HFKiP-ky~vf~~--~FPlT~tGKIqKFeir~~~k-~~l~ 590 (596)
T KOG1177|consen 548 MCKGKLA-HFKIP-KYFVFVD--EFPLTTTGKIQKFEIREMSK-GHLG 590 (596)
T ss_pred HHhcccc-cccCC-cEEEEec--cCcccccccchhHHHHHHHH-hhcc
Confidence 7877755 66666 5666666 79999999999999999988 4544
No 5
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1e-42 Score=329.89 Aligned_cols=302 Identities=19% Similarity=0.139 Sum_probs=220.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCC-CCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELY-PSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~-~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||++||+++...+..+...+++. ++|+++.++|++|++|++. ++.++..|+++++.++..+.
T Consensus 153 d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~~~~ 231 (525)
T PRK05851 153 GPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAF-LLTAALAGAPLWLAPTTAFS 231 (525)
T ss_pred CeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHH-HHHHHHcCCeEEEcCHHHHH
Confidence 589999999999999999999999999988888889998 8999999999999999976 78999999999987654455
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHh-hHHhhh----hhcccccccc-----------------------cccccc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKM-SHAAVT----SLCRSMKLAC-----------------------ELYPSR 131 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~-~~~~~~----~~~~~~~ls~-----------------------e~~~~y 131 (316)
.+|..|++.+++++++++ .+|+.+..+.. ...... ...+.+-.++ .+++.|
T Consensus 232 ~~~~~~~~~i~~~~~t~~-~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~Y 310 (525)
T PRK05851 232 ASPFRWLSWLSDSRATLT-AAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSY 310 (525)
T ss_pred HCHHHHHHHHHHhCCeEE-eCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhccccc
Confidence 578889999999999965 55655443321 111000 0011111111 267889
Q ss_pred cchhccCCCCCCCc----eEEEEe------eeccCcccccCCCce-EEecCc------------eEEecC---CCcccCC
Q psy14342 132 HIALCLDPYCGLGF----ALWVLS------SVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRD 185 (316)
Q Consensus 132 G~te~~~~~~~~~~----~~~~~~------~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~ 185 (316)
|+||++.......+ ...... ....++.|.++||++ +++|++ |+++|+ .|||+++
T Consensus 311 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~ 390 (525)
T PRK05851 311 GLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQA 390 (525)
T ss_pred chhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCC
Confidence 99998643322111 000000 001124456899999 887632 999999 8999987
Q ss_pred CcC------CCCceeeecCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCC
Q psy14342 186 TFC------SCNGALYQGAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN 251 (316)
Q Consensus 186 ~~~------~~d~g~~~~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~ 251 (316)
+.+ ++|.|++++|. +||.||+||++|+||+|.|||++|.+ ||.|.+|+|++++ +...+++.....
T Consensus 391 ~~~~~~~~~TGDl~~~~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~-~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~ 469 (525)
T PRK05851 391 PIDPDDWFPTGDLGYLVDGGLVVCGRAKELITVAGRNIFPTEIERVAAQ-VRGVREGAVVAVGTGEGSARPGLVIAAEFR 469 (525)
T ss_pred ccCCCCceeccceEEEECCEEEEEeecCCEEEECCEEeCHHHHHHHHHh-CCCcccceEEEEEecCCCCceeEEEEEEec
Confidence 643 33777776665 99999999999999999999999999 9999999999873 234444333222
Q ss_pred chhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 252 ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 252 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
..+.+++.+++++++.......+..+.+++.++||+|++||++|++|++.+.++
T Consensus 470 ~~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~~~ 523 (525)
T PRK05851 470 GPDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLEAA 523 (525)
T ss_pred CcchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHHHHHHHHhc
Confidence 233456778888888865434446788887668999999999999999988764
No 6
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2e-42 Score=335.88 Aligned_cols=298 Identities=13% Similarity=0.061 Sum_probs=220.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHH-HHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTS-LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||+|+|++++. ....+...++++++|+++...|+.|..|..+.++.+|..|+++++.++....
T Consensus 276 d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~ 355 (666)
T PLN02654 276 DPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNY 355 (666)
T ss_pred CceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCC
Confidence 689999999999999999999998754 4456677789999999999999999999888789999999999998765555
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhh-h----hhcccccccc--------------------cccccccch
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-T----SLCRSMKLAC--------------------ELYPSRHIA 134 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-~----~~~~~~~ls~--------------------e~~~~yG~t 134 (316)
.+|.+++++++++++|+++.+|+++..+....... . ...+.+-..+ .+.+.||+|
T Consensus 356 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~T 435 (666)
T PLN02654 356 PDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQT 435 (666)
T ss_pred CCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceecccccc
Confidence 67899999999999999999999987665432210 0 0011111111 156789999
Q ss_pred hccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEec--C---CCcccCCCcCCC-------
Q psy14342 135 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSA--V---SQYRVRDTFCSC------- 190 (316)
Q Consensus 135 e~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~--~---~gY~~~~~~~~~------- 190 (316)
|++.......+.. .....|..+.|+||++ +++|++ |++++ | .|||++++.+..
T Consensus 436 E~g~~~~~~~~~~---~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~ 512 (666)
T PLN02654 436 ETGGFMITPLPGA---WPQKPGSATFPFFGVQPVIVDEKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFA 512 (666)
T ss_pred ccCCeeeccCCCC---CCCCCCccCCCCCCceEEEECCCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCC
Confidence 9865332222110 0122344556899999 888764 89998 4 899999865421
Q ss_pred ------Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhh
Q psy14342 191 ------NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEA 255 (316)
Q Consensus 191 ------d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~ 255 (316)
|.|++++ |. +||.||+||++|++|+|.|||++|.+ ||.|.+++|+++. +.+++++++.+.....
T Consensus 513 g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~-~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~ 591 (666)
T PLN02654 513 GYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVS-HPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYS 591 (666)
T ss_pred CEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHh-CCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCC
Confidence 4555543 33 99999999999999999999999999 9999999999983 4677777777653333
Q ss_pred cchHHHHHHHHHHhcCee--ecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 256 LDLVPLVTNAVLEEHHLI--VGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 256 ~~l~~~~~~~l~~~~~~~--~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++.++++..+.+..... +..+.+++ .||+|.+||++|+.|++.+..
T Consensus 592 ~~l~~~l~~~~~~~L~~~~~P~~i~~v~--~lP~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 592 EELRKSLILTVRNQIGAFAAPDKIHWAP--GLPKTRSGKIMRRILRKIASR 640 (666)
T ss_pred HHHHHHHHHHHHHhCCCCcCCCEEEECC--CCCCCCCcCchHHHHHHHHcC
Confidence 345555555555443332 24555554 899999999999999998764
No 7
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-41 Score=329.73 Aligned_cols=310 Identities=18% Similarity=0.228 Sum_probs=227.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||||++||+++...+......+++.++|+++.++|++|++|++. ++.+++.|+++++..+..+..
T Consensus 181 d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~-~~~~~~~G~~~~~~~~~~~~~ 259 (631)
T PRK07769 181 TIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLIT-VLLPALLGHYITFMSPAAFVR 259 (631)
T ss_pred CeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHH-HHHHHhhCCeEEEEChHHHHh
Confidence 5899999999999999999999999988888888888999999999999999999987 566778899999987755556
Q ss_pred ChHHHHHHHhccce---eeEEecccchhhHHhh---HHh----hh-hhcccccccc-----------------------c
Q psy14342 81 NPALWLSAVSQYRV---RDTFCSYGMLAGIKMS---HAA----VT-SLCRSMKLAC-----------------------E 126 (316)
Q Consensus 81 ~~~~~~~~~~~~~~---t~~~~~~~~~~~l~~~---~~~----~~-~~~~~~~ls~-----------------------e 126 (316)
+|..|++.++++++ +++...|+++..+... ... .. ...+.+-..+ .
T Consensus 260 ~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~ 339 (631)
T PRK07769 260 RPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTA 339 (631)
T ss_pred CHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhh
Confidence 88999999999886 6677777766543321 100 00 0001111111 1
Q ss_pred ccccccchhccCCCCCCCc--eEE---EEe-----------------eeccCcccccCCCce-EEecCc-----------
Q psy14342 127 LYPSRHIALCLDPYCGLGF--ALW---VLS-----------------SVYSGHHSILIPPSE-VEVNPA----------- 172 (316)
Q Consensus 127 ~~~~yG~te~~~~~~~~~~--~~~---~~~-----------------~~~~g~~~~~~~g~~-~i~d~~----------- 172 (316)
+++.||+||++........ ... ... ....++.|.+++|.+ +++|++
T Consensus 340 i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~G 419 (631)
T PRK07769 340 IKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIG 419 (631)
T ss_pred cccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEE
Confidence 5688999998643222111 000 000 000112344788888 888742
Q ss_pred -eEEecC---CCcccCCCcCC----------------------------CCceeeecCc---CCcccceeEECCcccChH
Q psy14342 173 -LWLSAV---SQYRVRDTFCS----------------------------CNGALYQGAE---RLALDETIMLRGMRYHPI 217 (316)
Q Consensus 173 -l~v~~~---~gY~~~~~~~~----------------------------~d~g~~~~g~---~GR~dd~i~~~G~~v~p~ 217 (316)
|+++|+ .|||++++.+. +|.|++++|. +||.||+||++|+||+|.
T Consensus 420 El~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~dG~l~i~GR~~d~Ik~~G~~V~p~ 499 (631)
T PRK07769 420 EIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYFDGELYITGRVKDLVIIDGRNHYPQ 499 (631)
T ss_pred EEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEECCEEEEEcccccEEEECCeeeCHH
Confidence 999999 89999876442 1444445444 999999999999999999
Q ss_pred hHHHHHHHhccccce--eEEEeeCC------------------------cEEEEEEecCC--chhhcchHHHHHHHHHHh
Q psy14342 218 DIENSVMRAHKKIAE--CAVFTWTN------------------------LLVVVVELDGN--ESEALDLVPLVTNAVLEE 269 (316)
Q Consensus 218 eIE~~l~~~~p~v~~--~~v~~~~~------------------------~~~~~v~~~~~--~~~~~~l~~~~~~~l~~~ 269 (316)
|||++|.+.||.|.+ ++|+++.+ .+++++++.+. ..+.+++.+++++.+...
T Consensus 500 eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~~~~~~l~~~~~~~l~~~ 579 (631)
T PRK07769 500 DLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHKLDPQPIADDIRAAIAVR 579 (631)
T ss_pred HHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCccccccHHHHHHHHHHHHHHH
Confidence 999999854899998 88887543 46777776654 234578999999998866
Q ss_pred cCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCCcch
Q psy14342 270 HHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPIY 311 (316)
Q Consensus 270 ~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~~~~ 311 (316)
++.+++.+.++..+.||+|++|||+|++|++.|.++.+..-|
T Consensus 580 ~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~~~~~~ 621 (631)
T PRK07769 580 HGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGSLRSGY 621 (631)
T ss_pred cCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCCCcccc
Confidence 665556788887678999999999999999999998876655
No 8
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.1e-41 Score=317.78 Aligned_cols=292 Identities=17% Similarity=0.077 Sum_probs=210.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||||++||++++.........++++++|+++..+|++|.+++.. ++.++..|+++++.+.. .
T Consensus 120 d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~t~v~~~~~---~ 195 (499)
T PLN03051 120 SVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPGDVVCWPTNLGWMMGPWL-LYSAFLNGATLALYGGA---P 195 (499)
T ss_pred ceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCCCEEEEccCcceeeehHH-HHHHHHcCCEEEecCCC---C
Confidence 5899999999999999999999998876665566778889999999999999999764 88999999999987532 1
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHH------hhhhhcccccccc-------------------cccccccchh
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHA------AVTSLCRSMKLAC-------------------ELYPSRHIAL 135 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~------~~~~~~~~~~ls~-------------------e~~~~yG~te 135 (316)
++..+++.++++++|+++.+|+++..+..... .... .+.+-..+ .+.+.||+||
T Consensus 196 ~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~-Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE 274 (499)
T PLN03051 196 LGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSK-LRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTE 274 (499)
T ss_pred CcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchh-heEEEecCCCCCHHHHHHHHHhccccceeEeeecccc
Confidence 46789999999999999999998876544321 1110 11111111 2567899999
Q ss_pred ccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-------------eEEecC-----CCcccCCCc---------
Q psy14342 136 CLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-------------LWLSAV-----SQYRVRDTF--------- 187 (316)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-------------l~v~~~-----~gY~~~~~~--------- 187 (316)
++..+....+. .....++.|.+.+|++ +++|++ |+++|+ .|||+++..
T Consensus 275 ~~~~~~~~~~~----~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~~~~~~~g~~~ 350 (499)
T PLN03051 275 LASGYISSTLL----QPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPM 350 (499)
T ss_pred ccceeeccccc----CCCCCccccCCCCCceEEEECCCCCCCCCCCCcceEEEEecCcCCCCccccCCcccceeeecCCc
Confidence 86433221110 0111234455889999 887742 899998 489875421
Q ss_pred ---------CCCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC------CcEEEEE--
Q psy14342 188 ---------CSCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT------NLLVVVV-- 246 (316)
Q Consensus 188 ---------~~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~------~~~~~~v-- 246 (316)
-++|.|++++ |. +||.||+||++|+||+|.|||++|.+.||.|.+|+|+++. +.+++++
T Consensus 351 ~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~ 430 (499)
T PLN03051 351 YGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVL 430 (499)
T ss_pred cccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEc
Confidence 2235555554 33 9999999999999999999999998438999999999883 2456665
Q ss_pred -EecCCc--hhhcchHHHHHHHHHHhc---CeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 247 -ELDGNE--SEALDLVPLVTNAVLEEH---HLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 247 -~~~~~~--~~~~~l~~~~~~~l~~~~---~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
++++.. .+.+++.+++++.+.+.. ..+. .+.+++ +||+|++||++|++|++.+.+
T Consensus 431 ~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~-~i~~v~--~lP~t~~GKi~r~~L~~~~~~ 491 (499)
T PLN03051 431 GEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVS-RVKIVP--ELPRNASNKLLRRVLRDQLKK 491 (499)
T ss_pred ceecccccccchHHHHHHHHHHHHhhcCCccCCc-eEEEcC--CCCCCCCccHHHHHHHHHHHH
Confidence 444432 344677777777665432 2232 466665 899999999999999988765
No 9
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-41 Score=326.57 Aligned_cols=297 Identities=10% Similarity=0.040 Sum_probs=211.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHH-HHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAA-VTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~-l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||+++|++ +..........+...++|+++...|+.|..+... ++.++..|+++++.+...+.
T Consensus 255 d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~-~~~~l~~G~t~v~~~~~~~~ 333 (647)
T PTZ00237 255 HPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGF-LYGSLSLGNTFVMFEGGIIK 333 (647)
T ss_pred CcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHH-HHHHHhCCcEEEEeCCCCCC
Confidence 689999999999999999999998 5444444455567778899999999999876654 88999999999998653221
Q ss_pred c--ChHHHHHHHhccceeeEEecccchhhHHhhHHhh-------h-hhcccccccc-----------------ccccccc
Q psy14342 80 V--NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-------T-SLCRSMKLAC-----------------ELYPSRH 132 (316)
Q Consensus 80 ~--~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-------~-~~~~~~~ls~-----------------e~~~~yG 132 (316)
. .+..+++.++++++|+++.+|+++..+....... . ...+.+-..+ .+.+.||
T Consensus 334 p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG 413 (647)
T PTZ00237 334 NKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYG 413 (647)
T ss_pred CCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeec
Confidence 1 1678999999999999999999887665432110 0 0011111111 2778999
Q ss_pred chhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC------CCcccCCCcCC-----
Q psy14342 133 IALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV------SQYRVRDTFCS----- 189 (316)
Q Consensus 133 ~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~------~gY~~~~~~~~----- 189 (316)
+||++.......+. .....+..|.|+||++ +++|++ |++++| .|||++++.+.
T Consensus 414 ~TE~~~~~~~~~~~----~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~ 489 (647)
T PTZ00237 414 QTEIGITYLYCYGH----INIPYNATGVPSIFIKPSILSEDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSK 489 (647)
T ss_pred hHHhChhhhccCCC----CCCCCCCCccCcCCceEEEECCCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhC
Confidence 99997433222110 0111234556899999 888754 899975 79999876542
Q ss_pred -------CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-
Q psy14342 190 -------CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE- 252 (316)
Q Consensus 190 -------~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~- 252 (316)
+|.|++++ |. +||.||+||++|+||+|.|||++|.+ ||.|.+|+|+++. +.+++++.+.+..
T Consensus 490 ~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~-~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~ 568 (647)
T PTZ00237 490 FPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILK-HPLVLECCSIGIYDPDCYNVPIGLLVLKQDQS 568 (647)
T ss_pred CCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHh-CCCceeeEEEeeEcCCCCCEEEEEEEeccCcc
Confidence 25555544 32 99999999999999999999999999 9999999999994 4567777666421
Q ss_pred ---hhhcchHHHHHHHHHHhcCee--ecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 253 ---SEALDLVPLVTNAVLEEHHLI--VGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 253 ---~~~~~l~~~~~~~l~~~~~~~--~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
.+.+++.+++++.+.+..... +..+.+++ +||+|++||++|+.|++.+...
T Consensus 569 ~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~--~lP~T~sGKi~R~~Lr~~~~~~ 624 (647)
T PTZ00237 569 NQSIDLNKLKNEINNIITQDIESLAVLRKIIIVN--QLPKTKTGKIPRQIISKFLNDS 624 (647)
T ss_pred ccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcC--CCCCCCCccEeHHHHHHHHcCC
Confidence 122355556665555433322 24555555 8999999999999999997643
No 10
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.7e-41 Score=325.51 Aligned_cols=300 Identities=20% Similarity=0.173 Sum_probs=216.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHH-HHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTS-LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||+++|+++.. ........++++++|+++...|+.|+.|+.+.++.++..|+++++.+.....
T Consensus 233 ~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~ 312 (628)
T TIGR02316 233 EPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTN 312 (628)
T ss_pred CcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCC
Confidence 579999999999999999999998754 3455666788999999999999999999877789999999999998765445
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHh-hh----hhcccccccc-----------------cccccccchhcc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA-VT----SLCRSMKLAC-----------------ELYPSRHIALCL 137 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~-~~----~~~~~~~ls~-----------------e~~~~yG~te~~ 137 (316)
.+|..|++.++++++|+++++|++++.+...... .. ...+.+-..+ .+.+.||+||++
T Consensus 313 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~ 392 (628)
T TIGR02316 313 PDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETG 392 (628)
T ss_pred CCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccC
Confidence 5789999999999999999999988765443211 00 0011111111 277899999987
Q ss_pred CCCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC------CCcccCCCcC----------
Q psy14342 138 DPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV------SQYRVRDTFC---------- 188 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~------~gY~~~~~~~---------- 188 (316)
.......+... ......|..|.|+||++ +++|++ |+++|| .|||++++.+
T Consensus 393 ~~~~~~~~~~~-~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~ 471 (628)
T TIGR02316 393 WPVLAIMPGLD-LKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKR 471 (628)
T ss_pred ceeecCCCCCC-cCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCC
Confidence 43322211000 01122234456899999 888752 899987 6788876532
Q ss_pred ----CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch--
Q psy14342 189 ----SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES-- 253 (316)
Q Consensus 189 ----~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~-- 253 (316)
++|.|++++ |. +||.||+||++|+||+|.|||++|.+ ||.|.+|+|+++. +.+++++.+.+...
T Consensus 472 ~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~-~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~ 550 (628)
T TIGR02316 472 PLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSS-HPSVAEVAVVGVHDELKGQVAVVFAILKESDSAG 550 (628)
T ss_pred CEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHh-CCCcceEEEEeeecCCCCeEEEEEEEEcCCcccc
Confidence 226666654 43 99999999999999999999999999 9999999999983 45666666654321
Q ss_pred ---hhcchHHHHHHHHHHhc---CeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 254 ---EALDLVPLVTNAVLEEH---HLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 254 ---~~~~l~~~~~~~l~~~~---~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
+...+.+++++.+.+.. ..| ..+.+++ .||+|++||++|+.|++.+...
T Consensus 551 ~~~~~~~~~~~i~~~~~~~L~~~~~P-~~v~~v~--~lP~t~sGKi~r~~L~~~~~~~ 605 (628)
T TIGR02316 551 DAHDPHAVETGMMDCVVRQLGAVARP-ARVYFVA--ALPKTRSGKLLRRSIQALAEGR 605 (628)
T ss_pred cccchHHHHHHHHHHHHHhcCCCcCC-CEEEEcC--CCCCCCchHHHHHHHHHHHcCC
Confidence 11233444555544433 333 4555555 8999999999999999887643
No 11
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-40 Score=320.84 Aligned_cols=306 Identities=22% Similarity=0.276 Sum_probs=222.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc-CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE-LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||++||+++..++......++ +.++|+.+.++|++|.+|+.. .+.+++.|+++++..+..+.
T Consensus 194 d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~-~~~~~~~gg~~~~~~~~~~~ 272 (612)
T PRK12476 194 DVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSM-IGFPAVYGGHSTLMSPTAFV 272 (612)
T ss_pred ceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHH-HHHHHhcCCeEEEECHHHHH
Confidence 5799999999999999999999999888777777777 788899999999999999987 44455566666666554445
Q ss_pred cChHHHHHHHh--ccceeeEEecccchhhHHhhH--H----hhh-hhcccccccc-----------------------cc
Q psy14342 80 VNPALWLSAVS--QYRVRDTFCSYGMLAGIKMSH--A----AVT-SLCRSMKLAC-----------------------EL 127 (316)
Q Consensus 80 ~~~~~~~~~~~--~~~~t~~~~~~~~~~~l~~~~--~----~~~-~~~~~~~ls~-----------------------e~ 127 (316)
.+|..|++.++ ++++++++.+|+++..+.... . ... ...+ +-..+ .+
T Consensus 273 ~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (612)
T PRK12476 273 RRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAF 351 (612)
T ss_pred HHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCcccc
Confidence 57899999994 588898888888766543321 0 000 0011 11111 15
Q ss_pred cccccchhccCCCCCCCc----eEEEEee------------------eccCcccccCCCce-EEecCc------------
Q psy14342 128 YPSRHIALCLDPYCGLGF----ALWVLSS------------------VYSGHHSILIPPSE-VEVNPA------------ 172 (316)
Q Consensus 128 ~~~yG~te~~~~~~~~~~----~~~~~~~------------------~~~g~~~~~~~g~~-~i~d~~------------ 172 (316)
++.||+||++.......+ ..+.... ...++.|.++||.+ +++|++
T Consensus 352 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GE 431 (612)
T PRK12476 352 KPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGE 431 (612)
T ss_pred ccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEE
Confidence 788999998643221111 0000000 00123355899999 887743
Q ss_pred eEEecC---CCcccCCCcCC-----------------------------CCceeeecCc---CCcccceeEECCcccChH
Q psy14342 173 LWLSAV---SQYRVRDTFCS-----------------------------CNGALYQGAE---RLALDETIMLRGMRYHPI 217 (316)
Q Consensus 173 l~v~~~---~gY~~~~~~~~-----------------------------~d~g~~~~g~---~GR~dd~i~~~G~~v~p~ 217 (316)
|+++|+ .|||++++.+. +|.|++++|. +||.||+||++|++|+|.
T Consensus 432 l~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~dG~l~i~GR~~d~I~~~G~~I~p~ 511 (612)
T PRK12476 432 IWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYLDGELYITGRIADLIVIDGRNHYPQ 511 (612)
T ss_pred EEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeECCEEEEEeccCcEEEECCcccCHH
Confidence 999999 89999876541 1444444443 899999999999999999
Q ss_pred hHHHHHHHhccccce--eEEEeeC----CcEEEEEEecCCc--hhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCC
Q psy14342 218 DIENSVMRAHKKIAE--CAVFTWT----NLLVVVVELDGNE--SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINS 289 (316)
Q Consensus 218 eIE~~l~~~~p~v~~--~~v~~~~----~~~~~~v~~~~~~--~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~ 289 (316)
|||++|.+.||.|.+ ++|++.. ++++++++..+.. .+.+++.+++++.+...++.++..+.++..++||+|+
T Consensus 512 eIE~~l~~~~p~V~~~~v~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~ 591 (612)
T PRK12476 512 DIEATVAEASPMVRRGYVTAFTVPAEDNERLVIVAERAAGTSRADPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTT 591 (612)
T ss_pred HHHHHHHHhcccccCCcEEEEEecCCCcceEEEEEEecCCcccccHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCC
Confidence 999999854899999 6667663 4677777766542 3456788999999987777766788888877899999
Q ss_pred CchhhHHHHHHHHHcCCCC
Q psy14342 290 RGEKQRMHLRDGFLADQLD 308 (316)
Q Consensus 290 ~gKi~r~~l~~~~~~~~~~ 308 (316)
+||++|++|++.|.++.++
T Consensus 592 ~GKi~r~~L~~~~~~~~~~ 610 (612)
T PRK12476 592 SGKLARRACRAQYLDGRLG 610 (612)
T ss_pred chHHHHHHHHHHHHcCCCC
Confidence 9999999999999998765
No 12
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1e-40 Score=323.34 Aligned_cols=296 Identities=14% Similarity=0.086 Sum_probs=206.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHH-HHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTS-LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||+++|++++. ........++++++|+++...|+.|..+ . .++.++..|+++++.+.....
T Consensus 265 d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~-~~~~~l~~G~t~vl~~g~~~~ 342 (652)
T TIGR01217 265 HPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW-N-WLVSGLATGATLVLYDGSPGF 342 (652)
T ss_pred CCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh-H-HHHHHHhcCcEEEEECCCCCC
Confidence 589999999999999999999998654 4445556688999999999999988743 2 256899999999998755445
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhh----h-hhccccccccc-------------------ccccccchh
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV----T-SLCRSMKLACE-------------------LYPSRHIAL 135 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~----~-~~~~~~~ls~e-------------------~~~~yG~te 135 (316)
.++..++++++++++|++..+|.++..+....... . +..+.+-..++ +...||+||
T Consensus 343 ~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE 422 (652)
T TIGR01217 343 PATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTD 422 (652)
T ss_pred CCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHH
Confidence 57889999999999998755555544332211000 0 00111111111 345699999
Q ss_pred ccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc----------eEEecC-----CCcccCCCcCC----------
Q psy14342 136 CLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA----------LWLSAV-----SQYRVRDTFCS---------- 189 (316)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~----------l~v~~~-----~gY~~~~~~~~---------- 189 (316)
++.......+. .....|..+.+.+|++ +++|++ |+++|| .|||++++.+.
T Consensus 423 ~~~~~~~~~~~----~~~~~g~~g~p~~g~~v~ivd~~g~~~~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~ 498 (652)
T TIGR01217 423 ICSCFAGANPT----LPVHIGEIQAPGLGTAVQSWDPEGKPVTGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYP 498 (652)
T ss_pred HhccccCCCCC----CCCcCCccCCCcCCCceEEECCCCCCCCCCccEEEEecCCCccccceeCCCccchhHHhhhcCCC
Confidence 75433221110 1112233344788998 887754 899986 79999986432
Q ss_pred -----CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhh
Q psy14342 190 -----CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEA 255 (316)
Q Consensus 190 -----~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~ 255 (316)
+|.|++++ |. +||.||+||++|+||+|.|||++|.+ ||.|.+|+|+++. +.+++++++.+.....
T Consensus 499 g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~-~p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~ 577 (652)
T TIGR01217 499 GVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVER-LDEVRESLCIGQEQPDGGYRVVLFVHLAPGATLD 577 (652)
T ss_pred CEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHh-CCCcceEEEEeeecCCCCEEEEEEEEECCCCCCC
Confidence 36666654 43 99999999999999999999999999 9999999999983 4677777776543323
Q ss_pred cchHHHHHHHHHHh---cCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCC
Q psy14342 256 LDLVPLVTNAVLEE---HHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 306 (316)
Q Consensus 256 ~~l~~~~~~~l~~~---~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~ 306 (316)
+++.+++++.+.+. +..| ..+.+++ .||+|++||++|+.|++.+...+
T Consensus 578 ~~~~~~l~~~~~~~l~~~~~P-~~i~~v~--~lP~T~sGKi~r~~Lr~~~~~~~ 628 (652)
T TIGR01217 578 DALLDRIKRTIRAGLSPRHVP-DEIIEVP--GIPHTLTGKRVEVAVKRVLQGTP 628 (652)
T ss_pred HHHHHHHHHHHHhhCCCCcCC-CEEEECC--CCCCCCCccChHHHHHHHHcCCC
Confidence 34444555554433 3333 4556555 89999999999999999876543
No 13
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.1e-40 Score=322.39 Aligned_cols=300 Identities=14% Similarity=0.083 Sum_probs=217.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHH-HHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLC-RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~-~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||+++|+++..+. ......+++.++|+++...|+.|..+..+.++.++..|+++++.+.....
T Consensus 237 ~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~ 316 (625)
T TIGR02188 237 DPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTY 316 (625)
T ss_pred CceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCC
Confidence 57999999999999999999999876543 34455678899999999999999988877789999999999998755445
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhcccccccc--------------------cccccccch
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLAC--------------------ELYPSRHIA 134 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~--------------------e~~~~yG~t 134 (316)
.+|..+++.++++++|+++.+|+++..+........ ...+.+-..+ .+++.||+|
T Consensus 317 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~T 396 (625)
T TIGR02188 317 PDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQT 396 (625)
T ss_pred CChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEeccccc
Confidence 578999999999999999999998876654322110 0001111111 166789999
Q ss_pred hccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC-----CCcccCCCcC--------
Q psy14342 135 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV-----SQYRVRDTFC-------- 188 (316)
Q Consensus 135 e~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~-----~gY~~~~~~~-------- 188 (316)
|++.......+.. .....|..+.|++|++ +++|++ |+++++ .|||++++.+
T Consensus 397 E~~~~~~~~~~~~---~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~ 473 (625)
T TIGR02188 397 ETGGIMITPLPGA---TPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPF 473 (625)
T ss_pred ccCCceeecCCCC---CCcCCCcccCCcCCceEEEECCCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccC
Confidence 9875432221110 0122344556899999 887642 889984 8999987642
Q ss_pred -----CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchh
Q psy14342 189 -----SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESE 254 (316)
Q Consensus 189 -----~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~ 254 (316)
++|.|++++ |. +||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++++.+....
T Consensus 474 ~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~-~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~ 552 (625)
T TIGR02188 474 PGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVS-HPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEP 552 (625)
T ss_pred CCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHh-CCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCC
Confidence 226666654 43 99999999999999999999999999 9999999999873 467777777665433
Q ss_pred hcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 255 ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 255 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+++.+++++.+.+.......+..++.+++||+|++||++|+.|++.+..
T Consensus 553 ~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~ 602 (625)
T TIGR02188 553 DDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAG 602 (625)
T ss_pred CHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcC
Confidence 33345555555554433322223333344899999999999999988764
No 14
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.5e-40 Score=314.35 Aligned_cols=291 Identities=13% Similarity=0.055 Sum_probs=209.6
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.+||+++..+.......+++.++|+++.++|++|.+|+...++.++..|+++++.... .
T Consensus 184 d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~---~ 260 (539)
T PRK06334 184 DVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNP---L 260 (539)
T ss_pred CEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCC---C
Confidence 5899999999999999999999999988887778888999999999999999999987788999999999886422 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
+|..+++.++++++|+++.+|+++..+........ ...+.+-.++ .+++.||+||++..
T Consensus 261 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~ 340 (539)
T PRK06334 261 YPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPV 340 (539)
T ss_pred CHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCce
Confidence 68899999999999999999998876554332110 0011111111 27789999998643
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcCC------------CC
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFCS------------CN 191 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~~------------~d 191 (316)
....... .....++.|.+++|++ +++|++ |+++|+ .|||++++.+. +|
T Consensus 341 ~~~~~~~----~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD 416 (539)
T PRK06334 341 ITINTVN----SPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGD 416 (539)
T ss_pred EEeccCC----CCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCC
Confidence 3222110 0011224456899999 887642 999999 89999876432 24
Q ss_pred ceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccce------eEEEeeCC-cEEEEEEecCCchhhcchHH
Q psy14342 192 GALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAE------CAVFTWTN-LLVVVVELDGNESEALDLVP 260 (316)
Q Consensus 192 ~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~------~~v~~~~~-~~~~~v~~~~~~~~~~~l~~ 260 (316)
.|++++ |. .||.||+||++|++|+|.|||++|.+ ||+|.+ ++|++..+ ...+++.+... .+.+++.+
T Consensus 417 ~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~-~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~ 494 (539)
T PRK06334 417 LGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILME-GFGQNAADHAGPLVVCGLPGEKVRLCLFTTFP-TSISEVND 494 (539)
T ss_pred EEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHH-ccCCccccccCceEEEcCCCCceEEEEEEecc-CChHHHHH
Confidence 555543 32 99999999999999999999999999 999987 77777743 32222222221 23345555
Q ss_pred HHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 261 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 261 ~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
.+++.....+..| ..+.+++ +||+|++||++|++|++...
T Consensus 495 ~l~~~~~~~~~~P-~~i~~v~--~lP~t~~GKi~r~~L~~~~~ 534 (539)
T PRK06334 495 ILKNSKTSSILKI-SYHHQVE--SIPMLGTGKPDYCSLNALAK 534 (539)
T ss_pred HHHhcCCcccccc-hheeeec--ccccccCCcccHHHHHHHHH
Confidence 5555422233333 4556665 89999999999999998754
No 15
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-40 Score=319.94 Aligned_cols=299 Identities=14% Similarity=0.058 Sum_probs=213.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHH-HHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTS-LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~-~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||++||++++. ........+++.++|+++...++.|..+. .++.++..|+++++.+.....
T Consensus 264 ~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~ 341 (655)
T PRK03584 264 HPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFY 341 (655)
T ss_pred CcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCC
Confidence 579999999999999999999998764 35556667889999999988888876432 367899999999998765545
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhh----h-hhcccccccc-------------------cccccccchh
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV----T-SLCRSMKLAC-------------------ELYPSRHIAL 135 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~----~-~~~~~~~ls~-------------------e~~~~yG~te 135 (316)
.+|..++++++++++|+++.+|+++..+....... . ...+.+-..+ .+.+.||+||
T Consensus 342 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE 421 (655)
T PRK03584 342 PDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTD 421 (655)
T ss_pred CCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHh
Confidence 67899999999999999988888876554321100 0 0011111111 1566899999
Q ss_pred ccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc----------eEEecC-----CCcccCCCcCC----------
Q psy14342 136 CLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA----------LWLSAV-----SQYRVRDTFCS---------- 189 (316)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~----------l~v~~~-----~gY~~~~~~~~---------- 189 (316)
++.......+. .....|..+.+++|++ +++|++ |+++|+ .|||++++.+.
T Consensus 422 ~~~~~~~~~~~----~~~~~g~~g~p~~g~~~~ivd~~g~~~~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~ 497 (655)
T PRK03584 422 ICSCFVGGNPL----LPVYRGEIQCRGLGMAVEAWDEDGRPVVGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFP 497 (655)
T ss_pred hhcccccCCCC----CCcCCCccCCCcCCceeEEECCCCCCCCCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCC
Confidence 86433211110 0112233445789999 888764 899985 79999876432
Q ss_pred -----CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhh
Q psy14342 190 -----CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEA 255 (316)
Q Consensus 190 -----~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~ 255 (316)
+|.|++++ |. +||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++++.+.....
T Consensus 498 g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~-~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~ 576 (655)
T PRK03584 498 GVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEA-LPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLD 576 (655)
T ss_pred CEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHh-CCCcceEEEEeeEcCCCCEEEEEEEEECCCCCCc
Confidence 36666654 43 99999999999999999999999999 9999999999983 4677777776543323
Q ss_pred cchHHHHHHHHHHhcCee--ecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCC
Q psy14342 256 LDLVPLVTNAVLEEHHLI--VGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 308 (316)
Q Consensus 256 ~~l~~~~~~~l~~~~~~~--~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~ 308 (316)
+++.+.+++.+.+..... +..+.++ ++||+|++||++|++|++.+......
T Consensus 577 ~~~~~~l~~~~~~~L~~~~~P~~i~~v--~~lP~t~sGKi~r~~lr~~~~~~~~~ 629 (655)
T PRK03584 577 DALRARIRTTIRTNLSPRHVPDKIIAV--PDIPRTLSGKKVELPVKKLLHGRPVK 629 (655)
T ss_pred HHHHHHHHHHHHhhCCCCcCCCEEEEC--CCCCCCCCccchHHHHHHHHcCCCCC
Confidence 334445555554433222 2345555 48999999999999999998866555
No 16
>KOG1175|consensus
Probab=100.00 E-value=2.7e-40 Score=305.77 Aligned_cols=299 Identities=15% Similarity=0.118 Sum_probs=237.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHH-HHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHA-AVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~-~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
||.+|+|||||||.||++.|++. .++..+.....++++.++|+++....+.|+.|.++..+.+|..|+++++.+..++
T Consensus 240 dpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~- 318 (626)
T KOG1175|consen 240 DPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPF- 318 (626)
T ss_pred CceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCC-
Confidence 68999999999999999999997 5777778888889999999999999999999999988999999999999987765
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhh-----ccccccccc------------------ccccccchhc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSL-----CRSMKLACE------------------LYPSRHIALC 136 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~-----~~~~~ls~e------------------~~~~yG~te~ 136 (316)
+|.++++++.++++|+++..|+.++.+.+........ .+.+--.+| +.+.||+||+
T Consensus 319 -~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEt 397 (626)
T KOG1175|consen 319 -DPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTET 397 (626)
T ss_pred -ChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeecc
Confidence 8899999999999999999999988665544332110 111111111 6889999999
Q ss_pred cCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC------CCcccCCCcCCC-------
Q psy14342 137 LDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV------SQYRVRDTFCSC------- 190 (316)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~------~gY~~~~~~~~~------- 190 (316)
+.......+-. .....|..+.+.+|.+ .++|++ |.++.+ .+||+|++....
T Consensus 398 G~~~i~~~~g~---~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~p 474 (626)
T KOG1175|consen 398 GGICITPKPGK---LPIKPGSAGKPFPGYDVQILDENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFP 474 (626)
T ss_pred CceeeeccCCC---CCcCccccCCCCCCcceEEECCCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCC
Confidence 87544333210 0244455556889999 888775 666666 689999773222
Q ss_pred ------Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee-----CCcEEEEEEecCCchhh
Q psy14342 191 ------NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEA 255 (316)
Q Consensus 191 ------d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~-----~~~~~~~v~~~~~~~~~ 255 (316)
|.++.+. |+ +||.||+||++|+++++.|||++|.+ ||.|.|++||+. +|.+.+++.++++..+.
T Consensus 475 g~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~-hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~ 553 (626)
T KOG1175|consen 475 GYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVE-HPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDP 553 (626)
T ss_pred ceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhh-CcchhheeeecCCCCCCCeEEEEEEEEcCCCCCh
Confidence 4555543 33 99999999999999999999999999 999999999999 45788889999988888
Q ss_pred cchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 256 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 256 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
++|.++|+.++++..++...+-.+..++.||+|.+||+.|+.||++....
T Consensus 554 ~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 554 EQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred HHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC
Confidence 89999999999987776444444444459999999999999999887764
No 17
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.2e-40 Score=317.21 Aligned_cols=299 Identities=15% Similarity=0.109 Sum_probs=216.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHH-HHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLC-RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~-~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||+++|+++.... ......+++.++|+++...|++|..++.+.++.++..|+++++.+.....
T Consensus 246 d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~ 325 (637)
T PRK00174 246 DPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNY 325 (637)
T ss_pred CcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCC
Confidence 57999999999999999999999986543 34455678889999999999999999877789999999999998654334
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhcccccccc--------------------cccccccch
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLAC--------------------ELYPSRHIA 134 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~--------------------e~~~~yG~t 134 (316)
.++..+++.++++++++++.+|+++..+........ ...+.+-..+ .+++.||+|
T Consensus 326 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~T 405 (637)
T PRK00174 326 PDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQT 405 (637)
T ss_pred CChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEeccccc
Confidence 578899999999999999999998876544321100 0011111111 267889999
Q ss_pred hccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEec--C---CCcccCCCcC---------
Q psy14342 135 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSA--V---SQYRVRDTFC--------- 188 (316)
Q Consensus 135 e~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~--~---~gY~~~~~~~--------- 188 (316)
|++.......+.. .....++.+.|++|++ +++|++ |+++| | .|||++++.+
T Consensus 406 E~~~~~~~~~~~~---~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~ 482 (637)
T PRK00174 406 ETGGIMITPLPGA---TPLKPGSATRPLPGIQPAVVDEEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFK 482 (637)
T ss_pred ccCCceEecCCCC---CCcCCCcccCCCCCceEEEECCCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCC
Confidence 9875332111100 0112234556899999 888764 89998 3 8999987643
Q ss_pred ----CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhh
Q psy14342 189 ----SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEA 255 (316)
Q Consensus 189 ----~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~ 255 (316)
++|.|++++ |. +||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++++.+.....
T Consensus 483 g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~-~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~ 561 (637)
T PRK00174 483 GMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVA-HPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPS 561 (637)
T ss_pred CEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHh-CCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCC
Confidence 225555543 43 99999999999999999999999999 9999999999873 4677777776544322
Q ss_pred cchHHHHHHHHHHhcCe--eecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 256 LDLVPLVTNAVLEEHHL--IVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 256 ~~l~~~~~~~l~~~~~~--~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
+++.+.+++.+.+.... .+..+.++ ++||+|++||++|++|++.+...
T Consensus 562 ~~~~~~l~~~l~~~l~~~~~P~~i~~v--~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 562 DELRKELRNWVRKEIGPIAKPDVIQFA--PGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred HHHHHHHHHHHHhhcCCccCCCEEEEc--CCCCCCCCcchHHHHHHHHHcCC
Confidence 33444555555543332 22345555 48999999999999999887643
No 18
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.7e-40 Score=322.00 Aligned_cols=296 Identities=15% Similarity=0.116 Sum_probs=215.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||||++||+++..++.+....+++.++|++++++|++|+++++. ++.++..|+++++.+.
T Consensus 222 d~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~-~~~~l~~G~~i~~~~~----- 295 (651)
T PLN02736 222 DVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVN-QIVMLHYGVAVGFYQG----- 295 (651)
T ss_pred ceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHH-HHHHHHcCCEEEEeCC-----
Confidence 6899999999999999999999999999888888888999999999999999999986 7889999999988642
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHh---------------------------------hh--------hhc-
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA---------------------------------VT--------SLC- 118 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~---------------------------------~~--------~~~- 118 (316)
++..+++.++++++|+++.+|.++..+...... .. ...
T Consensus 296 ~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 375 (651)
T PLN02736 296 DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLG 375 (651)
T ss_pred CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhc
Confidence 567899999999999999999887654322100 00 000
Q ss_pred cccc--cc-c-----------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEec-------
Q psy14342 119 RSMK--LA-C-----------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVN------- 170 (316)
Q Consensus 119 ~~~~--ls-~-----------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d------- 170 (316)
..++ ++ + .+++.||+||++.......+ .....++.|.|+||++ +++|
T Consensus 376 ~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~-----~~~~~~~vG~p~pg~~v~i~d~~~~~~~ 450 (651)
T PLN02736 376 GRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDE-----GDNLSGHVGSPNPACEVKLVDVPEMNYT 450 (651)
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCC-----CCCCCCccCCccCceEEEEEEccccCcc
Confidence 0111 11 1 27889999998754332221 1112344556899999 8876
Q ss_pred --------CceEEecC---CCcccCCCcCCC-----------Cceeeec-Cc---CCcccceeEE-CCcccChHhHHHHH
Q psy14342 171 --------PALWLSAV---SQYRVRDTFCSC-----------NGALYQG-AE---RLALDETIML-RGMRYHPIDIENSV 223 (316)
Q Consensus 171 --------~~l~v~~~---~gY~~~~~~~~~-----------d~g~~~~-g~---~GR~dd~i~~-~G~~v~p~eIE~~l 223 (316)
++|+++|| .|||++++.+.. |.|++++ |. +||.||+||+ +|++|+|.|||++|
T Consensus 451 ~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l 530 (651)
T PLN02736 451 SEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVY 530 (651)
T ss_pred cCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHH
Confidence 33999999 899999877643 4455543 33 9999999997 79999999999999
Q ss_pred HHhccccceeEEEeeC--CcEEEEEEecCCc---------hhhcchH---------HHHHHHHHH--------hcCeeec
Q psy14342 224 MRAHKKIAECAVFTWT--NLLVVVVELDGNE---------SEALDLV---------PLVTNAVLE--------EHHLIVG 275 (316)
Q Consensus 224 ~~~~p~v~~~~v~~~~--~~~~~~v~~~~~~---------~~~~~l~---------~~~~~~l~~--------~~~~~~~ 275 (316)
.+ ||.|.+|+|++.. +.+++++++.+.. .+..++. +.+.+.+.+ .++.+ .
T Consensus 531 ~~-~p~V~~a~V~g~~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~-~ 608 (651)
T PLN02736 531 AK-CKFVAQCFVYGDSLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFA-K 608 (651)
T ss_pred hc-CCCeeEEEEEecCCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceee-e
Confidence 99 9999999999863 4677777765421 1111222 222222211 22333 4
Q ss_pred EEEEEcCCCc------ccCCCchhhHHHHHHHHHcCCCCcchh
Q psy14342 276 VAVVVDPGVV------PINSRGEKQRMHLRDGFLADQLDPIYV 312 (316)
Q Consensus 276 ~~~~~~~~~l------P~t~~gKi~r~~l~~~~~~~~~~~~~~ 312 (316)
.+.+++ +. ++|++||++|+++++.|.+ .++.+|+
T Consensus 609 ~~~~~~--~~~~~~~~~lT~~~Ki~R~~i~~~~~~-~i~~~y~ 648 (651)
T PLN02736 609 AVTLVP--EPFTVENGLLTPTFKVKRPQAKAYFAK-AISDMYA 648 (651)
T ss_pred EEEEeC--CCCcCCCCcCChhhhhhHHHHHHHHHH-HHHHHHh
Confidence 555655 34 3799999999999999987 8888885
No 19
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2.6e-39 Score=309.12 Aligned_cols=295 Identities=15% Similarity=0.110 Sum_probs=213.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|.++|+++..+.......+++.++|+++.++|++|++|+.. ++.++..|+++++.+..
T Consensus 173 ~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~v~~~~~---- 247 (563)
T PLN02860 173 DAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-ALAMLMVGACHVLLPKF---- 247 (563)
T ss_pred CeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHH-HHHHHHcCceEEecCCC----
Confidence 5789999999999999999999999887777777889999999999999999999876 78999999999987532
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhcccccccc------------------cccccccchhcc
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLAC------------------ELYPSRHIALCL 137 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~------------------e~~~~yG~te~~ 137 (316)
++..+++.++++++|+++.+|+++..+........ ...+.+-.++ .+++.||+||++
T Consensus 248 ~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~ 327 (563)
T PLN02860 248 DAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEAC 327 (563)
T ss_pred CHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccC
Confidence 68889999999999999999998876654322100 0011111111 378899999986
Q ss_pred CCCCCCCc---eEEE------------Ee--eeccC-cccccCCCce-EEecCc------eEEecC---CCcccCCCcCC
Q psy14342 138 DPYCGLGF---ALWV------------LS--SVYSG-HHSILIPPSE-VEVNPA------LWLSAV---SQYRVRDTFCS 189 (316)
Q Consensus 138 ~~~~~~~~---~~~~------------~~--~~~~g-~~~~~~~g~~-~i~d~~------l~v~~~---~gY~~~~~~~~ 189 (316)
........ .... .. ....+ +.|.|+||++ ++++++ |+++|+ .|||++++.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~ 407 (563)
T PLN02860 328 SSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDESSRVGRILTRGPHVMLGYWGQNSETA 407 (563)
T ss_pred cccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCCCCceeEEEEecCcccccccCCccccc
Confidence 53321110 0000 00 00111 3456899999 886543 999999 89999887654
Q ss_pred C-----------Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEec
Q psy14342 190 C-----------NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELD 249 (316)
Q Consensus 190 ~-----------d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~ 249 (316)
. |.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++++.
T Consensus 408 ~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~-~p~V~~~~v~~~~~~~~~~~~~a~v~~~ 486 (563)
T PLN02860 408 SVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQ-HPGVASVVVVGVPDSRLTEMVVACVRLR 486 (563)
T ss_pred hhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHh-CCCcceeEEEEEecCcCCceEEEEEEEC
Confidence 3 5555543 33 99999999999999999999999999 9999999999983 4577777765
Q ss_pred CCc---------------hhhcchHHHHHHH-HHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 250 GNE---------------SEALDLVPLVTNA-VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 250 ~~~---------------~~~~~l~~~~~~~-l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+.. .+.+++.+.+++. +. .+..|. .+.++ .+++|+|++||++|++|++.+..
T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~-~~~~P~-~~~~~-~~~lP~t~~GKi~r~~L~~~~~~ 554 (563)
T PLN02860 487 DGWIWSDNEKENAKKNLTLSSETLRHHCREKNLS-RFKIPK-LFVQW-RKPFPLTTTGKIRRDEVRREVLS 554 (563)
T ss_pred CccccccccchhhcccccccHHHHHHHHhhCccc-ccccce-EEEEE-ecCCCCCcccchhHHHHHHHHHH
Confidence 431 1123444545442 44 344442 33332 23799999999999999998865
No 20
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2.9e-39 Score=300.47 Aligned_cols=290 Identities=10% Similarity=0.047 Sum_probs=207.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|++||+++..++......+++.+ ++.++++|++|.+|+.. ++.++..|+++++.+...+ .
T Consensus 121 ~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~-~~~~l~~G~t~v~~~~~~~-~ 197 (452)
T PRK07445 121 TGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQ-FMRSFLTGGKLVILPYKRL-K 197 (452)
T ss_pred CcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHH-HHHHHHcCCeEEEcChHhc-c
Confidence 5789999999999999999999999888887777777765 46788999999999876 7899999999998753221 1
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc----------------cccccccchhccCCCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC----------------ELYPSRHIALCLDPYCGLG 144 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~----------------e~~~~yG~te~~~~~~~~~ 144 (316)
. ......++++++++.+|+++..+...........+.+-.++ .+++.||+||++.......
T Consensus 198 ~---~~~~~~~~~~t~~~~vP~~l~~l~~~~~~~l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~ 274 (452)
T PRK07445 198 S---GQELPPNPSDFFLSLVPTQLQRLLQLRPQWLAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLK 274 (452)
T ss_pred c---hhhhhhhcCceEEEehHHHHHHHHhhChhhhhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccC
Confidence 1 12333467888888888888755432111000011111111 3788999999865433222
Q ss_pred ceEEEEeeeccCcccccCCCce-EEec---CceEEecC---CCcccCCCcC-----CCCceeeec-Cc---CCcccceeE
Q psy14342 145 FALWVLSSVYSGHHSILIPPSE-VEVN---PALWLSAV---SQYRVRDTFC-----SCNGALYQG-AE---RLALDETIM 208 (316)
Q Consensus 145 ~~~~~~~~~~~g~~~~~~~g~~-~i~d---~~l~v~~~---~gY~~~~~~~-----~~d~g~~~~-g~---~GR~dd~i~ 208 (316)
+... ....++.+.++||++ ++++ ++|+++|+ .|||+++... ++|.|++++ |. .||.||+||
T Consensus 275 ~~~~---~~~~~~~G~~~p~~~v~i~~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~ 351 (452)
T PRK07445 275 PDDF---LAGNNSSGQVLPHAQITIPANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDAQGYLHILGRNSQKII 351 (452)
T ss_pred chhh---ccCCCcCCccCCCCeEEEcCCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcCCCCEEEEeecCCEEE
Confidence 2100 011234455899999 6642 33999999 8999865322 447777754 43 999999999
Q ss_pred ECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHHHHHHHhcCeeecEEEEEcCC
Q psy14342 209 LRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPG 283 (316)
Q Consensus 209 ~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 283 (316)
++|+||+|.|||++|.+ ||.|.+|+|++.. +.+++++...+...+.+++.+++++.+. .++.| ..+.+++
T Consensus 352 ~~G~~V~p~eIE~~l~~-~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~~~~~~l~~~~~~~L~-~~~~P-~~i~~v~-- 426 (452)
T PRK07445 352 TGGENVYPAEVEAAILA-TGLVQDVCVLGLPDPHWGEVVTAIYVPKDPSISLEELKTAIKDQLS-PFKQP-KHWIPVP-- 426 (452)
T ss_pred ECCEEECHHHHHHHHHh-CCCcceEEEEeccCcCCCcEEEEEEEeCCCCCCHHHHHHHHHHhCC-cccCC-eEEEEec--
Confidence 99999999999999999 9999999999883 4566766655544445677777777766 45554 3555555
Q ss_pred CcccCCCchhhHHHHHHHHHc
Q psy14342 284 VVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 284 ~lP~t~~gKi~r~~l~~~~~~ 304 (316)
++|+|++||++|++|++.+.+
T Consensus 427 ~lP~t~~GKi~r~~L~~~~~~ 447 (452)
T PRK07445 427 QLPRNPQGKINRQQLQQIAVQ 447 (452)
T ss_pred CCCCCCCcccCHHHHHHHHHH
Confidence 899999999999999998876
No 21
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.6e-39 Score=310.39 Aligned_cols=298 Identities=16% Similarity=0.111 Sum_probs=224.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.+||+++..++......+++.++|++++++|++|.++++..++.++..|+++++.++..+..
T Consensus 214 ~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~ 293 (632)
T PRK07529 214 DVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRG 293 (632)
T ss_pred ceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCc
Confidence 57999999999999999999999999888888888888999999999999999999888899999999999987644322
Q ss_pred C--hHHHHHHHhccceeeEEecccchhhHHhhHHhh-h-hhcccccccc-----------------cccccccchhccCC
Q psy14342 81 N--PALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-T-SLCRSMKLAC-----------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~--~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-~-~~~~~~~ls~-----------------e~~~~yG~te~~~~ 139 (316)
. ...+++.+++++++++..+|+++..+....... . ...+.+-.++ .+++.||+||++..
T Consensus 294 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~ 373 (632)
T PRK07529 294 PGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDGHDISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCV 373 (632)
T ss_pred chHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccCCCccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcc
Confidence 1 357889999999999999999887665432211 0 0011111111 28889999998754
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEe--cC--------------ceEEecC---CCcccCCCcC----------C
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEV--NP--------------ALWLSAV---SQYRVRDTFC----------S 189 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~--d~--------------~l~v~~~---~gY~~~~~~~----------~ 189 (316)
....... .....++.|.++|+.+ +++ |+ +|+++|+ .||++++... +
T Consensus 374 ~~~~~~~----~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~T 449 (632)
T PRK07529 374 SSVNPPD----GERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNT 449 (632)
T ss_pred cccCCcc----ccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCccccccccCCCceEc
Confidence 4332211 1112345556788887 553 32 1999999 8999865322 2
Q ss_pred CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchH
Q psy14342 190 CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLV 259 (316)
Q Consensus 190 ~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~ 259 (316)
+|.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++++.+.. .+.+++.
T Consensus 450 GDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~-~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~ 528 (632)
T PRK07529 450 GDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLR-HPAVALAAAVGRPDAHAGELPVAYVQLKPGASATEAELL 528 (632)
T ss_pred CcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHh-CCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHH
Confidence 25555543 33 89999999999999999999999999 9999999999873 4577788776543 3446788
Q ss_pred HHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCC
Q psy14342 260 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 306 (316)
Q Consensus 260 ~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~ 306 (316)
+++++++.+.+..| ..+.+++ +||+|++||++|++|++.+....
T Consensus 529 ~~~~~~l~~~~~~P-~~i~~v~--~lP~t~~GKi~r~~Lr~~~~~~~ 572 (632)
T PRK07529 529 AFARDHIAERAAVP-KHVRILD--ALPKTAVGKIFKPALRRDAIRRV 572 (632)
T ss_pred HHHHHhcchhccCC-cEEEEec--CCCCCCCCcccHHHHHHHHHHHH
Confidence 88888887555555 4666665 89999999999999999887643
No 22
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-38 Score=304.91 Aligned_cols=311 Identities=18% Similarity=0.223 Sum_probs=226.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHH-HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL-ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~-~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||+|.++|++++.++..... .+++.++|+++.++|++|++|++..++.++..|+++++..+..+.
T Consensus 177 ~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~ 256 (579)
T PRK09192 177 DIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFA 256 (579)
T ss_pred CeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHH
Confidence 5799999999999999999999999988877776 788999999999999999999998788889999998877655555
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHH-hh--h----hhcccccccc-----------------------cccc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHA-AV--T----SLCRSMKLAC-----------------------ELYP 129 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~-~~--~----~~~~~~~ls~-----------------------e~~~ 129 (316)
.+|..|++.+.++++++.+ .|+++..+..... .. . ...+.+-..+ .+++
T Consensus 257 ~~~~~~~~~i~~~~~t~~~-~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~ 335 (579)
T PRK09192 257 RRPLQWLDLISRNRGTISY-SPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMP 335 (579)
T ss_pred HCHHHHHHHHHhcCcEEEe-CCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhccc
Confidence 5789999999999998554 4555433222110 00 0 0000000011 1678
Q ss_pred cccchhccCCCCCCCc--eEEE--Ee-------------------eeccCcccccCCCce-EEecCc-----------eE
Q psy14342 130 SRHIALCLDPYCGLGF--ALWV--LS-------------------SVYSGHHSILIPPSE-VEVNPA-----------LW 174 (316)
Q Consensus 130 ~yG~te~~~~~~~~~~--~~~~--~~-------------------~~~~g~~~~~~~g~~-~i~d~~-----------l~ 174 (316)
.||+||++........ .... .. ....++.|.++||.+ ++.|++ |+
T Consensus 336 ~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~ 415 (579)
T PRK09192 336 SYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRNEAGMPLPERVVGHIC 415 (579)
T ss_pred ccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEECCCCCCCCCCCEEEEE
Confidence 8999998643221110 0000 00 000123455899999 887753 99
Q ss_pred EecC---CCcccCCCcCC-----------CCceeeecCc---CCcccceeEECCcccChHhHHHHHHHhccccc--eeEE
Q psy14342 175 LSAV---SQYRVRDTFCS-----------CNGALYQGAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIA--ECAV 235 (316)
Q Consensus 175 v~~~---~gY~~~~~~~~-----------~d~g~~~~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~--~~~v 235 (316)
++|+ .|||++ +.+. +|.|++.+|. +||.||+||++|++|+|.|||++|.+ ||.|. +|+|
T Consensus 416 i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~-~p~V~~~~~~v 493 (579)
T PRK09192 416 VRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYLLDGYLYITGRAKDLIIINGRNIWPQDIEWIAEQ-EPELRSGDAAA 493 (579)
T ss_pred ecCCchhhhhcCC-ccccccccCCceeeccceeeEECCEEEEEeccccEEEECCCccCHHHHHHHHHh-cCCccCCcEEE
Confidence 9999 899998 3332 2566665554 99999999999999999999999999 99998 7888
Q ss_pred EeeC----CcEEEEEEecCCc-hhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCCcc
Q psy14342 236 FTWT----NLLVVVVELDGNE-SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPI 310 (316)
Q Consensus 236 ~~~~----~~~~~~v~~~~~~-~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~~~ 310 (316)
++.. +.++++++..... .+.+++.+++++.+...+..+ ..+.++..++||+|++||++|++|++.+.+|.++++
T Consensus 494 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~~-~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~~~~~~ 572 (579)
T PRK09192 494 FSIAQENGEKIVLLVQCRISDEERRGQLIHALAALVRSEFGVE-AAVELVPPHSLPRTSSGKLSRAKAKKRYLSGAFASL 572 (579)
T ss_pred EEeccCCCeeEEEEEEecCCChHHHHHHHHHHHHHHHHHhCCC-ceEEEeCCCCcCCCCCcchhHHHHHHHHHcCCCCcc
Confidence 8874 2466666554432 344678888888887556555 357777767899999999999999999999999988
Q ss_pred hhhcc
Q psy14342 311 YVAYN 315 (316)
Q Consensus 311 ~~~~~ 315 (316)
|.+-|
T Consensus 573 ~~~~~ 577 (579)
T PRK09192 573 DVAAS 577 (579)
T ss_pred ccccc
Confidence 87654
No 23
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-39 Score=307.45 Aligned_cols=292 Identities=16% Similarity=0.147 Sum_probs=215.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|+++|+++..++......+++.++|+++...|+.|.+|+...++.++..|+++++.... .
T Consensus 206 ~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~---~ 282 (570)
T PRK04319 206 DGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGR---F 282 (570)
T ss_pred CCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCC---C
Confidence 5799999999999999999999999988888888889999999999999999999887799999999999987532 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhh-h----hhcccccccc-----------------cccccccchhccC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-T----SLCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-~----~~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
+|..+++.++++++++++.+|+++..+....... . ...+.+-.++ .+++.||+||++.
T Consensus 283 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~ 362 (570)
T PRK04319 283 SPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGG 362 (570)
T ss_pred CHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCC
Confidence 6889999999999999999999887664422110 0 0011111111 2788999999875
Q ss_pred CCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEec--C---CCcccCCCcCC----------CC
Q psy14342 139 PYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSA--V---SQYRVRDTFCS----------CN 191 (316)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~--~---~gY~~~~~~~~----------~d 191 (316)
......+. .....+..|.++||++ +++|++ |++++ + .|||++++.+. +|
T Consensus 363 ~~~~~~~~----~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGD 438 (570)
T PRK04319 363 IMIANYPA----MDIKPGSMGKPLPGIEAAIVDDQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGD 438 (570)
T ss_pred EEEecCCC----CCCCCCcCcCCCCCCEEEEECCCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCc
Confidence 33221110 0112334556899999 887753 89986 5 79999876553 25
Q ss_pred ceeeecCc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHH
Q psy14342 192 GALYQGAE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLV 262 (316)
Q Consensus 192 ~g~~~~g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~ 262 (316)
.|++++++ +||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.++++++..+.....+++.+++
T Consensus 439 l~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~-~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l 517 (570)
T PRK04319 439 SAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLME-HPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEI 517 (570)
T ss_pred EEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhh-CCCeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHH
Confidence 55554432 89999999999999999999999999 9999999999873 45666676665432223333444
Q ss_pred HHHHHHh---cCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 263 TNAVLEE---HHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 263 ~~~l~~~---~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
+..+.+. +..| ..+.+++ +||+|++||++|++|++...
T Consensus 518 ~~~~~~~l~~~~~P-~~i~~v~--~iP~t~~GKv~r~~L~~~~~ 558 (570)
T PRK04319 518 RGFVKKGLGAHAAP-REIEFKD--KLPKTRSGKIMRRVLKAWEL 558 (570)
T ss_pred HHHHHHhcccccCC-cEEEEeC--CCCCCCchhhhHHHHHHHHh
Confidence 4444433 3333 3555554 99999999999999998864
No 24
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.4e-39 Score=309.74 Aligned_cols=301 Identities=17% Similarity=0.145 Sum_probs=215.6
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHH-HHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSL-CRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~-~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||+++|+++... ...+...+++.++|+++...|+.|..++.+.++.++..|+++++.+.....
T Consensus 234 d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~ 313 (629)
T PRK10524 234 EPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTR 313 (629)
T ss_pred CceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCC
Confidence 5899999999999999999999987543 344556678899999999999999999877789999999999998755445
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhh-h----hhcccccccc-----------------cccccccchhcc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-T----SLCRSMKLAC-----------------ELYPSRHIALCL 137 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-~----~~~~~~~ls~-----------------e~~~~yG~te~~ 137 (316)
.++..++++++++++|+++.+|+++..+....... . ...+.+-..+ .+++.||+||++
T Consensus 314 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~ 393 (629)
T PRK10524 314 PDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETG 393 (629)
T ss_pred CChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEecccccccc
Confidence 57889999999999999999999887654432110 0 0011111111 278899999997
Q ss_pred CCCCCCCceEEEEeeeccCcccccCCCce-EEecC-c-----------eEEecC------CCcccCCCcC----------
Q psy14342 138 DPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNP-A-----------LWLSAV------SQYRVRDTFC---------- 188 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~-~-----------l~v~~~------~gY~~~~~~~---------- 188 (316)
.......+... ......|..+.|+||++ +++|+ + |+++|| .|||++++.+
T Consensus 394 ~~~~~~~~~~~-~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (629)
T PRK10524 394 WPILAIARGVE-DRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGR 472 (629)
T ss_pred chhhcCCCCcc-cCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCC
Confidence 43222211000 00112234456899999 88887 2 899986 6788876432
Q ss_pred ----CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchh-
Q psy14342 189 ----SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESE- 254 (316)
Q Consensus 189 ----~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~- 254 (316)
++|.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.++++++..+....
T Consensus 473 ~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~-~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~ 551 (629)
T PRK10524 473 QVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISS-HPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLA 551 (629)
T ss_pred cEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHh-CCCcceEEEEccccCCCCeEEEEEEEECCCCccc
Confidence 225565543 43 99999999999999999999999999 9999999999884 356666666543211
Q ss_pred ----hcchHHHHHHHHHHhcCee--ecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 255 ----ALDLVPLVTNAVLEEHHLI--VGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 255 ----~~~l~~~~~~~l~~~~~~~--~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
.+++.+++++.+.+..... +..+.++ +.||+|++||++|+.|++.+...
T Consensus 552 ~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v--~~lP~T~sGKi~R~~L~~~~~~~ 606 (629)
T PRK10524 552 DREARLALEKEIMALVDSQLGAVARPARVWFV--SALPKTRSGKLLRRAIQAIAEGR 606 (629)
T ss_pred cccchHHHHHHHHHHHHhhcCCCcCCCEEEEc--CCCCCCCCcchHHHHHHHHHcCC
Confidence 1234555665555544332 2345555 48999999999999999987643
No 25
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-38 Score=311.38 Aligned_cols=294 Identities=15% Similarity=0.066 Sum_probs=209.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||||+|+|++++.........++++++|+++...|+.|+++.+. ++.+|..|+++++.+...
T Consensus 357 ~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~w~~g~~~-v~~~L~~Gat~vl~~g~p--- 432 (728)
T PLN03052 357 AFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGPWL-VYASLLNGATLALYNGSP--- 432 (728)
T ss_pred CcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCcHHHhHHHH-HHHHHHhCCEEEEeCCCC---
Confidence 5799999999999999999999988776655556678999999999999999988865 789999999999987432
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhh--h-hhcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV--T-SLCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~--~-~~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
.+..++++++++++|++..+|+++..+....... + +..+.+-..+ .+.+.||+||++..
T Consensus 433 ~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~ 512 (728)
T PLN03052 433 LGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGG 512 (728)
T ss_pred CCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcc
Confidence 2446899999999999999999887664432100 0 0011111111 15678999999754
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-------------eEEecC-----CCcccCC---------C-----
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-------------LWLSAV-----SQYRVRD---------T----- 186 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-------------l~v~~~-----~gY~~~~---------~----- 186 (316)
+....+. .....|..+.|.+|++ .++|++ |+++++ .+||++. +
T Consensus 513 ~~~~~~~----~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~~~~yf~~~p~~~g~ 588 (728)
T PLN03052 513 FVTGSLL----QPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGK 588 (728)
T ss_pred cccCCCC----CCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEeCCCCCCCccccCchhhhhhhhcCCCCCCC
Confidence 3322210 1112233445789999 877743 666654 2333321 1
Q ss_pred --cCCCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC------CcEEEEEEec--CCc
Q psy14342 187 --FCSCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT------NLLVVVVELD--GNE 252 (316)
Q Consensus 187 --~~~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~------~~~~~~v~~~--~~~ 252 (316)
..++|.+++++ |. +||.||+||++|+||+|.|||++|...||.|.+++|+++. +.++++++++ ++.
T Consensus 589 ~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~ 668 (728)
T PLN03052 589 ILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGS 668 (728)
T ss_pred EEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCC
Confidence 12336666654 43 9999999999999999999999996339999999999882 3577777765 322
Q ss_pred -hhhcchHHHHHHHHHHhcCe--eecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 253 -SEALDLVPLVTNAVLEEHHL--IVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 253 -~~~~~l~~~~~~~l~~~~~~--~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+.++|.+++++.+.+.... .+..+.+++ .||+|.+||++|++|++.+.+
T Consensus 669 ~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~--~lP~T~sGKi~Rr~Lr~~~~~ 721 (728)
T PLN03052 669 NPDLNELKKIFNSAIQKKLNPLFKVSAVVIVP--SFPRTASNKVMRRVLRQQLAQ 721 (728)
T ss_pred CCCHHHHHHHHHHHHHhhcCCccCCCEEEEcC--CCCCCCchHHHHHHHHHHHHh
Confidence 23467888888777754432 224555555 899999999999999998875
No 26
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.6e-39 Score=312.76 Aligned_cols=302 Identities=11% Similarity=0.040 Sum_probs=214.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHh-----cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC-----ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 75 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~ 75 (316)
|+++|+|||||||.||||++||+++...+......+ ++.++|++++++|++|.+++.. .+..+..|+++++.+
T Consensus 224 d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~- 301 (666)
T PLN02614 224 DICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR- 301 (666)
T ss_pred ceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-
Confidence 689999999999999999999999998776655544 5678899999999999999875 567788999998863
Q ss_pred cccccChHHHHHHHhccceeeEEecccchhhHHhhHHh-h----------------------------------------
Q psy14342 76 SEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA-V---------------------------------------- 114 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~-~---------------------------------------- 114 (316)
.++..+++.++++++|+++.+|.++..+...... .
T Consensus 302 ----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (666)
T PLN02614 302 ----GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVF 377 (666)
T ss_pred ----CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHH
Confidence 2678899999999999999999988755421100 0
Q ss_pred h---hhc-cccc--ccc------------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEe
Q psy14342 115 T---SLC-RSMK--LAC------------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEV 169 (316)
Q Consensus 115 ~---~~~-~~~~--ls~------------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~ 169 (316)
. ... ..++ +++ .+++.||+||++.......+. .....|+.|.|+||++ +++
T Consensus 378 ~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~----~~~~~gsvG~p~pg~evki~ 453 (666)
T PLN02614 378 NKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPD----ELDMLGTVGPPVPNVDIRLE 453 (666)
T ss_pred HHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccc----cCCcCCcccCcCCceEEEEe
Confidence 0 000 0111 111 277899999986432221111 0112345566899999 887
Q ss_pred c--------------CceEEecC---CCcccCCCcCCC----------Cceeeec-Cc---CCcccceeEE-CCcccChH
Q psy14342 170 N--------------PALWLSAV---SQYRVRDTFCSC----------NGALYQG-AE---RLALDETIML-RGMRYHPI 217 (316)
Q Consensus 170 d--------------~~l~v~~~---~gY~~~~~~~~~----------d~g~~~~-g~---~GR~dd~i~~-~G~~v~p~ 217 (316)
| ++|+++|| .|||++++.|.. |.|++++ |. +||.||+||+ +|++|+|.
T Consensus 454 d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~ 533 (666)
T PLN02614 454 SVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVE 533 (666)
T ss_pred eecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHH
Confidence 6 12999999 899999887643 5555543 33 9999999996 79999999
Q ss_pred hHHHHHHHhccccceeEEEeeCC--cEEEEEEecCCch-----------------hhcchHHHHHHHHHH--------hc
Q psy14342 218 DIENSVMRAHKKIAECAVFTWTN--LLVVVVELDGNES-----------------EALDLVPLVTNAVLE--------EH 270 (316)
Q Consensus 218 eIE~~l~~~~p~v~~~~v~~~~~--~~~~~v~~~~~~~-----------------~~~~l~~~~~~~l~~--------~~ 270 (316)
|||++|.+ ||.|.+|+|+|.+. .+++++.+..... ...++.+.+.+.+.+ .+
T Consensus 534 eIE~~l~~-~p~V~~~~V~g~~~~~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 612 (666)
T PLN02614 534 NIENIYGE-VQAVDSVWVYGNSFESFLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGF 612 (666)
T ss_pred HHHHHHhc-CCCeeEEEEEecCCcceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99999999 99999999999974 4677776653210 012233333333321 12
Q ss_pred CeeecEEEEEcCC-C---cccCCCchhhHHHHHHHHHcCCCCcchhhcc
Q psy14342 271 HLIVGVAVVVDPG-V---VPINSRGEKQRMHLRDGFLADQLDPIYVAYN 315 (316)
Q Consensus 271 ~~~~~~~~~~~~~-~---lP~t~~gKi~r~~l~~~~~~~~~~~~~~~~~ 315 (316)
..+ ..+.++... + =.+|+++|++|..+.+.|++ .++.+|+.+|
T Consensus 613 e~i-~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~-~i~~ly~~~~ 659 (666)
T PLN02614 613 EII-KAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQS-VIDEMYKTTN 659 (666)
T ss_pred cee-eEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHH-HHHHHHHhhh
Confidence 222 344444421 1 24899999999999999997 9999998765
No 27
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.6e-38 Score=303.53 Aligned_cols=294 Identities=15% Similarity=0.180 Sum_probs=216.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHH----HhcC-CCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----ACEL-YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 75 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~----~~~~-~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~ 75 (316)
|+++|+|||||||.||+|++||+++...+..+.. .+.. ...++++.++|++|.+|+...++.++..|+++++.++
T Consensus 199 ~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~ 278 (560)
T PLN02574 199 DVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRR 278 (560)
T ss_pred CEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecC
Confidence 5799999999999999999999999887766543 2222 2457888999999999998877888889999998764
Q ss_pred cccccChHHHHHHHhccceeeEEecccchhhHHhhHHhh----hhhcccccccc------------------cccccccc
Q psy14342 76 SEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV----TSLCRSMKLAC------------------ELYPSRHI 133 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~----~~~~~~~~ls~------------------e~~~~yG~ 133 (316)
. ++..+++.++++++|++..+|+++..+....... ....+.+-..+ .+++.||+
T Consensus 279 ~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~ 354 (560)
T PLN02574 279 F----DASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGM 354 (560)
T ss_pred C----CHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecccc
Confidence 3 6889999999999999999999887665433210 00011111111 27889999
Q ss_pred hhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcCCC-------
Q psy14342 134 ALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFCSC------- 190 (316)
Q Consensus 134 te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~~~------- 190 (316)
||++......... ......++.+.++||++ +++|++ ||++|+ .|||++++.+..
T Consensus 355 tE~~~~~~~~~~~---~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~ 431 (560)
T PLN02574 355 TESTAVGTRGFNT---EKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGW 431 (560)
T ss_pred cccCceeecCCCc---cccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCC
Confidence 9986432211100 01112234556899999 888742 999999 899998876532
Q ss_pred ----Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhc
Q psy14342 191 ----NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEAL 256 (316)
Q Consensus 191 ----d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~ 256 (316)
|.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.+++++...+.. .+.+
T Consensus 432 ~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~-~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~ 510 (560)
T PLN02574 432 LRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLIS-HPEIIDAAVTAVPDKECGEIPVAFVVRRQGSTLSQE 510 (560)
T ss_pred cccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHh-CCCcceEEEEccccCCCCcceEEEEEeCCCCCCCHH
Confidence 4555543 33 99999999999999999999999999 9999999999873 3466666655432 2345
Q ss_pred chHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCC
Q psy14342 257 DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 306 (316)
Q Consensus 257 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~ 306 (316)
++.+.+++++. .+..+ ..+.+++ ++|+|++||++|+.|++.+.+..
T Consensus 511 ~l~~~~~~~l~-~~~~p-~~v~~v~--~iP~t~~GKi~r~~L~~~~~~~~ 556 (560)
T PLN02574 511 AVINYVAKQVA-PYKKV-RKVVFVQ--SIPKSPAGKILRRELKRSLTNSV 556 (560)
T ss_pred HHHHHHHHhcc-CcccC-cEEEEee--ccCCCCcchhhHHHHHHHHhhcc
Confidence 77788877777 44444 4566665 89999999999999999987643
No 28
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-39 Score=304.89 Aligned_cols=286 Identities=14% Similarity=0.083 Sum_probs=217.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.++|+++...+......+++.++|+++.+.|++|.+|+.. ++.++..|+++++... .
T Consensus 208 ~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~l~~G~~~v~~~~----~ 282 (549)
T PRK07788 208 PGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAH-LTLAMALGSTVVLRRR----F 282 (549)
T ss_pred CCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHH-HHHHHHhCCEEEECCC----C
Confidence 4679999999999999999999999988888888888999999999999999999876 6789999999988743 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHh--hh---hhcccccccc-----------------cccccccchhccC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA--VT---SLCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~--~~---~~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
+|..+++.++++++|+++.+|+++..+...... .. ...+.+-.++ .+++.||+||++.
T Consensus 283 ~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~ 362 (549)
T PRK07788 283 DPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAF 362 (549)
T ss_pred CHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhch
Confidence 688999999999999999999988766543322 00 0011111112 2888999999864
Q ss_pred CCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC-------CCCceeee
Q psy14342 139 PYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC-------SCNGALYQ 196 (316)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~-------~~d~g~~~ 196 (316)
........ .....++.|.+++|++ +++|++ |+++|+ .||++++... ++|.|+++
T Consensus 363 ~~~~~~~~----~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~ 438 (549)
T PRK07788 363 ATIATPED----LAEAPGTVGRPPKGVTVKILDENGNEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFD 438 (549)
T ss_pred hhccChhh----hhhcCCCcccCCCCcEEEEECCCcCCCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEc
Confidence 32211100 0112234556899999 888754 999999 8999886542 33666664
Q ss_pred c-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHHHHHH
Q psy14342 197 G-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLVTNAV 266 (316)
Q Consensus 197 ~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~~~l 266 (316)
+ |. .||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.++++++..+.. .+.+++.+.+++.+
T Consensus 439 ~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~-~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~~~~~l 517 (549)
T PRK07788 439 EDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAG-HPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIKDYVRDNL 517 (549)
T ss_pred CCCCEEEeccCcceEEECCEEECHHHHHHHHHh-CCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4 33 89999999999999999999999999 9999999999873 4577777665532 34467888888877
Q ss_pred HHhcCeeecEEEEEcCCCcccCCCchhhHHHHHH
Q psy14342 267 LEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 300 (316)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~ 300 (316)
. .+..| ..+.+++ ++|+|++||++|++|++
T Consensus 518 ~-~~~~P-~~i~~v~--~lP~t~~GKi~r~~L~~ 547 (549)
T PRK07788 518 A-RYKVP-RDVVFLD--ELPRNPTGKVLKRELRE 547 (549)
T ss_pred h-cCCCC-cEEEEeC--CCCCCCCcCEeHHHhhc
Confidence 7 55555 4566665 89999999999999975
No 29
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-38 Score=311.56 Aligned_cols=290 Identities=19% Similarity=0.190 Sum_probs=211.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHH-HHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK-LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~-~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
+++||+|||||||.||||.++|+++......+. ..+++.++|+.+.+.|++|.+++...++.++..|+++++.+..
T Consensus 146 ~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~--- 222 (705)
T PRK06060 146 ALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAP--- 222 (705)
T ss_pred CeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCC---
Confidence 579999999999999999999999988776654 4678888999999999999999877788999999999987532
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-hhcccccccc------------------cccccccchhccCCC
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-SLCRSMKLAC------------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-~~~~~~~ls~------------------e~~~~yG~te~~~~~ 140 (316)
.++..++..++++++++++.+|+++..+........ ...+.+-..+ .+++.||+||++...
T Consensus 223 ~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 302 (705)
T PRK06060 223 VTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTF 302 (705)
T ss_pred CCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceE
Confidence 257778899999999999999998765543221100 0011111111 278899999986432
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC--------Cceeeec
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC--------NGALYQG 197 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~--------d~g~~~~ 197 (316)
..... .....++.|.++++++ +++|++ |+++|+ .|||++++.+.. |.|++++
T Consensus 303 ~~~~~-----~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~~ 377 (705)
T PRK06060 303 VSNRV-----DEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCIDS 377 (705)
T ss_pred EeccC-----CCCCcCcccccCCCcEEEEECCCCCCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEECC
Confidence 21111 0112234556899999 887754 999999 899998765432 5555543
Q ss_pred -Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhh----cchHHHHHH
Q psy14342 198 -AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEA----LDLVPLVTN 264 (316)
Q Consensus 198 -g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~----~~l~~~~~~ 264 (316)
|. .||.||+||++|+||+|.|||++|.+ ||.|.+++|++.. +.++++++........ .++.+.+++
T Consensus 378 dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~-~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~ 456 (705)
T PRK06060 378 DGWVTYRCRADDTEVIGGVNVDPREVERLIIE-DEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLN 456 (705)
T ss_pred CceEEEecccCceEEECCEEECHHHHHHHHHh-CCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHH
Confidence 33 99999999999999999999999999 9999999999884 3566666655432211 245555555
Q ss_pred HHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 265 AVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 265 ~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
.+. .+..| ..+.+++ +||+|++||++|++|++.+.
T Consensus 457 ~L~-~~~~P-~~i~~v~--~iP~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 457 RLS-AFKVP-HRFAVVD--RLPRTPNGKLVRGALRKQSP 491 (705)
T ss_pred hCC-CCcCC-cEEEEee--cCCCCcchhhHHHHHHhhcc
Confidence 555 44444 4555655 89999999999999998764
No 30
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-38 Score=299.41 Aligned_cols=296 Identities=16% Similarity=0.156 Sum_probs=220.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.++|+++...+......+++.++|++++++|++|.+|++..++.++..|+++++..... .
T Consensus 177 ~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~--~ 254 (534)
T PRK05852 177 DDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGR--F 254 (534)
T ss_pred CceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcC--c
Confidence 57899999999999999999999999888888888899999999999999999999888889999999888754332 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhh-----hhhcccccccc-----------------cccccccchhccC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-----TSLCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-----~~~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
++..+++.++++++|.++.+|.++..+....... ....+.+-.++ ++++.||+||++.
T Consensus 255 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~ 334 (534)
T PRK05852 255 SAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATH 334 (534)
T ss_pred CHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccch
Confidence 5778999999999999999999887665433211 00011111111 3888999999875
Q ss_pred CCCCCCceEE---EEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC----------
Q psy14342 139 PYCGLGFALW---VLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC---------- 190 (316)
Q Consensus 139 ~~~~~~~~~~---~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~---------- 190 (316)
.......... .......|..+ ..+|.+ +++|++ |+++|+ .|||++++.+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~g~~g-~~~g~~~~i~d~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TG 413 (534)
T PRK05852 335 QVTTTQIEGIGQTENPVVSTGLVG-RSTGAQIRIVGSDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTG 413 (534)
T ss_pred hhhcCCccccccccCcccccccCC-CCCCCeEEEECCCCCCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCcccC
Confidence 3322111000 00001122211 168888 888764 999999 899998766532
Q ss_pred Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHH
Q psy14342 191 NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVP 260 (316)
Q Consensus 191 d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~ 260 (316)
|.|++++ |. .||.||+||++|.+|+|.|||++|.+ ||.|.+|+|++.. +.+++++...+.. .+.+++.+
T Consensus 414 D~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~-~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~~~~i~~ 492 (534)
T PRK05852 414 DLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLAS-HPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPPTAEELVQ 492 (534)
T ss_pred ceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHh-CCCeeeEEEEecCCcCcCceEEEEEEECCCCCCCHHHHHH
Confidence 5666654 43 99999999999999999999999999 9999999999984 3466666554432 34467888
Q ss_pred HHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 261 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 261 ~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
++++++. .+..| ..+.+++ ++|+|++||++|++|++.|.+
T Consensus 493 ~~~~~l~-~~~~P-~~i~~v~--~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 493 FCRERLA-AFEIP-ASFQEAS--GLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred HHHHhcc-cccCC-eEEEEhh--hcCCCCCccccHHHHHHHhcc
Confidence 8887776 55554 3555555 899999999999999999865
No 31
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-38 Score=301.82 Aligned_cols=290 Identities=16% Similarity=0.150 Sum_probs=219.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|.++|++++.++......+++.++|+++.++|++|.+|+...++.++..|+++++.++.
T Consensus 191 ~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~---- 266 (546)
T PRK08314 191 DLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRW---- 266 (546)
T ss_pred CeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCC----
Confidence 5799999999999999999999999998888888888999999999999999999988889999999999998643
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~~~ 140 (316)
++..+++.++++++|+++.+|+++..+........ ...+.+-..+ .+++.||+||++...
T Consensus 267 ~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 346 (546)
T PRK08314 267 DREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQT 346 (546)
T ss_pred CHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccce
Confidence 57889999999999999999988765543211000 0001111111 388899999987543
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcC--------------CC
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFC--------------SC 190 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~--------------~~ 190 (316)
....+. ....+..|.+++|.+ +++|++ |+++|+ .||++++..+ ++
T Consensus 347 ~~~~~~-----~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TG 421 (546)
T PRK08314 347 HSNPPD-----RPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTG 421 (546)
T ss_pred ecCCCc-----CCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecC
Confidence 322211 111234455789999 888742 999999 8999986543 22
Q ss_pred Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch---hhcch
Q psy14342 191 NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES---EALDL 258 (316)
Q Consensus 191 d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~---~~~~l 258 (316)
|.|++++ |. .||.||+|+++|++|+|.|||++|.+ ||.|.+++|++.. +.++++++..+... +.+++
T Consensus 422 Dl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~-~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~l 500 (546)
T PRK08314 422 DLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYK-HPAIQEACVIATPDPRRGETVKAVVVLRPEARGKTTEEEI 500 (546)
T ss_pred CEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHh-CcchheEEEEeCCCcccCceeEEEEEECCCCCCCCCHHHH
Confidence 5555544 32 89999999999999999999999999 9999999999873 46777777665432 22567
Q ss_pred HHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 259 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 259 ~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+++++.+. .+..| ..+.+++ ++|+|++||++|++|++...+
T Consensus 501 ~~~~~~~l~-~~~~P-~~~~~v~--~iP~t~~GKv~r~~L~~~~~~ 542 (546)
T PRK08314 501 IAWAREHMA-AYKYP-RIVEFVD--SLPKSGSGKILWRQLQEQEKA 542 (546)
T ss_pred HHHHHHhcc-cCCCC-cEEEEec--CCCCCCccceeHHHHHHHHhh
Confidence 777777666 44443 4556655 899999999999999887654
No 32
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.9e-38 Score=309.54 Aligned_cols=291 Identities=12% Similarity=0.093 Sum_probs=211.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||||++||+++...+......++++++|+++.++|++|.+|+...++.++..|+++++.+.. .
T Consensus 366 d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~---~ 442 (718)
T PRK08043 366 DAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSP---L 442 (718)
T ss_pred CeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCc---c
Confidence 6899999999999999999999999988888888889999999999999999999987788999999999987532 1
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-hhcccccccc-----------------cccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-SLCRSMKLAC-----------------ELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-~~~~~~~ls~-----------------e~~~~yG~te~~~~~~~ 142 (316)
++..+++.++++++|+++.+|+++..+........ ...+.+-.++ .+++.||+||++.....
T Consensus 443 ~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~ 522 (718)
T PRK08043 443 HYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSI 522 (718)
T ss_pred cHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEEe
Confidence 45677899999999999888887654433211100 0011111111 27889999998643322
Q ss_pred CCceEEEEeeeccCcccccCCCce-EEecCc-------eEEecC---CCcccC--CCc-------C-----------CCC
Q psy14342 143 LGFALWVLSSVYSGHHSILIPPSE-VEVNPA-------LWLSAV---SQYRVR--DTF-------C-----------SCN 191 (316)
Q Consensus 143 ~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-------l~v~~~---~gY~~~--~~~-------~-----------~~d 191 (316)
..+. ....++.|.++||++ +++|++ |+++|+ .|||++ ++. + ++|
T Consensus 523 ~~~~-----~~~~~svG~p~pg~~~~i~d~~~~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGD 597 (718)
T PRK08043 523 NVPM-----AAKPGTVGRILPGMDARLLSVPGIEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGD 597 (718)
T ss_pred cCCc-----ccCCCCCCCcCCCCeeEEecCCCCCCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCC
Confidence 2110 112345566899999 887643 999999 899983 321 1 114
Q ss_pred ceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHH
Q psy14342 192 GALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLV 262 (316)
Q Consensus 192 ~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~ 262 (316)
.|++++ |. +||.||+||++|++|+|.|||++|.+ |+.+.+++|++.. +.+++++. ....+.+++.+++
T Consensus 598 lg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~-~~~~~~~avv~~~~~~~ge~~v~~~~--~~~~~~~~l~~~~ 674 (718)
T PRK08043 598 IVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALG-VSPDKQHATAIKSDASKGEALVLFTT--DSELTREKLQQYA 674 (718)
T ss_pred EEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHh-CCccceEEEEEccCCCCCceEEEEEc--CcccCHHHHHHHH
Confidence 555543 33 99999999999999999999999999 9888888888763 34444432 2223345667777
Q ss_pred HHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 263 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 263 ~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
++.....+..| ..+.+++ ++|+|++||++|++|++.+.+.
T Consensus 675 ~~~~l~~~~vP-~~i~~v~--~lP~t~~GKi~r~~L~~~~~~~ 714 (718)
T PRK08043 675 REHGVPELAVP-RDIRYLK--QLPLLGSGKPDFVTLKSMVDEP 714 (718)
T ss_pred HhcCCCcccCC-ceEEEec--ccCcCCCCCcCHHHHHHHHhcc
Confidence 66522255555 4666666 8999999999999999988763
No 33
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.1e-38 Score=293.80 Aligned_cols=287 Identities=12% Similarity=0.093 Sum_probs=217.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|+++|+++..++......+++.++|+++...|++|..++.. ++.++..|+++++.+..
T Consensus 144 ~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~-~~~~l~~g~~~~~~~~~---- 218 (487)
T PRK07638 144 APFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYG-AISTLYVGQTVHLMRKF---- 218 (487)
T ss_pred CcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHH-HHHHHccCcEEEEcCCC----
Confidence 4799999999999999999999999988888888889999999999999999887765 88999999999987542
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc------------------cccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC------------------ELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~------------------e~~~~yG~te~~~~~~~ 142 (316)
+|..+++.++++++|+++.+|+++..+.......... ..+-.++ ++++.||+||++.....
T Consensus 219 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 297 (487)
T PRK07638 219 IPNQVLDKLETENISVMYTVPTMLESLYKENRVIENK-MKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTAL 297 (487)
T ss_pred CHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcCcCCce-eEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEe
Confidence 6889999999999999999999887665432211100 0111111 38889999998743221
Q ss_pred CCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC----------CCCceeeec
Q psy14342 143 LGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC----------SCNGALYQG 197 (316)
Q Consensus 143 ~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~----------~~d~g~~~~ 197 (316)
.... .....++.|.+++|.. +++|++ |+++|+ .|||+++..+ ++|.|++++
T Consensus 298 ~~~~----~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~ 373 (487)
T PRK07638 298 VDEE----SERRPNSVGRPFHNVQVRICNEAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDE 373 (487)
T ss_pred cccc----cCCCCCCCCcccCCcEEEEECCCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcC
Confidence 1100 0111234556899999 888754 999999 8999986432 346666654
Q ss_pred Cc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHHHHHHH
Q psy14342 198 AE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLE 268 (316)
Q Consensus 198 g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~l~~ 268 (316)
++ .||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++.. ....+++.+++++.+.
T Consensus 374 ~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~---~~~~~~l~~~~~~~l~- 448 (487)
T PRK07638 374 EGFIYIVGREKNMILFGGINIFPEEIESVLHE-HPAVDEIVVIGVPDSYWGEKPVAIIKG---SATKQQLKSFCLQRLS- 448 (487)
T ss_pred CCeEEEEecCCCeEEeCCEEECHHHHHHHHHh-CCCeeeEEEEecCchhcCCeeEEEEEC---CCCHHHHHHHHHHHhh-
Confidence 33 99999999999999999999999999 9999999999884 345555543 2344678888888887
Q ss_pred hcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 269 EHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 269 ~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
.+..| ..+.+++ ++|+|++||++|++|++.+...
T Consensus 449 ~~~~p-~~i~~v~--~iP~t~~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 449 SFKIP-KEWHFVD--EIPYTNSGKIARMEAKSWIENQ 482 (487)
T ss_pred cccCC-cEEEEec--ccCCCCcccccHHHHHHHHhcc
Confidence 45555 4566665 8999999999999999887763
No 34
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-38 Score=298.61 Aligned_cols=297 Identities=13% Similarity=0.072 Sum_probs=207.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHH----HHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK----LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 76 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~----~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~ 76 (316)
++++++|||||||.||||.++|+++..+..... ..++...+++.+.++|++|.++++. .+.+++.|+++++.+
T Consensus 170 ~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~-~~~~l~~G~~~v~~~-- 246 (540)
T PRK05857 170 DPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWW-ILTCLMHGGLCVTGG-- 246 (540)
T ss_pred CeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHH-HHHHhhcceeEEecC--
Confidence 589999999999999999999999877654332 2345567789999999999999986 788999999887632
Q ss_pred ccccChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhccccc---ccc----------------cccccccchhcc
Q psy14342 77 EVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMK---LAC----------------ELYPSRHIALCL 137 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~---ls~----------------e~~~~yG~te~~ 137 (316)
.++..+++.++++++++++.+|+++..+............++. .++ .+.+.||+||++
T Consensus 247 ---~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~i~~~YG~TE~~ 323 (540)
T PRK05857 247 ---ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFIEATGVRTAQVYGLSETG 323 (540)
T ss_pred ---CChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHHHHhCCeeecccCCCcCC
Confidence 2577899999999999999999988765443221000001111 111 278899999986
Q ss_pred CCCCCCCceEEEEeeeccCcccccCCCce-EEecC-----------------ceEEecC---CCcccCCCcCCC------
Q psy14342 138 DPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNP-----------------ALWLSAV---SQYRVRDTFCSC------ 190 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~-----------------~l~v~~~---~gY~~~~~~~~~------ 190 (316)
..................++.|.+++|++ +++|+ +|+++|+ .|||++++.+..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~ 403 (540)
T PRK05857 324 CTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGW 403 (540)
T ss_pred ceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCc
Confidence 42211110000000112344556899999 77762 2899999 899998776532
Q ss_pred ----CceeeecCc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeCC-----cEEEEEEecCCc--hhh
Q psy14342 191 ----NGALYQGAE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTN-----LLVVVVELDGNE--SEA 255 (316)
Q Consensus 191 ----d~g~~~~g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~~-----~~~~~v~~~~~~--~~~ 255 (316)
|.|++++++ .||.||+||++|++|+|.|||++|.. ||.|.+|+|++..+ .+++++...+.. ...
T Consensus 404 ~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~-~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~ 482 (540)
T PRK05857 404 VNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEG-VSGVREAACYEIPDEEFGALVGLAVVASAELDESAA 482 (540)
T ss_pred eeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHh-CCCeeEEEEEecCccccccceEEEEEeCCCCChhhH
Confidence 666665443 99999999999999999999999999 99999999998842 444444443321 112
Q ss_pred cchHHHHHHHHHHhcCe--eecEEEEEcCCCcccCCCchhhHHHHHHHHHcCC
Q psy14342 256 LDLVPLVTNAVLEEHHL--IVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 306 (316)
Q Consensus 256 ~~l~~~~~~~l~~~~~~--~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~ 306 (316)
+++.+.+++.+.+.... .+..+.++ +++|+|++||++|++|++.+....
T Consensus 483 ~~l~~~~~~~~~~~l~~~~~P~~v~~~--~~iP~t~~GKi~r~~l~~~~~~~~ 533 (540)
T PRK05857 483 RALKHTIAARFRRESEPMARPSTIVIV--TDIPRTQSGKVMRASLAAAATADK 533 (540)
T ss_pred HHHHHHHHHHHHhhhccccCCeEEEEh--hcCCCCCCcceeHHHHHHhhhhcc
Confidence 34556665555433322 22344444 489999999999999999888644
No 35
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.7e-38 Score=308.08 Aligned_cols=301 Identities=13% Similarity=0.040 Sum_probs=211.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc-----CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE-----LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 75 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~-----~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~ 75 (316)
|+++|+|||||||.||||++||+++...+......++ +.++|++++++|++|+++++. .+.+++.|+++++..
T Consensus 221 d~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~- 298 (660)
T PLN02861 221 DICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ- 298 (660)
T ss_pred ceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-
Confidence 6899999999999999999999999988776665554 467899999999999999876 556899999998863
Q ss_pred cccccChHHHHHHHhccceeeEEecccchhhHHhhH------------------------------------Hhhhh---
Q psy14342 76 SEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSH------------------------------------AAVTS--- 116 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~------------------------------------~~~~~--- 116 (316)
.++..+++.++++++|+++.+|.++..+.... .....
T Consensus 299 ----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (660)
T PLN02861 299 ----GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVF 374 (660)
T ss_pred ----CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHH
Confidence 25788999999999999999999887553210 00000
Q ss_pred -----hc-cccc--ccc------------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEe
Q psy14342 117 -----LC-RSMK--LAC------------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEV 169 (316)
Q Consensus 117 -----~~-~~~~--ls~------------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~ 169 (316)
.. ..++ +++ .+.+.||+||++.......+. .....|+.|.|+||++ +++
T Consensus 375 ~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~----~~~~~gsvG~p~p~~ev~i~ 450 (660)
T PLN02861 375 DKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIAN----VFSMVGTVGVPMTTIEARLE 450 (660)
T ss_pred HHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccc----cCCCCCCccCccCceEEEEE
Confidence 00 0111 111 267899999986433222110 0112345566899999 887
Q ss_pred c--------------CceEEecC---CCcccCCCcCCC----------Cceeeec-Cc---CCcccceeEE-CCcccChH
Q psy14342 170 N--------------PALWLSAV---SQYRVRDTFCSC----------NGALYQG-AE---RLALDETIML-RGMRYHPI 217 (316)
Q Consensus 170 d--------------~~l~v~~~---~gY~~~~~~~~~----------d~g~~~~-g~---~GR~dd~i~~-~G~~v~p~ 217 (316)
| ++|+++|| .|||++++.+.. |.|++++ |. +||.||+||+ +|++|+|.
T Consensus 451 d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~ 530 (660)
T PLN02861 451 SVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVE 530 (660)
T ss_pred EccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHH
Confidence 5 23999999 899999887643 5666654 33 9999999996 79999999
Q ss_pred hHHHHHHHhccccceeEEEeeC--CcEEEEEEecCCch-----------hhc------chHHHHHHHHHH---hcCe---
Q psy14342 218 DIENSVMRAHKKIAECAVFTWT--NLLVVVVELDGNES-----------EAL------DLVPLVTNAVLE---EHHL--- 272 (316)
Q Consensus 218 eIE~~l~~~~p~v~~~~v~~~~--~~~~~~v~~~~~~~-----------~~~------~l~~~~~~~l~~---~~~~--- 272 (316)
|||++|.+ ||.|.+|+|+|.+ +.+++++++..... +.. +....+.+.+.+ ..++
T Consensus 531 eIE~~l~~-~p~V~~a~V~G~~~~~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 609 (660)
T PLN02861 531 NLENTYSR-CPLIASIWVYGNSFESFLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGF 609 (660)
T ss_pred HHHHHHhc-CCCeeEEEEEecCCcceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99999999 9999999999997 45677766543210 001 122222222221 1111
Q ss_pred -eecEEEEEcCCCc-----ccCCCchhhHHHHHHHHHcCCCCcchhhc
Q psy14342 273 -IVGVAVVVDPGVV-----PINSRGEKQRMHLRDGFLADQLDPIYVAY 314 (316)
Q Consensus 273 -~~~~~~~~~~~~l-----P~t~~gKi~r~~l~~~~~~~~~~~~~~~~ 314 (316)
....+.+.. +.+ .+|+++|++|+.+.+.|++ .++.+|...
T Consensus 610 e~i~~~~l~~-~~ft~~ng~lT~t~K~~R~~i~~~y~~-~I~~lY~~~ 655 (660)
T PLN02861 610 EMLKAIHLEP-NPFDIERDLITPTFKLKRPQLLKYYKD-CIDQLYSEA 655 (660)
T ss_pred ceeeEEEEeC-CCCCcccCcCCHHHhhhHHHHHHHHHH-HHHHHHHhh
Confidence 112333322 244 7999999999999999998 899898653
No 36
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.1e-37 Score=296.37 Aligned_cols=296 Identities=17% Similarity=0.143 Sum_probs=213.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHH----HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL----ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 76 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~ 76 (316)
++++++|||||||.||+|+++|+++......... .+++.++|+++.++|++|.+++...++.++..|+++++.++.
T Consensus 180 ~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~ 259 (537)
T PLN02246 180 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKF 259 (537)
T ss_pred CEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCC
Confidence 4789999999999999999999999877654433 467889999999999999999877788999999999998643
Q ss_pred ccccChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccccccc------------------cccccccchh
Q psy14342 77 EVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLAC------------------ELYPSRHIAL 135 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls~------------------e~~~~yG~te 135 (316)
++..+++.+++++++++..+|+++..+......... ..+.+-.++ .+.+.||+||
T Consensus 260 ----~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE 335 (537)
T PLN02246 260 ----EIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTE 335 (537)
T ss_pred ----CHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccc
Confidence 578899999999999999999987766443221100 011111111 1667899999
Q ss_pred ccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcCCC---------
Q psy14342 136 CLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFCSC--------- 190 (316)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~~~--------- 190 (316)
++..................+..|.+++|.+ +++|++ |+++|+ .|||++++.+..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~ 415 (537)
T PLN02246 336 AGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLH 415 (537)
T ss_pred cCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCee
Confidence 8643221110000000011233455789999 887742 999999 899998766532
Q ss_pred --CceeeecCc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcch
Q psy14342 191 --NGALYQGAE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDL 258 (316)
Q Consensus 191 --d~g~~~~g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l 258 (316)
|.|++++++ .||.||+||.+|++|+|.|||++|.+ ||+|.+++|++.. +.+++++...+.. .+.+++
T Consensus 416 TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 494 (537)
T PLN02246 416 TGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIS-HPSIADAAVVPMKDEVAGEVPVAFVVRSNGSEITEDEI 494 (537)
T ss_pred ecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHh-CCCeeEEEEEcccCccCCceeEEEEEeCCCCCCCHHHH
Confidence 555555432 99999999999999999999999999 9999999999873 3566666555432 223456
Q ss_pred HHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 259 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 259 ~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
.+.+++.+. .+..+ ..+.+++ ++|+|++||++|++|++.+.++
T Consensus 495 ~~~l~~~l~-~~~~p-~~i~~~~--~~P~t~~GKi~r~~L~~~~~~~ 537 (537)
T PLN02246 495 KQFVAKQVV-FYKRI-HKVFFVD--SIPKAPSGKILRKDLRAKLAAG 537 (537)
T ss_pred HHHHHhhCc-Ccccc-ceEEEec--cCCCCCcchhhHHHHHHHHhcC
Confidence 666666555 34443 3455554 8999999999999999988753
No 37
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=4.3e-38 Score=328.22 Aligned_cols=296 Identities=12% Similarity=0.069 Sum_probs=208.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|++||+|||||||.||||+++|+++...+..+...+++.++|+++.+.|++|+.++.. +|.+++.|+++++.+.. ...
T Consensus 416 d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~-i~~~L~~G~~l~~~~~~-~~~ 493 (1389)
T TIGR03443 416 SNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPIQRD-MFTPLFLGAQLLVPTAD-DIG 493 (1389)
T ss_pred CceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecchHHH-HHHHHhCCCEEEEcChh-hcc
Confidence 5799999999999999999999999999888888899999999999999999988876 89999999999887544 345
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHH-hhhhhcccccccc------------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHA-AVTSLCRSMKLAC------------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~-~~~~~~~~~~ls~------------------e~~~~yG~te~~~~~~ 141 (316)
+|..+++.++++++|+++.+|+++..+..... .... .+.+-+.+ .+++.||+||++....
T Consensus 494 ~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~-lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 572 (1389)
T TIGR03443 494 TPGRLAEWMAKYGATVTHLTPAMGQLLSAQATTPIPS-LHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVS 572 (1389)
T ss_pred CHHHHHHHHHHhCCeEEEeCHHHHHHHHhcccccCCC-ccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEE
Confidence 78899999999999999999998765542211 1111 11111111 3889999999864322
Q ss_pred CCCc--e---E-EEEeeeccCcccccCCCce-EEecCc-------------eEEecC---CCcccCCCcCC---------
Q psy14342 142 GLGF--A---L-WVLSSVYSGHHSILIPPSE-VEVNPA-------------LWLSAV---SQYRVRDTFCS--------- 189 (316)
Q Consensus 142 ~~~~--~---~-~~~~~~~~g~~~~~~~g~~-~i~d~~-------------l~v~~~---~gY~~~~~~~~--------- 189 (316)
.... . . +........+.|.++++++ .++|++ |+++|+ .|||++++.+.
T Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~ 652 (1389)
T TIGR03443 573 YFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFV 652 (1389)
T ss_pred EEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCccc
Confidence 1110 0 0 0000011224566899998 887742 999999 89999875442
Q ss_pred ------------------------------CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEE
Q psy14342 190 ------------------------------CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAV 235 (316)
Q Consensus 190 ------------------------------~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v 235 (316)
+|.|++++ |. +||.||+||++|+||+|.|||++|.+ ||.|.+++|
T Consensus 653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~-~p~V~~a~v 731 (1389)
T TIGR03443 653 DPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLSQ-HPLVRENVT 731 (1389)
T ss_pred CcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHHh-CcchheeEE
Confidence 14444433 33 99999999999999999999999999 999999988
Q ss_pred EeeC-----CcEEEEEEecCCchh-----------------------hcchHHHHHHHHHHhcCeeecEEEEEcCCCccc
Q psy14342 236 FTWT-----NLLVVVVELDGNESE-----------------------ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPI 287 (316)
Q Consensus 236 ~~~~-----~~~~~~v~~~~~~~~-----------------------~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~ 287 (316)
++.. +.+++++++...... ..+..+.+++.+.+.......+..++..+.||+
T Consensus 732 ~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~ 811 (1389)
T TIGR03443 732 LVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPL 811 (1389)
T ss_pred EEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCC
Confidence 8762 246666655421100 001233444444433222222233444559999
Q ss_pred CCCchhhHHHHHH
Q psy14342 288 NSRGEKQRMHLRD 300 (316)
Q Consensus 288 t~~gKi~r~~l~~ 300 (316)
|++||++|++|++
T Consensus 812 t~~GKidr~~L~~ 824 (1389)
T TIGR03443 812 NPNGKVDKPALPF 824 (1389)
T ss_pred CCCccccHhhcCC
Confidence 9999999999964
No 38
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=8.2e-38 Score=292.08 Aligned_cols=301 Identities=14% Similarity=0.123 Sum_probs=216.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc-CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE-LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~-~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+|.|+|||||||.||||++||+|+.+++.++...+. +.++|+.++.+|++|++..++.....+..|+++...
T Consensus 192 DlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~------ 265 (613)
T COG1022 192 DLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK------ 265 (613)
T ss_pred ceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec------
Confidence 6899999999999999999999999999999999997 999999999999999999987655555555555443
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHH-hhhhh-----------------------c----------------c
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHA-AVTSL-----------------------C----------------R 119 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~-~~~~~-----------------------~----------------~ 119 (316)
.++..++..+.++++|++..+|.++..+..... +.... . +
T Consensus 266 ~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~ 345 (613)
T COG1022 266 EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFR 345 (613)
T ss_pred CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHH
Confidence 368899999999999999999988764322111 10000 0 0
Q ss_pred c----------ccccc-----------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecC
Q psy14342 120 S----------MKLAC-----------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNP 171 (316)
Q Consensus 120 ~----------~~ls~-----------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~ 171 (316)
+ ..+++ .+.++||+||++...+..+| .....|..|.|+||++ ++.|.
T Consensus 346 Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~-----~~~~~gtvG~p~p~~evKI~d~ 420 (613)
T COG1022 346 KIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPP-----DRFVLGTVGKPLPGIEVKIADD 420 (613)
T ss_pred HHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEccc-----cCcccCCcCCcCCCceEEEccC
Confidence 0 00111 18899999999987776654 2233444455899999 88876
Q ss_pred c-eEEecC---CCcccCCCcCCC---CceeeecCc------------CCcccceeEE-CCcccChHhHHHHHHHhccccc
Q psy14342 172 A-LWLSAV---SQYRVRDTFCSC---NGALYQGAE------------RLALDETIML-RGMRYHPIDIENSVMRAHKKIA 231 (316)
Q Consensus 172 ~-l~v~~~---~gY~~~~~~~~~---d~g~~~~g~------------~GR~dd~i~~-~G~~v~p~eIE~~l~~~~p~v~ 231 (316)
. |++||| +|||++|++|++ ..||+++|+ +||.+|+|+. +|++|.|+.||+.+.+ +|.|.
T Consensus 421 GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~-~~~I~ 499 (613)
T COG1022 421 GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAK-SPLIE 499 (613)
T ss_pred ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhc-CCCee
Confidence 5 999999 999999999877 245554332 9999999997 9999999999999999 99999
Q ss_pred eeEEEeeCC-cEEEEEEecCCchh-------------h------cchHHHHHHHHHHhc------CeeecEEEEEcC---
Q psy14342 232 ECAVFTWTN-LLVVVVELDGNESE-------------A------LDLVPLVTNAVLEEH------HLIVGVAVVVDP--- 282 (316)
Q Consensus 232 ~~~v~~~~~-~~~~~v~~~~~~~~-------------~------~~l~~~~~~~l~~~~------~~~~~~~~~~~~--- 282 (316)
+++|++.++ .+.+++.+...... . ..+++.+...+.+-. ... ..+.+...
T Consensus 500 qi~vvg~~k~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i-~~~~~~~~~~t 578 (613)
T COG1022 500 QICVVGDDKKFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQI-KKFVLLPKEFT 578 (613)
T ss_pred EEEEEecCCcceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhh-heeeecccccc
Confidence 999999544 46666666543211 0 123333333222111 111 11222221
Q ss_pred -CCcccCCCchhhHHHHHHHHHcCCCCcchhhcc
Q psy14342 283 -GVVPINSRGEKQRMHLRDGFLADQLDPIYVAYN 315 (316)
Q Consensus 283 -~~lP~t~~gKi~r~~l~~~~~~~~~~~~~~~~~ 315 (316)
+.--.|++-|++|+.+.+.|.+ +++.+|....
T Consensus 579 ~~~~~~t~t~klkR~~i~~~~~~-~i~~~y~~~~ 611 (613)
T COG1022 579 PENGELTPTLKLKRHVILDRYKD-EIEAVYSRQS 611 (613)
T ss_pred cccCccccchhhhHHHHHHhhhh-HHHHHhhccc
Confidence 1234799999999999999986 8888876653
No 39
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=4.2e-37 Score=292.94 Aligned_cols=292 Identities=17% Similarity=0.128 Sum_probs=216.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|+++|+++..++......+++.++|+++.++|++|..|++..++.++..|+++++.+. .
T Consensus 198 ~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~ 273 (547)
T PRK13295 198 DVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDI----W 273 (547)
T ss_pred ceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCC----C
Confidence 579999999999999999999999998888888888999999999999999999988888999999999998753 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccccccc-----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLAC-----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls~-----------------e~~~~yG~te~~~~~ 140 (316)
++..+++.++++++++++.+|+++..+......... ..+.+-.++ .+++.||+||++...
T Consensus 274 ~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~ 353 (547)
T PRK13295 274 DPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVT 353 (547)
T ss_pred CHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCee
Confidence 688999999999999988888887655433221100 011111111 288899999986432
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC---------Cceeee
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC---------NGALYQ 196 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~---------d~g~~~ 196 (316)
....... .....++.|.+++|++ +++|++ |+++|+ .||+++++.+.. |.|+++
T Consensus 354 ~~~~~~~---~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~ 430 (547)
T PRK13295 354 LTKLDDP---DERASTTDGCPLPGVEVRVVDADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARID 430 (547)
T ss_pred eccCCCc---chhccCccccccCCcEEEEECCCCCCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEc
Confidence 2111000 0011124455889999 887754 899999 899999776532 455554
Q ss_pred c-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch-hhcchHHHHHH-H
Q psy14342 197 G-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES-EALDLVPLVTN-A 265 (316)
Q Consensus 197 ~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~~-~ 265 (316)
+ |. .||.||+||++|++|+|.|||++|.+ |+.|.+++|++.. +.+++++++.+... +.+++.+.+++ .
T Consensus 431 ~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~~ 509 (547)
T PRK13295 431 ADGYIRISGRSKDVIIRGGENIPVVEIEALLYR-HPAIAQVAIVAYPDERLGERACAFVVPRPGQSLDFEEMVEFLKAQK 509 (547)
T ss_pred CCceEEEEeccCCeEEECCEEECHHHHHHHHHh-CCCeeeEEEEeeecCCCCcEEEEEEEeCCCCCCCHHHHHHHHHhcc
Confidence 3 33 99999999999999999999999999 9999999999873 45777776654321 22455555554 2
Q ss_pred HHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 266 VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 266 l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+. .+..| ..+.+++ +||+|++||++|++|++.+.+
T Consensus 510 l~-~~~~P-~~i~~v~--~lP~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 510 VA-KQYIP-ERLVVRD--ALPRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred Cc-cccCC-cEEEEec--cCCCCCCccccHHHHHHHHhc
Confidence 33 33333 3455554 999999999999999988865
No 40
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-37 Score=289.35 Aligned_cols=292 Identities=13% Similarity=0.092 Sum_probs=218.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|.++|.++..++......+++.++|+++.++|++|.+|+...++.++..|+++++.+..
T Consensus 150 ~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~---- 225 (496)
T PRK06839 150 ASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF---- 225 (496)
T ss_pred CcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCC----
Confidence 5789999999999999999999999877766667788889999999999999999887778899999998886532
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhccccc---ccc----------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMK---LAC----------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~---ls~----------------e~~~~yG~te~~~~~~ 141 (316)
+|..+++.+++++++++..+|+++..+.............++ .++ .+.+.||+||++....
T Consensus 226 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~ 305 (496)
T PRK06839 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDRGFLFGQGFGMTETSPTVF 305 (496)
T ss_pred CHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHhCCeeEeeccCCCCCcceE
Confidence 688999999999999999999988766543321110011111 111 2778899999875322
Q ss_pred CCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC----------CCCceeee
Q psy14342 142 GLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC----------SCNGALYQ 196 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~----------~~d~g~~~ 196 (316)
...+.. .....++.|.|++|.+ +++|++ |+++|+ .|||++++.+ ++|.|+++
T Consensus 306 ~~~~~~---~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~ 382 (496)
T PRK06839 306 MLSEED---ARRKVGSIGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVD 382 (496)
T ss_pred eccccc---ccccCCCCcccCCCceEEEECCCcCCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEc
Confidence 111100 0112234455899999 888753 999999 8999987654 33666665
Q ss_pred c-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHHHHHH
Q psy14342 197 G-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLVTNAV 266 (316)
Q Consensus 197 ~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~~~l 266 (316)
+ |. .||.||+||.+|++|+|.|||++|.+ +|.|.+++|++.. +.+++++...+.. .+.+++.++++..+
T Consensus 383 ~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l 461 (496)
T PRK06839 383 EDGFVYIVGRKKEMIISGGENIYPLEVEQVINK-LSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRLFL 461 (496)
T ss_pred CCCcEEEeccccceEEECCEEECHHHHHHHHHh-CCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHhhC
Confidence 4 33 79999999999999999999999999 9999999999984 3466666665533 23356777777766
Q ss_pred HHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 267 LEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
. .+..| ..+.+++ ++|+|.+||++|++|++...+
T Consensus 462 ~-~~~~P-~~~~~v~--~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 462 A-KYKIP-KEIVFLK--ELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred c-CCCCC-cEEEEec--cCCCCccccccHHHHHHHhhc
Confidence 6 45554 4555554 899999999999999987654
No 41
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=3.2e-37 Score=290.68 Aligned_cols=300 Identities=12% Similarity=0.086 Sum_probs=210.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.++|+++..........+++..+|+++.++|++|..+++. ++.++..|+++++.++.. ..
T Consensus 142 ~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~-~~ 219 (502)
T TIGR01734 142 DNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMD-LYPCLASGGTLHCLDKDI-TN 219 (502)
T ss_pred CeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHH-HHHHHHCCCEEEEcCHHH-hc
Confidence 5789999999999999999999999988888888888889999999999999988876 889999999999886543 34
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
++..+++.+.+++++.+..+|+++..+........ ...+.+-.++ .+++.||+||++..
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 299 (502)
T TIGR01734 220 NFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVA 299 (502)
T ss_pred CHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEE
Confidence 78899999999999999899887654332211100 0011111111 27889999998643
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC--------------C
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS--------------C 190 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~--------------~ 190 (316)
.................+.+.++||++ +++|++ |+++|+ .||+++++.+. +
T Consensus 300 ~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TG 379 (502)
T TIGR01734 300 VTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTG 379 (502)
T ss_pred EEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECC
Confidence 221110000000011123455789999 888763 999999 89999876543 2
Q ss_pred CceeeecCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC------CcEEEEEEecCCchh-hcchHH
Q psy14342 191 NGALYQGAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT------NLLVVVVELDGNESE-ALDLVP 260 (316)
Q Consensus 191 d~g~~~~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~------~~~~~~v~~~~~~~~-~~~l~~ 260 (316)
|.|+++++. .||.||+|+++|++|+|.|||++|.+ +|.|.+|++++.. +.+++++........ ..++.+
T Consensus 380 Dlg~~~~~~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~-~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 458 (502)
T TIGR01734 380 DAGTITDGQLFYQGRLDFQIKLHGYRIELEDIEFNLRQ-SSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTK 458 (502)
T ss_pred CEEEEECCEEEEeccccCeEEECcEEeCHHHHHHHHHc-CCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHH
Confidence 555555444 89999999999999999999999999 9999999999852 345666655443222 123334
Q ss_pred HHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 261 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 261 ~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
++++.+.+.......+..++.++++|+|++||++|++|++.+.
T Consensus 459 ~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 459 AIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred HHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 4444444332221222333444599999999999999998764
No 42
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3.7e-37 Score=292.95 Aligned_cols=288 Identities=17% Similarity=0.141 Sum_probs=217.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.++|+++..........++++++|+++.++|++|.+++.. ++.++..|+++++.++.
T Consensus 181 ~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~-~~~~l~~G~~~~~~~~~---- 255 (542)
T PRK06155 181 DTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNA-FFQALLAGATYVLEPRF---- 255 (542)
T ss_pred CeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHH-HHHHHHcCceEEeeCCC----
Confidence 5799999999999999999999999888777788889999999999999999999886 78999999999987643
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhccccc--cc----------------ccccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMK--LA----------------CELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~--ls----------------~e~~~~yG~te~~~~~~~ 142 (316)
+|..+++.+++++++.++.+|+++..+.............+. ++ ..+++.||+||++.....
T Consensus 256 ~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~ 335 (542)
T PRK06155 256 SASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPGVPAALHAAFRERFGVDLLDGYGSTETNFVIAV 335 (542)
T ss_pred CHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcCCCHHHHHHHHHHcCCCEEeeecccccCccccC
Confidence 688999999999999999888877655433211000000010 01 138889999998754432
Q ss_pred CCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC------CCcccCCCcC----------CCCcee
Q psy14342 143 LGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV------SQYRVRDTFC----------SCNGAL 194 (316)
Q Consensus 143 ~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~------~gY~~~~~~~----------~~d~g~ 194 (316)
..+ ....+..+.+.+|++ +++|++ |+++|+ .||+++++.+ ++|.|+
T Consensus 336 ~~~------~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~ 409 (542)
T PRK06155 336 THG------SQRPGSMGRLAPGFEARVVDEHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVV 409 (542)
T ss_pred CCC------CCCCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEE
Confidence 211 112234445788998 887753 899985 7999887654 336666
Q ss_pred eec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCC-chhhcchHHHHHH
Q psy14342 195 YQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN-ESEALDLVPLVTN 264 (316)
Q Consensus 195 ~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~-~~~~~~l~~~~~~ 264 (316)
+++ |. .||.||+|+++|++|+|.|||++|.+ ||+|.+|+|+++. +.+.+++.+... ..+..++.+++++
T Consensus 410 ~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~-~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 488 (542)
T PRK06155 410 RDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLS-HPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPVALVRHCEP 488 (542)
T ss_pred EcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHh-CCCeeEEEEEeecccccCceEEEEEEECCCCCCCHHHHHHHHHh
Confidence 653 43 99999999999999999999999999 9999999999884 355666655443 2334567777877
Q ss_pred HHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 265 AVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 265 ~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+. .++.| ..+.+++ ++|+|++||++|++|++.+..
T Consensus 489 ~l~-~~~~P-~~i~~~~--~iP~t~~GKi~r~~l~~~~~~ 524 (542)
T PRK06155 489 RLA-YFAVP-RYVEFVA--ALPKTENGKVQKFVLREQGVT 524 (542)
T ss_pred hCc-CccCC-cEEEEec--cCCCCcccceeHHHHHhhccC
Confidence 776 55555 3555554 899999999999999997654
No 43
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.6e-37 Score=292.09 Aligned_cols=291 Identities=15% Similarity=0.158 Sum_probs=214.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc--CCC-CCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE--LYP-SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE 77 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~--~~~-~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~ 77 (316)
|+++|+|||||||.||+|.++|+++..........+. +.. .++++..+|++|.+++...++..+..|+++++....
T Consensus 208 d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~- 286 (562)
T PRK05677 208 DVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNP- 286 (562)
T ss_pred CEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCc-
Confidence 5799999999999999999999999877666555544 333 467788899999999877678888889887765432
Q ss_pred cccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhcc
Q psy14342 78 VEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCL 137 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~ 137 (316)
.++..+++.+++++++.++.+|+.+..+........ ...+.+-.++ .+++.||+||++
T Consensus 287 --~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~ 364 (562)
T PRK05677 287 --RDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETS 364 (562)
T ss_pred --ccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccC
Confidence 267889999999999999888888765543221100 0011111111 288899999986
Q ss_pred CCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC-----------C
Q psy14342 138 DPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC-----------N 191 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~-----------d 191 (316)
........ .....+..|.+++|.+ +++|++ |+++|+ .|||++++.+.. |
T Consensus 365 ~~~~~~~~-----~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD 439 (562)
T PRK05677 365 PVVSVNPS-----QAIQVGTIGIPVPSTLCKVIDDDGNELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGD 439 (562)
T ss_pred cceeecCc-----cCCCCCccCccCCCCEEEEECCCCCCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccc
Confidence 43322211 1112334556899999 888753 999999 899998776532 5
Q ss_pred ceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCC-chhhcchHHH
Q psy14342 192 GALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN-ESEALDLVPL 261 (316)
Q Consensus 192 ~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~-~~~~~~l~~~ 261 (316)
.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.++++++..+. ..+.+++.+.
T Consensus 440 lg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~-~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~ 518 (562)
T PRK05677 440 IALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAA-LPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLTKEQVMEH 518 (562)
T ss_pred eEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHh-CCCccEEEEEeccCccCCceEEEEEEeCCCCCCCHHHHHHH
Confidence 555553 33 99999999999999999999999999 9999999999873 356666655433 3345678888
Q ss_pred HHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 262 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++.+. .+..| ..+.+++ ++|+|++||++|++|++.+..
T Consensus 519 ~~~~l~-~~~~P-~~i~~v~--~iP~t~sGKi~r~~L~~~~~~ 557 (562)
T PRK05677 519 MRANLT-GYKVP-KAVEFRD--ELPTTNVGKILRRELRDEELK 557 (562)
T ss_pred HHHhhh-hccCC-cEEEEec--cCCCCCcccccHHHHHHHHHH
Confidence 888887 55555 4566665 899999999999999987654
No 44
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-36 Score=275.38 Aligned_cols=280 Identities=20% Similarity=0.157 Sum_probs=199.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.++|+++..........+ ...++++.++|++|.+|+.. ++.++..|++++++.... ..
T Consensus 36 d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~v~~~~~~-~~ 111 (358)
T PRK07824 36 DVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQV-LVRSVIAGSEPVELDVSA-GF 111 (358)
T ss_pred CeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHH-HHHHHHcCCeEEecCcCC-Cc
Confidence 689999999999999999999999988777655544 34567899999999999876 788999999988744222 22
Q ss_pred ChHHHHHHHhccce--eeEEecccchhhHHhhHHhhh--hhcccccccc----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRV--RDTFCSYGMLAGIKMSHAAVT--SLCRSMKLAC----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~--t~~~~~~~~~~~l~~~~~~~~--~~~~~~~ls~----------------e~~~~yG~te~~~~~ 140 (316)
++..+++.+++++. +....+|..+..+........ ...+.+-.++ .+++.||+||++...
T Consensus 112 ~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~~~~~ 191 (358)
T PRK07824 112 DPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAATAALAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSETSGGC 191 (358)
T ss_pred CHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccccCCcccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCccCCCc
Confidence 68889999999984 333334444432222111000 0001111111 378899999985321
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCceEEecC---CCcccCCCcCC---------CCceeeecCc---CCccc
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPALWLSAV---SQYRVRDTFCS---------CNGALYQGAE---RLALD 204 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~l~v~~~---~gY~~~~~~~~---------~d~g~~~~g~---~GR~d 204 (316)
...| .+++|++ ++.|++|+++|+ .|||+++.... +|.|++++|. .||.|
T Consensus 192 ------------~~~G---~~~~g~~v~i~~Gei~v~g~~~~~gY~~~~~~~~~~~~g~~~TGDl~~~~~g~l~i~GR~~ 256 (358)
T PRK07824 192 ------------VYDG---VPLDGVRVRVEDGRIALGGPTLAKGYRNPVDPDPFAEPGWFRTDDLGALDDGVLTVLGRAD 256 (358)
T ss_pred ------------CcCc---eeCCCCEEEecCCEEEEecCccccccCCCcccccccCCCceecccEEEEeCCEEEEEeccC
Confidence 1112 3689999 887777999999 89999765432 2556554443 99999
Q ss_pred ceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCC-chhhcchHHHHHHHHHHhcCeeecEEE
Q psy14342 205 ETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN-ESEALDLVPLVTNAVLEEHHLIVGVAV 278 (316)
Q Consensus 205 d~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~-~~~~~~l~~~~~~~l~~~~~~~~~~~~ 278 (316)
|+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++..... ....+++.+++++.+. .+..| ..+.
T Consensus 257 d~i~~~G~~v~p~eIE~~l~~-~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i~~~~~~~l~-~~~~P-~~i~ 333 (358)
T PRK07824 257 DAISTGGLTVLPQVVEAALAT-HPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEALRAHVARTLD-RTAAP-RELH 333 (358)
T ss_pred CeEEECCEEECHHHHHHHHHh-CCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHHHHHHHhhCc-cccCC-CEEE
Confidence 999999999999999999999 9999999999873 345555544432 2334567777777766 44444 4566
Q ss_pred EEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 279 VVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 279 ~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++ +||+|++||++|++|++.|.+
T Consensus 334 ~v~--~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 334 VVD--ELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred Eec--CCCCCCCccccHHHHHHHhhc
Confidence 665 899999999999999998864
No 45
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=3.5e-37 Score=297.14 Aligned_cols=304 Identities=10% Similarity=0.018 Sum_probs=217.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCC--CCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELY--PSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~--~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
|+++|+|||||||.||||++||+++..+.......++.. .+|++++++|++|.+|++..++.++..|+++++.+....
T Consensus 210 d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~ 289 (614)
T PRK08180 210 TIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPT 289 (614)
T ss_pred ceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCcc
Confidence 579999999999999999999999998888777777764 568999999999999988778899999999998653221
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhh----h---hhcccccccc-----------------------ccc
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV----T---SLCRSMKLAC-----------------------ELY 128 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~----~---~~~~~~~ls~-----------------------e~~ 128 (316)
..++..+++.++++++|+++.+|.++..+....... . ...+.+-.++ .++
T Consensus 290 ~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~ 369 (614)
T PRK08180 290 PGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMM 369 (614)
T ss_pred chhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceee
Confidence 223456788999999999999998876554322110 0 0011111111 256
Q ss_pred ccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc----eEEecC---CCcccCCCcCC-----------
Q psy14342 129 PSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA----LWLSAV---SQYRVRDTFCS----------- 189 (316)
Q Consensus 129 ~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~----l~v~~~---~gY~~~~~~~~----------- 189 (316)
+.||+||++.......+ .....+..|.++||++ +++|++ |+++|+ .|||++++.+.
T Consensus 370 ~~YG~TE~~~~~~~~~~-----~~~~~~svG~p~pg~~v~i~d~~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~T 444 (614)
T PRK08180 370 TGLGMTETAPSATFTTG-----PLSRAGNIGLPAPGCEVKLVPVGGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRS 444 (614)
T ss_pred eeecccccCCceEeccc-----ccCCCCcccCccCCcEEEEecCCCCcEEEEecCccchhhcCChhHhHhhcccCCceec
Confidence 78999998643321111 1112234556899999 888653 999999 89999876542
Q ss_pred CCceeee-----cCc---CCcccceeEE-CCcccC--hHhHHHHHHHhccccceeEEEeeCC-cEEEEEEecCCc-----
Q psy14342 190 CNGALYQ-----GAE---RLALDETIML-RGMRYH--PIDIENSVMRAHKKIAECAVFTWTN-LLVVVVELDGNE----- 252 (316)
Q Consensus 190 ~d~g~~~-----~g~---~GR~dd~i~~-~G~~v~--p~eIE~~l~~~~p~v~~~~v~~~~~-~~~~~v~~~~~~----- 252 (316)
+|.|+++ +|. +||.||+|++ +|++|+ |.|||.++.+ ||.|.+|+|++.++ .+.+++++.+..
T Consensus 445 GDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~-~p~V~~a~V~g~~~~~~~a~V~~~~~~~~~~~ 523 (614)
T PRK08180 445 GDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAG-APLVQDVVITGHDRDEIGLLVFPNLDACRRLA 523 (614)
T ss_pred cceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhc-CchhheEEEEcCCCCceEEEEEcCHHHHHHHH
Confidence 2666662 233 9999998885 798766 8899999999 99999999999964 566666665431
Q ss_pred -----------hhhcchHHHHHHHHHHhcCe------eecEEEEEcCCCccc------CCCchhhHHHHHHHHHcCCCCc
Q psy14342 253 -----------SEALDLVPLVTNAVLEEHHL------IVGVAVVVDPGVVPI------NSRGEKQRMHLRDGFLADQLDP 309 (316)
Q Consensus 253 -----------~~~~~l~~~~~~~l~~~~~~------~~~~~~~~~~~~lP~------t~~gKi~r~~l~~~~~~~~~~~ 309 (316)
.+.+++.+++++.+...... .+..+.+++ .+|+ |++||++|+++.+.|++ +++.
T Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~--~~p~~~~gk~t~~~~~~R~~~~~~y~~-~i~~ 600 (614)
T PRK08180 524 GLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLD--EPPSLDAGEITDKGYINQRAVLARRAA-LVEA 600 (614)
T ss_pred hhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEec--CCCCCccCccCccccccHHHHHHHhHH-HHHH
Confidence 13356788888877743310 234566665 5665 55678889999999998 8999
Q ss_pred chhh
Q psy14342 310 IYVA 313 (316)
Q Consensus 310 ~~~~ 313 (316)
+|..
T Consensus 601 lY~~ 604 (614)
T PRK08180 601 LYAD 604 (614)
T ss_pred HhCC
Confidence 9864
No 46
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=7e-37 Score=291.75 Aligned_cols=294 Identities=15% Similarity=0.096 Sum_probs=207.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCc---c
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS---E 77 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~---~ 77 (316)
++++|+|||||||.||+|.++|+++...+......+++.++|+.+.++|++|.++ +..|+++++.+.. .
T Consensus 175 ~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~--------~~~g~~~~~~~~~~~~~ 246 (552)
T PRK09274 175 DMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFG--------PALGMTSVIPDMDPTRP 246 (552)
T ss_pred CeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhh--------hhhCCeEEecCcccccc
Confidence 5799999999999999999999999998888888899999999999999877543 2457777765321 1
Q ss_pred cccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-------------------cccccccchh
Q psy14342 78 VEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-------------------ELYPSRHIAL 135 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-------------------e~~~~yG~te 135 (316)
...+|..+++.++++++++++.+|+++..+........ ...+.+-.++ .+++.||+||
T Consensus 247 ~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE 326 (552)
T PRK09274 247 ATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATE 326 (552)
T ss_pred cccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccc
Confidence 12368899999999999999999998876654332110 0011111111 2677899999
Q ss_pred ccCCCCCCCce-EE----EEeeeccCcccccCCCce-EEecC--------------------ceEEecC---CCcccCCC
Q psy14342 136 CLDPYCGLGFA-LW----VLSSVYSGHHSILIPPSE-VEVNP--------------------ALWLSAV---SQYRVRDT 186 (316)
Q Consensus 136 ~~~~~~~~~~~-~~----~~~~~~~g~~~~~~~g~~-~i~d~--------------------~l~v~~~---~gY~~~~~ 186 (316)
++......... .. ........+.|.++||++ +++|+ +|+++|+ .|||++++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~ 406 (552)
T PRK09274 327 ALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPE 406 (552)
T ss_pred cceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChH
Confidence 86432211100 00 000000113455899999 88762 1999999 89999876
Q ss_pred cCCC---------------Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC----CcEE
Q psy14342 187 FCSC---------------NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT----NLLV 243 (316)
Q Consensus 187 ~~~~---------------d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~----~~~~ 243 (316)
.+.. |.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.++
T Consensus 407 ~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~-~p~V~~~~v~~~~~~~~~~~~ 485 (552)
T PRK09274 407 ATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNT-HPGVKRSALVGVGVPGAQRPV 485 (552)
T ss_pred HhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHh-CcccceeEEEEeCCCCCceEE
Confidence 5432 4444433 32 99999999999999999999999999 9999999999884 3566
Q ss_pred EEEEecCCch-hhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccC--CCchhhHHHHHHHHHc
Q psy14342 244 VVVELDGNES-EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPIN--SRGEKQRMHLRDGFLA 304 (316)
Q Consensus 244 ~~v~~~~~~~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t--~~gKi~r~~l~~~~~~ 304 (316)
+++++.+... +.+++.+++++.+.. +..+.....++..++||+| ++||++|++|++.+..
T Consensus 486 ~~v~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~ 548 (552)
T PRK09274 486 LCVELEPGVACSKSALYQELRALAAA-HPHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAK 548 (552)
T ss_pred EEEEccCccccchHHHhhhhHHHHHh-cCCCcceeEEeccCCCCccccccccccHHHHHHHHHH
Confidence 7776665432 334577888887774 3333233444455589999 7999999999987765
No 47
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=7e-37 Score=289.19 Aligned_cols=286 Identities=17% Similarity=0.146 Sum_probs=214.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|.+||.++...+......+++.++|+++.++|++|.+|+.. ++.++..|+++++.++.
T Consensus 162 ~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~---- 236 (515)
T TIGR03098 162 DMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQ-LTTAFYVGATVVLHDYL---- 236 (515)
T ss_pred CeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHH-HHHHHHcCCEEEEcCCC----
Confidence 4789999999999999999999999988888888888999999999999999999876 88999999999987542
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhh--hhhcccccccc------------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV--TSLCRSMKLAC------------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~--~~~~~~~~ls~------------------e~~~~yG~te~~~~~ 140 (316)
++..+++.++++++|+++.+|+++..+....... ....+.+-.++ .+++.||+||++...
T Consensus 237 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 316 (515)
T TIGR03098 237 LPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRST 316 (515)
T ss_pred CHHHHHHHHHHcCCceEecChHHHHHHHhcccCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceE
Confidence 6889999999999999999999887654321110 00011111111 278899999986322
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC-----------------
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC----------------- 188 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~----------------- 188 (316)
...... .....++.|.+++|++ +++|++ |+++|+ .|||+++..+
T Consensus 317 ~~~~~~----~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~ 392 (515)
T TIGR03098 317 YLPPEE----VDRRPDSIGKAIPNAEVLVLREDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLP 392 (515)
T ss_pred eccccc----ccCCCCCcceecCCCEEEEECCCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCcccccccc
Confidence 111100 0112335556899999 777543 899999 8999976543
Q ss_pred -----CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee-----CCcEEEEEEecC-Cch
Q psy14342 189 -----SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDG-NES 253 (316)
Q Consensus 189 -----~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~-----~~~~~~~v~~~~-~~~ 253 (316)
++|.|++++ |. .||.||+|+.+|++|+|.|||++|.+ ||.|.+|+|++. +++++++++... ...
T Consensus 393 ~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~ 471 (515)
T TIGR03098 393 ELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYA-TGLVAEAVAFGVPDPTLGQAIVLVVTPPGGEEL 471 (515)
T ss_pred ccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhc-CCCeeEEEEEeccCcccCceEEEEEEeCCCCCC
Confidence 235666643 33 99999999999999999999999999 999999999986 346666665433 223
Q ss_pred hhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHH
Q psy14342 254 EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 300 (316)
Q Consensus 254 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~ 300 (316)
+.+++.+.+++.+. .+..| ..+.+++ ++|+|++||++|++|++
T Consensus 472 ~~~~l~~~l~~~l~-~~~~p-~~i~~v~--~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 472 DRAALLAECRARLP-NYMVP-ALIHVRQ--ALPRNANGKIDRKALAA 514 (515)
T ss_pred CHHHHHHHHHhhCc-cccCC-CEEEEec--cCCCCCCCCCcHHHhcc
Confidence 44677788877777 44444 4556655 89999999999999875
No 48
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-36 Score=283.93 Aligned_cols=284 Identities=18% Similarity=0.137 Sum_probs=212.6
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.++|+++...+..+...+++.++|+++..+|++|..|++..++.++..|+++++.+..
T Consensus 129 ~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~---- 204 (471)
T PRK07787 129 APALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRP---- 204 (471)
T ss_pred ceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCC----
Confidence 5799999999999999999999999998888888889999999999999999999998899999999999886532
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh--hcccccccc-----------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS--LCRSMKLAC-----------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~--~~~~~~ls~-----------------e~~~~yG~te~~~~~~ 141 (316)
++..+++.++ ++++++..+|..+..+......... ..+.+-..+ .+++.||+||++....
T Consensus 205 ~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 283 (471)
T PRK07787 205 TPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLS 283 (471)
T ss_pred CHHHHHHHHh-hCceEEEcchHHHHHHHhCccccccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCccee
Confidence 6889999999 9999999999887655432211000 001111111 2888999999864322
Q ss_pred CCCceEEEEeeeccCcccccCCCce-EEecC-------------ceEEecC---CCcccCCCcCCC-----------Cce
Q psy14342 142 GLGFALWVLSSVYSGHHSILIPPSE-VEVNP-------------ALWLSAV---SQYRVRDTFCSC-----------NGA 193 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~-------------~l~v~~~---~gY~~~~~~~~~-----------d~g 193 (316)
.... .....+..+.+++|.+ +++|+ +|+++|+ .|||++++.+.. |.|
T Consensus 284 ~~~~-----~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg 358 (471)
T PRK07787 284 TRAD-----GERRPGWVGLPLAGVETRLVDEDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVA 358 (471)
T ss_pred cCCC-----CcccCCcccccCCCcEEEEECCCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceE
Confidence 1110 0111223445788888 77753 2899998 899998766532 556
Q ss_pred eeec-Cc---CCcc-cceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHH
Q psy14342 194 LYQG-AE---RLAL-DETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVT 263 (316)
Q Consensus 194 ~~~~-g~---~GR~-dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~ 263 (316)
++++ |. .||. ||+++.+|++|+|.|||++|.. +|.|.+++|++.. +.+++++.... ..+.+++.+.++
T Consensus 359 ~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~a~v~~~~-~~~~~~l~~~l~ 436 (471)
T PRK07787 359 VVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLG-HPGVREAAVVGVPDDDLGQRIVAYVVGAD-DVAADELIDFVA 436 (471)
T ss_pred EEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHh-CCCcceEEEEcccccccCeEEEEEEEeCC-CCCHHHHHHHHH
Confidence 6643 43 8996 8999999999999999999999 9999999999883 45666666532 234456777777
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHH
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 300 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~ 300 (316)
+.+. .+..| ..+.+++ ++|+|++||++|++|++
T Consensus 437 ~~l~-~~~~P-~~i~~~~--~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 437 QQLS-VHKRP-REVRFVD--ALPRNAMGKVLKKQLLS 469 (471)
T ss_pred hhcc-cccCC-cEEEEec--cCCCCCCccccHHHhcc
Confidence 7777 44444 3555555 89999999999999875
No 49
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=9.3e-37 Score=340.97 Aligned_cols=305 Identities=21% Similarity=0.287 Sum_probs=223.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcC--CCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL--YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
|+|||+|||||||.||||++||+|+..++..+...+++ +++|+++.++|++|++|++..++.+++.|+++++.++..+
T Consensus 167 d~a~i~yTSGTTG~PKGV~lsH~~l~~~~~~~~~~~~~~~~~~d~~l~~lp~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 246 (4334)
T PRK05691 167 DIAFLQYTSGSTALPKGVQVSHGNLVANEQLIRHGFGIDLNPDDVIVSWLPLYHDMGLIGGLLQPIFSGVPCVLMSPAYF 246 (4334)
T ss_pred CeEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHhCCCCCCCceEEEeccchhhhHHHHHHHHHHHCCCEEEEeCcHHH
Confidence 68999999999999999999999999988888777777 8899999999999999998889999999999999998877
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc-------------------------------cc
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC-------------------------------EL 127 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~-------------------------------e~ 127 (316)
..+|..|++.++++++++.. .|++...+...... ......+++++ .+
T Consensus 247 ~~~p~~~~~~i~~~~~t~~~-~~~~~~~l~~~~~~-~~~~~~~~l~~lr~~~~gge~l~~~~~~~~~~~~~~~g~~~~~~ 324 (4334)
T PRK05691 247 LERPLRWLEAISEYGGTISG-GPDFAYRLCSERVS-ESALERLDLSRWRVAYSGSEPIRQDSLERFAEKFAACGFDPDSF 324 (4334)
T ss_pred hhCHHHHHHHHHHcCCEEec-CCchHHHHHHHhcC-HHHhcccccccceEEEECcccCCHHHHHHHHHHhhhcCCCcccc
Confidence 88999999999999999554 44443332221100 00011111111 16
Q ss_pred cccccchhccCCCCCCCc-----eEEEE-------e-----eeccCcccccCCCce-EEecCc------------eEEec
Q psy14342 128 YPSRHIALCLDPYCGLGF-----ALWVL-------S-----SVYSGHHSILIPPSE-VEVNPA------------LWLSA 177 (316)
Q Consensus 128 ~~~yG~te~~~~~~~~~~-----~~~~~-------~-----~~~~g~~~~~~~g~~-~i~d~~------------l~v~~ 177 (316)
++.||+||++...+.... ..... . ....++.|.++||++ +++|++ ||++|
T Consensus 325 ~~~YG~TE~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~Ivd~~~~~~~~~g~~GEl~v~G 404 (4334)
T PRK05691 325 FASYGLAEATLFVSGGRRGQGIPALELDAEALARNRAEPGTGSVLMSCGRSQPGHAVLIVDPQSLEVLGDNRVGEIWASG 404 (4334)
T ss_pred ccCcchhhheeeeecccCCCCCceEeecHhHHhcCCccCCCCCceeccCCccCCCEEEEEcCCCCcCCCCCCeEEEEecC
Confidence 679999998754332211 00000 0 000123455899999 999863 99999
Q ss_pred C---CCcccCCCcCCC--------------CceeeecCc---CCcccceeEECCcccChHhHHHHHHHhccccc---eeE
Q psy14342 178 V---SQYRVRDTFCSC--------------NGALYQGAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIA---ECA 234 (316)
Q Consensus 178 ~---~gY~~~~~~~~~--------------d~g~~~~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~---~~~ 234 (316)
| .|||++++.|.. |.|++++|. +||.||+||++|++|+|.|||++|.+ ++.+. .++
T Consensus 405 p~v~~GY~~~~~~T~~~f~~~~g~~w~rTGDlg~~~dG~l~i~GR~kd~iki~G~~v~p~eIE~~l~~-~~~v~~~~~~~ 483 (4334)
T PRK05691 405 PSIAHGYWRNPEASAKTFVEHDGRTWLRTGDLGFLRDGELFVTGRLKDMLIVRGHNLYPQDIEKTVER-EVEVVRKGRVA 483 (4334)
T ss_pred CccchhhcCChhhhHHHhhcCCCCceeecCCeEEEECCEEEEEeeecCEEEECCEecChHHHHHHHHh-cchhhcCCcEE
Confidence 9 999999887643 555555554 99999999999999999999999999 77664 244
Q ss_pred EEeeC---C-cEEEEEEecCC---chhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCC
Q psy14342 235 VFTWT---N-LLVVVVELDGN---ESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 307 (316)
Q Consensus 235 v~~~~---~-~~~~~v~~~~~---~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~ 307 (316)
++... + ...+..++... ....+++.+.+++.+.+.....+..+.+++...||+|++||++|++|++.|.++..
T Consensus 484 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~R~~l~~~~~~~~~ 563 (4334)
T PRK05691 484 AFAVNHQGEEGIGIAAEISRSVQKILPPQALIKSIRQAVAEACQEAPSVVLLLNPGALPKTSSGKLQRSACRLRLADGSL 563 (4334)
T ss_pred EEEeccCCCceEEEEEEechhhcccCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCCCCCCCccccHHHHHHHHHhccc
Confidence 44442 1 22333333221 12335788899999997766656678888878999999999999999999988765
Q ss_pred C
Q psy14342 308 D 308 (316)
Q Consensus 308 ~ 308 (316)
+
T Consensus 564 ~ 564 (4334)
T PRK05691 564 D 564 (4334)
T ss_pred c
Confidence 4
No 50
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=6.6e-37 Score=290.37 Aligned_cols=286 Identities=15% Similarity=0.134 Sum_probs=208.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhH-HHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFAL-WVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~-~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||+|.+||.++..++......+.+.++|+++.++|++|.+++.. .++.++..|+++++.++.
T Consensus 184 ~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~--- 260 (527)
T TIGR02275 184 EVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDP--- 260 (527)
T ss_pred ccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCC---
Confidence 5799999999999999999999999988888788888999999999999999999875 378899999999886532
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccccccc-----------------cccccccchhccCC
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLAC-----------------ELYPSRHIALCLDP 139 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls~-----------------e~~~~yG~te~~~~ 139 (316)
+|..+++.+++++++++..+|+++..+......... ..+.+-..+ .+++.||+||.+..
T Consensus 261 -~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~ 339 (527)
T TIGR02275 261 -SPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVN 339 (527)
T ss_pred -CHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCcc
Confidence 578899999999999999999887655433221100 011111111 28889999996532
Q ss_pred CCCCCceEEEEeeeccCcccccCC-Cce-EEecCc-----------eEEecC---CCcccCCCcCCC-----------Cc
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIP-PSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC-----------NG 192 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~-g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~-----------d~ 192 (316)
+...... .....++.|.+++ +.. +++|++ |+++|+ .|||++++.+.. |.
T Consensus 340 ~~~~~~~----~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl 415 (527)
T TIGR02275 340 YTRLDDP----AEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDL 415 (527)
T ss_pred ccCCCCc----cccccccCCCCCCCCceEEEECCCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCce
Confidence 2211100 0111223444664 566 666643 999999 899998765522 55
Q ss_pred eeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHH
Q psy14342 193 ALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVT 263 (316)
Q Consensus 193 g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~ 263 (316)
|++++ |. .||.||+|+++|++|+|.|||++|.+ ||.|.+++|++.. +.+++++++.....+..++.+.++
T Consensus 416 ~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~-~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~~~~~~l~~~l~ 494 (527)
T TIGR02275 416 VRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLA-HPAVHDAALVSMPDELLGEKSCAFIVVRDPALKAAQLRRFLR 494 (527)
T ss_pred EEEcCCccEEEEecccceeecCCEEECHHHHHHHHHh-CCCceEEEEEecCCcccccEEEEEEEECCCCCCHHHHHHHHH
Confidence 65543 43 99999999999999999999999999 9999999999984 356677666554334456666666
Q ss_pred HH-HHHhcCeeecEEEEEcCCCcccCCCchhhHHHHH
Q psy14342 264 NA-VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 299 (316)
Q Consensus 264 ~~-l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~ 299 (316)
+. +. .+..| ..+.+++ ++|+|++||++|++|+
T Consensus 495 ~~~l~-~~~~P-~~i~~v~--~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 495 ERGLA-EYKLP-DRVEFID--SLPLTAVGKIDKKALR 527 (527)
T ss_pred hCCCc-cccCC-CEEEEec--cCCCCCccceeHHhcC
Confidence 54 43 44444 4566665 8999999999999874
No 51
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-36 Score=285.87 Aligned_cols=290 Identities=16% Similarity=0.110 Sum_probs=218.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.+||+++...+......+++.++|+++.++|++|.+++.. ++.++..|+++++.+..
T Consensus 142 ~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~---- 216 (483)
T PRK03640 142 EVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSI-LMRSVIYGMRVVLVEKF---- 216 (483)
T ss_pred CeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHH-HHHHHhcCCEEEecCCC----
Confidence 5789999999999999999999999888777777789999999999999999999876 78999999999987642
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHH--hhhhhcccccccc----------------cccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHA--AVTSLCRSMKLAC----------------ELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~--~~~~~~~~~~ls~----------------e~~~~yG~te~~~~~~~ 142 (316)
++..+++.+++++++++..+|+++..+..... ......+.+-.++ .+++.||+||++.....
T Consensus 217 ~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 296 (483)
T PRK03640 217 DAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQSYGMTETASQIVT 296 (483)
T ss_pred CHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcCCCCCHHHHHHHHHhCCCeeeeeccCcccccccc
Confidence 68899999999999999999998876543221 1111111111111 28889999998654332
Q ss_pred CCceEEEEeeeccCcccccCCCce-EEecC----------ceEEecC---CCcccCCCcC----------CCCceeeec-
Q psy14342 143 LGFALWVLSSVYSGHHSILIPPSE-VEVNP----------ALWLSAV---SQYRVRDTFC----------SCNGALYQG- 197 (316)
Q Consensus 143 ~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~----------~l~v~~~---~gY~~~~~~~----------~~d~g~~~~- 197 (316)
..+.. .....++.|.+++|++ ++.|+ +|+++|+ .|||++++.+ ++|.+++++
T Consensus 297 ~~~~~---~~~~~~~vG~p~~~~~~~i~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~~ 373 (483)
T PRK03640 297 LSPED---ALTKLGSAGKPLFPCELKIEKDGVVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDEE 373 (483)
T ss_pred cCccc---ccccCCCcccccCCcEEEEecCCCcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcCC
Confidence 22210 1112344556899999 77764 3999999 8999987654 236666644
Q ss_pred Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeCC-----cEEEEEEecCCchhhcchHHHHHHHHHHh
Q psy14342 198 AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTN-----LLVVVVELDGNESEALDLVPLVTNAVLEE 269 (316)
Q Consensus 198 g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~~l~~~ 269 (316)
|. .||.||++|.+|.+|+|.|||++|.+ +|.|.++++++..+ .+++++... ...+.+++.+.+++.+. .
T Consensus 374 g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~-~~~v~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~-~ 450 (483)
T PRK03640 374 GFLYVLDRRSDLIISGGENIYPAEIEEVLLS-HPGVAEAGVVGVPDDKWGQVPVAFVVKS-GEVTEEELRHFCEEKLA-K 450 (483)
T ss_pred CCEEEeecccCeEEeCCEEECHHHHHHHHHh-CCCeeEEEEEeCCCcccCCceEEEEEeC-CCCCHHHHHHHHHHhcc-C
Confidence 43 99999999999999999999999999 99999999998742 344444433 23345677777777766 4
Q ss_pred cCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 270 HHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 270 ~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+..| ..+.++. ++|+|++||++|++|++.+.+
T Consensus 451 ~~~p-~~i~~~~--~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 451 YKVP-KRFYFVE--ELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred CCCC-cEEEEeC--CCCCCCccceeHHHHHHHHhh
Confidence 5554 3555554 899999999999999998864
No 52
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.2e-36 Score=282.03 Aligned_cols=280 Identities=15% Similarity=0.123 Sum_probs=210.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.+||++++.........++..++|+++.++|++|.+|+.. ++.++..|+++++.+.
T Consensus 136 ~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~-~~~~l~~G~~v~~~~~----- 209 (458)
T PRK09029 136 RLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGI-VWRWLYAGATLVVRDK----- 209 (458)
T ss_pred CeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHH-HHHHHhCCceEEeCCh-----
Confidence 5789999999999999999999999999888888899999999999999999999865 7788999999988653
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc----------------cccccccchhccCCCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC----------------ELYPSRHIALCLDPYCGLG 144 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~----------------e~~~~yG~te~~~~~~~~~ 144 (316)
..+++.+. +++.+..+|+++..+........ ..+.+-.++ .+++.||+||++.......
T Consensus 210 --~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~-~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~ 284 (458)
T PRK09029 210 --QPLEQALA--GCTHASLVPTQLWRLLDNRSEPL-SLKAVLLGGAAIPVELTEQAEQQGIRCWCGYGLTEMASTVCAKR 284 (458)
T ss_pred --HHHHHHHh--hceeeecChHHHHHHHhccccCC-cceEEEECCCCCCHHHHHHHHHcCCcEeccccccccCcceeccC
Confidence 23455553 67777777777655443322110 011111111 3888999999864322111
Q ss_pred ceEEEEeeeccCcccccCCCce-EEecCceEEecC---CCcccCCCcCC----------CCceeeecCc---CCccccee
Q psy14342 145 FALWVLSSVYSGHHSILIPPSE-VEVNPALWLSAV---SQYRVRDTFCS----------CNGALYQGAE---RLALDETI 207 (316)
Q Consensus 145 ~~~~~~~~~~~g~~~~~~~g~~-~i~d~~l~v~~~---~gY~~~~~~~~----------~d~g~~~~g~---~GR~dd~i 207 (316)
. ......|.+++|++ ++.+++|+++|+ .|||++++.+. +|.|++++|. .||.||+|
T Consensus 285 ~-------~~~~~~G~~~~~~~~~i~~gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~g~l~~~gR~~d~i 357 (458)
T PRK09029 285 A-------DGLAGVGSPLPGREVKLVDGEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDRGEWQNGELTILGRLDNLF 357 (458)
T ss_pred C-------CCCCCCCCCCCCCEEEEeCCEEEEecCceeeeeecCccccccccCCCccCCCCcEEEeCCEEEEecccccce
Confidence 0 01123445899999 899989999999 89998865442 2667777554 99999999
Q ss_pred EECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHHHHHHHhcCeeecEEEEEcC
Q psy14342 208 MLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDP 282 (316)
Q Consensus 208 ~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 282 (316)
|++|++|+|.|||++|.+ ||.|.+|+|++.. +.++++++... ..+.+++.+.+++++. .+..| ..+.+++
T Consensus 358 ~~~G~~v~p~eiE~~l~~-~~~v~~~~v~~~~~~~~~~~~~a~v~~~~-~~~~~~l~~~~~~~l~-~~~~P-~~~~~~~- 432 (458)
T PRK09029 358 FSGGEGIQPEEIERVINQ-HPLVQQVFVVPVADAEFGQRPVAVVESDS-EAAVVNLAEWLQDKLA-RFQQP-VAYYLLP- 432 (458)
T ss_pred eeCCEEeCHHHHHHHHhc-CCCcceEEEEccCCcccCceEEEEEEcCc-ccCHHHHHHHHHhhch-hccCC-eEEEEec-
Confidence 999999999999999999 9999999999883 45666666553 2344578888888777 55555 3455554
Q ss_pred CCcccCCCchhhHHHHHHHHHc
Q psy14342 283 GVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 283 ~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+|+|++||++|+.|++.+..
T Consensus 433 -~~p~t~~gKi~r~~L~~~~~~ 453 (458)
T PRK09029 433 -PELKNGGIKISRQALKEWVAQ 453 (458)
T ss_pred -ccccCcCCCcCHHHHHHHHHh
Confidence 799999999999999988775
No 53
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-36 Score=287.14 Aligned_cols=294 Identities=12% Similarity=0.007 Sum_probs=211.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|+++|+++..++..+...+++.++|+++.++|++|.++++..++.++..|+++++.++.
T Consensus 153 ~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~---- 228 (529)
T PRK07867 153 DLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKF---- 228 (529)
T ss_pred ceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCC----
Confidence 5789999999999999999999999988888888899999999999999999999988777889999999887532
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhccccc--ccc----------------cccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMK--LAC----------------ELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~--ls~----------------e~~~~yG~te~~~~~~~ 142 (316)
++..+++.+++++++.+...|+.+..+.............+. .++ .+++.||+||++.....
T Consensus 229 ~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~~~gg~~~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~ 308 (529)
T PRK07867 229 SASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRIVYGNEGAPGDIARFARRFGCVVVDGFGSTEGGVAITR 308 (529)
T ss_pred CHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEEEecCCCChHHHHHHHHHhCCcEEEeeccccccccccc
Confidence 578899999999999888888776544332221100000111 111 28889999998643221
Q ss_pred CCceEEEEeeeccCcccccCCCceEEe-----------------------cCceEE-ecC---CCcccCCCcCC------
Q psy14342 143 LGFALWVLSSVYSGHHSILIPPSEVEV-----------------------NPALWL-SAV---SQYRVRDTFCS------ 189 (316)
Q Consensus 143 ~~~~~~~~~~~~~g~~~~~~~g~~~i~-----------------------d~~l~v-~~~---~gY~~~~~~~~------ 189 (316)
... ...++.+.+++|++.+- .++|++ +|+ .|||++++.+.
T Consensus 309 ~~~-------~~~~~~g~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g 381 (529)
T PRK07867 309 TPD-------TPPGALGPLPPGVAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGG 381 (529)
T ss_pred CCC-------CCCCCcCCCCCCEEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCC
Confidence 110 01122233455533211 123787 998 89999876542
Q ss_pred ----CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhh
Q psy14342 190 ----CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEA 255 (316)
Q Consensus 190 ----~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~ 255 (316)
+|.|++++ |. .||.||+||++|+||+|.|||++|.+ ||+|.+|+|++.. +++++++.+.++. .+.
T Consensus 382 ~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~-~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~~ 460 (529)
T PRK07867 382 VYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLR-YPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFDP 460 (529)
T ss_pred eEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHh-CCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCCH
Confidence 25666644 33 99999999999999999999999999 9999999999984 3566666665442 233
Q ss_pred cchHHHHHHH--HHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCCcc
Q psy14342 256 LDLVPLVTNA--VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPI 310 (316)
Q Consensus 256 ~~l~~~~~~~--l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~~~ 310 (316)
+++.+.++.+ +. .+..| ..+.+++ ++|+|++||++|++|++...++.++.+
T Consensus 461 ~~l~~~~~~~~~l~-~~~~P-~~i~~~~--~iP~t~~GKv~r~~L~~~~~~~~~~~~ 513 (529)
T PRK07867 461 DAFAEFLAAQPDLG-PKQWP-SYVRVCA--ELPRTATFKVLKRQLSAEGVDCADPVW 513 (529)
T ss_pred HHHHHHHHhhccCC-cccCC-eEEEEee--ccCCCCCcceeHHHHHHhcCCCCCCee
Confidence 5566666543 33 33344 3555554 899999999999999999887666654
No 54
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-36 Score=287.50 Aligned_cols=289 Identities=12% Similarity=0.041 Sum_probs=208.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||||.++|+++..........+++.++|+++.++|++|.++++..++.++..|+++++.+..
T Consensus 151 ~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~---- 226 (540)
T PRK13388 151 DPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKF---- 226 (540)
T ss_pred CeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCC----
Confidence 5899999999999999999999999988888888899999999999999999999887666789999999886432
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhccccc--ccc----------------cccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMK--LAC----------------ELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~--ls~----------------e~~~~yG~te~~~~~~~ 142 (316)
++..+++.+++++++++...|..+..+.............+. +.+ .+++.||+||++.....
T Consensus 227 ~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~~G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~ 306 (540)
T PRK13388 227 SASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVAFGNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVR 306 (540)
T ss_pred CHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEEECCCCCHHHHHHHHHHhCCceecccccccccceeec
Confidence 578899999999999888777776544322211100000111 111 38889999998643321
Q ss_pred CCceEEEEeeeccCcccccCCCce-E-----------Eec------------CceEEe-cC---CCcccCCCcCC-----
Q psy14342 143 LGFALWVLSSVYSGHHSILIPPSE-V-----------EVN------------PALWLS-AV---SQYRVRDTFCS----- 189 (316)
Q Consensus 143 ~~~~~~~~~~~~~g~~~~~~~g~~-~-----------i~d------------~~l~v~-~~---~gY~~~~~~~~----- 189 (316)
.+ ....++.|.+++|++ . ++| ++|+++ |+ .|||++++.+.
T Consensus 307 -~~------~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~ 379 (540)
T PRK13388 307 -EP------GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERMRH 379 (540)
T ss_pred -CC------CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCcceEEEEecCCcccccccCChHHHHHHhhc
Confidence 11 011233444566655 2 111 128887 88 89999876553
Q ss_pred -----CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hh
Q psy14342 190 -----CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SE 254 (316)
Q Consensus 190 -----~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~ 254 (316)
+|.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++++.+.. .+
T Consensus 380 g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~-~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~ 458 (540)
T PRK13388 380 GMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLR-HPAINRVAVYAVPDERVGDQVMAALVLRDGATFD 458 (540)
T ss_pred CceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHh-CCCceEEEEEEccCCCCCceeEEEEEECCCCcCC
Confidence 25666643 33 99999999999999999999999999 9999999999984 3555656555432 23
Q ss_pred hcchHHHHHHH--HHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 255 ALDLVPLVTNA--VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 255 ~~~l~~~~~~~--l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
.+++.++++.+ +. .+..| ..+.+++ ++|+|++||++|++|++...+.
T Consensus 459 ~~~l~~~l~~~~~l~-~~~~P-~~~~~v~--~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 459 PDAFAAFLAAQPDLG-TKAWP-RYVRIAA--DLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred HHHHHHHHHhhccCC-cccCC-cEEEEec--cCCCCCcceeeHHhHHHhccCC
Confidence 34566666543 33 33333 4555555 9999999999999999987664
No 55
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-36 Score=284.79 Aligned_cols=291 Identities=14% Similarity=0.056 Sum_probs=217.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++++|||||||.||+|.++|+++...+......+++..+|+++.+.|++|.+++....+..+..|+++++.+..
T Consensus 150 ~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~---- 225 (497)
T PRK06145 150 DLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREF---- 225 (497)
T ss_pred ceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcC----
Confidence 5789999999999999999999999877666667788999999999999999999877677889999998886532
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
++..+++.++++++++++.+|+++..+......... ..+.+-.++ .+++.||+||++..
T Consensus 226 ~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~ 305 (497)
T PRK06145 226 DPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSG 305 (497)
T ss_pred CHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCc
Confidence 688999999999999999999988765433221100 011111111 27889999999753
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC----------CCCcee
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC----------SCNGAL 194 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~----------~~d~g~ 194 (316)
....... ......++.+.+++|++ ++.|++ |+++|+ .|||++++.+ ++|.|+
T Consensus 306 ~~~~~~~---~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~ 382 (497)
T PRK06145 306 DTLMEAG---REIEKIGSTGRALAHVEIRIADGAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGY 382 (497)
T ss_pred ceeccCc---cccccCCCcccCCCCceEEEECCCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEE
Confidence 3211110 00112234556899999 887653 999999 8999986654 336676
Q ss_pred eec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHHHH
Q psy14342 195 YQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLVTN 264 (316)
Q Consensus 195 ~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~~ 264 (316)
+++ |. +||.||+||++|++|+|.|||++|.+ +|.|.+++|++.. +.+++++++.+.. .+.+++.+.+++
T Consensus 383 ~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~ 461 (497)
T PRK06145 383 LDEEGFLYLTDRKKDMIISGGENIASSEVERVIYE-LPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQ 461 (497)
T ss_pred EcCCCcEEEeccccceEEeCCeEECHHHHHHHHHh-CCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHH
Confidence 654 43 89999999999999999999999999 9999999999873 4567777665432 234577788887
Q ss_pred HHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 265 AVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 265 ~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
.+. .+..| ..+.++ +++|+|++||++|++|++.+.
T Consensus 462 ~l~-~~~~p-~~i~~v--~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 462 RLA-SFKVP-RQLKVR--DELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred hhh-cCCCC-CEEEEe--ccCCCCCcccccHHHHHHHhc
Confidence 776 45554 345555 489999999999999998764
No 56
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.4e-37 Score=343.17 Aligned_cols=296 Identities=15% Similarity=0.128 Sum_probs=220.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+|||+|||||||+||||+++|+++.+.+......+++.++|+++.+.|++|+.+... ++.++..|+++++.+ . ...
T Consensus 3238 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~l~i~~-~-~~~ 3314 (3956)
T PRK12467 3238 NLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQER-FLWTLICGGCLVVRD-N-DLW 3314 (3956)
T ss_pred ceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHH-HHHHHhCCCEEEECC-c-ccC
Confidence 5799999999999999999999999999999999999999999999999999988766 899999999999876 2 234
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhh-hhhcccccccc------------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-TSLCRSMKLAC------------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-~~~~~~~~ls~------------------e~~~~yG~te~~~~~~ 141 (316)
+|..+++.++++++|++..+|+++..+....... ....+.+.+++ .+++.||+||++....
T Consensus 3315 ~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 3394 (3956)
T PRK12467 3315 DPEELWQAIHAHRISIACFPPAYLQQFAEDAGGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVT 3394 (3956)
T ss_pred CHHHHHHHHHHcCCEEEEcCHHHHHHHHhcccccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeE
Confidence 7899999999999999999999887654322110 00112222222 1788999999874322
Q ss_pred CCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC----------------
Q psy14342 142 GLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC---------------- 190 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~---------------- 190 (316)
...............+.|.|++|.+ +++|++ |+++|+ .|||++++.|+.
T Consensus 3395 ~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yr 3474 (3956)
T PRK12467 3395 LWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYR 3474 (3956)
T ss_pred EEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeec
Confidence 1110000000001124566899999 888754 999999 999999876543
Q ss_pred --Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC----CcEEEEEEecCC-chhhcchH
Q psy14342 191 --NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT----NLLVVVVELDGN-ESEALDLV 259 (316)
Q Consensus 191 --d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~----~~~~~~v~~~~~-~~~~~~l~ 259 (316)
|.|++++ |. +||.||+||++|.||.|.|||++|.+ ||+|.+|+|++.. +++++++..... ....+++.
T Consensus 3475 TGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~-~p~V~~a~v~~~~~~~~~~lva~v~~~~~~~~~~~~l~ 3553 (3956)
T PRK12467 3475 TGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQ-HPSVREAVVLARDGAGGKQLVAYVVPADPQGDWRETLR 3553 (3956)
T ss_pred cchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhh-CcccceEEEEEecCCCCcEEEEEEeCCCCCcccHHHHH
Confidence 4555543 43 99999999999999999999999999 9999999999873 467777766543 22334566
Q ss_pred HHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 260 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 260 ~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+.+++.++ .+..| ..+.++ +.||+|++||++|++|.+....
T Consensus 3554 ~~l~~~Lp-~y~vP-~~~~~l--~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3554 DHLAASLP-DYMVP-AQLLVL--AAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred HHHhccCC-hhhCC-Ceeeee--ccCCCCCCCccchhhcCCCCcc
Confidence 66666665 34444 344444 4899999999999999876544
No 57
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3e-36 Score=286.52 Aligned_cols=287 Identities=17% Similarity=0.113 Sum_probs=213.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|+++|+++...+......+++..+|+++.++|++|..|++..++.++..|+++++.+. .
T Consensus 196 ~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~----~ 271 (538)
T TIGR03208 196 DVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDI----W 271 (538)
T ss_pred CeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCc----c
Confidence 578999999999999999999999999888888888999999999999999999988888999999999988653 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~~~ 140 (316)
+|..+++.+++++++++...|+++..+........ ...+.+-.++ .+++.||+||++...
T Consensus 272 ~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 351 (538)
T TIGR03208 272 NPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVT 351 (538)
T ss_pred CHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCcc
Confidence 68899999999999998888888765443221100 0011111111 278899999986433
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC---------CCceeee
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS---------CNGALYQ 196 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~---------~d~g~~~ 196 (316)
....... .....++.|.++||++ +++|++ |+++|+ .|||++++.+. +|.|+++
T Consensus 352 ~~~~~~~---~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~ 428 (538)
T TIGR03208 352 VTEPDDA---LEKASTTDGRPLPGVEVKVIDANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQD 428 (538)
T ss_pred ccCcccc---hhhccCcccccCCCCEEEEECCCCCCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEEC
Confidence 2111110 0001123445899999 887653 999999 89999876543 2556664
Q ss_pred c-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHHHH-H
Q psy14342 197 G-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLVTN-A 265 (316)
Q Consensus 197 ~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~~-~ 265 (316)
+ |. +||.||+|+++|++|+|.|||++|.+ ||.|.+++|++.. +.+.+++++.+.. .+..++.+.++. .
T Consensus 429 ~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~-~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~~ 507 (538)
T TIGR03208 429 AEGYIRINGRSKDVIIRGGENIPVVEIENLLYQ-HPAVAQVAIVAYPDERLGERACAVVVPKPGCTLDFAAMVAFLKAQK 507 (538)
T ss_pred CCCcEEEEeccCceEEECCEEECHHHHHHHHhc-CcceeeEEEEeccCCCCCceEEEEEEECCCCCCCHHHHHHHHHhcc
Confidence 3 33 99999999999999999999999999 9999999999883 4567777665432 233566777764 3
Q ss_pred HHHhcCeeecEEEEEcCCCcccCCCchhhHHHHH
Q psy14342 266 VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 299 (316)
Q Consensus 266 l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~ 299 (316)
+. .+..| ..+.+++ ++|+|++||++|++|+
T Consensus 508 l~-~~~~P-~~i~~v~--~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 508 VA-LQYIP-ERLEVVD--ALPATPAGKIQKFRLR 537 (538)
T ss_pred hh-hccCC-cEEEEec--cCCCCCccccchHhhc
Confidence 44 44444 4566655 8999999999999986
No 58
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-36 Score=287.50 Aligned_cols=301 Identities=15% Similarity=0.101 Sum_probs=212.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHH--HHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM--KLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~--~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
|+++++|||||||.||+|.++|+++....... ...+++.++|+++.++|++|.+++.. .+.++..|+++++..+. +
T Consensus 182 ~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~l~~g~~~~~~~~~-~ 259 (576)
T PRK05620 182 TAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGV-PLAAFMSGTPLVFPGPD-L 259 (576)
T ss_pred ceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHH-HHHHHhcCceEEecCCC-C
Confidence 47899999999999999999999986654432 34577888999999999999999876 78899999999886543 2
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHH-hhhh--hcccccccc-----------------cccccccchhccC
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHA-AVTS--LCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~-~~~~--~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
+|..+++.++++++++++.+|+.+..+..... .... ..+.+-..+ .+++.||+||++.
T Consensus 260 --~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 337 (576)
T PRK05620 260 --SAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSP 337 (576)
T ss_pred --CHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeecccccccc
Confidence 68899999999999999999988765443221 1000 011111111 2788999999875
Q ss_pred CCCCCCc-eEEEEee--eccCcccccCCCce-EEecC------------ceEEecC---CCcccCCCcC-----------
Q psy14342 139 PYCGLGF-ALWVLSS--VYSGHHSILIPPSE-VEVNP------------ALWLSAV---SQYRVRDTFC----------- 188 (316)
Q Consensus 139 ~~~~~~~-~~~~~~~--~~~g~~~~~~~g~~-~i~d~------------~l~v~~~---~gY~~~~~~~----------- 188 (316)
......+ ....... ......+.+.+|++ +++|+ +|+++|+ .|||++++.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~ 417 (576)
T PRK05620 338 VGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVNDGQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGE 417 (576)
T ss_pred ceeeeccCCccccccccccccccCCcCCceeEEEecCCccccCCCCCceEEEEEcCcccccccCCccccccccccccccc
Confidence 3221111 0000000 00012233567777 66543 2899998 8999987655
Q ss_pred ----------------CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEE
Q psy14342 189 ----------------SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLV 243 (316)
Q Consensus 189 ----------------~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~ 243 (316)
++|.|++++ |. .||.||+|+.+|++|+|.|||++|.+ ||.|.+|+|++.. +.++
T Consensus 418 ~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~-~p~v~~~~vv~~~~~~~g~~~~ 496 (576)
T PRK05620 418 DVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMA-APEVVECAVIGYPDDKWGERPL 496 (576)
T ss_pred cchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhc-CCCceEEEEEeccCCCcCceeE
Confidence 124444433 32 99999999999999999999999999 9999999999883 3455
Q ss_pred EEEEecCCch----hhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCCcc
Q psy14342 244 VVVELDGNES----EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPI 310 (316)
Q Consensus 244 ~~v~~~~~~~----~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~~~ 310 (316)
+++.+.+... ..+++.+++++.+. .+..| ..+.+++ ++|+|++||++|++|++.+..++++.+
T Consensus 497 a~v~~~~~~~~~~~~~~~l~~~l~~~L~-~~~~P-~~i~~v~--~~P~t~~GKv~r~~L~~~~~~~~~~~~ 563 (576)
T PRK05620 497 AVTVLAPGIEPTRETAERLRDQLRDRLP-NWMLP-EYWTFVD--EIDKTSVGKFDKKDLRQHLADGDFEII 563 (576)
T ss_pred EEEEecCCCCcccccHHHHHHHHHhhCc-cccCC-eEEEEec--cCCCCCcccCcHHHHHHHHhcCCccEE
Confidence 5555554322 22456666666666 34444 4555555 899999999999999999998876543
No 59
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-36 Score=290.74 Aligned_cols=290 Identities=14% Similarity=0.092 Sum_probs=201.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|.+||+++..++......+++.++|+++.++|++|.+|++..++.++..|+++++.++.
T Consensus 200 ~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~---- 275 (600)
T PRK08279 200 DTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKF---- 275 (600)
T ss_pred ccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCC----
Confidence 5789999999999999999999999999988888899999999999999999999988777888889988886532
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhccccccc-c------------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLA-C------------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls-~------------------e~~~~yG~te~~~~~~ 141 (316)
++..+++.++++++|++..+|+++..+............++.+. + .+++.||+||++....
T Consensus 276 ~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~ 355 (600)
T PRK08279 276 SASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLMIGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFI 355 (600)
T ss_pred CHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEEecCCCCHHHHHHHHHHhCcceeeeeecccccceeec
Confidence 57788999999999999988888765443221110000011100 0 2788999999864221
Q ss_pred CCCceEEEEeeeccC--c---------------ccccCCCce---EEecC----ceE--EecC---CCcccCCCcC----
Q psy14342 142 GLGFALWVLSSVYSG--H---------------HSILIPPSE---VEVNP----ALW--LSAV---SQYRVRDTFC---- 188 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g--~---------------~~~~~~g~~---~i~d~----~l~--v~~~---~gY~~~~~~~---- 188 (316)
.... ...+.| + .+.++.+.. ..+.+ +|+ ++++ .|| +++..+
T Consensus 356 ~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~ 429 (600)
T PRK08279 356 NVFN-----FDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKI 429 (600)
T ss_pred ccCC-----CCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHH
Confidence 1000 000001 0 000111111 11111 144 5666 899 665433
Q ss_pred -------------CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC------CcEEEE
Q psy14342 189 -------------SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT------NLLVVV 245 (316)
Q Consensus 189 -------------~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~------~~~~~~ 245 (316)
++|.|++++ |. .||.||+||++|+||+|.|||++|.+ ||+|.+|+|+++. ...+++
T Consensus 430 ~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~-~p~V~~a~v~gv~~~~~~~~~~~~~ 508 (600)
T PRK08279 430 LRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSG-FPGVEEAVVYGVEVPGTDGRAGMAA 508 (600)
T ss_pred hhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhc-CCCcceEEEEEeecCCCCCccceeE
Confidence 225555553 43 99999999999999999999999999 9999999999873 223333
Q ss_pred EEecC-CchhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 246 VELDG-NESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 246 v~~~~-~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
+.... ...+.+++.+.+++++. .+..| ..+.+++ ++|+|++||++|++|++.+.+.
T Consensus 509 vv~~~~~~~~~~~l~~~l~~~L~-~~~~P-~~i~~v~--~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 509 IVLADGAEFDLAALAAHLYERLP-AYAVP-LFVRLVP--ELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred EEecCCccCCHHHHHHHHHhhCc-cccCC-eEEEeec--CCCCCcchhhhHHHHhhcCCCc
Confidence 33332 23344678888887776 55555 4555555 8999999999999999887764
No 60
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-35 Score=285.18 Aligned_cols=305 Identities=18% Similarity=0.240 Sum_probs=206.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHH-hc-----CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA-CE-----LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 74 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~-~~-----~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 74 (316)
|+++|+|||||||.||||.++|+++..++...... +. ..++++++.++|++|.+|++..++.+++.|+++++.+
T Consensus 161 d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 240 (578)
T PRK05850 161 STAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTS 240 (578)
T ss_pred CeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeC
Confidence 57999999999999999999999998876655432 22 3457899999999999999888999999999999987
Q ss_pred CcccccChHHHHHHHhccceeeEEecccchhhHHhhH---Hhhh----hhcccccccc----------------------
Q psy14342 75 PSEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSH---AAVT----SLCRSMKLAC---------------------- 125 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~---~~~~----~~~~~~~ls~---------------------- 125 (316)
+..+..+|..|++.+++++++ ++..|+.+..+.... .... ...+.+-..+
T Consensus 241 ~~~~~~~p~~~~~~i~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 319 (578)
T PRK05850 241 PVAFLQRPARWMQLLASNPHA-FSAAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRE 319 (578)
T ss_pred HHHHHHCHHHHHHHHHHcCCe-EEeCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCc
Confidence 765556899999999999998 456666543322210 0000 0001000000
Q ss_pred -cccccccchhccCCCCCCCc----e-EEEE-eeecc----------C----cccccCCCce-EEecCc-----------
Q psy14342 126 -ELYPSRHIALCLDPYCGLGF----A-LWVL-SSVYS----------G----HHSILIPPSE-VEVNPA----------- 172 (316)
Q Consensus 126 -e~~~~yG~te~~~~~~~~~~----~-~~~~-~~~~~----------g----~~~~~~~g~~-~i~d~~----------- 172 (316)
.+++.||+||++.......+ . .... ..... | ..+.+. +.+ +++|++
T Consensus 320 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~G 398 (578)
T PRK05850 320 TAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVG 398 (578)
T ss_pred ccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEE
Confidence 15678999997632221110 0 0000 00000 1 001122 345 666642
Q ss_pred -eEEecC---CCcccCCCcCC----------------------CCceeeecCc---CCcccceeEECCcccChHhHHHHH
Q psy14342 173 -LWLSAV---SQYRVRDTFCS----------------------CNGALYQGAE---RLALDETIMLRGMRYHPIDIENSV 223 (316)
Q Consensus 173 -l~v~~~---~gY~~~~~~~~----------------------~d~g~~~~g~---~GR~dd~i~~~G~~v~p~eIE~~l 223 (316)
||++|+ .|||++++.+. +|.|++++|. .||.||+||++|++|+|.|||++|
T Consensus 399 el~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l 478 (578)
T PRK05850 399 EIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFISEGELFIVGRIKDLLIVDGRNHYPDDIEATI 478 (578)
T ss_pred EEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEECCEEEEEcccccEEEECCeecCHHHHHHHH
Confidence 999999 89999876543 1445555554 999999999999999999999999
Q ss_pred HHhccccceeEEEeeC----CcEEEEEEecCCchhh-------cchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCch
Q psy14342 224 MRAHKKIAECAVFTWT----NLLVVVVELDGNESEA-------LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGE 292 (316)
Q Consensus 224 ~~~~p~v~~~~v~~~~----~~~~~~v~~~~~~~~~-------~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gK 292 (316)
.+ ||.+ +++|+++. +.+++++++....... ..+.+++...+.......+..+.++..+.||+|++||
T Consensus 479 ~~-~~~~-~~~v~~v~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GK 556 (578)
T PRK05850 479 QE-ITGG-RVAAISVPDDGTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIPITTSGK 556 (578)
T ss_pred HH-hcCC-cEEEEEecCCCceEEEEEEEeccccCcchhhhhhHHHHHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCch
Confidence 99 9986 47777773 4577777766543211 2334444444443334444567787777899999999
Q ss_pred hhHHHHHHHHHcCCCCc
Q psy14342 293 KQRMHLRDGFLADQLDP 309 (316)
Q Consensus 293 i~r~~l~~~~~~~~~~~ 309 (316)
++|++|+++|.++++..
T Consensus 557 i~R~~l~~~~~~~~~~~ 573 (578)
T PRK05850 557 IRRAACVEQYRQDEFTR 573 (578)
T ss_pred HHHHHHHHHHHcCCccc
Confidence 99999999999877554
No 61
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=5.5e-36 Score=284.62 Aligned_cols=290 Identities=16% Similarity=0.143 Sum_probs=212.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhH-HHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFAL-WVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~-~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||+|.+||+++...+......++++++|+++.++|++|.+++.. .++.++..|+++++.+..
T Consensus 183 ~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~--- 259 (536)
T PRK10946 183 EVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDP--- 259 (536)
T ss_pred CeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECCCC---
Confidence 5799999999999999999999999999888888899999999999999999988764 478889999999886533
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhh--h---hhcccccccc-----------------cccccccchhcc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV--T---SLCRSMKLAC-----------------ELYPSRHIALCL 137 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~--~---~~~~~~~ls~-----------------e~~~~yG~te~~ 137 (316)
++..+++.+++++++++..+|+.+..+....... . ...+.+-..+ .+++.||+||+.
T Consensus 260 -~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~ 338 (536)
T PRK10946 260 -SATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGL 338 (536)
T ss_pred -CHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccccc
Confidence 5778899999999999999998876554331110 0 0001111111 278899999964
Q ss_pred CCCCCCCceEEEEeeeccCcccccC-CCce-EEecCc-----------eEEecC---CCcccCCCcCCC-----------
Q psy14342 138 DPYCGLGFALWVLSSVYSGHHSILI-PPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC----------- 190 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~~~~~-~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~----------- 190 (316)
..+...... .....++.+.++ |+.. ++.|++ |+++|+ .|||++++.+..
T Consensus 339 ~~~~~~~~~----~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TG 414 (536)
T PRK10946 339 VNYTRLDDS----DERIFTTQGRPMSPDDEVWVADADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSG 414 (536)
T ss_pred eeeecCCCc----cccccccCCcccCCCceEEEECCCCCCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecC
Confidence 322211100 001112334456 6777 676643 999999 899998766532
Q ss_pred Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHH
Q psy14342 191 NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPL 261 (316)
Q Consensus 191 d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~ 261 (316)
|.|++++ |. .||.||+|+++|++|+|.|||++|.+ ||.|.+++|++.. +.+++++++... .+.+++.+.
T Consensus 415 Dl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~-~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~-~~~~~l~~~ 492 (536)
T PRK10946 415 DLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLR-HPAVIHAALVSMEDELMGEKSCAFLVVKEP-LKAVQLRRF 492 (536)
T ss_pred ceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHh-CCCcceEEEEcCCCcccCceEEEEEEeCCC-CCHHHHHHH
Confidence 5555543 43 99999999999999999999999999 9999999999884 356666666544 444567777
Q ss_pred HHHH-HHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 262 VTNA-VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 262 ~~~~-l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++. +. .+..| ..+.+++ ++|+|++||++|++|++.+..
T Consensus 493 ~~~~~l~-~~~~P-~~~~~~~--~iP~t~~GKv~r~~L~~~~~~ 532 (536)
T PRK10946 493 LREQGIA-EFKLP-DRVECVD--SLPLTAVGKVDKKQLRQWLAS 532 (536)
T ss_pred HHhCCcc-ccccC-cEEEEec--cCCCCCCCcccHHHHHHHHHh
Confidence 7654 44 44444 4555554 899999999999999988765
No 62
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.4e-36 Score=311.93 Aligned_cols=294 Identities=13% Similarity=0.054 Sum_probs=214.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.+||+++..++......+++.++|+++..+|++|.+|+...++.++..|+++++.+.. .
T Consensus 783 ~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~---~ 859 (1146)
T PRK08633 783 DTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDP---T 859 (1146)
T ss_pred CEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCC---C
Confidence 6899999999999999999999999998888888899999999999999999999988788999999999886532 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~~~ 140 (316)
++..+++.++++++|++..+|+++..+.......+ ...+.+-.++ ++++.||+||++...
T Consensus 860 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~ 939 (1146)
T PRK08633 860 DALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVA 939 (1146)
T ss_pred CHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceE
Confidence 67899999999999999999998875544221100 0011111111 388899999986543
Q ss_pred CCCCceE-----EEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcCCC---------
Q psy14342 141 CGLGFAL-----WVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFCSC--------- 190 (316)
Q Consensus 141 ~~~~~~~-----~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~~~--------- 190 (316)
....+.. +.......++.|.|+||.+ +++|++ |+++|+ .|||++++.+.+
T Consensus 940 ~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~ 1019 (1146)
T PRK08633 940 SVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIG 1019 (1146)
T ss_pred EEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCC
Confidence 2221110 0001112345566899999 888852 999999 899998876532
Q ss_pred -----Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhcc--ccceeEEEeeC-----CcEEEEEEecCCchh
Q psy14342 191 -----NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHK--KIAECAVFTWT-----NLLVVVVELDGNESE 254 (316)
Q Consensus 191 -----d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p--~v~~~~v~~~~-----~~~~~~v~~~~~~~~ 254 (316)
|.|++++ |. .||.||+||++|++|+|.|||++|.+ || .+.+++|++.. +.++++++.. ..+
T Consensus 1020 ~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~-~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~--~~~ 1096 (1146)
T PRK08633 1020 WYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAK-ALGGEEVVFAVTAVPDEKKGEKLVVLHTCG--AED 1096 (1146)
T ss_pred eEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHh-ccCCCCceEEEEeccCCCCCcEEEEEEecC--ccC
Confidence 4444443 32 89999999999999999999999999 99 45678888873 3566665542 223
Q ss_pred hcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 255 ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 255 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
.+++.+.+++.....+..| ..+.+++ ++|+|++||++|++|++...
T Consensus 1097 ~~~l~~~~~~~~l~~~~~P-~~i~~~~--~iP~t~~GKi~r~~L~~~~~ 1142 (1146)
T PRK08633 1097 VEELKRAIKESGLPNLWKP-SRYFKVE--ALPLLGSGKLDLKGLKELAL 1142 (1146)
T ss_pred HHHHHHHHHhcCCCcccCC-cEEEEec--CcCCCCCCCCcHHHHHHHHH
Confidence 3456665554322244444 3455555 89999999999999998644
No 63
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-36 Score=287.74 Aligned_cols=291 Identities=17% Similarity=0.174 Sum_probs=214.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc-CC-CCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE-LY-PSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~-~~-~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
++++|+|||||||.||+|.+||+++..++......+. +. .+|+++.++|++|.+|+...++.++..|+++++.++.
T Consensus 220 ~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~-- 297 (573)
T PRK05605 220 DVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAP-- 297 (573)
T ss_pred CEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCC--
Confidence 5789999999999999999999999887665444433 33 4688999999999999988788889999999987643
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccC
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
++..+++.+++++++++..+|..+..+........ ...+.+-.++ .+++.||+||++.
T Consensus 298 --~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~ 375 (573)
T PRK05605 298 --DIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSP 375 (573)
T ss_pred --CHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhch
Confidence 68899999999999999999998876554322110 0011111111 2888999999875
Q ss_pred CCCCCCceEEEEeeeccCcccccCCCce-EEecCc-------------eEEecC---CCcccCCCcCC----------CC
Q psy14342 139 PYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-------------LWLSAV---SQYRVRDTFCS----------CN 191 (316)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-------------l~v~~~---~gY~~~~~~~~----------~d 191 (316)
........ .....++.|.++||.. +++|++ |+++|+ .||+++++.+. +|
T Consensus 376 ~~~~~~~~----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD 451 (573)
T PRK05605 376 IIVGNPMS----DDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGD 451 (573)
T ss_pred hhhcCCcc----cCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCC
Confidence 43322210 1112234556899988 777631 899998 89999865543 36
Q ss_pred ceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHH
Q psy14342 192 GALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPL 261 (316)
Q Consensus 192 ~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~ 261 (316)
.|++++ |. .||.||+||++|++|+|.|||++|.. |+.|.+++|++.. +.+++++++.+.. .+.+++.+.
T Consensus 452 ~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~-~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~ 530 (573)
T PRK05605 452 VVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLRE-HPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALDPEGLRAY 530 (573)
T ss_pred EEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHh-CcccceEEEEeeecccCCeEEEEEEEECCCCCCCHHHHHHH
Confidence 666654 33 99999999999999999999999999 9999999999873 4667766665432 234567777
Q ss_pred HHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 262 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++.+. .+..| ..+.+++ ++|+|++||++|++|++.+.+
T Consensus 531 ~~~~l~-~~~~p-~~i~~~~--~iP~t~~GKi~r~~L~~~~~~ 569 (573)
T PRK05605 531 CREHLT-RYKVP-RRFYHVD--ELPRDQLGKVRRREVREELLE 569 (573)
T ss_pred HHHhCc-cccCC-cEEEEec--cCCCCCcccccHHHHHHHHHH
Confidence 776666 44444 3455554 899999999999999998864
No 64
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.3e-36 Score=281.00 Aligned_cols=294 Identities=14% Similarity=0.135 Sum_probs=215.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.++|+++...+..+...+.+.++|++++.+|++|.+|++..++.++..|+++++.+..
T Consensus 136 ~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~---- 211 (488)
T PRK09088 136 RVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGF---- 211 (488)
T ss_pred CceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCC----
Confidence 4789999999999999999999999888777777778888999999999999999988788889999998886532
Q ss_pred ChHHHHHHHh--ccceeeEEecccchhhHHhhHHhhh---hhcccccccc----------------cccccccchhccCC
Q psy14342 81 NPALWLSAVS--QYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC----------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~--~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~----------------e~~~~yG~te~~~~ 139 (316)
.+..++..+. ++++++++.+|.++..+........ ...+.+-.++ .+++.||+||++..
T Consensus 212 ~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~YG~TE~~~~ 291 (488)
T PRK09088 212 EPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDDGIPMVDGFGMSEAGTV 291 (488)
T ss_pred CHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHhCCceeeeecccccccc
Confidence 4667777775 4889988888888765543221100 0011111111 38889999999753
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC-----------CCce
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS-----------CNGA 193 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~-----------~d~g 193 (316)
........ ......++.+.++||++ ++.|++ |+++|+ .|||++++.+. +|.|
T Consensus 292 ~~~~~~~~--~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~ 369 (488)
T PRK09088 292 FGMSVDCD--VIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIA 369 (488)
T ss_pred cccCCCcc--cccccCCccccCCCCcEEEEECCCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceE
Confidence 22111000 00112345556899999 887642 999999 89999876542 2666
Q ss_pred eeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch-hhcchHHHHH
Q psy14342 194 LYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES-EALDLVPLVT 263 (316)
Q Consensus 194 ~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~ 263 (316)
++++ |. .||.||+|+.+|++|+|.|||++|.+ ||.|.+++|++.. +..++++++.+... +.+++.+.++
T Consensus 370 ~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~ 448 (488)
T PRK09088 370 RRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLAD-HPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLS 448 (488)
T ss_pred EEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHh-CCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHH
Confidence 6654 43 99999999999999999999999999 9999999999874 34566666554322 3456777787
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
+.+. .+..| ..+.+++ +||+|++||++|++|++.+.++
T Consensus 449 ~~l~-~~~~p-~~i~~~~--~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 449 TRLA-KYKVP-KHLRLVD--ALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred hhCc-CCCCC-CEEEEcc--cCCCCCCCceeHHHHHHHHHhc
Confidence 7776 45554 4555554 8999999999999999998764
No 65
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-36 Score=283.03 Aligned_cols=292 Identities=15% Similarity=0.143 Sum_probs=220.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|.+||+++..+.......+++.++|+++.++|++|.+|+...++..+..|+++++.+..
T Consensus 172 ~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~---- 247 (523)
T PRK08316 172 DLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDAP---- 247 (523)
T ss_pred CeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecCC----
Confidence 4789999999999999999999999988888888889999999999999999999877667788999999997643
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
++..+++.+++++++++..+|..+..+........ ...+.+..++ .+++.||+||++..
T Consensus 248 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 327 (523)
T PRK08316 248 DPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPL 327 (523)
T ss_pred CHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCcc
Confidence 68899999999999999998988765543322110 0011111111 38889999998754
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC----------CCCcee
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC----------SCNGAL 194 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~----------~~d~g~ 194 (316)
.....+.. .....++.|.++++.+ ++.|++ |+++|+ .||+++++.+ ++|.|+
T Consensus 328 ~~~~~~~~---~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~ 404 (523)
T PRK08316 328 ATVLGPEE---HLRRPGSAGRPVLNVETRVVDDDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGV 404 (523)
T ss_pred ccccCccc---cccccCCcccCCCCcEEEEEcCCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEE
Confidence 33222110 1111234456889998 787743 899998 8999886543 336777
Q ss_pred eec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHHHH
Q psy14342 195 YQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLVTN 264 (316)
Q Consensus 195 ~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~~ 264 (316)
+++ |. .||.||+|+++|++|+|.+||+.|.+ +|.|.+++|++.. +.++++++..+.. .+.+++.+.+++
T Consensus 405 ~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~ 483 (523)
T PRK08316 405 MDEEGYITVVDRKKDMIKTGGENVASREVEEALYT-HPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDELIAHCRA 483 (523)
T ss_pred EcCCceEEEecccccEEEeCCeEECHHHHHHHHHh-CCChheEeEecccCcccCCeEEEEEEECCCCCCCHHHHHHHHHH
Confidence 754 33 99999999999999999999999999 9999999999873 4577777766543 233567777777
Q ss_pred HHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 265 AVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 265 ~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+. .+..| ..+.++ +++|+|++||++|++|++.|.+
T Consensus 484 ~l~-~~~~p-~~i~~v--~~~p~t~~gKi~r~~l~~~~~~ 519 (523)
T PRK08316 484 RLA-GFKVP-KRVIFV--DELPRNPSGKILKRELRERYAG 519 (523)
T ss_pred hcc-cCCCC-cEEEEe--cCCCCCCccceeHHHHHHHHHh
Confidence 766 45454 345555 4899999999999999999875
No 66
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-36 Score=295.36 Aligned_cols=299 Identities=11% Similarity=0.054 Sum_probs=207.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHh--cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC--ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~--~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
|+|+|+|||||||.||||++||+|+.+.+....... ...+.|++++++|++|+++++. .+.+++.|+++++.+.
T Consensus 305 d~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~-~~~~l~~G~~i~~~~~--- 380 (746)
T PTZ00342 305 FITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI-AYLSFMLGGTINIWSK--- 380 (746)
T ss_pred ceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC---
Confidence 589999999999999999999999998876654432 1235589999999999999976 6778999999998742
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHH-------hhhh----------------------------------h
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHA-------AVTS----------------------------------L 117 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~-------~~~~----------------------------------~ 117 (316)
+|..+++.++++++|+++.+|.++..+..... .... .
T Consensus 381 --~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~ 458 (746)
T PTZ00342 381 --DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDK 458 (746)
T ss_pred --CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHh
Confidence 57889999999999999999988865533100 0000 0
Q ss_pred -ccccc--ccc------------------cccccccchhccCCCCCCCceEEEEeeeccCcccccC-CCce-EEec----
Q psy14342 118 -CRSMK--LAC------------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILI-PPSE-VEVN---- 170 (316)
Q Consensus 118 -~~~~~--ls~------------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g~~-~i~d---- 170 (316)
...+. +++ .+.+.||+||++.......+. ....|..|.|+ ||++ +++|
T Consensus 459 lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~-----~~~~gsvG~p~~pg~e~ki~d~~~~ 533 (746)
T PTZ00342 459 VNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHAD-----DNNTESIGGPISPNTKYKVRTWETY 533 (746)
T ss_pred hCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCC-----CCCcccccCcCCCcEEEEEeccccc
Confidence 00111 111 177899999987544333221 12234445577 9999 8875
Q ss_pred --------CceEEecC---CCcccCCCcCCC-----------Cceeeec-Cc---CCcccceeEE-CCcccChHhHHHHH
Q psy14342 171 --------PALWLSAV---SQYRVRDTFCSC-----------NGALYQG-AE---RLALDETIML-RGMRYHPIDIENSV 223 (316)
Q Consensus 171 --------~~l~v~~~---~gY~~~~~~~~~-----------d~g~~~~-g~---~GR~dd~i~~-~G~~v~p~eIE~~l 223 (316)
++|+++|| .|||++++.|++ |.|.+++ |. +||.||+||+ +|++|+|.+||++|
T Consensus 534 ~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l 613 (746)
T PTZ00342 534 KATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLY 613 (746)
T ss_pred ccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHH
Confidence 13999999 899999887754 3344432 32 9999999995 79999999999999
Q ss_pred HHhccccceeEEEeeCC--cEEEEEEecCCc------------------hhh-----------cchHHHHHHHHHHh---
Q psy14342 224 MRAHKKIAECAVFTWTN--LLVVVVELDGNE------------------SEA-----------LDLVPLVTNAVLEE--- 269 (316)
Q Consensus 224 ~~~~p~v~~~~v~~~~~--~~~~~v~~~~~~------------------~~~-----------~~l~~~~~~~l~~~--- 269 (316)
.+ ||.|.+|+|+|... .+++++.+.+.. .+. .++.+.+.+.+.+.
T Consensus 614 ~~-~p~V~~~~VvG~~~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 692 (746)
T PTZ00342 614 SQ-ISFINFCVVYGDDSMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKK 692 (746)
T ss_pred hc-CCCccEEEEEccCCccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHH
Confidence 99 99999999999753 577777665310 000 01234444333322
Q ss_pred -----cCeeecEEEEEcC----CCcccCCCchhhHHHHHHHHHc--CCCCcchhh
Q psy14342 270 -----HHLIVGVAVVVDP----GVVPINSRGEKQRMHLRDGFLA--DQLDPIYVA 313 (316)
Q Consensus 270 -----~~~~~~~~~~~~~----~~lP~t~~gKi~r~~l~~~~~~--~~~~~~~~~ 313 (316)
+... ..+.++.. +. -+|++.|++|+.+.+.|+. +.++.+|+.
T Consensus 693 ~~l~~~e~i-~~~~l~~~~~t~~~-~lTpt~KlkR~~v~~~y~~~i~~i~~~y~~ 745 (746)
T PTZ00342 693 TNLNRYNII-NDIYLTSKVWDTNN-YLTPTFKVKRFYVFKDYAFFIDQVKKIYKN 745 (746)
T ss_pred hCCccceee-eeEEEecCCCCCCC-ccChhhhhhHHHHHHHHHHHHHHHHHHhcC
Confidence 1222 33444431 22 3899999999999999884 256667754
No 67
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-36 Score=284.04 Aligned_cols=297 Identities=16% Similarity=0.126 Sum_probs=219.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.++|.++...+......+++.++|+++.++|++|..|+. ++.+++.|+++++.++.
T Consensus 169 ~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G~~~~~~~~~---- 242 (524)
T PRK06188 169 DIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF--FLPTLLRGGTVIVLAKF---- 242 (524)
T ss_pred CeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH--HHHHHHcCCEEEEcCCC----
Confidence 478999999999999999999999999888888889999999999999999988864 57889999999998643
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccccccc-----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLAC-----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls~-----------------e~~~~yG~te~~~~~ 140 (316)
+|..+++.++++++++++.+|+.+..+......... ..+.+-.++ .+.+.||+||++...
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 322 (524)
T PRK06188 243 DPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVI 322 (524)
T ss_pred CHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCce
Confidence 588999999999999999999988665443221100 011111111 277899999986443
Q ss_pred CCCCc-eEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC----------CCcee
Q psy14342 141 CGLGF-ALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS----------CNGAL 194 (316)
Q Consensus 141 ~~~~~-~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~----------~d~g~ 194 (316)
..... ..........++.|.++||++ .+.|++ |+++|+ .||++++..+. +|.|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~ 402 (524)
T PRK06188 323 TYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAR 402 (524)
T ss_pred eecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEE
Confidence 32221 000000111224456899999 877754 999999 89999865542 25666
Q ss_pred eec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHHHH
Q psy14342 195 YQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLVTN 264 (316)
Q Consensus 195 ~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~~ 264 (316)
+++ |. .||.||+|+++|++|+|.+||++|.+ ||.|.+++|++.. +.+++++.+.+.. ...+++.+.+++
T Consensus 403 ~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~ 481 (524)
T PRK06188 403 EDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAE-HPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQAHVKE 481 (524)
T ss_pred EcCCccEEEEeccccceecCCEEECHHHHHHHHHh-CCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHHHH
Confidence 654 33 89999999999999999999999999 9999999999873 3566666665432 233466666666
Q ss_pred HHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCC
Q psy14342 265 AVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 308 (316)
Q Consensus 265 ~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~ 308 (316)
.+. .+..| ..+++++ ++|+|++||++|++|++.|.+|++.
T Consensus 482 ~l~-~~~~p-~~i~~v~--~~P~t~~gKi~r~~L~~~~~~~~~~ 521 (524)
T PRK06188 482 RKG-SVHAP-KQVDFVD--SLPLTALGKPDKKALRARYWEGRGR 521 (524)
T ss_pred hcc-cCCCC-cEEEEec--CCCCCccccccHHHHHHHHHhhccc
Confidence 665 34444 4566665 8999999999999999999887653
No 68
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-35 Score=283.03 Aligned_cols=290 Identities=17% Similarity=0.128 Sum_probs=216.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.++|+++...+..+...+++.++|+++.++|++|.+|+.. ++.++..|+++++.++.
T Consensus 182 ~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~---- 256 (540)
T PRK06164 182 AGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFST-LLGALAGGAPLVCEPVF---- 256 (540)
T ss_pred ceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHH-HHHHHhcCceEEecCCC----
Confidence 4789999999999999999999999999888889999999999999999999999975 89999999999887532
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHh---hhhhcccccc-----------------cccccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA---VTSLCRSMKL-----------------ACELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~---~~~~~~~~~l-----------------s~e~~~~yG~te~~~~~ 140 (316)
++..+++.++++++|+++.+|+++..+...... +... +.+.. ..++++.||+||++...
T Consensus 257 ~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 335 (540)
T PRK06164 257 DAARTARALRRHRVTHTFGNDEMLRRILDTAGERADFPSA-RLFGFASFAPALGELAALARARGVPLTGLYGSSEVQALV 335 (540)
T ss_pred CHHHHHHHHHHhCCeeecCCHHHHHHHHHhhcccCCCcce-eeeeeccCCcchHHHHHHHhhcCCceecceeecccccee
Confidence 578899999999999999999888655443111 0000 00000 01388899999987543
Q ss_pred CCCCceE-EEEeeeccCccccc-CCCce-EEecCc------------eEEecC---CCcccCCCcCCC-----------C
Q psy14342 141 CGLGFAL-WVLSSVYSGHHSIL-IPPSE-VEVNPA------------LWLSAV---SQYRVRDTFCSC-----------N 191 (316)
Q Consensus 141 ~~~~~~~-~~~~~~~~g~~~~~-~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~~~-----------d 191 (316)
....... ...... ..+.+ .+++. +++|++ |+++|+ .|||++++.+.. |
T Consensus 336 ~~~~~~~~~~~~~~---~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGD 412 (540)
T PRK06164 336 ALQPATDPVSVRIE---GGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGD 412 (540)
T ss_pred eccCCCCCCcceec---cCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCC
Confidence 2221100 000111 11223 36777 777742 999999 899999876532 5
Q ss_pred ceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC----CcEEEEEEecCCc-hhhcchHHHH
Q psy14342 192 GALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT----NLLVVVVELDGNE-SEALDLVPLV 262 (316)
Q Consensus 192 ~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~----~~~~~~v~~~~~~-~~~~~l~~~~ 262 (316)
.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.++++++..+.. .+.+++.+.+
T Consensus 413 l~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~ 491 (540)
T PRK06164 413 LGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEA-LPGVAAAQVVGATRDGKTVPVAFVIPTDGASPDEAGLMAAC 491 (540)
T ss_pred eEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHh-CCCceeEEEEecCCCCceeEEEEEEeCCCCCCCHHHHHHHH
Confidence 555543 32 89999999999999999999999999 9999999999862 3566666665432 3446788888
Q ss_pred HHHHHHhcCeeecEEEEEcCCCcccCCCc---hhhHHHHHHHHHc
Q psy14342 263 TNAVLEEHHLIVGVAVVVDPGVVPINSRG---EKQRMHLRDGFLA 304 (316)
Q Consensus 263 ~~~l~~~~~~~~~~~~~~~~~~lP~t~~g---Ki~r~~l~~~~~~ 304 (316)
++.+. .+..| ..+.+++ .+|+|++| |++|+.|++.++.
T Consensus 492 ~~~l~-~~~~P-~~i~~~~--~~P~t~~g~~~Ki~r~~L~~~~~~ 532 (540)
T PRK06164 492 REALA-GFKVP-ARVQVVE--AFPVTESANGAKIQKHRLREMAQA 532 (540)
T ss_pred Hhhcc-cCcCC-cEEEEec--CCCCCCCCccccccHHHHHHHHHH
Confidence 87776 55555 4566655 89999999 9999999988664
No 69
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-36 Score=285.26 Aligned_cols=286 Identities=15% Similarity=0.099 Sum_probs=211.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||||+++|+++..........+.+..+|+++..+|++|.+|+.. ++.++..|+++++... .
T Consensus 197 ~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~g~~~~~~~~----~ 271 (537)
T PRK13382 197 KGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQ-LVLAASLACTIVTRRR----F 271 (537)
T ss_pred CCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHH-HHHHHhcCcEEEECCC----c
Confidence 4689999999999999999999988888777777788888999999999999999865 8889999999888643 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHh-hhh----hcccccccc-----------------cccccccchhccC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA-VTS----LCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~-~~~----~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
+|..+++.+++++++++..+|+++..+...... ... ..+.+..++ .+++.||+||++.
T Consensus 272 ~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~ 351 (537)
T PRK13382 272 DPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGM 351 (537)
T ss_pred CHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCc
Confidence 688999999999999999999988765443211 000 011122222 2788999999875
Q ss_pred CCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCc-------CCCCceeee
Q psy14342 139 PYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTF-------CSCNGALYQ 196 (316)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~-------~~~d~g~~~ 196 (316)
........ .....++.|.+++|++ +++|++ |+++|+ .||+..... .++|.++++
T Consensus 352 ~~~~~~~~----~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~ 427 (537)
T PRK13382 352 IATATPAD----LRAAPDTAGRPAEGTEIRILDQDFREVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLD 427 (537)
T ss_pred ceecChhH----hccCCCCccccCcCcEEEEECCCCCCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEe
Confidence 33322111 0112345556899999 888764 999999 899832111 123666665
Q ss_pred c-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHHHHHH
Q psy14342 197 G-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLVTNAV 266 (316)
Q Consensus 197 ~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~~~l 266 (316)
+ |. .||.||+||++|++|+|.|||+.|.+ ||+|.+++|++.. +.+++++++.+.. .+.+++.++++..+
T Consensus 428 ~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~-~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l~~~l 506 (537)
T PRK13382 428 ENGRLFVVGRDDEMIVSGGENVYPIEVEKTLAT-HPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQHVRDNL 506 (537)
T ss_pred CCCcEEEeccccceeEECCEEECHHHHHHHHHh-CCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHHHHHhc
Confidence 4 33 99999999999999999999999999 9999999999883 3567767665432 23356667777666
Q ss_pred HHhcCeeecEEEEEcCCCcccCCCchhhHHHHHH
Q psy14342 267 LEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 300 (316)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~ 300 (316)
. .+..| ..+.++. ++|+|++||++|++|++
T Consensus 507 ~-~~~~P-~~i~~v~--~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 507 A-NYKVP-RDIVVLD--ELPRGATGKILRRELQA 536 (537)
T ss_pred c-CCCCC-cEEEEec--cCCCCCCCCCcHHhhCC
Confidence 6 44454 4556654 89999999999999864
No 70
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=8.6e-36 Score=281.08 Aligned_cols=288 Identities=14% Similarity=0.114 Sum_probs=214.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|.++|+++...+......++++++|+++.++|++|..|+...++.++..|+++++.+..
T Consensus 157 ~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~---- 232 (504)
T PRK07514 157 DLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKF---- 232 (504)
T ss_pred CeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCC----
Confidence 5799999999999999999999999999888888899999999999999999999988788999999999987542
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~~~ 140 (316)
++..+++.+ .++++++.+|.++..+........ ...+.+-.++ .+++.||+||++...
T Consensus 233 ~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 310 (504)
T PRK07514 233 DPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNT 310 (504)
T ss_pred CHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccc
Confidence 578888888 368888888888765443221100 0011111111 278899999986432
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcCC-----------CCce
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFCS-----------CNGA 193 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~~-----------~d~g 193 (316)
..... .....++.+.+++|++ +++|++ |+++|+ .|||++++.+. +|.|
T Consensus 311 ~~~~~-----~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~ 385 (504)
T PRK07514 311 SNPYD-----GERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLG 385 (504)
T ss_pred cCCcc-----ccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceE
Confidence 21110 1111234445899999 888832 999999 89999876543 2555
Q ss_pred eeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch-hhcchHHHHH
Q psy14342 194 LYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES-EALDLVPLVT 263 (316)
Q Consensus 194 ~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~ 263 (316)
++++ |. .||.||+||++|++|+|.|||++|.+ +++|.+++|++.. +.++++++..+... +.+++.+.++
T Consensus 386 ~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 464 (504)
T PRK07514 386 KIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDE-LPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALK 464 (504)
T ss_pred EEcCCccEEEeccccceEEeCCeEECHHHHHHHHHh-CCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHH
Confidence 5544 32 89999999999999999999999999 9999999999873 34666666554332 4456777777
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+.+. .+..| ..+++++ ++|+|++||++|++|++.|.+
T Consensus 465 ~~l~-~~~~p-~~i~~v~--~~p~t~~gK~~r~~l~~~~~~ 501 (504)
T PRK07514 465 GRLA-RFKQP-KRVFFVD--ELPRNTMGKVQKNLLREQYAD 501 (504)
T ss_pred hhcc-cCCCC-cEEEEec--cCCCCCCcceeHHHHHHHHHh
Confidence 7766 44444 3555555 899999999999999988765
No 71
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-35 Score=283.23 Aligned_cols=294 Identities=17% Similarity=0.124 Sum_probs=218.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.++|+++..++......+++.++|+++..+|++|.+|++..++.++..|+++++.... .
T Consensus 202 ~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~---~ 278 (558)
T PRK12583 202 DPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEA---F 278 (558)
T ss_pred CcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCC---C
Confidence 4689999999999999999999999988888888889999999999999999999998889999999988875432 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
++..+++.++++++++++.+|+++..+........ ...+.+-.++ .+.+.||.||++..
T Consensus 279 ~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~ 358 (558)
T PRK12583 279 DPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPV 358 (558)
T ss_pred CHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccc
Confidence 68889999999999999999988754443221100 0011111111 27778999999754
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC-----------CCCce
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC-----------SCNGA 193 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~-----------~~d~g 193 (316)
........ ......++.|.+++|+. .++|++ |+++|+ .||++++..+ ++|.|
T Consensus 359 ~~~~~~~~--~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~ 436 (558)
T PRK12583 359 SLQTTAAD--DLERRVETVGRTQPHLEVKVVDPDGATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLA 436 (558)
T ss_pred eeccCccc--ccccccCCCCccCCCCeEEEECCCCCCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceE
Confidence 33221100 00011233445789998 887764 899998 8999886543 22556
Q ss_pred eeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHHH
Q psy14342 194 LYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLVT 263 (316)
Q Consensus 194 ~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~ 263 (316)
++++ |. .||.||+|+++|++|+|.|||+.|.+ ||.|.+++|++.. +.++++++..+.. .+..++.+.++
T Consensus 437 ~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~ 515 (558)
T PRK12583 437 TMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFT-HPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAASEEELREFCK 515 (558)
T ss_pred EECCCccEEEEecccceeEECCEEeCHHHHHHHHHh-CCCeeEEEEEeeecCCCCcEEEEEEEECCCCCCCHHHHHHHHH
Confidence 5543 33 89999999999999999999999999 9999999999873 4567777665432 23356777777
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+.+. .+..| ..+.+++ ++|+|++||++|++|++...+
T Consensus 516 ~~L~-~~~~P-~~i~~v~--~lP~t~sGK~~r~~L~~~~~~ 552 (558)
T PRK12583 516 ARIA-HFKVP-RYFRFVD--EFPMTVTGKVQKFRMREISIE 552 (558)
T ss_pred hhcc-cCcCC-cEEEEec--cCCCCCCCCccHHHHHHHHHh
Confidence 7766 44454 4555554 899999999999999998765
No 72
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=5.3e-36 Score=311.00 Aligned_cols=294 Identities=14% Similarity=0.088 Sum_probs=216.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|++||+|||||||.||||+++|+++...+......+++.++|+++.+.|++|+.+++. ++.++..|+++++.++.. ..
T Consensus 599 ~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~l~~G~~l~~~~~~~-~~ 676 (1296)
T PRK10252 599 HTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWE-FFWPFIAGAKLVMAEPEA-HR 676 (1296)
T ss_pred CeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHH-HHHHHhCCCEEEECChhc-cC
Confidence 5799999999999999999999999999999999999999999999999999998876 899999999999976543 45
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhcccccccc-----------------cccccccchhccC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
+|..+++.++++++|++..+|+.+..+........ ...+.+-.++ .+++.||+||++.
T Consensus 677 ~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~ 756 (1296)
T PRK10252 677 DPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAV 756 (1296)
T ss_pred CHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhh
Confidence 78999999999999999999998865543321100 0011111222 2888999999864
Q ss_pred CCCCCCceEEEE--eeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC-----------
Q psy14342 139 PYCGLGFALWVL--SSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC----------- 190 (316)
Q Consensus 139 ~~~~~~~~~~~~--~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~----------- 190 (316)
............ ......+.|.+++|.+ .++|++ |+++|+ .||+++++.+..
T Consensus 757 ~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~ 836 (1296)
T PRK10252 757 DVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGE 836 (1296)
T ss_pred eeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCC
Confidence 322111100000 0011124556899999 888754 999999 899998876532
Q ss_pred ------Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee---------CC--cEEEEEEec
Q psy14342 191 ------NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW---------TN--LLVVVVELD 249 (316)
Q Consensus 191 ------d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~---------~~--~~~~~v~~~ 249 (316)
|.|++++ |. +||.||+||++|+||+|.|||++|.+ ||.|.+++|+.. ++ .++++++..
T Consensus 837 ~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~-~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~ 915 (1296)
T PRK10252 837 RMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQA-LPDVEQAVTHACVINQAAATGGDARQLVGYLVSQ 915 (1296)
T ss_pred EEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHh-CccccceEEEEEeccccccCCCCccEEEEEEEcC
Confidence 5555543 33 99999999999999999999999999 999999987754 12 477777655
Q ss_pred CCc-hhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHH
Q psy14342 250 GNE-SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 301 (316)
Q Consensus 250 ~~~-~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~ 301 (316)
... .+.+++.+.+++.+. .+..| ..+.. ++.+|+|++||++|++|.+.
T Consensus 916 ~~~~~~~~~l~~~l~~~Lp-~~~~P-~~~~~--~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 916 SGLPLDTSALQAQLRERLP-PHMVP-VVLLQ--LDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred CCCCCCHHHHHHHHHhhCc-hhcCC-cEEEE--ecCCCCCCCcChhHHhcCCC
Confidence 432 233567777776666 33333 33444 45899999999999999753
No 73
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-35 Score=280.89 Aligned_cols=302 Identities=18% Similarity=0.199 Sum_probs=214.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCC-CceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPS-RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~-d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||+|+++|+++...+......+++.++ |+++.++|++|.+|++..++.++..|+++++..+..+.
T Consensus 153 ~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~ 232 (545)
T PRK07768 153 DLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFL 232 (545)
T ss_pred CEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHH
Confidence 58999999999999999999999999888888888888876 89999999999999988778899999999998876666
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhh------h-hhcccccccc-----------------------cccc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV------T-SLCRSMKLAC-----------------------ELYP 129 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~------~-~~~~~~~ls~-----------------------e~~~ 129 (316)
.+|..|++++++++++++..++..+..+....... . ...+.+-..+ .+++
T Consensus 233 ~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 312 (545)
T PRK07768 233 RDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILP 312 (545)
T ss_pred HhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccc
Confidence 68889999999999997654444432222211000 0 0000000000 2678
Q ss_pred cccchhccCCCCCCCc--e--EEE-------------E----eeeccCcccccCCCce-EEecCc-----------eEEe
Q psy14342 130 SRHIALCLDPYCGLGF--A--LWV-------------L----SSVYSGHHSILIPPSE-VEVNPA-----------LWLS 176 (316)
Q Consensus 130 ~yG~te~~~~~~~~~~--~--~~~-------------~----~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~ 176 (316)
.||+||++........ . ... . .....+..|.+++|.+ +++|++ |+++
T Consensus 313 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~ 392 (545)
T PRK07768 313 AYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVDEDGQVLPPRGVGVIELR 392 (545)
T ss_pred cccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEECCCCCCCCCCCEEEEEEc
Confidence 8999998643211100 0 000 0 0001123345789999 887743 8999
Q ss_pred cC---CCcccCCCcC----------CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC
Q psy14342 177 AV---SQYRVRDTFC----------SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT 239 (316)
Q Consensus 177 ~~---~gY~~~~~~~----------~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~ 239 (316)
|+ .|||+++... ++|.|++++ |. +||.||+||++|++|+|.|||++|.+ ||.|.+++|++..
T Consensus 393 ~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~-~~~v~~~~vv~~~ 471 (545)
T PRK07768 393 GESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAAR-VEGVRPGNAVAVR 471 (545)
T ss_pred cCcccccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHh-CcccccceEEEEE
Confidence 98 8999864322 225555554 43 99999999999999999999999999 9999997777652
Q ss_pred -------CcEEEEEEecCCch--hhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 240 -------NLLVVVVELDGNES--EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 240 -------~~~~~~v~~~~~~~--~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
+.++++++...... ...++.+.+++.+...++..+..+.+++.+.||+|++||++|+.|++.|.
T Consensus 472 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 472 LDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred ecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 24555554443221 11356677777777666555567888887799999999999999998875
No 74
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-35 Score=281.94 Aligned_cols=299 Identities=16% Similarity=0.108 Sum_probs=211.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHH-HHh-cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK-LAC-ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~-~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
++++|+|||||||.||+|.++|+++...+.... ..+ +..++|+++.++|++|++++.. ++ .++.|+++++.+...+
T Consensus 164 ~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~-~~~~g~~~~~~~~~~~ 241 (528)
T PRK07470 164 DPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQ-LC-QVARGAATVLLPSERF 241 (528)
T ss_pred CeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHH-HH-HHhcCceEEEecccCc
Confidence 589999999999999999999999875543322 222 4677899999999999998865 44 5777888877654332
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccC
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
++..+++.+++++++++..+|+++..+........ ...+.+-.++ .+.+.||+||++.
T Consensus 242 --~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~ 319 (528)
T PRK07470 242 --DPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTG 319 (528)
T ss_pred --CHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCC
Confidence 68889999999999999999998876544322100 0011111111 2778999999865
Q ss_pred CCCCCCceEEE---EeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC----------C
Q psy14342 139 PYCGLGFALWV---LSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS----------C 190 (316)
Q Consensus 139 ~~~~~~~~~~~---~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~----------~ 190 (316)
......+.... ......++.|.+++|.+ ++.|++ |+++|+ .|||++++.+. +
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TG 399 (528)
T PRK07470 320 NITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTG 399 (528)
T ss_pred ceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecc
Confidence 33222110000 00111233345789988 777753 899999 89999866543 2
Q ss_pred Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHH
Q psy14342 191 NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVP 260 (316)
Q Consensus 191 d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~ 260 (316)
|.|++++ |. .||.||+||++|++|+|.|||++|.+ +|.|.+|+|++.. +..++++...+.. .+.+++.+
T Consensus 400 Dl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (528)
T PRK07470 400 DLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLT-HPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPVDEAELLA 478 (528)
T ss_pred eeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHh-CCCceEEEEEeccCcccCceeEEEEEECCCCCCCHHHHHH
Confidence 5566643 43 99999999999999999999999999 9999999999983 3455555554432 34467888
Q ss_pred HHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCC
Q psy14342 261 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLD 308 (316)
Q Consensus 261 ~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~ 308 (316)
.+++.+. .+..| ..+.+++ ++|+|++||++|+.|++.+.+..+.
T Consensus 479 ~l~~~l~-~~~~P-~~~~~~~--~iP~t~~GKi~r~~l~~~~~~~~~~ 522 (528)
T PRK07470 479 WLDGKVA-RYKLP-KRFFFWD--ALPKSGYGKITKKMVREELEERGLL 522 (528)
T ss_pred HHHHhhh-cCCCC-cEEEEec--cCCCCCcccccHHHHHHHHHhcccc
Confidence 8888876 56665 3455554 8999999999999999998875443
No 75
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=6.2e-36 Score=283.01 Aligned_cols=286 Identities=13% Similarity=0.099 Sum_probs=210.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.+||+++............+.++|+++.++|++|..++...++.++..|+++++.+..
T Consensus 174 ~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~---- 249 (517)
T PRK08008 174 DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKY---- 249 (517)
T ss_pred CeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEcccc----
Confidence 5799999999999999999999999866544444456788999999999999888877788999999999997643
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhccccc----cc------------ccccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMK----LA------------CELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~----ls------------~e~~~~yG~te~~~~~~ 141 (316)
++..+++.+++++++++..+|+++..+........ ...+.+. ++ ..+++.||+||++....
T Consensus 250 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 329 (517)
T PRK08008 250 SARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYLNLSDQEKDAFEERFGVRLLTSYGMTETIVGII 329 (517)
T ss_pred CHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEecCCCHHHHHHHHHHhCCeEEeeccccccccccc
Confidence 57889999999999999989988765543221100 0001110 01 03888999999975443
Q ss_pred CCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEec---C---CCcccCCCcCCC-----------Cc
Q psy14342 142 GLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSA---V---SQYRVRDTFCSC-----------NG 192 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~---~---~gY~~~~~~~~~-----------d~ 192 (316)
...+. .....++.|.+++|++ +++|++ |+++| + .|||++++.+.. |.
T Consensus 330 ~~~~~----~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl 405 (517)
T PRK08008 330 GDRPG----DKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDT 405 (517)
T ss_pred cCCcc----ccccCCccccCCCCcEEEEECCCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccce
Confidence 22221 1111223445789999 888754 89997 3 899998876542 55
Q ss_pred eeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch-hhcchHHHH
Q psy14342 193 ALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES-EALDLVPLV 262 (316)
Q Consensus 193 g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~ 262 (316)
|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.+.+++++..... +.+++.+++
T Consensus 406 ~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~-~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 484 (517)
T PRK08008 406 GYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAT-HPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFAFC 484 (517)
T ss_pred EEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHh-CCceeeEEEEccCCCCCCceEEEEEEECCCCCCCHHHHHHHH
Confidence 55543 33 99999999999999999999999999 9999999999984 35667776665432 235677777
Q ss_pred HHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHH
Q psy14342 263 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 299 (316)
Q Consensus 263 ~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~ 299 (316)
++++. .+..| ..+.+++ ++|+|++||++|+.|+
T Consensus 485 ~~~l~-~~~~P-~~~~~v~--~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 485 EQNMA-KFKVP-SYLEIRK--DLPRNCSGKIIKKNLK 517 (517)
T ss_pred Hhhcc-cccCC-cEEEEec--cCCCCCccceehhhcC
Confidence 77766 45554 3555554 8999999999999864
No 76
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-35 Score=273.07 Aligned_cols=276 Identities=13% Similarity=0.079 Sum_probs=207.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++|+|||||||.||+|.+||+++..++..+...+++..+|+.+.++|++|.+|++..++.++..|+++++.+..
T Consensus 102 ~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~---- 177 (414)
T PRK08308 102 EPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNK---- 177 (414)
T ss_pred CceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCC----
Confidence 5799999999999999999999999998888888888889999999999999999988889999999999987542
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc----------------cccccccchhccCCCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC----------------ELYPSRHIALCLDPYCGLG 144 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~----------------e~~~~yG~te~~~~~~~~~ 144 (316)
+|..+++.++++++++++.+|..+..+........ ..+.+-.++ .+++.||+||++.......
T Consensus 178 ~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~-~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 256 (414)
T PRK08308 178 NPKFALNILRNTPQHILYAVPLMLHILGRLLPGTF-QFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD 256 (414)
T ss_pred CHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCccc-cccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC
Confidence 68899999999999998888888765543221100 011111111 2888999999864221111
Q ss_pred ceEEEEeeeccCcccccCCCce-EEecC-----ceEEecCCCcccCCCcCCCCceeeec-Cc---CCcccceeEECCccc
Q psy14342 145 FALWVLSSVYSGHHSILIPPSE-VEVNP-----ALWLSAVSQYRVRDTFCSCNGALYQG-AE---RLALDETIMLRGMRY 214 (316)
Q Consensus 145 ~~~~~~~~~~~g~~~~~~~g~~-~i~d~-----~l~v~~~~gY~~~~~~~~~d~g~~~~-g~---~GR~dd~i~~~G~~v 214 (316)
....++.|.|+|+++ .+.++ +|++++..+++. ++|.|++++ |. +||.||+||++|++|
T Consensus 257 -------~~~~~~~G~p~~~~~~~~~~~~~~~gel~v~~~~~~~~-----TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v 324 (414)
T PRK08308 257 -------MKSHLDLGNPLPHVSVSAGSDENAPEEIVVKMGDKEIF-----TKDLGYKSERGTLHFMGRMDDVINVSGLNV 324 (414)
T ss_pred -------CCCCCccCccCCCeEEEEecCCCCCceEEEEcCCceEE-----CCceEEECCCccEEEecccCCeEEECCEEE
Confidence 111234455899999 66532 288877644332 458888764 43 999999999999999
Q ss_pred ChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCC
Q psy14342 215 HPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINS 289 (316)
Q Consensus 215 ~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~ 289 (316)
+|.|||++|.+ +|.|.+|+|++.. +.+++++.... ..+.+++.+++++++. .+..| ..+.+++ ++|+|+
T Consensus 325 ~p~eIE~~l~~-~~~v~~a~v~~~~~~~~~~~~~~~v~~~~-~~~~~~l~~~l~~~l~-~~~~P-~~i~~v~--~iP~t~ 398 (414)
T PRK08308 325 YPIEVEDVMLR-LPGVQEAVVYRGKDPVAGERVKAKVISHE-EIDPVQLREWCIQHLA-PYQVP-HEIESVT--EIPKNA 398 (414)
T ss_pred CHHHHHHHHHh-CCCeeEEEEEeccCCCCCceEEEEEEeCC-CCCHHHHHHHHHHhCc-cccCC-cEEEEec--cCCCCC
Confidence 99999999999 9999999999873 35556655443 3344677888888777 45554 4566665 899999
Q ss_pred CchhhHHHHH
Q psy14342 290 RGEKQRMHLR 299 (316)
Q Consensus 290 ~gKi~r~~l~ 299 (316)
+||++|++|.
T Consensus 399 ~GKi~r~~~~ 408 (414)
T PRK08308 399 NGKVSRKLLE 408 (414)
T ss_pred CcCeehhhhh
Confidence 9999999543
No 77
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.9e-36 Score=281.80 Aligned_cols=289 Identities=15% Similarity=0.104 Sum_probs=216.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.++|.++...+......+++.++|+++.++|++|.+++...++.++..|+++++... .
T Consensus 167 ~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~----~ 242 (513)
T PRK07656 167 DVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLPV----F 242 (513)
T ss_pred ceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecCc----C
Confidence 579999999999999999999999998888888889999999999999999999998878999999999988643 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
++..+++.++++++++++.+|.++..+........ ...+.+-..+ .+++.||+||++..
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 322 (513)
T PRK07656 243 DPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGV 322 (513)
T ss_pred CHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCc
Confidence 68899999999999999999988876554322110 0011111111 27889999999654
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC-----------CCCce
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC-----------SCNGA 193 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~-----------~~d~g 193 (316)
......... .....++.|.+++|.+ .++|++ |+++|+ .|||+++..+ ++|.|
T Consensus 323 ~~~~~~~~~--~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~ 400 (513)
T PRK07656 323 TTFNRLDDD--RKTVAGTIGTAIAGVENKIVNELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLG 400 (513)
T ss_pred eeecCcccc--ccccCCCccccCCCcEEEEECCCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceE
Confidence 432221100 0011234556899999 887642 999999 8999876443 33666
Q ss_pred eeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecC-CchhhcchHHHHH
Q psy14342 194 LYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDG-NESEALDLVPLVT 263 (316)
Q Consensus 194 ~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~-~~~~~~~l~~~~~ 263 (316)
++++ |. .||.||+|+++|.+|+|.|||++|.+ +++|.+++|++.. +.+.++++..+ ...+..++.+.++
T Consensus 401 ~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~ 479 (513)
T PRK07656 401 RLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYE-HPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTEEELIAYCR 479 (513)
T ss_pred EEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHh-CCCeeEEEEEecCCcccCceEEEEEEECCCCCCCHHHHHHHHH
Confidence 6643 33 99999999999999999999999999 9999999999873 34566666554 2233456777777
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHH
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 300 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~ 300 (316)
+.+. .+..| ..+.++. ++|+|++||++|++|++
T Consensus 480 ~~l~-~~~~p-~~i~~v~--~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 480 EHLA-KYKVP-RSIEFLD--ELPKNATGKVLKRALRE 512 (513)
T ss_pred hhcc-cccCC-CEEEEec--CCCCCCccceeHHHHhc
Confidence 7766 44444 3566665 89999999999999875
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=9.8e-36 Score=305.47 Aligned_cols=290 Identities=11% Similarity=0.068 Sum_probs=212.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||||.+||+++..+.......+++.++|+++.++|++|.+|+...++.++..|+++++.+.. .
T Consensus 794 d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~---~ 870 (1140)
T PRK06814 794 DPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSP---L 870 (1140)
T ss_pred CcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCc---c
Confidence 6799999999999999999999999998888888899999999999999999999977788999999999887532 1
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-hhcccccccc-----------------cccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-SLCRSMKLAC-----------------ELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-~~~~~~~ls~-----------------e~~~~yG~te~~~~~~~ 142 (316)
++..+.+.++++++|++..+|+++..+.......+ ...+.+-..+ ++++.||+||++.....
T Consensus 871 ~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~ 950 (1140)
T PRK06814 871 HYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIAL 950 (1140)
T ss_pred cHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEe
Confidence 45567889999999999999988766544321111 0011111111 27889999998754322
Q ss_pred CCceEEEEeeeccCcccccCCCce-EEecC-------ceEEecC---CCcccCCCcC-----------CCCceeeec-Cc
Q psy14342 143 LGFALWVLSSVYSGHHSILIPPSE-VEVNP-------ALWLSAV---SQYRVRDTFC-----------SCNGALYQG-AE 199 (316)
Q Consensus 143 ~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~-------~l~v~~~---~gY~~~~~~~-----------~~d~g~~~~-g~ 199 (316)
..+ .....++.|.++||++ ++.+. +|+++|+ .|||++++.. ++|.|++++ |.
T Consensus 951 ~~~-----~~~~~~~vG~p~~g~~~~~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~ 1025 (1140)
T PRK06814 951 NTP-----MHNKAGTVGRLLPGIEYRLEPVPGIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGF 1025 (1140)
T ss_pred cCC-----CCCCCCcCCccCCCCeEEEeecCCCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCe
Confidence 211 0112234556899998 66542 2999999 8999875432 225555544 32
Q ss_pred ---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHHHHHHHhcC
Q psy14342 200 ---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHH 271 (316)
Q Consensus 200 ---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~ 271 (316)
.||.||+||++|++|+|.|||++|.+ |+.+.+++|+++. +++++++. ....+.+++.+.+++.....+.
T Consensus 1026 l~~~GR~~d~i~~~G~~v~~~eIE~~l~~-~~~v~~~~vv~~~~~~~g~~~~~~~~--~~~~~~~~l~~~~~~~~l~~~~ 1102 (1140)
T PRK06814 1026 ITIKGRAKRFAKIAGEMISLAAVEELAAE-LWPDALHAAVSIPDARKGERIILLTT--ASDATRAAFLAHAKAAGASELM 1102 (1140)
T ss_pred EEEEecccCeeeeCCEEECHHHHHHHHHh-cCCcccEEEEEcccCCCCceEEEEEc--CCCcCHHHHHHHHHHcCCCccc
Confidence 99999999999999999999999999 9999999999873 34444432 2223345666666654222454
Q ss_pred eeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 272 LIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 272 ~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.| ..+.+++ ++|+|++||++|++|++...+
T Consensus 1103 ~P-~~i~~v~--~lP~t~~GKi~r~~L~~~~~~ 1132 (1140)
T PRK06814 1103 VP-AEIITID--EIPLLGTGKIDYVAVTKLAEE 1132 (1140)
T ss_pred CC-cEEEEec--CcCCCCCCCCcHHHHHHHHHH
Confidence 54 4555555 899999999999999988765
No 79
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=2.2e-35 Score=278.08 Aligned_cols=297 Identities=13% Similarity=0.126 Sum_probs=210.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.++|+++...+......+++..+|+++.++|++|..++.. ++.++..|+++++.+.. ...
T Consensus 144 ~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~g~~~v~~~~~-~~~ 221 (503)
T PRK04813 144 DNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMD-LYPTLASGGTLVALPKD-MTA 221 (503)
T ss_pred CcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHH-HHHHHhcCCEEEEcChh-hhc
Confidence 4789999999999999999999999988887778888889999999999999988866 78999999999987653 345
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
++..+++.++++++++++.+|+++..+........ ...+.+-.++ .+++.||+||++..
T Consensus 222 ~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 301 (503)
T PRK04813 222 NFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVA 301 (503)
T ss_pred CHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeE
Confidence 78899999999999999989988754433221100 0011111111 27889999998643
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC--------------C
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS--------------C 190 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~--------------~ 190 (316)
.................+.+.+++|.+ ++.|++ |+++|+ .|||++++.+. +
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tG 381 (503)
T PRK04813 302 VTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTG 381 (503)
T ss_pred EEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECC
Confidence 211000000000011123445788888 776543 899998 89999876442 2
Q ss_pred CceeeecCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchh-hcchHHH
Q psy14342 191 NGALYQGAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESE-ALDLVPL 261 (316)
Q Consensus 191 d~g~~~~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~-~~~l~~~ 261 (316)
|.|++.+|. .||.||+|+++|++|+|.|||++|.+ ||+|.+++|++.. +.+++++...+...+ ..++.+.
T Consensus 382 D~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 460 (503)
T PRK04813 382 DAGYLEDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQ-SSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKA 460 (503)
T ss_pred ceEEeeCCeEEEeccccceEEECcEEeCHHHHHHHHHh-CCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHH
Confidence 555553343 89999999999999999999999999 9999999999863 356666665543222 2234444
Q ss_pred HHHHHHHh---cCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 262 VTNAVLEE---HHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 262 ~~~~l~~~---~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
+++.+.+. +..| ..+.++ +.+|+|++||++|++|++.+.
T Consensus 461 l~~~~~~~l~~~~~P-~~i~~~--~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 461 IKKELKERLMEYMIP-RKFIYR--DSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred HHHHHHhhCccccCC-eEEEEe--ccCCCCCCCCCcHHHHHHHhc
Confidence 55554433 3333 344444 489999999999999998875
No 80
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.2e-37 Score=262.56 Aligned_cols=285 Identities=17% Similarity=0.170 Sum_probs=227.0
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHH-HHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALW-VLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~-~~~~l~~G~~~v~~~~~~~~ 79 (316)
++|+.+.+.||||.||.+..||.....++.+-...++++..++.++.+|..|.+-+... +++.++.|+++|+.+..
T Consensus 190 ~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~p--- 266 (542)
T COG1021 190 EVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDP--- 266 (542)
T ss_pred ceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECCCC---
Confidence 47999999999999999999999888888888888999999999999999999887543 78999999999997533
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc-------------------------cccccccch
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC-------------------------ELYPSRHIA 134 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~-------------------------e~~~~yG~t 134 (316)
+|...+.+++++++|++-.+|+....+.+..+. +..++|+ .+.+.|||+
T Consensus 267 -sp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~-----~~~~LsSLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMA 340 (542)
T COG1021 267 -SPELCFPLIERHGVTVTALVPPLASLWLQAAEW-----ERADLSSLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMA 340 (542)
T ss_pred -CHHHHHHHHHHhccceEEeccHHHHHHHHhhhc-----ccCCchheeEEeecCcccCHHHHhhchhhhCchHHHHhhhh
Confidence 688899999999999998888876444444333 2333333 288899999
Q ss_pred hccCCCCCCC--ceEEEEeeeccCcccccC-CCce-EEecCc-----------eEEecC---CCcccCCCcCCC---Cce
Q psy14342 135 LCLDPYCGLG--FALWVLSSVYSGHHSILI-PPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC---NGA 193 (316)
Q Consensus 135 e~~~~~~~~~--~~~~~~~~~~~g~~~~~~-~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~---d~g 193 (316)
|-.-.|+-.. ++. -....| .|+ |.-+ +++|.+ |..||| .|||.-|+.... ..|
T Consensus 341 EGLvnyTRLDDp~E~---i~~TQG---rPlsP~DEvrvvD~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~G 414 (542)
T COG1021 341 EGLVNYTRLDDPPEI---IIHTQG---RPLSPDDEVRVVDADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADG 414 (542)
T ss_pred hhhhcccccCCchHh---eeecCC---CcCCCcceeEEecCCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCC
Confidence 8765554221 111 112233 244 4445 888765 999999 999987655433 345
Q ss_pred eeec---------Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee-----CCcEEEEEEecCCchhhc
Q psy14342 194 LYQG---------AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNESEAL 256 (316)
Q Consensus 194 ~~~~---------g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~-----~~~~~~~v~~~~~~~~~~ 256 (316)
|+.. |. .||.||+||.+|+||..+|||+.|.+ ||.|.+|++|+. ||+.++++.+++......
T Consensus 415 FYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~-HP~V~~AAlVampDelLGEksCAfiv~~~~~~~~~ 493 (542)
T COG1021 415 FYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLR-HPAVHDAALVAMPDELLGEKSCAFIVVKEPPLRAA 493 (542)
T ss_pred ceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhh-CchhhhhhhhcCchhhcCcceeEEEEecCCCCCHH
Confidence 5533 32 99999999999999999999999999 999999999998 578999998888776777
Q ss_pred chHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 257 DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 257 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
++.+.+++.-...+++| .++++++ ++|.|+-|||+|++|++++..
T Consensus 494 qlr~~L~~~GlAa~K~P-Drie~v~--~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 494 QLRRFLRERGLAAFKLP-DRIEFVD--SLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred HHHHHHHHcchhhhcCC-cceeecc--cCCCcccccccHHHHHHHhhh
Confidence 88898988766678886 7899988 999999999999999998875
No 81
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.2e-36 Score=338.99 Aligned_cols=293 Identities=17% Similarity=0.147 Sum_probs=222.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+|||+|||||||.||||+++|+++...+......+++.++|+++...|++|+++++. ++.++..|+++++.++.. ..
T Consensus 656 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~-~~~~L~~G~~l~i~~~~~-~~ 733 (5163)
T PRK12316 656 NLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWE-FFWPLMSGARLVVAAPGD-HR 733 (5163)
T ss_pred CeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHH-HHHHHhCCCEEEECCccc-cC
Confidence 5799999999999999999999999999999999999999999999999999999876 899999999999986543 34
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-hhcccccccc------------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-SLCRSMKLAC------------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-~~~~~~~ls~------------------e~~~~yG~te~~~~~~ 141 (316)
+|..+++.++++++|++..+|+++..+........ ...+.+-+++ .+++.||+||++....
T Consensus 734 ~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 813 (5163)
T PRK12316 734 DPAKLVELINREGVDTLHFVPSMLQAFLQDEDVASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVT 813 (5163)
T ss_pred CHHHHHHHHHHcCCeEEEeCHHHHHHHHhccccccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeee
Confidence 78899999999999999999999876643221100 0111222222 2889999999873221
Q ss_pred CCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC----------------
Q psy14342 142 GLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC---------------- 190 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~---------------- 190 (316)
..... .......+.|.|++|++ +++|++ |+++|+ .||+++++.+..
T Consensus 814 ~~~~~---~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~T 890 (5163)
T PRK12316 814 HWTCV---EEGGDSVPIGRPIANLACYILDANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRT 890 (5163)
T ss_pred EEecc---cccCCCCCCccccCCCEEEEECCCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEec
Confidence 11100 01111224556899999 888864 999999 999998876532
Q ss_pred -Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-CcEEEEEEecCCc-hhhcchHHHHH
Q psy14342 191 -NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-NLLVVVVELDGNE-SEALDLVPLVT 263 (316)
Q Consensus 191 -d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-~~~~~~v~~~~~~-~~~~~l~~~~~ 263 (316)
|.|++++ |. +||.||+||++|+||.|.|||++|.+ ||.|.+|+|++.+ +.++++++..... ...+++.+.++
T Consensus 891 GDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~-~p~V~~a~V~~~~~~~lva~vv~~~~~~~~~~~l~~~l~ 969 (5163)
T PRK12316 891 GDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLE-HPWVREAAVLAVDGKQLVGYVVLESEGGDWREALKAHLA 969 (5163)
T ss_pred CccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHh-CCCcceEEEEEcCCCeEEEEEEccCCCCCCHHHHHHHHH
Confidence 4444443 33 99999999999999999999999999 9999999999985 5678777765532 23356677777
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
+.+. .+..| ..+.+++ +||+|++||++|++|.+...
T Consensus 970 ~~Lp-~y~vP-~~i~~v~--~lP~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 970 ASLP-EYMVP-AQWLALE--RLPLTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred hhCC-CccCC-CeEEEHh--hCCCCCCCChhHHhhcCccc
Confidence 6666 44444 3455554 89999999999999986543
No 82
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-35 Score=283.20 Aligned_cols=289 Identities=16% Similarity=0.184 Sum_probs=207.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc---------CCC-CCceEEecCCcCChhhhHHHHhhhhcCcee
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE---------LYP-SRHIALCLDPYCGLGFALWVLSSVYSGHHS 70 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~---------~~~-~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~ 70 (316)
|+++|+|||||||.||+|+++|+++..++......+. +.. +++++.++|++|.+|+...++..+..|+++
T Consensus 208 ~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~ 287 (562)
T PRK12492 208 DIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHN 287 (562)
T ss_pred CeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceE
Confidence 5799999999999999999999999877766655543 223 356788899999999887777888889887
Q ss_pred eeeCCcccccChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhccccc--c-cc-----------------ccccc
Q psy14342 71 ILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMK--L-AC-----------------ELYPS 130 (316)
Q Consensus 71 v~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~--l-s~-----------------e~~~~ 130 (316)
++.... .++..+++.++++++++++..|+.+..+.............+. + .+ .+++.
T Consensus 288 ~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~ 364 (562)
T PRK12492 288 VLITNP---RDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSGGTALVKATAERWEQLTGCTIVEG 364 (562)
T ss_pred EEecCC---cCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEeccccCCHHHHHHHHHHhCCceeec
Confidence 765432 2578899999999999999889887655443221000001111 1 11 28889
Q ss_pred ccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC-----
Q psy14342 131 RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC----- 190 (316)
Q Consensus 131 yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~----- 190 (316)
||+||++......+.. .....+..+.+++|.+ +++|++ |+++|+ .|||++++.+..
T Consensus 365 YG~tE~~~~~~~~~~~----~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~ 440 (562)
T PRK12492 365 YGLTETSPVASTNPYG----ELARLGTVGIPVPGTALKVIDDDGNELPLGERGELCIKGPQVMKGYWQQPEATAEALDAE 440 (562)
T ss_pred cCccccCceeeecCCc----ccccCCccceecCCCEEEEECCCCCCCCCCCceEEEEeCCccccccccCchhhhhcccCC
Confidence 9999986433221110 0111234456899999 888864 999998 899998765432
Q ss_pred ------Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhh
Q psy14342 191 ------NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEA 255 (316)
Q Consensus 191 ------d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~ 255 (316)
|.|++++ |. .||.||+||++|++|+|.|||+.|.+ ||.|.+++|++.. +.+++++.......+.
T Consensus 441 g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 519 (562)
T PRK12492 441 GWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMA-HPKVANCAAIGVPDERSGEAVKLFVVARDPGLSV 519 (562)
T ss_pred CceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHh-CCCeeEEEEEeccCCCCCceEEEEEEeCCCCCCH
Confidence 5555543 33 89999999999999999999999999 9999999999873 3566666555443344
Q ss_pred cchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHH
Q psy14342 256 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 301 (316)
Q Consensus 256 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~ 301 (316)
+++.+.+++.+. .+..| ..+.+++ ++|+|++||++|++|++.
T Consensus 520 ~~i~~~~~~~l~-~~~~P-~~i~~~~--~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 520 EELKAYCKENFT-GYKVP-KHIVLRD--SLPMTPVGKILRRELRDI 561 (562)
T ss_pred HHHHHHHHHhcc-cccCC-cEEEEec--cCCCCCCCceeHHHHHhh
Confidence 567777777766 45554 3455554 899999999999999864
No 83
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-35 Score=280.67 Aligned_cols=296 Identities=17% Similarity=0.123 Sum_probs=210.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHH--HHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCR--SMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~--~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
++++++|||||||.||+|++||+++..+.. .+...++++++|+++.++|++|.+++.. ++.++..|+++++..+.
T Consensus 177 ~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~-~~~~l~~G~~~~~~~~~-- 253 (539)
T PRK07008 177 QASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGL-PYSAPLTGAKLVLPGPD-- 253 (539)
T ss_pred cceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHH-HHHHHhcCceEEEecCC--
Confidence 468999999999999999999999875432 2334677888999999999999877755 67888999999987543
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccC
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
.++..+++.++++++|++..+|+.+..+........ ...+.+-.++ .+++.||+||++.
T Consensus 254 -~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~ 332 (539)
T PRK07008 254 -LDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSP 332 (539)
T ss_pred -cCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccc
Confidence 268899999999999999999988765544322110 0011111111 2889999999975
Q ss_pred CCCCCCceE---EE--E-eeeccCcccccCCCce-EEecCc-------------eEEecC---CCcccCCCc-------C
Q psy14342 139 PYCGLGFAL---WV--L-SSVYSGHHSILIPPSE-VEVNPA-------------LWLSAV---SQYRVRDTF-------C 188 (316)
Q Consensus 139 ~~~~~~~~~---~~--~-~~~~~g~~~~~~~g~~-~i~d~~-------------l~v~~~---~gY~~~~~~-------~ 188 (316)
......... .. . .....+..|.++||++ +++|++ |+++|+ .|||+++.. .
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~ 412 (539)
T PRK07008 333 LGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWDGKAFGDLQVRGPWVIDRYFRGDASPLVDGWFP 412 (539)
T ss_pred cceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCCCCcceEEEEeCCccchhhcCChhhhhcCCCcc
Confidence 322211100 00 0 0000123445789988 777642 889998 899998632 2
Q ss_pred CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcch
Q psy14342 189 SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDL 258 (316)
Q Consensus 189 ~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l 258 (316)
++|.|++++ |. .||.||+||++|++|+|.|||++|.. ||.|.++++++.. +.+++++...+.. .+.+++
T Consensus 413 TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~-~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 491 (539)
T PRK07008 413 TGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVA-HPAVAEAACIACAHPKWDERPLLVVVKRPGAEVTREEL 491 (539)
T ss_pred cCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHh-CCceeEEEEEecCCchhccceEEEEEeCCCCccCHHHH
Confidence 336666654 32 99999999999999999999999999 9999999999873 3566666555432 234577
Q ss_pred HHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 259 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 259 ~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
.+++++++. .+..| ..+.+++ ++|+|++||++|++|++.+.+-
T Consensus 492 ~~~~~~~l~-~~~~P-~~i~~v~--~lP~t~sgKi~r~~l~~~~~~~ 534 (539)
T PRK07008 492 LAFYEGKVA-KWWIP-DDVVFVD--AIPHTATGKLQKLKLREQFRDY 534 (539)
T ss_pred HHHHHhhcc-cccCC-eEEEEec--CCCCCCccceeHHHHHHHHHhh
Confidence 787877776 44444 3555554 8999999999999999988763
No 84
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=5.5e-36 Score=291.88 Aligned_cols=303 Identities=11% Similarity=0.029 Sum_probs=205.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHh-cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC-ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++|+|||||||.||||++||+++..++......+ ++.++|++++++|++|++++.. .+..+..|+++.+..+..+.
T Consensus 251 d~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~ 329 (696)
T PLN02387 251 DIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLT 329 (696)
T ss_pred ceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhc
Confidence 679999999999999999999999998877766554 5788999999999999999876 44456677766654332211
Q ss_pred cC----hHHHHHHHhccceeeEEecccchhhHHhhHHhh-----------------------------------------
Q psy14342 80 VN----PALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV----------------------------------------- 114 (316)
Q Consensus 80 ~~----~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~----------------------------------------- 114 (316)
.. +..++..++++++|++..+|.++..+.......
T Consensus 330 ~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (696)
T PLN02387 330 DTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDAL 409 (696)
T ss_pred ccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHH
Confidence 10 223467889999999999998887554321100
Q ss_pred -----hhhc-cccc--ccc------------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-E
Q psy14342 115 -----TSLC-RSMK--LAC------------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-V 167 (316)
Q Consensus 115 -----~~~~-~~~~--ls~------------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~ 167 (316)
.... ..++ +++ .+.+.||+||++.......+ .....|..|.|+||++ +
T Consensus 410 ~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~-----~~~~~gsvG~p~p~~evk 484 (696)
T PLN02387 410 VFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEW-----DDTSVGRVGPPLPCCYVK 484 (696)
T ss_pred HHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEeechhhcccceeecCc-----ccCCCCccCCCCCceEEE
Confidence 0000 0111 111 27889999999754433322 1122344556899999 8
Q ss_pred Eec---------------CceEEecC---CCcccCCCcCCC---------------Cceeeec-Cc---CCcccceeEE-
Q psy14342 168 EVN---------------PALWLSAV---SQYRVRDTFCSC---------------NGALYQG-AE---RLALDETIML- 209 (316)
Q Consensus 168 i~d---------------~~l~v~~~---~gY~~~~~~~~~---------------d~g~~~~-g~---~GR~dd~i~~- 209 (316)
++| ++|+++|| .|||++++.+.+ |.|++++ |. +||.||+||+
T Consensus 485 ivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~ 564 (696)
T PLN02387 485 LVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQ 564 (696)
T ss_pred EeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECC
Confidence 876 22999999 999999876543 3333332 32 9999999997
Q ss_pred CCcccChHhHHHHHHHhccccceeEEEeeCC--cEEEEEEecCCch------------h------hcchHHHHHHHHHH-
Q psy14342 210 RGMRYHPIDIENSVMRAHKKIAECAVFTWTN--LLVVVVELDGNES------------E------ALDLVPLVTNAVLE- 268 (316)
Q Consensus 210 ~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~~--~~~~~v~~~~~~~------------~------~~~l~~~~~~~l~~- 268 (316)
+|++|+|.|||++|.+ ||.|.+|+|++.+. .+++++.+.+... + ..++.+.+.+.+.+
T Consensus 565 ~Ge~I~p~eIE~~l~~-~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 643 (696)
T PLN02387 565 HGEYVSLGKVEAALSV-SPYVDNIMVHADPFHSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKA 643 (696)
T ss_pred CCeEEchHHHHHHHhc-CCCeeEEEEEecCCcceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHH
Confidence 6999999999999999 99999999999863 4566666653210 0 11233333333321
Q ss_pred -------hcCeeecEEEEEcCC----CcccCCCchhhHHHHHHHHHcCCCCcchh
Q psy14342 269 -------EHHLIVGVAVVVDPG----VVPINSRGEKQRMHLRDGFLADQLDPIYV 312 (316)
Q Consensus 269 -------~~~~~~~~~~~~~~~----~lP~t~~gKi~r~~l~~~~~~~~~~~~~~ 312 (316)
.++.+ ..+.++... .=-.|++.|++|+.+++.|++ +++.+|+
T Consensus 644 ~~~~~l~~~e~~-~~i~l~~~~~t~~~g~lT~t~K~~R~~i~~~y~~-~i~~ly~ 696 (696)
T PLN02387 644 AKAARLEKFEIP-AKIKLLPEPWTPESGLVTAALKLKREQIRKKFKD-DLKKLYE 696 (696)
T ss_pred HHHcCCCCccee-eEEEEECCCCCCCCCcCChhhhhhhHHHHHHHHH-HHHHHhC
Confidence 22233 455555421 123799999999999999997 8888874
No 85
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.8e-35 Score=282.35 Aligned_cols=294 Identities=16% Similarity=0.132 Sum_probs=217.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.++|+++..++......+++.++|+++.++|++|.+|++..++.++..|+++++.... .
T Consensus 200 ~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~---~ 276 (559)
T PRK08315 200 DPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEG---F 276 (559)
T ss_pred CcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCC---C
Confidence 4789999999999999999999999998888888899999999999999999999988889999999999865432 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc------------------cccccccchhccCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
+|..+++.++++++++++.+|+.+..+........ ...+.+-+.+ .+++.||+||++..
T Consensus 277 ~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~ 356 (559)
T PRK08315 277 DPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPV 356 (559)
T ss_pred CHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccc
Confidence 78899999999999999999988765443221100 0011111111 27788999998653
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcC-----------CCCc
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFC-----------SCNG 192 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~-----------~~d~ 192 (316)
........ ......++.|.++||++ .++|++ |+++|+ .|||+++..+ ++|.
T Consensus 357 ~~~~~~~~--~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~ 434 (559)
T PRK08315 357 STQTRTDD--PLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDL 434 (559)
T ss_pred eeecCccc--chhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccce
Confidence 32211100 00011234455899999 887743 899999 8999987543 2255
Q ss_pred eeee-cCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHH
Q psy14342 193 ALYQ-GAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLV 262 (316)
Q Consensus 193 g~~~-~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~ 262 (316)
|+++ +|. .||.||+||++|++|+|.|||++|.+ +|+|.+++|++.. +.+++++...+.. .+..++.+.+
T Consensus 435 ~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l 513 (559)
T PRK08315 435 AVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYT-HPKIQDVQVVGVPDEKYGEEVCAWIILRPGATLTEEDVRDFC 513 (559)
T ss_pred EEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHh-CCCceEEEEEecCCCCCCeEEEEEEEeCCCCCCCHHHHHHHH
Confidence 6654 343 89999999999999999999999999 9999999999873 3466666655432 2335677777
Q ss_pred HHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 263 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 263 ~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
++.+. .+..| ..+.+++ ++|+|++||++|.+|++...+
T Consensus 514 ~~~l~-~~~~P-~~i~~v~--~lP~t~~GK~~r~~L~~~~~~ 551 (559)
T PRK08315 514 RGKIA-HYKIP-RYIRFVD--EFPMTVTGKIQKFKMREMMIE 551 (559)
T ss_pred Hhhcc-cccCC-cEEEEcc--cCCCCCCCceeHHHHHHHHHh
Confidence 76666 44444 4555554 899999999999999998765
No 86
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-35 Score=282.87 Aligned_cols=298 Identities=17% Similarity=0.145 Sum_probs=217.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcC-CCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACEL-YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~-~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
++++++|||||||.||+|.++|+++...+......+++ ..+|+++.++|++|.+|+.. ++.++..|+++++.+...+
T Consensus 175 ~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~v~~~~~~~- 252 (542)
T PRK07786 175 SPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGS-MLPGLLLGAPTVIYPLGAF- 252 (542)
T ss_pred CeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHH-HHHHHHccCEEEEccCCCc-
Confidence 47899999999999999999999999888887777887 57788899999999988865 8899999999998754332
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh--hcccccccc------------------cccccccchhccCC
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS--LCRSMKLAC------------------ELYPSRHIALCLDP 139 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~--~~~~~~ls~------------------e~~~~yG~te~~~~ 139 (316)
+|..+++.+++++++.++.+|+++..+......... ..+.+..++ .+++.||+||++..
T Consensus 253 -~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~ 331 (542)
T PRK07786 253 -DPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRDLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPV 331 (542)
T ss_pred -CHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccCcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccc
Confidence 789999999999999999999988765443221110 001011111 27889999998643
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC----------CCcee
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS----------CNGAL 194 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~----------~d~g~ 194 (316)
........ .....++.|.+++|.. .++|++ |+++|+ .||+++++.+. +|.++
T Consensus 332 ~~~~~~~~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~ 408 (542)
T PRK07786 332 TCMLLGED---AIRKLGSVGKVIPTVAARVVDENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVR 408 (542)
T ss_pred eEecCccc---ccccCCCccccCCCceEEEECCCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEE
Confidence 22111100 0112234556899998 887753 899999 89999876543 35666
Q ss_pred eec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc--hhhcchHHHHH
Q psy14342 195 YQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE--SEALDLVPLVT 263 (316)
Q Consensus 195 ~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~--~~~~~l~~~~~ 263 (316)
+++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.+++++...+.. ....++.+.++
T Consensus 409 ~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~ 487 (542)
T PRK07786 409 QDEEGYVWVVDRKKDMIISGGENIYCAEVENVLAS-HPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAALTLEDLAEFLT 487 (542)
T ss_pred EcCCceEEEEecccceEEeCCEEECHHHHHHHHHh-CCCccEEEEEeccCcccCceEEEEEEECCCCCCCCHHHHHHHHH
Confidence 643 43 89999999999999999999999999 9999999999873 3455555554432 22245666666
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCCc
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDP 309 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~~ 309 (316)
+.+. .+..| ..+.++. ++|+|++||++|++|++.|.+.....
T Consensus 488 ~~l~-~~~~P-~~i~~v~--~iP~t~~GKv~r~~L~~~~~~~~~~~ 529 (542)
T PRK07786 488 DRLA-RYKHP-KALEIVD--ALPRNPAGKVLKTELRERYGACVNVE 529 (542)
T ss_pred hhcc-CCCCC-CEEEEec--cCCCCCcccccHHHHHHHHHhhhchh
Confidence 6555 34333 3555554 89999999999999999999866443
No 87
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.9e-35 Score=281.49 Aligned_cols=292 Identities=14% Similarity=0.150 Sum_probs=208.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCC----CCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELY----PSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 76 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~----~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~ 76 (316)
++++|+|||||||.||+|.++|+++..++.. ..++.. ..++.+.++|++|.+|+...++.++..|+++++.+..
T Consensus 185 ~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~ 262 (546)
T PLN02330 185 DLCALPFSSGTTGISKGVMLTHRNLVANLCS--SLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRF 262 (546)
T ss_pred cEEEEEeCCCCcCCCcEEEEehHHHHHHHHH--HhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEeccc
Confidence 5789999999999999999999998876543 233333 3467889999999999887788899999999887643
Q ss_pred ccccChHHHHHHHhccceeeEEecccchhhHHhhHHh--h--hhh-cccccccc------------------cccccccc
Q psy14342 77 EVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA--V--TSL-CRSMKLAC------------------ELYPSRHI 133 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~--~--~~~-~~~~~ls~------------------e~~~~yG~ 133 (316)
++..+++.+++++++.+..+|+++..+...... . ... .+.+-..+ .+++.||+
T Consensus 263 ----~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~ 338 (546)
T PLN02330 263 ----ELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGL 338 (546)
T ss_pred ----CHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccc
Confidence 578899999999999999999988765442211 0 000 01111111 38889999
Q ss_pred hhccCCCCCCC-ceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcCCC------
Q psy14342 134 ALCLDPYCGLG-FALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFCSC------ 190 (316)
Q Consensus 134 te~~~~~~~~~-~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~~~------ 190 (316)
||++....... +... ......++.|.++||++ .++|++ |+++|+ .|||+++..+..
T Consensus 339 tE~~~~~~~~~~~~~~-~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g 417 (546)
T PLN02330 339 TEHSCITLTHGDPEKG-HGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDG 417 (546)
T ss_pred cccccceecCCCcccc-ccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccCccchhhhccCCC
Confidence 99864322111 1000 00111234455899999 777632 999999 899998766532
Q ss_pred -----Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhh
Q psy14342 191 -----NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEA 255 (316)
Q Consensus 191 -----d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~ 255 (316)
|.|++++ |. .||.||+|+++|++|+|.|||++|.+ ||.|.+++|+++. +.++++++..+.. .+.
T Consensus 418 ~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~ 496 (546)
T PLN02330 418 WLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLT-HPSVEDAAVVPLPDEEAGEIPAACVVINPKAKESE 496 (546)
T ss_pred ceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHh-CCchheEEEEeccccccCceeEEEEEECCCCCCCH
Confidence 5555543 33 99999999999999999999999999 9999999999873 3566666665432 233
Q ss_pred cchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 256 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 256 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++.+.+++.+. .+..+ ..+.++ +++|+|++||++|++|++.+..
T Consensus 497 ~~l~~~~~~~l~-~~~~p-~~~~~v--~~iP~t~~GK~~r~~L~~~~~~ 541 (546)
T PLN02330 497 EDILNFVAANVA-HYKKV-RVVQFV--DSIPKSLSGKIMRRLLKEKMLS 541 (546)
T ss_pred HHHHHHHHHhcc-cccCc-eEEEEe--ccCCCCCCcceeHHHHHHHHHh
Confidence 567777776666 34443 334444 4899999999999999999865
No 88
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.2e-36 Score=334.30 Aligned_cols=300 Identities=16% Similarity=0.129 Sum_probs=216.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++|||+|||||||.||||+++|+++...+......+++.++|+++.+.|++|+.+++. ++.++..|+++++.++.. ..
T Consensus 1719 ~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~lvi~~~~~-~~ 1796 (3956)
T PRK12467 1719 NLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSVWE-LFWPLINGARLVIAPPGA-HR 1796 (3956)
T ss_pred CcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHHH-HHHHHhCCCEEEEcChhh-cC
Confidence 5799999999999999999999999999988889999999999999999999999876 899999999999987653 45
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh--hhcccccccc------------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT--SLCRSMKLAC------------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~--~~~~~~~ls~------------------e~~~~yG~te~~~~~ 140 (316)
+|..+++.++++++|++..+|+++..+........ ...+.+-+++ .+++.||+||++...
T Consensus 1797 ~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~ 1876 (3956)
T PRK12467 1797 DPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDV 1876 (3956)
T ss_pred CHHHHHHHHHHcCCeEEECCHHHHHHHHhhccccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeE
Confidence 78999999999999999999999876654211100 0111222222 278899999986432
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC---------------
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC--------------- 190 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~--------------- 190 (316)
................+.|.|++|.+ .+.|++ |+++|+ .||+++++.++.
T Consensus 1877 t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~y 1956 (3956)
T PRK12467 1877 THWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLY 1956 (3956)
T ss_pred EEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccce
Confidence 21110000000011224566899999 888764 999999 899998765432
Q ss_pred ---Cceeee-cCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC----CcEEEEEEecCCchh-----
Q psy14342 191 ---NGALYQ-GAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT----NLLVVVVELDGNESE----- 254 (316)
Q Consensus 191 ---d~g~~~-~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~----~~~~~~v~~~~~~~~----- 254 (316)
|.|+++ +|. +||.||+||++|++|.|.|||++|.+ ||.|.+|+|++.. +++++++........
T Consensus 1957 rTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~-~p~V~~a~vv~~~~~~~~~lva~vv~~~~~~~~~~~~ 2035 (3956)
T PRK12467 1957 RTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLRE-QGGVREAVVIAQDGANGKQLVAYVVPTDPGLVDDDEA 2035 (3956)
T ss_pred eccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHh-CCCcceEEEEEecCCCCcEEEEEEEecCccccccccc
Confidence 444443 343 99999999999999999999999999 9999999999884 367777765443211
Q ss_pred hcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHH
Q psy14342 255 ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFL 303 (316)
Q Consensus 255 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~ 303 (316)
.....+.+++.+.+.......+..++..+++|+|++||++|++|.+.+.
T Consensus 2036 ~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~GKidr~~L~~~~~ 2084 (3956)
T PRK12467 2036 QVALRAILKNHLKASLPEYMVPAHLVFLARMPLTPNGKLDRKALPAPDA 2084 (3956)
T ss_pred ccccHHHHHHHHHhhCchhhCchhhhhhhcCCCCCCCCcchhhCCCCcc
Confidence 1112333444444332222223344455589999999999999986543
No 89
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.4e-36 Score=337.87 Aligned_cols=300 Identities=15% Similarity=0.100 Sum_probs=219.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++|||+|||||||.||||+++|+++...+......+++.++|+++.+.|++|+.+.+. ++.++..|+++++.++..+
T Consensus 4695 ~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~lvi~~~~~~-- 4771 (5163)
T PRK12316 4695 NLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGERYELTPDDRVLQFMSFSFDGSHEG-LYHPLINGASVVIRDDSLW-- 4771 (5163)
T ss_pred ceEEEEECCCCCCCCCEeeeccHHHHHHHHHHHHhcCCCcCCeEEEecCcchhhHHHH-HHHHHhCCCEEEEcCcccC--
Confidence 5799999999999999999999999999999889999999999999999999988876 8999999999999765543
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhh--hhhcccccccc------------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV--TSLCRSMKLAC------------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~--~~~~~~~~ls~------------------e~~~~yG~te~~~~~ 140 (316)
+|..+++.++++++|+++.+|+++..+....... ....+.+-+++ .+++.||+||++...
T Consensus 4772 ~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 4851 (5163)
T PRK12316 4772 DPERLYAEIHEHRVTVLVFPPVYLQQLAEHAERDGEPPSLRVYCFGGEAVAQASYDLAWRALKPVYLFNGYGPTETTVTV 4851 (5163)
T ss_pred CHHHHHHHHHHcCCEEEEcCHHHHHHHHhhhccccCCCCccEEEEecccCCHHHHHHHHHhCCCCEEEecccCccceEEE
Confidence 7899999999999999999999887665433211 00111122222 288899999997532
Q ss_pred CCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC---------------
Q psy14342 141 CGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC--------------- 190 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~--------------- 190 (316)
................+.|.|++|.+ +++|++ |+++|+ .|||++++.+..
T Consensus 4852 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~g~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~y 4931 (5163)
T PRK12316 4852 LLWKARDGDACGAAYMPIGTPLGNRSGYVLDGQLNPLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGGRLY 4931 (5163)
T ss_pred EEEEcccccccCCCCCcccccccCCEEEEECCCCCcCCCCCCceEEECCcccchhhcCChhhhhhhccCCCCCCCCccee
Confidence 21110000000011224556899999 888754 999999 999998865422
Q ss_pred ---Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC----CcEEEEEEecCCch-h----
Q psy14342 191 ---NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT----NLLVVVVELDGNES-E---- 254 (316)
Q Consensus 191 ---d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~----~~~~~~v~~~~~~~-~---- 254 (316)
|.|++++ |. +||.||+||++|++|.|.|||++|.+ ||.|.+|+|++.. +++++++....... +
T Consensus 4932 rTGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~-~p~V~~a~v~~~~~~~~~~l~a~v~~~~~~~~~~~~~ 5010 (5163)
T PRK12316 4932 RTGDLARYRADGVIDYLGRVDHQVKIRGFRIELGEIEARLRE-HPAVREAVVIAQEGAVGKQLVGYVVPQDPALADADEA 5010 (5163)
T ss_pred ecCceeEECCCCcEEEeccccceEeeccEeecHHHHHHHHHh-CCCcceEEEEEeeCCCCcEEEEEEeCCcccccccccc
Confidence 4555543 33 99999999999999999999999999 9999999999873 35777766543221 1
Q ss_pred hcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 255 ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 255 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
..++.+.+++.+.+.......+..++.++++|+|++||++|++|.+.+.+
T Consensus 5011 ~~~~~~~l~~~l~~~lp~y~vP~~~~~~~~lP~t~~GKvdR~~L~~~~~~ 5060 (5163)
T PRK12316 5011 QAELRDELKAALRERLPEYMVPAHLVFLARMPLTPNGKLDRKALPQPDAS 5060 (5163)
T ss_pred chhhHHHHHHHHhccCchhhCCcceeecccCCCCCCcccChhhcCCcccc
Confidence 12344555555554332222233445555899999999999999877654
No 90
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.9e-35 Score=281.93 Aligned_cols=294 Identities=14% Similarity=0.110 Sum_probs=200.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|+++|+++..........+.....++++..+|++|..|+.. .+.++..|+++++....
T Consensus 187 d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~~~~g~~~v~~~~~---- 261 (579)
T PLN03102 187 DPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTF-TWGTAARGGTSVCMRHV---- 261 (579)
T ss_pred CcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhH-HHHHHHhcCcEEeeccC----
Confidence 5799999999999999999999987655444344455666778888899999999876 67788889998887532
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccccccc----------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLAC----------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls~----------------e~~~~yG~te~~~~~~ 141 (316)
++..+++.++++++|++.++|+++..+......... ..+.+-.++ .+++.||+||++....
T Consensus 262 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~ 341 (579)
T PLN03102 262 TAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGLTEATGPVL 341 (579)
T ss_pred ChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHHcCCeEEeecCccccCcccc
Confidence 467789999999999999999998766543221000 001111111 3888999999875322
Q ss_pred CCC--------ceEEEEe-eeccCcccccCCCce-EE------e--c----CceEEecC---CCcccCCCcCCC------
Q psy14342 142 GLG--------FALWVLS-SVYSGHHSILIPPSE-VE------V--N----PALWLSAV---SQYRVRDTFCSC------ 190 (316)
Q Consensus 142 ~~~--------~~~~~~~-~~~~g~~~~~~~g~~-~i------~--d----~~l~v~~~---~gY~~~~~~~~~------ 190 (316)
... +...... ....|..+.++++++ +. + + ++|+++|+ .|||++++.+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw 421 (579)
T PLN03102 342 FCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFKHGW 421 (579)
T ss_pred ccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhhccCc
Confidence 110 0000000 001111111222222 11 1 1 23999999 999998766532
Q ss_pred ----Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchh---
Q psy14342 191 ----NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESE--- 254 (316)
Q Consensus 191 ----d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~--- 254 (316)
|.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.+++++.+......
T Consensus 422 ~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~-~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~ 500 (579)
T PLN03102 422 LNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYK-YPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKED 500 (579)
T ss_pred eecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHh-CCCcceeEEEeccCccccceeEEEEEecCccccccc
Confidence 5566644 32 99999999999999999999999999 9999999999983 467777766543221
Q ss_pred --------hcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 255 --------ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 255 --------~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
..++.++++..+. .+..| ..+.+++ ++|+|++||++|++|++...+
T Consensus 501 ~~~~~~~~~~~l~~~~~~~L~-~~~~P-~~i~~~~--~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 501 RVDKLVTRERDLIEYCRENLP-HFMCP-RKVVFLQ--ELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred ccccccccHHHHHHHHHhhcc-cccCC-eEEEEcc--cCCCCCcccccHHHHHHHHHH
Confidence 2345666666655 45554 3455554 899999999999999988654
No 91
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.7e-35 Score=286.95 Aligned_cols=302 Identities=12% Similarity=0.040 Sum_probs=209.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHh-----cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC-----ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 75 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~ 75 (316)
|+++|+|||||||.||||++||+++...+.+....+ ++.++|++++++|++|.++++. .+.++..|+++++...
T Consensus 221 d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~ 299 (660)
T PLN02430 221 DICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG 299 (660)
T ss_pred ceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC
Confidence 689999999999999999999999988776654322 4678899999999999999887 4667889999887642
Q ss_pred cccccChHHHHHHHhccceeeEEecccchhhHHhhHHh-h-----------------------------------h----
Q psy14342 76 SEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA-V-----------------------------------T---- 115 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~-~-----------------------------------~---- 115 (316)
++..+++.++++++|++..+|.++..+...... . .
T Consensus 300 -----~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ 374 (660)
T PLN02430 300 -----DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAF 374 (660)
T ss_pred -----ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHH
Confidence 466789999999999999999887644321100 0 0
Q ss_pred ----hhc-cccc--ccc------------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEe
Q psy14342 116 ----SLC-RSMK--LAC------------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEV 169 (316)
Q Consensus 116 ----~~~-~~~~--ls~------------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~ 169 (316)
... ..+. +++ .+++.||+||++.......+. .....|..|.+.||++ ++.
T Consensus 375 ~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~----~~~~~gsvG~p~~~~evki~ 450 (660)
T PLN02430 375 RKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPD----EMCMLGTVGAPAVYNELRLE 450 (660)
T ss_pred HHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccc----cCCCCCCccCCCCceEEEEE
Confidence 000 0111 111 167899999987544322221 1112344556899999 775
Q ss_pred c--------------CceEEecC---CCcccCCCcCCC----------Cceeee-cCc---CCcccceeEE-CCcccChH
Q psy14342 170 N--------------PALWLSAV---SQYRVRDTFCSC----------NGALYQ-GAE---RLALDETIML-RGMRYHPI 217 (316)
Q Consensus 170 d--------------~~l~v~~~---~gY~~~~~~~~~----------d~g~~~-~g~---~GR~dd~i~~-~G~~v~p~ 217 (316)
| ++|+++|+ .|||++++.+.. |.|+++ +|. .||.||+||. +|++|+|.
T Consensus 451 d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~ 530 (660)
T PLN02430 451 EVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALE 530 (660)
T ss_pred EcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchH
Confidence 4 23999999 899999877643 455554 343 9999999996 79999999
Q ss_pred hHHHHHHHhccccceeEEEeeC--CcEEEEEEecCCch-----------------hhcchHHHHHHHHHHh---cCe---
Q psy14342 218 DIENSVMRAHKKIAECAVFTWT--NLLVVVVELDGNES-----------------EALDLVPLVTNAVLEE---HHL--- 272 (316)
Q Consensus 218 eIE~~l~~~~p~v~~~~v~~~~--~~~~~~v~~~~~~~-----------------~~~~l~~~~~~~l~~~---~~~--- 272 (316)
+||++|.+ ||.|.+|+|+|.. +.+++++++.+... ...++.+.+.+.+.+. .++
T Consensus 531 ~IE~~l~~-~p~V~~~~V~G~~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~ 609 (660)
T PLN02430 531 YLENVYGQ-NPIVEDIWVYGDSFKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGF 609 (660)
T ss_pred HHHHHHhc-CCCeeEEEEEecCCcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCc
Confidence 99999999 9999999999975 35677776653210 0122343343333211 111
Q ss_pred -eecEEEEEcC----CCcccCCCchhhHHHHHHHHHcCCCCcchhhc
Q psy14342 273 -IVGVAVVVDP----GVVPINSRGEKQRMHLRDGFLADQLDPIYVAY 314 (316)
Q Consensus 273 -~~~~~~~~~~----~~lP~t~~gKi~r~~l~~~~~~~~~~~~~~~~ 314 (316)
.+..+.+... +.=.+|+++|++|+.+.+.|++ .++.+|+..
T Consensus 610 e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~-~i~~ly~~~ 655 (660)
T PLN02430 610 EYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQV-EIDEMYRKL 655 (660)
T ss_pred eeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHH-HHHHHHHhh
Confidence 1233444431 1225899999999999999998 899898654
No 92
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-35 Score=281.61 Aligned_cols=294 Identities=16% Similarity=0.097 Sum_probs=209.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHH-HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKL-ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~-~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
++++|+|||||||.||+|.+||+++...+..... ...+.++|+++.++|++|.+|+...++.++..|+++++.++.
T Consensus 210 ~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~--- 286 (567)
T PRK06178 210 ALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARW--- 286 (567)
T ss_pred CeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCC---
Confidence 5799999999999999999999998876554433 356778899999999999999877788999999999998632
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccc-------cccc------------ccc-ccccchhc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSM-------KLAC------------ELY-PSRHIALC 136 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~-------~ls~------------e~~-~~yG~te~ 136 (316)
++..++..+++++++..+.+|+.+..+........ ...+.+ .++. .+. ..||+||+
T Consensus 287 -~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~ 365 (567)
T PRK06178 287 -DAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTET 365 (567)
T ss_pred -CHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccc
Confidence 68899999999999988888777654433211000 000000 0000 122 47999998
Q ss_pred cCCCCCCCc--eEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcCCC--------
Q psy14342 137 LDPYCGLGF--ALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFCSC-------- 190 (316)
Q Consensus 137 ~~~~~~~~~--~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~~~-------- 190 (316)
+........ ..........+..|.++||++ +++|++ |+++|+ .|||++++.+..
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~ 445 (567)
T PRK06178 366 HTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLH 445 (567)
T ss_pred cccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCcccccccCChhhhhhcccCCcee
Confidence 643222111 000000011223456899999 888732 999999 899998765432
Q ss_pred --Cceeee-cCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee-----CCcEEEEEEecCCc-hhhcch
Q psy14342 191 --NGALYQ-GAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE-SEALDL 258 (316)
Q Consensus 191 --d~g~~~-~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~-----~~~~~~~v~~~~~~-~~~~~l 258 (316)
|.|+++ +|. +||.||+|+++|++|+|.|||++|.+ +|.|.++++++. ++.++++++..+.. .+.+++
T Consensus 446 TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l 524 (567)
T PRK06178 446 TGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQ-HPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADLTAAAL 524 (567)
T ss_pred ecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHh-CCCeeEEEEEcCcCcccCcceEEEEEeCCCCcCCHHHH
Confidence 555554 343 99999999999999999999999999 999999999986 34677777665432 234566
Q ss_pred HHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 259 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 259 ~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+.+++.+. .+..+ . +.++ +++|+|++||++|++|++.+.+
T Consensus 525 ~~~~~~~l~-~~~~p-~-i~~v--~~iP~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 525 QAWCRENMA-VYKVP-E-IRIV--DALPMTATGKVRKQDLQALAEE 565 (567)
T ss_pred HHHHHhcCc-ccCCc-e-EEEe--ccCCCCCccceeHHHHHHHHHh
Confidence 777776665 44554 2 4454 4899999999999999998864
No 93
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.4e-35 Score=280.86 Aligned_cols=293 Identities=15% Similarity=0.096 Sum_probs=213.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|.++|.++......+...+++.++|+++.++|++|.+|++..++.++..|+++++.+..
T Consensus 188 d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~---- 263 (547)
T PRK06087 188 ELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIF---- 263 (547)
T ss_pred CeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCC----
Confidence 5799999999999999999999999888888888888999999999999999999988888999999999987643
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccccccc----------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLAC----------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls~----------------e~~~~yG~te~~~~~~ 141 (316)
++..+++.++++++++++..|+.+..+......... ..+.+-..+ .+++.||+||++....
T Consensus 264 ~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~ 343 (547)
T PRK06087 264 TPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAV 343 (547)
T ss_pred CHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHcCCcEEEEecccccCCccc
Confidence 688999999999999888777766544332211100 011111111 2888999999875332
Q ss_pred CCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC-----------CCCceee
Q psy14342 142 GLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC-----------SCNGALY 195 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~-----------~~d~g~~ 195 (316)
...... .....+..+.+++|+. +++|++ |+++|+ .|||++++.+ ++|.|++
T Consensus 344 ~~~~~~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~ 420 (547)
T PRK06087 344 VNLDDP---LSRFMHTDGYAAAGVEIKVVDEARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRM 420 (547)
T ss_pred cCCCcc---hhhcCCcCCccCCCceEEEEcCCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEE
Confidence 211100 0011123445789998 777753 899999 8999986553 2255555
Q ss_pred ec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCC--chhhcchHHHHHH
Q psy14342 196 QG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGN--ESEALDLVPLVTN 264 (316)
Q Consensus 196 ~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~--~~~~~~l~~~~~~ 264 (316)
++ |. .||.||+|+.+|++|+|.+||++|.+ +|.|.++++++.. +++++++..... ..+.+++.+.+++
T Consensus 421 ~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~ 499 (547)
T PRK06087 421 DEAGYIKITGRKKDIIVRGGENISSREVEDILLQ-HPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLTLEEVVAFFSR 499 (547)
T ss_pred CCCCCEEEEecchhhhhcCCEEECHHHHHHHHHh-CCCeeEEEEEecCCCCcCceEEEEEEECCCCCCCCHHHHHHHHHh
Confidence 43 33 99999999999999999999999999 9999999999873 467777766542 1222445555443
Q ss_pred HHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 265 AVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 265 ~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.....+..| ..+.+++ +||+|++||++|++|++.+.+
T Consensus 500 ~~l~~~~~P-~~i~~v~--~iP~t~sGK~~r~~l~~~~~~ 536 (547)
T PRK06087 500 KRVAKYKYP-EHIVVID--KLPRTASGKIQKFLLRKDIMR 536 (547)
T ss_pred ccccccCCC-eEEEEec--cCCCCCCCcCcHHHHHHHHHH
Confidence 222234443 4566665 899999999999999998876
No 94
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-35 Score=283.75 Aligned_cols=305 Identities=10% Similarity=0.019 Sum_probs=210.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCC---CCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYP---SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE 77 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~---~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~ 77 (316)
|+++|+|||||||.||||++||+++..+.......+...+ .++.+.++|++|.+|+...++.++..|+++++.+...
T Consensus 221 d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~ 300 (624)
T PRK12582 221 TVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKP 300 (624)
T ss_pred ceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCc
Confidence 5799999999999999999999999887776665555544 5789999999999998877788999999998865322
Q ss_pred cccChHHHHHHHhccceeeEEecccchhhHHhhHHhh-------hhhcccccccc-----------------------cc
Q psy14342 78 VEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-------TSLCRSMKLAC-----------------------EL 127 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-------~~~~~~~~ls~-----------------------e~ 127 (316)
.......+++.++++++|+++.+|.++..+....... ....+.+-.++ .+
T Consensus 301 ~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l 380 (624)
T PRK12582 301 LPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPF 380 (624)
T ss_pred ccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceE
Confidence 1112234567788999999999998876553321100 00011111111 25
Q ss_pred cccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecC----ceEEecC---CCcccCCCcCCC---------
Q psy14342 128 YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNP----ALWLSAV---SQYRVRDTFCSC--------- 190 (316)
Q Consensus 128 ~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~----~l~v~~~---~gY~~~~~~~~~--------- 190 (316)
++.||+||++........ .....+..|.++||++ +++++ +|+++|+ .|||++++.+..
T Consensus 381 ~~~YG~TE~~~~~~~~~~-----~~~~~~svG~p~pg~~v~i~~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~ 455 (624)
T PRK12582 381 YTGYGATETAPTTTGTHW-----DTERVGLIGLPLPGVELKLAPVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYR 455 (624)
T ss_pred EeccccccccceeecccC-----CCCCCCCCCcCCCCcEEEEccCCCceEEEEECCcccccccCCccchhhhcCccCCcc
Confidence 678999998643321111 1112334556899999 77643 3999999 899999876542
Q ss_pred --Cceee-e----cCc---CCcccceeEE-CCcccChHhHH--HHHHHhccccceeEEEeeCC-cEEEEEEecCCc----
Q psy14342 191 --NGALY-Q----GAE---RLALDETIML-RGMRYHPIDIE--NSVMRAHKKIAECAVFTWTN-LLVVVVELDGNE---- 252 (316)
Q Consensus 191 --d~g~~-~----~g~---~GR~dd~i~~-~G~~v~p~eIE--~~l~~~~p~v~~~~v~~~~~-~~~~~v~~~~~~---- 252 (316)
|.|++ + +|. +||.||+|++ +|++|+|.+|| .++.+ ||.|.+|+|+|.++ ...+++++....
T Consensus 456 TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~-~p~V~~a~VvG~~~~~~g~lv~p~~~~~~~~ 534 (624)
T PRK12582 456 LGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAAC-SPVIHDAVVAGQDRAFIGLLAWPNPAACRQL 534 (624)
T ss_pred ccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhc-CcchheEEEEcCCCCcEEEEEecCHHHHHHH
Confidence 66666 3 133 9999999995 89999998885 67788 99999999999965 344444432110
Q ss_pred -----------hhhcchHHHHHHHHHHhc------C-eeecEEEEEcCC----CcccCCCchhhHHHHHHHHHcCCCCcc
Q psy14342 253 -----------SEALDLVPLVTNAVLEEH------H-LIVGVAVVVDPG----VVPINSRGEKQRMHLRDGFLADQLDPI 310 (316)
Q Consensus 253 -----------~~~~~l~~~~~~~l~~~~------~-~~~~~~~~~~~~----~lP~t~~gKi~r~~l~~~~~~~~~~~~ 310 (316)
.+.+++.+.++..+.+.. . .+ ..+.+++.. ..+.|++||++|+++.+.|++ +++.+
T Consensus 535 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~-~i~~l 612 (624)
T PRK12582 535 AGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRI-ARALLMTEPPSIDAGEITDKGYINQRAVLERRAA-LVERL 612 (624)
T ss_pred HhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhhe-EEEEEeCCCCCccCCcCCccccccHHHHHHHHHH-HHHHH
Confidence 022467777777776432 1 32 355555521 245788999999999999997 89989
Q ss_pred hhh
Q psy14342 311 YVA 313 (316)
Q Consensus 311 ~~~ 313 (316)
|+.
T Consensus 613 y~~ 615 (624)
T PRK12582 613 YAE 615 (624)
T ss_pred hcC
Confidence 864
No 95
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.8e-35 Score=330.69 Aligned_cols=297 Identities=15% Similarity=0.070 Sum_probs=217.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++|||+|||||||.||||+++|+++...+......+++.++|+++...|++|+.+.+. ++.++..|+++++++... ..
T Consensus 3870 ~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~-~~~~l~~G~~l~i~~~~~-~~ 3947 (4334)
T PRK05691 3870 NLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQ-FLAAPLFGARVEIVPNAI-AH 3947 (4334)
T ss_pred ceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHH-HHHHHhCCCEEEEcCccc-cC
Confidence 5799999999999999999999999999999889999999999999999999999887 899999999999876543 45
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc------------------cccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC------------------ELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~------------------e~~~~yG~te~~~~~~~ 142 (316)
+|..+++.++++++|++..+|+.+..+...........+.+-+++ .+++.||+||++.....
T Consensus 3948 ~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~ 4027 (4334)
T PRK05691 3948 DPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAF 4027 (4334)
T ss_pred CHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEE
Confidence 788999999999999999999988655432211111112222222 27889999998643221
Q ss_pred CCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC-----------------
Q psy14342 143 LGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC----------------- 190 (316)
Q Consensus 143 ~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~----------------- 190 (316)
...... .......|.|.|+++.+ .++|++ |+++|+ .|||++++.|..
T Consensus 4028 ~~~~~~-~~~~~~~~iG~p~~~~~~~v~d~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrT 4106 (4334)
T PRK05691 4028 FRVDLA-STRGSYLPIGSPTDNNRLYLLDEALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRT 4106 (4334)
T ss_pred EEcccc-cccCCcCCCCCccCCCEEEEECCCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeecc
Confidence 110000 00001124556899999 887754 999999 999999877642
Q ss_pred -Cceeee-cCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee----CCcEEEEEEecCCchhhcchHHH
Q psy14342 191 -NGALYQ-GAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW----TNLLVVVVELDGNESEALDLVPL 261 (316)
Q Consensus 191 -d~g~~~-~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~----~~~~~~~v~~~~~~~~~~~l~~~ 261 (316)
|.+.+. +|. +||.||+||++|.+|.+.|||++|.+ +|+|.+|+|+.. ++.+++++..........++.+.
T Consensus 4107 GDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~-~~~v~~a~v~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~ 4185 (4334)
T PRK05691 4107 GDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHE-QAEVREAAVAVQEGVNGKHLVGYLVPHQTVLAQGALLER 4185 (4334)
T ss_pred CcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHh-CCCccEEEEEEecCCCCcEEEEEEeCCcccccchHHHHH
Confidence 444443 343 99999999999999999999999999 999999888754 23577777655433333334455
Q ss_pred HHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHH
Q psy14342 262 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 301 (316)
Q Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~ 301 (316)
++..+.+.......+..++..+.+|+|++||++|++|.+.
T Consensus 4186 l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4186 IKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred HHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 5555554333322334455556999999999999999764
No 96
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=6.4e-35 Score=270.27 Aligned_cols=280 Identities=15% Similarity=0.115 Sum_probs=208.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.++|+++...+......++++++|+++..+|++|..++.. ++.++..|+++++.++.
T Consensus 112 ~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~~~---- 186 (436)
T TIGR01923 112 QIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSI-LFRWLIEGATLRIVDKF---- 186 (436)
T ss_pred ceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHH-HHHHHhcCceEEecchH----
Confidence 5789999999999999999999999998888888899999999999999999988865 88999999999987543
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc----------------cccccccchhccCCCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC----------------ELYPSRHIALCLDPYCGLG 144 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~----------------e~~~~yG~te~~~~~~~~~ 144 (316)
..+++.+++++++++..+|+++..+........ ..+.+..++ .+++.||+||++.......
T Consensus 187 --~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~-~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 263 (436)
T TIGR01923 187 --NQLLEMIANERVTHISLVPTQLNRLLDEGGHNE-NLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTAT 263 (436)
T ss_pred --HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCCC-ceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcC
Confidence 278899999999999999988776554332211 111111111 3888999999975433222
Q ss_pred ceEEEEeeeccCcccccCCCce-EE-ec-----CceEEecC---CCcccCCCcC----------CCCceeeec-Cc---C
Q psy14342 145 FALWVLSSVYSGHHSILIPPSE-VE-VN-----PALWLSAV---SQYRVRDTFC----------SCNGALYQG-AE---R 200 (316)
Q Consensus 145 ~~~~~~~~~~~g~~~~~~~g~~-~i-~d-----~~l~v~~~---~gY~~~~~~~----------~~d~g~~~~-g~---~ 200 (316)
.. ........+.++++++ ++ .+ ++|+++++ .|||+++..+ ++|.|++++ |. .
T Consensus 264 ~~----~~~~~~~~G~~~~~~~~~i~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~ 339 (436)
T TIGR01923 264 PE----MLHARPDVGRPLAGREIKIKVDNKEGHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVL 339 (436)
T ss_pred cc----ccccccCCCccCCCcEEEEEeCCCCCceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEe
Confidence 11 0000012344789998 66 44 34999999 8999975443 235555544 33 9
Q ss_pred CcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHHHHHHHhcCeeec
Q psy14342 201 LALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVG 275 (316)
Q Consensus 201 GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~~ 275 (316)
||.||+||++|++|+|.|||++|.+ +|.|.++++++.. +.+.+++...+. .+..++.+++++.+. .+..| .
T Consensus 340 GR~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~-~~~~~l~~~l~~~l~-~~~~p-~ 415 (436)
T TIGR01923 340 GRRDDLIISGGENIYPEEIETVLYQ-HPGIQEAVVVPKPDAEWGQVPVAYIVSESD-ISQAKLIAYLTEKLA-KYKVP-I 415 (436)
T ss_pred ccccCeEEeCCEeeCHHHHHHHHHh-CCCeeEEEEeCCcchhcCCeeEEEEEECCC-CCHHHHHHHHHHhhh-CCCCC-e
Confidence 9999999999999999999999999 9999999999873 245555555432 344577888887776 55555 3
Q ss_pred EEEEEcCCCcccCCCchhhHHHH
Q psy14342 276 VAVVVDPGVVPINSRGEKQRMHL 298 (316)
Q Consensus 276 ~~~~~~~~~lP~t~~gKi~r~~l 298 (316)
.+.+++ +||+|++||++|++|
T Consensus 416 ~i~~~~--~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 416 AFEKLD--ELPYNASGKILRNQL 436 (436)
T ss_pred EEEEec--CCCCCCCCceecccC
Confidence 455554 899999999999864
No 97
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-34 Score=276.82 Aligned_cols=292 Identities=14% Similarity=0.110 Sum_probs=208.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHH-HHHhcCCC-CCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM-KLACELYP-SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~-~~~~~~~~-~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
|+++++|||||||.||+|.++|+++..++... ...++... +++++.++|++|.+|+...++.++..|+++++.++.
T Consensus 207 ~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~-- 284 (563)
T PRK06710 207 DLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKF-- 284 (563)
T ss_pred CEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCC--
Confidence 47899999999999999999999987654332 23344443 457788899999999877677889999999987543
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhh--h-hhcccccccc-----------------cccccccchhccC
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV--T-SLCRSMKLAC-----------------ELYPSRHIALCLD 138 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~--~-~~~~~~~ls~-----------------e~~~~yG~te~~~ 138 (316)
++..+++.+++++++++..+|+.+..+....... . ...+.+-..+ .+++.||+||++.
T Consensus 285 --~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 362 (563)
T PRK06710 285 --DMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSP 362 (563)
T ss_pred --CHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCcc
Confidence 5788999999999999999999876554321110 0 0011111111 2788999999875
Q ss_pred CCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcC----------CCCc
Q psy14342 139 PYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFC----------SCNG 192 (316)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~----------~~d~ 192 (316)
........ .....++.+.+++|.. +++|++ |+++|+ .||+++++.+ ++|.
T Consensus 363 ~~~~~~~~----~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~ 438 (563)
T PRK06710 363 VTHSNFLW----EKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDV 438 (563)
T ss_pred ccccCccc----ccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccce
Confidence 32211100 1111234455788988 777632 999999 8999987654 2355
Q ss_pred eeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchHHHH
Q psy14342 193 ALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLVPLV 262 (316)
Q Consensus 193 g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~ 262 (316)
|++++ |. .||.||+|+++|++|+|.|||++|.+ ||.|.+++|++.. +.+++++...+.. .+.+++.+.+
T Consensus 439 ~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~ 517 (563)
T PRK06710 439 GYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYE-HEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECSEEELNQFA 517 (563)
T ss_pred EEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHh-CcceeeEEEEccccCCcCceeEEEEEECCCCCCCHHHHHHHH
Confidence 65543 33 89999999999999999999999999 9999999999873 4566666655432 2335666666
Q ss_pred HHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcC
Q psy14342 263 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLAD 305 (316)
Q Consensus 263 ~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~ 305 (316)
++.+. .+..| ..+.+++ ++|+|++||++|++|++.+...
T Consensus 518 ~~~l~-~~~~P-~~~~~v~--~iP~t~~GKi~r~~L~~~~~~~ 556 (563)
T PRK06710 518 RKYLA-AYKVP-KVYEFRD--ELPKTTVGKILRRVLIEEEKRK 556 (563)
T ss_pred HHhcc-cccCC-cEEEEcc--cCCCCccchhhHHHHHHHHhhc
Confidence 66666 44454 3455554 8999999999999999988763
No 98
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1e-34 Score=277.30 Aligned_cols=289 Identities=16% Similarity=0.137 Sum_probs=205.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc----CCCC-CceEEecCCcCChhhhHHHHhhhhcCceeeeeCC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE----LYPS-RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 75 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~----~~~~-d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~ 75 (316)
++++++|||||||.||+|.++|.++..++......++ +.++ +.++.++|++|.+++....+.++..|++.++...
T Consensus 209 ~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 288 (560)
T PRK08751 209 DIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISN 288 (560)
T ss_pred cEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecC
Confidence 4789999999999999999999999887776655554 3333 5667889999999987666677777877766543
Q ss_pred cccccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchh
Q psy14342 76 SEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIAL 135 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te 135 (316)
. .++..+++.++++++|+++.+|..+..+........ ...+.+-.++ ++++.||+||
T Consensus 289 ~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE 365 (560)
T PRK08751 289 P---RDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTE 365 (560)
T ss_pred c---CCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeecccc
Confidence 2 257889999999999999888888765544321100 0011111111 3888999999
Q ss_pred ccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC-----------
Q psy14342 136 CLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS----------- 189 (316)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~----------- 189 (316)
++......... .....++.+.+++|.. ++.|++ |+++|+ .|||++++.+.
T Consensus 366 ~~~~~~~~~~~----~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~T 441 (560)
T PRK08751 366 TSPAACINPLT----LKEYNGSIGLPIPSTDACIKDDAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHT 441 (560)
T ss_pred CCCceeccccc----ccccCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccc
Confidence 87543221110 0112234556788988 777643 899999 89999876543
Q ss_pred CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHH
Q psy14342 190 CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVP 260 (316)
Q Consensus 190 ~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~ 260 (316)
+|.|++++ |. .||.||+|+++|++|+|.|||++|.+ ||.|.+++|++.. +.+.+++.......+.+++.+
T Consensus 442 GD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~-~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~~~~~~~l~~ 520 (560)
T PRK08751 442 GDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAM-MPGVLEVAAVGVPDEKSGEIVKVVIVKKDPALTAEDVKA 520 (560)
T ss_pred cceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHh-CcCeeeeEEEecCCCCCCceEEEEEEcCCCCCCHHHHHH
Confidence 25555543 33 89999999999999999999999999 9999999999873 345555544433334457778
Q ss_pred HHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHH
Q psy14342 261 LVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 301 (316)
Q Consensus 261 ~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~ 301 (316)
.+++.+. .+..| ..+.+++ +||+|++||++|++|++.
T Consensus 521 ~~~~~l~-~~~~P-~~v~~v~--~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 521 HARANLT-GYKQP-RIIEFRK--ELPKTNVGKILRRELRDA 557 (560)
T ss_pred HHHHhhh-hccCC-eEEEEhh--hCCCCccccccHHHHHHh
Confidence 8887776 45454 3555555 899999999999999876
No 99
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-35 Score=275.17 Aligned_cols=283 Identities=16% Similarity=0.077 Sum_probs=195.8
Q ss_pred eEEEEeccCCCCCceEEEEe--HHHHHHHH----HHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCC
Q psy14342 2 LAYLDFSVSTTGMLAGIKMS--HAAVTSLC----RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 75 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t--~~~l~~~~----~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~ 75 (316)
+++|+|||||||.||+|+++ |.++.... ......+++..+|+++.++|++|.+++.. .+..+..|+++++.+.
T Consensus 150 ~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~ 228 (501)
T PRK13390 150 GAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAKR 228 (501)
T ss_pred cEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcCC
Confidence 58999999999999999964 55544321 11234577888999999999999988865 3445678999988653
Q ss_pred cccccChHHHHHHHhccceeeEEecccchhhHHhhHHhh-h----hhcccccccc-----------------cccccccc
Q psy14342 76 SEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-T----SLCRSMKLAC-----------------ELYPSRHI 133 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-~----~~~~~~~ls~-----------------e~~~~yG~ 133 (316)
. ++..+++.+++++++++..+|+++..+....... . ...+.+-..+ .+++.||+
T Consensus 229 ~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~ 304 (501)
T PRK13390 229 F----DAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSS 304 (501)
T ss_pred c----CHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecc
Confidence 2 5889999999999999999999886654322110 0 0011111111 27788999
Q ss_pred hhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC---------
Q psy14342 134 ALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS--------- 189 (316)
Q Consensus 134 te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~--------- 189 (316)
||++.......+. .....++.+.+++| . .++|++ |+++|+ .|||++++.+.
T Consensus 305 tE~~~~~~~~~~~----~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~ 379 (501)
T PRK13390 305 TEAHGMTFIDSPD----WLAHPGSVGRSVLG-DLHICDDDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPF 379 (501)
T ss_pred cccCceEEecchh----hccCCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCc
Confidence 9986422111110 01122344557888 5 666643 899998 89999876542
Q ss_pred ----CCceeeecCc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchh--
Q psy14342 190 ----CNGALYQGAE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESE-- 254 (316)
Q Consensus 190 ----~d~g~~~~g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~-- 254 (316)
+|.|++++++ .||.||+||++|++|+|.|||++|.. ||.|.+++|++.. +++++++.+......
T Consensus 380 w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~-~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~ 458 (501)
T PRK13390 380 WTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTM-HPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSD 458 (501)
T ss_pred eEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHh-CCCeeEEEEEeccCcccCceeEEEEEecCCCCcch
Confidence 3555554433 99999999999999999999999998 9999999999983 456666665543211
Q ss_pred --hcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHH
Q psy14342 255 --ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 299 (316)
Q Consensus 255 --~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~ 299 (316)
.+++.+.++..+. .+..| ..+.+++ ++|+|++||++|++|+
T Consensus 459 ~~~~~l~~~~~~~l~-~~~~P-~~~~~~~--~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 459 ELARELIDYTRSRIA-HYKAP-RSVEFVD--ELPRTPTGKLVKGLLR 501 (501)
T ss_pred hhHHHHHHHHHHhcc-cCCCC-cEEEEec--cCCCCCccceehhhcC
Confidence 2356666666655 34444 3555555 8999999999999874
No 100
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-34 Score=271.69 Aligned_cols=296 Identities=16% Similarity=0.119 Sum_probs=220.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.+||+++..........+++.++|+++..+|++|.+++.. .+.++..|+++++.+..
T Consensus 168 ~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~~G~~~v~~~~~---- 242 (521)
T PRK06187 168 DAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGL-PYLALMAGAKQVIPRRF---- 242 (521)
T ss_pred ceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHH-HHHHHHhCCEEEecCCC----
Confidence 5799999999999999999999999988888888899999999999999999998887 45599999999987653
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~~~ 140 (316)
++..+++.++++++++++.+|+.+..+........ ...+.+-.++ .+++.||+||++...
T Consensus 243 ~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~ 322 (521)
T PRK06187 243 DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVV 322 (521)
T ss_pred CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCccc
Confidence 78899999999999999999998876654332210 0011111111 378899999987544
Q ss_pred CCCCc-eEEEEeeeccCcccccCCCce-EEecCc-------------eEEecC---CCcccCCCcC----------CCCc
Q psy14342 141 CGLGF-ALWVLSSVYSGHHSILIPPSE-VEVNPA-------------LWLSAV---SQYRVRDTFC----------SCNG 192 (316)
Q Consensus 141 ~~~~~-~~~~~~~~~~g~~~~~~~g~~-~i~d~~-------------l~v~~~---~gY~~~~~~~----------~~d~ 192 (316)
..... ..........++.+.+++|.. +++|++ |+++++ .||+++++.+ ++|.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~ 402 (521)
T PRK06187 323 SVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDV 402 (521)
T ss_pred ccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccce
Confidence 33322 100000112334555789988 777642 899998 8898875433 3366
Q ss_pred eeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee-----CCcEEEEEEecCCc-hhhcchHHHH
Q psy14342 193 ALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE-SEALDLVPLV 262 (316)
Q Consensus 193 g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~-----~~~~~~~v~~~~~~-~~~~~l~~~~ 262 (316)
|++++ |. .||.||+|+++|.+|+|.+||+.|.+ +++|.+++|++. ++.++++++..+.. .+..++.+++
T Consensus 403 ~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l 481 (521)
T PRK06187 403 GYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYG-HPAVAEVAVIGVPDEKWGERPVAVVVLKPGATLDAKELRAFL 481 (521)
T ss_pred EEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHh-CCCceEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHHHH
Confidence 66644 43 89999999999999999999999999 999999999986 34677777766543 3345677777
Q ss_pred HHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCC
Q psy14342 263 TNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 306 (316)
Q Consensus 263 ~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~ 306 (316)
++.+. .+..| ..+.++ +++|+|++||++|++|++.|.+++
T Consensus 482 ~~~l~-~~~~p-~~i~~v--~~~P~t~~gK~~r~~l~~~~~~~~ 521 (521)
T PRK06187 482 RGRLA-KFKLP-KRIAFV--DELPRTSVGKILKRVLREQYAEGK 521 (521)
T ss_pred HHhcc-CCCCc-eEEEEc--cCCCCCCCCCeeHHHHHHHHhcCC
Confidence 76665 34343 344444 489999999999999999998763
No 101
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-34 Score=272.32 Aligned_cols=298 Identities=15% Similarity=0.077 Sum_probs=208.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHH-H-HHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVT-S-LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~-~-~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
++++|+|||||||.||+|.+||+++. . ........++++++|+++.++|++|.+++.. .+.++..|+++++....
T Consensus 178 ~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~-~~~~~~~g~~~v~~~~~-- 254 (542)
T PRK06018 178 TAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGI-AFSAPSMGTKLVMPGAK-- 254 (542)
T ss_pred ceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHH-HHhhhhcCceEEccCcC--
Confidence 47899999999999999999999643 2 2233445677889999999999999988876 56788999998875422
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc----------------cccccccchhccCC
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC----------------ELYPSRHIALCLDP 139 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~----------------e~~~~yG~te~~~~ 139 (316)
.++..+++.++++++++++.+|+++..+........ ...+.+-..+ .+++.||+||++..
T Consensus 255 -~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~ 333 (542)
T PRK06018 255 -LDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFEDMGVEVRHAWGMTEMSPL 333 (542)
T ss_pred -CCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHhCCCeEeeecccccCcc
Confidence 257889999999999999999998765543222110 0011111111 27889999998754
Q ss_pred CCCCC--ceEEE----EeeeccCcccccCCCce-EEecCc-------------eEEecC---CCcccCCCcC--------
Q psy14342 140 YCGLG--FALWV----LSSVYSGHHSILIPPSE-VEVNPA-------------LWLSAV---SQYRVRDTFC-------- 188 (316)
Q Consensus 140 ~~~~~--~~~~~----~~~~~~g~~~~~~~g~~-~i~d~~-------------l~v~~~---~gY~~~~~~~-------- 188 (316)
..... +.... ......++.+.+.+|++ ++.|++ |+++|+ .|||++....
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~ 413 (542)
T PRK06018 334 GTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWDGKTFGRLKVRGPAVAAAYYRVDGEILDDDGFFD 413 (542)
T ss_pred cccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCCCCceeEEEEecCCcchhhhcCcccEecCCcEEE
Confidence 32211 00000 00001123345788888 776642 789998 8999853321
Q ss_pred CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEee-----CCcEEEEEEecCCc-hhhcch
Q psy14342 189 SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW-----TNLLVVVVELDGNE-SEALDL 258 (316)
Q Consensus 189 ~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~-----~~~~~~~v~~~~~~-~~~~~l 258 (316)
++|.|++++ |. .||.||+|+.+|++|+|.|||+.|.+ ||.|.+|+|++. +++..+++.+.+.. .+.+++
T Consensus 414 TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 492 (542)
T PRK06018 414 TGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVG-HPKVAEAAVIGVYHPKWDERPLLIVQLKPGETATREEI 492 (542)
T ss_pred cCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHh-CCcceeEEEEeccCCCcCceeEEEEEeCCCCCCCHHHH
Confidence 225555543 32 89999999999999999999999999 999999999987 34566666665543 234567
Q ss_pred HHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCC
Q psy14342 259 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQL 307 (316)
Q Consensus 259 ~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~ 307 (316)
.+.+++.+. .+..| ..+.+++ +||+|++||++|++|++.|.+-.+
T Consensus 493 ~~~~~~~l~-~~~~P-~~i~~v~--~iP~t~~GKi~r~~L~~~~~~~~~ 537 (542)
T PRK06018 493 LKYMDGKIA-KWWMP-DDVAFVD--AIPHTATGKILKTALREQFKDYKL 537 (542)
T ss_pred HHHHHhhCc-cccCC-cEEEEec--cCCCCCcchhhHHHHHHHHhccCC
Confidence 777777766 44444 4566655 899999999999999999987433
No 102
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-34 Score=275.18 Aligned_cols=289 Identities=15% Similarity=0.161 Sum_probs=204.7
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc----CC---CCCceEEecCCcCChhhhHHHHhhhhcCceeeee
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE----LY---PSRHIALCLDPYCGLGFALWVLSSVYSGHHSILI 73 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~----~~---~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~ 73 (316)
++++|+|||||||.||+|.++|+++..++......+. .. ..+.++.++|++|.+++....+.++..|++.++.
T Consensus 205 ~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~ 284 (557)
T PRK07059 205 DVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILI 284 (557)
T ss_pred ceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEe
Confidence 5799999999999999999999999877654443322 11 2345677899999998877678888889887776
Q ss_pred CCcccccChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hccccccc-----------------ccccccccc
Q psy14342 74 PPSEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLA-----------------CELYPSRHI 133 (316)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls-----------------~e~~~~yG~ 133 (316)
+.. .++..+++.+++++++.+..+|.++..+......... ..+.+... ..+++.||+
T Consensus 285 ~~~---~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~ 361 (557)
T PRK07059 285 PNP---RDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGL 361 (557)
T ss_pred cCC---cCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEeccccCCHHHHHHHHHHhCCCeeecccc
Confidence 532 2677899999999999988888877655443221000 00100001 138889999
Q ss_pred hhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC---------
Q psy14342 134 ALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS--------- 189 (316)
Q Consensus 134 te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~--------- 189 (316)
||++......... .....++.|.+++|.+ +++|++ |+++|+ .|||++++.+.
T Consensus 362 tE~~~~~~~~~~~----~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~ 437 (557)
T PRK07059 362 SETSPVATCNPVD----ATEFSGTIGLPLPSTEVSIRDDDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFF 437 (557)
T ss_pred ccccchhhcCCCC----CCCcCCcccCccCCcEEEEECCCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCce
Confidence 9987643322210 0011234556899998 777753 999999 89999875542
Q ss_pred --CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcch
Q psy14342 190 --CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDL 258 (316)
Q Consensus 190 --~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l 258 (316)
+|.|++++ |. .||.||+|+++|++|+|.|||++|.+ ||+|.+++|++.. +.+++++.......+.+++
T Consensus 438 ~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~-~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~~~~~~l 516 (557)
T PRK07059 438 RTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVAS-HPGVLEVAAVGVPDEHSGEAVKLFVVKKDPALTEEDV 516 (557)
T ss_pred ecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHh-CCceeEEEEEecccCCCCeeEEEEEEeCCCCCCHHHH
Confidence 25555543 32 99999999999999999999999999 9999999999873 4566666655433344567
Q ss_pred HHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHH
Q psy14342 259 VPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 301 (316)
Q Consensus 259 ~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~ 301 (316)
.+.+++.+. .+..| ..+.+++ ++|+|++||++|+.|++.
T Consensus 517 ~~~~~~~l~-~~~~P-~~i~~v~--~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 517 KAFCKERLT-NYKRP-KFVEFRT--ELPKTNVGKILRRELRDG 555 (557)
T ss_pred HHHHHHhcc-cccCC-cEEEEec--cCCCCcccceeHHHHHhh
Confidence 777777766 44444 4566655 899999999999998753
No 103
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.1e-34 Score=272.00 Aligned_cols=287 Identities=15% Similarity=0.136 Sum_probs=206.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHH-HHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRS-MKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~-~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+++++|||||||.||+|.++|+++...+.. ....++++++|+++..+|++|.+++...++.++..|+++++.++.
T Consensus 162 ~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~--- 238 (508)
T TIGR02262 162 DPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGER--- 238 (508)
T ss_pred CcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCC---
Confidence 5789999999999999999999999877665 456678899999999999999999977788899999999887643
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccchhccCC
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIALCLDP 139 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~te~~~~ 139 (316)
.++..+++.+++++++.++.+|.++..+........ ...+.+-.++ ++++.||.||++..
T Consensus 239 ~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~ 318 (508)
T TIGR02262 239 PTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHI 318 (508)
T ss_pred CCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCce
Confidence 267899999999999999999987654432211100 0011111111 38889999998743
Q ss_pred CCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC----------CCCcee
Q psy14342 140 YCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC----------SCNGAL 194 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~----------~~d~g~ 194 (316)
...... .....+..|.+++|++ +++|++ |+++|+ .||+++++.+ ++|.|+
T Consensus 319 ~~~~~~-----~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~ 393 (508)
T TIGR02262 319 FLSNLP-----GDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYV 393 (508)
T ss_pred eecCCc-----cCCCCCCcCCCCCCcEEEEECCCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEE
Confidence 221111 1112234445789998 787642 899998 8999987654 335666
Q ss_pred eec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchh----hcchHHH
Q psy14342 195 YQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESE----ALDLVPL 261 (316)
Q Consensus 195 ~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~----~~~l~~~ 261 (316)
+++ |. .||.||+|+++|++|+|.+||++|.+ ||+|.++++++.. +++.+++++.+.... .+++.+.
T Consensus 394 ~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~ 472 (508)
T TIGR02262 394 RNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQ-HPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEH 472 (508)
T ss_pred EcCCccEEEeccccceeeeCCEEECHHHHHHHHHh-CCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHHH
Confidence 643 43 89999999999999999999999999 9999999999863 355666665543322 2344445
Q ss_pred HHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHH
Q psy14342 262 VTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 300 (316)
Q Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~ 300 (316)
+++.+. .+..+ ..+.++ +++|+|++||++|++|++
T Consensus 473 ~~~~l~-~~~~p-~~i~~~--~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 473 VKDRLA-PYKYP-RWIVFV--DDLPKTATGKIQRFKLRE 507 (508)
T ss_pred HHHhcc-cCCCC-ceEEEe--cCCCCCCCCcEehhhccC
Confidence 554444 23333 344444 489999999999998864
No 104
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.2e-35 Score=284.12 Aligned_cols=297 Identities=11% Similarity=0.055 Sum_probs=197.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHh----c-CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC----E-LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 75 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~----~-~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~ 75 (316)
|+++|+|||||||.||||++||+++.+.+.+....+ + +.++|++++++|++|++++.. ....+..|+++.+.+
T Consensus 265 d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~~- 342 (700)
T PTZ00216 265 DLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFGS- 342 (700)
T ss_pred cEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEECC-
Confidence 589999999999999999999999998877766544 2 367899999999999998865 455577787666532
Q ss_pred cccccChHHHHH-------HHhccceeeEEecccchhhHHhhHHh-hh--------------------------------
Q psy14342 76 SEVEVNPALWLS-------AVSQYRVRDTFCSYGMLAGIKMSHAA-VT-------------------------------- 115 (316)
Q Consensus 76 ~~~~~~~~~~~~-------~~~~~~~t~~~~~~~~~~~l~~~~~~-~~-------------------------------- 115 (316)
+..+.+ .++++++|++..+|..+..+...... ..
T Consensus 343 ------~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 416 (700)
T PTZ00216 343 ------PRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNE 416 (700)
T ss_pred ------HHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHH
Confidence 333333 67889999999999887654321100 00
Q ss_pred -------hhc-cccc--ccc-----------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-E
Q psy14342 116 -------SLC-RSMK--LAC-----------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-V 167 (316)
Q Consensus 116 -------~~~-~~~~--ls~-----------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~ 167 (316)
... ..++ +++ .+++.||+||++.......+ .....++.|.|+||++ +
T Consensus 417 ~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~~l~~~YG~TEt~~~~~~~~~-----~~~~~~svG~p~~g~evk 491 (700)
T PTZ00216 417 KVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFGMVIQGWGLTETVCCGGIQRT-----GDLEPNAVGQLLKGVEMK 491 (700)
T ss_pred HHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhhhHhhccCcccccccccccCC-----CCCCCCCcCCcCCCeEEE
Confidence 000 0111 111 26789999999654332221 1122345566899999 8
Q ss_pred EecC-------------ceEEecC---CCcccCCCcCCC-----------Cceeeec-Cc---CCcccceeE-ECCcccC
Q psy14342 168 EVNP-------------ALWLSAV---SQYRVRDTFCSC-----------NGALYQG-AE---RLALDETIM-LRGMRYH 215 (316)
Q Consensus 168 i~d~-------------~l~v~~~---~gY~~~~~~~~~-----------d~g~~~~-g~---~GR~dd~i~-~~G~~v~ 215 (316)
++|+ +|+++|+ .|||++++.++. |.|++++ |. +||.||+|| .+|++|+
T Consensus 492 I~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~ 571 (700)
T PTZ00216 492 LLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIA 571 (700)
T ss_pred EeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceec
Confidence 8762 2999999 999999887643 4555543 33 999999998 7999999
Q ss_pred hHhHHHHHHHhccccce--eEEEeeC--CcEEEEEEecCCch-----------------hhcchHHHHHHHHHH---hcC
Q psy14342 216 PIDIENSVMRAHKKIAE--CAVFTWT--NLLVVVVELDGNES-----------------EALDLVPLVTNAVLE---EHH 271 (316)
Q Consensus 216 p~eIE~~l~~~~p~v~~--~~v~~~~--~~~~~~v~~~~~~~-----------------~~~~l~~~~~~~l~~---~~~ 271 (316)
|.|||++|.+ ||.|.+ ++|+... ..+++++.+..... ...++.+.+.+.+.+ ..+
T Consensus 572 p~eIE~~l~~-~p~V~~~~~~v~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 650 (700)
T PTZ00216 572 LEALEALYGQ-NELVVPNGVCVLVHPARSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAG 650 (700)
T ss_pred cHHHHHHHhc-CcCcccceEEEEEecCCceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcC
Confidence 9999999999 999986 3344333 24566665542100 011233333333221 111
Q ss_pred e----eecEEEEEcCC----CcccCCCchhhHHHHHHHHHcCCCCcchh
Q psy14342 272 L----IVGVAVVVDPG----VVPINSRGEKQRMHLRDGFLADQLDPIYV 312 (316)
Q Consensus 272 ~----~~~~~~~~~~~----~lP~t~~gKi~r~~l~~~~~~~~~~~~~~ 312 (316)
+ .+..+.++... .-.+|+++|++|+++.+.|.+ .++.+|.
T Consensus 651 l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~-~i~~ly~ 698 (700)
T PTZ00216 651 RKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERYAD-LIKELFA 698 (700)
T ss_pred CCCceeEeEEEEECCCCCCCCCCCChhhccchHHHHHHHHH-HHHHHhc
Confidence 1 13345555422 223699999999999999997 8888885
No 105
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-33 Score=266.36 Aligned_cols=290 Identities=16% Similarity=0.144 Sum_probs=209.2
Q ss_pred CeEEEEeccCCCCCceEEEEeHHH---HHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAA---VTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE 77 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~---l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~ 77 (316)
|+++++|||||||.||+|.++|.. +..........+++.++|+++.++|++|..+..+ .+.++..|+++++.++.
T Consensus 153 ~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~- 230 (509)
T PRK12406 153 QPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGVLVLQPRF- 230 (509)
T ss_pred CceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHH-HHHHHhhheEEEEccCC-
Confidence 578999999999999999997654 3444445566788899999999999999988777 45678889998887532
Q ss_pred cccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhcccccccc-----------------cccccccchh
Q psy14342 78 VEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLAC-----------------ELYPSRHIAL 135 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~-----------------e~~~~yG~te 135 (316)
+|..+++.++++++++++.+|+++..+........ ...+.+-..+ .+++.||+||
T Consensus 231 ---~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 307 (509)
T PRK12406 231 ---DPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTE 307 (509)
T ss_pred ---CHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccc
Confidence 68899999999999999999998876543322110 0001111111 2778999999
Q ss_pred ccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC----CCcccCCCcCCC---------
Q psy14342 136 CLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV----SQYRVRDTFCSC--------- 190 (316)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~----~gY~~~~~~~~~--------- 190 (316)
++......... .....++.|.+++|.+ +++|++ |+++++ .||++++..+..
T Consensus 308 ~~~~~~~~~~~----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~T 383 (509)
T PRK12406 308 SGAVTFATSED----ALSHPGTVGKAAPGAELRFVDEDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITS 383 (509)
T ss_pred cCceEecCccc----ccccCCCcCccCCCcEEEEECCCCCCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEE
Confidence 87532211100 0112234456889998 887753 889987 489988765422
Q ss_pred -Cceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhcchH
Q psy14342 191 -NGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEALDLV 259 (316)
Q Consensus 191 -d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~~l~ 259 (316)
|.|++++ |. .||.||+||++|.+|+|.|||++|.+ +|.|.++++++.. +.++++++..+.. .+.+++.
T Consensus 384 GD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 462 (509)
T PRK12406 384 GDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHA-VPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIR 462 (509)
T ss_pred ccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHh-CCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHH
Confidence 5555543 33 89999999999999999999999999 9999999999883 3466767665432 2345677
Q ss_pred HHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 260 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 260 ~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+.+++.+. .+..| ..+.++ +++|+|++||++|++|++.|.+
T Consensus 463 ~~l~~~l~-~~~~P-~~i~~~--~~iP~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 463 AQLKARLA-GYKVP-KHIEIM--AELPREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred HHHHHhcc-cCCCC-cEEEEe--ccCCCCCccchhHHHHHHHHHh
Confidence 77777766 44443 345554 4899999999999999998775
No 106
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.3e-34 Score=268.39 Aligned_cols=291 Identities=15% Similarity=0.097 Sum_probs=200.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHH------HHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLC------RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 74 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~------~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 74 (316)
++++++|||||||.||+|.++|.++.... ......+....+++++.++|++|..++.. .+.++..|+++++.+
T Consensus 141 ~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~ 219 (502)
T PRK08276 141 AGADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVME 219 (502)
T ss_pred cceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcC
Confidence 35899999999999999999987654321 11111222346788899999999988877 567899999998875
Q ss_pred CcccccChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh-----hcccccccc-----------------ccccccc
Q psy14342 75 PSEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS-----LCRSMKLAC-----------------ELYPSRH 132 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~-----~~~~~~ls~-----------------e~~~~yG 132 (316)
. .+|..+++.++++++++++.+|+++..+......... ..+.+-..+ .+++.||
T Consensus 220 ~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG 295 (502)
T PRK08276 220 K----FDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYA 295 (502)
T ss_pred C----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcc
Confidence 3 2688999999999999999999987765543321110 001111111 1678899
Q ss_pred chhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC--------
Q psy14342 133 IALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS-------- 189 (316)
Q Consensus 133 ~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~-------- 189 (316)
+||++......... .....++.|.++ +.. ++.|++ |+++|+ .|||++++.+.
T Consensus 296 ~tE~~~~~~~~~~~----~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 370 (502)
T PRK08276 296 SSEGGGVTVITSED----WLAHPGSVGKAV-LGEVRILDEDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGW 370 (502)
T ss_pred cccccceeEecCcc----ccccCCCcceec-ccEEEEECCCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCc
Confidence 99987522111100 011223444567 556 776653 899988 89999876542
Q ss_pred ---CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhc-
Q psy14342 190 ---CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEAL- 256 (316)
Q Consensus 190 ---~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~- 256 (316)
+|.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+|++++.. +.++++++..+.....+
T Consensus 371 ~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 449 (502)
T PRK08276 371 VTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVT-HPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDA 449 (502)
T ss_pred eeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHh-CCCcceEEEEeCCCcccCceEEEEEEECCCCCCChh
Confidence 25555543 33 99999999999999999999999999 9999999999883 46777777765433233
Q ss_pred ---chHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCC
Q psy14342 257 ---DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 306 (316)
Q Consensus 257 ---~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~ 306 (316)
++.+.++..+. .+..| ..+.++ +++|+|++||++|++|++.|..+.
T Consensus 450 ~~~~i~~~~~~~l~-~~~~p-~~i~~~--~~lP~t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 450 LAAELIAWLRGRLA-HYKCP-RSIDFE--DELPRTPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred hHHHHHHHHHhhcc-CCCCC-cEEEEe--cCCCCCcccchhHHHHHHHHHhhh
Confidence 34455555444 23333 344444 589999999999999999987754
No 107
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-33 Score=270.29 Aligned_cols=292 Identities=17% Similarity=0.184 Sum_probs=207.4
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc---CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE---LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE 77 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~---~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~ 77 (316)
|+++|+|||||||.||+|.++|+++..+.......+. ...++.++.++|++|.+++....+..+..|+++++..+.
T Consensus 207 ~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~- 285 (560)
T PRK08974 207 DLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNP- 285 (560)
T ss_pred CeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCc-
Confidence 5799999999999999999999999887655444443 234567888999999999877677888889987775432
Q ss_pred cccChHHHHHHHhccceeeEEecccchhhHHhhHHhhhh---hcccccccc-----------------cccccccchhcc
Q psy14342 78 VEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTS---LCRSMKLAC-----------------ELYPSRHIALCL 137 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~---~~~~~~ls~-----------------e~~~~yG~te~~ 137 (316)
.++..+++.+++++++.+..+|+.+..+......... ..+.+-.++ .+++.||+||++
T Consensus 286 --~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~ 363 (560)
T PRK08974 286 --RDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECS 363 (560)
T ss_pred --cCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccC
Confidence 2577889999999999998888887655432211000 001010111 388899999987
Q ss_pred CCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcC----------CCCc
Q psy14342 138 DPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFC----------SCNG 192 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~----------~~d~ 192 (316)
......... .....++.+.++||.+ ++.|++ |+++|+ .||++++..+ ++|.
T Consensus 364 ~~~~~~~~~----~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl 439 (560)
T PRK08974 364 PLVSVNPYD----LDYYSGSIGLPVPSTEIKLVDDDGNEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDI 439 (560)
T ss_pred ceeeccCCC----CcccCCccccCcCCCEEEEECCCCCCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCE
Confidence 543322211 0011234556899999 887753 899999 8999986553 3366
Q ss_pred eeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeCC-----cEEEEEEecCCchhhcchHHHHH
Q psy14342 193 ALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWTN-----LLVVVVELDGNESEALDLVPLVT 263 (316)
Q Consensus 193 g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~ 263 (316)
|++++ |. +||.||+|+++|++|+|.+||++|.+ ||.|.+++|++..+ .++++++..+...+.+++.+.++
T Consensus 440 ~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~l~~~l~ 518 (560)
T PRK08974 440 AVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVML-HPKVLEVAAVGVPSEVSGEAVKIFVVKKDPSLTEEELITHCR 518 (560)
T ss_pred EEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHh-CCCeeEEEEEeeecCCcceEEEEEEECCCCCCCHHHHHHHHH
Confidence 66644 43 89999999999999999999999999 99999999998843 34554443333333356666666
Q ss_pred HHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 264 NAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 264 ~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+.+. .+..| ..+.++ +++|+|++||++|++|+++..+
T Consensus 519 ~~l~-~~~~P-~~~~~~--~~lP~t~~GK~~r~~l~~~~~~ 555 (560)
T PRK08974 519 RHLT-GYKVP-KLVEFR--DELPKSNVGKILRRELRDEARA 555 (560)
T ss_pred hhcc-cccCC-cEEEEh--hhCCCCCCCcEeHHHHHHHHHh
Confidence 6665 44444 344554 4899999999999999998876
No 108
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-33 Score=264.90 Aligned_cols=284 Identities=15% Similarity=0.111 Sum_probs=203.9
Q ss_pred eEEEEeccCCCCCceEEEEeHHHHH--HHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 2 LAYLDFSVSTTGMLAGIKMSHAAVT--SLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t~~~l~--~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
+++|+|||||||.||+|.++|.... .........+++.++|+++.++|++|.+|+.. ++.++..|+++++....
T Consensus 176 ~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~-~~~~l~~G~~~~~~~~~--- 251 (516)
T PRK13383 176 GRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGM-LMLTIALGGTVLTHRHF--- 251 (516)
T ss_pred CcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHH-HHHHHhcCCEEEECCCC---
Confidence 5689999999999999999997321 22222334567888999999999999999976 78889999999876432
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhcccccccc-----------------cccccccchhcc
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLAC-----------------ELYPSRHIALCL 137 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~-----------------e~~~~yG~te~~ 137 (316)
++..+++.+++++++.++.+|+++..+........ ...+.+-.++ .+++.||+||++
T Consensus 252 -~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~ 330 (516)
T PRK13383 252 -DAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVG 330 (516)
T ss_pred -CHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccc
Confidence 57889999999999999999998876543322100 0011111111 288899999997
Q ss_pred CCCCCCCceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCc-------CCCCceee
Q psy14342 138 DPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTF-------CSCNGALY 195 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~-------~~~d~g~~ 195 (316)
......... .....+..|.++||.+ +++|++ |+++|+ .||++++.. .++|.|++
T Consensus 331 ~~~~~~~~~----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~ 406 (516)
T PRK13383 331 IGALATPAD----LRDAPETVGKPVAGCPVRILDRNNRPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYL 406 (516)
T ss_pred cceeccccc----cccCCCcccCCCCCcEEEEECCCCCCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEE
Confidence 433221110 0111234455899999 887743 899998 899976532 14467777
Q ss_pred ecCc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch-hhcchHHHHHHH
Q psy14342 196 QGAE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES-EALDLVPLVTNA 265 (316)
Q Consensus 196 ~~g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~~~ 265 (316)
++++ .||.||+||++|++|+|.|||++|.+ ||.|.++++++.. +.+.+++++.+... +.+++.+.++++
T Consensus 407 d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~-~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~ 485 (516)
T PRK13383 407 DNAGRLFIVGREDDMIISGGENVYPRAVENALAA-HPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKDR 485 (516)
T ss_pred cCCccEEEeccccceEEECCEEECHHHHHHHHHh-CCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHHh
Confidence 5533 99999999999999999999999999 9999999999873 45667776654322 335677777777
Q ss_pred HHHhcCeeecEEEEEcCCCcccCCCchhhHHHHH
Q psy14342 266 VLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 299 (316)
Q Consensus 266 l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~ 299 (316)
+. .+..+ ..+.+++ ++|+|++||++|++|.
T Consensus 486 l~-~~~~p-~~i~~v~--~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 486 VS-RFEQP-RDINIVS--SIPRNPTGKVLRKELP 515 (516)
T ss_pred cc-cCCCC-cEEEEeC--CCCCCCCCcCcHHHhC
Confidence 75 45554 3566665 8999999999999873
No 109
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2.1e-33 Score=267.23 Aligned_cols=285 Identities=17% Similarity=0.142 Sum_probs=201.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhc------CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE------LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 74 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~------~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 74 (316)
++++++|||||||.||+|.++|+++....... ..+. ....++++.++|++|.+++...++.++..|+++++..
T Consensus 193 ~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~ 271 (541)
T TIGR03205 193 DVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQ 271 (541)
T ss_pred CeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecC
Confidence 47899999999999999999999987654322 2221 2234788999999999998887888999999887764
Q ss_pred CcccccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc-----------------cccccccch
Q psy14342 75 PSEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC-----------------ELYPSRHIA 134 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~-----------------e~~~~yG~t 134 (316)
. .++..+++.+++++++++..+|+.+..+........ ...+.+-.++ .+++.||+|
T Consensus 272 ~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~T 347 (541)
T TIGR03205 272 R----FDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMT 347 (541)
T ss_pred C----CCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHHhCCCeecccccc
Confidence 3 268899999999999999999988765543211000 0011111111 388899999
Q ss_pred hccCCCCCCCceEEEEeeeccCcccccCCCce-EEe--cC-----------ceEEecC---CCcccCCCcC---------
Q psy14342 135 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEV--NP-----------ALWLSAV---SQYRVRDTFC--------- 188 (316)
Q Consensus 135 e~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~--d~-----------~l~v~~~---~gY~~~~~~~--------- 188 (316)
|++.......+. .....++.|.++++.. .+. |+ +|+++|+ .|||++++.+
T Consensus 348 E~~~~~~~~~~~----~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 423 (541)
T TIGR03205 348 ETCSPGTGHPPE----GPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRF 423 (541)
T ss_pred cCCcccccCCCC----CCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCc
Confidence 997543322210 0111223444678877 543 22 1899998 8999987654
Q ss_pred -CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc--hhhc
Q psy14342 189 -SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE--SEAL 256 (316)
Q Consensus 189 -~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~--~~~~ 256 (316)
++|.|++++ |. .||.||+||++|++|+|.|||++|.+ |+.|.+++|++.. +.+++++++.+.. .+.+
T Consensus 424 ~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 502 (541)
T TIGR03205 424 LTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYE-HPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAKPFSLD 502 (541)
T ss_pred ccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHh-CCCeeeEEEEecCCcccCceEEEEEEECCCCCcCCHH
Confidence 335666644 33 99999999999999999999999999 9999999999873 4567777666432 2345
Q ss_pred chHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHH
Q psy14342 257 DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLR 299 (316)
Q Consensus 257 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~ 299 (316)
++.+.+++.+. .+..| ..+.+++ +||+|++||++|++|+
T Consensus 503 ~l~~~~~~~l~-~~~~P-~~i~~~~--~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 503 ELRAFLAGKLG-KHELP-VAVEFVD--ELPRTPVGKLSRHELR 541 (541)
T ss_pred HHHHHHHhhcc-cccCC-cEEEEec--cCCCCcccceeHhhcC
Confidence 67777777776 45544 4566665 8999999999999874
No 110
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=5.2e-33 Score=265.93 Aligned_cols=295 Identities=15% Similarity=0.097 Sum_probs=199.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++++|||||||.||+|.+||+++..........+++.++|+++..+|++|.+++...++..+..|+++++. . .
T Consensus 196 ~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~~-~----~ 270 (567)
T PLN02479 196 QSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLR-Q----V 270 (567)
T ss_pred cceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhHHHHHHHHhhcCceEecc-C----C
Confidence 3578999999999999999999998776665566778888999999999999999877555566666655542 2 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh----hhcccccccc----------------cccccccchhccCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT----SLCRSMKLAC----------------ELYPSRHIALCLDPY 140 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~----~~~~~~~ls~----------------e~~~~yG~te~~~~~ 140 (316)
++..+++.++++++++++.+|+.+..+........ ...+.+-..+ .+++.||+||++...
T Consensus 271 ~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~ 350 (567)
T PLN02479 271 TAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSEKGFRVTHTYGLSETYGPS 350 (567)
T ss_pred CHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHhcCCceecccccccccccc
Confidence 68899999999999999999998876544321100 0001111111 278899999985322
Q ss_pred CCCC--ceEEE----EeeeccCcccccCCCce--EEec--------------CceEEecC---CCcccCCCcCCC-----
Q psy14342 141 CGLG--FALWV----LSSVYSGHHSILIPPSE--VEVN--------------PALWLSAV---SQYRVRDTFCSC----- 190 (316)
Q Consensus 141 ~~~~--~~~~~----~~~~~~g~~~~~~~g~~--~i~d--------------~~l~v~~~---~gY~~~~~~~~~----- 190 (316)
.... +.+.. ......+..+.+.+|.. +++| ++|+++|+ .|||++++.+..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g 430 (567)
T PLN02479 351 TVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFANG 430 (567)
T ss_pred cceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhcCC
Confidence 1110 00000 00000001122344432 3332 22999998 899999887643
Q ss_pred -----CceeeecCc----CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCch---
Q psy14342 191 -----NGALYQGAE----RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNES--- 253 (316)
Q Consensus 191 -----d~g~~~~g~----~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~--- 253 (316)
|.|++++++ .||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.+++++.+.+...
T Consensus 431 ~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 509 (567)
T PLN02479 431 WFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYT-HPAVLEASVVARPDERWGESPCAFVTLKPGVDKSD 509 (567)
T ss_pred ceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHh-CcccceeeEEeccchhcCceeEEEEEecCcccccc
Confidence 555555432 99999999999999999999999999 9999999999984 35677776654321
Q ss_pred ---hhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCC
Q psy14342 254 ---EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQ 306 (316)
Q Consensus 254 ---~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~ 306 (316)
..+++.+.+++.+. .+..+ ..+.+ ..+|+|++||++|++|+++....+
T Consensus 510 ~~~~~~~l~~~~~~~l~-~~~~P-~~~~~---~~iP~t~~gKv~r~~L~~~~~~~~ 560 (567)
T PLN02479 510 EAALAEDIMKFCRERLP-AYWVP-KSVVF---GPLPKTATGKIQKHVLRAKAKEMG 560 (567)
T ss_pred hhhhHHHHHHHHHhhcc-cccCC-ceEEe---ccCCCCCccCeeHHHHHHHHHhhC
Confidence 11345555555554 34444 33333 369999999999999999876633
No 111
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.1e-33 Score=263.43 Aligned_cols=289 Identities=15% Similarity=0.091 Sum_probs=199.6
Q ss_pred eEEEEeccCCCCCceEEEEe--HHHHHH---HHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCc
Q psy14342 2 LAYLDFSVSTTGMLAGIKMS--HAAVTS---LCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPS 76 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t--~~~l~~---~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~ 76 (316)
.++++|||||||.||+|.++ |.++.. ........+++.++++++.++|++|.+++.. .+.++..|+++++.+..
T Consensus 156 ~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~~ 234 (511)
T PRK13391 156 GTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRA-VMLVIRLGGTVIVMEHF 234 (511)
T ss_pred ccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHH-HHHHHHcCceEEECCCC
Confidence 57899999999999999965 555432 2334455677888899999999999988876 67889999999987532
Q ss_pred ccccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhcccccccc-----------------cccccccch
Q psy14342 77 EVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLAC-----------------ELYPSRHIA 134 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~-----------------e~~~~yG~t 134 (316)
+|..+++.+++++++++..+|+++..+........ ...+.+-..+ .+++.||+|
T Consensus 235 ----~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~t 310 (511)
T PRK13391 235 ----DAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAAT 310 (511)
T ss_pred ----CHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccc
Confidence 68899999999999999999998765543221110 0001111111 277889999
Q ss_pred hccCCCCCCCceEEEEeeeccCcccccCCCceEEecCc-----------eEEecC--CCcccCCCcCC------------
Q psy14342 135 LCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPA-----------LWLSAV--SQYRVRDTFCS------------ 189 (316)
Q Consensus 135 e~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~i~d~~-----------l~v~~~--~gY~~~~~~~~------------ 189 (316)
|++......... .....++.+.+++|.-+++|++ |+++|+ .|||++++.+.
T Consensus 311 E~~~~~~~~~~~----~~~~~~~vG~~~~g~~~i~d~~~~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~T 386 (511)
T PRK13391 311 EGLGFTACDSEE----WLAHPGTVGRAMFGDLHILDDDGAELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTV 386 (511)
T ss_pred cccceEEecCcc----ccccCCCcCCcccceEEEECCCCCCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEec
Confidence 987432211110 0112234455777722665543 899999 89999766542
Q ss_pred CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhh----c
Q psy14342 190 CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEA----L 256 (316)
Q Consensus 190 ~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~----~ 256 (316)
+|.|++++ |. .||.||+||++|++|+|.|||++|.+ ||.|.+|+|++.. +.+++++......... +
T Consensus 387 GD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~-~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (511)
T PRK13391 387 GDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLIT-HPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAA 465 (511)
T ss_pred CCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHh-CCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHH
Confidence 24455543 32 89999999999999999999999999 9999999999873 3566666554432222 3
Q ss_pred chHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 257 DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 257 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
++.++++..+. .+..| ..+.++. ++|+|++||++|+.|++.|..
T Consensus 466 ~l~~~~~~~l~-~~~~P-~~i~~~~--~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 466 ELIAFCRQRLS-RQKCP-RSIDFED--ELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred HHHHHHHhhcc-cCcCC-cEEEEee--cCCCCCccceeHHHHHHHhhc
Confidence 45555555544 33343 3455544 899999999999999998864
No 112
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-32 Score=262.72 Aligned_cols=293 Identities=15% Similarity=0.164 Sum_probs=202.9
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|||||||.||+|+++|+++..++......+++..+|+++..+|++|.+++...++..+ .|+.+++... .
T Consensus 183 ~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~-~~g~~~~~~~----~ 257 (545)
T PRK08162 183 DAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAA-RAGTNVCLRK----V 257 (545)
T ss_pred CeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHH-HccEEEEeCC----C
Confidence 4789999999999999999999988777666566677888899999999999999877555444 4555555432 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---hhcccccccc----------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---SLCRSMKLAC----------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~~~~~~~ls~----------------e~~~~yG~te~~~~~~ 141 (316)
+|..+++.++++++|++..+|+++..+........ .....+-..+ ++++.||+||++....
T Consensus 258 ~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 337 (545)
T PRK08162 258 DPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEIGFDLTHVYGLTETYGPAT 337 (545)
T ss_pred CHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHhCCceeecccccccCccee
Confidence 68899999999999999999998876654322110 0000111111 3889999999853322
Q ss_pred CCCc-eEEE--E---eeeccCcccccCCCc-e-EEecC--------------ceEEecC---CCcccCCCcC--------
Q psy14342 142 GLGF-ALWV--L---SSVYSGHHSILIPPS-E-VEVNP--------------ALWLSAV---SQYRVRDTFC-------- 188 (316)
Q Consensus 142 ~~~~-~~~~--~---~~~~~g~~~~~~~g~-~-~i~d~--------------~l~v~~~---~gY~~~~~~~-------- 188 (316)
.... ..+. . .....++.+++.+.. . .++|+ +|+++|+ .|||++++.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~ 417 (545)
T PRK08162 338 VCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAFAGGW 417 (545)
T ss_pred ecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHhhCCC
Confidence 1110 0000 0 000011222333332 2 44442 2899999 8999987665
Q ss_pred --CCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCc-hhhc
Q psy14342 189 --SCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNE-SEAL 256 (316)
Q Consensus 189 --~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~-~~~~ 256 (316)
++|.|++++ |. +||.||+||++|++|+|.|||++|.+ ||.|.+++|++.. +.+++++++.+.. .+.+
T Consensus 418 ~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~-~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~~~ 496 (545)
T PRK08162 418 FHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYR-HPAVLVAAVVAKPDPKWGEVPCAFVELKDGASATEE 496 (545)
T ss_pred cccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHh-CCcccEEEEEeeeccccCceEEEEEEeCCCCCCCHH
Confidence 336666654 43 99999999999999999999999999 9999999999873 3567777665433 2345
Q ss_pred chHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 257 DLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 257 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
++.+.+++.+. .+..|. .+.+ .++|+|++||++|+.|++++.+
T Consensus 497 ~l~~~~~~~l~-~~~~P~-~~~~---~~iP~t~~gK~~r~~l~~~~~~ 539 (545)
T PRK08162 497 EIIAHCREHLA-GFKVPK-AVVF---GELPKTSTGKIQKFVLREQAKS 539 (545)
T ss_pred HHHHHHHHhcc-cccCCc-EEEe---cccCCCCCcCCcHHHHHHHHhh
Confidence 67777777765 555553 3433 3699999999999999998765
No 113
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-32 Score=260.45 Aligned_cols=291 Identities=14% Similarity=0.071 Sum_probs=199.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHH---------hcC------CCCCceEEecCCcCChhhhHHHHhhhh
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA---------CEL------YPSRHIALCLDPYCGLGFALWVLSSVY 65 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~---------~~~------~~~d~~l~~~p~~h~~g~~~~~~~~l~ 65 (316)
|.++|+|||||||.||+|+++|+++..+....... +.+ ..+++++..+|++|..+++. ++.++.
T Consensus 164 ~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~-~~~~l~ 242 (533)
T PRK07798 164 DDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQWA-AFAALF 242 (533)
T ss_pred CceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHHH-HHHHHh
Confidence 35789999999999999999999987654433222 122 56788999999999999985 889999
Q ss_pred cCceeeeeCCcccccChHHHHHHHhccceeeEEecccchhh-HHhhHH-h--hh-hhcccccccc---------------
Q psy14342 66 SGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGMLAG-IKMSHA-A--VT-SLCRSMKLAC--------------- 125 (316)
Q Consensus 66 ~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~-l~~~~~-~--~~-~~~~~~~ls~--------------- 125 (316)
.|+++++.+.. ..+|..+++.+++++++++.++|+.+.. +..... . .. ...+.+-..+
T Consensus 243 ~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~ 320 (533)
T PRK07798 243 SGQTVVLLPDV--RFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALLELL 320 (533)
T ss_pred cCceEEEecCC--CcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHHHHc
Confidence 99999998744 2368899999999999998888765432 211111 0 00 0011111111
Q ss_pred ---cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCC
Q psy14342 126 ---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDT 186 (316)
Q Consensus 126 ---e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~ 186 (316)
++++.||+||++......... .....|. ..+.++.. .++|++ +.++++ .|||+++.
T Consensus 321 ~~~~~~~~YG~tE~~~~~~~~~~~----~~~~~g~-~~~~~~~~~~i~~~~~~~~~~g~~~~g~l~~~~~~~~gy~~~~~ 395 (533)
T PRK07798 321 PNVVLTDSIGSSETGFGGSGTVAK----GAVHTGG-PRFTIGPRTVVLDEDGNPVEPGSGEIGWIARRGHIPLGYYKDPE 395 (533)
T ss_pred CCCeEEeeecccccccccccCCCC----CCccCCC-CccCCCceEEEECCCCCCCCCCCCCeeEEEeecCccccccCChh
Confidence 277889999985433221110 0011110 13566666 666553 344555 89999876
Q ss_pred cCC--------------CCceeee-cCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----CcEE
Q psy14342 187 FCS--------------CNGALYQ-GAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLV 243 (316)
Q Consensus 187 ~~~--------------~d~g~~~-~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~ 243 (316)
.+. +|.|+++ +|. .||.||+||.+|++|+|.|||++|.+ +|.|.+++|++.. +.+.
T Consensus 396 ~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~-~~~v~~~~v~~~~~~~~~~~~~ 474 (533)
T PRK07798 396 KTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKA-HPDVADALVVGVPDERWGQEVV 474 (533)
T ss_pred hhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHh-CccceeEEEEeccCcccCceEE
Confidence 442 2555554 343 99999999999999999999999999 9999999999863 3566
Q ss_pred EEEEecCCc-hhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 244 VVVELDGNE-SEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 244 ~~v~~~~~~-~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++++.+.. .+.+++.+.+++.+. .+..| ..+.++ +++|+|++||++|+.|++...+
T Consensus 475 ~~v~~~~~~~~~~~~l~~~l~~~l~-~~~~P-~~i~~~--~~iP~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 475 AVVQLREGARPDLAELRAHCRSSLA-GYKVP-RAIWFV--DEVQRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred EEEEECCCCCCCHHHHHHHHhhhcc-cCCCC-eEEEEc--ccCCCCCcchhhHHHHhhhhcc
Confidence 666655432 344677777877776 45554 344554 4899999999999999987653
No 114
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=9.5e-32 Score=243.73 Aligned_cols=265 Identities=11% Similarity=0.039 Sum_probs=180.7
Q ss_pred eEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCC--CCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 2 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYP--SRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~--~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
.++++|||||||.||+|.+||+++..++..+...++++. .|+++.++|++|.+|+.+.++.++..|+++++.++.
T Consensus 97 ~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~--- 173 (386)
T TIGR02372 97 ARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAA--- 173 (386)
T ss_pred ceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCC---
Confidence 578999999999999999999999998888888787754 467999999999999877788899999999887542
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhc---ccccccc------------cccccccchhccCCCCCCC
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLC---RSMKLAC------------ELYPSRHIALCLDPYCGLG 144 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~---~~~~ls~------------e~~~~yG~te~~~~~~~~~ 144 (316)
+|..+++.++.. +++..+|+++..+.......+... .+..++. .+++.||+||+++......
T Consensus 174 -~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~~~l~slr~i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~~~~~ 250 (386)
T TIGR02372 174 -PASGIMRHARPG--DLIVGTPFIWEQLADLDYRLPGVVGVSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIGLREA 250 (386)
T ss_pred -ChHHHHHhhccC--CEEEECcHHHHHHHhhCcCCCcceeEecCCCCCHHHHHHHHHhcccchhheeccccccccccccC
Confidence 466677777654 667778888766544322111100 0000000 2678999999865322111
Q ss_pred ceEEEEeeeccCcccccCCCce-EEecCceEEecCCCcccCCCcCCCCceeeecCc----CCcccceeEECCcccChHhH
Q psy14342 145 FALWVLSSVYSGHHSILIPPSE-VEVNPALWLSAVSQYRVRDTFCSCNGALYQGAE----RLALDETIMLRGMRYHPIDI 219 (316)
Q Consensus 145 ~~~~~~~~~~~g~~~~~~~g~~-~i~d~~l~v~~~~gY~~~~~~~~~d~g~~~~g~----~GR~dd~i~~~G~~v~p~eI 219 (316)
.+..+.++|+.+ .+ +.. ...|+..+ ...+|.|++++.+ .||.||+||++|+||+|.||
T Consensus 251 ----------~~~~~~~~p~~~~~~-~~~-~~~g~~~~-----~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eI 313 (386)
T TIGR02372 251 ----------PDDPFRLLPDLACFA-DTL-SSAGLARR-----LDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHV 313 (386)
T ss_pred ----------CCCCcccCCCccccC-CCc-cCCCccce-----eecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHH
Confidence 111123567776 33 211 11122111 1235777775543 99999999999999999999
Q ss_pred HHHHHHhccccceeEEEeeCCcEEEEEEecCCchh---hcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhh
Q psy14342 220 ENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESE---ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQ 294 (316)
Q Consensus 220 E~~l~~~~p~v~~~~v~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~ 294 (316)
|++|.+ ||.|.+|+|...++++.+++++.+.... .+++.+++++++. .++.| ..+.+++ ++|+|++||++
T Consensus 314 E~~l~~-~p~V~~~~v~~~g~~~~a~vv~~~~~~~~~~~~~l~~~~~~~L~-~~~~P-~~i~~~~--~lP~t~~GKi~ 386 (386)
T TIGR02372 314 RDILER-NPRVRAAAVRLDGRRLKAFIVVAEDADEAELEIELRATAARHLP-APARP-DRFRFGT--ELPRTGAGKLA 386 (386)
T ss_pred HHHHHc-CCCceEEEEEcCCceEEEEEEECCCCChHHHHHHHHHHHHHhCC-CCCCC-cEEEEcc--cCCCCCCCCcC
Confidence 999999 9999999998777888777776643221 2345555555554 34444 4555554 99999999974
No 115
>KOG1256|consensus
Probab=100.00 E-value=2.2e-32 Score=253.04 Aligned_cols=300 Identities=13% Similarity=0.035 Sum_probs=205.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHH---HHHhc---CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeC
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM---KLACE---LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 74 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~---~~~~~---~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 74 (316)
|.|.|.|||||||.||||++||+|+.+.+... ..... ....|+.++.+|++|++..+. -...+..|+.+-+..
T Consensus 256 d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAHi~er~~-~~~~~~~G~~IgF~~ 334 (691)
T KOG1256|consen 256 DLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAHIFERVV-ELYTFYIGAKIGFAR 334 (691)
T ss_pred ceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHHHHHHHH-HHhHhhcccEEEEec
Confidence 57899999999999999999999998865432 12111 223599999999999999998 455668899999975
Q ss_pred CcccccChHHHHHHHhccceeeEEecccchhhHHhhHH----hh--------------hh---hcccccc--cc------
Q psy14342 75 PSEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHA----AV--------------TS---LCRSMKL--AC------ 125 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~----~~--------------~~---~~~~~~l--s~------ 125 (316)
+ |+....+-+++.++|++..+|-.+..+..... +. +. ...+... +.
T Consensus 335 g-----D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lV 409 (691)
T KOG1256|consen 335 G-----DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLV 409 (691)
T ss_pred C-----ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHH
Confidence 3 56667777999999998888887763321111 00 00 0011111 00
Q ss_pred ------------------------------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EE
Q psy14342 126 ------------------------------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VE 168 (316)
Q Consensus 126 ------------------------------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i 168 (316)
.++++||+||++.+.....+. . ...|..|.|+|+.+ ++
T Consensus 410 f~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~~----d-~~lgsvG~p~p~~~vKL 484 (691)
T KOG1256|consen 410 FHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLPG----D-NVLGSVGPPVPGNEVKL 484 (691)
T ss_pred HHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccCC----C-CCCCCcCCcccCceEEE
Confidence 188999999998665444431 1 13344445899999 88
Q ss_pred ecCc------------eEEecC---CCcccCCCcCCC-----------CceeeecCc----CCcccceeEE-CCcccChH
Q psy14342 169 VNPA------------LWLSAV---SQYRVRDTFCSC-----------NGALYQGAE----RLALDETIML-RGMRYHPI 217 (316)
Q Consensus 169 ~d~~------------l~v~~~---~gY~~~~~~~~~-----------d~g~~~~g~----~GR~dd~i~~-~G~~v~p~ 217 (316)
+|.. |++||+ +||+++|+.|++ |.|+++.++ .||.|++||. +|++|.|+
T Consensus 485 ~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe 564 (691)
T KOG1256|consen 485 VDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPE 564 (691)
T ss_pred echHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCccEEEEecccceEEcCCCCccChH
Confidence 5543 999999 999999998876 444444333 9999999997 89999999
Q ss_pred hHHHHHHHhccccceeEEEeeCC--cEEEEEEecCCchh----h-----------------cchHHHHHHHHHH----hc
Q psy14342 218 DIENSVMRAHKKIAECAVFTWTN--LLVVVVELDGNESE----A-----------------LDLVPLVTNAVLE----EH 270 (316)
Q Consensus 218 eIE~~l~~~~p~v~~~~v~~~~~--~~~~~v~~~~~~~~----~-----------------~~l~~~~~~~l~~----~~ 270 (316)
.||++..+ -+-|.+.+|.+... -+++++.+++.... . +.++.++.+...+ ..
T Consensus 565 ~IEniy~~-~~~V~qi~V~g~s~~~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~f 643 (691)
T KOG1256|consen 565 KIENIYKR-SLPVQQIFVLGDSLRSFLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGF 643 (691)
T ss_pred HHHHHHhc-CCceEEEEEECCcchhcEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccCh
Confidence 99999999 89999999998865 47777777542110 0 1112222222211 11
Q ss_pred CeeecEEEEEcCC-Cc---ccCCCchhhHHHHHHHHHcCCCCcchhhc
Q psy14342 271 HLIVGVAVVVDPG-VV---PINSRGEKQRMHLRDGFLADQLDPIYVAY 314 (316)
Q Consensus 271 ~~~~~~~~~~~~~-~l---P~t~~gKi~r~~l~~~~~~~~~~~~~~~~ 314 (316)
.. ...+.+.+.. ++ -.||+-|++|..+.+.|.. +++.+|...
T Consensus 644 e~-vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~-~Id~mY~~~ 689 (691)
T KOG1256|consen 644 EQ-VKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKK-QIDELYKEI 689 (691)
T ss_pred hh-EeeEEEecccccccCCccchhhhhhhHHHHHHHHH-HHHHHHhhc
Confidence 11 1234443211 23 3699999999999998886 899898654
No 116
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.98 E-value=1.7e-31 Score=268.66 Aligned_cols=286 Identities=14% Similarity=0.056 Sum_probs=193.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|+++|+|| ||||.||++.++|.++..........+++.++|++++++|++|++|++..++.++..|+++++.+ . .
T Consensus 607 d~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~-~---~ 681 (994)
T PRK07868 607 DLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSR-G---L 681 (994)
T ss_pred ccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecC-C---C
Confidence 57999999 57777777777887665555555667788899999999999999999875555666566555543 2 2
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccc--cc-----------------cccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKL--AC-----------------ELYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~l--s~-----------------e~~~~yG~te~~~~~~ 141 (316)
+|..+++.++++++|+++.+|+++..+.............+++ ++ .+++.||+||++....
T Consensus 682 ~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~ 761 (994)
T PRK07868 682 DPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFIGSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLA 761 (994)
T ss_pred CHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEecCCCCHHHHHHHHHHhCchheeeeeeccccccccc
Confidence 7899999999999999999999887665432210000001110 11 2788999999753221
Q ss_pred CCCceEEEEeeeccCcccccCCCc-e-EEe-----------cCc-------------eEEecC----------CCcccC-
Q psy14342 142 GLGFALWVLSSVYSGHHSILIPPS-E-VEV-----------NPA-------------LWLSAV----------SQYRVR- 184 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g~~~~~~~g~-~-~i~-----------d~~-------------l~v~~~----------~gY~~~- 184 (316)
..+ ....++.|.|+||+ + ++. |++ |+++++ .+|+++
T Consensus 762 -~~~------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~ 834 (994)
T PRK07868 762 -NVS------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPA 834 (994)
T ss_pred -ccC------CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCCCChhhhhHhcccccC
Confidence 110 11223455678887 3 332 111 555554 122221
Q ss_pred -CCcCCCCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC----CcEEEEEEecCCc-hh
Q psy14342 185 -DTFCSCNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT----NLLVVVVELDGNE-SE 254 (316)
Q Consensus 185 -~~~~~~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~----~~~~~~v~~~~~~-~~ 254 (316)
-.--++|.|++++ |. +||.||+||++|++|+|.|||++|.+ ||.|.+|+|+++. +.+++++++.+.. .+
T Consensus 835 dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~-hp~V~~aaVvg~~d~~~~~~~a~Vv~~~~~~~~ 913 (994)
T PRK07868 835 DTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGR-IGGVDLAVTYGVEVGGRQLAVAAVTLRPGAAIT 913 (994)
T ss_pred CEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhc-CCCeeEEEEEeecCCCCceEEEEEEeCCCCcCC
Confidence 0112336666654 43 99999999999999999999999999 9999999999984 3567777665543 23
Q ss_pred hcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 255 ALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 255 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
.+++.+.+++ +. .+..| ..+.+++ .||+|++||++|++|+++-..
T Consensus 914 ~~~L~~~l~~-l~-~y~vP-~~i~~v~--~lP~T~sGKi~r~~L~~~~lp 958 (994)
T PRK07868 914 AADLTEALAS-LP-VGLGP-DIVHVVP--EIPLSATYRPTVSALRAAGIP 958 (994)
T ss_pred HHHHHHHHHh-CC-CCcCC-eEEEEeC--CCCCCccccEehHHHHhcCCC
Confidence 4567777764 43 45544 4666666 899999999999999877443
No 117
>KOG1180|consensus
Probab=99.97 E-value=1.2e-31 Score=238.96 Aligned_cols=304 Identities=12% Similarity=0.105 Sum_probs=209.6
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHh-cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC-ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
|+|+|+|||||||.||||+++|.|+++.+.+..... .+.+.|+.+..+|+.|++.+.+ =+..+..|+.+-..+|..+.
T Consensus 238 Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~a-E~~~ft~G~~iGY~S~~TLt 316 (678)
T KOG1180|consen 238 DIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTA-ELVCFTWGGRIGYSSPLTLT 316 (678)
T ss_pred ceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHH-HHHHHhhCCEeecCCcceec
Confidence 789999999999999999999999999888777665 5778999999999999999988 46788888888776665443
Q ss_pred cChHHH----HHHHhccceeeEEecccchhhHHhhH-Hhhh-------------h-----hcc-----------------
Q psy14342 80 VNPALW----LSAVSQYRVRDTFCSYGMLAGIKMSH-AAVT-------------S-----LCR----------------- 119 (316)
Q Consensus 80 ~~~~~~----~~~~~~~~~t~~~~~~~~~~~l~~~~-~~~~-------------~-----~~~----------------- 119 (316)
...... ---+..+++|++.++|.++....... .+.. . ..+
T Consensus 317 dts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKI 396 (678)
T KOG1180|consen 317 DTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKI 396 (678)
T ss_pred ccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHH
Confidence 322111 12345677777766666654221100 0000 0 000
Q ss_pred --------cccccc------c------------ccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc
Q psy14342 120 --------SMKLAC------E------------LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA 172 (316)
Q Consensus 120 --------~~~ls~------e------------~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~ 172 (316)
+..|++ | +.++||.||+|.+.+..+|.. -+.|..|-|++=.+ +++|-+
T Consensus 397 r~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d-----~~~g~vG~pl~c~eiKLvdw~ 471 (678)
T KOG1180|consen 397 RALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPED-----FSTGRVGAPLPCCEIKLVDWE 471 (678)
T ss_pred HHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccccccccchhcccEecChhh-----cccccccCCccceEEEEEEhh
Confidence 001111 1 678999999998887777632 22232333677777 666532
Q ss_pred --------------eEEecC---CCcccCCCcCCC--------------CceeeecCc----CCcccceeEE-CCcccCh
Q psy14342 173 --------------LWLSAV---SQYRVRDTFCSC--------------NGALYQGAE----RLALDETIML-RGMRYHP 216 (316)
Q Consensus 173 --------------l~v~~~---~gY~~~~~~~~~--------------d~g~~~~g~----~GR~dd~i~~-~G~~v~p 216 (316)
||++|+ .||++|++.++. |.|.+++++ .+|.+|++|. +|+.|++
T Consensus 472 EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL 551 (678)
T KOG1180|consen 472 EGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISL 551 (678)
T ss_pred hcCccCCCCCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeeh
Confidence 999999 999999988765 334443322 8999999997 9999999
Q ss_pred HhHHHHHHHhccccceeEEEeeCC--cEEEEEEecCCchh------------h------cchHHHHHHHHHH--------
Q psy14342 217 IDIENSVMRAHKKIAECAVFTWTN--LLVVVVELDGNESE------------A------LDLVPLVTNAVLE-------- 268 (316)
Q Consensus 217 ~eIE~~l~~~~p~v~~~~v~~~~~--~~~~~v~~~~~~~~------------~------~~l~~~~~~~l~~-------- 268 (316)
+-+|+++.. .|.|...+|.+... .++++|++++.... . .++.+++...+.+
T Consensus 552 ~KvEa~l~s-~p~V~NICvyAd~~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~ 630 (678)
T KOG1180|consen 552 GKVEAALRS-SPYVDNICVYADSNKSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLE 630 (678)
T ss_pred HHHHHHHhc-CcchhheEEecccccceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccc
Confidence 999999999 99999999999865 57777777753211 0 1223333333221
Q ss_pred hcCeeecEEEEEcCCCcc----cCCCchhhHHHHHHHHHcCCCCcchhh
Q psy14342 269 EHHLIVGVAVVVDPGVVP----INSRGEKQRMHLRDGFLADQLDPIYVA 313 (316)
Q Consensus 269 ~~~~~~~~~~~~~~~~lP----~t~~gKi~r~~l~~~~~~~~~~~~~~~ 313 (316)
...++ ..+++.+...-| .|+.-|++|+.++..|.+ +++.+|..
T Consensus 631 ~iEip-~~I~l~~e~WTPenGlvT~A~KLKRk~I~~~~k~-ei~~~Y~~ 677 (678)
T KOG1180|consen 631 RIEIP-AKIVLSPEPWTPENGLVTAALKLKRKEILAAYKK-EIDRLYKE 677 (678)
T ss_pred ccccc-ceeEecCCCcCCCccccHHHHHhhHHHHHHHHHH-HHHHHhcc
Confidence 23444 356666655556 467899999999999997 88888854
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.96 E-value=2.1e-28 Score=224.58 Aligned_cols=231 Identities=16% Similarity=0.142 Sum_probs=173.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++++|||||||.||+|.+||+++..++..+...+++.++|+++...|++|.+++.. ++.++..|+++++.++....
T Consensus 121 ~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~g~~~~~~~~~~~~- 198 (408)
T TIGR01733 121 DLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEE-IFGTLLAGATLVVPPEDEER- 198 (408)
T ss_pred CcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHH-HHHHHhCCCEEEEcChhhcc-
Confidence 5789999999999999999999999999888888999999999999999999988775 89999999999988765432
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc------------------cccccccchhccCCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC------------------ELYPSRHIALCLDPYCG 142 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~------------------e~~~~yG~te~~~~~~~ 142 (316)
.+..|.+.+++++++.+.++|..+..+...........+.+-..+ ++.+.||+||++.....
T Consensus 199 ~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~ 278 (408)
T TIGR01733 199 DAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTA 278 (408)
T ss_pred CHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEE
Confidence 578999999999999999999988766554331111111111111 37889999998643321
Q ss_pred CC-ceEEEEeeeccCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCC-----------------
Q psy14342 143 LG-FALWVLSSVYSGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCS----------------- 189 (316)
Q Consensus 143 ~~-~~~~~~~~~~~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~----------------- 189 (316)
.. ........ ..++.|.+++|++ +++|++ |+++++ .||+++++.+.
T Consensus 279 ~~~~~~~~~~~-~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (408)
T TIGR01733 279 TLVDADDAPRE-SPVPIGRPLANTRLYVLDDDLRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLY 357 (408)
T ss_pred EEcCccccCCc-cccccCcccCCceEEEECCCCCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEE
Confidence 10 00000000 1223445799999 888763 999999 89998765432
Q ss_pred --CCceeeec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEE
Q psy14342 190 --CNGALYQG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAV 235 (316)
Q Consensus 190 --~d~g~~~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v 235 (316)
+|.|++++ |. .||.||+|+.+|++|+|.|||++|.+ ||.|.+|+|
T Consensus 358 ~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~-~~~v~~~~v 408 (408)
T TIGR01733 358 RTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLR-HPGVREAVV 408 (408)
T ss_pred ECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhc-CcchhhhcC
Confidence 24555543 33 99999999999999999999999998 999998875
No 119
>KOG1179|consensus
Probab=99.95 E-value=2.6e-28 Score=218.44 Aligned_cols=292 Identities=10% Similarity=0.037 Sum_probs=205.8
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
++++.||||||||.||+.+++|.....-+..+...++.+++|+++.++|++|..|.+.++-+.+..|+|+|+-...
T Consensus 243 s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKF---- 318 (649)
T KOG1179|consen 243 SPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKF---- 318 (649)
T ss_pred ceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEeccc----
Confidence 5789999999999999999999987777777788899999999999999999999999999999999999997654
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhhhhcccccccc------c-------------ccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSLCRSMKLAC------E-------------LYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~~~~~~ls~------e-------------~~~~yG~te~~~~~~ 141 (316)
++..||+-+.+|++|++.-....++.+...+....+..+++++.- + +.+.||.||......
T Consensus 319 SAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~ 398 (649)
T KOG1179|consen 319 SASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLV 398 (649)
T ss_pred chhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCCCCchHHHHHHHHcCCCeEEEEeccccCcceee
Confidence 567899999999999999899999888776655443345555433 1 788899998753211
Q ss_pred ---------CCCce----EEEEeeeccCc-ccccCCCce---EEecCc--------eEEecC----CCcccCCCcCCC--
Q psy14342 142 ---------GLGFA----LWVLSSVYSGH-HSILIPPSE---VEVNPA--------LWLSAV----SQYRVRDTFCSC-- 190 (316)
Q Consensus 142 ---------~~~~~----~~~~~~~~~g~-~~~~~~g~~---~i~d~~--------l~v~~~----~gY~~~~~~~~~-- 190 (316)
+..+. ++..+.+..++ .+-|+.+.+ .-+.+. +.-+.| .||.++.+++.+
T Consensus 399 N~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl 478 (649)
T KOG1179|consen 399 NYDGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKL 478 (649)
T ss_pred eecCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhh
Confidence 00000 00011111110 000111111 111111 223344 799997777655
Q ss_pred --------C----ceee---ec-Cc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-----C--cEEE
Q psy14342 191 --------N----GALY---QG-AE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-----N--LLVV 244 (316)
Q Consensus 191 --------d----~g~~---~~-g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~--~~~~ 244 (316)
| +|++ |+ |. .+|..|.++..||||+..|||+.|.. ...++|+.|.|+. + .+++
T Consensus 479 ~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~-~~~~~dv~VYGV~VP~~EGRaGMAa 557 (649)
T KOG1179|consen 479 LRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSA-LDFLQDVNVYGVTVPGYEGRAGMAA 557 (649)
T ss_pred HHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhh-hccccceeEEEEecCCccCccceEE
Confidence 2 3433 22 32 89999999999999999999999999 9999999999992 2 3555
Q ss_pred EEEecCCchhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHH
Q psy14342 245 VVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDG 301 (316)
Q Consensus 245 ~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~ 301 (316)
++.......+.+.+-+.++..|+ .|..| ..+++.+ ++++|.+=|..+..|.+.
T Consensus 558 I~~~p~~~~d~~~l~~~l~~~LP-~YA~P-~FlRl~~--~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 558 IVLDPTTEKDLEKLYQHLRENLP-SYARP-RFLRLQD--EIEKTGTFKLQKTELQKE 610 (649)
T ss_pred EEecCcccchHHHHHHHHHhhCc-cccch-HHHHHHh--hhhcccchhhHHHHHHHc
Confidence 55222233445566666666666 45444 3445544 899999999999998876
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=99.95 E-value=1.4e-27 Score=242.41 Aligned_cols=293 Identities=9% Similarity=0.022 Sum_probs=194.9
Q ss_pred CeEEEEe---ccCCCCCceEEEEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeC
Q psy14342 1 MLAYLDF---SVSTTGMLAGIKMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 74 (316)
Q Consensus 1 ~~a~i~~---TSGTTG~PK~V~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 74 (316)
|++.|+| ||||||.||||++||+|++.++.++.... ...++|+.++++|++|+++.+. .+.+++.|+++.+.
T Consensus 599 DlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~~-~~~~l~~G~~I~~~- 676 (1452)
T PTZ00297 599 TVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRVF-VLGLFAHGSAVATV- 676 (1452)
T ss_pred cEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHHH-HHHHHHcCCEEEeC-
Confidence 5778885 99999999999999999999888765532 3457899999999999999765 67889999988642
Q ss_pred CcccccChHHHHHHHhccceeeEEecccchhhHHhhHHh-hhh---h------------c-----c--------------
Q psy14342 75 PSEVEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAA-VTS---L------------C-----R-------------- 119 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~-~~~---~------------~-----~-------------- 119 (316)
++..+++.++++++|+++.+|.++..+...... ... . . .
T Consensus 677 ------d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~k 750 (1452)
T PTZ00297 677 ------DAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRA 750 (1452)
T ss_pred ------CHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 477889999999999999999988744322111 000 0 0 0
Q ss_pred -------cc--cccc--------------cccccccchhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecC-ceE
Q psy14342 120 -------SM--KLAC--------------ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNP-ALW 174 (316)
Q Consensus 120 -------~~--~ls~--------------e~~~~yG~te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~-~l~ 174 (316)
.+ -+++ .+..+||+||.+. .+.+. ... ..|.|+||++ ++.+. ++-
T Consensus 751 ir~~lGGrlr~~isGga~~~l~~~l~~~i~i~~g~glTE~~~---~~~~~-----~~~--~~G~PlpgvEvKI~~~~E~~ 820 (1452)
T PTZ00297 751 TQELLGGCVEKIVLCVSEESTSFSLLEHISVCYVPCLREVFF---LPSEG-----VFC--VDGTPAPSLQVDLEPFDEPS 820 (1452)
T ss_pred HHHHhcCCeEEEEECCCccccChHHhCCceEEEecceEEeee---ecCCC-----Ccc--cCCeecCceEEEEccccccc
Confidence 00 0000 0233556666321 11110 000 1255899999 88752 210
Q ss_pred ---EecC--CCcccCCCcCCCC-ceeeecCc---CCcccceeEE-CCcccChHhHHHHHHHhccccceeEEEeeCC-cEE
Q psy14342 175 ---LSAV--SQYRVRDTFCSCN-GALYQGAE---RLALDETIML-RGMRYHPIDIENSVMRAHKKIAECAVFTWTN-LLV 243 (316)
Q Consensus 175 ---v~~~--~gY~~~~~~~~~d-~g~~~~g~---~GR~dd~i~~-~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~~-~~~ 243 (316)
-+|. .+|++++++|..- .||+.+|. +||.||+||. +|++|+|+.||+.+.. +|.|.+++|+|.+. .++
T Consensus 821 ~~~~~GEIlvr~~kdpe~T~e~~~gW~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~-sp~I~qi~V~Gd~~k~lv 899 (1452)
T PTZ00297 821 DGAGIGQLVLAKKGEPRRTLPIAAQWKRDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQ-SRYVNDIFLYADPSRPII 899 (1452)
T ss_pred CCCCCCeEEEEECCChHHHHHhhCcCccCCeEEEEeccccceECCCCcEEcHHHHHHHHhc-CCCccEEEEEecCCCceE
Confidence 0122 3577888877663 47777776 9999999996 9999999999999999 99999999999854 467
Q ss_pred EEEEecCCchh--------------------hcchHH----HHHHH---HHHhcCe----eecEEEEEcCCCc-----cc
Q psy14342 244 VVVELDGNESE--------------------ALDLVP----LVTNA---VLEEHHL----IVGVAVVVDPGVV-----PI 287 (316)
Q Consensus 244 ~~v~~~~~~~~--------------------~~~l~~----~~~~~---l~~~~~~----~~~~~~~~~~~~l-----P~ 287 (316)
+++.+.+.... ..++.+ .+++. +.+..+. .+..+.+++ +.+ -+
T Consensus 900 ALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~-~~Ft~enGlL 978 (1452)
T PTZ00297 900 AIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHP-HAFKDHSTFL 978 (1452)
T ss_pred EEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeC-CCCCCCCCcC
Confidence 77766542111 112222 12222 2211111 112233433 222 47
Q ss_pred CCCchhhHHHHHHHHHcCCCCcchhhc
Q psy14342 288 NSRGEKQRMHLRDGFLADQLDPIYVAY 314 (316)
Q Consensus 288 t~~gKi~r~~l~~~~~~~~~~~~~~~~ 314 (316)
|++.|++|+.+.+.|.+ .++.+|...
T Consensus 979 TPTlKlKR~~I~~kY~~-~Ie~LY~~~ 1004 (1452)
T PTZ00297 979 TPYGKIRRDAVHSYFSS-VIERFYSDV 1004 (1452)
T ss_pred ChhhhhhHHHHHHHHHH-HHHHHhccc
Confidence 99999999999999997 888888653
No 121
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.95 E-value=5.9e-26 Score=209.60 Aligned_cols=280 Identities=12% Similarity=0.104 Sum_probs=179.2
Q ss_pred eEEEEeccCCCCCceEEEEeHHHHHHHHHHH---HHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 2 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM---KLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~---~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
+++++|||||||.||+|.++|.++....... ...++++++|+++...+..+..+.+...+.++..|++++..++.
T Consensus 77 ~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 154 (422)
T TIGR02155 77 VVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGG-- 154 (422)
T ss_pred cEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCC--
Confidence 5788899999999999999999886654332 33468889998887766554444443356788889998876543
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhh--h---hhcccccccc-----------------cccccccchhc
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV--T---SLCRSMKLAC-----------------ELYPSRHIALC 136 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~--~---~~~~~~~ls~-----------------e~~~~yG~te~ 136 (316)
++..+++.++++++++++..|+++..+....... . ...+.+-.++ .+++.||+||+
T Consensus 155 --~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 155 --QTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred --CHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 4678999999999999999999887665433221 0 0111112222 27889999998
Q ss_pred cC-CCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC--CCcccCCCcCCCCceeeec--C
Q psy14342 137 LD-PYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV--SQYRVRDTFCSCNGALYQG--A 198 (316)
Q Consensus 137 ~~-~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~--~gY~~~~~~~~~d~g~~~~--g 198 (316)
+. ..+..+. ....|.+ ...++.. .++|++ |++.+. ..+- .-.--++|.|.+++ |
T Consensus 233 ~~~~~~~~~~------~~~~g~~-~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~~~~~p-~~ry~TGDl~~~~~~~G 304 (422)
T TIGR02155 233 IGPGVAMECV------ETQDGLH-IWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLTKEALP-VIRYRTRDLTRLLPGTA 304 (422)
T ss_pred cCCceeeccc------ccCCCce-EecCeeEEEEECCCCCCCCCCCCeeEEEEecCCccccc-eeeEEcCcEEEEECCCC
Confidence 42 1111110 0011110 0111223 444431 666655 1110 00011336666543 2
Q ss_pred --------cCCcccceeEECCcccChHhHHHHHHHhccccceeEEEee---C--CcEEEEEEecCCc------hhhcchH
Q psy14342 199 --------ERLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTW---T--NLLVVVVELDGNE------SEALDLV 259 (316)
Q Consensus 199 --------~~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~---~--~~~~~~v~~~~~~------~~~~~l~ 259 (316)
..||.||+|+++|.+|+|.|||++|.+ ||.|.+...+.. + +.+.+.+++.... .+.+.+.
T Consensus 305 r~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~-~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 383 (422)
T TIGR02155 305 RTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILK-MDELSPHYQLELTRNGHMDELTLKVELKPESYTLRLHEQASLLA 383 (422)
T ss_pred CcccccccccCccCCeEEECCEEECHHHHHHHHHh-CcCcCCCEEEEEEcCCCccEEEEEEEEecCcccccchHHHHHHH
Confidence 289999999999999999999999999 999984443433 2 3566666655321 1223456
Q ss_pred HHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHH
Q psy14342 260 PLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRM 296 (316)
Q Consensus 260 ~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~ 296 (316)
+++++.+.+..+... .+.++.++.||+|+ ||+.|.
T Consensus 384 ~~i~~~~~~~~~~~~-~v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 384 GEIQHTIKQEVGVSM-DVHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred HHHHHHHHhccCcEE-EEEEECCCCccCCC-CCceEE
Confidence 778888887767664 68888888999988 998763
No 122
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.91 E-value=1.7e-24 Score=199.36 Aligned_cols=204 Identities=18% Similarity=0.142 Sum_probs=147.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHH--HHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK--LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~--~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
++++++|||||||.||+|.++|+++...+..+. ..+++. |+++.++|++|.+|++..++.++..|+++++.++...
T Consensus 156 ~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~ 233 (417)
T PF00501_consen 156 DPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDL 233 (417)
T ss_dssp SEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHH
T ss_pred ceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccccccccccccccccc
Confidence 589999999999999999999999998877754 223333 6899999999999996669999999999999987654
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhh----hhh---cccccccc------------------cccccccc
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV----TSL---CRSMKLAC------------------ELYPSRHI 133 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~----~~~---~~~~~ls~------------------e~~~~yG~ 133 (316)
.++..|++.++++++++++++|+++..+....+.. ... .+.+-.++ .+.+.||+
T Consensus 234 -~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~ 312 (417)
T PF00501_consen 234 -FDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGS 312 (417)
T ss_dssp -HHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEE
T ss_pred -cccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceecccc
Confidence 34778999999999999999999998776522111 001 11122222 18889999
Q ss_pred hhccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEecC---CCcccCCCcC---------
Q psy14342 134 ALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSAV---SQYRVRDTFC--------- 188 (316)
Q Consensus 134 te~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~~---~gY~~~~~~~--------- 188 (316)
||++.......+. ......+..|.++||++ +++|++ |+++|+ .||+++++.+
T Consensus 313 tE~~~~~~~~~~~---~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~ 389 (417)
T PF00501_consen 313 TETGSIATIRPPE---DDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGW 389 (417)
T ss_dssp GGGSSEEEEEETT---THHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSE
T ss_pred cccceeeeccccc---ccccccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccccccc
Confidence 9998654311000 00112234556899999 888863 999999 8999975432
Q ss_pred --CCCceeee-cCc---CCcccceeEEC
Q psy14342 189 --SCNGALYQ-GAE---RLALDETIMLR 210 (316)
Q Consensus 189 --~~d~g~~~-~g~---~GR~dd~i~~~ 210 (316)
++|.|+++ +|. +||.||+||++
T Consensus 390 ~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 390 YRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred eecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 22666666 344 99999999974
No 123
>KOG3628|consensus
Probab=99.89 E-value=4.8e-21 Score=182.19 Aligned_cols=314 Identities=42% Similarity=0.671 Sum_probs=245.9
Q ss_pred eEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccC
Q psy14342 2 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVN 81 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~ 81 (316)
+||+-|.--++|.--+|.++|.++++.+........+.+...++.+.+++.+.|+..+.+..+++|.+.++.+|.++..+
T Consensus 945 ~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nn 1024 (1363)
T KOG3628|consen 945 PALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENN 1024 (1363)
T ss_pred eEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcC
Confidence 68888888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhccceeeEEecccchhhHHhhHHhhhhh--cccccccc------c------------------------ccc
Q psy14342 82 PALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVTSL--CRSMKLAC------E------------------------LYP 129 (316)
Q Consensus 82 ~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~~~--~~~~~ls~------e------------------------~~~ 129 (316)
|..|+..++++++..++.+...+.......+..... .++.++++ | +--
T Consensus 1025 psLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avSt 1104 (1363)
T KOG3628|consen 1025 PSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVST 1104 (1363)
T ss_pred HHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcc
Confidence 999999999999998888776665443332221110 12333322 1 111
Q ss_pred cccc----hhccCCCCCCCc-eEEE---------EeeeccC-cc-------cccCCCce-EEecCc------------eE
Q psy14342 130 SRHI----ALCLDPYCGLGF-ALWV---------LSSVYSG-HH-------SILIPPSE-VEVNPA------------LW 174 (316)
Q Consensus 130 ~yG~----te~~~~~~~~~~-~~~~---------~~~~~~g-~~-------~~~~~g~~-~i~d~~------------l~ 174 (316)
.|+. ..+..++.+.+| ..+. .+.++.| |+ |...++.+ .+++|+ ||
T Consensus 1105 sys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW 1184 (1363)
T KOG3628|consen 1105 SYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIW 1184 (1363)
T ss_pred cccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccccccccCCcceEE
Confidence 2221 122334555555 2222 2333333 33 34667888 888887 99
Q ss_pred EecC---CCcccCCCc--C-------------------CCCceeee-----cC--c-------CCcccceeEECCcccCh
Q psy14342 175 LSAV---SQYRVRDTF--C-------------------SCNGALYQ-----GA--E-------RLALDETIMLRGMRYHP 216 (316)
Q Consensus 175 v~~~---~gY~~~~~~--~-------------------~~d~g~~~-----~g--~-------~GR~dd~i~~~G~~v~p 216 (316)
+++. .+|++..+. + +++.||++ ++ . +|-.++.+-++|.+.+|
T Consensus 1185 ~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p 1264 (1363)
T KOG3628|consen 1185 VNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFP 1264 (1363)
T ss_pred eccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCc
Confidence 9988 566543111 1 11556652 11 1 89999999999999999
Q ss_pred HhHHHHHHHhccccceeEEEeeCCcEEEEEEecCCchhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHH
Q psy14342 217 IDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRM 296 (316)
Q Consensus 217 ~eIE~~l~~~~p~v~~~~v~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~ 296 (316)
.+||+.+.+.||.|.+|+||-.++.+++++++.. ++...+|.-.+.+.+.+++++...-+.||+...+|+++.|..+|.
T Consensus 1265 ~DIE~TV~~vH~~I~~cavF~~~glvVvviE~~g-q~~~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~ 1343 (1363)
T KOG3628|consen 1265 SDIETTVERVHPSIGGCAVFQATGLVVVVIECHG-QQELADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRA 1343 (1363)
T ss_pred chHHHHHHHhcccccceeeEeeCCeEEEEEEecC-chhHhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHH
Confidence 9999999999999999999999999999999987 556667888888888889999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcchhhccC
Q psy14342 297 HLRDGFLADQLDPIYVAYNM 316 (316)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~ 316 (316)
.+++.|.+|++++.|+.++|
T Consensus 1344 ~I~~~w~~~kL~~~~v~yi~ 1363 (1363)
T KOG3628|consen 1344 HILDSWLAGKLDPIYVFYIR 1363 (1363)
T ss_pred HHHHHHHhcccceeeeeecC
Confidence 99999999999999999886
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.88 E-value=1.1e-20 Score=175.12 Aligned_cols=276 Identities=15% Similarity=0.135 Sum_probs=161.1
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSE 77 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~ 77 (316)
+++.+.|||||||.||+|.+||.++...+....+. .+++++|+++.+.|..+..+.....+.++..|++++...
T Consensus 87 ~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~--- 163 (445)
T TIGR03335 87 DIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG--- 163 (445)
T ss_pred HeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC---
Confidence 35788999999999999999999987766554443 488899999999988887776554567788898776432
Q ss_pred cccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhcccccccc-----------------cccccccchh
Q psy14342 78 VEVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLAC-----------------ELYPSRHIAL 135 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~-----------------e~~~~yG~te 135 (316)
.+...++.+++++++++..+|+.+..+........ ...+.+-+++ .+++.||+||
T Consensus 164 ---~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE 240 (445)
T TIGR03335 164 ---KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTE 240 (445)
T ss_pred ---chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhh
Confidence 12345789999999998888877655443222110 0112222222 2778999999
Q ss_pred ccCCCCCCCceEEEEeeeccCcccccCCCce-EEecCc------------eEEec----------C-CCcccC-------
Q psy14342 136 CLDPYCGLGFALWVLSSVYSGHHSILIPPSE-VEVNPA------------LWLSA----------V-SQYRVR------- 184 (316)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~i~d~~------------l~v~~----------~-~gY~~~------- 184 (316)
++... . +....|.+ ++-+... .++|++ |++.+ | ..|...
T Consensus 241 ~~~~~--~-------c~~~~g~h-~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~~r~~~PliRYrtgD~~~~~~ 310 (445)
T TIGR03335 241 GTMCG--E-------CQAVAGLH-VPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPGERCGSLLINYDTEDTTVVIS 310 (445)
T ss_pred hhheE--E-------ecCCCCcc-ccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCCccCCceEEEeecCceEEEec
Confidence 74211 1 10011100 0111222 344433 22221 1 223221
Q ss_pred -CCcCCCCceeeecCcCCcccceeEECCcccChHhHHHHHHHhccccc---ee--EEE-eeC---CcEEEEEEecCCch-
Q psy14342 185 -DTFCSCNGALYQGAERLALDETIMLRGMRYHPIDIENSVMRAHKKIA---EC--AVF-TWT---NLLVVVVELDGNES- 253 (316)
Q Consensus 185 -~~~~~~d~g~~~~g~~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~---~~--~v~-~~~---~~~~~~v~~~~~~~- 253 (316)
++..|+.....-. ..||.||+++++|.+|+|.+||++|.+ ++++. .. +++ ..+ +.+.+.++..+...
T Consensus 311 ~~~C~CGr~~~r~~-~~gR~dd~~~~~g~~~~p~~ie~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~~~~~~~ 388 (445)
T TIGR03335 311 RDRCPCGRTHMRIL-NPEREAETIWISGVPFNRVDVERAVFQ-RENMDSLTGEYEAFLYGEEEGEITLRVSLECEDKDNC 388 (445)
T ss_pred CCCCCCCCCcceeC-CCcccCceEEECCEEeCHHHHHHHHhc-cCCCCCCCccEEEEEecCCCCCceEEEEEEecCcccc
Confidence 1111211111111 279999999999999999999999998 64433 21 222 221 24555566654321
Q ss_pred hhcchHHHHHHH----HHH------hcCeeecEEEEEcCCCcccC-CCchhhH
Q psy14342 254 EALDLVPLVTNA----VLE------EHHLIVGVAVVVDPGVVPIN-SRGEKQR 295 (316)
Q Consensus 254 ~~~~l~~~~~~~----l~~------~~~~~~~~~~~~~~~~lP~t-~~gKi~r 295 (316)
..+++.+.+.+. +.. ..++. -.+.++....||++ ..||..|
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 389 SIHDIQENFTGTFLKYKPELIGSYDEGIFQ-ILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcceEE-EEEEEeCCCCccccccCCCcee
Confidence 223444444443 221 22333 36788888899998 3699765
No 125
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=9e-19 Score=170.20 Aligned_cols=220 Identities=15% Similarity=0.144 Sum_probs=161.3
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
+.+|++|||||||.||||..+|+++..........+++...|+++...++.++.+.+. +|.++..|+++++..+.. ..
T Consensus 367 ~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~-~f~~l~~G~~l~~~~~~~-~~ 444 (642)
T COG1020 367 ALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFE-IFGALLEGARLVLAPALL-QV 444 (642)
T ss_pred CeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHH-HHHHHhCCCEEEecCccc-cC
Confidence 4799999999999999999999999887777777799999999999999988877776 899999999999987664 56
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh---h--hcccccccc-------------------cccccccchhc
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT---S--LCRSMKLAC-------------------ELYPSRHIALC 136 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~---~--~~~~~~ls~-------------------e~~~~yG~te~ 136 (316)
++..+.+.+.+++++++..+|..+..+........ . ..+.+..++ .+...||.||+
T Consensus 445 ~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~ 524 (642)
T COG1020 445 DPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEA 524 (642)
T ss_pred CHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHH
Confidence 78899999999999999877777665544311110 0 012222222 14667888885
Q ss_pred cCCCCCCCceEEEEeeec--cCcccccCCCce-EEecCc-----------eEEecC---CCcccCCCcCCC---------
Q psy14342 137 LDPYCGLGFALWVLSSVY--SGHHSILIPPSE-VEVNPA-----------LWLSAV---SQYRVRDTFCSC--------- 190 (316)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~--~g~~~~~~~g~~-~i~d~~-----------l~v~~~---~gY~~~~~~~~~--------- 190 (316)
........ ..... .-|.|.|+++.. .+.|.. +++.|. .|||++++.+..
T Consensus 525 ~~~~~~~~-----~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~ 599 (642)
T COG1020 525 TLDAPSFP-----ISAELESRVPIGRPVANTQLYILDQGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYR 599 (642)
T ss_pred hhheeeEE-----cccccCCCCCcceeeCCCeEEEECCCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCcc
Confidence 32211111 01111 124556788877 777732 788888 899999877643
Q ss_pred --Cceee-ecCc---CCcccceeEECCcccChHhHHHHHHHhcc
Q psy14342 191 --NGALY-QGAE---RLALDETIMLRGMRYHPIDIENSVMRAHK 228 (316)
Q Consensus 191 --d~g~~-~~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p 228 (316)
|.+++ .+|. .||.|+++|++|++|.+.|||..+.. +|
T Consensus 600 tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~-~~ 642 (642)
T COG1020 600 TGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAE-QP 642 (642)
T ss_pred CCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhc-CC
Confidence 33332 3343 99999999999999999999999987 65
No 126
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.77 E-value=1.4e-16 Score=142.57 Aligned_cols=272 Identities=15% Similarity=0.135 Sum_probs=169.3
Q ss_pred eEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 2 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
...|..||||||+|+-+.+|+..+...+..+++.| +...+|++..+.-..-..|.....+++-..|++++-..+
T Consensus 92 i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~--- 168 (438)
T COG1541 92 IVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG--- 168 (438)
T ss_pred eEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC---
Confidence 45688999999999999999998877777766655 567888887764421111222225667778888876654
Q ss_pred ccChHHHHHHHhccceeeEEecccchhhHHhhHHhhh-----hhccccccccc-----------------ccccccchhc
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT-----SLCRSMKLACE-----------------LYPSRHIALC 136 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~-----~~~~~~~ls~e-----------------~~~~yG~te~ 136 (316)
++..+.+.++.+++++++.++|+++..+....+... ...+..-+++| .++.||.||.
T Consensus 169 -g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~ 247 (438)
T COG1541 169 -GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEG 247 (438)
T ss_pred -ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeeccccccc
Confidence 356788999999999999999999887766554431 01122222322 7889999999
Q ss_pred cCCCCCCCceEEEEeeeccCcccccCCCce--EEecCc------------eEEecC-------CCcccCCCcCCCCceee
Q psy14342 137 LDPYCGLGFALWVLSSVYSGHHSILIPPSE--VEVNPA------------LWLSAV-------SQYRVRDTFCSCNGALY 195 (316)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~--~i~d~~------------l~v~~~-------~gY~~~~~~~~~d~g~~ 195 (316)
....+..++ ...|.+ ...... .++||+ |.+..- -.|.-+ |.+.+
T Consensus 248 ~g~g~~eC~-------~~~glh--i~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~~~~~PlIRYrtg------Dit~i 312 (438)
T COG1541 248 FGPGAGECT-------ERNGLH--IWEDHFIFEIVDPETGEQLPDGERGELVITTLTKEGMPLIRYRTG------DITVI 312 (438)
T ss_pred cCCcccccc-------cccCCC--cchhhceeeeecCCcCccCCCCCeeEEEEEeccccCcceEEEEcC------CeeEe
Confidence 544322221 111210 111111 344433 111110 233322 22222
Q ss_pred ec-------------CcCCcccceeEECCcccChHhHHHHHHHhccccc---eeEEEee--CCcEEEEEEecCCchhh--
Q psy14342 196 QG-------------AERLALDETIMLRGMRYHPIDIENSVMRAHKKIA---ECAVFTW--TNLLVVVVELDGNESEA-- 255 (316)
Q Consensus 196 ~~-------------g~~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~---~~~v~~~--~~~~~~~v~~~~~~~~~-- 255 (316)
.+ ...||.||+++..|.+|+|..||++|.+ .+.+. +..+-.. .+.+.+.+++.+...+.
T Consensus 313 ~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~-~~~~~~~yqi~~~~~~~~d~L~V~vE~~~~~~~~~~ 391 (438)
T COG1541 313 LSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQ-IPEVTPHYQIILTRNGGLDELTVRVELENEAEELED 391 (438)
T ss_pred cccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhc-ccCCCceEEEEEecCCCCceEEEEEEecCcccchHH
Confidence 11 1299999999999999999999999999 99998 3333331 24678888887542111
Q ss_pred -cchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhH
Q psy14342 256 -LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQR 295 (316)
Q Consensus 256 -~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r 295 (316)
..+...+...+....... ..+.++.+..+|+|. ||..|
T Consensus 392 ~~~~~~~l~~~~~~~~~~~-~~v~~v~~g~l~r~~-~K~kr 430 (438)
T COG1541 392 ERRLAKKLIKNIKSELGVR-VEVELVEPGELPRTE-GKAKR 430 (438)
T ss_pred HHHHHHHHHHHHHhhcCCc-eEEEEEeccceeccc-CceeE
Confidence 223345555555444444 368899989999987 46543
No 127
>KOG1178|consensus
Probab=99.72 E-value=5.2e-17 Score=158.60 Aligned_cols=293 Identities=16% Similarity=0.125 Sum_probs=168.6
Q ss_pred eEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecC-C-cCChhhhHHHHhhhhcCceeeeeCCcccc
Q psy14342 2 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLD-P-YCGLGFALWVLSSVYSGHHSILIPPSEVE 79 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p-~-~h~~g~~~~~~~~l~~G~~~v~~~~~~~~ 79 (316)
.+++.||||+||.||+|.-+|..+....+.....|++...+++ ...+ . .|+.-.. ++.+++.....++.+.....
T Consensus 198 ~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~-~~~~~~~~~d~i~~--~~~~~L~~~~~l~~p~~~~~ 274 (1032)
T KOG1178|consen 198 TALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRF-TFKTSVYFDDTIQK--FIGALLFNGNNLLVPTATIK 274 (1032)
T ss_pred cceEeecccccccccccchhHHHHHhhhhhccccCCcCccchh-hhhheeecccchHH--HHhhHhhcCceeecccccCc
Confidence 5788999999999999999999999988888888888877765 3322 1 2222222 33444444434444333335
Q ss_pred cChHHHHHHHhccceeeEEecccchhhHHhhHHhh-hhh---------------ccccccccc--ccccccchhccCC--
Q psy14342 80 VNPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAV-TSL---------------CRSMKLACE--LYPSRHIALCLDP-- 139 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~-~~~---------------~~~~~ls~e--~~~~yG~te~~~~-- 139 (316)
.+|..|.+.++++..++.+.+|+++..+....... +.. ++...++.| +.+.|+.++....
T Consensus 275 ~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~ 354 (1032)
T KOG1178|consen 275 DTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEI 354 (1032)
T ss_pred cchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccce
Confidence 56899999999999999999999876544332221 000 000111111 3333432221100
Q ss_pred -----CCCCCceEEE------EeeeccCcccccCCCce-EEec-------------------------Cc-----eEEec
Q psy14342 140 -----YCGLGFALWV------LSSVYSGHHSILIPPSE-VEVN-------------------------PA-----LWLSA 177 (316)
Q Consensus 140 -----~~~~~~~~~~------~~~~~~g~~~~~~~g~~-~i~d-------------------------~~-----l~v~~ 177 (316)
+...++.... ..........+...+.. .+++ ++ ....|
T Consensus 355 ~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~g 434 (1032)
T KOG1178|consen 355 FFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGVGKGCLGAEQNLSSWVVDG 434 (1032)
T ss_pred eeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeeeccCcccCCcccceeecccccccceeecc
Confidence 1111110000 00000000000000000 1000 00 11111
Q ss_pred -C--------CCcccCCCcC---CCCceee-ecCc---CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC--
Q psy14342 178 -V--------SQYRVRDTFC---SCNGALY-QGAE---RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-- 239 (316)
Q Consensus 178 -~--------~gY~~~~~~~---~~d~g~~-~~g~---~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-- 239 (316)
. .-||....+- +.|.|.. .+|+ .||.|++||.+|.++...||+.++.+ ||.|.++.++...
T Consensus 435 ~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~-~p~v~~~itl~~~~~ 513 (1032)
T KOG1178|consen 435 YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEV-HPDVKEAITLARENS 513 (1032)
T ss_pred ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhcc-Ccchhhhheeeeecc
Confidence 0 1122222211 1145533 4444 99999999999999999999999999 9999999999883
Q ss_pred ---CcEEEEEEecCCchhhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHH
Q psy14342 240 ---NLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRD 300 (316)
Q Consensus 240 ---~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~ 300 (316)
+++.+++....... ..+...+++++..+......+..+|..+++|+|++||+|+++|.+
T Consensus 514 ~~~~~l~aFvv~~~~~~--~~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~ 575 (1032)
T KOG1178|consen 514 TVGQTLLAFVVERGGSK--SVLIRDIRNYLKKELASYMLPSLVVPLAKVPLNPNGKVDKKALLE 575 (1032)
T ss_pred ccCceEEEEEeccCCCC--chhHHHHHHhhcccccceecceEEEEhhhCCcCCCCCcChhhhhh
Confidence 34666665554332 234666777777665554455567777799999999999999998
No 128
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.42 E-value=8.2e-13 Score=118.20 Aligned_cols=103 Identities=14% Similarity=0.064 Sum_probs=80.8
Q ss_pred CCCceeee--cCc---CCcccceeEECC---cccChHhHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhh
Q psy14342 189 SCNGALYQ--GAE---RLALDETIMLRG---MRYHPIDIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEA 255 (316)
Q Consensus 189 ~~d~g~~~--~g~---~GR~dd~i~~~G---~~v~p~eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~ 255 (316)
++|.|+++ +|. +||.| +| +||+|. ||++|.+ ||+|.+|+|+++. +.+++++++.. ..+.
T Consensus 213 TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~-hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~-~~~~ 284 (365)
T PRK09188 213 TGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKS-DPAVSDVAIALFSLPAKGVGLYAFVEAEL-PADE 284 (365)
T ss_pred CCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHh-CCCccEEEEEEEEcCCCCeEEEEEEEECC-CCCH
Confidence 44777762 343 89987 78 799999 9999999 9999999999983 46777776553 2344
Q ss_pred cchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHc
Q psy14342 256 LDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLA 304 (316)
Q Consensus 256 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~ 304 (316)
+++.+++++.+. . +.| ..+.+++ +||+|++||++|++|++....
T Consensus 285 ~el~~~l~~~L~-~-kvP-~~v~~v~--~lP~t~~GKi~R~~Lr~~~~~ 328 (365)
T PRK09188 285 KSLRARLAGAKP-P-KPP-EHIQPVA--ALPRDADGTVRDDILRLIAMN 328 (365)
T ss_pred HHHHHHHHhhch-h-cCC-cEEEEEC--CCCCCCCCCccHHHHHHHhhc
Confidence 688889998888 4 554 5677776 899999999999999987643
No 129
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.08 E-value=3e-10 Score=95.92 Aligned_cols=77 Identities=18% Similarity=0.104 Sum_probs=66.5
Q ss_pred CeEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 1 MLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 1 ~~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
|++.|+||||+ +|+++..+. ..++++++|+++ .+|++|.+|+...++.++..|+++++.+..
T Consensus 151 D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~rF---- 212 (227)
T TIGR03089 151 APALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTHP---- 212 (227)
T ss_pred cceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecCC----
Confidence 68999999986 677766654 567889999999 999999999988899999999999998532
Q ss_pred ChHHHHHHHhcccee
Q psy14342 81 NPALWLSAVSQYRVR 95 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t 95 (316)
+|..+++.++++++|
T Consensus 213 d~~~~l~~i~~~~vT 227 (227)
T TIGR03089 213 DPARLDQIAETERVT 227 (227)
T ss_pred CHHHHHHHHHhhcCC
Confidence 789999999999986
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.00 E-value=1.5e-07 Score=86.46 Aligned_cols=255 Identities=13% Similarity=0.055 Sum_probs=129.7
Q ss_pred EEEeccCCCCCceEEEEeHHHHHHHHHH---HHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 4 YLDFSVSTTGMLAGIKMSHAAVTSLCRS---MKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 4 ~i~~TSGTTG~PK~V~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
.+..||||||.|-.+..+.......... ...+.++..++++...+.- .+ .++.++... .+-++..++..
T Consensus 103 ~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~---~~---~ly~~~~~~--~~~~~~~~l~~ 174 (430)
T TIGR02304 103 SVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRA---DN---NLYQSVNNR--WISLDFFDLLA 174 (430)
T ss_pred EEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEcc---Ch---hHHHHHHhc--cceeeecCCCc
Confidence 5667999999999999999854333222 1222355566666554311 11 123332221 12122223334
Q ss_pred ChHHHHHHHhccceeeEEecccchhhHHhhHHhhh--hhccccccccc-----------------ccccccchhccCCCC
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGMLAGIKMSHAAVT--SLCRSMKLACE-----------------LYPSRHIALCLDPYC 141 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~~~~~--~~~~~~~ls~e-----------------~~~~yG~te~~~~~~ 141 (316)
+...+++.+.+++++++.+.|+.+..|........ ...+.+-.++| +++.||.|| +. .+
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~-la 252 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GF-LA 252 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hh-eE
Confidence 56789999999999999999998887665433211 11122222221 778899999 32 21
Q ss_pred CCCceEEEEeeeccCcccccCCC---ce-EEecCc----eEEecC-------CCcccC-------CCcCCCCceeeecCc
Q psy14342 142 GLGFALWVLSSVYSGHHSILIPP---SE-VEVNPA----LWLSAV-------SQYRVR-------DTFCSCNGALYQGAE 199 (316)
Q Consensus 142 ~~~~~~~~~~~~~~g~~~~~~~g---~~-~i~d~~----l~v~~~-------~gY~~~-------~~~~~~d~g~~~~g~ 199 (316)
..+. .|.. ...+. +| .++|++ ..+.+- -.|..+ .+..|+.....-+..
T Consensus 253 ~eC~---------~g~l-Hl~ed~~~vE~~ivD~~~~~~~ViT~L~n~~~PlIRYrtGD~~~~~~~~C~CGr~~~~i~~I 322 (430)
T TIGR02304 253 STCR---------CGTL-HLNEDLVHIEKQYLDEHKRFVPIITDFTRTTQPIVRYRLNDILVESEQPCSCGSATMAIERI 322 (430)
T ss_pred EecC---------CCCE-EEccccEEEEeeEECCCCceEEEEecCCCccceEEeeeCCCEEEeCCCCCCCCCcccccCCc
Confidence 1111 1100 01111 11 134443 111111 223221 111122211112234
Q ss_pred CCcccceeEE---CCcc--cChHhHHHHHHHhccccceeEEEee-CCcEEEEEEecCCchhhcchHHHHHHHHHHhcCee
Q psy14342 200 RLALDETIML---RGMR--YHPIDIENSVMRAHKKIAECAVFTW-TNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLI 273 (316)
Q Consensus 200 ~GR~dd~i~~---~G~~--v~p~eIE~~l~~~~p~v~~~~v~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~ 273 (316)
.||.||+++. +|.. |+|..++.+|....+.|.+.-++-. .+++.+.++... ...+.+.+...+.+....+..
T Consensus 323 ~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~~~~l~v~~~~~~--~~~~~~~~~~~~~l~~~~~~~ 400 (430)
T TIGR02304 323 EGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTGSAQLELIADCEL--EMLEHCRSKALNALFTRQDIA 400 (430)
T ss_pred cCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEccCCeEEEEEEeCh--HHHHHHHHHHHHHHHHHcCCC
Confidence 8999999985 4544 5999999986653788887655533 355665555431 122334422333444455554
Q ss_pred ecEEEEE
Q psy14342 274 VGVAVVV 280 (316)
Q Consensus 274 ~~~~~~~ 280 (316)
...+.+.
T Consensus 401 ~~~~~~~ 407 (430)
T TIGR02304 401 VGQIIWS 407 (430)
T ss_pred cceEEEE
Confidence 3455555
No 131
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.97 E-value=1e-09 Score=75.27 Aligned_cols=67 Identities=21% Similarity=0.238 Sum_probs=51.9
Q ss_pred hHHHHHHHhccccceeEEEeeC-----CcEEEEEEecCCchhhcchHHHHHHHHHHhcCeeecEEEEEcCCC-cccCCCc
Q psy14342 218 DIENSVMRAHKKIAECAVFTWT-----NLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIVGVAVVVDPGV-VPINSRG 291 (316)
Q Consensus 218 eIE~~l~~~~p~v~~~~v~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-lP~t~~g 291 (316)
|||++|.+ ||+|.+|+|++.. +.+++++++ +.+++.+++++++. .+..| ..+.++..++ ||+|++|
T Consensus 1 EIE~~l~~-~~~V~~~~V~~~~d~~~g~~l~a~vv~-----~~~~i~~~~~~~l~-~~~~P-~~~~~v~~~~~lP~t~~G 72 (73)
T PF13193_consen 1 EIESVLRQ-HPGVAEAAVVGVPDEDWGERLVAFVVL-----DEEEIRDHLRDKLP-PYMVP-RRIRFVRLDEELPRTPSG 72 (73)
T ss_dssp HHHHHHHT-STTEEEEEEEEEEETTTEEEEEEEEEE-----HHHHHHHHHHHHS--GGGS--SEEEEEEESSSEEBETTS
T ss_pred CHHHHHhc-CCCccEEEEEEEEcccccccceeEEEe-----eecccccchhhhCC-Cccee-eEEEEccccCcCCCCCCC
Confidence 89999999 9999999999994 367777766 33788888888877 55555 3477775556 9999999
Q ss_pred h
Q psy14342 292 E 292 (316)
Q Consensus 292 K 292 (316)
|
T Consensus 73 K 73 (73)
T PF13193_consen 73 K 73 (73)
T ss_dssp S
T ss_pred C
Confidence 8
No 132
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=98.55 E-value=2.4e-07 Score=66.95 Aligned_cols=82 Identities=22% Similarity=0.278 Sum_probs=58.6
Q ss_pred CcccChHhHHHHHHHhccccceeEEEee---C--CcEEEEEEecCCch----hhcchHHHHHHHHHHhcCeeecEEEEEc
Q psy14342 211 GMRYHPIDIENSVMRAHKKIAECAVFTW---T--NLLVVVVELDGNES----EALDLVPLVTNAVLEEHHLIVGVAVVVD 281 (316)
Q Consensus 211 G~~v~p~eIE~~l~~~~p~v~~~~v~~~---~--~~~~~~v~~~~~~~----~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 281 (316)
|.||+|.+||++|.+ +|++....-+.+ + +.+.+.+++.+... +.+++.+.+++.+.+..++.+ .+.+++
T Consensus 1 GvnvfP~~Ie~vl~~-~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~~-~V~lv~ 78 (96)
T PF14535_consen 1 GVNVFPSQIEEVLRE-FPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVRP-EVELVP 78 (96)
T ss_dssp TEEE-HHHHHHHHCT-STTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS-E-EEEEE-
T ss_pred CcEECHHHHHHHHHh-CcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCceE-EEEEEC
Confidence 789999999999999 999985333333 2 46888888887543 346788889999998888876 899999
Q ss_pred CCCcccCCCchhhH
Q psy14342 282 PGVVPINSRGEKQR 295 (316)
Q Consensus 282 ~~~lP~t~~gKi~r 295 (316)
+.+||++ .||..|
T Consensus 79 ~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 79 PGTLPRS-EGKAKR 91 (96)
T ss_dssp TT-S----SSSS-S
T ss_pred CCCccCC-CCcceE
Confidence 9999997 588765
No 133
>KOG3628|consensus
Probab=98.54 E-value=4e-06 Score=82.02 Aligned_cols=311 Identities=21% Similarity=0.272 Sum_probs=183.2
Q ss_pred eEEEEeccCCCCCceEEEEeHHHHHHHHHH---------------H-----HHHhcCCCCCceEEecCCcCChhhhHHHH
Q psy14342 2 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRS---------------M-----KLACELYPSRHIALCLDPYCGLGFALWVL 61 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~---------------~-----~~~~~~~~~d~~l~~~p~~h~~g~~~~~~ 61 (316)
..||-||++++|.--|++.+|. +..+.+. + ...+++...+.++..+...--.|++++++
T Consensus 252 ~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~ 330 (1363)
T KOG3628|consen 252 YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVL 330 (1363)
T ss_pred eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhh
Confidence 3689999999999999999998 4332221 1 11234555677777788888889999999
Q ss_pred hhhhcCceeeeeCCcccccChHHHHHHHhccceeeEEecccchh----hHHhhHH-hhh-hhcccccccc----------
Q psy14342 62 SSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGMLA----GIKMSHA-AVT-SLCRSMKLAC---------- 125 (316)
Q Consensus 62 ~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~----~l~~~~~-~~~-~~~~~~~ls~---------- 125 (316)
.++++|.+.+..+ ..+...|..|..++-++|.+.++.-...+. .+...+. ... ......++++
T Consensus 331 ~alfsg~c~i~~p-~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~ 409 (1363)
T KOG3628|consen 331 VALFSGYCTIGCP-KEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVTCTA 409 (1363)
T ss_pred hhhhcCceeecCc-hhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeeeEEeeee
Confidence 9999999888765 446678899999999999997665422221 2222111 111 0112344544
Q ss_pred ---c---------------------------ccccc-------cchhccC-------CCCCCCc-eEEE------Eeee-
Q psy14342 126 ---E---------------------------LYPSR-------HIALCLD-------PYCGLGF-ALWV------LSSV- 153 (316)
Q Consensus 126 ---e---------------------------~~~~y-------G~te~~~-------~~~~~~~-~~~~------~~~~- 153 (316)
| +.... +++|.+. ....+++ +... .+.+
T Consensus 410 vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~ 489 (1363)
T KOG3628|consen 410 VDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVE 489 (1363)
T ss_pred cchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEE
Confidence 0 00001 1122221 0111111 1111 0000
Q ss_pred ---c-------cCcccccCCCce--EEecCc------------eEEecC---CCcccCCCcCCC----------------
Q psy14342 154 ---Y-------SGHHSILIPPSE--VEVNPA------------LWLSAV---SQYRVRDTFCSC---------------- 190 (316)
Q Consensus 154 ---~-------~g~~~~~~~g~~--~i~d~~------------l~v~~~---~gY~~~~~~~~~---------------- 190 (316)
. ....+...||-. .+++|+ |||.++ +.||.-+..+..
T Consensus 490 v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n 569 (1363)
T KOG3628|consen 490 VDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSN 569 (1363)
T ss_pred EcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCcc
Confidence 0 000111334432 445554 999999 778765544432
Q ss_pred -------CceeeecCc---CCccccee-EECCcccChHhHHH---------HHHHhccccceeEEEeeCCcEEEEEEecC
Q psy14342 191 -------NGALYQGAE---RLALDETI-MLRGMRYHPIDIEN---------SVMRAHKKIAECAVFTWTNLLVVVVELDG 250 (316)
Q Consensus 191 -------d~g~~~~g~---~GR~dd~i-~~~G~~v~p~eIE~---------~l~~~~p~v~~~~v~~~~~~~~~~v~~~~ 250 (316)
=.||+++|. +|-.+|.+ ...|......+|-. .+.+--+.|=++.+|. .|+++++++=.+
T Consensus 570 ~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~-~E~~~Vv~~esP 648 (1363)
T KOG3628|consen 570 VPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE-DEHIVVVVLESP 648 (1363)
T ss_pred chhhhhcceeeeeCCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee-cceEEEEEEeCc
Confidence 256777765 44444444 35666655544432 2222134444455555 566666554444
Q ss_pred Cch--hhcchHHHHHHHHHHhcCeeecEEEEEcCCCcccCCCchhhHHHHHHHHHcCCCCcchhhcc
Q psy14342 251 NES--EALDLVPLVTNAVLEEHHLIVGVAVVVDPGVVPINSRGEKQRMHLRDGFLADQLDPIYVAYN 315 (316)
Q Consensus 251 ~~~--~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lP~t~~gKi~r~~l~~~~~~~~~~~~~~~~~ 315 (316)
... +..+....+-+.+..-++.-++=+.+++.++||||+.|=|.-.+++++|.+|.+.+.|.++.
T Consensus 649 ~a~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~~F~~G~L~~~~v~f~ 715 (1363)
T KOG3628|consen 649 DATEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQAFLEGSLPPSYVLFC 715 (1363)
T ss_pred chhhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccccHHHHHHHHcCCCCcceeeee
Confidence 332 22344555656666677777777899999999999998899999999999999999987764
No 134
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=95.20 E-value=0.51 Score=42.76 Aligned_cols=35 Identities=17% Similarity=0.060 Sum_probs=23.6
Q ss_pred eEEEEeccCCCCCceEEEEeHHHHHHHHHHHHHHh
Q psy14342 2 LAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLAC 36 (316)
Q Consensus 2 ~a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~~ 36 (316)
+..++-||||||.|--+.+.+..+.....++...+
T Consensus 91 ~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~ 125 (365)
T PF04443_consen 91 VEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIF 125 (365)
T ss_pred heeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHH
Confidence 34678899999998777777666655544444433
No 135
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=80.94 E-value=10 Score=30.41 Aligned_cols=55 Identities=22% Similarity=0.171 Sum_probs=43.0
Q ss_pred ChHhHHHHHHHhccccceeEEEeeCCcEEEEEEecCCchhhcchHHHHHHHHHHhc
Q psy14342 215 HPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEH 270 (316)
Q Consensus 215 ~p~eIE~~l~~~~p~v~~~~v~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~ 270 (316)
-..+|++.+.+ .|+|.+|.|+..++.+.+.+.+.......+++.+.+.+.+.+..
T Consensus 76 ~a~~i~~~v~~-~~~V~~A~vvv~~~~a~Vav~~~~~~~~~~~i~~~V~~~v~~~~ 130 (177)
T PF09580_consen 76 LADRIANRVKK-VPGVEDATVVVTDDNAYVAVDLDFNRFNTKKIKKKVEKAVKSAD 130 (177)
T ss_pred HHHHHHHHHhc-CCCceEEEEEEECCEEEEEEEecccccchhHHHHHHHHHHHHhC
Confidence 45678888888 99999999999999888888777433444678888888888544
No 136
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=76.83 E-value=2.1 Score=40.92 Aligned_cols=67 Identities=16% Similarity=0.209 Sum_probs=41.5
Q ss_pred CCcccceeEECCcccChHhHHHHHHHh----ccccceeEEEee-----CCcEEEEEEecCCchhhcchHHHHHHHH
Q psy14342 200 RLALDETIMLRGMRYHPIDIENSVMRA----HKKIAECAVFTW-----TNLLVVVVELDGNESEALDLVPLVTNAV 266 (316)
Q Consensus 200 ~GR~dd~i~~~G~~v~p~eIE~~l~~~----~p~v~~~~v~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~~~l 266 (316)
+||.+.++++.|+|++-.+|+++|.++ .-.+.+..+... +.+-++++++.....+.+.+.+.+.+.|
T Consensus 392 ~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~~~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 392 VGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGEPDDLEELAKALDESL 467 (528)
T ss_dssp EEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-HHHHHHHHHHHHHCS
T ss_pred eccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCCchHHHHHHHHHHHHh
Confidence 999999999999999999999999994 133344444433 2356777777766433444444444333
No 137
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=71.71 E-value=28 Score=31.72 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=57.0
Q ss_pred EEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
-.+|...+...+..+.. ..+++.+|++..+.+-. ..++..++..+..|+..+..+|.. ....+..++++.++
T Consensus 20 ~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~--~~~~~~~~A~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~ 94 (417)
T PF00501_consen 20 RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNS--IEFVVAFLACLRAGAIPVPLDPSL---SEDELRHILRQSGP 94 (417)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSS--HHHHHHHHHHHHTT-EEEEEETTS---SHHHHHHHHHHHTE
T ss_pred EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcc--ceeeeeeccccccccccccccccc---ccccccccccccce
Confidence 36888888776655444 45778899988887754 355666888999999999987653 45677889999999
Q ss_pred eeEEe
Q psy14342 95 RDTFC 99 (316)
Q Consensus 95 t~~~~ 99 (316)
.++++
T Consensus 95 ~~ii~ 99 (417)
T PF00501_consen 95 KVIIT 99 (417)
T ss_dssp SEEEE
T ss_pred eEEEE
Confidence 98775
No 138
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=69.20 E-value=71 Score=31.46 Aligned_cols=79 Identities=8% Similarity=0.043 Sum_probs=60.6
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.|...+..+... .++.++|++...+|.. ..++..++..+..|+..+.+.+.. .+..+...+++.++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~--~e~~~~~lA~~~~Gav~vpl~~~~---~~~~l~~~l~~~~~ 165 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANT--LEPLIAMLSCARIGATHCVLFDGY---SVKSLIDRIETITP 165 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--HHHHHHHHHHHHhCcEEEeeCCCC---CHHHHHHHHHhcCC
Confidence 578999887776655543 5899999999998864 456666788999999988876653 56788889999998
Q ss_pred eeEEecc
Q psy14342 95 RDTFCSY 101 (316)
Q Consensus 95 t~~~~~~ 101 (316)
.++++..
T Consensus 166 ~~li~~~ 172 (647)
T PTZ00237 166 KLIITTN 172 (647)
T ss_pred CEEEEcc
Confidence 8777653
No 139
>PRK09274 peptide synthase; Provisional
Probab=67.35 E-value=49 Score=31.58 Aligned_cols=78 Identities=12% Similarity=0.123 Sum_probs=56.6
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+... .++.++|++..+++-. ..++..++..+..|+..+..++.. .+..+...+++.++
T Consensus 40 ~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~--~~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~ 114 (552)
T PRK09274 40 DELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPS--LEFFALTFALFKAGAVPVLVDPGM---GIKNLKQCLAEAQP 114 (552)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCc--HHHHHHHHHHHHcCeEEEEcCCCc---cHHHHHHHHHhcCC
Confidence 368888887776665554 4688999999987753 456666788999999999887653 45566777888887
Q ss_pred eeEEec
Q psy14342 95 RDTFCS 100 (316)
Q Consensus 95 t~~~~~ 100 (316)
..++..
T Consensus 115 ~~~i~~ 120 (552)
T PRK09274 115 DAFIGI 120 (552)
T ss_pred CEEEec
Confidence 766543
No 140
>PLN03102 acyl-activating enzyme; Provisional
Probab=67.06 E-value=52 Score=31.79 Aligned_cols=80 Identities=5% Similarity=0.030 Sum_probs=60.4
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.|...+..+... +++.++|++..++|- ...++..+|..+..|+.++..++.. .+..+...+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n--~~e~~~~~la~~~~G~~~vpl~~~~---~~~~l~~~l~~~~~~ 113 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPN--TPAMYEMHFAVPMAGAVLNPINTRL---DATSIAAILRHAKPK 113 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--cHHHHHHHHHHHhcCcEEeeccccC---CHHHHHHHHhccCCe
Confidence 47888887766655554 478899999998874 4466666889999999988887653 577888899999998
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
.+++....
T Consensus 114 ~ii~~~~~ 121 (579)
T PLN03102 114 ILFVDRSF 121 (579)
T ss_pred EEEEChhh
Confidence 77765443
No 141
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=66.67 E-value=56 Score=30.82 Aligned_cols=81 Identities=11% Similarity=-0.032 Sum_probs=60.2
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++..+.+-.. .++..++..+..|+.++..++.. .+..+...+++.++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~ 111 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCP--EFIFCWFGLAKIGAIMVPINARL---LREESAWILQNSQAS 111 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCeEEEEcCccc---CHHHHHHHHHhcCce
Confidence 47888777666655543 57889999999877544 55555788999999998887653 567788899999999
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.++..+...
T Consensus 112 ~l~~~~~~~ 120 (517)
T PRK08008 112 LLVTSAQFY 120 (517)
T ss_pred EEEEecchh
Confidence 877766543
No 142
>PRK07788 acyl-CoA synthetase; Validated
Probab=66.31 E-value=46 Score=31.78 Aligned_cols=81 Identities=11% Similarity=0.098 Sum_probs=60.4
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+...+ ++.++|++...++- ...++..++..+..|+.++..++.. .+..+...+++.++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n--~~~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~ 148 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARN--HRGFVLALYAAGKVGARIILLNTGF---SGPQLAEVAAREGVK 148 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHhcCCEEEEeCCCC---CHHHHHHHHHhcCCc
Confidence 588888877666555543 67889999888653 4466666789999999999887653 466788899999998
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.+++.....
T Consensus 149 ~ii~~~~~~ 157 (549)
T PRK07788 149 ALVYDDEFT 157 (549)
T ss_pred EEEECchhH
Confidence 777665443
No 143
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=65.31 E-value=8.1 Score=37.49 Aligned_cols=27 Identities=11% Similarity=0.074 Sum_probs=25.4
Q ss_pred CCcccceeEECCcccChHhHHHHHHHh
Q psy14342 200 RLALDETIMLRGMRYHPIDIENSVMRA 226 (316)
Q Consensus 200 ~GR~dd~i~~~G~~v~p~eIE~~l~~~ 226 (316)
++|.+.+..+.|+|..-.++-+++.++
T Consensus 438 v~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 438 VQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EecCCceeecccccCCHHHHHHHHHHH
Confidence 999999999999999999999999884
No 144
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=65.00 E-value=50 Score=31.50 Aligned_cols=82 Identities=9% Similarity=0.001 Sum_probs=59.4
Q ss_pred ceEEEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhc
Q psy14342 15 LAGIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQ 91 (316)
Q Consensus 15 PK~V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~ 91 (316)
++...+|...+...+..+... .++.++|++...++-.. .++..++..+..|+..+...+.. .+..+...++.
T Consensus 51 ~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~--e~~~~~la~~~~G~~~vpl~~~~---~~~~l~~~l~~ 125 (547)
T PRK13295 51 GAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWW--EFTVLYLACSRIGAVLNPLMPIF---RERELSFMLKH 125 (547)
T ss_pred cccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh--HHHHHHHHHHhcCcEEecccccc---CHHHHHHHHHh
Confidence 334578998887766655554 47889999998877544 55555789999999988776652 46677788888
Q ss_pred cceeeEEecc
Q psy14342 92 YRVRDTFCSY 101 (316)
Q Consensus 92 ~~~t~~~~~~ 101 (316)
.++..+++..
T Consensus 126 ~~~~~li~~~ 135 (547)
T PRK13295 126 AESKVLVVPK 135 (547)
T ss_pred cCceEEEEec
Confidence 8888766544
No 145
>PLN02654 acetate-CoA ligase
Probab=64.83 E-value=96 Score=30.67 Aligned_cols=80 Identities=4% Similarity=0.038 Sum_probs=60.8
Q ss_pred EEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.|...+..+.. ..++.++|++...+|.. ..++..++..+..|+..+.+.+.. .+..+...+++.++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~--~e~v~a~lA~~~~Gav~vpv~~~~---~~~~l~~~l~~~~~ 193 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPML--MELPIAMLACARIGAVHSVVFAGF---SAESLAQRIVDCKP 193 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCCEEEecCCCC---CHHHHHHHHHhcCc
Confidence 46889988776655544 45788999999998753 466666888999999988876552 46788889999999
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
.++++...
T Consensus 194 ~~li~~~~ 201 (666)
T PLN02654 194 KVVITCNA 201 (666)
T ss_pred eEEEEcCc
Confidence 88776544
No 146
>PLN03052 acetate--CoA ligase; Provisional
Probab=64.48 E-value=97 Score=31.10 Aligned_cols=80 Identities=14% Similarity=0.106 Sum_probs=59.9
Q ss_pred EEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.|...+..+.. ..++.++|++...+|.. ...+..++..+..|+..+.+.+.. .+..+...+++.++
T Consensus 207 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~--~e~via~LA~~~~Gav~vpi~p~~---~~~~l~~rl~~~~~ 281 (728)
T PLN03052 207 NRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMN--VHAVIIYLAIILAGCVVVSIADSF---APSEIATRLKISKA 281 (728)
T ss_pred EEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC--HHHHHHHHHHHHcCCEEEeeCCCC---CHHHHHHHHHhcCc
Confidence 46889888776655544 35788999999998853 355666788999999988887653 46778888888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
.++++...
T Consensus 282 k~lit~d~ 289 (728)
T PLN03052 282 KAIFTQDV 289 (728)
T ss_pred eEEEEcCc
Confidence 87776543
No 147
>PLN02736 long-chain acyl-CoA synthetase
Probab=64.38 E-value=47 Score=32.65 Aligned_cols=82 Identities=11% Similarity=0.011 Sum_probs=60.8
Q ss_pred EEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+.. ..++.++|++..+++-. ..++...+..+..|+.++...+.. .+.....++++.++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~--~e~~~~~lA~~~~G~v~vpl~~~~---~~~~l~~il~~~~~ 151 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINR--PEWLIVDHACSAYSYVSVPLYDTL---GPDAVKFIVNHAEV 151 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCCeEEEeecCC---CHHHHHHHHhccCC
Confidence 45799888777665554 35788999998887643 356565788889999998776542 56778889999999
Q ss_pred eeEEecccch
Q psy14342 95 RDTFCSYGML 104 (316)
Q Consensus 95 t~~~~~~~~~ 104 (316)
.++++....+
T Consensus 152 ~~l~~~~~~~ 161 (651)
T PLN02736 152 AAIFCVPQTL 161 (651)
T ss_pred CEEEECHHHH
Confidence 9887765443
No 148
>PLN02246 4-coumarate--CoA ligase
Probab=64.02 E-value=56 Score=31.09 Aligned_cols=81 Identities=16% Similarity=0.077 Sum_probs=58.9
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
-.+|+..+...+..+... .++.++|++....+-. ..++..++..+..|+..+..++.. .+..+...++..++
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~ 123 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNC--PEFVLAFLGASRRGAVTTTANPFY---TPAEIAKQAKASGA 123 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC--hHHHHHHHHHHHcCEEEecCCCCC---CHHHHHHHHHhcCC
Confidence 368898887766655554 4788999998887643 466666788899999999887653 45677788888888
Q ss_pred eeEEecccc
Q psy14342 95 RDTFCSYGM 103 (316)
Q Consensus 95 t~~~~~~~~ 103 (316)
..++.....
T Consensus 124 ~~li~~~~~ 132 (537)
T PLN02246 124 KLIITQSCY 132 (537)
T ss_pred cEEEEccch
Confidence 876655443
No 149
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=63.54 E-value=1e+02 Score=30.10 Aligned_cols=79 Identities=4% Similarity=-0.092 Sum_probs=58.3
Q ss_pred EEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
-.+|.+.|...+..+.. ..++.++|++...+|. ...++..++..+..|+..+...+.. .+..+...+++.++
T Consensus 82 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n--~~e~v~~~lA~~~~Gav~vpl~~~~---~~~~l~~~l~~~~~ 156 (628)
T TIGR02316 82 RTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPM--IAEAVFAMLACARIGAIHSVVFGGF---ASHSLALRIDDATP 156 (628)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHhCCEEEecCCCC---CHHHHHHHHHhcCc
Confidence 36889888776655444 3578899999999875 3466666888999999888776552 45677788888888
Q ss_pred eeEEecc
Q psy14342 95 RDTFCSY 101 (316)
Q Consensus 95 t~~~~~~ 101 (316)
.++++..
T Consensus 157 ~~li~~~ 163 (628)
T TIGR02316 157 KLIVSAD 163 (628)
T ss_pred eEEEECC
Confidence 8776643
No 150
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=63.54 E-value=95 Score=30.27 Aligned_cols=79 Identities=5% Similarity=-0.038 Sum_probs=58.0
Q ss_pred EEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
-.+|.+.|...+..+.. ..++.++|++...+|-. ..++..++..+..|+..+...+.. .+..+...+++.++
T Consensus 83 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~Gav~v~~~~~~---~~~~l~~~l~~~~~ 157 (629)
T PRK10524 83 RTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMI--AEAAFAMLACARIGAIHSVVFGGF---ASHSLAARIDDAKP 157 (629)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--HHHHHHHHHHHHhCcEEEeeCCCC---CHHHHHHHHHhcCC
Confidence 46788888776655444 34788999999998753 356666788999999888776653 45677788888888
Q ss_pred eeEEecc
Q psy14342 95 RDTFCSY 101 (316)
Q Consensus 95 t~~~~~~ 101 (316)
.++++..
T Consensus 158 ~~li~~~ 164 (629)
T PRK10524 158 VLIVSAD 164 (629)
T ss_pred cEEEEcc
Confidence 8776644
No 151
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=63.16 E-value=35 Score=32.64 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=59.3
Q ss_pred EEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceeeEE
Q psy14342 19 KMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTF 98 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~~~ 98 (316)
.+|.+.+...+..+...+.-.++|++..++|-.. .++..++..+..|+..+..++.. ....+...++..++.+++
T Consensus 45 ~~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~---~~~~l~~~l~~~~~~~ii 119 (539)
T PRK06334 45 KLSYNQVRKAVIALATKVSKYPDQHIGIMMPASA--GAYIAYFATLLSGKIPVMINWSQ---GLREVTACANLVGVTHVL 119 (539)
T ss_pred cccHHHHHHHHHHHHHHHhhccCCeEEEEcCCch--HHHHHHHHHHhcCCeeEecCccc---chHHHHHHHHHcCCCEEE
Confidence 4788888888887777776668999998887544 55555789999999988877653 456777788888888766
Q ss_pred eccc
Q psy14342 99 CSYG 102 (316)
Q Consensus 99 ~~~~ 102 (316)
+...
T Consensus 120 ~~~~ 123 (539)
T PRK06334 120 TSKQ 123 (539)
T ss_pred ehHH
Confidence 5443
No 152
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=63.13 E-value=48 Score=31.80 Aligned_cols=79 Identities=11% Similarity=-0.058 Sum_probs=58.6
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+... .++.++|++...++-. ..++..++..+..|+.++..++.. .+..+...+++.++.
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~--~~~~~~~la~~~~Gav~vpl~~~~---~~~~l~~~l~~~~~~ 106 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNS--DLYLEWLLAVACAGGIVAPLNYRW---SFEEAKSAMLLVRPV 106 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCC--HHHHHHHHHHhhccEEEEeCCccc---CHHHHHHHHHhcCce
Confidence 57888887766655554 4788999999987753 356666788899999999877652 567778888888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
++++...
T Consensus 107 ~i~~~~~ 113 (563)
T PLN02860 107 MLVTDET 113 (563)
T ss_pred EEEEecc
Confidence 7766543
No 153
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=63.10 E-value=1e+02 Score=30.04 Aligned_cols=81 Identities=6% Similarity=-0.034 Sum_probs=60.0
Q ss_pred EEEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccc
Q psy14342 17 GIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 93 (316)
Q Consensus 17 ~V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
.-.+|.+.|...+..+... .++.++|++...+|-. ..++..++..+..|+..+...+.. .+..+...+++.+
T Consensus 86 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~Gav~v~i~~~~---~~~~l~~~l~~~~ 160 (625)
T TIGR02188 86 VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMI--PEAAIAMLACARIGAIHSVVFGGF---SAEALADRINDAG 160 (625)
T ss_pred eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--HHHHHHHHHHHHhCCEEeccCCCC---CHHHHHHHHHhcC
Confidence 3468999887766555443 5788999999998754 355665788899999888876653 4677888899998
Q ss_pred eeeEEeccc
Q psy14342 94 VRDTFCSYG 102 (316)
Q Consensus 94 ~t~~~~~~~ 102 (316)
+.++++...
T Consensus 161 ~~~li~~~~ 169 (625)
T TIGR02188 161 AKLVITADE 169 (625)
T ss_pred CCEEEEcCc
Confidence 887776544
No 154
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=62.36 E-value=65 Score=30.87 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=58.9
Q ss_pred EEeHHHHHHHHHHHHHHh----cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 19 KMSHAAVTSLCRSMKLAC----ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
.+|...+...+..+...+ ++.++|++..+++-. ..++..+|..+..|+.++..++.. ....+...+++.++
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~--~~~~~~~la~~~~Ga~~v~l~~~~---~~~~l~~~l~~~~~ 123 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNV--LQYPVAVFGAMRAGLIVVNTNPLY---TAREMEHQFNDSGA 123 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCeEEeecCCCC---CHHHHHHHHhccCc
Confidence 578888877766665543 678999999987754 356666889999999999887653 45677888888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
..+++...
T Consensus 124 ~~ii~~~~ 131 (562)
T PRK05677 124 KALVCLAN 131 (562)
T ss_pred eEEEEecc
Confidence 87765443
No 155
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=62.06 E-value=6.6 Score=38.13 Aligned_cols=26 Identities=8% Similarity=0.084 Sum_probs=25.3
Q ss_pred CCcccceeEECCcccChHhHHHHHHH
Q psy14342 200 RLALDETIMLRGMRYHPIDIENSVMR 225 (316)
Q Consensus 200 ~GR~dd~i~~~G~~v~p~eIE~~l~~ 225 (316)
+||.+.++++.|+|+.-++++.+|.+
T Consensus 431 ~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 431 IRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred EccCCcceecccccCCHHHHHHHHHH
Confidence 89999999999999999999999988
No 156
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=61.98 E-value=74 Score=29.85 Aligned_cols=81 Identities=12% Similarity=-0.016 Sum_probs=57.4
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++....+-.. ..+..++..+..|+..+..++.. ....+...+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~--~~~~~~la~~~~G~~~~~l~~~~---~~~~~~~~~~~~~~~ 85 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNP--EFFEVYWAARRSGLYYTPINWHL---TAAEIAYIVDDSGAK 85 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCH--HHHHHHHHHHhcCcEEEeccccc---CHHHHHHHHhcCCCC
Confidence 47888877666555543 46889999988877543 44444788999999998876642 345677888888888
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.++......
T Consensus 86 ~ii~~~~~~ 94 (502)
T PRK08276 86 VLIVSAALA 94 (502)
T ss_pred EEEEccchh
Confidence 776655443
No 157
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=61.86 E-value=61 Score=31.71 Aligned_cols=81 Identities=7% Similarity=-0.040 Sum_probs=61.0
Q ss_pred EEEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccc
Q psy14342 17 GIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 93 (316)
Q Consensus 17 ~V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
...+|.+.|...+..+... .++.++|++...+|- ...++..++..+..|+..+...+.. .+..+...+++.+
T Consensus 96 ~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n--~~e~~~~~lA~~~~Gav~v~l~~~~---~~~~l~~~l~~~~ 170 (637)
T PRK00174 96 SRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPM--IPEAAVAMLACARIGAVHSVVFGGF---SAEALADRIIDAG 170 (637)
T ss_pred eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCCEEEecCCCC---CHHHHHHHHHhcC
Confidence 4578999888776665554 478899999988764 3456666888999999998887653 4677888899988
Q ss_pred eeeEEeccc
Q psy14342 94 VRDTFCSYG 102 (316)
Q Consensus 94 ~t~~~~~~~ 102 (316)
+.++++...
T Consensus 171 ~~~li~~~~ 179 (637)
T PRK00174 171 AKLVITADE 179 (637)
T ss_pred CcEEEEcCc
Confidence 887776543
No 158
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=61.71 E-value=68 Score=30.05 Aligned_cols=80 Identities=9% Similarity=-0.064 Sum_probs=58.4
Q ss_pred EeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceee
Q psy14342 20 MSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRD 96 (316)
Q Consensus 20 ~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~ 96 (316)
+|.+.+...+..++.. .++++++++..+.|-.. .++..++..+..|+..+..++.. .+..+...+++.++..
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~--~~~~~~la~~~~G~~~v~~~~~~---~~~~~~~~i~~~~~~~ 106 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKKGDRVAVFDWNSH--EYLEAYFAVPKIGAVLHPINIRL---KPEEIAYILNDAEDRV 106 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCeEEEecccCC---CHHHHHHHHHhcCCeE
Confidence 8888877665554443 46788999999877644 55556889999999998887553 4567778888888887
Q ss_pred EEecccch
Q psy14342 97 TFCSYGML 104 (316)
Q Consensus 97 ~~~~~~~~ 104 (316)
.+......
T Consensus 107 i~~~~~~~ 114 (521)
T PRK06187 107 VLVDSEFV 114 (521)
T ss_pred EEEcchHH
Confidence 77665543
No 159
>PRK06839 acyl-CoA synthetase; Validated
Probab=61.59 E-value=67 Score=29.98 Aligned_cols=81 Identities=6% Similarity=0.020 Sum_probs=59.6
Q ss_pred EEEeHHHHHHHHHHHHHH----hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccc
Q psy14342 18 IKMSHAAVTSLCRSMKLA----CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 93 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
..+|+..+...+..+... +++.++|++...++-. ..++..++..+..|+..+..++.. ++..+...+++.+
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~--~~~~~~~la~~~~G~~~~~~~~~~---~~~~~~~~l~~~~ 100 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNS--LEYIVLLFAIAKVECIAVPLNIRL---TENELIFQLKDSG 100 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHHHHHHHHhcCcEEEecCccc---CHHHHHHHHHhcC
Confidence 468888888776666554 4678899988887654 456665788899999888877542 5667778888888
Q ss_pred eeeEEecccc
Q psy14342 94 VRDTFCSYGM 103 (316)
Q Consensus 94 ~t~~~~~~~~ 103 (316)
+..++..+..
T Consensus 101 ~~~i~~~~~~ 110 (496)
T PRK06839 101 TTVLFVEKTF 110 (496)
T ss_pred ceEEEEcHHH
Confidence 8877665544
No 160
>PRK07514 malonyl-CoA synthase; Validated
Probab=61.26 E-value=70 Score=29.96 Aligned_cols=82 Identities=7% Similarity=0.047 Sum_probs=59.6
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|...+...+..++.. .++.++|++....+-. ..+...++..+..|+..+..++.. .+..+...++..++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~--~e~~v~~la~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~ 101 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKS--PEALALYLATLRAGAVFLPLNTAY---TLAELDYFIGDAEP 101 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEEECCCCC---CHHHHHHHHHhCCC
Confidence 468888776666555543 4788999998887754 456666788999999998876652 45677888888888
Q ss_pred eeEEecccch
Q psy14342 95 RDTFCSYGML 104 (316)
Q Consensus 95 t~~~~~~~~~ 104 (316)
..++......
T Consensus 102 ~~ii~~~~~~ 111 (504)
T PRK07514 102 ALVVCDPANF 111 (504)
T ss_pred cEEEEccchh
Confidence 8776665443
No 161
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=61.21 E-value=49 Score=31.54 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=56.6
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+... .++.++|++..++|-. ..++..++..+..|+.++..++.. .+..+...+...++.
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~ 123 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGW--CEFTIIYLACLKVGAVSVPLLPSW---REAELVWVLNKCQAK 123 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEeccchhc---CHHHHHHHHHhcCCe
Confidence 57888887766555554 4788999999887643 356666889999999888877652 456777888888888
Q ss_pred eEEec
Q psy14342 96 DTFCS 100 (316)
Q Consensus 96 ~~~~~ 100 (316)
++++.
T Consensus 124 ~l~~~ 128 (547)
T PRK06087 124 MFFAP 128 (547)
T ss_pred EEEEe
Confidence 66553
No 162
>KOG1177|consensus
Probab=61.01 E-value=38 Score=31.85 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=56.1
Q ss_pred EEEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccc
Q psy14342 17 GIKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 93 (316)
Q Consensus 17 ~V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
++.+|-+.+...+++++. .++++.||++..|-|-+ +.|+.+.+..-..|..++...|. ...+ .+.=.+.+.+
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~--~~w~l~~lA~A~AG~v~v~~NP~--Yq~~-elr~~L~k~~ 149 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNS--YEWVLCQLACARAGLVLVNLNPA--YQSE-ELRYVLKKVG 149 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCCh--HHHHHHHHHHHHhceEEeccCcc--cccH-HHHHHHhhcC
Confidence 345566667666665544 46899999999998743 36666677777788888777665 3333 2333678888
Q ss_pred eeeEEecccch
Q psy14342 94 VRDTFCSYGML 104 (316)
Q Consensus 94 ~t~~~~~~~~~ 104 (316)
..+++..+.+.
T Consensus 150 ~k~l~~p~~~k 160 (596)
T KOG1177|consen 150 CKALFAPPQFK 160 (596)
T ss_pred eEEEEccchhh
Confidence 88777666543
No 163
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=60.78 E-value=68 Score=30.63 Aligned_cols=80 Identities=10% Similarity=0.123 Sum_probs=58.3
Q ss_pred EEeHHHHHHHHHHHHH----HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 19 KMSHAAVTSLCRSMKL----ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~----~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
.+|+..+...+..+.. ..++.++|++..++|-. ..++..++..+..|+..+..+|.. .+..+...+.+.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~p~~---~~~~~~~~l~~~~~ 124 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNC--LQYPIATFGVLRAGLTVVNVNPLY---TPRELKHQLIDSGA 124 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC--HHHHHHHHHHHHhCeEEeccCccC---CHHHHHHHHHhcCC
Confidence 5788887766655554 35788999999887654 355565788899999999887653 45677788888888
Q ss_pred eeEEecccc
Q psy14342 95 RDTFCSYGM 103 (316)
Q Consensus 95 t~~~~~~~~ 103 (316)
+...+....
T Consensus 125 ~~vi~~~~~ 133 (560)
T PRK08751 125 SVLVVIDNF 133 (560)
T ss_pred eEEEEcchh
Confidence 877665443
No 164
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=60.78 E-value=73 Score=29.91 Aligned_cols=81 Identities=16% Similarity=0.120 Sum_probs=58.2
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+... .++.++|++..+++-.. .+...++..+..|+.++..++.. .+..+...+++.++.
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~~ 99 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRL--ETVTAMFGAALAGGVFVPINPLL---KAEQVAHILADCNVR 99 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCEEEEeCCCCC---CHHHHHHHHHcCCCe
Confidence 57888877665544443 46778899988876544 45555788889999998877653 567788899999988
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.++.....+
T Consensus 100 ~~i~~~~~~ 108 (515)
T TIGR03098 100 LLVTSSERL 108 (515)
T ss_pred EEEEccchh
Confidence 777665443
No 165
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=60.75 E-value=62 Score=31.02 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=58.3
Q ss_pred EEEeHHHHHHHHHHHHHHh----cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccc
Q psy14342 18 IKMSHAAVTSLCRSMKLAC----ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 93 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~~----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
..+|...|...+..++..+ ++.++|++..+++-. ..+...++..+..|+..+...+.. ....+...+++.+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~--~e~~~~~la~~~~G~v~v~~~~~~---~~~~l~~~l~~~~ 122 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNV--LQYPIAVFGALRAGLIVVNTNPLY---TAREMRHQFKDSG 122 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCeEEeccCccC---CHHHHHHHHhccC
Confidence 3578888877766655544 678999998887643 466666889999999888776652 4567788888888
Q ss_pred eeeEEecc
Q psy14342 94 VRDTFCSY 101 (316)
Q Consensus 94 ~t~~~~~~ 101 (316)
+..++...
T Consensus 123 ~~~~i~~~ 130 (562)
T PRK12492 123 ARALVYLN 130 (562)
T ss_pred ceEEEecc
Confidence 88766544
No 166
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=60.36 E-value=60 Score=30.97 Aligned_cols=81 Identities=10% Similarity=0.001 Sum_probs=58.0
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+... .++.++|++...++-.. .++..++..+..|+..+..++.. .+..+...+++.++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~~~---~~~~l~~~l~~~~~ 128 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVA--EYGIVALGIMAAGGVFSGANPTA---LESEIKKQAEAAGA 128 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCch--HHHHHHHHHHHhCcEeccCCccC---CHHHHHHHHHhcCC
Confidence 357888887766555443 46888999988876544 55555788999999888776542 45677888988888
Q ss_pred eeEEecccc
Q psy14342 95 RDTFCSYGM 103 (316)
Q Consensus 95 t~~~~~~~~ 103 (316)
..+++....
T Consensus 129 ~~~i~~~~~ 137 (546)
T PLN02330 129 KLIVTNDTN 137 (546)
T ss_pred eEEEEccch
Confidence 877665543
No 167
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=60.32 E-value=71 Score=30.53 Aligned_cols=80 Identities=9% Similarity=0.094 Sum_probs=58.1
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|...+...+..+... .++.++|++..+++-.. .++..++..+..|+..+...+.. .+..+...+++.+.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~v~~~~---~~~~~~~~~~~~~~ 121 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVL--QYPVAIAAVLRAGYVVVNVNPLY---TPRELEHQLKDSGA 121 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCeEEeccCccc---CHHHHHHHHHccCc
Confidence 368888887766555543 46889999998876543 55555788999999999877653 46677888888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
...+....
T Consensus 122 ~~vi~~~~ 129 (557)
T PRK07059 122 EAIVVLEN 129 (557)
T ss_pred eEEEEchh
Confidence 87665443
No 168
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=60.30 E-value=79 Score=30.05 Aligned_cols=81 Identities=9% Similarity=0.086 Sum_probs=59.0
Q ss_pred EEeHHHHHHHHHHHHHH----hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 19 KMSHAAVTSLCRSMKLA----CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
.+|...+...+..+... +++.++|++..+.+-. ..++..++..+..|+..+..++.. .+..+...+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~ 109 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNS--PQFVIAYYAILRANAVVVPVNPMN---REEELAHYVTDSGA 109 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCC--hHHHHHHHHHHHcCcEEeecCcCc---CHHHHHHHHHhCCC
Confidence 47888776665544443 3888999998887743 366666888899999999887653 56778889999998
Q ss_pred eeEEecccch
Q psy14342 95 RDTFCSYGML 104 (316)
Q Consensus 95 t~~~~~~~~~ 104 (316)
..+++.....
T Consensus 110 ~~ii~~~~~~ 119 (546)
T PRK08314 110 RVAIVGSELA 119 (546)
T ss_pred eEEEEccchh
Confidence 8777665443
No 169
>PLN02614 long-chain acyl-CoA synthetase
Probab=60.13 E-value=63 Score=31.98 Aligned_cols=80 Identities=6% Similarity=-0.051 Sum_probs=59.7
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+... .++.++|++...++-. ..++...+..+..|+..+...+.. .+..+..++++.++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~--~e~~~~~lA~~~~Gav~vpl~~~~---~~~~l~~il~~~~~ 152 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANS--PEWIISMEACNAHGLYCVPLYDTL---GAGAVEFIISHSEV 152 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCCEEEEecCCC---CHHHHHHHHhccCC
Confidence 357888887766655543 5788999998887743 466666889999999999887653 56778888999988
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
.++++...
T Consensus 153 ~~vi~~~~ 160 (666)
T PLN02614 153 SIVFVEEK 160 (666)
T ss_pred CEEEECHH
Confidence 87776543
No 170
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=59.87 E-value=64 Score=31.85 Aligned_cols=80 Identities=8% Similarity=-0.012 Sum_probs=60.1
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+... .++.++|++..+++- ...++...+..+..|+..+...+.. .+..+..++++.++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n--~~e~~~~~lA~~~~G~v~vpl~~~~---~~~~l~~il~~s~~ 150 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQGITYVPLYDTL---GANAVEFIINHAEV 150 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCCeEEEecCCC---CHHHHHHHHHcCCC
Confidence 468999888776665554 478899999888774 3466666789999999998877653 46677888888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
.++++...
T Consensus 151 ~~v~~~~~ 158 (660)
T PLN02861 151 SIAFVQES 158 (660)
T ss_pred CEEEECHH
Confidence 87776443
No 171
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=59.58 E-value=72 Score=30.47 Aligned_cols=81 Identities=12% Similarity=0.056 Sum_probs=59.7
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+...+ ++.+++++..+.|-.. .++..++..+..|+..+..++.. .+..+...+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~--~~~~~~lA~~~~G~~~vpl~~~~---~~~~l~~~l~~~~~~ 120 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRI--EFLDVFLGCAWLGAIAVPINTAL---RGPQLEHILRNSGAR 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCh--HHHHHHHHHHHhCCEEEEecccc---CHHHHHHHHHhcCce
Confidence 577777777666655544 6788999988877544 55555788999999999887653 567788899999988
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.+++.....
T Consensus 121 ~l~~~~~~~ 129 (542)
T PRK06155 121 LLVVEAALL 129 (542)
T ss_pred EEEEChhhH
Confidence 777655443
No 172
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=59.53 E-value=64 Score=31.69 Aligned_cols=80 Identities=15% Similarity=0.065 Sum_probs=59.2
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.|...+..+... .++.++|++...+|-. ..++..++..+..|+..+.+.+.. .+..+...++..++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~v~~~lA~~~~Gav~v~l~~~~---~~~~l~~~l~~~~~ 187 (655)
T PRK03584 113 RELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNI--PETVVAMLATASLGAIWSSCSPDF---GVQGVLDRFGQIEP 187 (655)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCcEEEeeCCCC---CHHHHHHHHHHcCC
Confidence 468888887766655444 4788999999998753 455666788999999998887652 45677788888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
.++++...
T Consensus 188 ~~li~~~~ 195 (655)
T PRK03584 188 KVLIAVDG 195 (655)
T ss_pred cEEEEccc
Confidence 87766543
No 173
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=59.45 E-value=11 Score=36.04 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=21.8
Q ss_pred eEEEEeccCCCCC-ceEEEEeHHHHHH
Q psy14342 2 LAYLDFSVSTTGM-LAGIKMSHAAVTS 27 (316)
Q Consensus 2 ~a~i~~TSGTTG~-PK~V~~t~~~l~~ 27 (316)
+.+..-||||||. ||-+..|.+.+..
T Consensus 82 ~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 82 PIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp -SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 4577889999999 9999999987654
No 174
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=59.19 E-value=1.3e+02 Score=29.69 Aligned_cols=80 Identities=15% Similarity=0.077 Sum_probs=59.2
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.|...+..+... .++.++|++...+|.. ..++..++..+..|+..+...+.. .+..+...+++.++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~--~e~~~~~lA~~~~Gav~vp~~~~~---~~~~l~~~l~~~~~ 187 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNI--PQAVVAMLATASVGAIWSSCSPDF---GARGVLDRFQQIEP 187 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHHhCeEEEecCCCC---CHHHHHHHHHhcCC
Confidence 468898887766655544 4788999999998764 355555788999999888876653 46677888888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
.++++...
T Consensus 188 k~li~~~~ 195 (652)
T TIGR01217 188 KLLFTVDG 195 (652)
T ss_pred cEEEEccc
Confidence 87766543
No 175
>PRK05857 acyl-CoA synthetase; Validated
Probab=58.74 E-value=61 Score=30.92 Aligned_cols=80 Identities=9% Similarity=-0.041 Sum_probs=58.3
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+... .++.++|++...++-.. .++..++..+..|+..+..++.. .+..+.+.++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~--e~~~~~lA~~~~G~v~v~l~~~~---~~~~l~~~~~~~~~ 114 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGP--ETYLSVLACAKLGAIAVMADGNL---PIAAIERFCQITDP 114 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCH--HHHHHHHHHHHcCeEEEecCccC---CHHHHHHHHHhcCC
Confidence 358888887776666554 46788999988887544 45555788999999999887553 46677778888887
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
..+++.+.
T Consensus 115 ~~ii~~~~ 122 (540)
T PRK05857 115 AAALVAPG 122 (540)
T ss_pred ceEEEecc
Confidence 77666543
No 176
>PRK08162 acyl-CoA synthetase; Validated
Probab=58.73 E-value=77 Score=30.13 Aligned_cols=81 Identities=10% Similarity=0.018 Sum_probs=60.3
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+...+ ++.++|++....|-.. .++..++..+..|+..+..++.. .+..+...+++.+++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~~~---~~~~~~~~l~~~~~~ 117 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIP--AMVEAHFGVPMAGAVLNTLNTRL---DAASIAFMLRHGEAK 117 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCch--HHHHHHHHHHHhCcEEecccccc---ChHHHHHHHHhCCCe
Confidence 578888877766555544 7888999988877544 56665788899999888877653 566788899999998
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.++..+...
T Consensus 118 ~i~~~~~~~ 126 (545)
T PRK08162 118 VLIVDTEFA 126 (545)
T ss_pred EEEEccchh
Confidence 877765543
No 177
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=58.66 E-value=44 Score=26.35 Aligned_cols=52 Identities=19% Similarity=0.171 Sum_probs=36.8
Q ss_pred hHhHHHHHHHhccccceeEEEeeCCcEEEEEEecCCchh--hcchHHHHHHHHHH
Q psy14342 216 PIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESE--ALDLVPLVTNAVLE 268 (316)
Q Consensus 216 p~eIE~~l~~~~p~v~~~~v~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~l~~ 268 (316)
...|.+.+.+ .|+|.+|.++..++.+.+.+.+...... .+++...+.+.+..
T Consensus 56 A~~Ia~~v~~-v~~V~dA~vvVtg~~A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 56 ADEIASEAAK-VKGVKDATVVITGNYAYVGVDLTNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHHhc-CCCCceEEEEEECCEEEEEEEcCCCcchhhHHHHHHHHHHHHHh
Confidence 3557777777 9999999999999988777766643222 24566666666664
No 178
>KOG1176|consensus
Probab=58.55 E-value=86 Score=30.21 Aligned_cols=86 Identities=12% Similarity=0.139 Sum_probs=64.7
Q ss_pred EEEEeHHHHHHHHHHHHHHhc-----CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhc
Q psy14342 17 GIKMSHAAVTSLCRSMKLACE-----LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQ 91 (316)
Q Consensus 17 ~V~~t~~~l~~~~~~~~~~~~-----~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~ 91 (316)
|..+|++.+...+..++..+. ++.+|++....|-.- .+....+..+..|+.+.-..|.- ++......++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~--~~~~~~la~~~~Ga~~~~~Np~~---~~~ei~~~~~~ 117 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTP--EFVELALAVPMAGAVLNPLNPRL---TASEIAKQLKD 117 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCccccccCccc---CHHHHHHHHHh
Confidence 678999998888777666553 678999999987533 45555678888899887776652 56778889999
Q ss_pred cceeeEEecccchhhH
Q psy14342 92 YRVRDTFCSYGMLAGI 107 (316)
Q Consensus 92 ~~~t~~~~~~~~~~~l 107 (316)
-++.++++....+...
T Consensus 118 s~~kiif~d~~~~~~i 133 (537)
T KOG1176|consen 118 SKPKLIFVDEDFYDKI 133 (537)
T ss_pred cCCeEEEEcCchHHHH
Confidence 9999888877766544
No 179
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.40 E-value=72 Score=30.63 Aligned_cols=80 Identities=10% Similarity=0.015 Sum_probs=59.0
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++..+|++..+.|-.. .++..++..+..|+.++..++.. .+..+...+.+.++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~ 131 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCP--QHIVAFYAVLRLGAVVVEHNPLY---TAHELEHPFEDHGAR 131 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCcEEeecCcCC---CHHHHHHHHhccCCc
Confidence 47888777666555544 46788999999877544 56666788999999999887653 567788899999988
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
.+++....
T Consensus 132 ~ii~~~~~ 139 (573)
T PRK05605 132 VAIVWDKV 139 (573)
T ss_pred EEEechhh
Confidence 77765543
No 180
>PRK08315 AMP-binding domain protein; Validated
Probab=58.36 E-value=67 Score=30.64 Aligned_cols=78 Identities=8% Similarity=0.040 Sum_probs=57.7
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|+..+...+..+... .++.++|++..+.+-. ..++..++..+..|+..+..++.. ....+...+++.+++
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~--~~~~~~~la~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~~ 117 (559)
T PRK08315 43 RWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNV--PEWVLTQFATAKIGAILVTINPAY---RLSELEYALNQSGCK 117 (559)
T ss_pred EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--hHHHHHHHHHHHhCeEEEecCccC---CHHHHHHHHHhcCCC
Confidence 47888887766555554 4678899998887654 355555889999999999887653 456778889999988
Q ss_pred eEEecc
Q psy14342 96 DTFCSY 101 (316)
Q Consensus 96 ~~~~~~ 101 (316)
.++...
T Consensus 118 ~ii~~~ 123 (559)
T PRK08315 118 ALIAAD 123 (559)
T ss_pred EEEEec
Confidence 766654
No 181
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=57.17 E-value=63 Score=31.03 Aligned_cols=80 Identities=5% Similarity=-0.042 Sum_probs=57.6
Q ss_pred EEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+.. ..++.++|++...++-. ..++..++..+..|+.++...+.. .+..+...+++.++
T Consensus 72 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~--~~~~~~~la~~~~G~v~vpl~~~~---~~~~l~~~l~~~~~ 146 (570)
T PRK04319 72 EKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRI--PELYFALLGALKNGAIVGPLFEAF---MEEAVRDRLEDSEA 146 (570)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEccccccc---CHHHHHHHHHccCC
Confidence 36788888766655444 35788999998887743 356666788999999988776553 45677788888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
+.+++.+.
T Consensus 147 ~~ii~~~~ 154 (570)
T PRK04319 147 KVLITTPA 154 (570)
T ss_pred cEEEEChh
Confidence 87666544
No 182
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=56.50 E-value=74 Score=28.68 Aligned_cols=64 Identities=11% Similarity=0.129 Sum_probs=48.8
Q ss_pred hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceeeEEecccch
Q psy14342 36 CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYGML 104 (316)
Q Consensus 36 ~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 104 (316)
.++.++|++..+.|-. ..++..++..+..|+.++..++.. .+..+..++++.++..++......
T Consensus 20 ~g~~~gd~v~l~~~n~--~~~~~~~~a~~~~G~~~v~~~~~~---~~~~~~~~l~~~~~~~ii~~~~~~ 83 (408)
T TIGR01733 20 GGVGPGDRVAVLLERS--AELVVAILAVLKAGAAYVPLDPAY---PAERLAFILEDAGARLLLTDSALA 83 (408)
T ss_pred hCCCCCCEEEEEeCCC--HHHHHHHHHHHHhCCEEEEcCCCC---CHHHHHHHHHhcCCCEEEEcCchh
Confidence 5688899999998765 355555788899999998887653 456777889999999887766544
No 183
>PRK09088 acyl-CoA synthetase; Validated
Probab=56.25 E-value=76 Score=29.61 Aligned_cols=77 Identities=6% Similarity=-0.033 Sum_probs=56.5
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++..+.+-.. .++..++..+..|+..+..++.. .+..+...+++.+++
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~--~~~~~~la~~~~G~~~v~~~~~~---~~~~~~~~~~~~~~~ 96 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSV--WLVALHFACARVGAIYVPLNWRL---SASELDALLQDAEPR 96 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCeEEEeeCccC---CHHHHHHHHHhCCCC
Confidence 57888887766655444 46778899988876544 55555788999999998887653 466778888888888
Q ss_pred eEEec
Q psy14342 96 DTFCS 100 (316)
Q Consensus 96 ~~~~~ 100 (316)
.++..
T Consensus 97 ~ii~~ 101 (488)
T PRK09088 97 LLLGD 101 (488)
T ss_pred EEEEc
Confidence 77654
No 184
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=56.08 E-value=1.1e+02 Score=29.18 Aligned_cols=82 Identities=9% Similarity=-0.045 Sum_probs=59.6
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|...+...+..+... .++.++|++..+.+-.. .++..++..+..|+..+..++.. .+..+..++++.++
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~ 112 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTW--RHLEAWYGIMGIGAICHTVNPRL---FPEQIAWIINHAED 112 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--HHHHHHHHHHhcCeEeecccccc---CHHHHHHHHhccCC
Confidence 467899887776665554 46888999988876543 45555788888999988887653 46677888888888
Q ss_pred eeEEecccch
Q psy14342 95 RDTFCSYGML 104 (316)
Q Consensus 95 t~~~~~~~~~ 104 (316)
..+++.....
T Consensus 113 ~~i~~~~~~~ 122 (542)
T PRK06018 113 RVVITDLTFV 122 (542)
T ss_pred CEEEEccccH
Confidence 8777655443
No 185
>PRK13388 acyl-CoA synthetase; Provisional
Probab=55.50 E-value=99 Score=29.48 Aligned_cols=79 Identities=9% Similarity=0.056 Sum_probs=57.6
Q ss_pred EEeHHHHHHHHHHHHHHh---cC-CCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 19 KMSHAAVTSLCRSMKLAC---EL-YPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~-~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
.+|...+...+..+...+ ++ .++|++..+++-.. .++..++..+..|+.++..+|.. ....+...+.+.++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~--~~v~~~lA~~~~Ga~~v~l~p~~---~~~~l~~~l~~~~~ 100 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTP--EMLFWLAAAALGGYVLVGLNTTR---RGAALAADIRRADC 100 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCc--HHHHHHHHHHhCCCEEEEecccC---ChHHHHHHHHhcCC
Confidence 678888877766655543 67 68898888877443 56666788999999999887653 45677788888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
.++++...
T Consensus 101 ~~~i~~~~ 108 (540)
T PRK13388 101 QLLVTDAE 108 (540)
T ss_pred CEEEEChh
Confidence 87766443
No 186
>PRK13383 acyl-CoA synthetase; Provisional
Probab=55.36 E-value=1e+02 Score=29.11 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=58.4
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++...++- ...++..++..+..|+..+..++.. .+..+...+++.++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~--~~~~~~~~la~~~~G~v~vpl~~~~---~~~~l~~~l~~~~~~ 134 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRN--GRGFVTAVFAVGLLGADVVPISTEF---RSDALAAALRAHHIS 134 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCC--CHHHHHHHHHHHHhCeEEEEcCccC---CHHHHHHHHhcCCCC
Confidence 47777776665555554 468889988888763 4466666888999999999887653 467788888899988
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
.++.....
T Consensus 135 ~ii~~~~~ 142 (516)
T PRK13383 135 TVVADNEF 142 (516)
T ss_pred EEEEchhH
Confidence 77765544
No 187
>PRK06164 acyl-CoA synthetase; Validated
Probab=55.07 E-value=72 Score=30.29 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=57.3
Q ss_pred EEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+.. ..++.++|++..+.+-.. .++..++..+..|+.++..++.. ....+...+++.+++
T Consensus 35 ~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~i~~~~~~ 109 (540)
T PRK06164 35 PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCI--EWVVLFLACARLGATVIAVNTRY---RSHEVAHILGRGRAR 109 (540)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcH--HHHHHHHHHHHhCcEEEecCCCC---CcHHHHHHHHhcCcc
Confidence 5788877666555444 346788999988877554 55555788899999998887653 456778888888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
.+++.+.
T Consensus 110 ~ii~~~~ 116 (540)
T PRK06164 110 WLVVWPG 116 (540)
T ss_pred EEEEccc
Confidence 7766544
No 188
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=54.80 E-value=93 Score=33.77 Aligned_cols=78 Identities=10% Similarity=0.056 Sum_probs=57.9
Q ss_pred EEEEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccc
Q psy14342 17 GIKMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 93 (316)
Q Consensus 17 ~V~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
...+|.+.|...+..+...+ ++.++|++..+++-. ..++..++..+..|+..+..+|.. .+.+...+++..+
T Consensus 268 ~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~--~~~i~~~lA~l~~G~~~vpldp~~---p~~~~~~~l~~~~ 342 (1389)
T TIGR03443 268 TRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRG--VDLVVAVMGVLKAGATFSVIDPAY---PPARQTIYLSVAK 342 (1389)
T ss_pred CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCC--HHHHHHHHHHHhhCcEEeccCCCC---cHHHHHHHHHhcC
Confidence 34689998887776666544 688999999887754 456666889999999999887653 3566777787777
Q ss_pred eeeEEe
Q psy14342 94 VRDTFC 99 (316)
Q Consensus 94 ~t~~~~ 99 (316)
+..++.
T Consensus 343 ~~~li~ 348 (1389)
T TIGR03443 343 PRALIV 348 (1389)
T ss_pred CCEEEE
Confidence 765554
No 189
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=54.45 E-value=1.1e+02 Score=28.65 Aligned_cols=81 Identities=10% Similarity=0.060 Sum_probs=58.5
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+... .++.++|++..+.+-. ..++..++..+..|+..+..++.. .+..+.+.+++.++.
T Consensus 30 ~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~~ 104 (513)
T PRK07656 30 RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNS--PHWVIAALGALKAGAVVVPLNTRY---TADEAAYILARGDAK 104 (513)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--hHHHHHHHHHHhcCeEEEecCccc---CHHHHHHHHhhcCce
Confidence 57888887766555543 4678899999887654 345555788889999998887653 456778889999998
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.+++.....
T Consensus 105 ~ii~~~~~~ 113 (513)
T PRK07656 105 ALFVLGLFL 113 (513)
T ss_pred EEEEchhhH
Confidence 877665543
No 190
>PRK06178 acyl-CoA synthetase; Validated
Probab=54.04 E-value=1.1e+02 Score=29.35 Aligned_cols=81 Identities=9% Similarity=0.034 Sum_probs=58.9
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++....+-.. .++..++..+..|+..+..+|.. .+..+...+++.++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~p~~---~~~~~~~~l~~~~~~ 132 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCP--QFHIVFFGILKLGAVHVPVSPLF---REHELSYELNDAGAE 132 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCc--HHHHHHHHHHHhCeEEeecCCCC---CHHHHHHHHHhcCCc
Confidence 57888877666555443 46788999988877655 45555788899999888877653 456778889898888
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.+++.....
T Consensus 133 ~ii~~~~~~ 141 (567)
T PRK06178 133 VLLALDQLA 141 (567)
T ss_pred EEEEccchH
Confidence 777765543
No 191
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=54.02 E-value=2.1e+02 Score=27.62 Aligned_cols=94 Identities=7% Similarity=0.089 Sum_probs=64.6
Q ss_pred EEEEeccCCCCCceEEEEeHHHHHHHHHHHHHH----hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc
Q psy14342 3 AYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA----CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV 78 (316)
Q Consensus 3 a~i~~TSGTTG~PK~V~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~ 78 (316)
..|+|-+-.++. -.+|.+.|...+..+... .++ .+|+++.++|+.- ..+..++.....|+--+.+-+. |
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~p--e~~~a~LA~~riGAI~~~vf~~-f 99 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSP--EAVIALLATARIGAIPAVVSPG-L 99 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCH--HHHHHHHHHHHcCCEEeecccC-C
Confidence 456666555554 478888877665544443 446 8999999999744 5666678888889866655443 2
Q ss_pred ccChHHHHHHHhccceeeEEecccchh
Q psy14342 79 EVNPALWLSAVSQYRVRDTFCSYGMLA 105 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~~~~~~~~~~ 105 (316)
.+..+...+.+.++.++.+....++
T Consensus 100 --~~~al~~Ri~d~~~k~vit~d~~~~ 124 (528)
T COG0365 100 --SAEAVADRIADLGPKVLIADDGTFR 124 (528)
T ss_pred --CHHHHHHHHHccCCCEEEEeccccc
Confidence 4777888888888887776655544
No 192
>PRK08316 acyl-CoA synthetase; Validated
Probab=52.96 E-value=1.2e+02 Score=28.41 Aligned_cols=82 Identities=11% Similarity=0.014 Sum_probs=57.7
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|...+...+..+... .++.++|++..+.+-.. .+...++..+..|+..+..++.. .+......+++.++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~--~~~~~~~a~~~~G~~~v~l~~~~---~~~~i~~~l~~~~~ 109 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSD--AYALLWLACARAGAVHVPVNFML---TGEELAYILDHSGA 109 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHhcCcEEEeccccc---CHHHHHHHHHhCCC
Confidence 457888776665554443 46788999988876544 44444788889999888877553 45677788888888
Q ss_pred eeEEecccch
Q psy14342 95 RDTFCSYGML 104 (316)
Q Consensus 95 t~~~~~~~~~ 104 (316)
..++......
T Consensus 110 ~~ii~~~~~~ 119 (523)
T PRK08316 110 RAFLVDPALA 119 (523)
T ss_pred CEEEEccchH
Confidence 8777665543
No 193
>PRK12582 acyl-CoA synthetase; Provisional
Probab=52.78 E-value=89 Score=30.50 Aligned_cols=81 Identities=16% Similarity=0.174 Sum_probs=57.1
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccc--cChHHHHHHHhcc
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVE--VNPALWLSAVSQY 92 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~--~~~~~~~~~~~~~ 92 (316)
-.+|.+.+...+..+... .++.++|++..+++- ...++..++..+..|+.++..++..-. .....+..++++.
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~ 156 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGN--SIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLV 156 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCC--CHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhc
Confidence 468999888777665554 478899999998773 346666688999999999887664210 1135677788888
Q ss_pred ceeeEEec
Q psy14342 93 RVRDTFCS 100 (316)
Q Consensus 93 ~~t~~~~~ 100 (316)
++..+++.
T Consensus 157 ~~~~vi~~ 164 (624)
T PRK12582 157 KPRVVFAQ 164 (624)
T ss_pred CCcEEEec
Confidence 87766554
No 194
>PRK07470 acyl-CoA synthetase; Validated
Probab=52.76 E-value=1.2e+02 Score=28.67 Aligned_cols=80 Identities=8% Similarity=0.004 Sum_probs=57.9
Q ss_pred EEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+.. ..++.++|++....+- ...++..++..+..|+..+..++.. .+..+..++++.+++
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~---~~~~~~~~~~~~~~~ 106 (528)
T PRK07470 32 SWTWREIDARVDALAAALAARGVRKGDRILVHSRN--CNQMFESMFAAFRLGAVWVPTNFRQ---TPDEVAYLAEASGAR 106 (528)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCC--CHHHHHHHHHHHhCCeEEEecCccC---CHHHHHHHHHhcCce
Confidence 5788877666555444 3468889998888664 4466666788999999888877653 456778899999998
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
.++.....
T Consensus 107 ~~i~~~~~ 114 (528)
T PRK07470 107 AMICHADF 114 (528)
T ss_pred EEEEcchh
Confidence 77666543
No 195
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=51.94 E-value=1.1e+02 Score=29.66 Aligned_cols=83 Identities=7% Similarity=0.088 Sum_probs=57.3
Q ss_pred EEEeHHHHHHHHHHHHHHhc--CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 18 IKMSHAAVTSLCRSMKLACE--LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
..+|...+...+..+...+. +.++|++...++-.. .++..++..+..|+..+.+.+..+...+..+...+++.++.
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~--e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 144 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGI--DYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPT 144 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCCh--hHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCC
Confidence 46889888777665555442 678999988887654 56666889999999887652222222256777888888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
++++...
T Consensus 145 ~li~~~~ 151 (612)
T PRK12476 145 VVLTTTA 151 (612)
T ss_pred EEEEcHH
Confidence 7776544
No 196
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=51.79 E-value=1.2e+02 Score=30.16 Aligned_cols=82 Identities=11% Similarity=0.063 Sum_probs=60.7
Q ss_pred EEEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+.. ..++.++|++..+++- ...++...+..+..|+.++...+.. .+..+...+.+.++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n--~~e~~~~~lA~~~~G~v~vpl~~~~---~~~~l~~il~~s~~ 179 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADT--RAEWLIALQGCFRQNITVVTIYASL---GEEALCHSLNETEV 179 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCCeEEEecCCC---CHHHHHHHHHccCC
Confidence 45888888776665554 4578899999888764 3466666788899999999876553 56778889999998
Q ss_pred eeEEecccch
Q psy14342 95 RDTFCSYGML 104 (316)
Q Consensus 95 t~~~~~~~~~ 104 (316)
.++++....+
T Consensus 180 ~~li~~~~~~ 189 (696)
T PLN02387 180 TTVICDSKQL 189 (696)
T ss_pred CEEEECHHHH
Confidence 8877765443
No 197
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=51.63 E-value=1.9e+02 Score=27.72 Aligned_cols=79 Identities=13% Similarity=0.172 Sum_probs=58.8
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+...+ ++.++|++...+|-+. .++..+|..+..|+..+..+|.. .+..+...++..++.
T Consensus 38 ~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~--e~~~~~~a~~~~Gav~vpln~~~---~~~~l~~~l~~~~~~ 112 (534)
T COG0318 38 RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSP--EFLIAFLAALRAGAVAVPLNPRL---TPRELAYILNDAGAK 112 (534)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHhcCEEEeecCccc---CHHHHHHHHHhcCCe
Confidence 788988887766655543 4678999888877544 55555789999999999988763 567777788888887
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
.++....
T Consensus 113 ~~~~~~~ 119 (534)
T COG0318 113 VLITSAE 119 (534)
T ss_pred EEEEccc
Confidence 7766655
No 198
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=51.40 E-value=1.1e+02 Score=29.51 Aligned_cols=80 Identities=10% Similarity=0.042 Sum_probs=57.0
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++..+++-. ..++..++..+..|+.++..++.. ....+...+++.++.
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~--~~~v~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~ 136 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENR--PEYLAAWLGLAKLGAVVALLNTQQ---RGAVLAHSLNLVDAK 136 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHHHHHHHHhcCcEEeecCCCC---CHHHHHHHHHhcCCC
Confidence 47788777665554443 4778899998887644 355666888999999988876653 456677888888888
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
.+++....
T Consensus 137 ~li~~~~~ 144 (600)
T PRK08279 137 HLIVGEEL 144 (600)
T ss_pred EEEEChHH
Confidence 77665443
No 199
>PRK12583 acyl-CoA synthetase; Provisional
Probab=51.10 E-value=1.1e+02 Score=29.04 Aligned_cols=79 Identities=13% Similarity=0.160 Sum_probs=58.2
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+... .++.++|++..+.|-.. .++..++..+..|+..+...+.. .+..+...+.+.++.
T Consensus 45 ~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~--~~~~~~~a~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~~ 119 (558)
T PRK12583 45 RYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCA--EWLLTQFATARIGAILVNINPAY---RASELEYALGQSGVR 119 (558)
T ss_pred EecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh--HHHHHHHHHHhhCCEEEecCCCC---CHHHHHHHHHhcCCc
Confidence 57888887766655543 46788999888876533 56666789999999999877653 567788899999988
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
.+++.+.
T Consensus 120 ~ii~~~~ 126 (558)
T PRK12583 120 WVICADA 126 (558)
T ss_pred EEEEecc
Confidence 7766543
No 200
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=50.98 E-value=99 Score=30.11 Aligned_cols=81 Identities=15% Similarity=0.156 Sum_probs=58.1
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccc--ccChHHHHHHHhcc
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEV--EVNPALWLSAVSQY 92 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~--~~~~~~~~~~~~~~ 92 (316)
..+|.+.+...+..+... .++.++|++..+++-. ..++..++..+..|+.++..++..- ...+..+...+++.
T Consensus 68 ~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~--~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~ 145 (614)
T PRK08180 68 RRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNS--IEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELL 145 (614)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCC--HHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcC
Confidence 468898888777665554 4788999998887654 3566667899999999998876421 01156777788888
Q ss_pred ceeeEEec
Q psy14342 93 RVRDTFCS 100 (316)
Q Consensus 93 ~~t~~~~~ 100 (316)
++.++++.
T Consensus 146 ~~~~li~~ 153 (614)
T PRK08180 146 TPGLVFAD 153 (614)
T ss_pred CCcEEEEc
Confidence 88866654
No 201
>PRK07529 AMP-binding domain protein; Validated
Probab=50.76 E-value=1.7e+02 Score=28.70 Aligned_cols=81 Identities=10% Similarity=-0.037 Sum_probs=56.5
Q ss_pred eEEEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcc
Q psy14342 16 AGIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQY 92 (316)
Q Consensus 16 K~V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~ 92 (316)
+...+|.+.+...+..+... .++.++|++...+|-.. .++..++..+..|. ++...+. ..+..+..++++.
T Consensus 55 ~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~--e~~~~~lA~~~~Gi-~~pi~~~---~~~~~i~~~l~~~ 128 (632)
T PRK07529 55 RPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLP--ETHFALWGGEAAGI-ANPINPL---LEPEQIAELLRAA 128 (632)
T ss_pred CCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCE-EEeCCCc---CCHHHHHHHHHhc
Confidence 34578999887766655554 47889999999988543 55555677777774 4444433 3577888999999
Q ss_pred ceeeEEeccc
Q psy14342 93 RVRDTFCSYG 102 (316)
Q Consensus 93 ~~t~~~~~~~ 102 (316)
++.++++..+
T Consensus 129 ~~~~li~~~~ 138 (632)
T PRK07529 129 GAKVLVTLGP 138 (632)
T ss_pred CCcEEEEeCC
Confidence 9988776543
No 202
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=49.79 E-value=1.2e+02 Score=28.38 Aligned_cols=81 Identities=11% Similarity=0.063 Sum_probs=58.8
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..++.. .++.++|++..+.|-. ..++..++..+..|+..+...+.. .+..+...+++.+++
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~~ 85 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRND--FAFFEAAYAAMRLGAYAVPVNWHF---KPEEIAYILEDSGAR 85 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCeEEEecCccc---CHHHHHHHHhccCCc
Confidence 57888777666555554 4678999998887753 456666788899999998877653 466778889999988
Q ss_pred eEEecccch
Q psy14342 96 DTFCSYGML 104 (316)
Q Consensus 96 ~~~~~~~~~ 104 (316)
.++......
T Consensus 86 ~i~~~~~~~ 94 (509)
T PRK12406 86 VLIAHADLL 94 (509)
T ss_pred EEEEccchh
Confidence 777654433
No 203
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=49.54 E-value=1.2e+02 Score=29.97 Aligned_cols=79 Identities=8% Similarity=-0.045 Sum_probs=58.6
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+... .++.++|++..+++- ...++...+..+..|+.++...+.. .+..+..+++..+++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n--~~ew~~~~lA~~~~G~v~vpl~~~~---~~~~l~~il~~~~~~ 150 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSN--CPQWIVAMEACAAHSLICVPLYDTL---GPGAVDYIVDHAEID 150 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCCeEEEeccCC---CHHHHHHHHhccCCC
Confidence 56888887766655554 478899999888764 4467776788999999888776553 567778888888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
++++...
T Consensus 151 ~v~~~~~ 157 (660)
T PLN02430 151 FVFVQDK 157 (660)
T ss_pred EEEECHH
Confidence 7776543
No 204
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.51 E-value=1.2e+02 Score=28.91 Aligned_cols=80 Identities=11% Similarity=0.151 Sum_probs=58.0
Q ss_pred EEeHHHHHHHHHHHHHH----hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 19 KMSHAAVTSLCRSMKLA----CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
.+|...+...+..+... .++.++|++..+.+-. ..+...++..+..|+..+..+|.. .+..+.+.+++.++
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~ 122 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNL--LQYPIALFGILRAGMIVVNVNPLY---TPRELEHQLNDSGA 122 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEeccCccC---CHHHHHHHHHhcCc
Confidence 57788777666555554 4677889998886643 456666788999999999887653 46778889999888
Q ss_pred eeEEecccc
Q psy14342 95 RDTFCSYGM 103 (316)
Q Consensus 95 t~~~~~~~~ 103 (316)
..+.+....
T Consensus 123 ~~ii~~~~~ 131 (560)
T PRK08974 123 KAIVIVSNF 131 (560)
T ss_pred eEEEEeccc
Confidence 877665443
No 205
>PRK07798 acyl-CoA synthetase; Validated
Probab=49.11 E-value=1.4e+02 Score=28.00 Aligned_cols=79 Identities=6% Similarity=0.013 Sum_probs=56.9
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+...+ ++.++|++..+.+- ...+...++..+..|+..+..++.. .+..+...+++.++.
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n--~~~~~~~~~a~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~ 102 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARN--RIEYVEAMLGAFKARAVPVNVNYRY---VEDELRYLLDDSDAV 102 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHhcCeEEEecCcCC---CHHHHHHHHhhcCCC
Confidence 688888877766655544 67889988888653 4466666788899999888876552 456777888888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
.++....
T Consensus 103 ~~~~~~~ 109 (533)
T PRK07798 103 ALVYERE 109 (533)
T ss_pred EEEEchh
Confidence 6665443
No 206
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=49.04 E-value=1.2e+02 Score=27.77 Aligned_cols=63 Identities=10% Similarity=0.057 Sum_probs=46.8
Q ss_pred HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceeeEEeccc
Q psy14342 35 ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCSYG 102 (316)
Q Consensus 35 ~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 102 (316)
..++..+|++..+.+-. ..++..++..+..|+..+..++.. .+..+...+++.++...+....
T Consensus 18 ~~g~~~gd~v~i~~~~~--~~~~~~~la~~~~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 18 AQGIRSGSRVALVGQNS--IEMVLLLHACLLLGAEIAMLNTRL---TENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HhCCCCCCEEEEEcCCC--HHHHHHHHHHHhcCcEEEecCcCC---CHHHHHHHHHhcCCCEEEEcCc
Confidence 35788999999987654 456665788999999998887653 4566778888888887665543
No 207
>PRK05850 acyl-CoA synthetase; Validated
Probab=48.93 E-value=1.3e+02 Score=28.79 Aligned_cols=84 Identities=2% Similarity=-0.024 Sum_probs=58.5
Q ss_pred EEEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|...+...+..+...+ + .++|++..+++-.. .++..++..+..|+.++..++......+..+...+++.++
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~ 110 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL--EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSP 110 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCC
Confidence 4688888877666555544 3 47899888887543 5666578889999999987653212245677888889988
Q ss_pred eeEEecccch
Q psy14342 95 RDTFCSYGML 104 (316)
Q Consensus 95 t~~~~~~~~~ 104 (316)
.++++.....
T Consensus 111 ~~il~~~~~~ 120 (578)
T PRK05850 111 SVVLTTSAVV 120 (578)
T ss_pred CEEEEcHHHH
Confidence 8777665443
No 208
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=48.86 E-value=1.1e+02 Score=28.64 Aligned_cols=78 Identities=12% Similarity=0.001 Sum_probs=55.5
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++..+.+-. ..+...++..+..|+.++..++.. .+..+...++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~--~~~~~~~~a~~~~G~~~~~~~~~~---~~~~~~~~~~~~~~~ 101 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMS--PEMLATFLGAVKAGHAYIPVDVSS---PAERIEMIIEVAKPS 101 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCCEEecCCCCC---hHHHHHHHHHhcCCC
Confidence 47888887766655543 4567789998887643 355565788899999888776553 456677788888888
Q ss_pred eEEecc
Q psy14342 96 DTFCSY 101 (316)
Q Consensus 96 ~~~~~~ 101 (316)
..++..
T Consensus 102 ~~~~~~ 107 (503)
T PRK04813 102 LIIATE 107 (503)
T ss_pred EEEecc
Confidence 776643
No 209
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=48.48 E-value=1.6e+02 Score=27.71 Aligned_cols=80 Identities=14% Similarity=0.181 Sum_probs=57.3
Q ss_pred EEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|..++...+..+.. ..++.+++++....+ +...++..++..+..|+..+..++.. ++..+...+++.++.
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~--~~~~~~~~~~a~~~~G~~~v~l~~~~---~~~~l~~~~~~~~~~ 104 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRRLGVKREERVLLLML--DGVDFPIAFLGAIRAGIVPVALNTLL---TADDYAYMLEDSRAR 104 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC--CCHHHHHHHHHHHHcCcEEeeccCCC---CHHHHHHHHHhcCCe
Confidence 4777777666555444 346788898887755 34567766888999999988876652 467788889898888
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
.++.....
T Consensus 105 ~~i~~~~~ 112 (508)
T TIGR02262 105 VVFVSGEL 112 (508)
T ss_pred EEEEchhh
Confidence 77665443
No 210
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.34 E-value=1.2e+02 Score=28.96 Aligned_cols=80 Identities=11% Similarity=-0.014 Sum_probs=57.0
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++..+.|-.. .++..++..+..|+.++..++.. .+..+..++++.++.
T Consensus 39 ~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~ 113 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGY--RHLEAYYGVSGSGAVCHTINPRL---FPEQIAYIVNHAEDR 113 (539)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccc---CHHHHHHHHhccCCc
Confidence 47888887766555543 47889999998876543 55555788888999998887652 466777788888877
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
..++.+.+
T Consensus 114 ~~~~~~~~ 121 (539)
T PRK07008 114 YVLFDLTF 121 (539)
T ss_pred EEEEcchh
Confidence 66655443
No 211
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.22 E-value=1.3e+02 Score=28.66 Aligned_cols=79 Identities=6% Similarity=0.018 Sum_probs=55.9
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+...+ ++..+|++..+++-.. .++..++..+..|+..+..+|.. ....+...++..+++
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~vpi~p~~---~~~~l~~~l~~~~~~ 123 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCP--QAVIGYYGTLLAGGIVVQTNPLY---TERELEYQLHDSGAK 123 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCh--HHHHHHHHHHHcCeEEeccCccc---CHHHHHHHHhccCCe
Confidence 467777776666555543 6778899998877544 45555788889998888776653 456777888888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
..++...
T Consensus 124 ~ii~~~~ 130 (563)
T PRK06710 124 VILCLDL 130 (563)
T ss_pred EEEEecc
Confidence 7766543
No 212
>PRK06060 acyl-CoA synthetase; Validated
Probab=47.02 E-value=1.1e+02 Score=30.27 Aligned_cols=77 Identities=14% Similarity=0.125 Sum_probs=55.5
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.|...+..+... .++.++|++..+++-.. .++..++..+..|+..+..+|.. .+.++...+++.++.
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~--~~~~~~la~~~aG~~~vpi~p~~---~~~~l~~~l~~~~~~ 104 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSP--DLVQLLLACLARGVMAFLANPEL---HRDDHALAARNTEPA 104 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCcEEEecCCCC---CHHHHHHHHhcCCCc
Confidence 47888887766555443 46889999999877544 56666889999999888877653 455667778888877
Q ss_pred eEEec
Q psy14342 96 DTFCS 100 (316)
Q Consensus 96 ~~~~~ 100 (316)
.+++.
T Consensus 105 ~vi~~ 109 (705)
T PRK06060 105 LVVTS 109 (705)
T ss_pred EEEEc
Confidence 66554
No 213
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=46.89 E-value=1.4e+02 Score=27.66 Aligned_cols=77 Identities=9% Similarity=0.030 Sum_probs=55.6
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|++.+...+..+...+ ++.++|++..+.+-.. .++..++..+..|+.++..++.. .+......+++.++.
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~--~~~~~~la~~~~G~~~v~~~~~~---~~~~~~~~~~~~~~~ 102 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSP--ETLLAYLALLQCGARVLPLNPQL---PQPLLEELLPSLTLD 102 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCEEeecCCCC---CHHHHHHHHHhcCCC
Confidence 578888877776665544 6788999988876543 45555788889999999887653 456677788888877
Q ss_pred eEEec
Q psy14342 96 DTFCS 100 (316)
Q Consensus 96 ~~~~~ 100 (316)
..+..
T Consensus 103 ~~i~~ 107 (458)
T PRK09029 103 FALVL 107 (458)
T ss_pred EEEEc
Confidence 66543
No 214
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=45.69 E-value=1.6e+02 Score=27.99 Aligned_cols=77 Identities=10% Similarity=0.131 Sum_probs=55.3
Q ss_pred EEeHHHHHHHHHHHHH---HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKL---ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..++. ..++.++|++...++-.. .++..++..+..|+.++...|.. .+..+...+++.++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~i~~~~~~ 120 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTP--DHPINFFGALKAGARVVHLSPLD---GERALSHKLSDSGAR 120 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCh--HHHHHHHHHHhcCeEEEecCCCC---CHHHHHHHHhhcCce
Confidence 5788877666555444 346889999988877543 44455778888999999877653 466788888888888
Q ss_pred eEEec
Q psy14342 96 DTFCS 100 (316)
Q Consensus 96 ~~~~~ 100 (316)
.+++.
T Consensus 121 ~vi~~ 125 (541)
T TIGR03205 121 LLITS 125 (541)
T ss_pred EEEEe
Confidence 76654
No 215
>PHA02553 6 baseplate wedge subunit; Provisional
Probab=45.48 E-value=47 Score=32.31 Aligned_cols=69 Identities=10% Similarity=-0.066 Sum_probs=48.2
Q ss_pred CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC-------CcEEEEEEecCCchhhcchHHHHHHHHHH
Q psy14342 200 RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT-------NLLVVVVELDGNESEALDLVPLVTNAVLE 268 (316)
Q Consensus 200 ~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~~~l~~ 268 (316)
.-|.-......+.-|.+++-|....+.+|+|..+.++... +.+.+++.++........+++.+++.|.+
T Consensus 301 r~~AP~~~rt~~RAVTa~DYE~lA~~~~p~V~rA~~~~~~~~spp~~G~V~VvVvP~~g~~ls~~l~~~I~~yL~~ 376 (611)
T PHA02553 301 RELAPRMREAQRRAVTASDYEAFVSERFGSIVQAVQCGGDSLKPPVYGYVFIAVKPKSGLYLTDVQKEDIKNYLKK 376 (611)
T ss_pred HHhhhHhhhcccccccHHHHHHHHHhhCCccEEEEEccCCcCCCCCCceEEEEEecCCCCCCCHHHHHHHHHHHHh
Confidence 3344455667778899999999998868999888776531 34555555554444445788888888874
No 216
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=45.38 E-value=1.5e+02 Score=27.60 Aligned_cols=78 Identities=12% Similarity=0.050 Sum_probs=55.9
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++..+.|-.. .++..++..+..|+..+..++.. .+......+++.++.
T Consensus 27 ~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~--~~~~~~la~~~~G~~~v~i~~~~---~~~~~~~~~~~~~~~ 101 (483)
T PRK03640 27 KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGM--EMILVIHALQQLGAVAVLLNTRL---SREELLWQLDDAEVK 101 (483)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHhCCcEEEecCcCC---CHHHHHHHHHhCCCC
Confidence 57888887666555443 46778999998877654 45555789999999999887652 456677788888777
Q ss_pred eEEecc
Q psy14342 96 DTFCSY 101 (316)
Q Consensus 96 ~~~~~~ 101 (316)
..+...
T Consensus 102 ~vi~~~ 107 (483)
T PRK03640 102 CLITDD 107 (483)
T ss_pred EEEEcc
Confidence 665543
No 217
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=45.37 E-value=84 Score=20.42 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=36.5
Q ss_pred cChHhHHHHHHHhccccceeEEEeeCCcEEEEEEecCCchhhcchHHHHHHHHHHhcCe
Q psy14342 214 YHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHL 272 (316)
Q Consensus 214 v~p~eIE~~l~~~~p~v~~~~v~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~ 272 (316)
-...++++.|.+ +|+|.+|..+.-...+.+.+... +.+++.+.+...+..-.+.
T Consensus 10 ~~~~~~~~~l~~-~p~V~~~~~vtG~~d~~~~v~~~----d~~~l~~~i~~~l~~~~gV 63 (74)
T PF01037_consen 10 DAYDEFAEALAE-IPEVVECYSVTGEYDLILKVRAR----DMEELEEFIREKLRSIPGV 63 (74)
T ss_dssp THHHHHHHHHHT-STTEEEEEEESSSSSEEEEEEES----SHHHHHHHHHHTHHTSTTE
T ss_pred chHHHHHHHHHc-CCCEEEEEEEeCCCCEEEEEEEC----CHHHHHHHHHHHhhcCCCE
Confidence 457889999999 99999988887766666666554 3345666666655533333
No 218
>PRK06188 acyl-CoA synthetase; Validated
Probab=45.35 E-value=1.4e+02 Score=28.24 Aligned_cols=79 Identities=8% Similarity=-0.015 Sum_probs=56.8
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++..+.+- ...++..++..+..|+..+..++.. .+......+...+++
T Consensus 37 ~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~--~~~~~~~~la~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~~ 111 (524)
T PRK06188 37 RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLN--RPEVLMAIGAAQLAGLRRTALHPLG---SLDDHAYVLEDAGIS 111 (524)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--CHHHHHHHHHHHHhCCEEEecccCC---CHHHHHHHHHhcCce
Confidence 57888877665554443 467889999888764 4456666788999999999887653 456677788888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
.+...+.
T Consensus 112 ~~~~~~~ 118 (524)
T PRK06188 112 TLIVDPA 118 (524)
T ss_pred EEEEecc
Confidence 7766554
No 219
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=45.04 E-value=1.3e+02 Score=28.55 Aligned_cols=77 Identities=9% Similarity=-0.026 Sum_probs=54.8
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+... .++.++|++..+++- ...++..++..+..|+..+...+.. .+..+...+++.++.
T Consensus 48 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~--~~~~~~~~la~~~~G~~~v~~~~~~---~~~~~~~~l~~~~~~ 122 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPN--IAEFYIVFFALLKLGIAPVLALFSH---RKSELTAYAQQIEPA 122 (527)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHcCeEEecccccc---CHHHHHHHHHhcCCc
Confidence 58888887766655554 468889999888764 4466666888999999877655432 456677788888877
Q ss_pred eEEec
Q psy14342 96 DTFCS 100 (316)
Q Consensus 96 ~~~~~ 100 (316)
.+.+.
T Consensus 123 ~li~~ 127 (527)
T TIGR02275 123 LYIID 127 (527)
T ss_pred EEEEc
Confidence 66554
No 220
>PRK05852 acyl-CoA synthetase; Validated
Probab=44.73 E-value=1.2e+02 Score=28.70 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=55.1
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++...++- ...++..++..+..|+..+..++.. ++..+...++..++.
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~ 117 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGS--NAEFVVALLAASRADLVVVPLDPAL---PIAEQRVRSQAAGAR 117 (534)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCC--cHHHHHHHHHHHHcCcEEeecCCCC---CcHHHHHHHHhCCCC
Confidence 47888777665554443 467899999888664 3466666888999999999887653 456777888888888
Q ss_pred eEEe
Q psy14342 96 DTFC 99 (316)
Q Consensus 96 ~~~~ 99 (316)
.+++
T Consensus 118 ~ii~ 121 (534)
T PRK05852 118 VVLI 121 (534)
T ss_pred EEEE
Confidence 7664
No 221
>PLN02479 acetate-CoA ligase
Probab=44.69 E-value=1.5e+02 Score=28.51 Aligned_cols=80 Identities=10% Similarity=0.030 Sum_probs=58.7
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...|...+..+...+ ++.++|++....+- ...++..++..+..|+..+..++.. ........+++.++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n--~~~~~~~~la~~~~G~v~v~l~~~~---~~~~l~~~l~~~~~~ 119 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPN--IPAMYEAHFGVPMAGAVVNCVNIRL---NAPTIAFLLEHSKSE 119 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHhCCcEEEEecccc---CHHHHHHHHhhcCce
Confidence 578888777666655544 78899999888774 3456666788889999888877653 456778888999988
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
.+++....
T Consensus 120 ~ii~~~~~ 127 (567)
T PLN02479 120 VVMVDQEF 127 (567)
T ss_pred EEEEchhh
Confidence 77765443
No 222
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=44.50 E-value=18 Score=35.24 Aligned_cols=28 Identities=11% Similarity=0.164 Sum_probs=25.7
Q ss_pred CCcccceeEECCcccChHhHHHHHHHhc
Q psy14342 200 RLALDETIMLRGMRYHPIDIENSVMRAH 227 (316)
Q Consensus 200 ~GR~dd~i~~~G~~v~p~eIE~~l~~~~ 227 (316)
++|.+.+..+.|+|..-.++-.++.++.
T Consensus 444 v~R~~~~lsi~gEK~tE~~l~~Av~~a~ 471 (612)
T PLN02620 444 ICRKNVVLSIDSDKTDEVELQNAVKNAV 471 (612)
T ss_pred EeecCceeecccccCCHHHHHHHHHHHH
Confidence 8999999999999999999999998843
No 223
>PRK13390 acyl-CoA synthetase; Provisional
Probab=44.28 E-value=1.5e+02 Score=27.74 Aligned_cols=77 Identities=14% Similarity=-0.007 Sum_probs=55.0
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++....+-.. .++..++..+..|+..+...+.. .+..+..+++..++.
T Consensus 24 ~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~--~~~~~~la~~~~Ga~~~~l~~~~---~~~~~~~~~~~~~~~ 98 (501)
T PRK13390 24 QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSP--EALVVLWAALRSGLYITAINHHL---TAPEADYIVGDSGAR 98 (501)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH--HHHHHHHHHHHhCCEEeccccCC---CHHHHHHHHHhcCCc
Confidence 68999887776665554 46889999988876543 55555788999999888776542 456677777777777
Q ss_pred eEEec
Q psy14342 96 DTFCS 100 (316)
Q Consensus 96 ~~~~~ 100 (316)
.++..
T Consensus 99 ~~i~~ 103 (501)
T PRK13390 99 VLVAS 103 (501)
T ss_pred EEEEc
Confidence 65543
No 224
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.85 E-value=1.4e+02 Score=28.37 Aligned_cols=79 Identities=10% Similarity=-0.011 Sum_probs=55.8
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++..+++- ...++..++..+..|+..+...+.. .+..+...+++.++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~--~~~~~~~~~a~~~~G~~~vpl~~~~---~~~~~~~~l~~~~~~ 116 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLN--RTEFVESVLAANMLGAIAVPVNFRL---TPPEIAFLVSDCGAH 116 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--CHHHHHHHHHHHHcCeEEEEcCccC---CHHHHHHHHHhCCCc
Confidence 47777776665554443 368889999888764 3355666788889999998776542 456777888888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
..+....
T Consensus 117 ~ii~~~~ 123 (542)
T PRK07786 117 VVVTEAA 123 (542)
T ss_pred EEEEccc
Confidence 7666544
No 225
>PRK09192 acyl-CoA synthetase; Validated
Probab=43.79 E-value=1.8e+02 Score=28.03 Aligned_cols=84 Identities=11% Similarity=0.024 Sum_probs=57.8
Q ss_pred EEEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc----ChHHHHHHH
Q psy14342 17 GIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV----NPALWLSAV 89 (316)
Q Consensus 17 ~V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~----~~~~~~~~~ 89 (316)
.-.+|...+...+..+... .++.++|++..+++-. ..++..++..+..|+..+..++..-.. .++.+...+
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i 124 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETD--GDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGML 124 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCc--hhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHH
Confidence 3468888887665555444 4788999999988753 355555788999999988875421111 146677888
Q ss_pred hccceeeEEeccc
Q psy14342 90 SQYRVRDTFCSYG 102 (316)
Q Consensus 90 ~~~~~t~~~~~~~ 102 (316)
++.++..++....
T Consensus 125 ~~~~~~~il~~~~ 137 (579)
T PRK09192 125 ASAQPAAIITPDE 137 (579)
T ss_pred HhcCCCEEEeChH
Confidence 8888887766543
No 226
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.46 E-value=2.5e+02 Score=27.01 Aligned_cols=82 Identities=5% Similarity=-0.047 Sum_probs=58.8
Q ss_pred EEEeHHHHHHHHHHHHHH----hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccc
Q psy14342 18 IKMSHAAVTSLCRSMKLA----CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 93 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
-.+|...+...+..+... .++.++|++....+-.. .++..++..+..|+..+..++.. .+..+...++..+
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~--e~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~ 111 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCA--EHLEVLFAVACMGAVFNPLNKQL---MNDQIVHIINHAE 111 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCH--HHHHHHHHHHhcCCEEeeccccc---CHHHHHHHHhccC
Confidence 467888887666555543 46778899888876433 45555788899999888887653 4567788888888
Q ss_pred eeeEEecccch
Q psy14342 94 VRDTFCSYGML 104 (316)
Q Consensus 94 ~t~~~~~~~~~ 104 (316)
+..+++.....
T Consensus 112 ~~~~i~~~~~~ 122 (576)
T PRK05620 112 DEVIVADPRLA 122 (576)
T ss_pred CcEEEEChhhH
Confidence 88777665443
No 227
>PLN02574 4-coumarate--CoA ligase-like
Probab=41.38 E-value=1.8e+02 Score=27.85 Aligned_cols=79 Identities=19% Similarity=0.142 Sum_probs=55.4
Q ss_pred EEeHHHHHHHHHHHHH---H-hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 19 KMSHAAVTSLCRSMKL---A-CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~---~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
.+|...+...+..+.. . .++.++|++..+.+-.. .+...++..+..|+..+..+|.. .+..+...+++.++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~p~~---~~~~l~~~l~~~~~ 140 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV--YFPVIFLAVLSLGGIVTTMNPSS---SLGEIKKRVVDCSV 140 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc--hHHHHHHHHHHhCeEEeCcCccc---CHHHHHHHHHhcCC
Confidence 4677777655544443 2 67889999999877443 45555788999999998877653 45677778888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
..++..+.
T Consensus 141 ~~~~~~~~ 148 (560)
T PLN02574 141 GLAFTSPE 148 (560)
T ss_pred EEEEECHH
Confidence 76665544
No 228
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=41.24 E-value=1.9e+02 Score=25.14 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=35.7
Q ss_pred cccceeEECCcccChHhHHHHHHHhccccceeEEEeeC---CcEEEEEEec
Q psy14342 202 ALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT---NLLVVVVELD 249 (316)
Q Consensus 202 R~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~---~~~~~~v~~~ 249 (316)
+..|-++..+.|.+.+.||++ +. -.+..|++|.+.+ +..++++...
T Consensus 82 ~~~dPL~F~d~k~Y~~rL~~a-~~-~tg~~davvtg~g~i~G~pvv~av~d 130 (294)
T COG0777 82 EPKDPLKFPDSKKYKDRLEAA-RK-KTGLDDAVVTGEGTINGLPVVLAVMD 130 (294)
T ss_pred CcCCcccCCcchhhHHHHHHH-Hh-hcCCCcceEEEeeEECCeEEEEEEEe
Confidence 667889999999999999999 55 6788899999885 3455544443
No 229
>PRK13391 acyl-CoA synthetase; Provisional
Probab=40.74 E-value=2.5e+02 Score=26.42 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=58.0
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+...+ ++.+++++..+.+-.. .++..++..+..|+..+..++.. .+..+...+++.++.
T Consensus 24 ~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~--~~~~~~~a~~~~G~~~~~l~~~~---~~~~l~~~l~~~~~~ 98 (511)
T PRK13391 24 VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNL--RYLEVCWAAERSGLYYTCVNSHL---TPAEAAYIVDDSGAR 98 (511)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHhccEEecccccc---CHHHHHHHHhccCCc
Confidence 488888877766655544 6788999988877544 55555788889999888776542 466778888888888
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
.+++....
T Consensus 99 ~li~~~~~ 106 (511)
T PRK13391 99 ALITSAAK 106 (511)
T ss_pred EEEEchhh
Confidence 76665443
No 230
>PRK08308 acyl-CoA synthetase; Validated
Probab=40.71 E-value=2e+02 Score=26.11 Aligned_cols=77 Identities=10% Similarity=0.100 Sum_probs=53.1
Q ss_pred EEeHHHHHHHHHHHHH--HhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceee
Q psy14342 19 KMSHAAVTSLCRSMKL--ACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRD 96 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~--~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~ 96 (316)
.+|...+...+..+.. ..++.+++++..+.+- ...++..++..+..|+..+..++.. .+.....++++.++..
T Consensus 8 ~~ty~el~~~~~~~a~~l~~~~~~g~~V~i~~~~--~~~~~~~~la~~~~G~~~v~l~~~~---~~~~~~~~~~~~~~~~ 82 (414)
T PRK08308 8 EYSKSDFDLRLQRYEEMEQFQEAAGNRFAVCLKD--PFDIITLVFFLKEKGASVLPIHPDT---PKEAAIRMAKRAGCHG 82 (414)
T ss_pred eecHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--ChHHHHHHHHHHHCCeEEEecCCCC---CHHHHHHHHHhCCCCE
Confidence 5778877665544333 3457788988888664 3466666788888999999887653 4456677778887776
Q ss_pred EEec
Q psy14342 97 TFCS 100 (316)
Q Consensus 97 ~~~~ 100 (316)
++..
T Consensus 83 ~i~~ 86 (414)
T PRK08308 83 LLYG 86 (414)
T ss_pred EEec
Confidence 6543
No 231
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=40.42 E-value=1.9e+02 Score=27.36 Aligned_cols=79 Identities=8% Similarity=-0.031 Sum_probs=55.7
Q ss_pred EEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|...+...+..+... .++.++|++....+-.. .++..++..+..|+.++...+.. .+..+...++..++
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~ 126 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRW--EFTALYLACARIGAVLNPLMPIF---RERELSFMLNHADS 126 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHhcCEEEeccCccc---CHHHHHHHHHhcCC
Confidence 468888877665554443 46788999988876433 44454788889999888776542 46677888888888
Q ss_pred eeEEecc
Q psy14342 95 RDTFCSY 101 (316)
Q Consensus 95 t~~~~~~ 101 (316)
..+++..
T Consensus 127 ~~li~~~ 133 (538)
T TIGR03208 127 KVFVVPS 133 (538)
T ss_pred eEEEEcc
Confidence 8766544
No 232
>PRK13382 acyl-CoA synthetase; Provisional
Probab=40.35 E-value=2e+02 Score=27.33 Aligned_cols=79 Identities=13% Similarity=0.111 Sum_probs=57.7
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+... .++.++|++...++- ...++..++..+..|+.++..++.. ....+...+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~vpl~~~~---~~~~l~~~l~~~~~~ 142 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRN--HRGFVEALLAANRIGADILLLNTSF---AGPALAEVVTREGVD 142 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecC--cHHHHHHHHHHHHcCcEEEecCccc---CHHHHHHHHHhcCCC
Confidence 57888777766665554 467889999888764 3456666888999999999887653 456777888888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
.+++...
T Consensus 143 ~vi~~~~ 149 (537)
T PRK13382 143 TVIYDEE 149 (537)
T ss_pred EEEEchh
Confidence 7766543
No 233
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=39.37 E-value=1.9e+02 Score=27.01 Aligned_cols=78 Identities=12% Similarity=-0.019 Sum_probs=55.3
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.|...+..+...+ ++.++|++....+.. ..+...++..+..|+.++..++.. ....+...+++.++.
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~--~~~~~~~la~~~~G~~~v~~~~~~---~~~~~~~~~~~~~~~ 99 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHME--PHMLVAFLGSIKSGHAYIPVDTSI---PSERIEMIIEAAGPE 99 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCC--HHHHHHHHHHHHhCCEEeCCCCcC---hHHHHHHHHHhcCCC
Confidence 688888877766655544 577888887776653 355555788999999888776552 345677888888888
Q ss_pred eEEecc
Q psy14342 96 DTFCSY 101 (316)
Q Consensus 96 ~~~~~~ 101 (316)
.++...
T Consensus 100 ~ii~~~ 105 (502)
T TIGR01734 100 LVIHTA 105 (502)
T ss_pred EEEecc
Confidence 766644
No 234
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=38.91 E-value=2.4e+02 Score=28.03 Aligned_cols=81 Identities=6% Similarity=-0.017 Sum_probs=60.0
Q ss_pred EEEEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccc
Q psy14342 17 GIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYR 93 (316)
Q Consensus 17 ~V~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
...+|.+.+...+..+... .++.++|++..+++- ...++...+..+..|+..+...+.. .+..+...+++.+
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n--~~e~~~~~lA~~~~G~v~vpl~~~~---~~~~l~~il~~s~ 193 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEET--RWEWLASIYGIWSQSMVAATVYANL---GEDALAYALRETE 193 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCC--CHHHHHHHHHHHHcCCeEEeeCCCC---CHHHHHhhhhccC
Confidence 5688999887776665554 478899999888764 4467776788889999888765542 4667778888888
Q ss_pred eeeEEeccc
Q psy14342 94 VRDTFCSYG 102 (316)
Q Consensus 94 ~t~~~~~~~ 102 (316)
+.++++...
T Consensus 194 ~~~lv~~~~ 202 (700)
T PTZ00216 194 CKAIVCNGK 202 (700)
T ss_pred ccEEEECHH
Confidence 887776544
No 235
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=38.90 E-value=67 Score=20.21 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=21.5
Q ss_pred ChHhHHHHHHHhccccceeEEEeeCCcEEEEE
Q psy14342 215 HPIDIENSVMRAHKKIAECAVFTWTNLLVVVV 246 (316)
Q Consensus 215 ~p~eIE~~l~~~~p~v~~~~v~~~~~~~~~~v 246 (316)
....||++|.+ .|+|..+.+--..+.+.+..
T Consensus 12 C~~~v~~~l~~-~~GV~~v~vd~~~~~v~v~~ 42 (62)
T PF00403_consen 12 CAKKVEKALSK-LPGVKSVKVDLETKTVTVTY 42 (62)
T ss_dssp HHHHHHHHHHT-STTEEEEEEETTTTEEEEEE
T ss_pred HHHHHHHHHhc-CCCCcEEEEECCCCEEEEEE
Confidence 45789999999 99997655544445555544
No 236
>PRK07787 acyl-CoA synthetase; Validated
Probab=35.54 E-value=2.5e+02 Score=26.03 Aligned_cols=76 Identities=14% Similarity=0.202 Sum_probs=55.9
Q ss_pred EEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceeeEE
Q psy14342 19 KMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTF 98 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~~~ 98 (316)
.+|.+.+...+..+...+. ++|++....+- ...++..++..+..|+..+..++.. .+..+...+++.++..++
T Consensus 25 ~~Ty~el~~~~~~~a~~L~--~~~~V~l~~~~--~~~~~~~~la~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~~il 97 (471)
T PRK07787 25 VLSRSDLAGAATAVAERVA--GARRVAVLATP--TLATVLAVVGALIAGVPVVPVPPDS---GVAERRHILADSGAQAWL 97 (471)
T ss_pred EEEHHHHHHHHHHHHHHhc--cCCEEEEECCC--CHHHHHHHHHHHhcCcEEeecCCCC---ChHHHHHHHHhcCCCEEE
Confidence 4788888877777766653 66888777654 3566666888999999998877653 466778888888888776
Q ss_pred ecc
Q psy14342 99 CSY 101 (316)
Q Consensus 99 ~~~ 101 (316)
...
T Consensus 98 ~~~ 100 (471)
T PRK07787 98 GPA 100 (471)
T ss_pred ecC
Confidence 643
No 237
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.16 E-value=3e+02 Score=26.87 Aligned_cols=82 Identities=10% Similarity=0.195 Sum_probs=54.4
Q ss_pred EEEeHHHHHHHHHHHHHHhc--CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeee-CCcccccChHHHHHHHhccce
Q psy14342 18 IKMSHAAVTSLCRSMKLACE--LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILI-PPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~~~~~~~~~~~ 94 (316)
..+|.+.+...+..+...+. +.++|++...++-. ..++..++..+..|+.++.. .+.. ...+.++...+++.++
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~--~e~~~~~lA~~~~G~v~vpl~~~~~-~~~~~~l~~~l~~~~~ 130 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQN--LDYLIAFFGALYAGRIAVPLFDPAE-PGHVGRLHAVLDDCTP 130 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEeeCCCCc-cchHHHHHHHHHhCCC
Confidence 46889888776665554442 57889998887654 35666678889999987765 2221 1113556778888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
..+++...
T Consensus 131 ~~vi~~~~ 138 (631)
T PRK07769 131 SAILTTTD 138 (631)
T ss_pred CEEEEChH
Confidence 76665543
No 238
>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress).
Probab=33.12 E-value=37 Score=25.18 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=19.0
Q ss_pred ceeEECCcccChHhHHHHHHHh
Q psy14342 205 ETIMLRGMRYHPIDIENSVMRA 226 (316)
Q Consensus 205 d~i~~~G~~v~p~eIE~~l~~~ 226 (316)
...+++|.++++.+||.-|.+.
T Consensus 50 ~~y~Igg~~~SL~dIe~~ILR~ 71 (117)
T PF04784_consen 50 VRYNIGGQRFSLDDIEHGILRG 71 (117)
T ss_pred eEEEECCEEecHHHHHHhhccC
Confidence 4556899999999999999983
No 239
>PRK07867 acyl-CoA synthetase; Validated
Probab=32.84 E-value=2.8e+02 Score=26.30 Aligned_cols=79 Identities=14% Similarity=0.099 Sum_probs=56.2
Q ss_pred EEeHHHHHHHHHHHHHHh----cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccce
Q psy14342 19 KMSHAAVTSLCRSMKLAC----ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRV 94 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~----~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
.+|...+...+..+...+ ++.+++++..+.+- ...++..++..+..|+.++..++.. .+..+...+++.++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~ 102 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDN--TPEFSLLLGAAALSGIVPVGLNPTR---RGAALARDIAHADC 102 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCC--CHHHHHHHHHHHhcCCEEEEecCCC---ChHHHHHHHHhCCC
Confidence 578888777666655544 45667877777663 4466666889999999999877653 56677888888888
Q ss_pred eeEEeccc
Q psy14342 95 RDTFCSYG 102 (316)
Q Consensus 95 t~~~~~~~ 102 (316)
.++++...
T Consensus 103 ~~li~~~~ 110 (529)
T PRK07867 103 QLVLTESA 110 (529)
T ss_pred eEEEECHh
Confidence 87766543
No 240
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=32.71 E-value=2.1e+02 Score=30.74 Aligned_cols=79 Identities=10% Similarity=0.019 Sum_probs=57.5
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.|...+..+... .++.++|++..+++-+ ..++..++..+..|+..+..++.. ...+...+++..++.
T Consensus 483 ~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~--~~~i~~~la~~~~G~~~vpld~~~---p~~~~~~~l~~~~~~ 557 (1296)
T PRK10252 483 QFSYREMREQVVALANLLRERGVKPGDSVAVALPRS--VFLTLALHAIVEAGAAWLPLDTGY---PDDRLKMMLEDARPS 557 (1296)
T ss_pred cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC--HHHHHHHHHHHHhCCEEEecCccC---HHHHHHHHHHhCCCC
Confidence 47888877666555544 4788899998887654 456666889999999999887653 345677788888888
Q ss_pred eEEeccc
Q psy14342 96 DTFCSYG 102 (316)
Q Consensus 96 ~~~~~~~ 102 (316)
++.....
T Consensus 558 ~~i~~~~ 564 (1296)
T PRK10252 558 LLITTAD 564 (1296)
T ss_pred EEEECcc
Confidence 7766544
No 241
>PF04865 Baseplate_J: Baseplate J-like protein; InterPro: IPR006949 The temperate bacteriophage P2 has four defined tail genes: V, J, W and I. Their order is the late gene promoter, VWJI, followed by the tail fibre genes H and G and then a transcription terminator. BAP V protein is the small spike at the tip of the tail and basal plate assembly protein J lies at the edge of the baseplate []. This family also includes a number of bacterial homologues, which are thought to have been horizontally transferred.
Probab=30.51 E-value=1.8e+02 Score=24.38 Aligned_cols=66 Identities=15% Similarity=0.088 Sum_probs=45.2
Q ss_pred CCcccceeEECCcccChHhHHHHHHHhccccceeEEEeeC---CcEEEEEEecCCchhhcchHHHHHHHH
Q psy14342 200 RLALDETIMLRGMRYHPIDIENSVMRAHKKIAECAVFTWT---NLLVVVVELDGNESEALDLVPLVTNAV 266 (316)
Q Consensus 200 ~GR~dd~i~~~G~~v~p~eIE~~l~~~~p~v~~~~v~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~l 266 (316)
.-|....+.....-.....+|...++.+|+|..+.++... ..+.+++....+ ....++++.+++.+
T Consensus 105 r~R~~~~~~~~~~~gt~~dy~~~a~~~~~gV~~v~v~~~~~~~G~V~v~v~~~~g-~~~~~l~~~V~~~i 173 (243)
T PF04865_consen 105 RARILESLRSPSRAGTADDYEYWALSVSPGVADVKVYPNWNGPGTVDVYVLGANG-APSQELLAAVQAYI 173 (243)
T ss_pred HHHHHHhhcccccCCCHHHHHHHHHHhCCCceEEEEecCCCCCCEEEEEEccCCC-CCCHHHHHHHHHHh
Confidence 4455555555455568899999999934999999999882 345554444333 34467888888888
No 242
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=30.42 E-value=3.3e+02 Score=27.51 Aligned_cols=82 Identities=6% Similarity=0.061 Sum_probs=59.3
Q ss_pred EEEeHHHHHHHHHHHHHH------hcCCCC-----------CceEEecCCcCChhhhHHHHhhhhcCceeeeeCCccccc
Q psy14342 18 IKMSHAAVTSLCRSMKLA------CELYPS-----------RHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEV 80 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~~~------~~~~~~-----------d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~ 80 (316)
..+|.+.+...+..+... .++.++ |++..+.+- ...|+...+..+..|+..|...+..
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N--~~ew~~~~lA~~~~Gav~Vpl~~~~--- 164 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSN--SINWLVADLACMLSGVTTLVMHSKF--- 164 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCC--CHHHHHHHHHHHHcCCeEEEecCCC---
Confidence 468888877766554443 267777 788877664 3466666889999999999877653
Q ss_pred ChHHHHHHHhccceeeEEecccch
Q psy14342 81 NPALWLSAVSQYRVRDTFCSYGML 104 (316)
Q Consensus 81 ~~~~~~~~~~~~~~t~~~~~~~~~ 104 (316)
.+..+..++.+.++.++++....+
T Consensus 165 ~~~el~~il~~s~~~~lv~~~~~~ 188 (746)
T PTZ00342 165 SIDVIVDILNETKLEWLCLDLDLV 188 (746)
T ss_pred CHHHHHHHHhcCCCCEEEEcHHHH
Confidence 567888899999999877654443
No 243
>PF07538 ChW: Clostridial hydrophobic W; InterPro: IPR006637 This hydrophobic repeat is found in a number of Chlostridium proteins. It contains a conserved tryptophan residue.
Probab=29.71 E-value=33 Score=19.47 Aligned_cols=11 Identities=27% Similarity=0.268 Sum_probs=8.8
Q ss_pred ccCCCCCceEE
Q psy14342 8 SVSTTGMLAGI 18 (316)
Q Consensus 8 TSGTTG~PK~V 18 (316)
++||+|..|.+
T Consensus 16 ~aGt~G~~~rl 26 (36)
T PF07538_consen 16 TAGTTGQGLRL 26 (36)
T ss_pred ecccCCCCcEE
Confidence 68999988765
No 244
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=29.49 E-value=2.6e+02 Score=23.30 Aligned_cols=55 Identities=20% Similarity=0.318 Sum_probs=39.3
Q ss_pred EEEeHHHHHHHHHHHH---HH-hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeC
Q psy14342 18 IKMSHAAVTSLCRSMK---LA-CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 74 (316)
Q Consensus 18 V~~t~~~l~~~~~~~~---~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 74 (316)
..+|.+.+...+..+. .. .+++++|++...+|-. ..++..++..+..|+.++...
T Consensus 26 ~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~--~~~~~~~~a~~~~G~v~vp~n 84 (227)
T TIGR03089 26 VELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAH--WQTAVWLLAAWSTGVEVVLAG 84 (227)
T ss_pred EEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC--HHHHHHHHHHHHcCCEEEeCC
Confidence 4688888766554433 33 5889999999998743 355555788899998877653
No 245
>PRK06145 acyl-CoA synthetase; Validated
Probab=29.08 E-value=3.6e+02 Score=25.08 Aligned_cols=78 Identities=10% Similarity=-0.012 Sum_probs=53.9
Q ss_pred EEeHHHHHHHHHHHHHHh---cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLAC---ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|...+...+..+...+ ++.+++++..+.+- ...+...++..+..|+..+..++.. .+......+++.++.
T Consensus 27 ~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~--~~~~~~~~la~~~~G~~~v~l~~~~---~~~~~~~~l~~~~~~ 101 (497)
T PRK06145 27 EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKN--SAAFLELAFAASYLGAVFLPINYRL---AADEVAYILGDAGAK 101 (497)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--CHHHHHHHHHHHhcCcEEEeccccc---CHHHHHHHHHhcCCc
Confidence 477777776666555544 67788988888654 3455555788888998888776542 455677788888877
Q ss_pred eEEecc
Q psy14342 96 DTFCSY 101 (316)
Q Consensus 96 ~~~~~~ 101 (316)
.++...
T Consensus 102 ~~i~~~ 107 (497)
T PRK06145 102 LLLVDE 107 (497)
T ss_pred EEEEcc
Confidence 665543
No 246
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=28.66 E-value=2.2e+02 Score=28.37 Aligned_cols=78 Identities=13% Similarity=0.002 Sum_probs=54.4
Q ss_pred EEeHHHHHHHHHHHHHHhc--CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceee
Q psy14342 19 KMSHAAVTSLCRSMKLACE--LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRD 96 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~ 96 (316)
.+|.+.+...+..++..+. ..++|++...+|-+ ..++..++..+..|+..+...+.. .+..+...+++.++..
T Consensus 231 ~~Ty~el~~~~~~lA~~L~~~~~~gd~Val~~~n~--~e~~~~~lA~~~~G~v~vpl~~~~---~~~~l~~~l~~s~~~~ 305 (718)
T PRK08043 231 PDSYRKLLKKTLFVGRILEKYSVEGERIGLMLPNA--TISAAVIFGASLRRRIPAMMNYTA---GVKGLTSAITAAEIKT 305 (718)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCc--HHHHHHHHHHHHcCCcccccccCc---CHHHHHHHHHHcCCcE
Confidence 4788888776665555442 47899999988754 356666788888998877766542 4567777888888776
Q ss_pred EEecc
Q psy14342 97 TFCSY 101 (316)
Q Consensus 97 ~~~~~ 101 (316)
+++..
T Consensus 306 vi~~~ 310 (718)
T PRK08043 306 IFTSR 310 (718)
T ss_pred EEEcH
Confidence 66543
No 247
>PRK07638 acyl-CoA synthetase; Validated
Probab=26.07 E-value=4.4e+02 Score=24.49 Aligned_cols=78 Identities=6% Similarity=-0.032 Sum_probs=54.1
Q ss_pred EEeHHHHHHHHHHHHHHhc--CCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceee
Q psy14342 19 KMSHAAVTSLCRSMKLACE--LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRD 96 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~ 96 (316)
.+|...+...+..+...+. ...+|++...++- ...++..++..+..|+..+..++.. .+..+...+.+.++..
T Consensus 26 ~~Ty~~l~~~~~~~a~~L~~~~~~~~~v~i~~~~--~~~~~~~~la~~~~G~~~v~l~~~~---~~~~~~~~~~~~~~~~ 100 (487)
T PRK07638 26 VLTYKDWFESVCKVANWLNEKESKNKTIAILLEN--RIEFLQLFAGAAMAGWTCVPLDIKW---KQDELKERLAISNADM 100 (487)
T ss_pred EeeHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCC--CHHHHHHHHHHHHcCeEEEecCccC---CHHHHHHHHHhCCCCE
Confidence 5788887776666555442 1356777777654 4466666888999999999887653 4667778888888886
Q ss_pred EEecc
Q psy14342 97 TFCSY 101 (316)
Q Consensus 97 ~~~~~ 101 (316)
++...
T Consensus 101 vi~~~ 105 (487)
T PRK07638 101 IVTER 105 (487)
T ss_pred EEEec
Confidence 65544
No 248
>smart00728 ChW Clostridial hydrophobic, with a conserved W residue, domain.
Probab=25.45 E-value=38 Score=20.49 Aligned_cols=11 Identities=27% Similarity=0.129 Sum_probs=8.2
Q ss_pred ccCCCCCceEE
Q psy14342 8 SVSTTGMLAGI 18 (316)
Q Consensus 8 TSGTTG~PK~V 18 (316)
+|||||..+.+
T Consensus 17 ~aGT~G~~lri 27 (46)
T smart00728 17 IAGTVGQGLRI 27 (46)
T ss_pred EcccCCCCcee
Confidence 68899887644
No 249
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=25.05 E-value=3.3e+02 Score=28.79 Aligned_cols=79 Identities=18% Similarity=0.169 Sum_probs=56.8
Q ss_pred EEeHHHHHHHHHHHHHHh--cCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhccceee
Q psy14342 19 KMSHAAVTSLCRSMKLAC--ELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRD 96 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~~--~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t~ 96 (316)
.+|.+.+...+..+...+ .+.++|++...+|-.. .+...++..+..|+..+..++.. .++.....+++.+++.
T Consensus 641 ~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~~~~---~~~~~~~~l~~~~~~~ 715 (1146)
T PRK08633 641 ELSYGKALTGALALARLLKRELKDEENVGILLPPSV--AGALANLALLLAGKVPVNLNYTA---SEAALKSAIEQAQIKT 715 (1146)
T ss_pred cCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCch--HHHHHHHHHHHcCCEEEEeCCCc---CHHHHHHHHHHcCCCE
Confidence 578888877666555544 2578899998877544 55555788999999888777653 4667788888888887
Q ss_pred EEeccc
Q psy14342 97 TFCSYG 102 (316)
Q Consensus 97 ~~~~~~ 102 (316)
++....
T Consensus 716 vi~~~~ 721 (1146)
T PRK08633 716 VITSRK 721 (1146)
T ss_pred EEEcHH
Confidence 765543
No 250
>PF08002 DUF1697: Protein of unknown function (DUF1697); InterPro: IPR012545 This family contains many hypothetical bacterial proteins.; PDB: 2HIY_B.
Probab=24.99 E-value=3e+02 Score=21.02 Aligned_cols=61 Identities=11% Similarity=0.205 Sum_probs=33.4
Q ss_pred eEECCc-ccChHhHHHHHHHhccccceeEEEeeCCcEEEEEEecCCchhhcchHHHHHHHHHHhcCeee
Q psy14342 207 IMLRGM-RYHPIDIENSVMRAHKKIAECAVFTWTNLLVVVVELDGNESEALDLVPLVTNAVLEEHHLIV 274 (316)
Q Consensus 207 i~~~G~-~v~p~eIE~~l~~~~p~v~~~~v~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~~~~~ 274 (316)
||++|. +|.-.|+.+++.. . +..++..+--.+-++.- ...+.+++...|.+.+.+.++...
T Consensus 11 INVGG~nki~MaeLr~~l~~-~-Gf~~V~Tyi~SGNvvf~-----~~~~~~~l~~~ie~~l~~~fG~~v 72 (137)
T PF08002_consen 11 INVGGKNKIKMAELREALED-L-GFTNVRTYIQSGNVVFE-----SDRDPAELAAKIEKALEERFGFDV 72 (137)
T ss_dssp -SBTTBS---HHHHHHHHHH-C-T-EEEEEETTTTEEEEE-----ESS-HHHHHHHHHHHHHHH-TT--
T ss_pred eecCCCCcccHHHHHHHHHH-c-CCCCceEEEeeCCEEEe-----cCCChHHHHHHHHHHHHHhcCCCe
Confidence 678885 5899999999988 5 44444433332323322 123446788888888888777653
No 251
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=24.88 E-value=3.9e+02 Score=25.10 Aligned_cols=87 Identities=18% Similarity=0.209 Sum_probs=52.3
Q ss_pred CCCCceEEEEeHHHHHHHHHHHHHHhcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHh
Q psy14342 11 TTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVS 90 (316)
Q Consensus 11 TTG~PK~V~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~ 90 (316)
-+-.|--|++|..+-.+- . +...+-.++||.+++--|-++..-. ++ -..|..++-++-.+---+|+.+...++
T Consensus 151 ~~~~~~~IiiT~G~q~al-~-l~~~~l~~pGd~v~vE~PtY~~~~~---~~--~~~g~~~~~vp~d~~G~~~e~le~~~~ 223 (459)
T COG1167 151 ISCEPEQIVITSGAQQAL-D-LLLRLLLDPGDTVLVEDPTYPGALQ---AL--EALGARVIPVPVDEDGIDPEALEEALA 223 (459)
T ss_pred CccCcCeEEEeCCHHHHH-H-HHHHHhCCCCCEEEEcCCCcHHHHH---HH--HHcCCcEEecCCCCCCCCHHHHHHHHh
Confidence 333444566665532221 1 2222335589988888886663221 11 234777776543333347888999999
Q ss_pred ccceeeEEecccch
Q psy14342 91 QYRVRDTFCSYGML 104 (316)
Q Consensus 91 ~~~~t~~~~~~~~~ 104 (316)
++++..++++|+.-
T Consensus 224 ~~~~k~~y~~P~~q 237 (459)
T COG1167 224 QWKPKAVYVTPTFQ 237 (459)
T ss_pred hcCCcEEEECCCCC
Confidence 99999999988764
No 252
>PRK07868 acyl-CoA synthetase; Validated
Probab=22.15 E-value=5.7e+02 Score=26.86 Aligned_cols=77 Identities=12% Similarity=0.091 Sum_probs=55.2
Q ss_pred EEeHHHHHHHHHHHHHH---hcCCCCCceEEecCCcCChhhhHHHHhhhhcCceeeeeCCcccccChHHHHHHHhcccee
Q psy14342 19 KMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 95 (316)
Q Consensus 19 ~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~t 95 (316)
.+|.+.+...+..+... .++.++|++..+++- ...++..++..+..|+..+..+|. .....+++..++.
T Consensus 472 ~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n--~~e~v~a~lA~~~aGav~vpl~p~------~~l~~il~~s~~~ 543 (994)
T PRK07868 472 VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMET--RPSALVAIAALSRLGAVAVLMPPD------TDLAAAVRLGGVT 543 (994)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CHHHHHHHHHHHhcCCEEEEeCCc------hhHHHHHhccCCe
Confidence 58898887776655554 478899999888764 345666688999999999988764 2445677777777
Q ss_pred eEEecccc
Q psy14342 96 DTFCSYGM 103 (316)
Q Consensus 96 ~~~~~~~~ 103 (316)
++++....
T Consensus 544 ~li~~~~~ 551 (994)
T PRK07868 544 EIITDPTN 551 (994)
T ss_pred EEEEChHH
Confidence 66655433
No 253
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=21.64 E-value=4e+02 Score=21.92 Aligned_cols=66 Identities=18% Similarity=0.126 Sum_probs=41.7
Q ss_pred cChHhHHHHHHHhccccceeEEEee-CC-----------cEEEEEEecCCchhhcchHHHHHHHHHHhc-CeeecEEEEE
Q psy14342 214 YHPIDIENSVMRAHKKIAECAVFTW-TN-----------LLVVVVELDGNESEALDLVPLVTNAVLEEH-HLIVGVAVVV 280 (316)
Q Consensus 214 v~p~eIE~~l~~~~p~v~~~~v~~~-~~-----------~~~~~v~~~~~~~~~~~l~~~~~~~l~~~~-~~~~~~~~~~ 280 (316)
---.|+|+.|.. .++|..|.|.-. ++ ...+++.+.++.... +..+.|++.+.... ++.+..|.++
T Consensus 115 ale~eL~~tI~~-i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~l~-~qv~~I~~LVa~sV~gL~~enVtVv 192 (206)
T PF01514_consen 115 ALEGELERTIES-IDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSELS-EQVQGIQNLVASSVPGLKPENVTVV 192 (206)
T ss_dssp HHHHHHHHHHTT-STTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS--G-GGHHHHHHHHHHHSTT--GGGEEEE
T ss_pred HHHHHHHHHHHc-CCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCChH-HHHHHHHHHHHHhcCCCCcccEEEE
Confidence 355789999988 999988777644 21 466777777766555 66666777777543 3555666666
Q ss_pred c
Q psy14342 281 D 281 (316)
Q Consensus 281 ~ 281 (316)
+
T Consensus 193 D 193 (206)
T PF01514_consen 193 D 193 (206)
T ss_dssp E
T ss_pred e
Confidence 5
Done!