Query psy14345
Match_columns 431
No_of_seqs 369 out of 2176
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 17:31:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dva_I Dihydrolipoyllysine-res 100.0 2.7E-66 9.3E-71 534.8 1.3 317 10-344 52-421 (428)
2 3mae_A 2-oxoisovalerate dehydr 100.0 4.2E-61 1.4E-65 464.5 23.5 227 102-345 15-241 (256)
3 1scz_A E2, dihydrolipoamide su 100.0 3.9E-60 1.3E-64 452.8 23.4 222 105-343 4-225 (233)
4 3l60_A Branched-chain alpha-ke 100.0 1.6E-59 5.4E-64 452.0 22.8 222 101-345 11-236 (250)
5 1dpb_A Dihydrolipoyl-transacet 100.0 1.1E-58 3.7E-63 445.4 23.8 224 103-344 13-238 (243)
6 2ii3_A Lipoamide acyltransfera 100.0 7.1E-58 2.4E-62 443.8 24.1 223 103-344 29-254 (262)
7 3b8k_A PDCE2;, dihydrolipoylly 100.0 8.7E-58 3E-62 438.3 14.1 222 103-343 10-233 (239)
8 3rqc_A Probable lipoamide acyl 100.0 6.4E-57 2.2E-61 428.2 19.9 212 103-344 4-217 (224)
9 2xt6_A 2-oxoglutarate decarbox 100.0 5.1E-46 1.7E-50 420.0 14.4 211 120-344 1-222 (1113)
10 1q23_A Chloramphenicol acetylt 100.0 3.2E-40 1.1E-44 312.3 22.9 198 107-343 10-214 (219)
11 3cla_A Type III chloramphenico 100.0 7.6E-40 2.6E-44 308.6 21.5 181 126-342 23-209 (213)
12 2i9d_A Chloramphenicol acetylt 100.0 2.6E-38 8.9E-43 298.7 20.3 179 126-340 25-215 (217)
13 3mae_A 2-oxoisovalerate dehydr 99.9 1.4E-22 4.6E-27 195.5 12.6 105 325-431 50-154 (256)
14 1scz_A E2, dihydrolipoamide su 99.9 5E-22 1.7E-26 189.3 12.8 113 312-431 28-140 (233)
15 3l60_A Branched-chain alpha-ke 99.9 9.5E-22 3.2E-26 189.0 11.9 100 325-431 46-149 (250)
16 3rqc_A Probable lipoamide acyl 99.9 8.8E-22 3E-26 186.6 11.3 108 312-431 30-139 (224)
17 1dpb_A Dihydrolipoyl-transacet 99.9 2.7E-21 9.4E-26 185.3 12.8 104 325-431 47-152 (243)
18 2ii3_A Lipoamide acyltransfera 99.8 3.5E-21 1.2E-25 186.4 12.9 104 325-431 62-167 (262)
19 3b8k_A PDCE2;, dihydrolipoylly 99.8 5.7E-21 2E-25 182.7 9.7 103 325-431 44-146 (239)
20 3cla_A Type III chloramphenico 99.8 1.5E-18 5E-23 163.2 11.9 103 311-431 25-129 (213)
21 3dva_I Dihydrolipoyllysine-res 99.8 3.3E-20 1.1E-24 191.3 0.0 104 325-431 230-335 (428)
22 1q23_A Chloramphenicol acetylt 99.8 2.8E-18 9.5E-23 162.0 12.8 103 311-431 30-134 (219)
23 2xt6_A 2-oxoglutarate decarbox 99.7 9.2E-18 3.1E-22 190.0 11.0 114 311-431 8-130 (1113)
24 2i9d_A Chloramphenicol acetylt 99.7 2E-17 6.9E-22 155.8 10.8 103 311-431 27-132 (217)
25 1zy8_K Pyruvate dehydrogenase 97.3 4E-05 1.4E-09 72.3 0.5 85 11-95 54-156 (229)
26 1bal_A Dihydrolipoamide succin 92.6 0.085 2.9E-06 37.5 3.1 25 71-95 12-37 (51)
27 2eq7_C 2-oxoglutarate dehydrog 89.8 0.077 2.6E-06 35.5 0.5 24 72-95 3-27 (40)
28 3rnm_E Lipoamide acyltransfera 89.6 0.07 2.4E-06 39.1 0.2 25 70-94 9-34 (58)
29 2eq8_C Pyruvate dehydrogenase 89.5 0.075 2.6E-06 35.6 0.3 24 72-95 3-27 (40)
30 2eq9_C Pyruvate dehydrogenase 89.3 0.078 2.7E-06 35.7 0.2 24 72-95 4-28 (41)
31 1w85_I Dihydrolipoyllysine-res 86.3 0.17 5.7E-06 35.5 0.4 24 71-94 9-33 (49)
32 2k7v_A Dihydrolipoyllysine-res 85.8 0.76 2.6E-05 35.6 4.1 25 13-37 49-73 (85)
33 1dcz_A Transcarboxylase 1.3S s 84.4 0.91 3.1E-05 34.1 3.9 32 6-37 11-42 (77)
34 2dnc_A Pyruvate dehydrogenase 83.6 1.3 4.5E-05 35.5 4.7 25 13-37 23-47 (98)
35 2d5d_A Methylmalonyl-COA decar 83.6 1 3.4E-05 33.4 3.8 31 7-37 9-39 (74)
36 1qjo_A Dihydrolipoamide acetyl 83.3 0.96 3.3E-05 34.3 3.6 28 11-38 14-41 (80)
37 1qjo_A Dihydrolipoamide acetyl 82.9 1 3.5E-05 34.1 3.7 31 8-38 48-78 (80)
38 1z6h_A Biotin/lipoyl attachmen 82.7 1.1 3.8E-05 33.0 3.7 27 11-37 7-33 (72)
39 1k8m_A E2 component of branche 82.5 1.5 5.2E-05 34.6 4.7 29 10-38 17-45 (93)
40 2k32_A A; NMR {Campylobacter j 81.0 1.3 4.5E-05 36.1 3.9 30 8-37 6-35 (116)
41 2coo_A Lipoamide acyltransfera 80.7 0.6 2.1E-05 35.4 1.5 25 71-95 18-43 (70)
42 1iyu_A E2P, dihydrolipoamide a 80.7 0.98 3.3E-05 34.3 2.8 26 13-38 14-39 (79)
43 3crk_C Dihydrolipoyllysine-res 79.9 1.8 6.2E-05 33.6 4.2 29 11-39 19-47 (87)
44 1y8o_B Dihydrolipoyllysine-res 79.8 1.6 5.5E-05 36.9 4.1 18 18-35 48-65 (128)
45 3crk_C Dihydrolipoyllysine-res 79.0 1.4 4.8E-05 34.2 3.2 23 17-39 62-85 (87)
46 2dne_A Dihydrolipoyllysine-res 78.8 0.83 2.8E-05 37.4 1.9 24 13-36 23-46 (108)
47 1ghj_A E2, E2, the dihydrolipo 78.6 1.1 3.8E-05 33.9 2.5 28 11-38 15-42 (79)
48 2dnc_A Pyruvate dehydrogenase 78.5 1.4 4.8E-05 35.3 3.2 24 17-40 64-88 (98)
49 2f60_K Pyruvate dehydrogenase 78.3 0.38 1.3E-05 35.8 -0.3 25 71-95 12-37 (64)
50 1k8m_A E2 component of branche 77.7 1.8 6.1E-05 34.2 3.5 28 13-40 57-84 (93)
51 2dne_A Dihydrolipoyllysine-res 77.2 1.5 5.2E-05 35.8 3.0 23 17-39 64-87 (108)
52 1iyu_A E2P, dihydrolipoamide a 76.8 2.9 9.9E-05 31.5 4.4 30 9-38 47-76 (79)
53 1w4i_A Pyruvate dehydrogenase 76.6 0.43 1.5E-05 35.3 -0.4 24 72-95 8-32 (62)
54 1ghj_A E2, E2, the dihydrolipo 76.0 2.5 8.5E-05 31.9 3.8 28 10-37 51-78 (79)
55 2dn8_A Acetyl-COA carboxylase 75.6 2 6.8E-05 34.3 3.3 31 7-37 21-51 (100)
56 2l5t_A Lipoamide acyltransfera 75.1 1.6 5.5E-05 32.8 2.5 27 11-37 15-41 (77)
57 1gjx_A Pyruvate dehydrogenase; 74.6 1.8 6.2E-05 32.8 2.7 29 10-38 14-42 (81)
58 1bdo_A Acetyl-COA carboxylase; 74.3 2.6 8.9E-05 31.8 3.6 18 18-35 26-43 (80)
59 2l5t_A Lipoamide acyltransfera 73.2 3.3 0.00011 31.0 3.9 26 10-35 51-76 (77)
60 2ejm_A Methylcrotonoyl-COA car 72.5 2.8 9.7E-05 33.3 3.5 30 8-37 19-48 (99)
61 2kcc_A Acetyl-COA carboxylase 72.2 2.7 9.1E-05 32.4 3.2 32 7-38 9-40 (84)
62 2jku_A Propionyl-COA carboxyla 71.5 2.5 8.4E-05 33.4 2.9 28 10-37 32-59 (94)
63 1y8o_B Dihydrolipoyllysine-res 71.0 3.1 0.00011 35.2 3.5 25 16-40 83-108 (128)
64 1pmr_A Dihydrolipoyl succinylt 69.6 2.3 7.8E-05 32.3 2.2 26 10-35 15-40 (80)
65 1bdo_A Acetyl-COA carboxylase; 68.5 3.6 0.00012 31.0 3.1 18 18-35 63-80 (80)
66 1pmr_A Dihydrolipoyl succinylt 67.5 1.3 4.3E-05 33.8 0.3 23 14-36 56-78 (80)
67 1z6h_A Biotin/lipoyl attachmen 66.4 5.2 0.00018 29.2 3.6 28 9-36 42-69 (72)
68 2f1m_A Acriflavine resistance 64.0 3.8 0.00013 38.3 3.0 32 6-37 25-56 (277)
69 2k7v_A Dihydrolipoyllysine-res 61.7 1.3 4.4E-05 34.2 -0.7 26 13-38 12-37 (85)
70 2gpr_A Glucose-permease IIA co 61.5 6.1 0.00021 34.4 3.6 20 17-36 93-112 (154)
71 3fpp_A Macrolide-specific effl 60.2 5.9 0.0002 38.1 3.7 30 8-37 36-65 (341)
72 2ejm_A Methylcrotonoyl-COA car 59.9 11 0.00037 29.8 4.6 31 10-40 58-88 (99)
73 1dcz_A Transcarboxylase 1.3S s 59.5 6.5 0.00022 29.1 3.1 27 9-35 51-77 (77)
74 2d5d_A Methylmalonyl-COA decar 59.3 8.2 0.00028 28.2 3.6 27 9-35 48-74 (74)
75 3our_B EIIA, phosphotransferas 57.4 6.1 0.00021 35.4 2.9 21 16-36 119-139 (183)
76 1gjx_A Pyruvate dehydrogenase; 57.3 5.3 0.00018 30.1 2.2 28 10-37 51-78 (81)
77 3lnn_A Membrane fusion protein 57.0 7.1 0.00024 37.9 3.6 30 7-36 61-90 (359)
78 1vf7_A Multidrug resistance pr 51.3 7.9 0.00027 38.0 2.9 30 7-36 47-76 (369)
79 1f3z_A EIIA-GLC, glucose-speci 47.6 11 0.00038 33.1 2.9 19 18-36 99-117 (161)
80 3ne5_B Cation efflux system pr 47.4 13 0.00044 37.2 3.8 29 7-35 125-154 (413)
81 4dk0_A Putative MACA; alpha-ha 47.0 6.8 0.00023 38.1 1.6 31 7-37 36-66 (369)
82 2dn8_A Acetyl-COA carboxylase 46.1 18 0.00063 28.4 3.8 26 11-37 62-87 (100)
83 2kcc_A Acetyl-COA carboxylase 44.2 15 0.0005 28.1 2.9 26 11-37 50-75 (84)
84 1ax3_A Iiaglc, glucose permeas 44.0 10 0.00035 33.3 2.2 19 18-36 99-117 (162)
85 1zy8_K Pyruvate dehydrogenase 40.2 6 0.0002 36.7 0.0 26 14-39 20-45 (229)
86 2jku_A Propionyl-COA carboxyla 38.6 6.5 0.00022 30.9 0.0 25 11-35 70-94 (94)
87 3n6r_A Propionyl-COA carboxyla 37.6 18 0.00061 38.9 3.2 25 14-38 623-647 (681)
88 2k32_A A; NMR {Campylobacter j 29.6 37 0.0013 27.1 3.2 29 10-38 74-103 (116)
89 3fot_A 15-O-acetyltransferase; 27.9 1.1E+02 0.0037 31.6 7.1 42 133-178 280-321 (519)
90 1zko_A Glycine cleavage system 27.3 44 0.0015 28.2 3.4 21 19-39 53-73 (136)
91 1hpc_A H protein of the glycin 27.2 52 0.0018 27.6 3.8 21 19-39 44-64 (131)
92 3hbl_A Pyruvate carboxylase; T 26.4 34 0.0012 39.0 3.2 26 13-38 1087-1112(1150)
93 1onl_A Glycine cleavage system 25.0 41 0.0014 28.1 2.7 21 19-39 44-64 (128)
94 3va7_A KLLA0E08119P; carboxyla 24.7 38 0.0013 39.0 3.2 26 14-39 1178-1203(1236)
95 3a7l_A H-protein, glycine clea 24.5 44 0.0015 27.9 2.8 21 19-39 45-65 (128)
96 3bg3_A Pyruvate carboxylase, m 23.7 32 0.0011 37.2 2.2 27 12-38 658-684 (718)
97 1iv0_A Hypothetical protein; r 21.6 1.4E+02 0.0047 23.5 5.1 41 382-425 7-50 (98)
98 3twe_A Alpha4H; unknown functi 21.5 89 0.003 18.3 2.8 18 411-428 10-27 (27)
99 3u9t_A MCC alpha, methylcroton 20.9 21 0.0007 38.3 0.0 25 14-38 613-637 (675)
No 1
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00 E-value=2.7e-66 Score=534.83 Aligned_cols=317 Identities=24% Similarity=0.362 Sum_probs=24.1
Q ss_pred ccceeeeeecCCCCeEecCceeEEEecCCCCCCCCC-----CC---CCCCCCCCCC----CCCC----CC--CCCCCCCC
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIKPTATSVVDWW-----SS---PEEGSSAQSR----GYSS----SS--SSSLCCCS 71 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie~~~~~~a~~~-----~~---~~~~~~~~~~----~~~~----~~--~~~~~~~~ 71 (431)
.+-.+..+.+++||+|++|++|+.|+.++++.+... ++ +.+.+.+... ..+. .. ....+..+
T Consensus 52 ~~G~v~~i~v~~G~~V~~G~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 131 (428)
T 3dva_I 52 VKGKVLEILVPEGTVATVGQTLITLDAPGYENMTFKGQEQEEAKKEEKTETVSKEEKVDAVAPNAPAAEAEAGPNRRVIA 131 (428)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred CCeEEEEEEeCCCCEeCCCCEEEEEecCCccccccccccccccccCCCcccCCccccccCCCcccccccccccccccccc
Confidence 344566789999999999999999996554321100 00 0000000000 0000 00 00112345
Q ss_pred CCCC-chhhhcCCCccccCCCC-------CCCCccccC-------------------------CCCceEEeccHHHHHHH
Q psy14345 72 SPSP-SLCYSSAIEAATVKLPP-------ADPTKEISG-------------------------TRSEQRVKMNRMRQRIA 118 (431)
Q Consensus 72 sp~~-~lA~e~gIdl~~v~gtg-------~dv~~~~a~-------------------------~~~~~~vpls~~Rk~ia 118 (431)
+|.+ +||+|+||||+.|+||| +|+...... ...++++||++|||.||
T Consensus 132 sP~~R~lA~e~gvdl~~v~gtG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~Rk~ia 211 (428)
T 3dva_I 132 MPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGGAKPAPAAAEEKAAPAAAKPATTEGEFPETREKMSGIRRAIA 211 (428)
T ss_dssp CHHHHHHHHHTTCCGGGSCCCSTTSCCCTTTTTTTSCC------------------------------------------
T ss_pred CHHHHHHHHHcCCCHHHCCCCCCCCceeHHHHHHHhhccccccccccccccccCCCCccccccCCccccccCcHHHHHHH
Confidence 6666 99999999999999999 565442110 01256899999999999
Q ss_pred HHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccceeeeC--CeeEecCcc
Q psy14345 119 QRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEG--TDIVYRDYV 196 (431)
Q Consensus 119 ~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N~~~~~--~~i~~~~~v 196 (431)
++|++||+++||||++.+||+|+|+++|+++|+.+. +.|.|+||++||+||+++||++||+||++|++ ++|++++++
T Consensus 212 ~~m~~S~~~~P~~~~~~evDvt~l~~~rk~~~~~~~-~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v 290 (428)
T 3dva_I 212 KAMVHSKHTAPHVTLMDEADVTKLVAHRKKFKAIAA-EKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYY 290 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcccCCeEEEEEEEeHHHHHHHHHHhhhhHh-hcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCcc
Confidence 999999999999999999999999999999987543 45899999999999999999999999999987 899999999
Q ss_pred cEEEEEeecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCCCCcccCCCceEEEecCCCCC
Q psy14345 197 DISVGMGRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWNLAIEDSDGGTFTISNGGVFG 276 (431)
Q Consensus 197 ~igvav~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~L~~~~~~ggTftiSn~G~~G 276 (431)
|||+||++ + +||++|||+|+++++ | .+|++++++++++|| +|+|+++|++||||||||+||||
T Consensus 291 ~igiAV~t-----~----~GL~vPvi~~a~~~s--l-----~eia~~~~~l~~~ar-~gkL~~~e~~ggtftISnlG~~G 353 (428)
T 3dva_I 291 NIGIAADT-----D----RGLLVPVIKHADRKP--I-----FALAQEINELAEKAR-DGKLTPGEMKGASCTITNIGSAG 353 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEEEEEc-----C----CceEEeeeccCCCCC--H-----HHHHHHHHHHHHHHH-cCCCCccccCCCEEEEEcCCCCC
Confidence 99999999 8 999999999999999 9 999999999999999 99999999999999999999999
Q ss_pred ccceeeccCCCcceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhHhhhh
Q psy14345 277 SLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHLEAFQ 344 (431)
Q Consensus 277 ~~~~~pii~ppq~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~~ 344 (431)
++.|+|||||||+||||+|++.++||+.+|+++++++|+++++||||+|||..+++|++.++++.+.+
T Consensus 354 ~~~ftpIin~pq~aIl~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDG~~aa~Fl~~lk~~Le~P 421 (428)
T 3dva_I 354 GQWFTPVINHPEVAILGIGRIAEKPIVRDGEIVAAPMLALSLSFDHRMIDGATAQKALNHIKRLLSDP 421 (428)
T ss_dssp --------------------------------------------------------------------
T ss_pred ccceEeecCCCCceEEEccccEEEEEEECCEEEEeeeEEEEEEecccccchHHHHHHHHHHHHHHhCH
Confidence 99999999999999999999999999999999999999999999999999999999999999876653
No 2
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00 E-value=4.2e-61 Score=464.50 Aligned_cols=227 Identities=29% Similarity=0.446 Sum_probs=219.4
Q ss_pred CCCceEEeccHHHHHHHHHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCcc
Q psy14345 102 TRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVV 181 (431)
Q Consensus 102 ~~~~~~vpls~~Rk~ia~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~ 181 (431)
.+.++++|++++||+||++|++|++++||||++.+||+|+|+++|+++|+.+.++.|.|+||++|++||++.||++||+|
T Consensus 15 ~~~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~ 94 (256)
T 3mae_A 15 AAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQL 94 (256)
T ss_dssp CCSCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCTTT
T ss_pred CCCceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCHHh
Confidence 45678999999999999999999999999999999999999999999998877777899999999999999999999999
Q ss_pred ceeeeCCeeEecCcccEEEEEeecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCCCCccc
Q psy14345 182 NAVIEGTDIVYRDYVDISVGMGRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWNLAIED 261 (431)
Q Consensus 182 N~~~~~~~i~~~~~v~igvav~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~L~~~~ 261 (431)
|++|++++|++++++|||+||++ + +||++|||+|+|+++ + .+|++++++++++|| +|+|+++|
T Consensus 95 Na~~~~~~i~~~~~vnigiAV~t-----~----~GL~vPvi~~ad~~s--l-----~ei~~~i~~l~~~Ar-~gkL~~~e 157 (256)
T 3mae_A 95 NSTWAGDKIIEHANINISIAIAA-----G----DLLYVPVIKNADEKS--I-----KGIAREISELAGKAR-NGKLSQAD 157 (256)
T ss_dssp SEEEETTEEEECSSCCEEECCCC-----T----TSCCCCEETTGGGSC--H-----HHHHHHHHHHHHHHH-TTCCCHHH
T ss_pred hhEEecCEEEEcCcEEEEeEEEc-----C----CceEEEEEcCCCCCC--H-----HHHHHHHHHHHHHHh-cCCCCchh
Confidence 99999999999999999999999 8 999999999999999 9 999999999999999 99999999
Q ss_pred CCCceEEEecCCCCCccceeeccCCCcceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhHh
Q psy14345 262 SDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHLE 341 (431)
Q Consensus 262 ~~ggTftiSn~G~~G~~~~~pii~ppq~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~ 341 (431)
++||||||||+||||++.|+|||||||+||||+|+++++||+.+|+++++++|+++++||||+|||..+++|++.++++.
T Consensus 158 ~~ggTftISNlG~~G~~~ftpIInppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~L 237 (256)
T 3mae_A 158 MEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANV 237 (256)
T ss_dssp HSCCSEEEECGGGGTCSEEECCCCTTSSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCCCccceEcccCCCCceEEEecccEEEEEEECCEEEEeEEEEEEEEEccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhh
Q psy14345 342 AFQK 345 (431)
Q Consensus 342 ~~~~ 345 (431)
+.+.
T Consensus 238 e~P~ 241 (256)
T 3mae_A 238 EKIS 241 (256)
T ss_dssp HTCC
T ss_pred hChH
Confidence 6543
No 3
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00 E-value=3.9e-60 Score=452.81 Aligned_cols=222 Identities=53% Similarity=0.845 Sum_probs=215.3
Q ss_pred ceEEeccHHHHHHHHHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCcccee
Q psy14345 105 EQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAV 184 (431)
Q Consensus 105 ~~~vpls~~Rk~ia~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N~~ 184 (431)
++++|++++||+||++|++|++++||||++.+||+|+|+++|+++|+.+.++.|.|+||++|++||++.||++||+||++
T Consensus 4 ~~~~~~~~~r~~ia~~m~~S~~~~P~~~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~ 83 (233)
T 1scz_A 4 EKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 83 (233)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCE
T ss_pred ceeccCCHHHHHHHHHHHHhccCCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhhEE
Confidence 56789999999999999999999999999999999999999999998777677899999999999999999999999999
Q ss_pred eeCCeeEecCcccEEEEEeecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCCCCcccCCC
Q psy14345 185 IEGTDIVYRDYVDISVGMGRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWNLAIEDSDG 264 (431)
Q Consensus 185 ~~~~~i~~~~~v~igvav~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~L~~~~~~g 264 (431)
|+++++++++++|||+||++ + +||++|||+++++++ + .+|++++++++++|| +|+|+++|++|
T Consensus 84 ~~~~~i~~~~~v~igiAV~~-----~----~GL~vPvi~~a~~~~--l-----~~i~~~~~~l~~~ar-~~kL~~~e~~g 146 (233)
T 1scz_A 84 IDGDDVVYHNYFDVSMAVST-----P----RGLVTPVLRDVDTLG--M-----ADIEKKIKELAVKGR-DGKLTVEDLTG 146 (233)
T ss_dssp EETTEEECCSSCCEEECEEE-----T----TEEECCEETTGGGCC--H-----HHHHHHHHHHHHHTT-TTCCCHHHHSC
T ss_pred EeCCEEEEeCceeEEEEEEc-----C----CcEEEEEEcCCCCCC--H-----HHHHHHHHHHHHHHH-cCCCCccccCC
Confidence 99999999999999999999 8 999999999999999 9 999999999999999 99999999999
Q ss_pred ceEEEecCCCCCccceeeccCCCcceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhHhhh
Q psy14345 265 GTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHLEAF 343 (431)
Q Consensus 265 gTftiSn~G~~G~~~~~pii~ppq~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~ 343 (431)
|||||||+||||++.|+|||||||+||||+|+++++|++.+|+++++++|+++++||||+|||..+++|++.++++.+.
T Consensus 147 gtftISnlG~~G~~~~tpIin~pq~aIl~vG~~~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 147 GNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp CSEEEEEGGGGTCCCCCCCCCTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred CEEEEEeCCCCCccceEcccCCCCcEEEEccccEEEEEEECCEEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986654
No 4
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=100.00 E-value=1.6e-59 Score=452.02 Aligned_cols=222 Identities=23% Similarity=0.358 Sum_probs=209.7
Q ss_pred CCCCceEEeccHHHHHHHHHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCc
Q psy14345 101 GTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPV 180 (431)
Q Consensus 101 ~~~~~~~vpls~~Rk~ia~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~ 180 (431)
+.+..++ |++++||+||++|++|++++||||++.+||+|+|+++|+++|+ .|.|+||++|++||+++||++||+
T Consensus 11 ~~~~~~r-pls~~rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~r~~~k~-----~~~kls~~~~iikAva~AL~~~P~ 84 (250)
T 3l60_A 11 GAGPDVR-PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVS-----AAPEITPFALTLRLLVIALKHNVI 84 (250)
T ss_dssp ---CCCC-CCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTT-----TCTTCCHHHHHHHHHHHHHHHCGG
T ss_pred CCCCCCC-CCcHHHHHHHHHHHHHhhcCCeEEEEEEEEHHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHhCHH
Confidence 3445556 9999999999999999999999999999999999999999753 378999999999999999999999
Q ss_pred cceeeeC----CeeEecCcccEEEEEeecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCC
Q psy14345 181 VNAVIEG----TDIVYRDYVDISVGMGRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWN 256 (431)
Q Consensus 181 ~N~~~~~----~~i~~~~~v~igvav~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~ 256 (431)
||++|++ ++|++++++|||+||++ + +||++|||+|+++++ + .+|++++++++++|| +|+
T Consensus 85 ~Na~~~~~~~~~~i~~~~~vnigvAV~t-----~----~GL~vPvi~~ad~~s--l-----~ei~~~i~~l~~~Ar-~gk 147 (250)
T 3l60_A 85 LNSTWVDSGEGPQVHVHRGVHLGFGAAT-----E----RGLLVPVVTDAQDKN--T-----RELASRVAELITGAR-EGT 147 (250)
T ss_dssp GSEEEECTTTSCEEEECSSCCEEECEEE-----T----TEEECCEETTGGGCC--H-----HHHHHHHHHHHHHHH-HTC
T ss_pred hhEEEeccCCCCeEEEcCceeEEEEEEc-----C----CCeEEeEEecCCCCC--H-----HHHHHHHHHHHHHHH-cCC
Confidence 9999975 49999999999999999 8 999999999999999 9 999999999999999 999
Q ss_pred CCcccCCCceEEEecCCCCCccceeeccCCCcceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHH
Q psy14345 257 LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQK 336 (431)
Q Consensus 257 L~~~~~~ggTftiSn~G~~G~~~~~pii~ppq~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~ 336 (431)
|+++|++||||||||+||||++.|+|||||||+||||+|+++++||+.+|+++++++|+++++||||+|||..+++|++.
T Consensus 148 L~~~e~~ggTftISNlG~~G~~~ftpIinppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~ 227 (250)
T 3l60_A 148 LTPAELRGSTFTVSNFGALGVDDGVPVINHPEAAILGLGAIKPRPVVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCE 227 (250)
T ss_dssp CCGGGGSCCSEEEECGGGGTCSSCCCCCCTTCSEEEEECCCEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred CChhhcCCCEEEEEcCCCCCcceeEeeeCCCCceEEEecceEEEeEEECCEEEEEEEeEEEEEecccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhhhhh
Q psy14345 337 EAHLEAFQK 345 (431)
Q Consensus 337 lk~l~~~~~ 345 (431)
++++.+.+.
T Consensus 228 lk~~Le~P~ 236 (250)
T 3l60_A 228 LRDLIESPE 236 (250)
T ss_dssp HHHHHHSHH
T ss_pred HHHHHhCHH
Confidence 998766543
No 5
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00 E-value=1.1e-58 Score=445.38 Aligned_cols=224 Identities=28% Similarity=0.384 Sum_probs=213.6
Q ss_pred CCceEEeccHHHHHHHHHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccc
Q psy14345 103 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVN 182 (431)
Q Consensus 103 ~~~~~vpls~~Rk~ia~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N 182 (431)
+..+++|++++||.||++|++||+++||||++.+||+|+|+++|+++|+.+.+ .|.|+||++|++||+++||++||+||
T Consensus 13 ~~~~~~~~~~~rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~-~g~kls~~~~~ikA~~~Al~~~P~~N 91 (243)
T 1dpb_A 13 GEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAEK-AGVKLTVLPLLLKACAYLLKELPDFN 91 (243)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHTHHHHHH-TTCCCCSHHHHHHHHHHHHHHSGGGG
T ss_pred CCceEeeCcHHHHHHHHHHHHhCcCCCeEEEEEEEEhHHHHHHHHHHhhhhhh-ccCCCChHHHHHHHHHHHHHhChHhh
Confidence 34577899999999999999999999999999999999999999999876543 48999999999999999999999999
Q ss_pred eeeeC--CeeEecCcccEEEEEeecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCCCCcc
Q psy14345 183 AVIEG--TDIVYRDYVDISVGMGRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWNLAIE 260 (431)
Q Consensus 183 ~~~~~--~~i~~~~~v~igvav~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~L~~~ 260 (431)
++|++ ++|++++++|||+||++ + +||++|||+|+|+++ + .+|++++++++++|| +|+|+++
T Consensus 92 a~~~~~~~~i~~~~~v~igiAV~t-----~----~GL~vPvi~~a~~~s--l-----~ei~~~~~~l~~~ar-~~kL~~~ 154 (243)
T 1dpb_A 92 SSLAPSGQALIRKKYVHIGFAVDT-----P----DGLLVPVIRNVDQKS--L-----LQLAAEAAELAEKAR-SKKLGAD 154 (243)
T ss_dssp EEECTTSSCEEECSSCCEEECEEE-----T----TEEECCEETTGGGSC--H-----HHHHHHHHHHHHHHH-TTCCCGG
T ss_pred EEEecCCCeEEEeCceeEEEEEEC-----C----CcEEEEEeCCCCCCC--H-----HHHHHHHHHHHHHHH-cCCCCcc
Confidence 99985 49999999999999999 8 999999999999999 9 999999999999999 9999999
Q ss_pred cCCCceEEEecCCCCCccceeeccCCCcceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhH
Q psy14345 261 DSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHL 340 (431)
Q Consensus 261 ~~~ggTftiSn~G~~G~~~~~pii~ppq~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l 340 (431)
|++||||||||+||||++.|+|||||||+||||+|+++++||+.+|+++++++|+++++||||+|||..+++|++.++++
T Consensus 155 e~~ggtftISnlG~~g~~~~tpIin~pq~aIl~vG~~~~~pv~~~g~i~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~ 234 (243)
T 1dpb_A 155 AMQGACFTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDCRVINGAAAARFTKRLGDL 234 (243)
T ss_dssp GGSCCSEEEEECTTTCCSCCCCCCCTTSSEEEEECCCEEEEEECSSSEEEEEEEEEEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCccceECccCCCCCeEEEccccEEEEEEECCeEEEEEEEEEEEEECcccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhh
Q psy14345 341 EAFQ 344 (431)
Q Consensus 341 ~~~~ 344 (431)
.+.+
T Consensus 235 le~p 238 (243)
T 1dpb_A 235 LADI 238 (243)
T ss_dssp HHCG
T ss_pred HhCH
Confidence 6643
No 6
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=7.1e-58 Score=443.79 Aligned_cols=223 Identities=23% Similarity=0.335 Sum_probs=211.7
Q ss_pred CCceEEeccHHHHHHHHHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccc
Q psy14345 103 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVN 182 (431)
Q Consensus 103 ~~~~~vpls~~Rk~ia~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N 182 (431)
+.++++|+++|||+||++|++|+ ++||||++.+||+|+|+++|+++|+.. ++.|.|+||++|++||++.||++||+||
T Consensus 29 ~~~~~~p~~~~rk~ia~~m~~S~-~~P~~~~~~evDvt~l~~~r~~~k~~~-~~~g~kls~~~~~ikAva~Al~~~P~~N 106 (262)
T 2ii3_A 29 GKDRTEPVKGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKLREELKPIA-FARGIKLSFMPFFLKAASLGLLQFPILN 106 (262)
T ss_dssp CCCEEEECCGGGHHHHHHHHHGG-GSCEEEEEEEEECHHHHHHHHHHHHHH-HHTTCCCCSHHHHHHHHHHHHHHCGGGS
T ss_pred CCcceecCCHHHHHHHHHHHHhh-hCCeEEEEEEEEhHHHHHHHHHHhhhh-hhccCCccHHHHHHHHHHHHHHhChHhh
Confidence 45778999999999999999997 699999999999999999999998743 3458999999999999999999999999
Q ss_pred eeeeC--CeeEecCcccEEEEEeecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCCCCcc
Q psy14345 183 AVIEG--TDIVYRDYVDISVGMGRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWNLAIE 260 (431)
Q Consensus 183 ~~~~~--~~i~~~~~v~igvav~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~L~~~ 260 (431)
++|++ ++|++++++|||+||++ + +||++|||+|+++++ | .+|++++++++++|| +|+|+++
T Consensus 107 a~~~~~~~~i~~~~~v~igiAV~t-----~----~GL~vPvi~~a~~~s--l-----~ei~~~~~~l~~~ar-~~kL~~~ 169 (262)
T 2ii3_A 107 ASVDENCQNITYKASHNIGIAMDT-----E----QGLIVPNVKNVQIRS--I-----FEIATELNRLQKLGS-AGQLSTN 169 (262)
T ss_dssp EEECTTSCEEEECSSCCEEECEEE-----T----TEEECCEETTGGGCC--H-----HHHHHHHHHHHHHHH-HTCCCHH
T ss_pred EEEeCCCCEEEEecccceEEEEEc-----C----CCEEEEEecCCCCCC--H-----HHHHHHHHHHHHHHH-hCCCCcc
Confidence 99985 48999999999999999 8 999999999999999 9 999999999999999 9999999
Q ss_pred cCCCceEEEecCCCCCccceeeccCCCcceeeeccceeEEEeee-CCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHh
Q psy14345 261 DSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAI-KGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAH 339 (431)
Q Consensus 261 ~~~ggTftiSn~G~~G~~~~~pii~ppq~ail~vG~i~~~pv~~-~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~ 339 (431)
|++||||||||+||||++.|+|||||||+||||+|+++++|++. +|+++++++|+++++||||+|||..+++|++.+++
T Consensus 170 e~~ggTftISNlG~~G~~~~tPIinppq~aIL~vG~~~~~pv~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~ 249 (262)
T 2ii3_A 170 DLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKS 249 (262)
T ss_dssp HHSCCCEEEECGGGTCCSCEECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEeCCCCCccceECccCCCcceEEEcCccEEEEEEecCCcEEEEeeeEEEEEECcceecHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 78999999999999999999999999999999998
Q ss_pred Hhhhh
Q psy14345 340 LEAFQ 344 (431)
Q Consensus 340 l~~~~ 344 (431)
+.+.+
T Consensus 250 ~Le~P 254 (262)
T 2ii3_A 250 YLENP 254 (262)
T ss_dssp HHHST
T ss_pred HHhCH
Confidence 76643
No 7
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-58 Score=438.32 Aligned_cols=222 Identities=27% Similarity=0.338 Sum_probs=211.5
Q ss_pred CCceEEeccHHHHHHHHHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccc
Q psy14345 103 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVN 182 (431)
Q Consensus 103 ~~~~~vpls~~Rk~ia~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N 182 (431)
+.++++|++++||+||++|++||+++||||++.+||+|+|+++|+++|+.+.+ +.|+||++|++||++.||++||+||
T Consensus 10 ~~~~~~~~~~~rk~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~--~~kls~~~~~ikAv~~Al~~~P~~N 87 (239)
T 3b8k_A 10 GVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEG--RSKISVNDFIIKASALACLKVPEAN 87 (239)
T ss_dssp CSCCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHHHHHTHHHHTT--SSCCCHHHHHHHHHHHHHHHCCCSC
T ss_pred CCceeccCChHHHHHHHHHHHhccCCCeEEEEEEEEcHHHHHHHHHHHhhhhc--cCCCCHHHHHHHHHHHHHHhChHhh
Confidence 45678899999999999999999999999999999999999999999875433 2599999999999999999999999
Q ss_pred eeeeCCeeEecCcccEEEEEeecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCCCCcccC
Q psy14345 183 AVIEGTDIVYRDYVDISVGMGRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWNLAIEDS 262 (431)
Q Consensus 183 ~~~~~~~i~~~~~v~igvav~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~L~~~~~ 262 (431)
++|+++++++++++|||+||++ + +||++|||+++|+++ + .+|++++++++++|| +|+|+++|+
T Consensus 88 a~~~~~~i~~~~~v~igvAV~~-----~----~GL~vPvi~~a~~~~--l-----~~i~~~~~~l~~~ar-~~kL~~~e~ 150 (239)
T 3b8k_A 88 SSWMDTVIRQNHVVDVSVAVST-----P----AGLITPIVFNAHIKG--V-----ETIANDVVSLATKAR-EGKLQPHEF 150 (239)
T ss_dssp TTSCCCSSSCSCCCCEEECEEC-----S----SCEECCEECCSSCCC--H-----HHHHHHHHHHHHHHH-TTCCCGGGG
T ss_pred EEEECCEEEEeCceeEEEEEEc-----C----CcEEEEEEcCCCCCC--H-----HHHHHHHHHHHHHHH-cCCCCcccc
Confidence 9999999999999999999999 8 999999999999999 9 999999999999999 999999999
Q ss_pred CCceEEEecCCCCCccceeeccCCCcceeeeccceeEEEee--eCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhH
Q psy14345 263 DGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVA--IKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHL 340 (431)
Q Consensus 263 ~ggTftiSn~G~~G~~~~~pii~ppq~ail~vG~i~~~pv~--~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l 340 (431)
+||||||||+||||++.|+|||||||+||||+|+++++|++ .+|+++++++|+++++||||+|||..+++|++.++++
T Consensus 151 ~ggtftISnlG~~g~~~ftpiin~pq~aIl~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~ 230 (239)
T 3b8k_A 151 QGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKY 230 (239)
T ss_dssp CCCSEEEEECCSSCCSSCCCCCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCceeEECcCCCCceEEEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceeechHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 4789999999999999999999999999999999986
Q ss_pred hhh
Q psy14345 341 EAF 343 (431)
Q Consensus 341 ~~~ 343 (431)
.+.
T Consensus 231 le~ 233 (239)
T 3b8k_A 231 LEK 233 (239)
T ss_dssp HHC
T ss_pred HhC
Confidence 654
No 8
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=6.4e-57 Score=428.16 Aligned_cols=212 Identities=26% Similarity=0.434 Sum_probs=202.0
Q ss_pred CCceEEeccHHHHHHHHHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccc
Q psy14345 103 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVN 182 (431)
Q Consensus 103 ~~~~~vpls~~Rk~ia~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N 182 (431)
+.++++|++++||+||++|++|++++||||++.+||+|+|+++|+++|+. |.|+||++|++||++.||++||+||
T Consensus 4 ~~~~~~p~~~~r~~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~-----g~kls~~~~~ikA~~~Al~~~P~~N 78 (224)
T 3rqc_A 4 GREEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKAR-----NRKVTVTGFLARIVPSILKQYPYLN 78 (224)
T ss_dssp --CBCCCCCHHHHHHHHHHHHHHHHSCEEEEEECCBTHHHHHHHHHHTTT-----TCCCCHHHHHHHHHHHHHHHSGGGS
T ss_pred CCceEeeCcHHHHHHHHHHHHHhcCCCeEEEEEEEEHHHHHHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHhCHHhh
Confidence 35678999999999999999999999999999999999999999997642 7899999999999999999999999
Q ss_pred eeeeCC--eeEecCcccEEEEEeecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCCCCcc
Q psy14345 183 AVIEGT--DIVYRDYVDISVGMGRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWNLAIE 260 (431)
Q Consensus 183 ~~~~~~--~i~~~~~v~igvav~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~L~~~ 260 (431)
++|+++ ++++++++|||+||++ + +||++|||+|+++++ + .+|++++++++++|| +|+|+++
T Consensus 79 ~~~~~~~~~i~~~~~v~igiAV~~-----~----~GL~vPvi~~a~~~s--l-----~~i~~~~~~l~~~ar-~~~L~~~ 141 (224)
T 3rqc_A 79 AIYDETRRVYILKKYYNIGIAVDT-----P----DGLNVFVIKDADRKS--M-----VEISAEISDKASRAR-ENKLQLD 141 (224)
T ss_dssp BBCCSSTTCCCEECSCCEEEEEEC-----S----SCEEEEEESCGGGSC--H-----HHHHHHHHHHHHHHT-TTCCCGG
T ss_pred eEEeCCCCEEEEeCccceEeEEEc-----C----CceEEeEECCCCCCC--H-----HHHHHHHHHHHHHHH-cCCCCcc
Confidence 999876 9999999999999999 8 999999999999999 9 999999999999999 9999999
Q ss_pred cCCCceEEEecCCCCCccceeeccCCCcceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhH
Q psy14345 261 DSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHL 340 (431)
Q Consensus 261 ~~~ggTftiSn~G~~G~~~~~pii~ppq~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l 340 (431)
|++||||||||+||||++.|+|||||||+||||+|++.++|+ +++|+++++||||+|||..+++|++.++++
T Consensus 142 e~~ggtftISnlG~~G~~~~tpiin~pq~aIl~vG~~~~~p~--------r~~m~lsls~DHRviDGa~aa~Fl~~l~~~ 213 (224)
T 3rqc_A 142 EVQDSTFTITNVGTIGGIMSTPIINYPEVAILGVHRILEREG--------RKYMYLSLSCDHRLIDGAVATRFIVDLKKV 213 (224)
T ss_dssp GSCCCSEEEEECTTTCCSEEECCCCTTBSEEEEECCCEEETT--------EEECCEEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCcCCccceEeccCCCCceEEEecccEEECC--------ceEEEEEEEeccceecHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999996 899999999999999999999999999987
Q ss_pred hhhh
Q psy14345 341 EAFQ 344 (431)
Q Consensus 341 ~~~~ 344 (431)
.+.+
T Consensus 214 le~p 217 (224)
T 3rqc_A 214 IEDP 217 (224)
T ss_dssp HTCT
T ss_pred HhCH
Confidence 6654
No 9
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=5.1e-46 Score=419.99 Aligned_cols=211 Identities=18% Similarity=0.211 Sum_probs=174.4
Q ss_pred HHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccceeeeCC----eeEecCc
Q psy14345 120 RLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGT----DIVYRDY 195 (431)
Q Consensus 120 ~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N~~~~~~----~i~~~~~ 195 (431)
+|++|+ ++||+|++.+||+|+|+++|+++|+.+.++.|.|+||++||+||++.||++||+||++|+++ .|+++++
T Consensus 1 ~m~~S~-~~P~~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~ 79 (1113)
T 2xt6_A 1 GMNASL-EVPTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAH 79 (1113)
T ss_dssp -------CCCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGGGCEEEESSSSEEEECCSS
T ss_pred Chhhhc-cCCeEEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHhhEEEeccCCCceEEEeCc
Confidence 689996 89999999999999999999999987777778999999999999999999999999999853 7999999
Q ss_pred ccEEEEEeecCCCCC-CccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcCCCCcccCCCceEEEecCCC
Q psy14345 196 VDISVGMGRNESNLP-RWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNWNLAIEDSDGGTFTISNGGV 274 (431)
Q Consensus 196 v~igvav~~~~~~~~-~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g~L~~~~~~ggTftiSn~G~ 274 (431)
|||||||++ + +.|.+||+||||+|+++++ | .+|++++++++++|| +|+|+++|++||||||||+||
T Consensus 80 vnigiAV~t-----~~~~G~~gL~vPvI~~a~~~s--l-----~ei~~~i~~l~~rAr-~gkL~~~d~~ggTftISNlG~ 146 (1113)
T 2xt6_A 80 TNLGLAIDL-----QGKDGNRSLVVAAIKRCETMR--F-----GQFIAAYEDIVRRAR-DGKLTAEDFSGVTISLTNPGT 146 (1113)
T ss_dssp CCEEEEC----------------CEEEECCGGGCC--H-----HHHHHHHHHHHHHHT-TTCCCGGGTSCCSEEEECC--
T ss_pred ccEEEEEec-----cCCCCceeEEeeeecCCCCCC--H-----HHHHHHHHHHHHHHh-cCCCCccccCCCEEEEeCCCc
Confidence 999999999 5 1233569999999999999 9 999999999999999 999999999999999999999
Q ss_pred CCccceeeccCCCcceeeeccceeEEEeeeC------CeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhHhhhh
Q psy14345 275 FGSLLGTPIINPPQSAILGMHGTFERPVAIK------GQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHLEAFQ 344 (431)
Q Consensus 275 ~G~~~~~pii~ppq~ail~vG~i~~~pv~~~------g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~~ 344 (431)
||++.|+|||||||+||||+|+++++|++.+ |+++++++|+++++||||+|||..+++|++.++++.+.+
T Consensus 147 ~G~~~~tPIinppq~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~FL~~lk~~Le~p 222 (1113)
T 2xt6_A 147 LGTVHSVPRLMQGQGAIIGAGAMEYPAEFQGASEERIADLGIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLDD 222 (1113)
T ss_dssp ----------CTTCSEEEEECCCBCCTTSTTCCHHHHHHHTCCCEEEEEEEEETTTCCHHHHHHHHHHHHHHTTCH
T ss_pred CCCcceECCCCCCCceEEEcCccEEEeEEcCCCcccCCceeEeeeeEEEEEECcceechHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999876 579999999999999999999999999999999876543
No 10
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=100.00 E-value=3.2e-40 Score=312.30 Aligned_cols=198 Identities=13% Similarity=0.111 Sum_probs=169.9
Q ss_pred EEeccHH-HHHHHHHHHHhcccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccceee
Q psy14345 107 RVKMNRM-RQRIAQRLKEAQNVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVI 185 (431)
Q Consensus 107 ~vpls~~-Rk~ia~~m~~S~~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N~~~ 185 (431)
.+.+..- ||.--+-. .+ .++||+|++.+||+|+|+++|++ .++||++|++||++.||++||++|++|
T Consensus 10 ~id~~~W~R~~~f~~f-~~-~~~P~~t~~~evDvt~l~~~rk~----------~~ls~~~~~ikAv~~Al~~~P~~Na~~ 77 (219)
T 1q23_A 10 TVDISQWHRKEHFEAF-QS-VAQCTYNQTVQLDITAFLKTVKK----------NKHKFYPAFIHILARLMNAHPEFRMAM 77 (219)
T ss_dssp ECCGGGCTTHHHHHHH-TT-TTCEEEEEEEEEECHHHHHHHHH----------TTCCHHHHHHHHHHHHHTTCGGGSEEE
T ss_pred eECcccCCCHHHHHHh-cC-CCCcEEEEEEEEEhHHHHHHHHH----------cCCCHHHHHHHHHHHHHHhChHhhEEE
Confidence 3434333 33333333 34 68999999999999999999865 379999999999999999999999999
Q ss_pred eCCeeEecCcccEEEEE-eecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcC-CCCc-ccC
Q psy14345 186 EGTDIVYRDYVDISVGM-GRNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNW-NLAI-EDS 262 (431)
Q Consensus 186 ~~~~i~~~~~v~igvav-~~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g-~L~~-~~~ 262 (431)
+++.|+++++||||+|| ++ + +||++||++. ..++ + .+|++++++++++|| +| +|++ +|+
T Consensus 78 ~~~~i~~~~~v~igiAV~~t-----~----~GL~~pvi~~-~~~~--l-----~~i~~~~~~l~~~ar-~~~kL~~~~~~ 139 (219)
T 1q23_A 78 KDGELVIWDSVHPCYTVFHE-----Q----TETFSSLWSE-YHDD--F-----RQFLHIYSQDVACYG-ENLAYFPKGFI 139 (219)
T ss_dssp ETTEEEEESCCEEEEEEEET-----T----TTEEEEEECC-CCSS--H-----HHHHHHHHHHHHHHT-TCCSSSTTCCC
T ss_pred ECCEEEEecccCeEEEEEec-----C----CcEEEEEEec-CCCC--H-----HHHHHHHHHHHHHHH-ccCCCCCcccc
Confidence 99999999999999999 99 8 9999999996 5689 9 999999999999999 88 6976 899
Q ss_pred CCceEEEecCCCCCccceeeccCCCc---ceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHh
Q psy14345 263 DGGTFTISNGGVFGSLLGTPIINPPQ---SAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAH 339 (431)
Q Consensus 263 ~ggTftiSn~G~~G~~~~~pii~ppq---~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~ 339 (431)
||||||||+||+|.+.+.+.+++|. ++|+++|+++++ +| +++|++++++|||+|||..+++|++.+++
T Consensus 140 -ggtftISnlG~~~ft~i~~~~~~~~~~~~pIi~~G~~~~~----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~ 210 (219)
T 1q23_A 140 -ENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQ----GD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQ 210 (219)
T ss_dssp -SSEEEEEECTTCCCSEEEEEESCCTTCCSCEEEECCCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred -CCEEEEEcCccccccccccCCCCCccceeEEEecccEEEE----CC----cEEEEEEEEEEchhhChHHHHHHHHHHHH
Confidence 9999999999987666665555442 599999999876 44 68999999999999999999999999998
Q ss_pred Hhhh
Q psy14345 340 LEAF 343 (431)
Q Consensus 340 l~~~ 343 (431)
+.+.
T Consensus 211 ~le~ 214 (219)
T 1q23_A 211 YCDE 214 (219)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6553
No 11
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00 E-value=7.6e-40 Score=308.59 Aligned_cols=181 Identities=12% Similarity=0.057 Sum_probs=163.7
Q ss_pred ccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccceeeeCCeeEecCcccEEEEE-ee
Q psy14345 126 NVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGTDIVYRDYVDISVGM-GR 204 (431)
Q Consensus 126 ~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N~~~~~~~i~~~~~v~igvav-~~ 204 (431)
.++||+|++.+||+|+|+++|++ .++||+++++||++.||++||++|++|+++.|++++++|||+|| ++
T Consensus 23 ~~~P~~~~~~evDvt~l~~~rk~----------~~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAVf~t 92 (213)
T 3cla_A 23 RLPCGFSLTSKIDITTLKKSLDD----------SAYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQ 92 (213)
T ss_dssp TSCCEEEEEEEEECHHHHHHHHT----------SSCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred CCCceEEEEEEEEHHHHHHHHHH----------hCCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeEEEEeC
Confidence 47999999999999999999864 47999999999999999999999999999999999999999999 99
Q ss_pred cCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhcC-CCCc-ccCCCceEEEecCCCCCccceee
Q psy14345 205 NESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLNW-NLAI-EDSDGGTFTISNGGVFGSLLGTP 282 (431)
Q Consensus 205 ~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~g-~L~~-~~~~ggTftiSn~G~~G~~~~~p 282 (431)
+ +||++||+++ +.++ + .+|++++++++++|| +| +|++ +|++||||||||+||++.+.++.
T Consensus 93 -----~----~GL~vpvi~~-~~~~--~-----~~i~~~~~~l~~~ar-~~~kL~~~~~~~ggtftISnlg~~~ft~i~~ 154 (213)
T 3cla_A 93 -----E----TETFSALSCP-YSSD--I-----DQFMVNYLSVMERYK-SDTKLFPQGVTPENHLNISALPWVNFDSFNL 154 (213)
T ss_dssp -----T----TTEEEEEECC-CCSS--H-----HHHHHHHHHHHHHHT-TCCSSSTTSSCCSSEEEEEEETTCCCSCCCC
T ss_pred -----C----CceEEEEEec-CCCC--H-----HHHHHHHHHHHHHHh-hcCCCCCCCCCCCCEEEEEcCCCCCcccccc
Confidence 8 9999999987 5689 9 999999999999999 85 9988 89999999999999998877754
Q ss_pred ccCCC---cceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhHhh
Q psy14345 283 IINPP---QSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHLEA 342 (431)
Q Consensus 283 ii~pp---q~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~ 342 (431)
.++.+ ..+|+++|+++++ +| +++|++++++|||+|||..+++|++.++++.+
T Consensus 155 ~~~~g~~~~~PIi~~G~~~~~----~~----~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 155 NVANFTDYFAPIITMAKYQQE----GD----RLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CCSCCTTCCSCEEEEECCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cCCCCCcccccEEEeeEEEEE----CC----eEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 44444 2489999999876 44 68999999999999999999999999997644
No 12
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.6e-38 Score=298.69 Aligned_cols=179 Identities=19% Similarity=0.180 Sum_probs=162.7
Q ss_pred ccceEEEEeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhCCccceeee-CCeeEecCcccEEEEE-e
Q psy14345 126 NVNAMLTTFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIE-GTDIVYRDYVDISVGM-G 203 (431)
Q Consensus 126 ~~iP~~t~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~P~~N~~~~-~~~i~~~~~v~igvav-~ 203 (431)
.++||+|++.+||+|+|+++|++ .++||+++++||++.||++||++|++|+ +++|++++++|||+|| +
T Consensus 25 ~~~P~~~~~~evDvt~l~~~rk~----------~~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~igvAVf~ 94 (217)
T 2i9d_A 25 FQNPQLSITSEVECGGARQRAKA----------AGQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIKI 94 (217)
T ss_dssp CSBCEEEEEEEEECHHHHHHHHH----------TTCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEEEEEEC
T ss_pred CCCceEEEEEEEEhHHHHHHHHH----------cCCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeEEEEEe
Confidence 57999999999999999999865 3799999999999999999999999999 8999999999999999 9
Q ss_pred ecCCCCCCccCCcEEEEeecCCCccccccccCChhHHHHHHHHHHhhhhhc-CCCCcc------cCCCceEEEecCCCCC
Q psy14345 204 RNESNLPRWCFNGLLSGVLVLTEHLNGKYCVSSRPSYERHTTGWACYDRLN-WNLAIE------DSDGGTFTISNGGVFG 276 (431)
Q Consensus 204 ~~~~~~~~~~~~gL~vpvi~~a~~~s~~l~~~~~~~i~~~~~~l~~~ar~~-g~L~~~------~~~ggTftiSn~G~~G 276 (431)
+ + +||++||+. ...++ + .+|++++++++++|| + |+|+++ |++||||||||+||++
T Consensus 95 t-----~----~GL~~pv~~-~~~~~--~-----~~i~~~~~~l~~~ar-~~~kL~~~~~~~~~e~~ggtftISnlg~~~ 156 (217)
T 2i9d_A 95 K-----E----NGKFFTTRF-PYHND--F-----DTFYQEARLIIDAIP-EDGDPYAAENEEVADGDYGLILLSATPDLY 156 (217)
T ss_dssp S-----T----TSCEEEEEE-CCCSS--H-----HHHHHHHHHHHHHCC-SSCCTTHHHHHHHHHTCCCEEEEEECTTCC
T ss_pred c-----C----CceEeEEEe-cCCCC--H-----HHHHHHHHHHHHHHH-hcCCCCCccccccccCCCCEEEEEcCCccc
Confidence 9 8 999999986 45788 9 999999999999999 8 699995 9999999999999999
Q ss_pred ccceeeccCCC---cceeeeccceeEEEeeeCCeEEEeeeeeeeeeeeeeeeehHHHHHHHHHHHhH
Q psy14345 277 SLLGTPIINPP---QSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLQKEAHL 340 (431)
Q Consensus 277 ~~~~~pii~pp---q~ail~vG~i~~~pv~~~g~~~~~~~m~lslt~DHRvIDg~~a~~fl~~lk~l 340 (431)
.+.++..++++ ..+|+++|++.++ +| +++|++++++|||+|||..+++|++.++++
T Consensus 157 ft~i~~~~~~g~~~~~PIi~~Gk~~~~----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~ 215 (217)
T 2i9d_A 157 FTSITGTQEKRSGNNYPLLNAGKAIIR----EG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDF 215 (217)
T ss_dssp CSEECCCBCSTTCCSSCEEEECCCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHH
T ss_pred cceeecCCCCCccceEEEEecceEEEE----CC----cEEEEEEEEecchhhChHHHHHHHHHHHHH
Confidence 88876655544 2589999999876 44 689999999999999999999999999864
No 13
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=99.88 E-value=1.4e-22 Score=195.53 Aligned_cols=105 Identities=33% Similarity=0.499 Sum_probs=97.5
Q ss_pred eehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeCCeeEEcCCcceEEEEecCCCeeeceec
Q psy14345 325 IDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGTDIVYRDYVDISVAVATPKGLVVPVIR 404 (431)
Q Consensus 325 IDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~~~i~~~~~vnigvAV~~~~GL~vPvi~ 404 (431)
||.+.+.++++++++. +.++.|.|+|+++|++||+++||++||++|++|+++.|+++++||||+||++++||+|||||
T Consensus 50 vDvt~l~~~r~~~k~~--~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~i~~~~~vnigiAV~t~~GL~vPvi~ 127 (256)
T 3mae_A 50 VDATGLVRYRNAVKDS--FKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTWAGDKIIEHANINISIAIAAGDLLYVPVIK 127 (256)
T ss_dssp EECHHHHHHHHHHHHH--HHHHHSSCCCHHHHHHHHHHHHHHHCTTTSEEEETTEEEECSSCCEEECCCCTTSCCCCEET
T ss_pred EEHHHHHHHHHHHHhh--hhhhcCCCccHHHHHHHHHHHHHHhCHHhhhEEecCEEEEcCcEEEEeEEEcCCceEEEEEc
Confidence 7788999999888742 23345889999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 405 NVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 405 ~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
|+|++|+.||++++++|++|||+|+|+
T Consensus 128 ~ad~~sl~ei~~~i~~l~~~Ar~gkL~ 154 (256)
T 3mae_A 128 NADEKSIKGIAREISELAGKARNGKLS 154 (256)
T ss_dssp TGGGSCHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999985
No 14
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=99.87 E-value=5e-22 Score=189.31 Aligned_cols=113 Identities=42% Similarity=0.696 Sum_probs=101.0
Q ss_pred eeeeeeeeeeeeeeehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeCCeeEEcCCcceEEE
Q psy14345 312 PMMYVALTYDHRLIDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGTDIVYRDYVDISVA 391 (431)
Q Consensus 312 ~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~~~i~~~~~vnigvA 391 (431)
|+++++.. +|.+.+.++++++++. +.++.|.|+|+++|++||++.||++||++|++|+++.|++++++|||+|
T Consensus 28 P~~~~~~e-----vdvt~l~~~r~~~k~~--~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~~~~~~i~~~~~v~igiA 100 (233)
T 1scz_A 28 AMLTTFNE-----VNMKPIMDLRKQYGEA--FEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMA 100 (233)
T ss_dssp CEEEEEEE-----EECHHHHHHHHHHHHH--HHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCEEETTEEECCSSCCEEEC
T ss_pred CEEEEEEE-----EEcHHHHHHHHHHHhh--hhhhcCCcccHHHHHHHHHHHHHHhChHhhEEEeCCEEEEeCceeEEEE
Confidence 45555444 6778899998887742 2334588999999999999999999999999999999999999999999
Q ss_pred EecCCCeeeceecCcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 392 VATPKGLVVPVIRNVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 392 V~~~~GL~vPvi~~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
|++++||+||||+||+++|+.||++++++|+++||+|+|+
T Consensus 101 V~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~ 140 (233)
T 1scz_A 101 VSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLT 140 (233)
T ss_dssp EEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCC
T ss_pred EEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999985
No 15
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=99.86 E-value=9.5e-22 Score=188.99 Aligned_cols=100 Identities=19% Similarity=0.251 Sum_probs=92.8
Q ss_pred eehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeC----CeeEEcCCcceEEEEecCCCeee
Q psy14345 325 IDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEG----TDIVYRDYVDISVAVATPKGLVV 400 (431)
Q Consensus 325 IDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~----~~i~~~~~vnigvAV~~~~GL~v 400 (431)
||.+.+.++++++++ .|.|+|+++|++||+++||++||++|++|++ +.|+++++||||+||++++||+|
T Consensus 46 vDvt~l~~~r~~~k~-------~~~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~vnigvAV~t~~GL~v 118 (250)
T 3l60_A 46 VICAELLRLRDRFVS-------AAPEITPFALTLRLLVIALKHNVILNSTWVDSGEGPQVHVHRGVHLGFGAATERGLLV 118 (250)
T ss_dssp EECHHHHHHHHHHTT-------TCTTCCHHHHHHHHHHHHHHHCGGGSEEEECTTTSCEEEECSSCCEEECEEETTEEEC
T ss_pred EEHHHHHHHHHHHhh-------cCCCCCHHHHHHHHHHHHHHhCHHhhEEEeccCCCCeEEEcCceeEEEEEEcCCCeEE
Confidence 677888888877752 3679999999999999999999999999975 49999999999999999999999
Q ss_pred ceecCcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 401 PVIRNVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 401 Pvi~~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
|||+|++++|+.||++++++|++|||+|+|+
T Consensus 119 Pvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~ 149 (250)
T 3l60_A 119 PVVTDAQDKNTRELASRVAELITGAREGTLT 149 (250)
T ss_dssp CEETTGGGCCHHHHHHHHHHHHHHHHHTCCC
T ss_pred eEEecCCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999985
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=99.86 E-value=8.8e-22 Score=186.58 Aligned_cols=108 Identities=25% Similarity=0.369 Sum_probs=97.3
Q ss_pred eeeeeeeeeeeeeeehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeCC--eeEEcCCcceE
Q psy14345 312 PMMYVALTYDHRLIDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGT--DIVYRDYVDIS 389 (431)
Q Consensus 312 ~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~~--~i~~~~~vnig 389 (431)
|+++++.. +|.+.+.++++++++ .|.|+|+++|++||+++||++||++|++|+++ .|++++++|||
T Consensus 30 P~~~~~~e-----vDvt~l~~~r~~~k~-------~g~kls~~~~~ikA~~~Al~~~P~~N~~~~~~~~~i~~~~~v~ig 97 (224)
T 3rqc_A 30 PHFTVMEE-----VDVTSMVSILDSAKA-------RNRKVTVTGFLARIVPSILKQYPYLNAIYDETRRVYILKKYYNIG 97 (224)
T ss_dssp CEEEEEEC-----CBTHHHHHHHHHHTT-------TTCCCCHHHHHHHHHHHHHHHSGGGSBBCCSSTTCCCEECSCCEE
T ss_pred CeEEEEEE-----EEHHHHHHHHHHHhh-------cCCCCCHHHHHHHHHHHHHHhCHHhheEEeCCCCEEEEeCccceE
Confidence 44444444 677888888887763 27899999999999999999999999999877 99999999999
Q ss_pred EEEecCCCeeeceecCcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 390 VAVATPKGLVVPVIRNVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 390 vAV~~~~GL~vPvi~~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
+||++++||+||||+|+|++|+.||++++++|+++||+|+|+
T Consensus 98 iAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~L~ 139 (224)
T 3rqc_A 98 IAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQ 139 (224)
T ss_dssp EEEECSSCEEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCCC
T ss_pred eEEEcCCceEEeEECCCCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999985
No 17
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=99.85 E-value=2.7e-21 Score=185.34 Aligned_cols=104 Identities=36% Similarity=0.536 Sum_probs=95.4
Q ss_pred eehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeC--CeeEEcCCcceEEEEecCCCeeece
Q psy14345 325 IDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEG--TDIVYRDYVDISVAVATPKGLVVPV 402 (431)
Q Consensus 325 IDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~--~~i~~~~~vnigvAV~~~~GL~vPv 402 (431)
+|.+.+.++++++++.. ++.|.|+|+++|++||++.||++||++|++|++ +.|+++++||||+||++++||+|||
T Consensus 47 vDvt~l~~~r~~~k~~~---~~~g~kls~~~~~ikA~~~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPv 123 (243)
T 1dpb_A 47 ADITELEAFRVAQKAVA---EKAGVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPV 123 (243)
T ss_dssp EECHHHHHHHHHTHHHH---HHTTCCCCSHHHHHHHHHHHHHHSGGGGEEECTTSSCEEECSSCCEEECEEETTEEECCE
T ss_pred EEhHHHHHHHHHHhhhh---hhccCCCChHHHHHHHHHHHHHhChHhhEEEecCCCeEEEeCceeEEEEEECCCcEEEEE
Confidence 67788999988877532 245889999999999999999999999999985 4999999999999999999999999
Q ss_pred ecCcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 403 IRNVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 403 i~~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
|+|+|++|+.||++++++|++|||+|+|+
T Consensus 124 i~~a~~~sl~ei~~~~~~l~~~ar~~kL~ 152 (243)
T 1dpb_A 124 IRNVDQKSLLQLAAEAAELAEKARSKKLG 152 (243)
T ss_dssp ETTGGGSCHHHHHHHHHHHHHHHHTTCCC
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999985
No 18
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=99.85 E-value=3.5e-21 Score=186.36 Aligned_cols=104 Identities=28% Similarity=0.489 Sum_probs=95.9
Q ss_pred eehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeC--CeeEEcCCcceEEEEecCCCeeece
Q psy14345 325 IDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEG--TDIVYRDYVDISVAVATPKGLVVPV 402 (431)
Q Consensus 325 IDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~--~~i~~~~~vnigvAV~~~~GL~vPv 402 (431)
+|.+.+.++++++++. .++.|.|+|+++|++||++.||++||++|++|++ +.|++++++|||+||++++||+|||
T Consensus 62 vDvt~l~~~r~~~k~~---~~~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPv 138 (262)
T 2ii3_A 62 VDLTELVKLREELKPI---AFARGIKLSFMPFFLKAASLGLLQFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPN 138 (262)
T ss_dssp EECHHHHHHHHHHHHH---HHHTTCCCCSHHHHHHHHHHHHHHCGGGSEEECTTSCEEEECSSCCEEECEEETTEEECCE
T ss_pred EEhHHHHHHHHHHhhh---hhhccCCccHHHHHHHHHHHHHHhChHhhEEEeCCCCEEEEecccceEEEEEcCCCEEEEE
Confidence 7889999998888752 2345889999999999999999999999999975 4899999999999999999999999
Q ss_pred ecCcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 403 IRNVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 403 i~~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
|+||+++|+.||++++++|+++||+|+|+
T Consensus 139 i~~a~~~sl~ei~~~~~~l~~~ar~~kL~ 167 (262)
T 2ii3_A 139 VKNVQIRSIFEIATELNRLQKLGSAGQLS 167 (262)
T ss_dssp ETTGGGCCHHHHHHHHHHHHHHHHHTCCC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999985
No 19
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=99.83 E-value=5.7e-21 Score=182.73 Aligned_cols=103 Identities=31% Similarity=0.365 Sum_probs=94.5
Q ss_pred eehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeCCeeEEcCCcceEEEEecCCCeeeceec
Q psy14345 325 IDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGTDIVYRDYVDISVAVATPKGLVVPVIR 404 (431)
Q Consensus 325 IDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~~~i~~~~~vnigvAV~~~~GL~vPvi~ 404 (431)
+|.+.+.++++++++.. + .+.|+|+++|++||+++||++||++|++|+++.|+++++||||+||++++||++|||+
T Consensus 44 vDvt~l~~~r~~~k~~~---~-~~~kls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igvAV~~~~GL~vPvi~ 119 (239)
T 3b8k_A 44 VNMGEVLLVRKELNKIL---E-GRSKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVF 119 (239)
T ss_dssp ECCTTHHHHHHHTHHHH---T-TSSCCCHHHHHHHHHHHHHHHCCCSCTTSCCCSSSCSCCCCEEECEECSSCEECCEEC
T ss_pred EEcHHHHHHHHHHHhhh---h-ccCCCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEeCceeEEEEEEcCCcEEEEEEc
Confidence 67788889988877421 1 1259999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 405 NVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 405 ~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
|+|++|+.||++++++|+++||+|+|+
T Consensus 120 ~a~~~~l~~i~~~~~~l~~~ar~~kL~ 146 (239)
T 3b8k_A 120 NAHIKGVETIANDVVSLATKAREGKLQ 146 (239)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999985
No 20
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=99.77 E-value=1.5e-18 Score=163.24 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=90.1
Q ss_pred eeeeeeeeeeeeeeeehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeCCeeEEcCCcceEE
Q psy14345 311 KPMMYVALTYDHRLIDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGTDIVYRDYVDISV 390 (431)
Q Consensus 311 ~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~~~i~~~~~vnigv 390 (431)
.|+++++..+ |.+.+.+++++ .++|++++++||++.||++||++|++|+++.|+++++||||+
T Consensus 25 ~P~~~~~~ev-----Dvt~l~~~rk~------------~~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igi 87 (213)
T 3cla_A 25 PCGFSLTSKI-----DITTLKKSLDD------------SAYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQF 87 (213)
T ss_dssp CCEEEEEEEE-----ECHHHHHHHHT------------SSCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEE
T ss_pred CceEEEEEEE-----EHHHHHHHHHH------------hCCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeE
Confidence 4667776664 55666665421 389999999999999999999999999999999999999999
Q ss_pred EE-ecCCCeeeceecCcccCCHHHHHHHHHHHHHHHHcC-CCC
Q psy14345 391 AV-ATPKGLVVPVIRNVEAMNFADIELTIAALGEKARTG-KYT 431 (431)
Q Consensus 391 AV-~~~~GL~vPvi~~a~~~~l~~ia~~~~~l~~~ar~g-~L~ 431 (431)
|| ++++||++||+++ +.+++.+|++++++|++|||+| +|+
T Consensus 88 AVf~t~~GL~vpvi~~-~~~~~~~i~~~~~~l~~~ar~~~kL~ 129 (213)
T 3cla_A 88 TVFHQETETFSALSCP-YSSDIDQFMVNYLSVMERYKSDTKLF 129 (213)
T ss_dssp EEEETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSS
T ss_pred EEEeCCCceEEEEEec-CCCCHHHHHHHHHHHHHHHhhcCCCC
Confidence 99 9999999999987 5699999999999999999996 884
No 21
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=99.76 E-value=3.3e-20 Score=191.26 Aligned_cols=104 Identities=34% Similarity=0.524 Sum_probs=0.0
Q ss_pred eehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeC--CeeEEcCCcceEEEEecCCCeeece
Q psy14345 325 IDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEG--TDIVYRDYVDISVAVATPKGLVVPV 402 (431)
Q Consensus 325 IDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~--~~i~~~~~vnigvAV~~~~GL~vPv 402 (431)
||.+.+..|++++++. .++.|.|+|+++|++||+++||++||++|++|++ +.|++++++|||+||++++||+|||
T Consensus 230 vDvt~l~~~rk~~~~~---~~~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPv 306 (428)
T 3dva_I 230 ADVTKLVAHRKKFKAI---AAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPV 306 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeHHHHHHHHHHhhhh---HhhcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCceEEee
Confidence 6778888888887743 2346889999999999999999999999999987 8999999999999999999999999
Q ss_pred ecCcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 403 IRNVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 403 i~~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
|||+++++|.||++++++|++|+|+|+|+
T Consensus 307 i~~a~~~sl~eia~~~~~l~~~ar~gkL~ 335 (428)
T 3dva_I 307 IKHADRKPIFALAQEINELAEKARDGKLT 335 (428)
T ss_dssp -----------------------------
T ss_pred eccCCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999985
No 22
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=99.76 E-value=2.8e-18 Score=161.99 Aligned_cols=103 Identities=14% Similarity=0.095 Sum_probs=90.2
Q ss_pred eeeeeeeeeeeeeeeehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeCCeeEEcCCcceEE
Q psy14345 311 KPMMYVALTYDHRLIDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGTDIVYRDYVDISV 390 (431)
Q Consensus 311 ~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~~~i~~~~~vnigv 390 (431)
.|+++++.. +|.+.+.+++++ .++|++++++||++.||++||++|++|+++.|+++++||||+
T Consensus 30 ~P~~t~~~e-----vDvt~l~~~rk~------------~~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igi 92 (219)
T 1q23_A 30 QCTYNQTVQ-----LDITAFLKTVKK------------NKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCY 92 (219)
T ss_dssp CEEEEEEEE-----EECHHHHHHHHH------------TTCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEE
T ss_pred CcEEEEEEE-----EEhHHHHHHHHH------------cCCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEecccCeEE
Confidence 356677666 455676666532 279999999999999999999999999999999999999999
Q ss_pred EE-ecCCCeeeceecCcccCCHHHHHHHHHHHHHHHHcC-CCC
Q psy14345 391 AV-ATPKGLVVPVIRNVEAMNFADIELTIAALGEKARTG-KYT 431 (431)
Q Consensus 391 AV-~~~~GL~vPvi~~a~~~~l~~ia~~~~~l~~~ar~g-~L~ 431 (431)
|| ++++||++||++. ..+++.+|++++++|++|||+| +|+
T Consensus 93 AV~~t~~GL~~pvi~~-~~~~l~~i~~~~~~l~~~ar~~~kL~ 134 (219)
T 1q23_A 93 TVFHEQTETFSSLWSE-YHDDFRQFLHIYSQDVACYGENLAYF 134 (219)
T ss_dssp EEEETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSS
T ss_pred EEEecCCcEEEEEEec-CCCCHHHHHHHHHHHHHHHHccCCCC
Confidence 99 9999999999997 5689999999999999999998 573
No 23
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=99.72 E-value=9.2e-18 Score=190.03 Aligned_cols=114 Identities=20% Similarity=0.236 Sum_probs=94.3
Q ss_pred eeeeeeeeeeeeeeeehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeeeCC----eeEEcCCc
Q psy14345 311 KPMMYVALTYDHRLIDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIEGT----DIVYRDYV 386 (431)
Q Consensus 311 ~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~~~----~i~~~~~v 386 (431)
.|+++++.. ||.+.+.++++.+++. +.++.|.|+|+++|++||++.||++||++|++|+++ .|+++++|
T Consensus 8 ~P~~t~~~e-----vDvt~l~~~R~~~k~~--~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~v 80 (1113)
T 2xt6_A 8 VPTATSVRA-----IPAKLMIDNRVVINNH--LKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAHT 80 (1113)
T ss_dssp CCEEEEEEE-----EECHHHHHHHHHHHHH--HHHTTCCCCCHHHHHHHHHHHHHHHCGGGGCEEEESSSSEEEECCSSC
T ss_pred CCeEEEEEE-----EehHHHHHHHHHHHhh--hhhhcCCCccHHHHHHHHHHHHHHhChHhhEEEeccCCCceEEEeCcc
Confidence 345555444 6778999999888752 233468899999999999999999999999999753 79999999
Q ss_pred ceEEEEecC--CC---eeeceecCcccCCHHHHHHHHHHHHHHHHcCCCC
Q psy14345 387 DISVAVATP--KG---LVVPVIRNVEAMNFADIELTIAALGEKARTGKYT 431 (431)
Q Consensus 387 nigvAV~~~--~G---L~vPvi~~a~~~~l~~ia~~~~~l~~~ar~g~L~ 431 (431)
|||+||+++ +| |+|||||||+++||.||++++++|++|||+|+|+
T Consensus 81 nigiAV~t~~~~G~~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~gkL~ 130 (1113)
T 2xt6_A 81 NLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLT 130 (1113)
T ss_dssp CEEEEC-----------CEEEECCGGGCCHHHHHHHHHHHHHHHTTTCCC
T ss_pred cEEEEEeccCCCCceeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcCCCC
Confidence 999999997 66 9999999999999999999999999999999985
No 24
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=2e-17 Score=155.80 Aligned_cols=103 Identities=13% Similarity=0.123 Sum_probs=89.5
Q ss_pred eeeeeeeeeeeeeeeehHHHHHHHHHHHhHhhhhhhcccccCCcchHHHHHHHHhhcCCccceeee-CCeeEEcCCcceE
Q psy14345 311 KPMMYVALTYDHRLIDGREAVLFLQKEAHLEAFQKKYGLKLGFMSPFIKASAYALQDQPVVNAVIE-GTDIVYRDYVDIS 389 (431)
Q Consensus 311 ~~~m~lslt~DHRvIDg~~a~~fl~~lk~l~~~~~~~~~klt~~~~~~ka~~~aL~~~P~~Na~~~-~~~i~~~~~vnig 389 (431)
.|+++++.. +|.+.+.+++++ .++|++++++||+++||++||++|++|+ ++.|+++++||||
T Consensus 27 ~P~~~~~~e-----vDvt~l~~~rk~------------~~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~ig 89 (217)
T 2i9d_A 27 NPQLSITSE-----VECGGARQRAKA------------AGQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDML 89 (217)
T ss_dssp BCEEEEEEE-----EECHHHHHHHHH------------TTCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEE
T ss_pred CceEEEEEE-----EEhHHHHHHHHH------------cCCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeE
Confidence 466777666 455666665432 2799999999999999999999999999 8999999999999
Q ss_pred EEE-ecCCCeeeceecCcccCCHHHHHHHHHHHHHHHHc-CCCC
Q psy14345 390 VAV-ATPKGLVVPVIRNVEAMNFADIELTIAALGEKART-GKYT 431 (431)
Q Consensus 390 vAV-~~~~GL~vPvi~~a~~~~l~~ia~~~~~l~~~ar~-g~L~ 431 (431)
+|| ++++||++||+.. ..+++.+|++++++|++|||+ |+|+
T Consensus 90 vAVf~t~~GL~~pv~~~-~~~~~~~i~~~~~~l~~~ar~~~kL~ 132 (217)
T 2i9d_A 90 SPIKIKENGKFFTTRFP-YHNDFDTFYQEARLIIDAIPEDGDPY 132 (217)
T ss_dssp EEEECSTTSCEEEEEEC-CCSSHHHHHHHHHHHHHHCCSSCCTT
T ss_pred EEEEecCCceEeEEEec-CCCCHHHHHHHHHHHHHHHHhcCCCC
Confidence 999 9999999999874 568999999999999999999 5884
No 25
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=97.31 E-value=4e-05 Score=72.33 Aligned_cols=85 Identities=14% Similarity=0.133 Sum_probs=21.1
Q ss_pred cceeeeeecCCCCe-EecCceeEEEecCCCCCCC----C--CCCC--CCCCCCC--CCCC-CCCCC----C-CCCCCCCC
Q psy14345 11 KKFLLLASLEDGAT-VKAGQQLFKIKPTATSVVD----W--WSSP--EEGSSAQ--SRGY-SSSSS----S-SLCCCSSP 73 (431)
Q Consensus 11 ~~~~l~~~~~eGd~-v~VG~~L~~Ie~~~~~~a~----~--~~~~--~~~~~~~--~~~~-~~~~~----~-~~~~~~sp 73 (431)
+-.+..+.+++||+ |.+|++|++|+.+++..+. . .+++ ...+.+. +... ..... . ..+..++|
T Consensus 54 ~G~v~~i~v~~G~~~V~~G~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP 133 (229)
T 1zy8_K 54 DGILAKIVVEEGSKNIRLGSLIGLIVEEGEDWKHVEIPKDVGPPPPVSKPSEPRPSPEPQISIPVKKEHIPGTLRFRLSP 133 (229)
T ss_dssp ----------------------------------------------------------------------------CBCH
T ss_pred CeEEEEEEecCCCeeecCCCEEEEEeccCccccccccccccccccccccCCCcccccccccCCCcccccccccccccCCh
Confidence 44566778999996 9999999999854332100 0 0000 0000000 0000 00000 0 01123455
Q ss_pred CC-chhhhcCCCccccCCCCCCC
Q psy14345 74 SP-SLCYSSAIEAATVKLPPADP 95 (431)
Q Consensus 74 ~~-~lA~e~gIdl~~v~gtg~dv 95 (431)
.+ |||+|+||||+.|+|||.+.
T Consensus 134 ~vRklAre~gVDL~~V~GTGp~G 156 (229)
T 1zy8_K 134 AARNILEKHSLDASQGTATGPRG 156 (229)
T ss_dssp HHHHHHHHTTCCSSSSCCCSTTS
T ss_pred HHHHHHHHcCCCccccCCCCCCC
Confidence 55 99999999999999998554
No 26
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=92.57 E-value=0.085 Score=37.50 Aligned_cols=25 Identities=20% Similarity=0.197 Sum_probs=20.6
Q ss_pred CCCCC-chhhhcCCCccccCCCCCCC
Q psy14345 71 SSPSP-SLCYSSAIEAATVKLPPADP 95 (431)
Q Consensus 71 ~sp~~-~lA~e~gIdl~~v~gtg~dv 95 (431)
++|.+ ++|+|+|||++.++|||.+.
T Consensus 12 asP~aR~lA~e~gidl~~V~gtG~~G 37 (51)
T 1bal_A 12 LSPAIRRLLAEHNLDASAIKGTGVGG 37 (51)
T ss_dssp CCGGGTTHHHHTTCCTTSSCCCSTTS
T ss_pred CChHHHHHHHHcCCCccccCCCCCCC
Confidence 45555 89999999999999998543
No 27
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=89.78 E-value=0.077 Score=35.51 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=19.6
Q ss_pred CCCC-chhhhcCCCccccCCCCCCC
Q psy14345 72 SPSP-SLCYSSAIEAATVKLPPADP 95 (431)
Q Consensus 72 sp~~-~lA~e~gIdl~~v~gtg~dv 95 (431)
+|.+ ++|+|+|||++.++|||.+.
T Consensus 3 sP~ar~la~e~gidl~~v~gtG~~g 27 (40)
T 2eq7_C 3 MPAAERLMQEKGVSPAEVQGTGLGG 27 (40)
T ss_dssp CHHHHHHHHHTTCCTTTSCCCSSSS
T ss_pred CcHHHHHHHHhCCChhhcCCCCCCC
Confidence 3444 89999999999999998543
No 28
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=89.61 E-value=0.07 Score=39.12 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=20.8
Q ss_pred CCCCCC-chhhhcCCCccccCCCCCC
Q psy14345 70 CSSPSP-SLCYSSAIEAATVKLPPAD 94 (431)
Q Consensus 70 ~~sp~~-~lA~e~gIdl~~v~gtg~d 94 (431)
.++|.+ +||+|+|||++.++|||.+
T Consensus 9 ~aSPaaRrlA~e~gIdl~~V~GTG~~ 34 (58)
T 3rnm_E 9 LATPAVRNLAMENNIKLSEVVGSGKD 34 (58)
T ss_dssp CCCHHHHHHHHHTTCCGGGCCCCSGG
T ss_pred CcCHHHHHHHHHcCCCHHHCCCCCCC
Confidence 455665 9999999999999999854
No 29
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=89.55 E-value=0.075 Score=35.58 Aligned_cols=24 Identities=13% Similarity=0.140 Sum_probs=19.7
Q ss_pred CCCC-chhhhcCCCccccCCCCCCC
Q psy14345 72 SPSP-SLCYSSAIEAATVKLPPADP 95 (431)
Q Consensus 72 sp~~-~lA~e~gIdl~~v~gtg~dv 95 (431)
+|.+ ++|+|+|||++.++|||.+.
T Consensus 3 sP~ar~la~e~gidl~~v~gtG~~g 27 (40)
T 2eq8_C 3 APSIRRLARELGVDLTRLRGTGLAG 27 (40)
T ss_dssp CHHHHHHHHHHTCCGGGCCCCSTTS
T ss_pred ChHHHHHHHHhCCChhhcCCCCCCC
Confidence 3444 89999999999999998654
No 30
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=89.28 E-value=0.078 Score=35.68 Aligned_cols=24 Identities=17% Similarity=0.057 Sum_probs=19.9
Q ss_pred CCCC-chhhhcCCCccccCCCCCCC
Q psy14345 72 SPSP-SLCYSSAIEAATVKLPPADP 95 (431)
Q Consensus 72 sp~~-~lA~e~gIdl~~v~gtg~dv 95 (431)
+|.+ ++|+|+|||++.++|||.+.
T Consensus 4 sP~ar~la~e~gidl~~v~gtG~~g 28 (41)
T 2eq9_C 4 VPAARKLARELGIPIEEVPGSGPLG 28 (41)
T ss_dssp CHHHHHHHHHTTCCGGGSCCCSTTC
T ss_pred ChHHHHHHHHcCCChhhcCCCCCCC
Confidence 4444 89999999999999998654
No 31
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=86.31 E-value=0.17 Score=35.54 Aligned_cols=24 Identities=13% Similarity=0.158 Sum_probs=19.9
Q ss_pred CCCCC-chhhhcCCCccccCCCCCC
Q psy14345 71 SSPSP-SLCYSSAIEAATVKLPPAD 94 (431)
Q Consensus 71 ~sp~~-~lA~e~gIdl~~v~gtg~d 94 (431)
++|.+ ++|+|+|||++.++|||.+
T Consensus 9 asP~ar~la~e~gidl~~v~gtG~~ 33 (49)
T 1w85_I 9 AMPSVRKYAREKGVDIRLVQGTGKN 33 (49)
T ss_dssp CCHHHHHHHHHTTCCTTTSCCCSGG
T ss_pred CChHHHHHHHHcCCCccccCCCCCC
Confidence 45555 9999999999999999854
No 32
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=85.84 E-value=0.76 Score=35.57 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=14.0
Q ss_pred eeeeeecCCCCeEecCceeEEEecC
Q psy14345 13 FLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 13 ~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
.+..+.+++||.|..|++|++|+..
T Consensus 49 ~V~~~~v~~G~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 49 VVKELKVNVGDKVKTGSLIMIFEVE 73 (85)
T ss_dssp CCCEECSCTTCCBCTTSEEEEEECC
T ss_pred EEEEEEeCCCCEECCCCEEEEEEcC
Confidence 3444455666666666666666543
No 33
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=84.41 E-value=0.91 Score=34.06 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=26.1
Q ss_pred ccccccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 6 LKQNNKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 6 ~~~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
+...-+-.+..+++++||.|+.|++|++|+..
T Consensus 11 v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~ 42 (77)
T 1dcz_A 11 IPAPLAGTVSKILVKEGDTVKAGQTVLVLEAM 42 (77)
T ss_dssp EEBSSSCEEEEECCCTTCEECTTSEEEEEEET
T ss_pred EECCCCEEEEEEEcCCcCEEcCCCEEEEEEcc
Confidence 44455566777899999999999999999954
No 34
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.61 E-value=1.3 Score=35.46 Aligned_cols=25 Identities=24% Similarity=0.343 Sum_probs=17.5
Q ss_pred eeeeeecCCCCeEecCceeEEEecC
Q psy14345 13 FLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 13 ~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
-+...++++||.|+.|++|+.||..
T Consensus 23 ~i~~~~v~~Gd~V~~G~~L~~ie~~ 47 (98)
T 2dnc_A 23 NIVKWLKKEGEAVSAGDALCEIETD 47 (98)
T ss_dssp CEEEESSCTTCEECTTSEEEEEECS
T ss_pred EEEEEEcCCCCEeCCCCEEEEEEcc
Confidence 4455577777777777777777743
No 35
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=83.57 E-value=1 Score=33.39 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=25.1
Q ss_pred cccccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 7 KQNNKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 7 ~~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
...-+-.+...++++||.|+.|++|++|+..
T Consensus 9 ~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 39 (74)
T 2d5d_A 9 SAPMPGKVLRVLVRVGDRVRVGQGLLVLEAM 39 (74)
T ss_dssp ECSSCEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred ecCCCEEEEEEEcCCCCEeCCCCEEEEEecc
Confidence 3444556677899999999999999999954
No 36
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=83.27 E-value=0.96 Score=34.31 Aligned_cols=28 Identities=18% Similarity=0.162 Sum_probs=24.1
Q ss_pred cceeeeeecCCCCeEecCceeEEEecCC
Q psy14345 11 KKFLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 11 ~~~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
+-.+..+++++||.|+.|++|++|+...
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~~~ 41 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEGDK 41 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEESSS
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEcCC
Confidence 5567777999999999999999999543
No 37
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=82.88 E-value=1 Score=34.14 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=24.9
Q ss_pred ccccceeeeeecCCCCeEecCceeEEEecCC
Q psy14345 8 QNNKKFLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 8 ~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
..-+-.+..+.+++||.|..|++|++|+..+
T Consensus 48 Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~~ 78 (80)
T 1qjo_A 48 APFAGVVKELKVNVGDKVKTGSLIMIFEVEG 78 (80)
T ss_dssp BSSCEEEEECCCCTTCEECTTCCCEEEESCC
T ss_pred CCCCEEEEEEecCCCCEECCCCEEEEEEccC
Confidence 3344566677999999999999999999653
No 38
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=82.66 E-value=1.1 Score=33.04 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=22.8
Q ss_pred cceeeeeecCCCCeEecCceeEEEecC
Q psy14345 11 KKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 11 ~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
+-.+...++++||.|+.|++|++|+..
T Consensus 7 ~G~v~~~~v~~G~~V~~G~~l~~i~~~ 33 (72)
T 1z6h_A 7 AGNLWKVHVKAGDQIEKGQEVAILESM 33 (72)
T ss_dssp SEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred cEEEEEEEcCCcCEECCCCEEEEEECC
Confidence 345667799999999999999999964
No 39
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=82.50 E-value=1.5 Score=34.63 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=22.8
Q ss_pred ccceeeeeecCCCCeEecCceeEEEecCC
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
.+-.+....+++||.|+.|++|++||...
T Consensus 17 ~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K 45 (93)
T 1k8m_A 17 REVTVKEWYVKEGDTVSQFDSICEVQSDK 45 (93)
T ss_dssp CCEEEEEECCCTTCEECSSSCCEEEECSS
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEEcCC
Confidence 34455666999999999999999999544
No 40
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=81.04 E-value=1.3 Score=36.09 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=24.9
Q ss_pred ccccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 8 QNNKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 8 ~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
..-+-.+..+++++||.|+.|++|++|+..
T Consensus 6 a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 35 (116)
T 2k32_A 6 PQVSGVIVNKLFKAGDKVKKGQTLFIIEQD 35 (116)
T ss_dssp CSSCEEEEEECSCTTSEECTTCEEEEEECT
T ss_pred CcCCEEEEEEECCCcCEECCCCEEEEECHH
Confidence 344556777899999999999999999965
No 41
>2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens}
Probab=80.75 E-value=0.6 Score=35.39 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=20.6
Q ss_pred CCCCC-chhhhcCCCccccCCCCCCC
Q psy14345 71 SSPSP-SLCYSSAIEAATVKLPPADP 95 (431)
Q Consensus 71 ~sp~~-~lA~e~gIdl~~v~gtg~dv 95 (431)
++|.+ +||+|+||||..|++||.+.
T Consensus 18 aSPaaRklA~e~gidl~~V~GTG~~G 43 (70)
T 2coo_A 18 ATPAVRRLAMENNIKLSEVVGSGKDG 43 (70)
T ss_dssp SCHHHHHHHHHHTCCGGGSCCCSTTS
T ss_pred cCcHHHHHHHHhCCCccccCCCCCCC
Confidence 45555 99999999999999998543
No 42
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=80.67 E-value=0.98 Score=34.27 Aligned_cols=26 Identities=12% Similarity=0.193 Sum_probs=22.7
Q ss_pred eeeeeecCCCCeEecCceeEEEecCC
Q psy14345 13 FLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 13 ~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
.+...++++||.|+.|++|++|+...
T Consensus 14 ~i~~~~v~~Gd~V~~G~~l~~le~~k 39 (79)
T 1iyu_A 14 EVIELLVKTGDLIEVEQGLVVLESAK 39 (79)
T ss_dssp EEEEECCCTTCBCCSSSEEEEEECSS
T ss_pred EEEEEecCCCCEEcCCCEEEEEEccc
Confidence 66677999999999999999999543
No 43
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=79.89 E-value=1.8 Score=33.55 Aligned_cols=29 Identities=14% Similarity=0.103 Sum_probs=22.9
Q ss_pred cceeeeeecCCCCeEecCceeEEEecCCC
Q psy14345 11 KKFLLLASLEDGATVKAGQQLFKIKPTAT 39 (431)
Q Consensus 11 ~~~~l~~~~~eGd~v~VG~~L~~Ie~~~~ 39 (431)
+-.+....+++||.|+.|++|+.||....
T Consensus 19 ~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~ 47 (87)
T 3crk_C 19 MGTVQRWEKKVGEKLSEGDLLAEIETDXA 47 (87)
T ss_dssp EEEEEEECSCTTCEECTTCEEEEEECSSC
T ss_pred cEEEEEEEcCCCCEEcCCCEEEEEECCcc
Confidence 34456669999999999999999996543
No 44
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=79.78 E-value=1.6 Score=36.92 Aligned_cols=18 Identities=22% Similarity=0.353 Sum_probs=9.0
Q ss_pred ecCCCCeEecCceeEEEe
Q psy14345 18 SLEDGATVKAGQQLFKIK 35 (431)
Q Consensus 18 ~~~eGd~v~VG~~L~~Ie 35 (431)
.+++||.|+.|++|+.||
T Consensus 48 ~V~~Gd~V~~Gd~L~~iE 65 (128)
T 1y8o_B 48 EKKVGEKLSEGDLLAEIE 65 (128)
T ss_dssp CSCTTCEECTTCEEEEEE
T ss_pred ecCCCCEecCCCEEEEEE
Confidence 444555555555555554
No 45
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=79.00 E-value=1.4 Score=34.22 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=19.6
Q ss_pred eecCCCC-eEecCceeEEEecCCC
Q psy14345 17 ASLEDGA-TVKAGQQLFKIKPTAT 39 (431)
Q Consensus 17 ~~~~eGd-~v~VG~~L~~Ie~~~~ 39 (431)
+.+++|+ .|.+|++|++|+.+++
T Consensus 62 ~~v~~G~~~V~~G~~l~~i~~~~~ 85 (87)
T 3crk_C 62 ILVPEGTRDVPLGTPLCIIVEKEA 85 (87)
T ss_dssp ESSCTTCCCEETTCEEEEEESSST
T ss_pred EEECCCCeEECCCCEEEEEEcccC
Confidence 5789999 8999999999996543
No 46
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=78.79 E-value=0.83 Score=37.40 Aligned_cols=24 Identities=8% Similarity=0.250 Sum_probs=15.0
Q ss_pred eeeeeecCCCCeEecCceeEEEec
Q psy14345 13 FLLLASLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 13 ~~l~~~~~eGd~v~VG~~L~~Ie~ 36 (431)
.+...++++||.|+.|++|++||.
T Consensus 23 ~v~~~~v~~Gd~V~~G~~L~~iE~ 46 (108)
T 2dne_A 23 TIARWEKKEGDKINEGDLIAEVET 46 (108)
T ss_dssp EEEECSSCTTCEECTTSEEEEEEC
T ss_pred EEEEEEcCCCCEecCCCEEEEEEc
Confidence 344446666666666666666663
No 47
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=78.60 E-value=1.1 Score=33.95 Aligned_cols=28 Identities=14% Similarity=0.154 Sum_probs=23.0
Q ss_pred cceeeeeecCCCCeEecCceeEEEecCC
Q psy14345 11 KKFLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 11 ~~~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
+-.+...++++||.|+.|++|++||...
T Consensus 15 ~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (79)
T 1ghj_A 15 DGTVATWHKKPGEAVKRDELIVDIETDK 42 (79)
T ss_dssp CEEECCCSSCTTSEECSSCEEEEEECSS
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEccc
Confidence 3455666999999999999999999543
No 48
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.54 E-value=1.4 Score=35.27 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=20.6
Q ss_pred eecCCCCeE-ecCceeEEEecCCCC
Q psy14345 17 ASLEDGATV-KAGQQLFKIKPTATS 40 (431)
Q Consensus 17 ~~~~eGd~v-~VG~~L~~Ie~~~~~ 40 (431)
+.+++||.| .+|++|++|+..++.
T Consensus 64 i~v~~G~~Vv~~G~~l~~i~~~~~~ 88 (98)
T 2dnc_A 64 IVVEEGSKNIRLGSLIGLIVEEGED 88 (98)
T ss_dssp CSSCTTCCCEESSCEEEEEECTTSC
T ss_pred EEeCCCCEEcCCCCEEEEEecCCCc
Confidence 578999998 999999999976543
No 49
>2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K
Probab=78.26 E-value=0.38 Score=35.84 Aligned_cols=25 Identities=12% Similarity=0.150 Sum_probs=20.2
Q ss_pred CCCCC-chhhhcCCCccccCCCCCCC
Q psy14345 71 SSPSP-SLCYSSAIEAATVKLPPADP 95 (431)
Q Consensus 71 ~sp~~-~lA~e~gIdl~~v~gtg~dv 95 (431)
++|.+ ++|+|+|||++.|+|||.+.
T Consensus 12 asPaaRklA~e~gidl~~V~GTG~~G 37 (64)
T 2f60_K 12 LSPAARNILEKHSLDASQGTATGPRG 37 (64)
T ss_dssp BCHHHHHHHHHTTCCGGGSCCCSGGG
T ss_pred CCcHHHHHHHHcCCChhhcCCCCCCC
Confidence 35555 89999999999999998543
No 50
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=77.73 E-value=1.8 Score=34.25 Aligned_cols=28 Identities=14% Similarity=0.106 Sum_probs=23.3
Q ss_pred eeeeeecCCCCeEecCceeEEEecCCCC
Q psy14345 13 FLLLASLEDGATVKAGQQLFKIKPTATS 40 (431)
Q Consensus 13 ~~l~~~~~eGd~v~VG~~L~~Ie~~~~~ 40 (431)
.+..+.+++||.|.+|++|++|+.++..
T Consensus 57 ~V~~i~v~~G~~V~~G~~l~~i~~~~~~ 84 (93)
T 1k8m_A 57 VIKKLYYNLDDIAYVGKPLVDIETEALK 84 (93)
T ss_dssp EEEEECCCSSCEECTTSEEEEEECSCCT
T ss_pred EEEEEEcCCCCEeCCCCEEEEEecCCCc
Confidence 4556789999999999999999976554
No 51
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=77.16 E-value=1.5 Score=35.81 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=19.8
Q ss_pred eecCCCC-eEecCceeEEEecCCC
Q psy14345 17 ASLEDGA-TVKAGQQLFKIKPTAT 39 (431)
Q Consensus 17 ~~~~eGd-~v~VG~~L~~Ie~~~~ 39 (431)
+.+++|+ .|.+|++|++|+..++
T Consensus 64 i~v~~G~~~V~~G~~l~~i~~~~~ 87 (108)
T 2dne_A 64 ILVAEGTRDVPIGAIICITVGKPE 87 (108)
T ss_dssp CSSCTTCCSEETTCEEEEEESCHH
T ss_pred EEeCCCCeeecCCCEEEEEecCcc
Confidence 5789999 8999999999996543
No 52
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=76.79 E-value=2.9 Score=31.53 Aligned_cols=30 Identities=20% Similarity=0.398 Sum_probs=24.2
Q ss_pred cccceeeeeecCCCCeEecCceeEEEecCC
Q psy14345 9 NNKKFLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 9 ~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
.-+-.+..+.+++|+.|..|++|++|+..+
T Consensus 47 p~~G~v~~~~v~~G~~V~~g~~l~~i~~~~ 76 (79)
T 1iyu_A 47 PKAGVVKSVSVKLGDKLKEGDAIIELEPAA 76 (79)
T ss_dssp SSSSEEEEESCCTTCEEETTSEEEEEECCC
T ss_pred CCCEEEEEEEeCCCCEECCCCEEEEEecCC
Confidence 344556667899999999999999998543
No 53
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=76.60 E-value=0.43 Score=35.26 Aligned_cols=24 Identities=21% Similarity=0.205 Sum_probs=19.7
Q ss_pred CCCC-chhhhcCCCccccCCCCCCC
Q psy14345 72 SPSP-SLCYSSAIEAATVKLPPADP 95 (431)
Q Consensus 72 sp~~-~lA~e~gIdl~~v~gtg~dv 95 (431)
+|.+ +||+|+||||+.|+|||.+.
T Consensus 8 sPaaRklA~e~gidl~~V~gtG~~G 32 (62)
T 1w4i_A 8 MPAARRLAKELGIDLSKVKGTGPGG 32 (62)
T ss_dssp CHHHHHHHHHHTCCGGGSCCCSTTS
T ss_pred ChHHHHHHHHhCCChhhcCCCCCCC
Confidence 4555 89999999999999998543
No 54
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=75.98 E-value=2.5 Score=31.93 Aligned_cols=28 Identities=21% Similarity=0.227 Sum_probs=22.8
Q ss_pred ccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
-+-.+..+.+++||.|..|++|++|+.+
T Consensus 51 ~~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (79)
T 1ghj_A 51 ADGVIAEIVKNEGDTVLSGELLGKLTEG 78 (79)
T ss_dssp SCEEEEEESSCTTCEECTTCEEEEECCC
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEecC
Confidence 3445666789999999999999999853
No 55
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.65 E-value=2 Score=34.30 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=24.6
Q ss_pred cccccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 7 KQNNKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 7 ~~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
...-+-.+..+.+++||.|+.|++|++|+..
T Consensus 21 ~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~ 51 (100)
T 2dn8_A 21 RSPSAGKLTQYTVEDGGHVEAGSSYAEMEVM 51 (100)
T ss_dssp ECSSCEEEEEESSCTTEEECTTCEEEEEEET
T ss_pred eCCCCEEEEEEEcCCcCEECCCCEEEEEEec
Confidence 3334445667799999999999999999954
No 56
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=75.14 E-value=1.6 Score=32.79 Aligned_cols=27 Identities=15% Similarity=0.272 Sum_probs=22.8
Q ss_pred cceeeeeecCCCCeEecCceeEEEecC
Q psy14345 11 KKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 11 ~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
+-.+..+++++||.|+.|++|++|+..
T Consensus 15 ~G~v~~~~v~~G~~V~~G~~l~~ie~~ 41 (77)
T 2l5t_A 15 EGEIVRWDVKEGDMVEKDQDLVEVMTD 41 (77)
T ss_dssp CEEEEECSCCTTCEECSCCCCCEEESS
T ss_pred cEEEEEEEeCCCCEECCCCEEEEEEcc
Confidence 445666699999999999999999954
No 57
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=74.55 E-value=1.8 Score=32.85 Aligned_cols=29 Identities=10% Similarity=0.248 Sum_probs=23.9
Q ss_pred ccceeeeeecCCCCeEecCceeEEEecCC
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
.+-.+...++++||.|+.|++|++||...
T Consensus 14 ~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (81)
T 1gjx_A 14 ENVDIIAVEVNVGDTIAVDDTLITLETDK 42 (81)
T ss_dssp SSEEEEEECCCSSCBCCSSCCCEEEECSS
T ss_pred CcEEEEEEEcCCCCEECCCCEEEEEEeCC
Confidence 34456677999999999999999999553
No 58
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=74.30 E-value=2.6 Score=31.83 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=10.2
Q ss_pred ecCCCCeEecCceeEEEe
Q psy14345 18 SLEDGATVKAGQQLFKIK 35 (431)
Q Consensus 18 ~~~eGd~v~VG~~L~~Ie 35 (431)
.+++||.|+.|++|++|+
T Consensus 26 ~v~~G~~V~~G~~l~~ie 43 (80)
T 1bdo_A 26 FIEVGQKVNVGDTLCIVE 43 (80)
T ss_dssp SCCTTCEECTTCEEEEEE
T ss_pred ccCCcCEECCCCEEEEEE
Confidence 455555555555555554
No 59
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=73.18 E-value=3.3 Score=30.97 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=21.8
Q ss_pred ccceeeeeecCCCCeEecCceeEEEe
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIK 35 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie 35 (431)
-+-.+..+.+++||.|..|++|++|+
T Consensus 51 ~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 51 VRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp CCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred CCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 34456667899999999999999997
No 60
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=72.51 E-value=2.8 Score=33.34 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.2
Q ss_pred ccccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 8 QNNKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 8 ~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
..-+-.+..+++++||.|+.|++|++|+..
T Consensus 19 a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~ 48 (99)
T 2ejm_A 19 APMTGTIEKVFVKAGDKVKAGDSLMVMIAM 48 (99)
T ss_dssp CSSSEEEEEECCCTTEEECSSCEEEEEESS
T ss_pred cCCCEEEEEEECCCCCEECCCCEEEEEEcc
Confidence 334455677799999999999999999954
No 61
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=72.15 E-value=2.7 Score=32.41 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=25.1
Q ss_pred cccccceeeeeecCCCCeEecCceeEEEecCC
Q psy14345 7 KQNNKKFLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 7 ~~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
...-.-.+..+.+++||.|+.|++|+.|+...
T Consensus 9 ~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 40 (84)
T 2kcc_A 9 RSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMK 40 (84)
T ss_dssp CCSSSCCEEEESSCTTEEECTTCEEEEEECSS
T ss_pred ECCCCEEEEEEECCCCCEECCCCEEEEEEecc
Confidence 33444456677999999999999999999543
No 62
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=71.54 E-value=2.5 Score=33.39 Aligned_cols=28 Identities=21% Similarity=0.350 Sum_probs=23.0
Q ss_pred ccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
-+-.+..+.+++||.|+.|++|++|+..
T Consensus 32 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~ 59 (94)
T 2jku_A 32 MPGVVVAVSVKPGDAVAEGQEICVIEAM 59 (94)
T ss_dssp SSCEEEEECCCTTCCCCTTCCCEEEEC-
T ss_pred CCEEEEEEECCCCCEEcCCCEEEEEecc
Confidence 3445667799999999999999999954
No 63
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=70.99 E-value=3.1 Score=35.17 Aligned_cols=25 Identities=20% Similarity=0.246 Sum_probs=20.8
Q ss_pred eeecCCCC-eEecCceeEEEecCCCC
Q psy14345 16 LASLEDGA-TVKAGQQLFKIKPTATS 40 (431)
Q Consensus 16 ~~~~~eGd-~v~VG~~L~~Ie~~~~~ 40 (431)
.+.+++|| +|++|++|++|+..++.
T Consensus 83 ~i~v~~Gd~~V~~G~~L~~i~~~~~~ 108 (128)
T 1y8o_B 83 KILVPEGTRDVPLGTPLCIIVEKEAD 108 (128)
T ss_dssp EESSCTTCCSEETTCEEEEEESSGGG
T ss_pred EEEeCCCCeeecCCCEEEEEecCccc
Confidence 35789998 89999999999966543
No 64
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=69.56 E-value=2.3 Score=32.30 Aligned_cols=26 Identities=15% Similarity=0.134 Sum_probs=21.6
Q ss_pred ccceeeeeecCCCCeEecCceeEEEe
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIK 35 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie 35 (431)
.+-.+...++++||.|+.|++|++||
T Consensus 15 ~~G~v~~~~v~~Gd~V~~G~~l~~ie 40 (80)
T 1pmr_A 15 ADATVATWHKKPGDAVVRDEVLVEIE 40 (80)
T ss_dssp SCEECCBCCCCTTCCBSSSCCBCBCC
T ss_pred ccEEEEEEECCCcCEECCCCEEEEEE
Confidence 34455666999999999999999998
No 65
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=68.46 E-value=3.6 Score=31.02 Aligned_cols=18 Identities=28% Similarity=0.405 Sum_probs=15.2
Q ss_pred ecCCCCeEecCceeEEEe
Q psy14345 18 SLEDGATVKAGQQLFKIK 35 (431)
Q Consensus 18 ~~~eGd~v~VG~~L~~Ie 35 (431)
.+++|+.|..|++|++|+
T Consensus 63 ~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 63 LVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp CSCTTCEECTTCEEEEEC
T ss_pred EcCCCCEECCCCEEEEEC
Confidence 357899999999999885
No 66
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=67.48 E-value=1.3 Score=33.80 Aligned_cols=23 Identities=26% Similarity=0.291 Sum_probs=17.4
Q ss_pred eeeeecCCCCeEecCceeEEEec
Q psy14345 14 LLLASLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 14 ~l~~~~~eGd~v~VG~~L~~Ie~ 36 (431)
+..+.+++||.|..|++|++|+.
T Consensus 56 v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 56 LDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCBCTTCTTCEECSSSEEEBCCC
T ss_pred EEEEEcCCcCEECCCCEEEEEec
Confidence 44457788888888888888764
No 67
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=66.40 E-value=5.2 Score=29.20 Aligned_cols=28 Identities=14% Similarity=0.298 Sum_probs=23.0
Q ss_pred cccceeeeeecCCCCeEecCceeEEEec
Q psy14345 9 NNKKFLLLASLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 9 ~~~~~~l~~~~~eGd~v~VG~~L~~Ie~ 36 (431)
.-+-.+..+.+++|+.|..|++|++|..
T Consensus 42 p~~G~v~~~~v~~G~~V~~G~~l~~i~~ 69 (72)
T 1z6h_A 42 DRSGIVKEVKKKEGDFVNEGDVLLELSN 69 (72)
T ss_dssp SSCEEEEEESSCTTCEECTTCEEEEEGG
T ss_pred CCCcEEEEEecCCCCEECCCCEEEEEeC
Confidence 3345666678999999999999999974
No 68
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=64.03 E-value=3.8 Score=38.27 Aligned_cols=32 Identities=22% Similarity=0.591 Sum_probs=26.0
Q ss_pred ccccccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 6 LKQNNKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 6 ~~~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
+...-+-.+..+++++||.|+.|++|++|+..
T Consensus 25 v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~ 56 (277)
T 2f1m_A 25 VRPQVSGIILKRNFKEGSDIEAGVSLYQIDPA 56 (277)
T ss_dssp ECCSSCEEEEEECSCTTCEECTTSCSEEECCH
T ss_pred EEccccEEEEEEEcCCCCEecCCCEEEEECcH
Confidence 34445667778899999999999999999943
No 69
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=61.66 E-value=1.3 Score=34.24 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=21.7
Q ss_pred eeeeeecCCCCeEecCceeEEEecCC
Q psy14345 13 FLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 13 ~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
.+..+++++||.|+.|++|++|+...
T Consensus 12 ~v~~~~v~~Gd~V~~G~~L~~ie~~k 37 (85)
T 2k7v_A 12 EVTEVMVKVGDKVAAEQSLITVEGDK 37 (85)
T ss_dssp CCCSCCCSSSCCCCCSSSCCCCSCCC
T ss_pred EEEEEEcCCCCEEcCCCEEEEEEccc
Confidence 34556899999999999999999543
No 70
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=61.52 E-value=6.1 Score=34.41 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=18.5
Q ss_pred eecCCCCeEecCceeEEEec
Q psy14345 17 ASLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 17 ~~~~eGd~v~VG~~L~~Ie~ 36 (431)
.+|++||+|+.|++|++++.
T Consensus 93 ~~V~~Gd~V~~G~~L~~~d~ 112 (154)
T 2gpr_A 93 SFVTQDQEVNAGDKLVTVDL 112 (154)
T ss_dssp ECCCTTCEECTTCEEEEECH
T ss_pred EEEcCCCEEcCCCEEEEECH
Confidence 57999999999999999993
No 71
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=60.16 E-value=5.9 Score=38.13 Aligned_cols=30 Identities=30% Similarity=0.193 Sum_probs=24.8
Q ss_pred ccccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 8 QNNKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 8 ~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
..-+-.+..+++++||.|+.|++|++|+..
T Consensus 36 ~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~ 65 (341)
T 3fpp_A 36 AQVSGQLKTLSVAIGDKVKKDQLLGVIDPE 65 (341)
T ss_dssp CSSCEEEEEECCCTTCEECTTCEEEEECCH
T ss_pred ccCCcEEEEEEeCCCCEECCCCEEEEEChH
Confidence 344556778899999999999999999943
No 72
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=59.86 E-value=11 Score=29.80 Aligned_cols=31 Identities=10% Similarity=0.138 Sum_probs=24.4
Q ss_pred ccceeeeeecCCCCeEecCceeEEEecCCCC
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIKPTATS 40 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie~~~~~ 40 (431)
.+-.+....+++|+.|..|++|++|......
T Consensus 58 ~~G~V~~~~v~~G~~V~~G~~L~~i~~~~~~ 88 (99)
T 2ejm_A 58 KDGTVKKVFYREGAQANRHTPLVEFEEEESD 88 (99)
T ss_dssp SCEEEEEESCCTTEEECTTCBCEEECCCCSC
T ss_pred CCeEEEEEEcCCCCEECCCCEEEEEECCCcc
Confidence 3445666789999999999999999965443
No 73
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=59.54 E-value=6.5 Score=29.13 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=21.8
Q ss_pred cccceeeeeecCCCCeEecCceeEEEe
Q psy14345 9 NNKKFLLLASLEDGATVKAGQQLFKIK 35 (431)
Q Consensus 9 ~~~~~~l~~~~~eGd~v~VG~~L~~Ie 35 (431)
.-+-.+....+++|+.|..|++|++|+
T Consensus 51 p~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 51 PTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp SSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 334456667899999999999999985
No 74
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=59.31 E-value=8.2 Score=28.17 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=21.7
Q ss_pred cccceeeeeecCCCCeEecCceeEEEe
Q psy14345 9 NNKKFLLLASLEDGATVKAGQQLFKIK 35 (431)
Q Consensus 9 ~~~~~~l~~~~~eGd~v~VG~~L~~Ie 35 (431)
.-+-.+..+.+++|+.|..|++|++|+
T Consensus 48 p~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 48 PRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp SSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 334456667889999999999999985
No 75
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=57.40 E-value=6.1 Score=35.43 Aligned_cols=21 Identities=33% Similarity=0.477 Sum_probs=18.9
Q ss_pred eeecCCCCeEecCceeEEEec
Q psy14345 16 LASLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 16 ~~~~~eGd~v~VG~~L~~Ie~ 36 (431)
..+|++||+|+.|++|++++.
T Consensus 119 ~~~V~~Gd~Vk~Gd~L~~fD~ 139 (183)
T 3our_B 119 TRIAEEGQTVKAGDTVIEFDL 139 (183)
T ss_dssp EECSCTTCEECTTCEEEEECH
T ss_pred eEEEeCcCEEcCCCEEEEECH
Confidence 458999999999999999994
No 76
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=57.34 E-value=5.3 Score=30.14 Aligned_cols=28 Identities=7% Similarity=0.156 Sum_probs=22.7
Q ss_pred ccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 10 NKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
-+-.+..+.+++||.|..|++|++|+..
T Consensus 51 ~~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (81)
T 1gjx_A 51 VAGVVKEVKVKVGDKISEGGLIVVVEAE 78 (81)
T ss_dssp CSSBBCCCCCCSSCEECSSSCCCEECCS
T ss_pred CCEEEEEEecCCCCEeCCCCEEEEEEec
Confidence 3445556789999999999999999854
No 77
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=57.01 E-value=7.1 Score=37.88 Aligned_cols=30 Identities=27% Similarity=0.269 Sum_probs=24.9
Q ss_pred cccccceeeeeecCCCCeEecCceeEEEec
Q psy14345 7 KQNNKKFLLLASLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 7 ~~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~ 36 (431)
...-+-.+..+++++||.|+.|++|++|+.
T Consensus 61 ~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~ 90 (359)
T 3lnn_A 61 LPPLAGRIVSLNKQLGDEVKAGDVLFTIDS 90 (359)
T ss_dssp CCSSCEEEEECCSCTTCEECTTCEEEEEEC
T ss_pred eccCCEEEEEEEcCCCCEEcCCCEEEEECh
Confidence 344455677789999999999999999995
No 78
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=51.34 E-value=7.9 Score=37.99 Aligned_cols=30 Identities=37% Similarity=0.678 Sum_probs=24.9
Q ss_pred cccccceeeeeecCCCCeEecCceeEEEec
Q psy14345 7 KQNNKKFLLLASLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 7 ~~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~ 36 (431)
...-+-++..+++++||.|+.|++|++|+.
T Consensus 47 ~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~ 76 (369)
T 1vf7_A 47 RPQVNGIILKRLFKEGSDVKAGQQLYQIDP 76 (369)
T ss_dssp CCSSCEEEEECCSCSSEEECTTSEEEEECC
T ss_pred EeeCceEEEEEEcCCCCEEcCCCEEEEECc
Confidence 344456677789999999999999999994
No 79
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=47.63 E-value=11 Score=33.05 Aligned_cols=19 Identities=26% Similarity=0.473 Sum_probs=17.8
Q ss_pred ecCCCCeEecCceeEEEec
Q psy14345 18 SLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 18 ~~~eGd~v~VG~~L~~Ie~ 36 (431)
+|++||+|+.|++|++++.
T Consensus 99 ~V~~Gd~V~~G~~L~~~d~ 117 (161)
T 1f3z_A 99 IAEEGQRVKVGDTVIEFDL 117 (161)
T ss_dssp CSCTTCEECTTCEEEEECH
T ss_pred EEeCcCEECCCCEEEEECH
Confidence 7999999999999999993
No 80
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=47.37 E-value=13 Score=37.21 Aligned_cols=29 Identities=17% Similarity=0.267 Sum_probs=24.4
Q ss_pred cccccceeeeeec-CCCCeEecCceeEEEe
Q psy14345 7 KQNNKKFLLLASL-EDGATVKAGQQLFKIK 35 (431)
Q Consensus 7 ~~~~~~~~l~~~~-~eGd~v~VG~~L~~Ie 35 (431)
...-+-++..++| ++||.|+.|++|++|+
T Consensus 125 ~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld 154 (413)
T 3ne5_B 125 QARAAGFIDKVYPLTVGDKVQKGTPLLDLT 154 (413)
T ss_dssp CCSSCEEEEEECSCCTTCEECTTCEEEEEE
T ss_pred ecccCEEEEEEEeCCCCCEEcCCCEEEEEc
Confidence 3444567777898 9999999999999999
No 81
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=47.02 E-value=6.8 Score=38.11 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=25.2
Q ss_pred cccccceeeeeecCCCCeEecCceeEEEecC
Q psy14345 7 KQNNKKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 7 ~~~~~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
...-+-.+..+++++||.|+.|++|++|+..
T Consensus 36 ~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 66 (369)
T 4dk0_A 36 GAQVSGKITKLYVKLGQQVKKGDLLAEIDST 66 (369)
T ss_dssp CCCSCSBCCEECCCTTSCCCSSCCCEECCCH
T ss_pred ecCCCcEEEEEEECCCCEECCCCEEEEEcCH
Confidence 3344556777899999999999999999943
No 82
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.05 E-value=18 Score=28.44 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=21.3
Q ss_pred cceeeeeecCCCCeEecCceeEEEecC
Q psy14345 11 KKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 11 ~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
+-.+. ..+++||.|..|++|++|+..
T Consensus 62 ~G~V~-~~v~~G~~V~~G~~l~~i~~~ 87 (100)
T 2dn8_A 62 RGRVK-YIKRPGAVLEAGCVVARLELD 87 (100)
T ss_dssp SEEEE-ECSCTTCEECSSCEEEEECCS
T ss_pred CEEEE-EEeCCCCEECCCCEEEEEEcC
Confidence 33444 788999999999999999854
No 83
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=44.19 E-value=15 Score=28.07 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=20.7
Q ss_pred cceeeeeecCCCCeEecCceeEEEecC
Q psy14345 11 KKFLLLASLEDGATVKAGQQLFKIKPT 37 (431)
Q Consensus 11 ~~~~l~~~~~eGd~v~VG~~L~~Ie~~ 37 (431)
+-.+..+. ++|+.|..|++|++|+..
T Consensus 50 ~G~v~~~~-~~G~~V~~G~~l~~i~~~ 75 (84)
T 2kcc_A 50 RGRVKYIK-RPGAVLEAGCVVARLELD 75 (84)
T ss_dssp SEEEEECS-CTTCCCCTTCCCEEEECS
T ss_pred CEEEEEEc-CCCCEECCCCEEEEEeCC
Confidence 34455557 999999999999999854
No 84
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=43.99 E-value=10 Score=33.25 Aligned_cols=19 Identities=26% Similarity=0.566 Sum_probs=17.9
Q ss_pred ecCCCCeEecCceeEEEec
Q psy14345 18 SLEDGATVKAGQQLFKIKP 36 (431)
Q Consensus 18 ~~~eGd~v~VG~~L~~Ie~ 36 (431)
+|++||+|+.|++|++++.
T Consensus 99 ~V~~Gd~V~~G~~L~~~d~ 117 (162)
T 1ax3_A 99 FVSEGDRVEPGQKLLEVDL 117 (162)
T ss_dssp SCCCCSEECSEEEEEEECH
T ss_pred EEeCCCEEcCCCEEEEECH
Confidence 7999999999999999994
No 85
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=40.19 E-value=6 Score=36.73 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=0.0
Q ss_pred eeeeecCCCCeEecCceeEEEecCCC
Q psy14345 14 LLLASLEDGATVKAGQQLFKIKPTAT 39 (431)
Q Consensus 14 ~l~~~~~eGd~v~VG~~L~~Ie~~~~ 39 (431)
+...++++||.|+.|++|++||+...
T Consensus 20 I~~w~vk~Gd~V~~Gd~L~~iEtdK~ 45 (229)
T 1zy8_K 20 IVKWLKKEGEAVSAGDALCEIETDKA 45 (229)
T ss_dssp --------------------------
T ss_pred EEEEecCCCCEeCCCCEEEEEecCCc
Confidence 45568999999999999999996543
No 86
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=38.63 E-value=6.5 Score=30.86 Aligned_cols=25 Identities=20% Similarity=0.275 Sum_probs=0.0
Q ss_pred cceeeeeecCCCCeEecCceeEEEe
Q psy14345 11 KKFLLLASLEDGATVKAGQQLFKIK 35 (431)
Q Consensus 11 ~~~~l~~~~~eGd~v~VG~~L~~Ie 35 (431)
+-.+..+.+++|+.|..|++|++|+
T Consensus 70 ~G~V~~~~v~~G~~V~~G~~L~~ie 94 (94)
T 2jku_A 70 TGTVKSVHCQAGDTVGEGDLLVELE 94 (94)
T ss_dssp -------------------------
T ss_pred CEEEEEEcCCCcCEECCCCEEEEEC
Confidence 3445556789999999999999985
No 87
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=37.61 E-value=18 Score=38.86 Aligned_cols=25 Identities=28% Similarity=0.450 Sum_probs=21.4
Q ss_pred eeeeecCCCCeEecCceeEEEecCC
Q psy14345 14 LLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 14 ~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
++...|++||+|+.|++|+.||.-.
T Consensus 623 v~~~~v~~Gd~V~~g~~l~~iEamK 647 (681)
T 3n6r_A 623 IVKVDVEVGQEVQEGQALCTIEAMK 647 (681)
T ss_dssp EEEECCCTTCEECTTCEEEEEECSS
T ss_pred EEEEEeCCCCEEcCCCEEEEEEecC
Confidence 4566899999999999999999544
No 88
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=29.56 E-value=37 Score=27.10 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=23.2
Q ss_pred ccceeeeeecCCCCeEecC-ceeEEEecCC
Q psy14345 10 NKKFLLLASLEDGATVKAG-QQLFKIKPTA 38 (431)
Q Consensus 10 ~~~~~l~~~~~eGd~v~VG-~~L~~Ie~~~ 38 (431)
-+-++....+++|+.|..| ++|++|....
T Consensus 74 ~~G~V~~~~~~~G~~v~~g~~~l~~i~~~~ 103 (116)
T 2k32_A 74 FDGTIGDALVNIGDYVSASTTELVRVTNLN 103 (116)
T ss_dssp SSEEECCCSCCTTCEECTTTSCCEEEECSC
T ss_pred CCEEEEEEECCCCCEEcCCCcEEEEEECCC
Confidence 3445666689999999999 9999998543
No 89
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=27.86 E-value=1.1e+02 Score=31.61 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=29.7
Q ss_pred EeeeccchHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHhhC
Q psy14345 133 TFNEIDMSAIIEFRKAHLEAFQKKYGLKLGFMSPFIKASAYALQDQ 178 (431)
Q Consensus 133 ~~~evD~t~l~~~r~~l~~~~~~~~g~k~t~~~~~ikA~a~Al~~~ 178 (431)
....++-...-++++..| +..|.++|+++++.-|++.|+.++
T Consensus 280 ~~~~ls~~~t~~L~~~ck----~~~~~g~Tvt~~l~Aa~~~al~~~ 321 (519)
T 3fot_A 280 VIHKLSADESIDIVKAVK----TRLGPGFTISHLTQAAIVLALLDH 321 (519)
T ss_dssp EEEECCHHHHHHHHHHHH----HHTCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHHHHH----hcCCCCeeHHHHHHHHHHHHHHhh
Confidence 445555555555555433 234778999999999999999885
No 90
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=27.30 E-value=44 Score=28.24 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=18.3
Q ss_pred cCCCCeEecCceeEEEecCCC
Q psy14345 19 LEDGATVKAGQQLFKIKPTAT 39 (431)
Q Consensus 19 ~~eGd~v~VG~~L~~Ie~~~~ 39 (431)
.++||+|+.|++|+.||....
T Consensus 53 p~vGd~V~~Gd~l~~VEs~K~ 73 (136)
T 1zko_A 53 PEVGREVKKGEVVASIESVKA 73 (136)
T ss_dssp CCTTCEECTTCEEEEEEESSC
T ss_pred cCCCCEEeCCCEEEEEEEccE
Confidence 399999999999999996544
No 91
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=27.25 E-value=52 Score=27.57 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=18.3
Q ss_pred cCCCCeEecCceeEEEecCCC
Q psy14345 19 LEDGATVKAGQQLFKIKPTAT 39 (431)
Q Consensus 19 ~~eGd~v~VG~~L~~Ie~~~~ 39 (431)
.++|++|+.|++|+.||....
T Consensus 44 p~~G~~V~~g~~l~~vEs~K~ 64 (131)
T 1hpc_A 44 PEPGVSVTKGKGFGAVESVKA 64 (131)
T ss_dssp CCTTCEECBTSEEEEEEESSC
T ss_pred cCCCCEEeCCCEEEEEEecce
Confidence 399999999999999996544
No 92
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=26.43 E-value=34 Score=39.05 Aligned_cols=26 Identities=27% Similarity=0.245 Sum_probs=22.3
Q ss_pred eeeeeecCCCCeEecCceeEEEecCC
Q psy14345 13 FLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 13 ~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
-+..+.|++||+|+.|++|+.||.-.
T Consensus 1087 ~v~~~~v~~Gd~V~~G~~l~~ieamK 1112 (1150)
T 3hbl_A 1087 SVTEVKVSVGETVKANQPLLITEAMK 1112 (1150)
T ss_dssp EEEEECCCTTCEECTTCEEEEEESSS
T ss_pred EEEEEEeCCCCEECCCCEEEEEEecc
Confidence 34677999999999999999999544
No 93
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=24.96 E-value=41 Score=28.08 Aligned_cols=21 Identities=24% Similarity=0.340 Sum_probs=18.3
Q ss_pred cCCCCeEecCceeEEEecCCC
Q psy14345 19 LEDGATVKAGQQLFKIKPTAT 39 (431)
Q Consensus 19 ~~eGd~v~VG~~L~~Ie~~~~ 39 (431)
.++|++|+.|++|+.||....
T Consensus 44 p~vG~~V~~g~~l~~vEs~K~ 64 (128)
T 1onl_A 44 PEVGRVVEKGEAVAVVESVKT 64 (128)
T ss_dssp BCTTCEECTTCEEEEEEESSB
T ss_pred cCCCCEEeCCCEEEEEEEcce
Confidence 399999999999999996554
No 94
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=24.72 E-value=38 Score=39.02 Aligned_cols=26 Identities=23% Similarity=0.279 Sum_probs=22.2
Q ss_pred eeeeecCCCCeEecCceeEEEecCCC
Q psy14345 14 LLLASLEDGATVKAGQQLFKIKPTAT 39 (431)
Q Consensus 14 ~l~~~~~eGd~v~VG~~L~~Ie~~~~ 39 (431)
+....|++||+|+.|++|+.||.-+.
T Consensus 1178 v~~~~v~~Gd~V~~g~~l~~iEamK~ 1203 (1236)
T 3va7_A 1178 FWKPVAAVGDHVEAGDGVIIIEAMKT 1203 (1236)
T ss_dssp EEEESSCTTCEECSSCEEEEEEETTE
T ss_pred EEEEEcCCCCEECCCCEEEEEEecCc
Confidence 45679999999999999999996543
No 95
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=24.54 E-value=44 Score=27.92 Aligned_cols=21 Identities=33% Similarity=0.314 Sum_probs=18.4
Q ss_pred cCCCCeEecCceeEEEecCCC
Q psy14345 19 LEDGATVKAGQQLFKIKPTAT 39 (431)
Q Consensus 19 ~~eGd~v~VG~~L~~Ie~~~~ 39 (431)
.++|++|+.|++|+.||....
T Consensus 45 p~vG~~V~~g~~l~~vEs~K~ 65 (128)
T 3a7l_A 45 PEVGATVSAGDDCAVAESVKA 65 (128)
T ss_dssp CCTTCEECTTCEEEEEEESSC
T ss_pred cCCCCEEeCCCEEEEEEecce
Confidence 489999999999999996654
No 96
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=23.75 E-value=32 Score=37.22 Aligned_cols=27 Identities=22% Similarity=0.244 Sum_probs=22.7
Q ss_pred ceeeeeecCCCCeEecCceeEEEecCC
Q psy14345 12 KFLLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 12 ~~~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
-.+..+.|++||.|+.|++|+.||.-.
T Consensus 658 G~V~~v~V~~Gd~V~~Gq~L~~iEamK 684 (718)
T 3bg3_A 658 GKVIDIKVVAGAKVAKGQPLCVLSAMK 684 (718)
T ss_dssp EEEEEECSCTTCCBCTTCCCEEEESSS
T ss_pred eEEEEEEeCCCCeeCCCCEEEEEeccc
Confidence 346677999999999999999999543
No 97
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=21.60 E-value=1.4e+02 Score=23.49 Aligned_cols=41 Identities=7% Similarity=-0.040 Sum_probs=28.8
Q ss_pred EcCCcceEEEEecCCCee---eceecCcccCCHHHHHHHHHHHHHHH
Q psy14345 382 YRDYVDISVAVATPKGLV---VPVIRNVEAMNFADIELTIAALGEKA 425 (431)
Q Consensus 382 ~~~~vnigvAV~~~~GL~---vPvi~~a~~~~l~~ia~~~~~l~~~a 425 (431)
-+...-||+||+-+.|.+ ..+|+. .+..+..+++.++++.-
T Consensus 7 D~G~kriGvAvsd~~~~~A~pl~ti~~---~~~~~~~~~l~~li~e~ 50 (98)
T 1iv0_A 7 DVGEARIGLAVGEEGVPLASGRGYLVR---KTLEEDVEALLDFVRRE 50 (98)
T ss_dssp EESSSEEEEEEECSCCSSCCCEEEEEC---CCHHHHHHHHHHHHHHH
T ss_pred EeCCCEEEEEEEeCCCCeeeeeEEEEc---cCcHHHHHHHHHHHHHc
Confidence 356778999999888866 456762 25667777777777653
No 98
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=21.46 E-value=89 Score=18.34 Aligned_cols=18 Identities=28% Similarity=0.538 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHcC
Q psy14345 411 FADIELTIAALGEKARTG 428 (431)
Q Consensus 411 l~~ia~~~~~l~~~ar~g 428 (431)
|.++.+.++.|..+.|+|
T Consensus 10 ledlqerlrklrkklrsg 27 (27)
T 3twe_A 10 LEDLQERLRKLRKKLRSG 27 (27)
T ss_dssp HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 445555566665555554
No 99
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=20.88 E-value=21 Score=38.32 Aligned_cols=25 Identities=28% Similarity=0.442 Sum_probs=0.0
Q ss_pred eeeeecCCCCeEecCceeEEEecCC
Q psy14345 14 LLLASLEDGATVKAGQQLFKIKPTA 38 (431)
Q Consensus 14 ~l~~~~~eGd~v~VG~~L~~Ie~~~ 38 (431)
++...|++||+|+.|++|+.||.-.
T Consensus 613 v~~~~v~~Gd~V~~g~~l~~iEamK 637 (675)
T 3u9t_A 613 IVRVLVEPGQTVEAGATLVVLEAMK 637 (675)
T ss_dssp -------------------------
T ss_pred EEEEEeCCCCEEcCCCEEEEEEecc
Confidence 3456899999999999999999543
Done!