Query psy14347
Match_columns 316
No_of_seqs 171 out of 1170
Neff 7.5
Searched_HMMs 13730
Date Fri Aug 16 17:34:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14347.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14347hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xhba2 c.68.1.17 (A:95-422) P 94.1 0.57 4.1E-05 40.0 14.4 50 225-274 195-244 (328)
2 d1qg8a_ c.68.1.1 (A:) Spore co 67.4 6.3 0.00046 31.4 7.0 33 127-160 79-111 (255)
3 d1omza_ c.68.1.15 (A:) Alpha-1 61.7 5.6 0.00041 30.5 5.5 33 129-162 74-106 (265)
4 d2bo4a1 c.68.1.18 (A:2-382) Ma 41.9 14 0.001 32.3 5.1 118 126-272 81-207 (381)
5 d1fo8a_ c.68.1.10 (A:) N-acety 40.7 49 0.0036 28.2 8.5 38 122-160 81-121 (343)
6 d2hy5a1 c.114.1.1 (A:1-130) Su 19.1 27 0.002 25.1 2.3 41 46-88 2-43 (130)
7 d1sctb_ a.1.1.2 (B:) Hemoglobi 12.9 40 0.0029 24.4 1.8 17 56-72 11-27 (150)
8 d1spgb_ a.1.1.2 (B:) Hemoglobi 12.3 42 0.0031 24.5 1.8 14 58-71 5-18 (147)
9 d1wmub_ a.1.1.2 (B:) Hemoglobi 11.3 48 0.0035 24.0 1.8 14 58-71 5-18 (146)
10 d1a6ma_ a.1.1.2 (A:) Myoglobin 10.8 51 0.0037 23.9 1.8 15 58-72 4-18 (151)
No 1
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.09 E-value=0.57 Score=39.99 Aligned_cols=50 Identities=6% Similarity=0.040 Sum_probs=34.9
Q ss_pred cccccceEEecHHHHHHHHHHhccCCCCCCCchHHHHhhHHcCCceeecC
Q psy14347 225 PYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGILAKKTNTEPFHCG 274 (316)
Q Consensus 225 ~y~~G~~yvlS~~~~~~l~~~s~~~~~~~~eDv~~Gi~~~k~gi~~~~~~ 274 (316)
+++.|+++++++++...+-.-.........||+-+++-+.+.|......|
T Consensus 195 ~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p 244 (328)
T d1xhba2 195 PTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVT 244 (328)
T ss_dssp SBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEE
T ss_pred ceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeC
Confidence 46789999999999998632111222234799999888888887665444
No 2
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=67.39 E-value=6.3 Score=31.41 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=26.0
Q ss_pred HHHHHHHHCCCccEEEEeCCceEEeHHHHHHHHh
Q psy14347 127 GFKWAANYCKHSKFYFFADDDFYVSTRNVLRFLR 160 (316)
Q Consensus 127 ~l~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~ 160 (316)
++..+.+.+ +.+|++.+|+|.++.++.|...+.
T Consensus 79 a~N~gi~~a-~g~~i~~lD~Dd~~~p~~l~~~~~ 111 (255)
T d1qg8a_ 79 LINQAIEMA-EGEYITYATDDNIYMPDRLLKMVR 111 (255)
T ss_dssp HHHHHHHHC-CCSEEEEEETTEEECTTHHHHHHH
T ss_pred ccccccccc-ccccccccccccccccchHHHHHH
Confidence 566777777 789999999999999876665544
No 3
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.65 E-value=5.6 Score=30.52 Aligned_cols=33 Identities=12% Similarity=0.063 Sum_probs=25.5
Q ss_pred HHHHHHCCCccEEEEeCCceEEeHHHHHHHHhcC
Q psy14347 129 KWAANYCKHSKFYFFADDDFYVSTRNVLRFLRNP 162 (316)
Q Consensus 129 ~w~~~~c~~~~fvlk~DDD~~Vn~~~L~~~L~~~ 162 (316)
..+.+.+ ..+||+.+|||.++..+.|...+...
T Consensus 74 n~~~~~a-~ge~i~~lD~D~~~~~~~l~~l~~~~ 106 (265)
T d1omza_ 74 LQVFPEV-ETNAVLMVDDDTLISAQDLVFAFSIW 106 (265)
T ss_dssp GSCCTTC-CSSEEEEECTTEEECHHHHHHHHHHH
T ss_pred hhhHHhC-CcCEEEEeCcccCCCHHHHHHHHHHH
Confidence 3344444 67999999999999999888877653
No 4
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=41.92 E-value=14 Score=32.32 Aligned_cols=118 Identities=11% Similarity=0.111 Sum_probs=65.1
Q ss_pred HHHHHHHHHCCCccEEEEeCCce-EEeHHHHHHHHhcCCCCCcccccchhhhhccccccccCCCCCcceEEEEeec----
Q psy14347 126 MGFKWAANYCKHSKFYFFADDDF-YVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMDYELPSDVKLFSGFVFV---- 200 (316)
Q Consensus 126 ~~l~w~~~~c~~~~fvlk~DDD~-~Vn~~~L~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ly~G~~~~---- 200 (316)
.++.+..+.. ..+.++.+|.|. =..++-+..++.... ..-.+..|...+
T Consensus 81 ~A~~~g~~~a-~gd~lvflDADl~~~~pe~i~~L~~~i~-------------------------~g~d~V~g~y~R~~~~ 134 (381)
T d2bo4a1 81 TALRYFLEET-QWERIHFYDADITSFGPDWITKAEEAAD-------------------------FGYGLVRHYFPRASTD 134 (381)
T ss_dssp HHHHHHHHHC-CCSEEEECCTTCSSCCHHHHHHHHHHHH-------------------------TTCSEEEEECCCCTTS
T ss_pred HHHHHHHHhC-CCCEEEEEcCCcCcCCHHHHHHHHHHHh-------------------------hhcCeEEEeeccccCC
Confidence 4666766765 799999999997 455555555444311 122344453321
Q ss_pred CcCccCCCCCccccccCCCCC--CcccccccceEEecHHHHHHHHHHhc--cCCCCCCCchHHHHhhHHcCCceee
Q psy14347 201 SSPHRHYTSKWYISLQEYPYH--LWPPYVTAGSYVVSREVLLDFYFASH--FTKHFRFDDIYLGILAKKTNTEPFH 272 (316)
Q Consensus 201 ~~p~r~~~~Kw~v~~~~y~~~--~yP~y~~G~~yvlS~~~~~~l~~~s~--~~~~~~~eDv~~Gi~~~k~gi~~~~ 272 (316)
+...|....+|. ...|+.. .-.....||.+++++++++.|+.... ...-+.+ |+++=..+.++|++...
T Consensus 135 grvt~~l~~pll--~~l~~~~~~~~i~dPl~G~~a~~R~~~~~L~~~~~v~~~~~~G~-Di~lt~~A~~~G~rI~E 207 (381)
T d2bo4a1 135 AMITWMITRTGF--ALLWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGI-DTLYTFVTVQQGVSIYE 207 (381)
T ss_dssp CHHHHHTHHHHH--HHHCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTH-HHHHHHHHHHTTCCEEE
T ss_pred CceehHhhHHHH--HHHhhhhcccccccCCcccceeeHHHHHHhhhhccccccCCccc-chHHHHHHHHcCCeEEe
Confidence 111111111121 0112211 01123468999999999999976543 2233444 78877778888877654
No 5
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=40.72 E-value=49 Score=28.21 Aligned_cols=38 Identities=16% Similarity=0.283 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHH-C--CCccEEEEeCCceEEeHHHHHHHHh
Q psy14347 122 IKTMMGFKWAANY-C--KHSKFYFFADDDFYVSTRNVLRFLR 160 (316)
Q Consensus 122 ~K~~~~l~w~~~~-c--~~~~fvlk~DDD~~Vn~~~L~~~L~ 160 (316)
++.-..++|+.+. + .+++.++...||..+.++-+ .+..
T Consensus 81 ~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf-~y~~ 121 (343)
T d1fo8a_ 81 YKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFF-EYFQ 121 (343)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHH-HHHH
T ss_pred hHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHH-HHHH
Confidence 3444455565543 2 24689999999999988744 4443
No 6
>d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]}
Probab=19.14 E-value=27 Score=25.14 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=25.9
Q ss_pred eEEEEEEcCCC-CHHHHHHHHHHhcCCcCCCCcCEEEEEEecCC
Q psy14347 46 RVVYIVKSALR-HFERRLAIRQSWGYEKRFSDVPIVTVFILGYD 88 (316)
Q Consensus 46 ~lli~V~S~~~-~~~rR~~IR~TW~~~~~~~~~~v~~vFvlG~~ 88 (316)
+++|+|.++|. +..-+.++| +++...-.|..+..+|+.|..
T Consensus 2 k~~i~v~~~P~~~~~a~~al~--fA~aal~~gh~V~~vFf~~dG 43 (130)
T d2hy5a1 2 KFALQINEGPYQHQASDSAYQ--FAKAALEKGHEIFRVFFYHDG 43 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHH--HHHHHHHTTCEEEEEEECGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHH--HHHHHHHCCCeEEEEEEecch
Confidence 57888899884 455666776 333222246667668888763
No 7
>d1sctb_ a.1.1.2 (B:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]}
Probab=12.90 E-value=40 Score=24.41 Aligned_cols=17 Identities=24% Similarity=0.513 Sum_probs=14.1
Q ss_pred CCHHHHHHHHHHhcCCc
Q psy14347 56 RHFERRLAIRQSWGYEK 72 (316)
Q Consensus 56 ~~~~rR~~IR~TW~~~~ 72 (316)
.+.+.+.+||+||....
T Consensus 11 ~~a~qk~li~~SW~~v~ 27 (150)
T d1sctb_ 11 SNADQKDLLRMSWGVLS 27 (150)
T ss_dssp HCHHHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 36789999999998753
No 8
>d1spgb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Fish (Leiostomus xanthurus) [TaxId: 59837]}
Probab=12.29 E-value=42 Score=24.48 Aligned_cols=14 Identities=36% Similarity=0.529 Sum_probs=11.7
Q ss_pred HHHHHHHHHHhcCC
Q psy14347 58 FERRLAIRQSWGYE 71 (316)
Q Consensus 58 ~~rR~~IR~TW~~~ 71 (316)
.+.|.+||+||+..
T Consensus 5 ~~ek~lI~~sW~~v 18 (147)
T d1spgb_ 5 DAERAAIKALWGKI 18 (147)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcC
Confidence 46889999999864
No 9
>d1wmub_ a.1.1.2 (B:) Hemoglobin, beta-chain {Aldabra giant tortoise (Geochelone gigantea) [TaxId: 167804]}
Probab=11.32 E-value=48 Score=24.04 Aligned_cols=14 Identities=21% Similarity=0.304 Sum_probs=11.6
Q ss_pred HHHHHHHHHHhcCC
Q psy14347 58 FERRLAIRQSWGYE 71 (316)
Q Consensus 58 ~~rR~~IR~TW~~~ 71 (316)
.+.+++||+||+..
T Consensus 5 ~~ek~~I~~sW~~v 18 (146)
T d1wmub_ 5 SEEKQYITSLWAKV 18 (146)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcC
Confidence 46789999999864
No 10
>d1a6ma_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]}
Probab=10.82 E-value=51 Score=23.87 Aligned_cols=15 Identities=7% Similarity=0.098 Sum_probs=12.3
Q ss_pred HHHHHHHHHHhcCCc
Q psy14347 58 FERRLAIRQSWGYEK 72 (316)
Q Consensus 58 ~~rR~~IR~TW~~~~ 72 (316)
...|++||+||+...
T Consensus 4 ~~e~~lI~~sW~~v~ 18 (151)
T d1a6ma_ 4 EGEWQLVLHVWAKVE 18 (151)
T ss_dssp HHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHH
Confidence 467999999999753
Done!