RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14347
         (316 letters)



>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga
           maritima [TaxId: 2336]}
          Length = 149

 Score = 28.1 bits (62), Expect = 0.97
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 90  DNEGLQIEIAEESERYNDIVQA--KFIDSYFNNTIKTMMGFK 129
           +  G +  IA     YN+ V+     I  +       M GF+
Sbjct: 99  ELAGTENRIAVARRDYNEAVKKYNTAIKKFPGVIFAKMFGFE 140


>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}
          Length = 172

 Score = 27.0 bits (59), Expect = 2.4
 Identities = 9/45 (20%), Positives = 16/45 (35%)

Query: 140 FYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMD 184
           F   A  D  +    + R L        Y    +ET +   +++D
Sbjct: 13  FAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLD 57


>d1tbrr2 g.68.1.1 (R:52-103) Blood-sucking insect-derived tryptase
          inhibitor {Bug (Rhodnius prolixus), rhodniin [TaxId:
          13249]}
          Length = 52

 Score = 24.1 bits (52), Expect = 4.9
 Identities = 5/41 (12%), Positives = 14/41 (34%), Gaps = 7/41 (17%)

Query: 16 CSTRPINNYN-------YPFISKCEQKCAAYNEKEQIRVVY 49
          C     + Y          + + C  +CA+ +    + + +
Sbjct: 6  CQECDGDEYKPVCGSDDITYDNNCRLECASISSSPGVELKH 46


>d1m4za_ b.34.12.1 (A:) Origin-recognition complex protein 120kDa
           subunit, Orc1p {Baker's yeast (Saccharomyces cerevisiae)
           [TaxId: 4932]}
          Length = 217

 Score = 26.1 bits (57), Expect = 5.1
 Identities = 8/53 (15%), Positives = 15/53 (28%), Gaps = 1/53 (1%)

Query: 135 CKHSKFYFFADDDFYVSTRNVLRFLRNPLQY-PQYLELPIETIQSKSNIMDYE 186
             +           Y +        +N L    +  EL +      +N+MD  
Sbjct: 107 QFNPDANILNRPLNYYNKLFSETANKNELYLTAELAELQLFNFIRVANVMDGS 159


>d2erwa1 g.68.1.1 (A:4-56) Blood-sucking insect-derived tryptase
          inhibitor {Triatoma infestans [TaxId: 30076]}
          Length = 53

 Score = 24.1 bits (52), Expect = 5.5
 Identities = 7/34 (20%), Positives = 16/34 (47%), Gaps = 3/34 (8%)

Query: 28 FISKCEQKCAAYNEKEQIRVVYI---VKSALRHF 58
          + + C   CAA  +   +++V+     +S +  F
Sbjct: 20 YGNPCMLNCAAQTKVPGLKLVHEGRCQRSNVEQF 53


>d2pu9a1 g.36.1.1 (A:8-115) Ferredoxin thioredoxin reductase (FTR),
           catalytic beta chain {Synechocystis sp. [TaxId: 1143]}
          Length = 108

 Score = 25.2 bits (55), Expect = 5.7
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 129 KWAANYCKHSKFYFFADDDFYVSTRNVLRFL-RNPLQY 165
            +A  Y K +  YF +D      T  V+  L R+  + 
Sbjct: 9   NFAEQYAKRTDTYFCSDLSV---TAVVIEGLARHKEEL 43


>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 240

 Score = 25.9 bits (55), Expect = 5.8
 Identities = 9/97 (9%), Positives = 24/97 (24%)

Query: 202 SPHRHYTSKWYISLQEYPYHLWPPYVTAGSYVVSREVLLDFYFASHFTKHFRFDDIYLGI 261
           + +      +          +          V + +   ++    +    F  +    G 
Sbjct: 120 TFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGH 179

Query: 262 LAKKTNTEPFHCGEFYFYKKDYSLHNYQYVIASHGYG 298
            + K +      G  +  +   +       I S G G
Sbjct: 180 PSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG 216


>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 165

 Score = 25.7 bits (56), Expect = 6.2
 Identities = 10/45 (22%), Positives = 15/45 (33%)

Query: 140 FYFFADDDFYVSTRNVLRFLRNPLQYPQYLELPIETIQSKSNIMD 184
           F   A  D  V    + R L        Y    +ET +    ++D
Sbjct: 6   FSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLD 50


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.139    0.441 

Gapped
Lambda     K      H
   0.267   0.0387    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,314,842
Number of extensions: 64550
Number of successful extensions: 177
Number of sequences better than 10.0: 1
Number of HSP's gapped: 177
Number of HSP's successfully gapped: 14
Length of query: 316
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 231
Effective length of database: 1,240,546
Effective search space: 286566126
Effective search space used: 286566126
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.1 bits)