Query psy14349
Match_columns 91
No_of_seqs 175 out of 1449
Neff 9.7
Searched_HMMs 46136
Date Fri Aug 16 17:36:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14349.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14349hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0752|consensus 99.9 1.2E-25 2.5E-30 144.7 6.1 89 3-91 219-307 (320)
2 PF00153 Mito_carr: Mitochondr 99.9 9.4E-25 2E-29 119.6 7.3 84 5-91 2-85 (95)
3 KOG0752|consensus 99.9 2.3E-25 4.9E-30 143.4 5.0 83 4-91 123-205 (320)
4 PTZ00169 ADP/ATP transporter o 99.9 5.3E-24 1.1E-28 137.1 5.6 91 1-91 1-94 (300)
5 KOG0764|consensus 99.9 9.8E-24 2.1E-28 132.4 5.3 85 6-91 4-88 (299)
6 PTZ00169 ADP/ATP transporter o 99.9 2E-22 4.3E-27 129.8 8.1 83 7-91 113-195 (300)
7 KOG0753|consensus 99.9 4.6E-23 1E-27 130.1 2.5 89 3-91 120-209 (317)
8 PTZ00168 mitochondrial carrier 99.9 6.7E-22 1.5E-26 125.3 7.7 76 5-91 177-252 (259)
9 KOG0768|consensus 99.9 3.4E-22 7.4E-27 127.6 6.0 84 3-91 223-306 (323)
10 KOG0762|consensus 99.9 2.4E-22 5.3E-27 124.4 5.1 88 1-91 98-185 (311)
11 KOG0764|consensus 99.9 3.9E-22 8.4E-27 125.3 5.9 83 4-91 203-285 (299)
12 KOG0754|consensus 99.9 2.5E-23 5.3E-28 128.9 0.2 88 4-91 4-91 (294)
13 KOG0758|consensus 99.9 9.7E-22 2.1E-26 124.3 6.4 84 3-91 205-288 (297)
14 KOG0760|consensus 99.8 5.2E-22 1.1E-26 124.2 3.4 88 4-91 199-288 (302)
15 KOG0751|consensus 99.8 3.2E-22 6.9E-27 133.7 1.8 87 2-91 533-619 (694)
16 PTZ00168 mitochondrial carrier 99.8 4.8E-21 1E-25 121.4 5.9 76 7-91 84-160 (259)
17 KOG0759|consensus 99.8 1.8E-20 3.8E-25 117.8 7.3 82 4-91 194-275 (286)
18 KOG0753|consensus 99.8 2.8E-21 6.1E-26 122.1 3.8 84 5-91 223-306 (317)
19 KOG0757|consensus 99.8 1.6E-21 3.5E-26 122.4 2.4 86 2-91 122-207 (319)
20 KOG0757|consensus 99.8 1E-20 2.2E-25 118.8 5.9 82 3-91 229-310 (319)
21 KOG0756|consensus 99.8 1.2E-21 2.6E-26 124.0 0.6 84 3-91 205-288 (299)
22 KOG0762|consensus 99.8 1.4E-20 3.1E-25 116.6 5.0 82 3-91 197-278 (311)
23 KOG0760|consensus 99.8 7.1E-21 1.5E-25 119.1 3.6 80 5-91 109-188 (302)
24 KOG0768|consensus 99.8 6.1E-20 1.3E-24 117.4 6.4 80 3-91 132-211 (323)
25 KOG0758|consensus 99.8 5.7E-21 1.2E-25 120.9 1.4 81 5-91 11-91 (297)
26 KOG0750|consensus 99.8 2.4E-19 5.1E-24 111.9 5.4 83 4-90 208-290 (304)
27 KOG0759|consensus 99.8 3.2E-19 7E-24 112.1 5.9 89 3-91 92-180 (286)
28 KOG0769|consensus 99.8 5E-19 1.1E-23 111.0 5.6 82 7-90 3-84 (308)
29 KOG0766|consensus 99.8 3.5E-19 7.6E-24 109.4 2.3 77 8-91 214-290 (297)
30 KOG0751|consensus 99.7 4.8E-19 1E-23 118.7 2.1 82 9-90 348-430 (694)
31 KOG0761|consensus 99.7 4.6E-19 9.9E-24 113.5 0.5 86 5-91 260-345 (361)
32 KOG0765|consensus 99.7 1.7E-18 3.7E-23 109.4 2.7 79 6-91 245-323 (333)
33 KOG0770|consensus 99.7 6.3E-18 1.4E-22 106.2 4.3 86 6-91 126-214 (353)
34 KOG0754|consensus 99.7 1.5E-18 3.3E-23 107.8 1.3 86 4-91 199-284 (294)
35 KOG0770|consensus 99.7 4.7E-19 1E-23 111.2 -1.7 84 3-91 28-112 (353)
36 KOG0763|consensus 99.7 1.7E-17 3.6E-22 102.0 3.9 89 3-91 108-198 (301)
37 KOG0036|consensus 99.7 1.3E-18 2.8E-23 114.3 -1.3 81 6-91 186-266 (463)
38 KOG0761|consensus 99.7 1.4E-17 3.1E-22 106.7 2.1 83 9-91 158-242 (361)
39 KOG0036|consensus 99.7 1.5E-17 3.3E-22 109.3 1.2 83 3-91 278-360 (463)
40 KOG0755|consensus 99.7 4.4E-18 9.5E-23 105.7 -1.3 86 6-91 21-108 (320)
41 KOG0767|consensus 99.7 5.9E-17 1.3E-21 102.0 3.0 79 6-91 134-212 (333)
42 KOG0769|consensus 99.6 6.9E-16 1.5E-20 97.0 7.3 89 3-91 200-292 (308)
43 KOG0766|consensus 99.6 1.6E-16 3.5E-21 97.8 3.0 75 6-89 13-87 (297)
44 KOG0749|consensus 99.6 9.5E-16 2.1E-20 96.2 5.7 82 4-90 210-291 (298)
45 KOG0749|consensus 99.6 1.1E-16 2.3E-21 100.4 1.4 86 5-91 10-95 (298)
46 KOG0763|consensus 99.6 6.4E-17 1.4E-21 99.5 -0.2 80 3-91 212-291 (301)
47 KOG0765|consensus 99.6 5.1E-16 1.1E-20 98.3 3.7 83 8-90 127-222 (333)
48 KOG0750|consensus 99.6 4.3E-16 9.4E-21 97.5 0.0 86 2-90 107-192 (304)
49 KOG0755|consensus 99.5 5.1E-15 1.1E-19 92.2 2.0 82 5-91 226-307 (320)
50 KOG0767|consensus 99.5 2.9E-16 6.3E-21 98.9 -4.4 72 13-91 44-115 (333)
51 KOG0756|consensus 99.4 9.1E-15 2E-19 93.0 -1.7 87 4-91 104-191 (299)
52 KOG1519|consensus 99.3 7.5E-12 1.6E-16 76.5 6.1 79 7-91 211-291 (297)
53 KOG2954|consensus 99.2 8.9E-11 1.9E-15 76.2 6.8 77 9-85 278-365 (427)
54 KOG2745|consensus 98.9 7.2E-10 1.6E-14 70.4 2.7 65 14-81 143-207 (321)
55 KOG1519|consensus 98.2 6.7E-06 1.4E-10 50.7 6.6 74 7-91 30-103 (297)
56 KOG2745|consensus 98.2 1.2E-05 2.5E-10 51.6 7.3 72 13-84 22-102 (321)
57 KOG2954|consensus 95.0 0.011 2.3E-07 39.4 1.0 58 19-77 78-135 (427)
58 PF12732 YtxH: YtxH-like prote 84.6 1.5 3.3E-05 22.6 2.8 28 8-35 2-29 (74)
59 PHA01749 coat protein 78.8 9.3 0.0002 21.4 5.0 52 22-80 32-87 (134)
60 PF00473 CRF: Corticotropin-re 69.5 4.7 0.0001 18.5 1.6 17 23-39 5-21 (39)
61 PRK06926 flagellar motor prote 66.6 11 0.00024 24.7 3.5 49 20-68 50-101 (271)
62 PRK09110 flagellar motor prote 65.1 7.4 0.00016 25.6 2.5 50 19-68 42-97 (283)
63 PRK06743 flagellar motor prote 65.1 14 0.0003 24.0 3.7 48 21-68 43-93 (254)
64 PRK12482 flagellar motor prote 59.3 22 0.00047 23.6 3.9 48 21-68 44-97 (287)
65 COG4980 GvpP Gas vesicle prote 58.1 23 0.0005 20.2 3.4 30 5-34 5-34 (115)
66 COG4297 Uncharacterized protei 58.0 6.5 0.00014 23.3 1.2 20 55-74 36-55 (163)
67 smart00039 CRF corticotropin-r 55.5 11 0.00023 17.4 1.4 17 23-39 6-22 (40)
68 COG3046 Uncharacterized protei 54.5 19 0.0004 25.4 3.0 25 16-40 264-288 (505)
69 PRK01622 OxaA-like protein pre 53.1 45 0.00097 21.6 4.5 27 52-78 119-145 (256)
70 PF02096 60KD_IMP: 60Kd inner 51.3 30 0.00065 21.1 3.5 61 17-78 10-78 (198)
71 PF02466 Tim17: Tim17/Tim22/Ti 48.0 16 0.00035 20.6 1.8 21 3-23 80-100 (128)
72 PF13940 Ldr_toxin: Toxin Ldr, 47.6 27 0.00059 15.4 2.6 24 6-29 9-32 (35)
73 TIGR03818 MotA1 flagellar moto 46.6 24 0.00052 23.3 2.6 50 19-68 42-97 (282)
74 PRK08990 flagellar motor prote 46.0 59 0.0013 21.1 4.2 49 21-69 45-96 (254)
75 PF02830 V4R: V4R domain; Int 44.5 39 0.00084 16.6 2.7 26 4-29 17-42 (62)
76 PRK09109 motC flagellar motor 43.9 30 0.00066 22.2 2.7 18 19-36 44-61 (246)
77 COG1963 Uncharacterized protei 43.7 37 0.0008 20.3 2.8 29 10-38 12-40 (153)
78 KOG1431|consensus 43.2 7 0.00015 25.4 -0.2 29 11-40 61-89 (315)
79 COG1993 PII-like signaling pro 42.9 21 0.00045 20.2 1.6 24 50-73 22-47 (109)
80 KOG1484|consensus 42.5 72 0.0016 21.9 4.3 42 21-68 251-294 (354)
81 PF12594 DUF3764: Protein of u 41.6 14 0.00029 20.0 0.7 18 57-74 27-44 (86)
82 KOG0682|consensus 39.2 66 0.0014 23.2 3.9 32 5-40 309-340 (500)
83 COG4075 Uncharacterized conser 38.7 15 0.00033 20.4 0.7 20 56-75 19-42 (110)
84 PTZ00236 mitochondrial import 37.2 95 0.0021 18.9 3.9 25 4-28 86-110 (164)
85 PF08672 APC2: Anaphase promot 36.4 60 0.0013 16.1 3.0 22 17-38 3-24 (60)
86 COG3472 Uncharacterized conser 35.7 18 0.00039 24.5 0.7 29 46-74 178-206 (342)
87 PF06946 Phage_holin_5: Phage 35.4 72 0.0016 17.5 2.9 24 3-26 33-56 (93)
88 PRK08456 flagellar motor prote 35.4 77 0.0017 20.5 3.6 16 20-35 45-60 (257)
89 PF10126 Nit_Regul_Hom: Unchar 34.3 19 0.00042 20.3 0.6 20 58-77 21-44 (110)
90 PF02411 MerT: MerT mercuric t 34.2 69 0.0015 18.2 2.9 31 1-31 1-32 (116)
91 KOG1746|consensus 33.6 94 0.002 17.6 3.7 30 7-41 54-83 (115)
92 PF06043 Reo_P9: Reovirus P9-l 33.1 68 0.0015 21.5 3.0 36 19-65 237-272 (333)
93 PF08887 GAD-like: GAD-like do 33.0 37 0.00079 19.1 1.6 26 48-73 27-53 (109)
94 PF03419 Peptidase_U4: Sporula 31.4 1.5E+02 0.0033 19.4 5.0 26 3-28 29-54 (293)
95 PF00440 TetR_N: Bacterial reg 30.4 56 0.0012 14.8 1.9 15 53-67 2-16 (47)
96 PF08300 HCV_NS5a_1a: Hepatiti 29.5 18 0.0004 18.2 0.0 11 62-72 7-17 (62)
97 TIGR03592 yidC_oxa1_cterm memb 29.0 1.2E+02 0.0027 18.3 3.6 60 17-77 9-76 (181)
98 COG5499 Predicted transcriptio 28.3 98 0.0021 17.7 2.8 15 26-40 60-74 (120)
99 PF10399 UCR_Fe-S_N: Ubiquitin 28.1 73 0.0016 14.6 2.6 18 11-28 17-34 (41)
100 PF08195 TRI9: TRI9 protein; 27.9 71 0.0015 14.4 2.2 22 2-23 14-35 (43)
101 PF14514 TetR_C_9: Transcripti 27.8 1.3E+02 0.0028 17.3 3.7 38 51-88 51-88 (129)
102 COG3788 Uncharacterized relati 27.4 1.3E+02 0.0029 17.4 4.7 19 22-40 17-35 (131)
103 PF06837 Fijivirus_P9-2: Fijiv 26.9 45 0.00097 20.9 1.4 14 24-37 14-27 (214)
104 TIGR00980 3a0801so1tim17 mitoc 26.8 1.4E+02 0.0031 18.2 3.5 21 3-23 83-103 (170)
105 PF10295 DUF2406: Uncharacteri 25.1 37 0.00081 17.6 0.7 7 27-33 56-62 (69)
106 PF12156 ATPase-cat_bd: Putati 24.9 52 0.0011 17.6 1.3 20 52-71 31-50 (88)
107 smart00263 LYZ1 Alpha-lactalbu 24.8 62 0.0013 18.8 1.7 16 52-67 91-106 (127)
108 PF01988 VIT1: VIT family; In 24.2 1.9E+02 0.0041 18.0 4.0 19 7-25 33-51 (213)
109 PF02873 MurB_C: UDP-N-acetyle 24.1 83 0.0018 17.5 2.0 43 29-71 10-55 (105)
110 COG1719 Predicted hydrocarbon 23.2 7.6 0.00016 23.2 -2.4 35 5-39 111-145 (158)
111 PF05415 Peptidase_C36: Beet n 23.2 1E+02 0.0022 16.9 2.2 19 21-39 15-33 (104)
112 COG0650 HyfC Formate hydrogenl 22.9 2.5E+02 0.0055 19.0 5.2 38 21-63 21-58 (309)
113 PF01034 Syndecan: Syndecan do 22.1 30 0.00064 17.7 0.0 20 7-26 10-29 (64)
114 PF14074 DUF4257: Protein of u 22.1 1.4E+02 0.003 16.1 2.5 23 5-27 36-59 (82)
115 PF08525 OapA_N: Opacity-assoc 21.9 85 0.0019 13.2 2.3 25 4-28 5-29 (30)
116 PF13467 RHH_4: Ribbon-helix-h 20.2 1.1E+02 0.0024 15.6 1.9 17 50-66 20-36 (67)
No 1
>KOG0752|consensus
Probab=99.92 E-value=1.2e-25 Score=144.69 Aligned_cols=89 Identities=24% Similarity=0.454 Sum_probs=80.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
++.+.+..+++|++||+++.++++|+|+||.|||+.+........++.++++|+++|+++||++|||||+.|++++.+|.
T Consensus 219 ~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~ 298 (320)
T KOG0752|consen 219 KELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPS 298 (320)
T ss_pred chhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhccc
Confidence 35677889999999999999999999999999999986533344567899999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
.++.|.+||
T Consensus 299 ~ai~F~~Ye 307 (320)
T KOG0752|consen 299 VAISFTTYE 307 (320)
T ss_pred ceeeeehHH
Confidence 999999997
No 2
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ]. Such proteins include: ADP, ATP carrier protein (ADP/ATP translocase); 2-oxoglutarate/malate carrier protein; phosphate carrier protein; tricarboxylate transport protein (or citrate transport protein); Graves disease carrier protein; yeast mitochondrial proteins MRS3 and MRS4; yeast mitochondrial FAD carrier protein; and many others. Structurally, these proteins can consist of up to three tandem repeats of a domain of approximately 100 residues, each domain containing two transmembrane regions.; PDB: 2LCK_A 2C3E_A 1OKC_A.
Probab=99.92 E-value=9.4e-25 Score=119.64 Aligned_cols=84 Identities=27% Similarity=0.581 Sum_probs=74.8
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhh
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~ 84 (91)
.+++..+++|++||+++.++++|+|++|+|+|.... .....+.++++++++++++||+++||||+.+++++.++.++
T Consensus 2 ~~~~~~~~~g~~ag~~~~~~~~Pld~ik~~~q~~~~---~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~ 78 (95)
T PF00153_consen 2 LSFFANFIAGALAGAISTLVTYPLDTIKTRMQSESP---SGKQPYQGVWQCLRKIYKEEGIRGLYRGFGPSLLRSIPYTA 78 (95)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCSC---CCCSS-SSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhHHHHHhHhhccccc---ccccccccccccccccchhhhhccccCChHHHHHHHHHHHH
Confidence 567889999999999999999999999999992211 13467899999999999999999999999999999999999
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
++|++||
T Consensus 79 ~~~~~~~ 85 (95)
T PF00153_consen 79 IYFGLYE 85 (95)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
No 3
>KOG0752|consensus
Probab=99.92 E-value=2.3e-25 Score=143.36 Aligned_cols=83 Identities=24% Similarity=0.448 Sum_probs=78.5
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
..+++.+++||++||+++++++||+|++|+|+-+|+.. ..|+++.+++++|+++||++|||||+.|++++..|+.
T Consensus 123 ~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~-----~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pya 197 (320)
T KOG0752|consen 123 SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGEL-----KVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYA 197 (320)
T ss_pred ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeeccc-----ccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhh
Confidence 56789999999999999999999999999999998764 2699999999999999999999999999999999999
Q ss_pred hhhhhccC
Q psy14349 84 ALNFEYWN 91 (91)
Q Consensus 84 ~i~~~~ye 91 (91)
++.|++||
T Consensus 198 g~~F~~Yd 205 (320)
T KOG0752|consen 198 GINFFAYD 205 (320)
T ss_pred hhHHHHHH
Confidence 99999997
No 4
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional
Probab=99.90 E-value=5.3e-24 Score=137.11 Aligned_cols=91 Identities=57% Similarity=0.998 Sum_probs=81.2
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCcc---ccccCCCCHHHHHHHHHHhhchhhcccccHHHHH
Q psy14349 1 MGGQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKN---IAARRYRGIGDCFVRIHKEQGTLSFWRGNSANIL 77 (91)
Q Consensus 1 ~~~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~---~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~ 77 (91)
||+..+.+..+++|++||+++.++++|+|+||+|+|++..... ....+|.++++++++|+++||++|||||+.++++
T Consensus 1 ~~~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~~~ 80 (300)
T PTZ00169 1 MDKKTNFATDFLMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKVPRYSGIVNCFRRVSKEQGVLSLWRGNTANVI 80 (300)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhcCcHhHheeeeeccccccccccccCcCcCcHHHHHHHHHhccceeEEecCChHHHH
Confidence 6777788899999999999999999999999999999864321 1235789999999999999999999999999999
Q ss_pred HHhhhhhhhhhccC
Q psy14349 78 RYFPAQALNFEYWN 91 (91)
Q Consensus 78 ~~~~~~~i~~~~ye 91 (91)
+.+|.++++|.+||
T Consensus 81 ~~~~~~~~~f~~ye 94 (300)
T PTZ00169 81 RYFPTQAFNFAFKD 94 (300)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999986
No 5
>KOG0764|consensus
Probab=99.89 E-value=9.8e-24 Score=132.45 Aligned_cols=85 Identities=27% Similarity=0.390 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhh
Q psy14349 6 DFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQAL 85 (91)
Q Consensus 6 ~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i 85 (91)
.-|.++++|..+|++++++++|+|++|+|+|++... ....+.|.++.+++++|+|.||++|||||+.|+++...+.+++
T Consensus 4 ~~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~-~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgi 82 (299)
T KOG0764|consen 4 VQWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR-TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGL 82 (299)
T ss_pred cchhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc-cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHH
Confidence 446778999999999999999999999999999332 1245789999999999999999999999999999999999999
Q ss_pred hhhccC
Q psy14349 86 NFEYWN 91 (91)
Q Consensus 86 ~~~~ye 91 (91)
+|.+||
T Consensus 83 YF~~Y~ 88 (299)
T KOG0764|consen 83 YFFFYD 88 (299)
T ss_pred HHHHHH
Confidence 999996
No 6
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional
Probab=99.88 E-value=2e-22 Score=129.82 Aligned_cols=83 Identities=23% Similarity=0.437 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhhh
Q psy14349 7 FVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQALN 86 (91)
Q Consensus 7 ~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i~ 86 (91)
.+.++++|++||+++.++++|+|++|+|+|.+.... ...+|.++++++++|+++||++|||||+.+++++.+|..+++
T Consensus 113 ~~~~~~aG~~ag~~~~~~~~P~d~vk~r~q~~~~~~--~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~ 190 (300)
T PTZ00169 113 FGVNILSGGLAGASSLLIVYPLDFARTRLASDIGKG--GDREFTGLFDCLMKISKQTGFLSLYQGFGVSVQGIIVYRGAY 190 (300)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHhhcccC--ccccCCCHHHHHHHHHHhhchHHhhcccHHHHHHHHHHHHHH
Confidence 457799999999999999999999999999875321 235689999999999999999999999999999999999999
Q ss_pred hhccC
Q psy14349 87 FEYWN 91 (91)
Q Consensus 87 ~~~ye 91 (91)
|.+||
T Consensus 191 f~~ye 195 (300)
T PTZ00169 191 FGLYD 195 (300)
T ss_pred HHHHH
Confidence 99997
No 7
>KOG0753|consensus
Probab=99.87 E-value=4.6e-23 Score=130.12 Aligned_cols=89 Identities=20% Similarity=0.323 Sum_probs=81.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCC-ccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSS-KNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFP 81 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~-~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~ 81 (91)
++++.|.++++|..+|+++..+.+|.|+||+|||+++.. ....+++|+++.+++++|+++||++|||+|..|++.|.+.
T Consensus 120 ~~~~l~~~~l~G~taGaia~~~AnPtDlVKVrmQaeG~~~~~g~~~Ry~g~~~Af~~I~r~eGvrGLWkG~~Pn~qRaal 199 (317)
T KOG0753|consen 120 ESLPLWKSILCGVTAGAIAQALANPTDLVKVRMQAEGRLRLQGEPPRYSGTLNAFRTIYRTEGVRGLWKGVVPNIQRAAL 199 (317)
T ss_pred ccccHHHHHHHHHhhhHHHHHhcCccceEEEEeeehhhhcccCCCCccccHHHHHHHHHHhcCcceeeeccchhHHHHHH
Confidence 568899999999999999999999999999999999876 3335689999999999999999999999999999999999
Q ss_pred hhhhhhhccC
Q psy14349 82 AQALNFEYWN 91 (91)
Q Consensus 82 ~~~i~~~~ye 91 (91)
-+..-..+||
T Consensus 200 vn~~el~tYD 209 (317)
T KOG0753|consen 200 VNCGELVTYD 209 (317)
T ss_pred HhccchhHHH
Confidence 8888877775
No 8
>PTZ00168 mitochondrial carrier protein; Provisional
Probab=99.87 E-value=6.7e-22 Score=125.32 Aligned_cols=76 Identities=20% Similarity=0.291 Sum_probs=69.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhh
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~ 84 (91)
.+....+++|++||++++++++|+|+||+|+|.+. ++..++++++ ++||++|||||+.+++++.+|..+
T Consensus 177 ~~~~~~~~aG~~ag~~a~~~t~P~DvvKtr~q~~~----------~~~~~~~~~i-~~eG~~glyrG~~~r~~r~~~~~~ 245 (259)
T PTZ00168 177 YPSITSAICGGLAGGIAGFLTTPVDVIKSRQIIYG----------KSYIETVTEI-AEEGYLTFYKGCCFRSSYLFFGGL 245 (259)
T ss_pred CchHHHHHHHHHHHHHHHHhCChHHHHHHHHHhcc----------ccHHHHHHHH-HHhCHHHHHccchHHHHHHHhchH
Confidence 34577799999999999999999999999999863 3578999998 999999999999999999999999
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
+.|..||
T Consensus 246 i~~~~~~ 252 (259)
T PTZ00168 246 IFFGSLR 252 (259)
T ss_pred HHhhHhh
Confidence 9999997
No 9
>KOG0768|consensus
Probab=99.86 E-value=3.4e-22 Score=127.58 Aligned_cols=84 Identities=13% Similarity=0.255 Sum_probs=77.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
.++..|...++|++||.++..+|.|+||||||||.+... ..+.++..++++|+++||+.|||+|+.|+++...+.
T Consensus 223 ~e~~~~e~a~~Ga~AG~itA~lTTPlDViKTRiM~~~~~-----~~~~~~~~~i~~I~~eeG~~gl~kG~vPRv~w~s~g 297 (323)
T KOG0768|consen 223 RELEPLEGALCGALAGGITAALTTPLDVIKTRIMLAKHG-----RSCSTLLRVIKSIYREEGFAGLFKGLVPRVFWISLG 297 (323)
T ss_pred cccCCHHHHHHHHHhhhHHhhcCChHHHHHHHHhhcccc-----cchhHHHHHHHHHHHhcchHHHhhcchhHHHHHccc
Confidence 467889999999999999999999999999999999864 345558999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
.+++|+.||
T Consensus 298 Gaif~g~YE 306 (323)
T KOG0768|consen 298 GAIFLGAYE 306 (323)
T ss_pred hHHHHhHHH
Confidence 999999997
No 10
>KOG0762|consensus
Probab=99.86 E-value=2.4e-22 Score=124.36 Aligned_cols=88 Identities=27% Similarity=0.471 Sum_probs=81.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHh
Q psy14349 1 MGGQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYF 80 (91)
Q Consensus 1 ~~~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~ 80 (91)
++++.+...+|++|+.||++-.++..|+|.+|+|+|.|... ...+|++.++|++.|+++||++|+|||+..+++|+.
T Consensus 98 ~~dpdS~~s~fl~G~aaGa~Q~vi~aPmEl~K~rLQlqd~~---~~~t~~Gpi~~~kqilr~eGlrgl~rGltaTvlRda 174 (311)
T KOG0762|consen 98 FDDPDSYTSHFLGGVAAGAAQSVICAPMELIKTRLQLQDQD---SGITFSGPIDCLKQILRTEGLRGLYRGLTATVLRDA 174 (311)
T ss_pred cCCCCcHHHHHHHHHHHhhhhhhhcchHHHHHHHHhhhccc---CCccccCcHHHHHHHHhhhhhhHHhhhHHHHHHhcC
Confidence 45678899999999999999999999999999999999554 346899999999999999999999999999999999
Q ss_pred hhhhhhhhccC
Q psy14349 81 PAQALNFEYWN 91 (91)
Q Consensus 81 ~~~~i~~~~ye 91 (91)
|..++||.+||
T Consensus 175 PafgvYF~tye 185 (311)
T KOG0762|consen 175 PAFGVYFWTYE 185 (311)
T ss_pred CcceeeeeeHH
Confidence 99999999997
No 11
>KOG0764|consensus
Probab=99.86 E-value=3.9e-22 Score=125.32 Aligned_cols=83 Identities=22% Similarity=0.411 Sum_probs=75.4
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
.+......+.++++.+++++++||.+++|+|||.++. ..+|.+++++++++|+.||++|||||+.++++|.+|.+
T Consensus 203 ~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~-----~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~ 277 (299)
T KOG0764|consen 203 HLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSD-----NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAA 277 (299)
T ss_pred chhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhccc-----CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccc
Confidence 3455667777779999999999999999999999964 25789999999999999999999999999999999999
Q ss_pred hhhhhccC
Q psy14349 84 ALNFEYWN 91 (91)
Q Consensus 84 ~i~~~~ye 91 (91)
.|.|.+||
T Consensus 278 ~ITF~vyE 285 (299)
T KOG0764|consen 278 CITFLVYE 285 (299)
T ss_pred eeeeehHH
Confidence 99999997
No 12
>KOG0754|consensus
Probab=99.86 E-value=2.5e-23 Score=128.85 Aligned_cols=88 Identities=27% Similarity=0.398 Sum_probs=81.2
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
..+....++||++||.+..+++||+||||||||.+...+..+...|.++.||+++|+|.||+.+||||+.|-++...|..
T Consensus 4 ~~~~~~Qf~AGg~AG~~Ev~~myPLDVVKTRmQlq~~~~~~~~~~Y~g~~Dc~~Ki~k~EG~s~lykGI~pPIl~EtPKR 83 (294)
T KOG0754|consen 4 PLPAIRQFLAGGSAGFSEVCLMYPLDVVKTRMQLQVTTPFGGEVHYNGVMDCLVKIVKNEGLSSLYKGILPPILMETPKR 83 (294)
T ss_pred ccccceeeecccccchhhheeecchhhheeeeeeecccCCCCccccccHHHHHHHHHHhcchhhhhccCCCHHhhhcchh
Confidence 44566779999999999999999999999999999876666778999999999999999999999999999999999999
Q ss_pred hhhhhccC
Q psy14349 84 ALNFEYWN 91 (91)
Q Consensus 84 ~i~~~~ye 91 (91)
++.|..||
T Consensus 84 a~KF~~~e 91 (294)
T KOG0754|consen 84 ATKFLTNE 91 (294)
T ss_pred hhhhccHH
Confidence 99999886
No 13
>KOG0758|consensus
Probab=99.86 E-value=9.7e-22 Score=124.33 Aligned_cols=84 Identities=26% Similarity=0.346 Sum_probs=76.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
+..+.|...++|++||+..+.+.+|+||+|+|+|.+++. +...++.++.++|++++|+++||||++|.++|..|.
T Consensus 205 ~~~~~~~~~~aGg~aG~a~W~~v~P~DvvKS~iQt~~~~-----~~~~~~~~~~k~i~~~~G~k~~yrG~gp~~~RafPa 279 (297)
T KOG0758|consen 205 SLVPTWKLLLAGGLAGIAFWLAVFPFDVVKSRLQTDPKP-----TYKNSIRSVAKKIYRKEGLKGFYRGFGPTLLRAFPA 279 (297)
T ss_pred CccchHHHHHhhhHHHHhhHhhhccHHHHHHHHhcCCCC-----CccccHHHHHHHHHHhhchhhhhccccHHHhhhccc
Confidence 356889999999999999999999999999999999543 345678889999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
++..|..||
T Consensus 280 NAA~F~~~E 288 (297)
T KOG0758|consen 280 NAATFLGFE 288 (297)
T ss_pred chhhhhHHH
Confidence 999999887
No 14
>KOG0760|consensus
Probab=99.85 E-value=5.2e-22 Score=124.18 Aligned_cols=88 Identities=27% Similarity=0.510 Sum_probs=79.9
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCc--cccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhh
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSK--NIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFP 81 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~--~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~ 81 (91)
...+..+.++|+++|++++.++.|||+|||++|++.... .....+..++.+++|.|++.+|++|||||+.++++-.+|
T Consensus 199 ~y~p~ih~i~GalaGa~Aaa~TTPLDvvKT~Lq~q~s~~~~~~~~~k~~gi~~a~R~Iy~~~G~~gf~rG~~~Rm~~~mP 278 (302)
T KOG0760|consen 199 KYNPLIHIIAGALAGALAAALTTPLDVVKTLLQTQGSSALSILIRRKASGISDAFRTIYQKHGVKGFFRGLKPRMVYNMP 278 (302)
T ss_pred ccCcHHHHHhhhhhHHHHHHhCCcHHHHHHHHHhhcchhhHHHHHHhhccHHHHHHHHHHhcCchhhhhcccceeeecCc
Confidence 356788999999999999999999999999999998753 123467789999999999999999999999999999999
Q ss_pred hhhhhhhccC
Q psy14349 82 AQALNFEYWN 91 (91)
Q Consensus 82 ~~~i~~~~ye 91 (91)
.+++.|..||
T Consensus 279 ataIswS~yE 288 (302)
T KOG0760|consen 279 ATAISWSVYE 288 (302)
T ss_pred hhhhhHHHHH
Confidence 9999999997
No 15
>KOG0751|consensus
Probab=99.84 E-value=3.2e-22 Score=133.73 Aligned_cols=87 Identities=28% Similarity=0.564 Sum_probs=81.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhh
Q psy14349 2 GGQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFP 81 (91)
Q Consensus 2 ~~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~ 81 (91)
++..++|..+.+|++||+-++.++.|.||||||+|+.... ++..|.++++|+|+|++|||+++||+|-.+++.|..|
T Consensus 533 dg~~~p~~LlaagaiAGvPAA~LvTPaDVIKTRLQvaaRa---GqTtYnGv~d~~rkilkEEgp~afwKGtaARV~RSSP 609 (694)
T KOG0751|consen 533 DGRVSPLTLLAAGAIAGVPAASLVTPADVIKTRLQVAARA---GQTTYNGVIDCFRKILKEEGPRAFWKGTAARVFRSSP 609 (694)
T ss_pred cCCcChHHHHHHHHhcCCchhhcCCHHHHHHHHheecccc---CCceechHHHHHHHHHHhhChHhhhcccceeeeccCC
Confidence 4667899999999999999999999999999999998765 6689999999999999999999999999999999999
Q ss_pred hhhhhhhccC
Q psy14349 82 AQALNFEYWN 91 (91)
Q Consensus 82 ~~~i~~~~ye 91 (91)
..++.+..||
T Consensus 610 QFgvTL~tYE 619 (694)
T KOG0751|consen 610 QFGVTLATYE 619 (694)
T ss_pred cchhhHHHHH
Confidence 9999999987
No 16
>PTZ00168 mitochondrial carrier protein; Provisional
Probab=99.84 E-value=4.8e-21 Score=121.41 Aligned_cols=76 Identities=18% Similarity=0.232 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhh-cccccHHHHHHHhhhhhh
Q psy14349 7 FVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLS-FWRGNSANILRYFPAQAL 85 (91)
Q Consensus 7 ~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g-~y~G~~~~~~~~~~~~~i 85 (91)
....+++|++||+++.++++|+|+||+|+|.+. +.+.++++++|+++||++| +|||+.++++|.+|++++
T Consensus 84 ~~~~~~ag~~Ag~~a~~~~~P~dvvKtRlQ~~~---------~~~~~~~~~~i~~~eG~~g~~y~G~~~~l~r~~p~~~~ 154 (259)
T PTZ00168 84 TNLYLISTSIAEITACIVRLPFEIVKQNMQVSG---------NISVLKTIYEITQREGLPSFLGKSYFVMIVREIPFDCI 154 (259)
T ss_pred hHHHHHHHHHHHHhhheeeChHHHHHHHHHhcC---------CCcHHHHHHHHHHccCccccccchHHHHHHHhcChhee
Confidence 346789999999999999999999999999974 2579999999999999998 689999999999999999
Q ss_pred hhhccC
Q psy14349 86 NFEYWN 91 (91)
Q Consensus 86 ~~~~ye 91 (91)
+|.+||
T Consensus 155 ~f~~ye 160 (259)
T PTZ00168 155 QYFLWE 160 (259)
T ss_pred ehhHHH
Confidence 999997
No 17
>KOG0759|consensus
Probab=99.83 E-value=1.8e-20 Score=117.76 Aligned_cols=82 Identities=22% Similarity=0.481 Sum_probs=76.7
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
+.+...+++++.+||.+++.+++|+|++|||+|..... .|++.++|+.++.|+||+.+||||+.|.++|..|.+
T Consensus 194 ~d~~~tH~~aS~~aG~vatv~s~PlDv~KTr~mN~~~~------~y~g~~d~~~k~~k~eG~~~~~kGf~P~~~Rl~PhT 267 (286)
T KOG0759|consen 194 DDGILTHFIASMIAGLVATVISQPLDVLKTRIMNMKPG------EYKGLLDVLVKTVKKEGPLGFFKGFVPALMRLGPHT 267 (286)
T ss_pred CCchHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcc------ccccHHHHHHHHHHHcCcchhhccchHHHHHhcchh
Confidence 45678899999999999999999999999999998764 389999999999999999999999999999999999
Q ss_pred hhhhhccC
Q psy14349 84 ALNFEYWN 91 (91)
Q Consensus 84 ~i~~~~ye 91 (91)
.+.|.+||
T Consensus 268 vl~fv~lE 275 (286)
T KOG0759|consen 268 VLTFVFLE 275 (286)
T ss_pred hhHHHHHH
Confidence 99999886
No 18
>KOG0753|consensus
Probab=99.83 E-value=2.8e-21 Score=122.10 Aligned_cols=84 Identities=20% Similarity=0.347 Sum_probs=78.4
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhh
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~ 84 (91)
++...+++++..||++++++..|.||||+||+.|+.. ....|++..||+.+++++||+.+||||+.|+++|-.|.+.
T Consensus 223 Dn~~~HfvSs~~AGl~aai~s~P~DVVKTRmMNqp~g---~~~~Ykgs~DC~~k~v~~EG~~AlYKGF~Psw~RlGpWnv 299 (317)
T KOG0753|consen 223 DNIPTHFVSSFCAGLAAAILSSPVDVVKTRMMNQPPG---RGGLYKGSLDCLIKTVKNEGFFALYKGFIPSWLRLGPWNV 299 (317)
T ss_pred cchHHHHHHHHHHHHHHHHhcCcHHHHHhhhccCCCC---cCccccchHHHHHHHHHhcChHHHHccccccceecCCeee
Confidence 4677899999999999999999999999999999872 3468999999999999999999999999999999999999
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
++|.+||
T Consensus 300 ifwvtyE 306 (317)
T KOG0753|consen 300 IFWVTYE 306 (317)
T ss_pred eeeeeHH
Confidence 9999997
No 19
>KOG0757|consensus
Probab=99.83 E-value=1.6e-21 Score=122.38 Aligned_cols=86 Identities=21% Similarity=0.348 Sum_probs=78.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhh
Q psy14349 2 GGQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFP 81 (91)
Q Consensus 2 ~~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~ 81 (91)
+++.+...++++++.||+++...++|+-+||||||.+.... ..+|.+.++|+++++++||++|||||+.+++....
T Consensus 122 ~~~~S~~vHm~sAasAgf~tstatNPIWlVKTRlQLd~~~~---g~~~~~~~qc~~~Vy~~EG~rGfYkGltASyaGvs- 197 (319)
T KOG0757|consen 122 NGPESPQVHMMAAASAGFATSTATNPIWLVKTRLQLDQKSR---GSQYMNVWQCIRRVYHTEGFRGFYKGLTASYAGVS- 197 (319)
T ss_pred CCCCcchhHHHHHhhhHHHHhhccCceEEEeehhhhhcccC---CcccccHHHHHHHHHHhhhhhHHhhcccHHhccch-
Confidence 35677888999999999999999999999999999988753 36899999999999999999999999999999764
Q ss_pred hhhhhhhccC
Q psy14349 82 AQALNFEYWN 91 (91)
Q Consensus 82 ~~~i~~~~ye 91 (91)
.+.++|.+||
T Consensus 198 Et~iqf~iYE 207 (319)
T KOG0757|consen 198 ETIIQFVIYE 207 (319)
T ss_pred HhhHHHHHHH
Confidence 8899999997
No 20
>KOG0757|consensus
Probab=99.83 E-value=1e-20 Score=118.79 Aligned_cols=82 Identities=26% Similarity=0.408 Sum_probs=76.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
+..++...+.++++|..+++++.||-||||||++-++. +|++++++++.+++|||..|||||+.+.++|++|+
T Consensus 229 ~~~df~~~m~aa~~aK~~As~iaYPHEVvRTRLReeg~-------KY~gfvqt~~~v~keEG~~~lYrGL~~~L~R~iPN 301 (319)
T KOG0757|consen 229 ESLDFGGFMGAAGLAKFIASIIAYPHEVVRTRLREEGT-------KYTGFVQTLKLVFKEEGYPGLYRGLTTQLLRTVPN 301 (319)
T ss_pred cccCHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhcc-------chhhHHHHHHHHHHhcChHHHHhHHHHHHHHhCCC
Confidence 34677888999999999999999999999999998742 79999999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
++|.|++||
T Consensus 302 taI~~~TYE 310 (319)
T KOG0757|consen 302 TAIMFGTYE 310 (319)
T ss_pred ceeeeehHH
Confidence 999999997
No 21
>KOG0756|consensus
Probab=99.82 E-value=1.2e-21 Score=124.00 Aligned_cols=84 Identities=24% Similarity=0.362 Sum_probs=77.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
++++.+..+++|++||+++...+.|+|+||+|||..... ..+.++.+|..+|+++||+++||||..|++.|.++.
T Consensus 205 ~~l~~~~~~~~gaiaGa~sv~~~~PiDvvktRMqsl~s~-----~~~~~t~~~~~~I~k~eGlkafykG~~PRlgrv~~~ 279 (299)
T KOG0756|consen 205 KPLNPLSSGISGAIAGAASVFGTQPIDVVKTRMQSLKSD-----KEYKQTIDCAYQILKSEGLKAFYKGLVPRLGRVCLS 279 (299)
T ss_pred cccCchhhhhhhhhccccccccCCCcHHHHHHhhhhhcc-----ccccchHHHhHHHHHhhhHHHHhccccccccccccC
Confidence 457899999999999999999999999999999998865 234559999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
.++.|.+||
T Consensus 280 ~~i~f~vyd 288 (299)
T KOG0756|consen 280 VGITFTVYD 288 (299)
T ss_pred ceEEEEEhH
Confidence 999999986
No 22
>KOG0762|consensus
Probab=99.82 E-value=1.4e-20 Score=116.56 Aligned_cols=82 Identities=33% Similarity=0.545 Sum_probs=76.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
++++....++||+.||+++++.+||+|+||+|+|.+.. +|+++.||+++-+++||++.||||+...++|..|.
T Consensus 197 ~~l~v~~lL~AGG~aGm~SWla~Yp~DVVKtrlQad~~-------~Y~g~~dC~~ks~r~eG~r~f~rGL~saliRAFpv 269 (311)
T KOG0762|consen 197 GQLNVRTLLVAGGTAGMASWLACYPLDVVKTRLQADHL-------AYEGIADCFRKSYRQEGYRVFFRGLNSALIRAFPV 269 (311)
T ss_pred cccchhhhhhhcchhhHHHHHHhccHHHHHHHHhcccc-------chhhHHHHHHHHHHhcCceeehhhhhHHHHHhccc
Confidence 34667788999999999999999999999999999875 59999999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
++..|..+|
T Consensus 270 NaA~F~tve 278 (311)
T KOG0762|consen 270 NAATFATVE 278 (311)
T ss_pred cceeeeehH
Confidence 999998775
No 23
>KOG0760|consensus
Probab=99.82 E-value=7.1e-21 Score=119.14 Aligned_cols=80 Identities=23% Similarity=0.435 Sum_probs=75.5
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhh
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~ 84 (91)
.+.+...++|++|.+++..+.+|+|+||.|||+... .|.+.++|+++++++||+.+|||++...++.++|+++
T Consensus 109 n~~la~aisG~~At~~sDAvm~P~dvVKQR~Qm~~~-------~y~sv~~ci~~v~r~EGl~AFYrsY~T~l~MniPfta 181 (302)
T KOG0760|consen 109 NNPLAYAISGACATLISDAVMNPFDVVKQRMQMYNS-------PYKSVWDCIRTVYRNEGLGAFYRSYPTQLAMNIPFTA 181 (302)
T ss_pred ccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccC-------CCccHHHHHHHHHHhcchhHhhhccceeeeecCccce
Confidence 346888999999999999999999999999999875 5899999999999999999999999999999999999
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
++|.+||
T Consensus 182 ihf~tYE 188 (302)
T KOG0760|consen 182 IHFMTYE 188 (302)
T ss_pred eehhhHH
Confidence 9999997
No 24
>KOG0768|consensus
Probab=99.81 E-value=6.1e-20 Score=117.36 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=74.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
+..+...+++||++++++++++..|.|++|+|+|+... .+..++++.|+++||++|||||+..+++|.+|.
T Consensus 132 ~~~~~~~h~~A~slg~i~a~~irvP~EvvKQR~Q~~~~---------~~~~~~~~~i~~~~G~~GlYrG~gstl~ReiPf 202 (323)
T KOG0768|consen 132 DAFSVQVHMVAGSLGEIVACLIRVPTEVVKQRAQAGQF---------ERLCQILRSIISKEGFRGLYRGYGSTLLREIPF 202 (323)
T ss_pred cchhHHHHHHHHHHHHHHHHhhhchHHHHHHHHHhhcc---------chHHHHHHHHHHhhccchhhhhhhHHHhhcCCH
Confidence 45667889999999999999999999999999999764 468999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
..++|.+||
T Consensus 203 ~~iqf~lyE 211 (323)
T KOG0768|consen 203 SAIQFPLYE 211 (323)
T ss_pred HHHHhHHHH
Confidence 999999997
No 25
>KOG0758|consensus
Probab=99.81 E-value=5.7e-21 Score=120.89 Aligned_cols=81 Identities=27% Similarity=0.530 Sum_probs=76.4
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhh
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~ 84 (91)
.+.+.++++|.++|++..++.+|+|+||+|+|+++.. .|++.++|+++++++||++|||||..+.++...+..+
T Consensus 11 ~~~~kdf~AG~~gG~~~vlVGhPfDTvKVRlQt~~~~------~y~~~~~c~~~t~~~Eg~~GfYkGm~~Pligv~~~~s 84 (297)
T KOG0758|consen 11 GSPLKDFVAGGVGGAAQVLVGHPFDTVKVRLQTQNTP------VYKGTLDCVKKTLKNEGVKGFYKGMTAPLIGVGPINS 84 (297)
T ss_pred cccHHHHHHhhhhhhhhhhccCCccceEEeeeccCCC------CcccHHHHHHHHHHhcchhhhhcccccchhhhhhhhe
Confidence 3568999999999999999999999999999999875 3999999999999999999999999999999999999
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
+.|+.|+
T Consensus 85 v~F~~y~ 91 (297)
T KOG0758|consen 85 VLFGVYG 91 (297)
T ss_pred ehhhhHH
Confidence 9999985
No 26
>KOG0750|consensus
Probab=99.78 E-value=2.4e-19 Score=111.92 Aligned_cols=83 Identities=25% Similarity=0.471 Sum_probs=72.9
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
+..++.+|++|.++|+.+.+++.|+||||||+|+-+. ++..|+++.+|+++++++||+.+||+|..++++-..|..
T Consensus 208 ~avF~~sF~agl~~gs~sa~~vtPlDVvKTRiQ~~~~----ned~~~gi~d~~~~~lk~EGptAffKG~~cr~lv~aPlF 283 (304)
T KOG0750|consen 208 AAVFYQSFLAGLVAGSASAIVVTPLDVVKTRIQTLGD----NEDNYKGIFDCVKNTLKNEGPTAFFKGATCRMLVTAPLF 283 (304)
T ss_pred chhhHHHHHHHHHhhhhhhhhcccHHHHHHHHhhccc----CccccccHHHHHHHHHHhhChHHHhcccccceeeecchh
Confidence 3458999999999999999999999999999997643 346799999999999999999999999999999888877
Q ss_pred hhhhhcc
Q psy14349 84 ALNFEYW 90 (91)
Q Consensus 84 ~i~~~~y 90 (91)
++....|
T Consensus 284 giAq~vy 290 (304)
T KOG0750|consen 284 GIAQTVY 290 (304)
T ss_pred hhhhhhh
Confidence 7665544
No 27
>KOG0759|consensus
Probab=99.78 E-value=3.2e-19 Score=112.11 Aligned_cols=89 Identities=21% Similarity=0.376 Sum_probs=84.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
++++.......|++||++..++.+|.|++-+|||.+...+....++|++.+|.+.+|+|+||+..||||+.+++.|.+..
T Consensus 92 ~~~~~~~k~~~g~~AGa~Gg~vGtPadv~~VRMQ~D~~LP~~~RRNYknv~dgL~rI~reEG~~~L~~G~~~tv~Ra~lv 171 (286)
T KOG0759|consen 92 KPLPLLGKALLGGIAGAIGGVVGTPADVANVRMQADGRLPPEQRRNYKNVFDGLVRITREEGVTALFRGCKPTVSRAMLV 171 (286)
T ss_pred CCccHHHHHHHHHHHHHhhhhcCCHHHHHHHHHhccCCCCHHHhhhhhhHhhHHhhhhhhhhHHHHHcCchHHHHHHHHH
Confidence 45678899999999999999999999999999999999888888999999999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
+..+..+||
T Consensus 172 t~~QlA~Yd 180 (286)
T KOG0759|consen 172 TASQLASYD 180 (286)
T ss_pred HHHHHHHHH
Confidence 999999886
No 28
>KOG0769|consensus
Probab=99.77 E-value=5e-19 Score=111.00 Aligned_cols=82 Identities=26% Similarity=0.399 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhhh
Q psy14349 7 FVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQALN 86 (91)
Q Consensus 7 ~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i~ 86 (91)
.+.+.++|+++++++.+++||+|++|+|+|.+..-. ++.+|++..+++.+|+++||+.++|+|+.|.+...+.++++|
T Consensus 3 sl~~A~sGAvGs~iA~t~~YPLDT~ksr~Q~e~~~~--~~~k~r~t~dvm~eiik~eg~lsLYqGl~p~~~~t~iSnFVY 80 (308)
T KOG0769|consen 3 SLVHALSGAVGSLIAMTIFYPLDTVKSRLQAEVRVR--GQRKYRYTSDVMWEIIKEEGVLSLYQGLGPVLVSTFISNFVY 80 (308)
T ss_pred hHHHHhhhhHHHHHHHHhhcchHHHHHHHHHHHHhh--hccchhHHHHHHHHHHhccchHHHhccccHHHHHHHHhhhHh
Confidence 356889999999999999999999999999987432 457899999999999999999999999999999999999999
Q ss_pred hhcc
Q psy14349 87 FEYW 90 (91)
Q Consensus 87 ~~~y 90 (91)
|..|
T Consensus 81 FY~y 84 (308)
T KOG0769|consen 81 FYTY 84 (308)
T ss_pred hhhH
Confidence 9987
No 29
>KOG0766|consensus
Probab=99.75 E-value=3.5e-19 Score=109.43 Aligned_cols=77 Identities=19% Similarity=0.434 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhhhh
Q psy14349 8 VHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQALNF 87 (91)
Q Consensus 8 ~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i~~ 87 (91)
..++.+|.++|..++.+++|+|+||||||..+. +|.++.+++.-|+++||++||+.|..++++|-....++.|
T Consensus 214 ivN~~sgi~sg~lAt~vT~Pfd~iKTrmQLeP~-------kf~n~~~~~tli~kneg~rgff~G~~~R~lRkt~sa~iaW 286 (297)
T KOG0766|consen 214 IVNFSSGIFSGILATLVTQPFDVIKTRMQLEPL-------KFQNIGQAVTLIFKNEGLRGFFQGGIPRALRKTLSAAIAW 286 (297)
T ss_pred eeehhHHHHHHHHHHHhcCchhhhhhhhccchH-------HhhhhhhheeeeeccccHHHHhhcccHHHHHHHHHHhhHH
Confidence 567889999999999999999999999999874 6899999999999999999999999999999999999999
Q ss_pred hccC
Q psy14349 88 EYWN 91 (91)
Q Consensus 88 ~~ye 91 (91)
.+||
T Consensus 287 ~vYE 290 (297)
T KOG0766|consen 287 TVYE 290 (297)
T ss_pred HHHH
Confidence 9997
No 30
>KOG0751|consensus
Probab=99.74 E-value=4.8e-19 Score=118.72 Aligned_cols=82 Identities=27% Similarity=0.476 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCcc-ccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhhhh
Q psy14349 9 HDFVVGGIAATISKTTVAPIERVKILLQIQDSSKN-IAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQALNF 87 (91)
Q Consensus 9 ~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~-~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i~~ 87 (91)
-+|..|.+||++.++++||+|.||||||.|..... .++..|++-++|++++++.||+.|+|||+.|.++..+|.-+|.+
T Consensus 348 YrF~LGSvAGavGATaVYPIDlvKTRMQnQRs~gs~vge~~YkNS~DCfkKv~r~EG~~GLYrGLlPQliGVAPEKAIKL 427 (694)
T KOG0751|consen 348 YRFTLGSVAGAVGATAVYPIDLVKTRMQNQRSSGSFVGELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLIGVAPEKAIKL 427 (694)
T ss_pred HhhcchhhhccccceeEeeHHHHHHHHHhhccccceeehhhhcchHHHHHHHHhhhhHHHHHhhhhhhhhccCcHhhhhh
Confidence 45888999999999999999999999999986532 35678999999999999999999999999999999999998887
Q ss_pred hcc
Q psy14349 88 EYW 90 (91)
Q Consensus 88 ~~y 90 (91)
.+-
T Consensus 428 TvN 430 (694)
T KOG0751|consen 428 TVN 430 (694)
T ss_pred hHH
Confidence 653
No 31
>KOG0761|consensus
Probab=99.73 E-value=4.6e-19 Score=113.48 Aligned_cols=86 Identities=23% Similarity=0.311 Sum_probs=75.2
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhh
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~ 84 (91)
.++..+|++|++||.+++++|+|+||+|||-|.+... ...+...++.+..+++|++++|++|||.|+.|++++..|..+
T Consensus 260 ~~f~~sF~sG~iaGtvAAi~T~PfDV~KT~~QI~~~~-~~~~~~~~st~~~l~~i~~~~G~~~L~sG~~pR~iKvaPscA 338 (361)
T KOG0761|consen 260 SSFGASFVSGFIAGTVAAIATCPFDVVKTRRQIEGGT-SDDDRMTRSTFMTLKTIWRTGGLKGLFSGLLPRLIKVAPSCA 338 (361)
T ss_pred CceeeeehhhhHHHHHHHHHcCCchhhhHHHHHhcCC-CCCccccchhhhhhHHHHHccchhhhhhccccceeeecCcee
Confidence 4567789999999999999999999999999998764 112234467888899999999999999999999999999999
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
|...+||
T Consensus 339 ImIS~YE 345 (361)
T KOG0761|consen 339 IMISTYE 345 (361)
T ss_pred EEeeHHH
Confidence 9988887
No 32
>KOG0765|consensus
Probab=99.73 E-value=1.7e-18 Score=109.41 Aligned_cols=79 Identities=16% Similarity=0.266 Sum_probs=68.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhh
Q psy14349 6 DFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQAL 85 (91)
Q Consensus 6 ~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i 85 (91)
......++|.+||+.++++|+|+|+||+|+|+.... +..+.+.++++++|||+.+||||++|+++...+++..
T Consensus 245 ~l~vQavsg~lag~tsti~TnPlD~irtRLQV~~~~-------~~~~~qt~r~L~~Eeg~~~f~kGL~pR~is~s~~s~~ 317 (333)
T KOG0765|consen 245 HLFVQAVSGALAGATSTILTNPLDTIRTRLQVHRGE-------SMPIIQTVRTLLREEGWAGFYKGLGPRIISMSMSSTS 317 (333)
T ss_pred eeeeeehhhhhhhhhHHHhcCcHHHHHHHHhhcccc-------cchHHHHHHHHHHhcCceeeecCcchhHhhcccccee
Confidence 345678999999999999999999999999998864 2337799999999999999999999999998888777
Q ss_pred hhhccC
Q psy14349 86 NFEYWN 91 (91)
Q Consensus 86 ~~~~ye 91 (91)
....||
T Consensus 318 mI~gYE 323 (333)
T KOG0765|consen 318 MIVGYE 323 (333)
T ss_pred EeehHH
Confidence 666665
No 33
>KOG0770|consensus
Probab=99.72 E-value=6.3e-18 Score=106.19 Aligned_cols=86 Identities=23% Similarity=0.341 Sum_probs=77.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccc---cccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 6 DFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNI---AARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 6 ~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~---~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
..|.+++||.+...+++++--|-||+|+|||.|+....+ ....|.+...+++.|+||||+++||.|+.+++.|++|.
T Consensus 126 ~t~~hl~AGfvGD~~~SfvYVPsEVlKtRlQlQGR~nnP~fqsgynY~~~rga~k~i~KeeG~k~lf~GY~aTlaRDvPF 205 (353)
T KOG0770|consen 126 GTWAHLIAGFVGDTLGSFVYVPSEVLKTRLQLQGRNNNPVFQSGYNYGYYRGAFKAIWKEEGPKGLFAGYWATLARDVPF 205 (353)
T ss_pred cHHHHHHHHHHHhhhcceEEeeHHHHHHHHhHhcccCCCcccCCCchHHHHHHHHHHHHHhCcchhhhHHHHHHHhcCCc
Confidence 468899999999999999999999999999999754221 34678889999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
+++++.+||
T Consensus 206 sglq~~FYE 214 (353)
T KOG0770|consen 206 SGLQVVFYE 214 (353)
T ss_pred hhhHHHHHH
Confidence 999999997
No 34
>KOG0754|consensus
Probab=99.71 E-value=1.5e-18 Score=107.75 Aligned_cols=86 Identities=16% Similarity=0.302 Sum_probs=77.1
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
....+..+++|+++|.+++++..|+|++|.|+|... ..++..+|+..+..+..++||||+++||+|+.|.++|-.|..
T Consensus 199 ~~~~~~~~i~g~l~gtla~~ln~pfDVaKsRIQgpq--p~~~~~KY~wt~~ti~~vyrEEGF~ALYKGl~pkvmRLgPGG 276 (294)
T KOG0754|consen 199 TLEIRRKLIIGALAGTLACVLNTPFDVAKSRIQGPQ--PVPGERKYNWTLPTILTVYREEGFRALYKGLVPKVMRLGPGG 276 (294)
T ss_pred HHHHHHHHHHHHhhhhhhhhccChhHHhHhhccCCC--CCCCeeccceechHHHHHHHHhhHHHHHhhhhhhheeecCCc
Confidence 356788999999999999999999999999999832 223668999999999999999999999999999999999999
Q ss_pred hhhhhccC
Q psy14349 84 ALNFEYWN 91 (91)
Q Consensus 84 ~i~~~~ye 91 (91)
++.+.+||
T Consensus 277 a~lLvVf~ 284 (294)
T KOG0754|consen 277 AVLLVVFE 284 (294)
T ss_pred eEEEEEhH
Confidence 99888775
No 35
>KOG0770|consensus
Probab=99.71 E-value=4.7e-19 Score=111.22 Aligned_cols=84 Identities=21% Similarity=0.372 Sum_probs=77.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchh-hcccccHHHHHHHhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTL-SFWRGNSANILRYFP 81 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~-g~y~G~~~~~~~~~~ 81 (91)
+....|..+++|+++|+.+..+++|+|++|||.|.+... .+|+++++|.+.||-+||++ |||+|+.|.++...|
T Consensus 28 d~~~vwh~~~~GGIgGa~gd~~MHslDTvKTRqQ~a~~~-----nky~~m~~~yrTiw~eeGv~~GlY~Gi~p~~~GSlp 102 (353)
T KOG0770|consen 28 DQFFVWHEFLWGGIGGAFGDGMMHSLDTVKTRQQSAIIM-----NKYQSMLQMYRTIWVEEGVKRGLYRGIAPGVTGSLP 102 (353)
T ss_pred ccchhhhhheecccccccccccccchhHHHHHHhhhhHH-----HHHHHHHHHHHHHhhhhchhhhhhcccchHhhCCCc
Confidence 345678999999999999999999999999999998754 46889999999999999987 999999999999999
Q ss_pred hhhhhhhccC
Q psy14349 82 AQALNFEYWN 91 (91)
Q Consensus 82 ~~~i~~~~ye 91 (91)
..+++|++||
T Consensus 103 t~A~fFg~yE 112 (353)
T KOG0770|consen 103 TGATFFGFYE 112 (353)
T ss_pred ccceeeehhH
Confidence 9999999997
No 36
>KOG0763|consensus
Probab=99.69 E-value=1.7e-17 Score=102.04 Aligned_cols=89 Identities=25% Similarity=0.293 Sum_probs=77.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccc--cccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNI--AARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYF 80 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~--~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~ 80 (91)
.+++.+++..+|.+|.+.++++.+|.|+||.|+|....-+.. ..+...+.|...|.|+|++|++|||+|+.++++|.+
T Consensus 108 ~~lt~lqnA~aGSlAa~Faal~LCPTELvKCkLQa~rEMk~~~~~a~~~~Tpwsv~r~I~k~~G~rGFy~GlssTllrEv 187 (301)
T KOG0763|consen 108 AKLTDLQNAAAGSLAAAFAALVLCPTELVKCKLQAMREMKNSGKIAKSINTPWSVTRYILKKDGPRGFYHGLSSTLLREV 187 (301)
T ss_pred hhcchhHHHhhhhHHHHHHHHHhCcHHHHHHHHHHHHHHHhcccchhccCChHHHHHHHHhccCcceeeecCcHHHHHhC
Confidence 356788999999999999999999999999999986543211 224557899999999999999999999999999999
Q ss_pred hhhhhhhhccC
Q psy14349 81 PAQALNFEYWN 91 (91)
Q Consensus 81 ~~~~i~~~~ye 91 (91)
|....+|+.||
T Consensus 188 PGYFFFFG~YE 198 (301)
T KOG0763|consen 188 PGYFFFFGGYE 198 (301)
T ss_pred CceEEEecchH
Confidence 99999999987
No 37
>KOG0036|consensus
Probab=99.69 E-value=1.3e-18 Score=114.34 Aligned_cols=81 Identities=30% Similarity=0.566 Sum_probs=75.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhh
Q psy14349 6 DFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQAL 85 (91)
Q Consensus 6 ~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i 85 (91)
.+|..++||++||+++.++|.|+|.+|+-+|+++.. ....++..+++.++++.|+++||||.+.++++.+|-+++
T Consensus 186 ~ww~~liAGGiAGavSRTcTAPlDRLKV~lqv~~~k-----~~~~~v~~~~k~l~~eggiksf~rGNGiNViKvaPESaI 260 (463)
T KOG0036|consen 186 RWWGFLIAGGIAGAVSRTCTAPLDRLKVFLQVQSPK-----ANILPLLKAVKSLWREGGIKSFFRGNGLNVIKVAPESAI 260 (463)
T ss_pred chhhhhccccccccccccccCchhhhheeeeccCCC-----CCcccHHHHHHHHHhccCceeeeccCceeeEEecchhhH
Confidence 468999999999999999999999999999999864 345689999999999999999999999999999999999
Q ss_pred hhhccC
Q psy14349 86 NFEYWN 91 (91)
Q Consensus 86 ~~~~ye 91 (91)
.|..||
T Consensus 261 KF~ayE 266 (463)
T KOG0036|consen 261 KFGAYE 266 (463)
T ss_pred hhhhHH
Confidence 999997
No 38
>KOG0761|consensus
Probab=99.68 E-value=1.4e-17 Score=106.68 Aligned_cols=83 Identities=24% Similarity=0.373 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccc-cCC-CCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhhh
Q psy14349 9 HDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAA-RRY-RGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQALN 86 (91)
Q Consensus 9 ~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~-~~~-~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i~ 86 (91)
..+++|++|..++.++.+|+|++|||||+......+.+ +.+ ..+.++.+....+.|+++||+|+.++++|++|+++++
T Consensus 158 ~~~vaG~iAR~~A~TvvsPiEL~RTkmQa~~~ty~~~k~~~~~~ev~~~vr~~~a~~g~r~Lw~Gl~~tl~RDVPFSAiy 237 (361)
T KOG0761|consen 158 VPLVAGAIARSLAVTVVSPIELARTKMQAFKGTYAGVKPPVFKTEVGVFVRVKVANNGYRSLWRGLGPTLLRDVPFSAIY 237 (361)
T ss_pred HHHHHHHhhhheeeEEechHHHHHHHHHhhccccCCcCcchHHHHHhhHHHHHHhcccHHHHHhccchhhhhcCCcceeh
Confidence 34789999999999999999999999999876532211 111 2567788889999999999999999999999999999
Q ss_pred hhccC
Q psy14349 87 FEYWN 91 (91)
Q Consensus 87 ~~~ye 91 (91)
|..||
T Consensus 238 W~~yE 242 (361)
T KOG0761|consen 238 WSSYE 242 (361)
T ss_pred hhhHH
Confidence 99997
No 39
>KOG0036|consensus
Probab=99.66 E-value=1.5e-17 Score=109.32 Aligned_cols=83 Identities=19% Similarity=0.408 Sum_probs=76.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
++++....++||.+||+++.+..||+|++|+|+|..... ++.+++++.++|+..||+++||||+.|+++..+|+
T Consensus 278 e~ls~~~rl~AGglAGavAQ~~IYPmd~lKtRlq~~~~~------~~~~~l~~ak~il~~eg~r~FykG~~p~llGIiPy 351 (463)
T KOG0036|consen 278 EDLSTFERLLAGGLAGAVAQTSIYPMDTLKTRLQCRPLG------QGKGLLKLAKDILFQEGPRAFYKGYLPNLLGIIPY 351 (463)
T ss_pred hhcchhhhhhccCchhHHHHhhcChHHHHHHHhhccccc------chhhhhhhhhhHHHhhhHHHHHhccccceeEeccc
Confidence 467788899999999999999999999999999998765 34589999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
.++-++.||
T Consensus 352 agidLa~ye 360 (463)
T KOG0036|consen 352 AGIDLAVYE 360 (463)
T ss_pred ccchHHHHH
Confidence 999999886
No 40
>KOG0755|consensus
Probab=99.66 E-value=4.4e-18 Score=105.74 Aligned_cols=86 Identities=27% Similarity=0.441 Sum_probs=76.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccc--cccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 6 DFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNI--AARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 6 ~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~--~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
.....|++|++|.+.+.++++|+|+||+|+|.|+..... ....|+++.+++..|.|+||++|+-||+.|.+.-++.-+
T Consensus 21 ~~~s~Fv~GGlAa~gA~~~TNPiEvIKtRiQLQGelaa~g~~a~~YKsv~qaf~~iakneGI~GLQkGL~~A~~yQ~~lN 100 (320)
T KOG0755|consen 21 MATSDFVLGGLAACGAVTFTNPIEVIKTRIQLQGELAARGPSARPYKSVGQAFSTIAKNEGIRGLQKGLAPAYVYQICLN 100 (320)
T ss_pred hcccchhhcchhhheeeEecChHHHhhhhhhhhhhhhccCCccchhhhhhhhhhhhhcccchHHHhcccchhheeeeeec
Confidence 345679999999999999999999999999999875433 346799999999999999999999999999999999889
Q ss_pred hhhhhccC
Q psy14349 84 ALNFEYWN 91 (91)
Q Consensus 84 ~i~~~~ye 91 (91)
+..+++||
T Consensus 101 ~~RL~~Ye 108 (320)
T KOG0755|consen 101 GFRLGFYE 108 (320)
T ss_pred ceeeeecc
Confidence 99998886
No 41
>KOG0767|consensus
Probab=99.65 E-value=5.9e-17 Score=102.00 Aligned_cols=79 Identities=23% Similarity=0.343 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhh
Q psy14349 6 DFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQAL 85 (91)
Q Consensus 6 ~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i 85 (91)
.....+.+++.|..++.+..+|+|.+|+|+|+++.- .+++.+++.+|+++||+.|||||+.|-+.|++|++..
T Consensus 134 rtsiYlaaSAsAEf~ADiaLcP~EA~KVRvQT~P~f-------a~~l~~~~pki~k~EG~~~fykGl~PLW~RQIPYtmm 206 (333)
T KOG0767|consen 134 RTSIYLAASASAEFFADIALCPMEAVKVRVQTQPGF-------ANTLRDGFPKIYKEEGLGGFYKGLVPLWMRQIPYTMM 206 (333)
T ss_pred hhhhhhhhhhHHHHHHHHHhCchhhheEEEeccCcc-------cchhHHHHHHHHHHhhhhhHhcCCchHHHhcccHHHH
Confidence 356778999999999999999999999999998764 3689999999999999999999999999999999999
Q ss_pred hhhccC
Q psy14349 86 NFEYWN 91 (91)
Q Consensus 86 ~~~~ye 91 (91)
.|..||
T Consensus 207 KFa~FE 212 (333)
T KOG0767|consen 207 KFACFE 212 (333)
T ss_pred HHHHHH
Confidence 999886
No 42
>KOG0769|consensus
Probab=99.65 E-value=6.9e-16 Score=97.03 Aligned_cols=89 Identities=29% Similarity=0.384 Sum_probs=76.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccc----cCCCCHHHHHHHHHHhhchhhcccccHHHHHH
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAA----RRYRGIGDCFVRIHKEQGTLSFWRGNSANILR 78 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~----~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~ 78 (91)
+.++.+..|+.|++|.++++++|||+-++|+++|.......+.. ..-+++.+.+..+++.||++|||||+.+.++.
T Consensus 200 ~~lsal~~FilGAvaK~~ATvvTYPli~vksmlqa~~~~~~n~~~~~~g~~r~il~ll~~~~r~eGi~Gl~KGl~akilq 279 (308)
T KOG0769|consen 200 GVLSALMAFILGAVAKAIATVVTYPLIVVKSMLQAADSSKENKQKKPRGSTRTILGLLYAIWRKEGILGLFKGLEAKILQ 279 (308)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhccccccChhhcccccccchHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34677889999999999999999999999999999755433222 22347899999999999999999999999999
Q ss_pred HhhhhhhhhhccC
Q psy14349 79 YFPAQALNFEYWN 91 (91)
Q Consensus 79 ~~~~~~i~~~~ye 91 (91)
.+...++.|.+||
T Consensus 280 tVLtaALlfmikE 292 (308)
T KOG0769|consen 280 TVLTAALLFMIKE 292 (308)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999886
No 43
>KOG0766|consensus
Probab=99.63 E-value=1.6e-16 Score=97.81 Aligned_cols=75 Identities=24% Similarity=0.475 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhh
Q psy14349 6 DFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQAL 85 (91)
Q Consensus 6 ~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i 85 (91)
+...++++|.++|.++++..+|+|.+|||+|.... .+++..+++|+++|++.++|||..|+++|..+..++
T Consensus 13 ~~skhl~~G~~gG~~St~~lQPLDLLKTR~Qq~qr---------~~l~k~l~~iv~~~s~l~LWkGtlPSilR~~~Gs~~ 83 (297)
T KOG0766|consen 13 PVSKHLLCGSIGGTCSTLLLQPLDLLKTRLQQLQR---------VGLLKVLLKIVRTESLLGLWKGTLPSILRCVPGSGI 83 (297)
T ss_pred ccHHHHhhcccccchhhhhcCcHHHHHHHHHHHHH---------hhHHHHHHHHHhccchHHhhcccchhhhhcccCcee
Confidence 56789999999999999999999999999998653 589999999999999999999999999999999999
Q ss_pred hhhc
Q psy14349 86 NFEY 89 (91)
Q Consensus 86 ~~~~ 89 (91)
+|.+
T Consensus 84 Yf~~ 87 (297)
T KOG0766|consen 84 YFGT 87 (297)
T ss_pred hhhh
Confidence 9875
No 44
>KOG0749|consensus
Probab=99.62 E-value=9.5e-16 Score=96.19 Aligned_cols=82 Identities=27% Similarity=0.468 Sum_probs=68.6
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
+.+++.+++.+...-..+..++||+|+||.||+..+. ...+|++.++|+++|+++||..+||||...|++|..- .
T Consensus 210 ~~~f~~sf~iaq~vT~~ag~~sYP~DTVRRRmm~~~~----~~~~Y~~TldC~rkI~k~EG~~affkGa~sNilRg~g-g 284 (298)
T KOG0749|consen 210 NGNFAASFAIAQVVTTGAGLLSYPLDTVRRRMMQSKG----ADLKYTGTLDCWRKIYKEEGGKAFFKGALSNILRGTG-G 284 (298)
T ss_pred cchHHHHHHHHHHHHHhcccccccchHHHHHHhhccC----cccccCcHHHHHHHHHHHhchHHHhhhHHHHHhhccc-h
Confidence 4678889999999999999999999999999544333 4478999999999999999999999999999999874 4
Q ss_pred hhhhhcc
Q psy14349 84 ALNFEYW 90 (91)
Q Consensus 84 ~i~~~~y 90 (91)
+.-..+|
T Consensus 285 A~Vl~~Y 291 (298)
T KOG0749|consen 285 ALVLALY 291 (298)
T ss_pred hhhhHHH
Confidence 4444444
No 45
>KOG0749|consensus
Probab=99.62 E-value=1.1e-16 Score=100.40 Aligned_cols=86 Identities=66% Similarity=1.125 Sum_probs=77.3
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhh
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~ 84 (91)
.++...+++|+++++++-+.+.|+|.||.-+|.|.. +-....+|+++.||+.++-+|+|+.+||||..++++|..|..+
T Consensus 10 ~~F~~Dfl~GgvaAavsKTavAPIERVKLlLQ~Q~~-~~~~~~~YkGi~Dc~~r~~~eqG~~sfWRGN~anViRyfPtqA 88 (298)
T KOG0749|consen 10 KSFAKDFLAGGVAAAVSKTAVAPIERVKLLLQVQDS-EIAADKRYKGIVDCFVRIPKEQGFLSFWRGNLANVIRYFPTQA 88 (298)
T ss_pred HHHHHHHHcchHHhhhhhhccccHHHHHHHHHhccc-hhhhccCccchhheeeechhhhhhhheecccccchhhcCchhh
Confidence 457889999999999999999999999999999985 2223458999999999999999999999999999999999999
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
+.|.+.|
T Consensus 89 lNFAFKd 95 (298)
T KOG0749|consen 89 LNFAFKD 95 (298)
T ss_pred hchhHHH
Confidence 9998643
No 46
>KOG0763|consensus
Probab=99.61 E-value=6.4e-17 Score=99.50 Aligned_cols=80 Identities=21% Similarity=0.348 Sum_probs=72.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
+++.+...+++|+++|++-++.++|.|+||.|+|+.+. .+....+-.++|+||++++|+|+.|+++|.+|.
T Consensus 212 deiGpv~tmlaG~vgGicLWtsv~PaDviKSRiQV~~~---------~~fm~t~~avVr~eGi~aLY~GLlpt~lRt~pA 282 (301)
T KOG0763|consen 212 DEIGPVRTMLAGGVGGICLWTSVFPADVIKSRIQVLSM---------NGFMFTLGAVVRNEGILALYSGLLPTMLRTIPA 282 (301)
T ss_pred hhcccHHHHhhcccceeEEEeeeccHHHHhhHheeccc---------chHHHHHHHHHhhhhHHHHHhccchHHHhhccC
Confidence 45678899999999999999999999999999999875 356677778999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
++..|..||
T Consensus 283 ~g~LFvaYE 291 (301)
T KOG0763|consen 283 NGALFVAYE 291 (301)
T ss_pred cceEEEehH
Confidence 999999987
No 47
>KOG0765|consensus
Probab=99.61 E-value=5.1e-16 Score=98.30 Aligned_cols=83 Identities=29% Similarity=0.448 Sum_probs=72.0
Q ss_pred HHHHHH-HHHHHHHHHHhhccHHHHHHHHHhcCCCcccc------------ccCCCCHHHHHHHHHHhhchhhcccccHH
Q psy14349 8 VHDFVV-GGIAATISKTTVAPIERVKILLQIQDSSKNIA------------ARRYRGIGDCFVRIHKEQGTLSFWRGNSA 74 (91)
Q Consensus 8 ~~~~~a-g~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~------------~~~~~~~~~~~~~i~~~~G~~g~y~G~~~ 74 (91)
...+++ |+.|++++..+..|+|+|..++++++...+.+ ..+|.+-.|++++|++.+|++|||||+++
T Consensus 127 ~~aavanGg~ASlaaQsI~vPiDVVSQ~lMvqg~~~~~~~~~~~~~~~~~~~~~~~~g~Dv~rkI~k~DG~rGfYRGf~a 206 (333)
T KOG0765|consen 127 TKAAVANGGSASLAAQSIFVPIDVVSQHLMVQGNSGKATAGHDKSVIRNHGKCRYGNGFDVIRKILKTDGPRGFYRGFGA 206 (333)
T ss_pred HHHHHHcCchHhhhhceeeeeHHHHhhHHHHhcchhhccccCCcCccccccccccccchHHHHHHHHhcCcchhhhhhhh
Confidence 344555 89999999999999999999999987643321 24588899999999999999999999999
Q ss_pred HHHHHhhhhhhhhhcc
Q psy14349 75 NILRYFPAQALNFEYW 90 (91)
Q Consensus 75 ~~~~~~~~~~i~~~~y 90 (91)
+++-.+|+++++|.+|
T Consensus 207 S~ltYvPssAvWWasY 222 (333)
T KOG0765|consen 207 SLLTYVPSSAVWWASY 222 (333)
T ss_pred hhheecCcchhHHHHH
Confidence 9999999999999988
No 48
>KOG0750|consensus
Probab=99.56 E-value=4.3e-16 Score=97.47 Aligned_cols=86 Identities=17% Similarity=0.263 Sum_probs=72.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhh
Q psy14349 2 GGQSDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFP 81 (91)
Q Consensus 2 ~~~~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~ 81 (91)
++.++....++||+++|+...+++.|+|++|.+||.++..... .-....+...+++++||+.++|||++++++|++|
T Consensus 107 d~~~~~~~gmlAG~laG~~qIvvttPmelLKIqmQd~gr~a~~---~~~~at~l~~~lLr~~Gif~LYkG~G~T~aRdvp 183 (304)
T KOG0750|consen 107 DKQLGLGRGMLAGGLAGICQIVVTTPMELLKIQMQDAGRVAAA---TKVFATRLTWKLLRDEGIFGLYKGLGATLARDVP 183 (304)
T ss_pred ccccccchhhhhccccceEEEEEeccHHHHHhhhhcCcccccc---cccchhHHHHHHHHhhhHHHHHhccchhhhccCc
Confidence 4556677779999999998888999999999999998853221 1245567788999999999999999999999999
Q ss_pred hhhhhhhcc
Q psy14349 82 AQALNFEYW 90 (91)
Q Consensus 82 ~~~i~~~~y 90 (91)
.+.++|..+
T Consensus 184 fS~~yFplf 192 (304)
T KOG0750|consen 184 FSFAYFPLF 192 (304)
T ss_pred ccEEeechh
Confidence 999999764
No 49
>KOG0755|consensus
Probab=99.51 E-value=5.1e-15 Score=92.21 Aligned_cols=82 Identities=20% Similarity=0.373 Sum_probs=74.3
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhh
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~ 84 (91)
.+...++.+|.++|..-++..+|+|+|-||+-.|... .-|++..||+.+++|.||+-++|+|+++.++|..|.+.
T Consensus 226 ~~~i~~lta~~isG~~vsvam~p~Dvv~TRlYNQ~~d-----~lYkg~iDC~lk~lRsEGv~~lYKGF~a~~~RiAPht~ 300 (320)
T KOG0755|consen 226 EGTILHLTASLISGSGVSVAMTPFDVVTTRLYNQKVD-----ELYKGPIDCILKTLRSEGVYALYKGFWAHYLRIAPHTI 300 (320)
T ss_pred cchHHHhhHhhhcccceEEEecchHHHHHHHHhcccc-----hhhcCcHHHHHHHHHhhhHHHHHhhHHHHHhhcCcchh
Confidence 4567789999999998889999999999999988764 47999999999999999999999999999999999998
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
+.+.++|
T Consensus 301 l~L~F~e 307 (320)
T KOG0755|consen 301 LCLTFFE 307 (320)
T ss_pred hHHHHHH
Confidence 8877765
No 50
>KOG0767|consensus
Probab=99.50 E-value=2.9e-16 Score=98.92 Aligned_cols=72 Identities=24% Similarity=0.422 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhhhhhccC
Q psy14349 13 VGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQALNFEYWN 91 (91)
Q Consensus 13 ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i~~~~ye 91 (91)
+|.++....-+...|+|+||.|||+++. +|+++.+.++.+++|||++|||||+.|+++.........|+.||
T Consensus 44 gG~lsCG~TH~aitPLDlvKcrmQv~P~-------kY~~~~~GFk~~iaeeG~rgl~~Gw~pTllGYS~QG~~KfG~YE 115 (333)
T KOG0767|consen 44 GGILSCGTTHTAITPLDLVKCRMQVDPA-------KYKSIVQGFKVTIAEEGVRGLARGWAPTLLGYSAQGAGKFGFYE 115 (333)
T ss_pred cceeccccccccccchhheeeeeeeChh-------hhccchhHHHHHHHhhhhHHHHhccccceeceecccccccchHH
Confidence 3444444444566799999999999885 69999999999999999999999999999999999999999987
No 51
>KOG0756|consensus
Probab=99.42 E-value=9.1e-15 Score=93.02 Aligned_cols=87 Identities=24% Similarity=0.301 Sum_probs=71.8
Q ss_pred CchhHHHHHHHHHHHHHHH-HhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhh
Q psy14349 4 QSDFVHDFVVGGIAATISK-TTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPA 82 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~-~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~ 82 (91)
.++....+++|.-||+..+ .+..|+|+||++.+.+..... ...++.+.++++++|+||||++|+|||..+..+|+.++
T Consensus 104 ~ls~~~~lL~GlGAgv~eAv~~v~P~e~vKta~i~~~~~~~-~~~~~~g~~~~~~~IvkeeGi~gi~~Gv~at~~rQ~tN 182 (299)
T KOG0756|consen 104 NLSPVRRLLCGLGAGVAEAVAVVTPMECVKTAFIQDKKSPS-PKYKQKGFIHVVRHIVKEEGIRGIYRGVTATAARQGTN 182 (299)
T ss_pred CcCcccceecccchheeeeeEEeeceeeeeehhhhhccCCC-cccccccHHHHHHHHHHhcCccccccCccHHHHHhccc
Confidence 3455667888888886654 468999999999888765432 22344699999999999999999999999999999999
Q ss_pred hhhhhhccC
Q psy14349 83 QALNFEYWN 91 (91)
Q Consensus 83 ~~i~~~~ye 91 (91)
+++.|+.|+
T Consensus 183 qa~rF~~~~ 191 (299)
T KOG0756|consen 183 QAIRFTLYT 191 (299)
T ss_pred ccceehhhH
Confidence 999998873
No 52
>KOG1519|consensus
Probab=99.31 E-value=7.5e-12 Score=76.46 Aligned_cols=79 Identities=23% Similarity=0.383 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhc--hhhcccccHHHHHHHhhhhh
Q psy14349 7 FVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQG--TLSFWRGNSANILRYFPAQA 84 (91)
Q Consensus 7 ~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G--~~g~y~G~~~~~~~~~~~~~ 84 (91)
....|++|++-|+.-.+...|+.|||+|||++-.. +|.+...++++||.++. +.++|+|...+..|....|+
T Consensus 211 Lv~DFiAG~LLGA~l~~~FFPi~VvKt~MQsqiG~------efqS~~KVFqkiW~~RdRkL~~Lf~GaHLNy~RSLisWG 284 (297)
T KOG1519|consen 211 LVNDFIAGGLLGAMLGFLFFPINVVKTRMQSQIGG------EFQSFPKVFQKIWLERDRKLINLFRGAHLNYHRSLISWG 284 (297)
T ss_pred HHHHHhhhhHHHHHHHHhhccHHHHHHHHHHHhCc------cccchHHHHHHHHHHhhHHHHHHHhhhhhhhhHHHHHHH
Confidence 46789999999999999999999999999998764 68999999999997664 88999999999999999999
Q ss_pred hhhhccC
Q psy14349 85 LNFEYWN 91 (91)
Q Consensus 85 i~~~~ye 91 (91)
+--..||
T Consensus 285 IINa~Y~ 291 (297)
T KOG1519|consen 285 IINATYE 291 (297)
T ss_pred HHHHHHH
Confidence 9888875
No 53
>KOG2954|consensus
Probab=99.19 E-value=8.9e-11 Score=76.21 Aligned_cols=77 Identities=23% Similarity=0.327 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCcc-----------ccccCCCCHHHHHHHHHHhhchhhcccccHHHHH
Q psy14349 9 HDFVVGGIAATISKTTVAPIERVKILLQIQDSSKN-----------IAARRYRGIGDCFVRIHKEQGTLSFWRGNSANIL 77 (91)
Q Consensus 9 ~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~-----------~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~ 77 (91)
..+.|+.+|-+...++.+|+|+|-.||+.|+.+.- +...+|.+.+||.+.+..+||+.|||+|+++-++
T Consensus 278 p~~~A~~~aml~TdvilyPfETIlHRl~iQGTRTiIDNlDtGysvvpi~t~Y~G~fDC~rt~~~sEGv~glYkGfGAvil 357 (427)
T KOG2954|consen 278 PQMYAQLIAMLTTDVILYPFETILHRLYIQGTRTIIDNLDTGYSVVPILTKYSGYFDCYRTTLESEGVWGLYKGFGAVIL 357 (427)
T ss_pred HHHHHHHHHHHhhhhhhccHHHHHHHHhccceeeeeeccCCcceeeEeeeccchHHHHHHHHHHhhhHHHHHhhhhHHHH
Confidence 45677888888888999999999999999986421 1237899999999999999999999999999988
Q ss_pred HHhhhhhh
Q psy14349 78 RYFPAQAL 85 (91)
Q Consensus 78 ~~~~~~~i 85 (91)
......++
T Consensus 358 qy~lh~av 365 (427)
T KOG2954|consen 358 QYSLHVAV 365 (427)
T ss_pred HHHHHHHH
Confidence 77665554
No 54
>KOG2745|consensus
Probab=98.92 E-value=7.2e-10 Score=70.36 Aligned_cols=65 Identities=15% Similarity=0.297 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhh
Q psy14349 14 GGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFP 81 (91)
Q Consensus 14 g~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~ 81 (91)
-.+.-+++.++++|+.||-.|+++|-.. .+.+|.+..+.+-+|+|+||+.|||.|+.|.++.+..
T Consensus 143 d~v~~~~~v~~ahPFhVi~~R~maQfVG---rEtkYtg~~~Sl~~I~kqEG~~GfFaGLvP~LLGdl~ 207 (321)
T KOG2745|consen 143 DSVIRVVAVVAAHPFHVISLRQMAQFVG---RETKYTGLVGSLATIGKQEGIAGFFAGLVPRLLGDLL 207 (321)
T ss_pred HHHHHHHHHhhcCceeeeeHHHHHHHHc---ccchhhHHHHHHHHHHHhcchhhHHhhhhHHHHhhHH
Confidence 4566677888999999999999998665 5679999999999999999999999999999998763
No 55
>KOG1519|consensus
Probab=98.25 E-value=6.7e-06 Score=50.72 Aligned_cols=74 Identities=20% Similarity=0.324 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhhh
Q psy14349 7 FVHDFVVGGIAATISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQALN 86 (91)
Q Consensus 7 ~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i~ 86 (91)
-.++..+|+.|+.....++-|..-+--|.|.-. .+..+++.+ ++.+|++-+|||+.|-+++.....++.
T Consensus 30 e~~H~~~~~~a~~~nv~i~P~~~kVLfrqqly~----------~kT~~aF~q-LR~~GfRn~YRG~~~~Lmqkt~t~al~ 98 (297)
T KOG1519|consen 30 EMKHYLCGCCAAFNNVAITPPIQKVLFRQQLYG----------IKTRDAFLQ-LRRDGFRNLYRGILPPLMQKTTTLALM 98 (297)
T ss_pred hHHHHHHHHHHHhhhhhcChHHHHHHHHHHHhc----------chHHHHHHH-HHHhhHHHHHhcccHHHHhhhhhhhhh
Confidence 457889999998877777765555544555433 245666664 578999999999999999999999999
Q ss_pred hhccC
Q psy14349 87 FEYWN 91 (91)
Q Consensus 87 ~~~ye 91 (91)
|+.||
T Consensus 99 F~L~e 103 (297)
T KOG1519|consen 99 FGLYE 103 (297)
T ss_pred hhccC
Confidence 99997
No 56
>KOG2745|consensus
Probab=98.21 E-value=1.2e-05 Score=51.62 Aligned_cols=72 Identities=15% Similarity=0.078 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHHhcCCCcccc---------ccCCCCHHHHHHHHHHhhchhhcccccHHHHHHHhhhh
Q psy14349 13 VGGIAATISKTTVAPIERVKILLQIQDSSKNIA---------ARRYRGIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQ 83 (91)
Q Consensus 13 ag~~ag~~~~~~~~P~d~ik~r~q~~~~~~~~~---------~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~ 83 (91)
.-.+.++--+.+++|++.+|+-+|..-.+-.+. ....++++.-.++|-..+|..|+|||+.|+++..+..+
T Consensus 22 ~~~~l~lg~saLs~Pl~y~K~LIQlGhEPlpp~~g~~I~gR~v~~LP~~fsYakhI~~idG~~gl~rGLtprL~a~~v~~ 101 (321)
T KOG2745|consen 22 KRFILRLGLSALSHPLEYVKTLIQLGHEPLPPTKGRNILGRPVLFLPNFFSYAKHIGTIDGYIGLYRGLTPRLAASAVQT 101 (321)
T ss_pred HHHHHHhhHHHhhchHHHHHHHHHhCCCCCCCCccceecCccceeCccHHHHHHHHhcccccchhhhcccHHHHHHHHHH
Confidence 333444555678999999999999975532221 12347999999999999999999999999998877654
Q ss_pred h
Q psy14349 84 A 84 (91)
Q Consensus 84 ~ 84 (91)
.
T Consensus 102 v 102 (321)
T KOG2745|consen 102 V 102 (321)
T ss_pred H
Confidence 3
No 57
>KOG2954|consensus
Probab=95.01 E-value=0.011 Score=39.40 Aligned_cols=58 Identities=16% Similarity=0.275 Sum_probs=42.4
Q ss_pred HHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhcccccHHHHH
Q psy14349 19 TISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSFWRGNSANIL 77 (91)
Q Consensus 19 ~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~y~G~~~~~~ 77 (91)
+.-.++.+|+-|+|.+.|+......-. -..-.+..++.+..+++|+..||||.+..++
T Consensus 78 ~TenllsHPc~VLRrQCQV~~~a~~yH-LtPftlip~i~~~~rrQGl~tlWKGmgs~~l 135 (427)
T KOG2954|consen 78 ITENLLSHPCGVLRRQCQVYNAAGSYH-LTPFTLIPVIVHLHRRQGLTTLWKGMGSCLL 135 (427)
T ss_pred HHHhhhcCchhhhhhHhhhhhhcccee-ccceeeeehhhhhhhhccHHHHHhhccceee
Confidence 334678999999999999976532100 0113567788889999999999999887554
No 58
>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.
Probab=84.64 E-value=1.5 Score=22.63 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHH
Q psy14349 8 VHDFVVGGIAATISKTTVAPIERVKILL 35 (91)
Q Consensus 8 ~~~~~ag~~ag~~~~~~~~P~d~ik~r~ 35 (91)
+..++.|+++|++..++..|=.==++|-
T Consensus 2 ~~g~l~Ga~~Ga~~glL~aP~sG~e~R~ 29 (74)
T PF12732_consen 2 LLGFLAGAAAGAAAGLLFAPKSGKETRE 29 (74)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 4568899999999999999864444443
No 59
>PHA01749 coat protein
Probab=78.80 E-value=9.3 Score=21.37 Aligned_cols=52 Identities=8% Similarity=0.150 Sum_probs=34.5
Q ss_pred HHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchh----hcccccHHHHHHHh
Q psy14349 22 KTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTL----SFWRGNSANILRYF 80 (91)
Q Consensus 22 ~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~----g~y~G~~~~~~~~~ 80 (91)
+++++--.+.....|..- +++.+.-+-+..++.+-|+. .+|+|+...+.|..
T Consensus 32 tilsnvs~iaqqnfqtnv-------pkftsvne~vsavltqygvtgpnraiyqgfglkvaral 87 (134)
T PHA01749 32 TILSNVSPVAQQNFQTNV-------PKFTSVNENVSAVLTQYGITGPNRAIYQGFGLKVARAL 87 (134)
T ss_pred HHHHhhHHHHHHhhhcCC-------ccchhHHHHHHHHHHHhcCCCccHHHHhhhhHHHHHHH
Confidence 334444444555566644 46777777788888888764 58999988777654
No 60
>PF00473 CRF: Corticotropin-releasing factor family; InterPro: IPR000187 Corticotropin-releasing factor (CRF), urotensin-I, urocortin and sauvagine form a family of related neuropeptides in vertebrates. The family can be grouped into 2 separate paralogous lineages, with urotensin-I, urocortin and sauvagine in one group and CRF forming the other group. Urocortin and sauvagine appear to represent orthologues of fish urotensin-I in mammals and amphibians, respectively. The peptides have a variety of physiological effects on stress and anxiety, vasoregulation, thermoregulation, growth and metabolism, metamorphosis and reproduction in various species, and are all released as preprohormones []. CRF [] is a hormone found mainly in the paraventricular nucleus of the mammalian hypothalamus that regulates the release of corticotropin (ACTH) from the pituitary gland. From here, CRF is transported to the anterior pituitary, stimulating adrenocorticotropic hormone (ACTH) release via CRF type 1 receptors, thereby activating the hypothalamo-pituitary-adrenocortical axis (HPA) and thus glucocorticoid release. CRF is evolutionary related to a number of other active peptides. Urocortin acts in vitro to stimulate the secretion of adrenocorticotropic hormone. Urotensin is found in the teleost caudal neurosecretory system and may play a role in osmoregulation and as a corticotropin-releasing factor. Urotensin-I is released from the urophysis of fish, and produces ACTH and subsequent cortisol release in vivo. The nonhormonal portion of the prohormone is thought to be the urotensin binding protein (urophysin). Sauvagine (P01144 from SWISSPROT), isolated from frog skin, has a potent hypotensive and diuretic effect.; GO: 0005179 hormone activity, 0005576 extracellular region; PDB: 3EHU_C 3EHT_B 2RMF_A 3N96_G.
Probab=69.51 E-value=4.7 Score=18.46 Aligned_cols=17 Identities=6% Similarity=0.131 Sum_probs=14.0
Q ss_pred HhhccHHHHHHHHHhcC
Q psy14349 23 TTVAPIERVKILLQIQD 39 (91)
Q Consensus 23 ~~~~P~d~ik~r~q~~~ 39 (91)
.+..|+|+++.++....
T Consensus 5 SIdl~~~vLR~~l~~~~ 21 (39)
T PF00473_consen 5 SIDLTFHVLRQRLELER 21 (39)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHH
Confidence 46789999999987754
No 61
>PRK06926 flagellar motor protein MotP; Reviewed
Probab=66.56 E-value=11 Score=24.67 Aligned_cols=49 Identities=8% Similarity=0.074 Sum_probs=25.9
Q ss_pred HHHHhhccHHHHHHHHHhcCCCccccccCCCCHHH---HHHHHHHhhchhhc
Q psy14349 20 ISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGD---CFVRIHKEQGTLSF 68 (91)
Q Consensus 20 ~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~---~~~~i~~~~G~~g~ 68 (91)
.+.++.+|++.+|.-+..-...-......+....+ -+.+..|++|+.++
T Consensus 50 ~a~lis~p~~~~~~~~k~l~~~f~~~~~~~~~~i~~l~~la~~aRk~GlLaL 101 (271)
T PRK06926 50 AALFISFSPKDLKLAPRVLKQAFQSQEDDVEELVQTFVSLSEKARREGLLSL 101 (271)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 35678999999987443321110001122333333 34556678887764
No 62
>PRK09110 flagellar motor protein MotA; Validated
Probab=65.12 E-value=7.4 Score=25.63 Aligned_cols=50 Identities=10% Similarity=0.072 Sum_probs=27.7
Q ss_pred HHHHHhhccHHHHHHHHHhcCCCcc---ccccCCCCHHHHHHH---HHHhhchhhc
Q psy14349 19 TISKTTVAPIERVKILLQIQDSSKN---IAARRYRGIGDCFVR---IHKEQGTLSF 68 (91)
Q Consensus 19 ~~~~~~~~P~d~ik~r~q~~~~~~~---~~~~~~~~~~~~~~~---i~~~~G~~g~ 68 (91)
+.+.++.+|++.+|.-...-...-. .....|....+.+.+ ..|++|+.++
T Consensus 42 lga~lv~~p~~~i~~~~k~~~~~f~~~~~~~~~~~~li~~l~~l~~~aRk~GllaL 97 (283)
T PRK09110 42 LGAFIVGNPGKAIKATLKALPKLFKGPKYKKADYMDLLALLYELLRKARQEGMMAL 97 (283)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 3466789999999976543221110 012233444444433 6678887664
No 63
>PRK06743 flagellar motor protein MotP; Reviewed
Probab=65.05 E-value=14 Score=24.02 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=25.8
Q ss_pred HHHhhccHHHHHHHHHhcCCCccccccCCCCHHH---HHHHHHHhhchhhc
Q psy14349 21 SKTTVAPIERVKILLQIQDSSKNIAARRYRGIGD---CFVRIHKEQGTLSF 68 (91)
Q Consensus 21 ~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~---~~~~i~~~~G~~g~ 68 (91)
+.++.+|++.+|.-...-...-......|....+ .+.+..|++|+.++
T Consensus 43 a~li~~p~~~i~~~~k~~~~~f~~~~~~~~~~i~~l~~la~~aRr~GlLaL 93 (254)
T PRK06743 43 TIVVAYRFGEIKKYTKSIFTVLHRREEDLEQLTDLFVDFSKKSKKHGLLSL 93 (254)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 5678999999986554322111111222333333 34456677887664
No 64
>PRK12482 flagellar motor protein MotA; Provisional
Probab=59.26 E-value=22 Score=23.57 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=26.3
Q ss_pred HHHhhccHHHHHHHHHhcCCC---ccccccCCCCH---HHHHHHHHHhhchhhc
Q psy14349 21 SKTTVAPIERVKILLQIQDSS---KNIAARRYRGI---GDCFVRIHKEQGTLSF 68 (91)
Q Consensus 21 ~~~~~~P~d~ik~r~q~~~~~---~~~~~~~~~~~---~~~~~~i~~~~G~~g~ 68 (91)
+.++.+|++.+|.-+..-... ++.....|... .-.+.+..|++|+.++
T Consensus 44 a~lis~p~~~~~~~~k~~~~~f~~~~~~~~~y~~~i~~lv~ls~~aRr~GllaL 97 (287)
T PRK12482 44 AMILGNPKSVLKEMWHQIKGVIRRKEYGVEFQRQLLLLLYELLEMVQEGGLKRL 97 (287)
T ss_pred HHHHhCCHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHHHhcCHHHH
Confidence 567899999998655332111 00011122333 3445667788887764
No 65
>COG4980 GvpP Gas vesicle protein [General function prediction only]
Probab=58.13 E-value=23 Score=20.23 Aligned_cols=30 Identities=23% Similarity=0.463 Sum_probs=22.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHH
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKIL 34 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r 34 (91)
-+++.-.+.|++.|+++.++..|=-=-.+|
T Consensus 5 ~~~l~G~liGgiiGa~aaLL~AP~sGkelR 34 (115)
T COG4980 5 KDFLFGILIGGIIGAAAALLFAPKSGKELR 34 (115)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCcccHHHH
Confidence 356667788899999999999987555555
No 66
>COG4297 Uncharacterized protein containing double-stranded beta helix domain [Function unknown]
Probab=57.98 E-value=6.5 Score=23.30 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=16.9
Q ss_pred HHHHHHHhhchhhcccccHH
Q psy14349 55 CFVRIHKEQGTLSFWRGNSA 74 (91)
Q Consensus 55 ~~~~i~~~~G~~g~y~G~~~ 74 (91)
-+.++++..||.|.|+|-..
T Consensus 36 ~~e~~~~~~gW~gsW~g~Vf 55 (163)
T COG4297 36 QVEDHFKANGWFGSWRGGVF 55 (163)
T ss_pred HHHHHHhhcCCccccccccc
Confidence 37889999999999999654
No 67
>smart00039 CRF corticotropin-releasing factor.
Probab=55.50 E-value=11 Score=17.40 Aligned_cols=17 Identities=6% Similarity=0.188 Sum_probs=13.7
Q ss_pred HhhccHHHHHHHHHhcC
Q psy14349 23 TTVAPIERVKILLQIQD 39 (91)
Q Consensus 23 ~~~~P~d~ik~r~q~~~ 39 (91)
.+..|+|+++.++....
T Consensus 6 SIdl~~~vLR~~l~~e~ 22 (40)
T smart00039 6 SIDLTFDLLRQRLELEK 22 (40)
T ss_pred ccccHHHHHHHHHHHHH
Confidence 46789999999987754
No 68
>COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only]
Probab=54.46 E-value=19 Score=25.43 Aligned_cols=25 Identities=12% Similarity=0.301 Sum_probs=18.7
Q ss_pred HHHHHHHHhhccHHHHHHHHHhcCC
Q psy14349 16 IAATISKTTVAPIERVKILLQIQDS 40 (91)
Q Consensus 16 ~ag~~~~~~~~P~d~ik~r~q~~~~ 40 (91)
++-.+...+..|+|||+.-+-....
T Consensus 264 lS~alNigLL~PleVi~Aa~~Ay~~ 288 (505)
T COG3046 264 LSFALNIGLLTPLEVIRAALKAYRE 288 (505)
T ss_pred HHHHhhccCCCHHHHHHHHHHhhcc
Confidence 3445566788999999998877654
No 69
>PRK01622 OxaA-like protein precursor; Validated
Probab=53.15 E-value=45 Score=21.59 Aligned_cols=27 Identities=7% Similarity=0.044 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhchhhcccccHHHHHH
Q psy14349 52 IGDCFVRIHKEQGTLSFWRGNSANILR 78 (91)
Q Consensus 52 ~~~~~~~i~~~~G~~g~y~G~~~~~~~ 78 (91)
.-+..++++|++|+.=+..|+.|-++.
T Consensus 119 ~~~e~~~Lyk~~gi~P~~~g~lp~liQ 145 (256)
T PRK01622 119 YQKEMMELYKSGNINPLAMGCLPLLIQ 145 (256)
T ss_pred HHHHHHHHHHHcCCCCchhhHHHHHHH
Confidence 445678999999987544488886653
No 70
>PF02096 60KD_IMP: 60Kd inner membrane protein; InterPro: IPR001708 This family of proteins is required for the insertion of integral membrane proteins into cellular membranes. Many of these integral membrane proteins are associated with respiratory chain complexes, for example a large number of members of this family play an essential role in the activity and assembly of cytochrome c oxidase. Stage III sporulation protein J (SP3J) is a probable lipoprotein, rich in basic and hydrophobic amino acids. Mutations in the protein abolish the transcription of prespore-specific genes transcribed by the sigma G form of RNA polymerase []. SP3J could be involved in a signal transduction pathway coupling gene expression in the prespore to events in the mother cell, or it may be necessary for essential metabolic interactions between the two cells []. The protein shows a high degree of similarity to Bacillus subtilis YQJG, to yeast OXA1 and also to bacterial 60 kDa inner-membrane proteins [, , , ]. ; GO: 0051205 protein insertion into membrane, 0016021 integral to membrane
Probab=51.32 E-value=30 Score=21.08 Aligned_cols=61 Identities=8% Similarity=0.208 Sum_probs=35.8
Q ss_pred HHHHHHHhhccHHHHHHHHHhcCCCc----cccccCCC----CHHHHHHHHHHhhchhhcccccHHHHHH
Q psy14349 17 AATISKTTVAPIERVKILLQIQDSSK----NIAARRYR----GIGDCFVRIHKEQGTLSFWRGNSANILR 78 (91)
Q Consensus 17 ag~~~~~~~~P~d~ik~r~q~~~~~~----~~~~~~~~----~~~~~~~~i~~~~G~~g~y~G~~~~~~~ 78 (91)
..++-.+++.|+-+-..|.+..-... ..-+.+|. ...+..++++|++|++-+ +|+.+.++.
T Consensus 10 ~ti~vR~~~~Pl~i~~~~~~~k~~~~~P~l~~i~~k~~~~~~~~~~~~~~l~k~~~~~p~-~~~~~~liq 78 (198)
T PF02096_consen 10 TTILVRLILLPLSIKQQRSSAKMQELQPELKEIQEKYKEDQQKMQQEMQKLYKKHGVNPL-KGCLPPLIQ 78 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCcH-HHHHHHHHH
Confidence 34556678889866555544321100 00112332 466778999999998644 777776653
No 71
>PF02466 Tim17: Tim17/Tim22/Tim23/Pmp24 family; InterPro: IPR003397 The membrane-embedded multi-protein complexes of mitochondria mediate the transport of nuclear-encoded proteins across and into the outer or inner mitochondrial membranes []. The TOM (translocase of the outer mitochondrial membrane) complex consists of cytosol-exposed receptors and a pore-forming core, and mediates the transport of proteins from the cytosol across and into the outer mitochondrial membrane. A novel protein complex in the outer membrane of mitochondria, called the SAM complex (sorting and assembly machinery), is involved in the biogenesis of beta-barrel proteins of the outer membrane. Two translocases of the inner mitochondrial membrane (TIM22 and TIM23 complexes) mediate protein transport at the inner membrane. The TIM23 complex (a presequence translocase) mediates the transport of presequence-containing proteins across and into the inner membrane. Tim23 and Tim17 form part of this complex. Tim23 forms a pore in the inner membrane. The role of Tim17 is not yet fully understood. The TIM22 complex (a twin-pore carrier translocase) catalyses the insertion of multi-spanning proteins that have internal targeting signals into the inner membrane. The TIM22 complex mediates the membrane insertion of multi-spanning inner-membrane proteins that have internal targeting signals, and it uses the membrane potential as an external driving force. The Tim22 subunit of the mitochondrial import inner membrane translocase is included in this family. This family also includes Pmp24, a peroxisomal membrane protein, and NADH ubiquinone dehydrogenase 1 alpha subunit 11. Pmp24 was previously known as Pmp27 [].
Probab=48.00 E-value=16 Score=20.56 Aligned_cols=21 Identities=19% Similarity=0.286 Sum_probs=16.2
Q ss_pred CCchhHHHHHHHHHHHHHHHH
Q psy14349 3 GQSDFVHDFVVGGIAATISKT 23 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~ 23 (91)
++.+.++.+++|+++|++-..
T Consensus 80 ~k~D~~N~~~aG~~aGa~~~~ 100 (128)
T PF02466_consen 80 GKDDPWNSAIAGAAAGAVLGL 100 (128)
T ss_pred cccccchhHHHHHHHHHHHHh
Confidence 456788999999999975543
No 72
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=47.55 E-value=27 Score=15.38 Aligned_cols=24 Identities=29% Similarity=0.315 Sum_probs=17.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhccHH
Q psy14349 6 DFVHDFVVGGIAATISKTTVAPIE 29 (91)
Q Consensus 6 ~~~~~~~ag~~ag~~~~~~~~P~d 29 (91)
.+|..+.+=.+||.+++.++.-++
T Consensus 9 ~~WhDLAAP~iagIi~s~iv~w~~ 32 (35)
T PF13940_consen 9 AFWHDLAAPIIAGIIASLIVGWLR 32 (35)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHH
Confidence 357778888888888887765443
No 73
>TIGR03818 MotA1 flagellar motor stator protein MotA. This model represents one family of MotA proteins which are often not identified by the "transporter, MotA/TolQ/ExbB proton channel family" model, pfam01618.
Probab=46.61 E-value=24 Score=23.26 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=26.9
Q ss_pred HHHHHhhccHHHHHHHHHhcCC---CccccccCCCCHHH---HHHHHHHhhchhhc
Q psy14349 19 TISKTTVAPIERVKILLQIQDS---SKNIAARRYRGIGD---CFVRIHKEQGTLSF 68 (91)
Q Consensus 19 ~~~~~~~~P~d~ik~r~q~~~~---~~~~~~~~~~~~~~---~~~~i~~~~G~~g~ 68 (91)
+.+.++.+|++.+|.-...-.. .+......+....+ -+.+..|.+|+.++
T Consensus 42 lga~lis~p~~~~~~~~~~~~~~f~~~~~~~~~~~~li~~l~~la~~aR~~GllaL 97 (282)
T TIGR03818 42 IGAFIIANPPKVLKETLKGLPKVFKGSKYGKADYLDLLSLLYELLRKARREGLMAI 97 (282)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 4466789999999865432111 10001123344444 34556678887764
No 74
>PRK08990 flagellar motor protein PomA; Reviewed
Probab=45.96 E-value=59 Score=21.11 Aligned_cols=49 Identities=6% Similarity=-0.028 Sum_probs=24.3
Q ss_pred HHHhhccHHHHHHHHHhcCCCccccccCCCCHHH---HHHHHHHhhchhhcc
Q psy14349 21 SKTTVAPIERVKILLQIQDSSKNIAARRYRGIGD---CFVRIHKEQGTLSFW 69 (91)
Q Consensus 21 ~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~---~~~~i~~~~G~~g~y 69 (91)
+.++.+|+.-++.-+-.-.......+..+....+ .+.+..|++|+.++=
T Consensus 45 a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~la~~aR~~GllaLE 96 (254)
T PRK08990 45 VVLMKFNLGQFFGAVKIAGKAFMFKIDKPEDLIEQIVEMADAARKGGFLALE 96 (254)
T ss_pred HHHhhccHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHhhccHhhhh
Confidence 3448899888775443221111111222333332 344567788877643
No 75
>PF02830 V4R: V4R domain; InterPro: IPR004096 Central cellular functions such as metabolism, solute transport and signal transduction are regulated, in part, via binding of small molecules by specialised domains. The 4-vinyl reductase (4VR) domain is a predicted small molecular binding domain, that may bind to hydrocarbons []. Proteins that contain this domain include a regulator of the phenol catabolic pathway and a protein involved in chlorophyll biosynthesis.; PDB: 2OSD_A 2OSO_A.
Probab=44.54 E-value=39 Score=16.55 Aligned_cols=26 Identities=23% Similarity=0.150 Sum_probs=16.9
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccHH
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPIE 29 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~d 29 (91)
...+...+.+|.++|++....--+++
T Consensus 17 ~~~p~C~~~~G~~~G~~~~~~~~~~~ 42 (62)
T PF02830_consen 17 SDEPVCWFTAGYLAGFFSALFGKEVE 42 (62)
T ss_dssp -SS---HHHHHHHHHHHHHHHSSEEE
T ss_pred CCCceEHHHHHHHHHHHHHHhCCceE
Confidence 34567789999999999877665543
No 76
>PRK09109 motC flagellar motor protein; Reviewed
Probab=43.94 E-value=30 Score=22.23 Aligned_cols=18 Identities=11% Similarity=0.034 Sum_probs=13.2
Q ss_pred HHHHHhhccHHHHHHHHH
Q psy14349 19 TISKTTVAPIERVKILLQ 36 (91)
Q Consensus 19 ~~~~~~~~P~d~ik~r~q 36 (91)
+.+.++.+|++.+|.-+.
T Consensus 44 ~~a~~i~~~~~~~~~~~~ 61 (246)
T PRK09109 44 LGAVLLQTPLAVFKRAFK 61 (246)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 335678999999986553
No 77
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.66 E-value=37 Score=20.30 Aligned_cols=29 Identities=10% Similarity=0.036 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhc
Q psy14349 10 DFVVGGIAATISKTTVAPIERVKILLQIQ 38 (91)
Q Consensus 10 ~~~ag~~ag~~~~~~~~P~d~ik~r~q~~ 38 (91)
.++++.+|...+..+=.|++.+|+|.-..
T Consensus 12 ~llsal~a~~~AQvIKv~I~~~~~rk~~~ 40 (153)
T COG1963 12 PLLSALVAILLAQVIKVLIELIRTRKLNV 40 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 36677788888899999999999986543
No 78
>KOG1431|consensus
Probab=43.25 E-value=7 Score=25.45 Aligned_cols=29 Identities=14% Similarity=0.235 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhcCC
Q psy14349 11 FVVGGIAATISKTTVAPIERVKILLQIQDS 40 (91)
Q Consensus 11 ~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~ 40 (91)
.+|+.++|+.. -.+||+|.++..+|.+..
T Consensus 61 hlAAmVGGlf~-N~~ynldF~r~Nl~indN 89 (315)
T KOG1431|consen 61 HLAAMVGGLFH-NNTYNLDFIRKNLQINDN 89 (315)
T ss_pred ehHhhhcchhh-cCCCchHHHhhcceechh
Confidence 44555555544 478999999999998764
No 79
>COG1993 PII-like signaling protein [Signal transduction mechanisms]
Probab=42.94 E-value=21 Score=20.18 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHhhchhh--cccccH
Q psy14349 50 RGIGDCFVRIHKEQGTLS--FWRGNS 73 (91)
Q Consensus 50 ~~~~~~~~~i~~~~G~~g--~y~G~~ 73 (91)
..+.+.+.+..+++|++| .|||+.
T Consensus 22 kp~~~~iverlre~Gi~GATVlRGI~ 47 (109)
T COG1993 22 KPLYEAIVERLREEGIRGATVLRGIA 47 (109)
T ss_pred eEHHHHHHHHHHHcCcCceeeeeeee
Confidence 346778888899999887 566653
No 80
>KOG1484|consensus
Probab=42.51 E-value=72 Score=21.88 Aligned_cols=42 Identities=26% Similarity=0.299 Sum_probs=28.7
Q ss_pred HHHhhccH--HHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhchhhc
Q psy14349 21 SKTTVAPI--ERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGTLSF 68 (91)
Q Consensus 21 ~~~~~~P~--d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~ 68 (91)
--..++|+ +..+.-+|..+.. .-..+-+|+++|-..+|+.++
T Consensus 251 If~sv~PL~k~s~~iLLq~tPp~------~~~~l~~cl~~Is~~~gV~~v 294 (354)
T KOG1484|consen 251 IFLSVLPLLKYSGKILLQRTPPH------LENSLKQCLRQISTLDGVTSV 294 (354)
T ss_pred HHHHHHHHHHHHHHHHHhcCChh------hhhHHHHHHHHhhccccceee
Confidence 33456677 4567777776643 224677899999999997653
No 81
>PF12594 DUF3764: Protein of unknown function (DUF3764); InterPro: IPR022240 This family of proteins is found in bacteria. Proteins in this family are typically between 89 and 101 amino acids in length.
Probab=41.65 E-value=14 Score=20.02 Aligned_cols=18 Identities=44% Similarity=0.625 Sum_probs=14.5
Q ss_pred HHHHHhhchhhcccccHH
Q psy14349 57 VRIHKEQGTLSFWRGNSA 74 (91)
Q Consensus 57 ~~i~~~~G~~g~y~G~~~ 74 (91)
..+.++.|+..||||...
T Consensus 27 ~~~~~e~gIk~lyrGvsk 44 (86)
T PF12594_consen 27 QAMHKEFGIKSLYRGVSK 44 (86)
T ss_pred HHHHHhcCCeEEEEeccc
Confidence 456678899999999763
No 82
>KOG0682|consensus
Probab=39.24 E-value=66 Score=23.16 Aligned_cols=32 Identities=19% Similarity=0.354 Sum_probs=22.1
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCC
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQDS 40 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~ 40 (91)
.++|...+.|.++++++.... -+|.|++.+..
T Consensus 309 v~pWaAiviG~va~~~~~~~~----kL~~~lkvDDp 340 (500)
T KOG0682|consen 309 VEPWAAIVIGAVAGLVCNAAN----KLKERLKVDDP 340 (500)
T ss_pred cCcHHHHHHhHHHHHHHHHHH----HHHHHhcCCcH
Confidence 456778888888887665544 34777777654
No 83
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=38.66 E-value=15 Score=20.39 Aligned_cols=20 Identities=30% Similarity=0.599 Sum_probs=15.6
Q ss_pred HHHHHHhhchhhc----ccccHHH
Q psy14349 56 FVRIHKEQGTLSF----WRGNSAN 75 (91)
Q Consensus 56 ~~~i~~~~G~~g~----y~G~~~~ 75 (91)
.-.++...|+.|| |||.+|.
T Consensus 19 aiN~mad~GiTGFfl~eYrGvsPd 42 (110)
T COG4075 19 AINIMADAGITGFFLHEYRGVSPD 42 (110)
T ss_pred HHHHHHhcCcceEEEEEecCcChh
Confidence 3457889999998 5898885
No 84
>PTZ00236 mitochondrial import inner membrane translocase subunit tim17; Provisional
Probab=37.17 E-value=95 Score=18.90 Aligned_cols=25 Identities=8% Similarity=-0.041 Sum_probs=15.7
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccH
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPI 28 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~ 28 (91)
...+|+..++|+++|.+-..-.-|-
T Consensus 86 K~D~~Nsi~AG~~TGa~l~~r~G~~ 110 (164)
T PTZ00236 86 KEDHWNAIASGFFTGGVLAIRGGWR 110 (164)
T ss_pred cCchHHHHHHHHHHHHHHHHhcChH
Confidence 4556788888888777654433333
No 85
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=36.41 E-value=60 Score=16.14 Aligned_cols=22 Identities=14% Similarity=0.431 Sum_probs=16.5
Q ss_pred HHHHHHHhhccHHHHHHHHHhc
Q psy14349 17 AATISKTTVAPIERVKILLQIQ 38 (91)
Q Consensus 17 ag~~~~~~~~P~d~ik~r~q~~ 38 (91)
-|.+...-.-|+|.|..-+.+-
T Consensus 3 ~gMLtN~gsl~l~RIh~mLkmf 24 (60)
T PF08672_consen 3 VGMLTNLGSLPLDRIHSMLKMF 24 (60)
T ss_dssp HHHHHHH-SEEHHHHHHHHHHH
T ss_pred hHHhhcCCCCCHHHHHHHHHhc
Confidence 4556666678999999988776
No 86
>COG3472 Uncharacterized conserved protein [Function unknown]
Probab=35.71 E-value=18 Score=24.49 Aligned_cols=29 Identities=24% Similarity=0.402 Sum_probs=20.7
Q ss_pred ccCCCCHHHHHHHHHHhhchhhcccccHH
Q psy14349 46 ARRYRGIGDCFVRIHKEQGTLSFWRGNSA 74 (91)
Q Consensus 46 ~~~~~~~~~~~~~i~~~~G~~g~y~G~~~ 74 (91)
..++.+.++.+..++..+|..-++.|-.-
T Consensus 178 k~~~sg~ykg~~aLl~~~~p~d~~tg~~i 206 (342)
T COG3472 178 KRSTSGVYKGFFALLARNGPLDFETGSEI 206 (342)
T ss_pred hccCchHHHHHHHHHhccCCccccchhhh
Confidence 35667777888788888887777776443
No 87
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=35.42 E-value=72 Score=17.53 Aligned_cols=24 Identities=8% Similarity=0.002 Sum_probs=16.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhc
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVA 26 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~ 26 (91)
++.-++.+++.|.+.|+++..++.
T Consensus 33 ~K~iPlIs~viGilLG~~~~~~~~ 56 (93)
T PF06946_consen 33 NKWIPLISVVIGILLGAAAYPLTG 56 (93)
T ss_pred cchhhHHHHHHHHHHHHHhhhcCC
Confidence 344566777788888877766654
No 88
>PRK08456 flagellar motor protein MotA; Validated
Probab=35.38 E-value=77 Score=20.54 Aligned_cols=16 Identities=19% Similarity=0.108 Sum_probs=12.3
Q ss_pred HHHHhhccHHHHHHHH
Q psy14349 20 ISKTTVAPIERVKILL 35 (91)
Q Consensus 20 ~~~~~~~P~d~ik~r~ 35 (91)
.+.++.+|++.+|.-.
T Consensus 45 ~a~~i~~~~~~~~~~~ 60 (257)
T PRK08456 45 FAAMTATHKKYVKAAY 60 (257)
T ss_pred HHHHHhCCHHHHHHHH
Confidence 3567899999998654
No 89
>PF10126 Nit_Regul_Hom: Uncharacterized protein, homolog of nitrogen regulatory protein PII; InterPro: IPR019296 This family consists of various hypothetical archaeal proteins. It includes a putative nitrogen regulatory protein PII homolog.
Probab=34.31 E-value=19 Score=20.30 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=15.3
Q ss_pred HHHHhhchhhc----ccccHHHHH
Q psy14349 58 RIHKEQGTLSF----WRGNSANIL 77 (91)
Q Consensus 58 ~i~~~~G~~g~----y~G~~~~~~ 77 (91)
.++.+.|+.|| |||.+|.-.
T Consensus 21 NaLte~GITGFyl~eYkGmSP~~w 44 (110)
T PF10126_consen 21 NALTEGGITGFYLHEYKGMSPQDW 44 (110)
T ss_pred HHHHhcCccEEEeEeecCCChHHh
Confidence 46778999998 589988543
No 90
>PF02411 MerT: MerT mercuric transport protein; InterPro: IPR003457 MerT is an mercuric transport integral membrane protein and is responsible for transport of the Hg2+ iron from periplasmic MerP (also part of the transport system) to mercuric reductase (MerA).; GO: 0015097 mercury ion transmembrane transporter activity, 0015694 mercury ion transport, 0016020 membrane
Probab=34.24 E-value=69 Score=18.24 Aligned_cols=31 Identities=16% Similarity=0.239 Sum_probs=15.3
Q ss_pred CCCCchhHHHHHHHHHHHHHHHH-hhccHHHH
Q psy14349 1 MGGQSDFVHDFVVGGIAATISKT-TVAPIERV 31 (91)
Q Consensus 1 ~~~~~~~~~~~~ag~~ag~~~~~-~~~P~d~i 31 (91)
|+++.+.-...++|.++++.++. +.-|+-.+
T Consensus 1 m~~~~~~~~~l~~g~laAv~aS~CCi~Pllll 32 (116)
T PF02411_consen 1 MSQPKTSNGSLLGGVLAAVLASLCCIGPLLLL 32 (116)
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444455566666554443 44565433
No 91
>KOG1746|consensus
Probab=33.63 E-value=94 Score=17.58 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCC
Q psy14349 7 FVHDFVVGGIAATISKTTVAPIERVKILLQIQDSS 41 (91)
Q Consensus 7 ~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~~~ 41 (91)
+.+++++|.++.+ ++.+. .+--|||...+.
T Consensus 54 PFNSFLSGfIscV-g~fVL----avclR~q~n~qn 83 (115)
T KOG1746|consen 54 PFNSFLSGFISCV-GQFVL----AVCLRIQVNQQN 83 (115)
T ss_pred ChHHHHHHHHHHH-HHHHH----HHHHHHHhcccc
Confidence 4567777777643 33222 456799997764
No 92
>PF06043 Reo_P9: Reovirus P9-like family; InterPro: IPR009268 These proteins of unknown function are found in Rice black streaked dwarf virus (RBSDV) and other viruses.; PDB: 3VJJ_B.
Probab=33.12 E-value=68 Score=21.48 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=20.5
Q ss_pred HHHHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhhch
Q psy14349 19 TISKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQGT 65 (91)
Q Consensus 19 ~~~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~ 65 (91)
.++++--+|+|.+|..+++.- +....+.+.++++|+
T Consensus 237 ~latF~nypf~~lR~~L~s~i-----------s~p~~i~q~i~k~GL 272 (333)
T PF06043_consen 237 QLATFDNYPFDLLRFQLSSLI-----------SVPNSILQRIAKDGL 272 (333)
T ss_dssp HHHH-TT-BHHHHHHH-SS----------------HHHHHHHHHS-S
T ss_pred eeecCCCCcHHHHHHHhhhhc-----------CChHHHHHHHHhcCc
Confidence 356667799999988776643 344667778888874
No 93
>PF08887 GAD-like: GAD-like domain; InterPro: IPR014983 This domain is functionally uncharacterised, but it appears to be distantly related to the GAD domain IPR004115 from INTERPRO.
Probab=33.04 E-value=37 Score=19.10 Aligned_cols=26 Identities=27% Similarity=0.418 Sum_probs=19.9
Q ss_pred CCCC-HHHHHHHHHHhhchhhcccccH
Q psy14349 48 RYRG-IGDCFVRIHKEQGTLSFWRGNS 73 (91)
Q Consensus 48 ~~~~-~~~~~~~i~~~~G~~g~y~G~~ 73 (91)
+|++ +.+.+-+.|++.|+.++..|+.
T Consensus 27 kyk~~lP~~Ll~~W~~~G~g~~~dG~f 53 (109)
T PF08887_consen 27 KYKGKLPDELLEYWKEYGFGGYGDGLF 53 (109)
T ss_pred HhcCCCcHHHHHHHHHcCCchhcCcEE
Confidence 4443 4588999999999998887753
No 94
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=31.37 E-value=1.5e+02 Score=19.37 Aligned_cols=26 Identities=15% Similarity=0.006 Sum_probs=16.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccH
Q psy14349 3 GQSDFVHDFVVGGIAATISKTTVAPI 28 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~~~~P~ 28 (91)
.+.+.++.+++++++++.+..+..|.
T Consensus 29 ~~~~~~Rll~~A~~Gal~~~~~~~p~ 54 (293)
T PF03419_consen 29 RRASRWRLLLGAAIGALYSLLIFFPP 54 (293)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence 44566676777777776666666673
No 95
>PF00440 TetR_N: Bacterial regulatory proteins, tetR family; InterPro: IPR001647 This entry represents a DNA-binding domain with a helix-turn-helix (HTH) structure that is found in several bacterial and archaeal transcriptional regulators, such as TetR, the tetracycline resistance repressor. Numerous other transcriptional regulatory proteins also contain HTH-type DNA-binding domains, and can be grouped into subfamiles based on sequence similarity. The domain represented by this entry is found in a subfamily of proteins that includes the transcriptional regulators TetR, TetC, AcrR, BetI, Bm3R1, EnvR, QacR, MtrR, TcmR, Ttk, YbiH, and YhgD [, , ]. Many of these proteins function as repressors that control the level of susceptibility to hydrophobic antibiotics and detergents. They all have similar molecular weights, ranging from 21 to 25 kDa. The helix-turn-helix motif is located in the initial third of the protein. The 3D structure of the homodimeric TetR protein complexed with 7-chloro-tetracycline-magnesium has been determined to 2.1 A resolution []. TetR folds into ten alpha-helices with connecting turns and loops. The three N-terminal alpha-helices of the repressor form the DNA-binding domain: this structural motif encompasses an HTH fold with an inverse orientation compared with that of other DNA-binding proteins.; GO: 0003677 DNA binding; PDB: 3NPI_B 3IUV_A 3CCY_A 2JK3_A 2FX0_A 2JJ7_A 2WV1_B 3BTI_D 3BR6_E 3BR5_A ....
Probab=30.39 E-value=56 Score=14.83 Aligned_cols=15 Identities=13% Similarity=0.204 Sum_probs=10.2
Q ss_pred HHHHHHHHHhhchhh
Q psy14349 53 GDCFVRIHKEQGTLS 67 (91)
Q Consensus 53 ~~~~~~i~~~~G~~g 67 (91)
+++..+++.++|+.+
T Consensus 2 l~aa~~l~~~~G~~~ 16 (47)
T PF00440_consen 2 LEAALELFAEKGYEA 16 (47)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCHHh
Confidence 456677777787654
No 96
>PF08300 HCV_NS5a_1a: Hepatitis C virus non-structural 5a zinc finger domain; InterPro: IPR013192 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a zinc finger motif found in the non-structural 5a protein (NS5a) in Hepatitis C virus. The molecular function of NS5a is uncertain, but it is phosphorylated when expressed in mammalian cells. It is thought to interact with the dsRNA dependent (interferon inducible) kinase PKR, P19525 from SWISSPROT [, ]. This region corresponds to the N-terminal zinc binding domain (1a) []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003968 RNA-directed RNA polymerase activity, 0004252 serine-type endopeptidase activity, 0008270 zinc ion binding, 0017111 nucleoside-triphosphatase activity, 0006355 regulation of transcription, DNA-dependent, 0006915 apoptosis, 0030683 evasion by virus of host immune response, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane; PDB: 1ZH1_B 3FQM_A 3FQQ_B.
Probab=29.47 E-value=18 Score=18.23 Aligned_cols=11 Identities=36% Similarity=1.030 Sum_probs=5.0
Q ss_pred hhchhhccccc
Q psy14349 62 EQGTLSFWRGN 72 (91)
Q Consensus 62 ~~G~~g~y~G~ 72 (91)
++|++|-|+|-
T Consensus 7 qrGy~G~W~Gd 17 (62)
T PF08300_consen 7 QRGYKGVWRGD 17 (62)
T ss_dssp ---B-SEEES-
T ss_pred CCCCCcEEcCC
Confidence 56888888874
No 97
>TIGR03592 yidC_oxa1_cterm membrane protein insertase, YidC/Oxa1 family, C-terminal domain. This model describes full-length from some species, and the C-terminal region only from other species, of the YidC/Oxa1 family of proteins. This domain appears to be univeral among bacteria (although absent from Archaea). The well-characterized YidC protein from Escherichia coli and its close homologs contain a large N-terminal periplasmic domain in addition to the region modeled here.
Probab=29.03 E-value=1.2e+02 Score=18.31 Aligned_cols=60 Identities=12% Similarity=0.151 Sum_probs=32.4
Q ss_pred HHHHHHHhhccHHHHHHHHHhcCC----CccccccCCC----CHHHHHHHHHHhhchhhcccccHHHHH
Q psy14349 17 AATISKTTVAPIERVKILLQIQDS----SKNIAARRYR----GIGDCFVRIHKEQGTLSFWRGNSANIL 77 (91)
Q Consensus 17 ag~~~~~~~~P~d~ik~r~q~~~~----~~~~~~~~~~----~~~~~~~~i~~~~G~~g~y~G~~~~~~ 77 (91)
..++..+++.|+-+-..|-+..-. .-.+-..+|+ ..-+..++++|++|+. .++|+.+.++
T Consensus 9 ~ti~vR~~~~Pl~~~~~~~~~km~~i~P~~~~i~~k~k~~~~~~~~e~~~l~k~~~~~-p~~~~lp~li 76 (181)
T TIGR03592 9 LTIIVRLLLLPLTLKQYKSMRKMQELQPKLKEIQEKYKDDPQKLQQEMMKLYKEEGVN-PLGGCLPLLI 76 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhHHHHHHHHHHHHHHhCCC-cHHHHHHHHH
Confidence 345556778888664444322110 0000011222 3456788999999987 4577777654
No 98
>COG5499 Predicted transcription regulator containing HTH domain [Transcription]
Probab=28.34 E-value=98 Score=17.66 Aligned_cols=15 Identities=20% Similarity=0.430 Sum_probs=12.3
Q ss_pred ccHHHHHHHHHhcCC
Q psy14349 26 APIERVKILLQIQDS 40 (91)
Q Consensus 26 ~P~d~ik~r~q~~~~ 40 (91)
-|+++|++.|+.-+.
T Consensus 60 ~pve~I~t~Md~~gl 74 (120)
T COG5499 60 DPVEVIRTLMDQYGL 74 (120)
T ss_pred CHHHHHHHHHHHhCC
Confidence 478999999988664
No 99
>PF10399 UCR_Fe-S_N: Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; InterPro: IPR019470 This entry represents the TAT-signal region found in the iron-sulphur subunit of Ubiquinol-cytochrome C reductase (also known as the cytochrome bc1 complex). This enzymex is an oligomeric membrane protein complex that is a component of respiratory and photosynthetic electron transfer chains. It couples the transfer of electrons from ubiquinol to cytochrome c with the generation of a protein gradient across the membrane []. This entry is associated with IPR017941 from INTERPRO, IPR004192 from INTERPRO and IPR015248 from INTERPRO. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0055114 oxidation-reduction process; PDB: 1ZRT_R 2QJY_R 2FYN_L 2QJK_O 2QJP_I 2YIU_F.
Probab=28.10 E-value=73 Score=14.60 Aligned_cols=18 Identities=11% Similarity=0.196 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHhhccH
Q psy14349 11 FVVGGIAATISKTTVAPI 28 (91)
Q Consensus 11 ~~ag~~ag~~~~~~~~P~ 28 (91)
...++++++-+..+..||
T Consensus 17 ~at~~~gavG~~~~a~Pf 34 (41)
T PF10399_consen 17 IATSAVGAVGAAAAAWPF 34 (41)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345555555555666676
No 100
>PF08195 TRI9: TRI9 protein; InterPro: IPR013265 This entry contains putative genes, of 129 bp, from the Trichothecene gene cluster of Fusarium sporotrichioides and Gibberella zeae (Fusarium graminearum) that encode a predicted protein of 43 amino acids whose function is unknown [, ].
Probab=27.86 E-value=71 Score=14.40 Aligned_cols=22 Identities=14% Similarity=0.292 Sum_probs=12.1
Q ss_pred CCCchhHHHHHHHHHHHHHHHH
Q psy14349 2 GGQSDFVHDFVVGGIAATISKT 23 (91)
Q Consensus 2 ~~~~~~~~~~~ag~~ag~~~~~ 23 (91)
+.+.+++..+.-++++.+++.+
T Consensus 14 dp~vswle~~aysgvsaalcat 35 (43)
T PF08195_consen 14 DPDVSWLEVCAYSGVSAALCAT 35 (43)
T ss_pred CCCccHHHhhHhcchhHHHHHH
Confidence 4455666666555555555443
No 101
>PF14514 TetR_C_9: Transcriptional regulator, TetR, C-terminal; PDB: 2QTQ_D 2RHA_A.
Probab=27.76 E-value=1.3e+02 Score=17.29 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHhhchhhcccccHHHHHHHhhhhhhhhh
Q psy14349 51 GIGDCFVRIHKEQGTLSFWRGNSANILRYFPAQALNFE 88 (91)
Q Consensus 51 ~~~~~~~~i~~~~G~~g~y~G~~~~~~~~~~~~~i~~~ 88 (91)
.+.+.++.|+++.=-.|.||.+-|..+.....+...+.
T Consensus 51 P~~~~l~~il~~GvaaG~fR~vDP~~~y~si~gl~~~~ 88 (129)
T PF14514_consen 51 PLVDALRRILEEGVAAGVFRPVDPRLFYISIIGLCYFY 88 (129)
T ss_dssp HHHHHHHHHHHHHHHTTSB-S--HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHHH
Confidence 45678888886555579999988888877666555543
No 102
>COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily [General function prediction only]
Probab=27.38 E-value=1.3e+02 Score=17.43 Aligned_cols=19 Identities=5% Similarity=0.081 Sum_probs=14.9
Q ss_pred HHhhccHHHHHHHHHhcCC
Q psy14349 22 KTTVAPIERVKILLQIQDS 40 (91)
Q Consensus 22 ~~~~~P~d~ik~r~q~~~~ 40 (91)
..+...+|+||.|+|.+-.
T Consensus 17 lll~LS~~vVrlR~k~rVa 35 (131)
T COG3788 17 LLLKLSFDVVRLRMKYRVA 35 (131)
T ss_pred HHHHHHHHHHHHHHHhhhe
Confidence 3466789999999998754
No 103
>PF06837 Fijivirus_P9-2: Fijivirus P9-2 protein; InterPro: IPR009650 This family consists of several Fijivirus specific P9-2 proteins from Rice black streaked dwarf virus (RBSDV) and Fiji disease virus. The function of this family is unknown.
Probab=26.89 E-value=45 Score=20.86 Aligned_cols=14 Identities=29% Similarity=0.347 Sum_probs=12.2
Q ss_pred hhccHHHHHHHHHh
Q psy14349 24 TVAPIERVKILLQI 37 (91)
Q Consensus 24 ~~~P~d~ik~r~q~ 37 (91)
.-+|+++.|+|+|.
T Consensus 14 f~cPf~laKiq~~~ 27 (214)
T PF06837_consen 14 FNCPFELAKIQIES 27 (214)
T ss_pred eccchHHHHHHHHh
Confidence 35799999999998
No 104
>TIGR00980 3a0801so1tim17 mitochondrial import inner membrane translocase subunit tim17.
Probab=26.78 E-value=1.4e+02 Score=18.24 Aligned_cols=21 Identities=10% Similarity=0.102 Sum_probs=13.7
Q ss_pred CCchhHHHHHHHHHHHHHHHH
Q psy14349 3 GQSDFVHDFVVGGIAATISKT 23 (91)
Q Consensus 3 ~~~~~~~~~~ag~~ag~~~~~ 23 (91)
++..+|+..++|+++|.+-..
T Consensus 83 ~KeD~~NsiiAG~~TGa~l~~ 103 (170)
T TIGR00980 83 KKEDPWNSIISGFLTGAALAV 103 (170)
T ss_pred cccchHHHHHHHHHHHHHHHh
Confidence 345667777777777765444
No 105
>PF10295 DUF2406: Uncharacterised protein (DUF2406); InterPro: IPR018809 This entry represents a family of small proteins conserved in fungi. The function is not known.
Probab=25.07 E-value=37 Score=17.56 Aligned_cols=7 Identities=14% Similarity=0.805 Sum_probs=5.1
Q ss_pred cHHHHHH
Q psy14349 27 PIERVKI 33 (91)
Q Consensus 27 P~d~ik~ 33 (91)
|||+||.
T Consensus 56 PLDTIRs 62 (69)
T PF10295_consen 56 PLDTIRS 62 (69)
T ss_pred chHHHHH
Confidence 7787764
No 106
>PF12156 ATPase-cat_bd: Putative metal-binding domain of cation transport ATPase; InterPro: IPR021993 This domain is found in bacteria, and is approximately 90 amino acids in length. It is found associated with PF00403 from PFAM, PF00122 from PFAM, PF00702 from PFAM. The cysteine-rich nature and composition suggest this might be a cation-binding domain; most members are annotated as being cation transport ATPases.
Probab=24.90 E-value=52 Score=17.60 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhhchhhcccc
Q psy14349 52 IGDCFVRIHKEQGTLSFWRG 71 (91)
Q Consensus 52 ~~~~~~~i~~~~G~~g~y~G 71 (91)
=-+.+..++.+.|+..||+=
T Consensus 31 GC~~V~~~i~~~gL~~yY~~ 50 (88)
T PF12156_consen 31 GCQAVYQLIHENGLESYYQK 50 (88)
T ss_pred HHHHHHHHHHHcchHHHHhc
Confidence 34667888999999999864
No 107
>smart00263 LYZ1 Alpha-lactalbumin / lysozyme C.
Probab=24.82 E-value=62 Score=18.80 Aligned_cols=16 Identities=25% Similarity=0.297 Sum_probs=13.2
Q ss_pred HHHHHHHHHHhhchhh
Q psy14349 52 IGDCFVRIHKEQGTLS 67 (91)
Q Consensus 52 ~~~~~~~i~~~~G~~g 67 (91)
...|.++|++++|+..
T Consensus 91 dv~CAk~I~~~~G~~a 106 (127)
T smart00263 91 DVKCAKKIVSDQGIDA 106 (127)
T ss_pred HHHHHHHHHHHcCchH
Confidence 3689999999998764
No 108
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=24.20 E-value=1.9e+02 Score=18.01 Aligned_cols=19 Identities=26% Similarity=0.146 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHHHHHHhh
Q psy14349 7 FVHDFVVGGIAATISKTTV 25 (91)
Q Consensus 7 ~~~~~~ag~~ag~~~~~~~ 25 (91)
.+..-+++.+|+.++..+.
T Consensus 33 vl~~gla~~iAga~SMa~G 51 (213)
T PF01988_consen 33 VLLAGLAGLIAGAISMAVG 51 (213)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344455555555554444
No 109
>PF02873 MurB_C: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; InterPro: IPR011601 This entry represents a C-terminal conserved region of UDP-N-acetylenolpyruvoylglucosamine reductase 1.1.1.158 from EC, which is also called UDP-N-acetylmuramate dehydrogenase. It is a part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide, which is a precursor of bacterial peptidoglycan. ; GO: 0008762 UDP-N-acetylmuramate dehydrogenase activity, 0055114 oxidation-reduction process; PDB: 1MBB_A 2Q85_A 2MBR_A 1UXY_A 1MBT_A 1HSK_A 2GQU_A 2GQT_A 3I99_A 3TX1_A.
Probab=24.07 E-value=83 Score=17.51 Aligned_cols=43 Identities=14% Similarity=0.013 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCCCccccccCCCCHHH---HHHHHHHhhchhhcccc
Q psy14349 29 ERVKILLQIQDSSKNIAARRYRGIGD---CFVRIHKEQGTLSFWRG 71 (91)
Q Consensus 29 d~ik~r~q~~~~~~~~~~~~~~~~~~---~~~~i~~~~G~~g~y~G 71 (91)
+..+.|.+.++....+...-|++... ..-+++.+=|++|+-.|
T Consensus 10 ~~~~~R~~~qP~~~~saGS~FkNP~~~~~~Ag~LIe~aGlKG~~iG 55 (105)
T PF02873_consen 10 EIRRKRKLKQPLELPSAGSVFKNPPGDEKSAGWLIEQAGLKGFRIG 55 (105)
T ss_dssp HHHHHHHCHSTTTSCEEEESB---TTSHH-HHHHHHHTT-TT-EET
T ss_pred HHHHHhCCCCCCCCCCcceeeeCCCcchhhHHHHHHHcCCCCCeeC
Confidence 45556666666544444444544432 46778888899887655
No 110
>COG1719 Predicted hydrocarbon binding protein (contains V4R domain) [General function prediction only]
Probab=23.23 E-value=7.6 Score=23.22 Aligned_cols=35 Identities=14% Similarity=0.060 Sum_probs=28.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcC
Q psy14349 5 SDFVHDFVVGGIAATISKTTVAPIERVKILLQIQD 39 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~~~~~P~d~ik~r~q~~~ 39 (91)
..+...+-+|.+||.+....--|.++.-|+.|.++
T Consensus 111 ~ePvC~~~aG~iag~l~~~~~k~~~v~Et~C~~~G 145 (158)
T COG1719 111 GEPVCHLEAGFIAGFLEEILGKKVEVEETECAAEG 145 (158)
T ss_pred CCcchhHHhhHHHHHHHHHhCCCeEEEEEEEeecC
Confidence 34678899999999999999888888888777544
No 111
>PF05415 Peptidase_C36: Beet necrotic yellow vein furovirus-type papain-like endopeptidase; InterPro: IPR008746 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases correspond to MEROPS peptidase family C36 (clan CA). The type example is beet necrotic yellow vein furovirus-type papain-like endopeptidase (beet necrotic yellow vein virus), which is involved in processing the viral polyprotein.
Probab=23.20 E-value=1e+02 Score=16.91 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=14.8
Q ss_pred HHHhhccHHHHHHHHHhcC
Q psy14349 21 SKTTVAPIERVKILLQIQD 39 (91)
Q Consensus 21 ~~~~~~P~d~ik~r~q~~~ 39 (91)
+..+..-+|+++..||...
T Consensus 15 s~~L~~T~e~l~~~M~An~ 33 (104)
T PF05415_consen 15 SECLGVTLEKLDNLMQANV 33 (104)
T ss_pred HHHhcchHHHHHHHHHhhH
Confidence 4445567999999999974
No 112
>COG0650 HyfC Formate hydrogenlyase subunit 4 [Energy production and conversion]
Probab=22.95 E-value=2.5e+02 Score=19.03 Aligned_cols=38 Identities=13% Similarity=0.041 Sum_probs=24.1
Q ss_pred HHHhhccHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHhh
Q psy14349 21 SKTTVAPIERVKILLQIQDSSKNIAARRYRGIGDCFVRIHKEQ 63 (91)
Q Consensus 21 ~~~~~~P~d~ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~ 63 (91)
+....-=.+.+|.|+|-...+ +-++..+|.+|-..||+
T Consensus 21 ~pl~~GI~RKv~ARiq~R~GP-----pi~Qp~~d~lKll~Ke~ 58 (309)
T COG0650 21 APLLSGITRKVRARIQRRIGP-----PILQPYYDTLKLLGKET 58 (309)
T ss_pred HHHHHhHHHHHHHHHhcCCCC-----CcchHHHHHHHHhcccc
Confidence 333333446799999987754 34556777777666655
No 113
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=22.12 E-value=30 Score=17.65 Aligned_cols=20 Identities=10% Similarity=0.308 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHhhc
Q psy14349 7 FVHDFVVGGIAATISKTTVA 26 (91)
Q Consensus 7 ~~~~~~ag~~ag~~~~~~~~ 26 (91)
...-.++|+++|++..++.-
T Consensus 10 vlaavIaG~Vvgll~ailLI 29 (64)
T PF01034_consen 10 VLAAVIAGGVVGLLFAILLI 29 (64)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666655543
No 114
>PF14074 DUF4257: Protein of unknown function (DUF4257)
Probab=22.10 E-value=1.4e+02 Score=16.06 Aligned_cols=23 Identities=30% Similarity=0.595 Sum_probs=17.5
Q ss_pred chhHHHHHHHHHHHHHHH-Hhhcc
Q psy14349 5 SDFVHDFVVGGIAATISK-TTVAP 27 (91)
Q Consensus 5 ~~~~~~~~ag~~ag~~~~-~~~~P 27 (91)
+.++.+++.|.+|+.++. .+..|
T Consensus 36 lGF~~d~~vG~~AaiL~v~~~~~~ 59 (82)
T PF14074_consen 36 LGFLEDMFVGSLAAILAVTVSSDP 59 (82)
T ss_pred ecHHHHHHHHHHHHHHhheeccCc
Confidence 457888999999998887 44444
No 115
>PF08525 OapA_N: Opacity-associated protein A N-terminal motif; InterPro: IPR013731 This domain is found in the Haemophilus influenzae opacity-associated protein (OapA). It is required for efficient nasopharyngeal mucosal colonisation, and its expression is associated with a distinctive transparent colony phenotype. OapA is thought to be a secreted protein, and its expression exhibits high-frequency phase variation [, ]. This motif occurs at the N terminus of these proteins. It contains a conserved histidine followed by a run of hydrophobic residues. Many of the proteins in this entry are unassigned peptidases belonging to MEROPS peptidase family M23B.
Probab=21.85 E-value=85 Score=13.20 Aligned_cols=25 Identities=12% Similarity=0.041 Sum_probs=14.6
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccH
Q psy14349 4 QSDFVHDFVVGGIAATISKTTVAPI 28 (91)
Q Consensus 4 ~~~~~~~~~ag~~ag~~~~~~~~P~ 28 (91)
.++....-..++++.++...+..|.
T Consensus 5 ~LP~~Hr~~l~~l~~v~l~ll~~Ps 29 (30)
T PF08525_consen 5 PLPKLHRRALIALSAVVLVLLLWPS 29 (30)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhccC
Confidence 4455555556666666665666664
No 116
>PF13467 RHH_4: Ribbon-helix-helix domain; PDB: 3KK4_C.
Probab=20.24 E-value=1.1e+02 Score=15.63 Aligned_cols=17 Identities=18% Similarity=0.206 Sum_probs=13.2
Q ss_pred CCHHHHHHHHHHhhchh
Q psy14349 50 RGIGDCFVRIHKEQGTL 66 (91)
Q Consensus 50 ~~~~~~~~~i~~~~G~~ 66 (91)
+.+|+++.+|.+++|..
T Consensus 20 ~~FW~~L~eiA~~~g~s 36 (67)
T PF13467_consen 20 PAFWDALEEIAAREGLS 36 (67)
T ss_dssp HHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 35899999999999853
Done!