Query psy14358
Match_columns 381
No_of_seqs 234 out of 1241
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 17:50:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14358.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14358hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 4.1E-26 1.4E-30 219.8 16.5 195 81-294 9-217 (280)
2 1xhb_A Polypeptide N-acetylgal 93.3 1.8 6.3E-05 42.9 15.4 190 86-286 30-250 (472)
3 1qg8_A Protein (spore coat pol 92.6 3 0.0001 37.1 14.4 182 87-280 3-201 (255)
4 4fix_A UDP-galactofuranosyl tr 89.8 4.2 0.00014 42.9 14.1 192 86-286 181-409 (657)
5 2d7i_A Polypeptide N-acetylgal 88.8 5.9 0.0002 40.7 14.2 190 86-286 113-330 (570)
6 2ffu_A Ppgalnact-2, polypeptid 85.8 9.7 0.00033 38.0 13.4 186 86-286 67-282 (501)
7 2z86_A Chondroitin synthase; G 75.8 31 0.0011 35.1 13.3 182 86-285 376-563 (625)
8 3bcv_A Putative glycosyltransf 74.2 36 0.0012 29.3 11.7 190 86-286 6-217 (240)
9 2z86_A Chondroitin synthase; G 70.8 40 0.0014 34.4 12.6 191 86-286 94-322 (625)
10 4hg6_A Cellulose synthase subu 66.7 1.2E+02 0.004 32.4 15.7 125 153-286 225-360 (802)
11 2l82_A Designed protein OR32; 44.2 32 0.0011 28.1 4.9 51 90-140 54-106 (162)
12 2c0n_A A197; thermophil protei 40.3 2E+02 0.0069 25.7 10.9 142 113-271 2-154 (203)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.94 E-value=4.1e-26 Score=219.85 Aligned_cols=195 Identities=15% Similarity=0.138 Sum_probs=135.3
Q ss_pred CCCCCcEEEEEECCCC-CHHHHHHHHHHhccC--ceEEEEecCCChhhHHHHHHHHhhCCCEEEecccC--CCCchhHHH
Q psy14358 81 PCLDTVYLVLIHSAPY-NYDKRRLIRNTWGTR--VSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWD--SYRNLTYKH 155 (381)
Q Consensus 81 ~C~~~~Lli~V~S~p~-~~~rR~aIR~TWg~~--v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~D--sY~NLt~Kt 155 (381)
.|..+.++|+|+|+++ +.+||.+||+||++. ...+|+.+..+..++. . ..+++++.++.+ ++.+++.|+
T Consensus 9 ~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~l~~----~--~~~~~~~~~~~~~~~~~~l~~K~ 82 (280)
T 2j0a_A 9 ELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQE----R--LGPHLVVTQCSAEHSHPALSCKM 82 (280)
T ss_dssp CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHHHHH----H--HGGGEEECCC-------CCCHHH
T ss_pred CCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCcccccc----c--ccccceeccccccccccchHHHH
Confidence 4555589999999997 557889999999993 3333344433444322 1 245788887754 677899999
Q ss_pred HHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCCCC
Q psy14358 156 TMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHFYP 235 (381)
Q Consensus 156 l~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~yP 235 (381)
...+++.. +++++|++|+|||+||+++||+++|...++ .+++|+|.. .. ..++|. ++++|.+.++...|+
T Consensus 83 ~~~~~~~l--~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~---~~~~YiG~~-~~-~~~~~~---~~~~~~~~~~~~~~~ 152 (280)
T 2j0a_A 83 AAEFDAFL--VSGLRWFCHVDDDNYVNPKALLQLLKTFPQ---DRDVYVGKP-SL-NRPIHA---SELQSKQRTKLVRFW 152 (280)
T ss_dssp HHHHHHHH--HHTCSEEEEEETTEEECHHHHHHHHTTSCT---TSCCEEECE-EC-----------------------CC
T ss_pred HHHHHHHh--CCCCcEEEEeCCCcEEcHHHHHHHHHhCCC---CCCEEEEEe-cc-Cccccc---cccCccccccccccC
Confidence 99998664 368999999999999999999999998874 688999998 43 334442 455554444444554
Q ss_pred Ccc-ccceEeeCHHHHHHHHHHhccCC-------CCCCccchhhHHhhHH-hCCCceeecCCCCCCCC
Q psy14358 236 PHC-HGNALLYSPDVVFKLYQHLQTDQ-------EYFWVDDVFITGIVFS-KLNLTHAKFSWWPGHDE 294 (381)
Q Consensus 236 ~Y~-~G~gYvLS~d~a~~l~~~~~~~~-------~~~~~EDV~vTGi~l~-~~gi~~~~~~~f~~~~~ 294 (381)
|| +|+||+||++++++|+..... . .....||++| |+|++ ++||++++.++|+.+..
T Consensus 153 -y~~GGaG~vlSr~~l~~l~~~~~~-~~~~~~~~~~~~~dD~~l-G~Cl~~~lGV~~~~~~~Fh~~~~ 217 (280)
T 2j0a_A 153 -FATGGAGFCINRQLALKMVPWASG-SHFVDTSALIRLPDDCTV-GYIIECKLGGRLQPSPLFHSHLE 217 (280)
T ss_dssp -EECGGGCEEEEHHHHHHHHHHHTT-CTTSCCTTTTTSCHHHHH-HHHHHHTTCCCEEECTTCCCSSS
T ss_pred -cccCCCEEEECHHHHHHHHHhhcc-cccccccccCCCCccHHH-HHHHHhcCCCCceecccccCCCc
Confidence 65 678999999999999986544 2 2345799999 99998 99999999999998764
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=93.28 E-value=1.8 Score=42.87 Aligned_cols=190 Identities=12% Similarity=0.009 Sum_probs=99.6
Q ss_pred cEEEEEECCCCC-HHHHHHH----HHHhcc-CceEEEEecCC-ChhhHHHHHHHHhhCC-CEEEecccCCCCchhHHHHH
Q psy14358 86 VYLVLIHSAPYN-YDKRRLI----RNTWGT-RVSVYFFIGET-DPSNQTRLDIESETYH-DIVQGRFWDSYRNLTYKHTM 157 (381)
Q Consensus 86 ~Lli~V~S~p~~-~~rR~aI----R~TWg~-~v~~~FvlG~~-~~~~~~~L~~E~~~~~-DII~~df~DsY~NLt~Ktl~ 157 (381)
.+-|+|++.-+. ..-++.| ++|... ...++.|-..+ +.+..+.+++-.+.+. .|..+...++. ++ -.
T Consensus 30 ~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~-G~----~~ 104 (472)
T 1xhb_A 30 TTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRS-GL----IR 104 (472)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCC-CH----HH
T ss_pred CeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCC-Ch----HH
Confidence 466777777655 3333333 333322 23555555444 4445556666556666 46555443322 22 23
Q ss_pred HHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeee--cCCcceeccC-------Ccccc----
Q psy14358 158 VFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVW--EKLPVLRTYR-------SKWRV---- 224 (381)
Q Consensus 158 ~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~--~~~~~~R~~~-------sKwyv---- 224 (381)
+.....++. +.+||+..|+|+.+..+-|...+..... .+...++.... .......... -.|..
T Consensus 105 a~N~g~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (472)
T 1xhb_A 105 ARLKGAAVS-RGQVITFLDAHCECTAGWLEPLLARIKH---DRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRW 180 (472)
T ss_dssp HHHHHHHHC-CSSEEEEEESSEEECTTCHHHHHHHHHH---CTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEE
T ss_pred HHHHHHHhc-cCCeEEEECCCeEeCccHHHHHHHHHHh---CCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeec
Confidence 445555555 6899999999999987766665554321 12223332201 1110000000 01111
Q ss_pred ---ccccc-------cCCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358 225 ---SFSEY-------RDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286 (381)
Q Consensus 225 ---~~~~y-------p~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~ 286 (381)
+.... ......+++.|+++++++++.+++-.-... ......||+-+ ++=+...|.+....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~-~~~~g~ED~dl-~~R~~~~G~~i~~~ 250 (472)
T 1xhb_A 181 YPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAG-MDIWGGENLEI-SFRIWQCGGTLEIV 250 (472)
T ss_dssp EECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTT-SCTTCCCCSHH-HHHHHHTTCEEEEE
T ss_pred ccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCc-ccccCchhHHH-HHHHHhcCCeEEEc
Confidence 10000 001223678899999999999887532222 22334799999 87777788766543
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.60 E-value=3 Score=37.05 Aligned_cols=182 Identities=7% Similarity=-0.026 Sum_probs=92.8
Q ss_pred EEEEEECCCCCHHHHHHHHHHhcc---CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCC-----CchhHHHHHH
Q psy14358 87 YLVLIHSAPYNYDKRRLIRNTWGT---RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSY-----RNLTYKHTMV 158 (381)
Q Consensus 87 Lli~V~S~p~~~~rR~aIR~TWg~---~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY-----~NLt~Ktl~~ 158 (381)
+-|+|++.-....-+++|+.--.+ .+.++.+-..+.... ..+.++......|........- .|.. .-.+
T Consensus 3 vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t-~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--~~~a 79 (255)
T 1qg8_A 3 VSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEET-LNVIRPFLNDNRVRFYQSDISGVKERTEKTR--YAAL 79 (255)
T ss_dssp EEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHH-HHHHGGGGGSTTEEEEECCCCSHHHHHSSCH--HHHH
T ss_pred EEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchH-HHHHHHHhhcCCEEEEecccccccccccccC--HHHH
Confidence 346666654333333333333222 456666555443333 3344444334555443332100 2321 3345
Q ss_pred HHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeec--C--CcceeccCCccccccccccCCCC
Q psy14358 159 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWE--K--LPVLRTYRSKWRVSFSEYRDHFY 234 (381)
Q Consensus 159 lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~--~--~~~~R~~~sKwyv~~~~yp~~~y 234 (381)
++.+.+++ +.+|++..|+|.++..+.|...+...... +.-.+..|..... . ..+.. .+..+..... ...
T Consensus 80 ~N~gi~~a-~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~ 152 (255)
T 1qg8_A 80 INQAIEMA-EGEYITYATDDNIYMPDRLLKMVRELDTH-PEKAVIYSASKTYHLNENRDIVK----ETVRPAAQVT-WNA 152 (255)
T ss_dssp HHHHHHHC-CCSEEEEEETTEEECTTHHHHHHHHHHHC-TTCCEEEEEEEEEEEC---CEEE----EEEECCCSCB-SCC
T ss_pred HHHHHHHc-CCCEEEEeCCCCccChHHHHHHHHHHHhC-CCceEEEeceEEEEeCCCCcchh----hccCchHHHH-Hhh
Confidence 66667777 78999999999999877766666543210 1334555543111 1 01110 1111111111 134
Q ss_pred CCccccceEeeCHHHHHHHH-HHh----ccCCCCCCccchhhHHhhHHhCC
Q psy14358 235 PPHCHGNALLYSPDVVFKLY-QHL----QTDQEYFWVDDVFITGIVFSKLN 280 (381)
Q Consensus 235 P~Y~~G~gYvLS~d~a~~l~-~~~----~~~~~~~~~EDV~vTGi~l~~~g 280 (381)
..++.|++.++.+++.+++- .-. .. ......||..+ .+-+...|
T Consensus 153 ~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~-~~~~~~eD~~~-~~r~~~~g 201 (255)
T 1qg8_A 153 PCAIDHCSVMHRYSVLEKVKEKFGSYWDES-PAFYRIGDARF-FWRVNHFY 201 (255)
T ss_dssp TTTSCGGGEEEETHHHHHHHHHHSSSSCCC-GGGSTTHHHHH-HHHHTTTC
T ss_pred cCCCccceEEEEHHHHHhhcccccccccCC-cccchHHHHHH-HHHHHHhC
Confidence 46678999999999999986 320 01 22456799988 55554434
No 4
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=89.81 E-value=4.2 Score=42.88 Aligned_cols=192 Identities=10% Similarity=0.003 Sum_probs=97.7
Q ss_pred cEEEEEECCCCCHHHHHHHHHHhcc-----CceEEEEecCC--ChhhHHHHHHHHhh-CCCEEEecccCCCCchhHHHHH
Q psy14358 86 VYLVLIHSAPYNYDKRRLIRNTWGT-----RVSVYFFIGET--DPSNQTRLDIESET-YHDIVQGRFWDSYRNLTYKHTM 157 (381)
Q Consensus 86 ~Lli~V~S~p~~~~rR~aIR~TWg~-----~v~~~FvlG~~--~~~~~~~L~~E~~~-~~DII~~df~DsY~NLt~Ktl~ 157 (381)
.+-|+|++.-....-++.|..--.+ ...-+.|+... +......+.+..+. ...|....- + -.+.+.=-=.
T Consensus 181 kVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~~-~-N~G~a~a~N~ 258 (657)
T 4fix_A 181 NIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQ-P-NLGGSGGYSR 258 (657)
T ss_dssp CEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEEC-C-CCHHHHHHHH
T ss_pred eEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEEC-C-CCCHHHHHHH
Confidence 6667777765433334444332222 23245566544 33222223332222 234544332 2 1122322334
Q ss_pred HHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeec-CCc-cee------cc-CCcc------
Q psy14358 158 VFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWE-KLP-VLR------TY-RSKW------ 222 (381)
Q Consensus 158 ~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~-~~~-~~R------~~-~sKw------ 222 (381)
+++.+.... +++||+..|||+.+..+.|...+..... ......+|..... ..+ .+. +. ...|
T Consensus 259 Gl~~A~g~~-~~dyIlfLD~D~~~~pd~L~~ll~~l~~--~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 335 (657)
T 4fix_A 259 VMYEALKNT-DCQQILFMDDDIRLEPDSILRVLAMHRF--AKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHA 335 (657)
T ss_dssp HHHHHHHHC-CCSEEEEECSSEEECTHHHHHHHHHHHH--BSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTC
T ss_pred HHHHHHhcC-CCCEEEEECCCCccChhHHHHHHHHHHh--CCCcEEEEeEEecCCCCceeeecccEeccccccccccccc
Confidence 666666554 7899999999999998776666654321 0122344432121 111 000 00 0000
Q ss_pred -c--------c-----ccccccCCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358 223 -R--------V-----SFSEYRDHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286 (381)
Q Consensus 223 -y--------v-----~~~~yp~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~ 286 (381)
| + ....+.......|++|++.++.+++.+.+-- .. .-++..||+-+ ++=+.+.|.+....
T Consensus 336 ~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGg--fd-~~F~~~ED~Dl-~lR~~~~G~ki~~~ 409 (657)
T 4fix_A 336 EYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQ--PL-PLFIKWDDADY-GLRAAEHGYPTVTL 409 (657)
T ss_dssp CSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCS--CC-SCSSSSHHHHH-HHHHHHTTCCEEEE
T ss_pred cccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCC--Ch-hHhccCcHHHH-HHHHHHcCCeEEEE
Confidence 0 0 0011122234568899999999999988642 11 22456799999 88777888775543
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=88.78 E-value=5.9 Score=40.66 Aligned_cols=190 Identities=13% Similarity=0.049 Sum_probs=100.8
Q ss_pred cEEEEEECCCCC-HHHH----HHHHHHhcc-CceEEEEecCC-ChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHH
Q psy14358 86 VYLVLIHSAPYN-YDKR----RLIRNTWGT-RVSVYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMV 158 (381)
Q Consensus 86 ~Lli~V~S~p~~-~~rR----~aIR~TWg~-~v~~~FvlG~~-~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~ 158 (381)
.+-|+|++.-+. ..-+ .++++|... ...++.|-..+ +.++.+.|++..+.+..|..+...+. .++. .+
T Consensus 113 ~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~~----~A 187 (570)
T 2d7i_A 113 NTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGLI----RT 187 (570)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCHH----HH
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCHH----HH
Confidence 456778887665 2222 344445433 23566555444 54435666666666766655544332 2332 33
Q ss_pred HHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeee--cCCc-ceecc--C-----Cccccccc-
Q psy14358 159 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVW--EKLP-VLRTY--R-----SKWRVSFS- 227 (381)
Q Consensus 159 lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~--~~~~-~~R~~--~-----sKwyv~~~- 227 (381)
.....++. +.+||+..|+|+.+..+-|...+..... .....+|.... .... ..+.. . -.|.....
T Consensus 188 ~N~G~~~A-~gd~i~fLD~D~~~~p~~L~~ll~~l~~---~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (570)
T 2d7i_A 188 RMLGASVA-TGDVITFLDSHCEANVNWLPPLLDRIAR---NRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKR 263 (570)
T ss_dssp HHHHHHHC-CSSEEEECCSSEEECTTCSHHHHHHHHH---CTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEE
T ss_pred HHHHHHhc-CCCEEEEEcCCccccccHHHHHHHHHHh---CCCEEEeeeeeccCCCchhhccccCCcccccccccccccc
Confidence 44445555 6899999999999987655555443311 12334443211 1100 00100 0 01111000
Q ss_pred -------ccc---CCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358 228 -------EYR---DHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286 (381)
Q Consensus 228 -------~yp---~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~ 286 (381)
.+. ...-.+++.|++.++++++.+.+-.-... ......||+-+ .+=+...|.+....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~-~~~~g~ED~dl-~~Rl~~~G~~i~~~ 330 (570)
T 2d7i_A 264 IPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPG-LEIWGGEQYEI-SFKVWMCGGRMEDI 330 (570)
T ss_dssp ECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTT-CCSSSSHHHHH-HHHHHHTTCEEEEE
T ss_pred cccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCc-ccccCcchHHH-HHHHHhCCCeEEEc
Confidence 010 01123567899999999999887432222 22333799999 77777788776544
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=85.79 E-value=9.7 Score=38.04 Aligned_cols=186 Identities=12% Similarity=0.007 Sum_probs=96.3
Q ss_pred cEEEEEECCCCCH-HHH----HHHHHHhcc-CceEEEEecCC-ChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHH
Q psy14358 86 VYLVLIHSAPYNY-DKR----RLIRNTWGT-RVSVYFFIGET-DPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMV 158 (381)
Q Consensus 86 ~Lli~V~S~p~~~-~rR----~aIR~TWg~-~v~~~FvlG~~-~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~ 158 (381)
.+-|+|++.-+.. .-+ .++++|... ...+++|-..+ +.+... ..+.+..|..+...+ |.- .-.+
T Consensus 67 ~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~----~~~~~~~v~vi~~~~---n~G--~~~A 137 (501)
T 2ffu_A 67 ATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGA----LLGKIEKVRVLRNDR---REG--LMRS 137 (501)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHH----GGGGBTTEEEEECSS---CCH--HHHH
T ss_pred CEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHH----HHhcCCCEEEEECCC---CcC--HHHH
Confidence 4557777776543 222 334444433 24666665444 443322 233455665544333 221 2345
Q ss_pred HHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeee--cCCcc--------eecc-----CCccc
Q psy14358 159 FKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVW--EKLPV--------LRTY-----RSKWR 223 (381)
Q Consensus 159 lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~--~~~~~--------~R~~-----~sKwy 223 (381)
.....++. +.+||+..|+|..+..+-|...+..... .+...+|.... ..... .+.. ..+|.
T Consensus 138 ~N~G~~~A-~gd~i~flD~D~~~~p~~L~~ll~~~~~---~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (501)
T 2ffu_A 138 RVRGADAA-QAKVLTFLDSHCECNEHWLEPLLERVAE---DRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWD 213 (501)
T ss_dssp HHHHHHHC-CSSEEEECCSSEEECTTCHHHHHHHHHH---CTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEE
T ss_pred HHHHHHhc-CCCEEEEECCCcccCccHHHHHHHHHHh---CCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccc
Confidence 55555666 7899999999999987766665554321 11223333211 00000 0000 00110
Q ss_pred -ccccc------cc-CCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358 224 -VSFSE------YR-DHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286 (381)
Q Consensus 224 -v~~~~------yp-~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~ 286 (381)
++... -+ .....+++.|++.++++++.+.+-.-... ......||+-+ .+=+...|.+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~-~~~~g~ED~dl-~~Rl~~~G~~i~~~ 282 (501)
T 2ffu_A 214 YMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMM-MDVWGGENLEI-SFRVWQCGGSLEII 282 (501)
T ss_dssp ECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTT-CCSSSSHHHHH-HHHHHHTTCEEEEE
T ss_pred cCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCcc-ccccCcchHHH-HHHHHhcCCeEEEc
Confidence 11000 00 01123577899999999999887533222 33334899999 77677778766544
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=75.77 E-value=31 Score=35.13 Aligned_cols=182 Identities=8% Similarity=-0.009 Sum_probs=91.6
Q ss_pred cEEEEEECCCCCHHHHHHHHHHhcc---CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHH
Q psy14358 86 VYLVLIHSAPYNYDKRRLIRNTWGT---RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWV 162 (381)
Q Consensus 86 ~Lli~V~S~p~~~~rR~aIR~TWg~---~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~ 162 (381)
.+-|+|++.-....-+++|..--.+ .+.++.+-+.+.....+.+++-.+.+..|.... .++ .+. -.+++.+
T Consensus 376 ~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n-~G~----~~a~n~g 449 (625)
T 2z86_A 376 LVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKN-KGI----GSASNTA 449 (625)
T ss_dssp SEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECC-CCH----HHHHHHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCC-CCH----HHHHHHH
Confidence 4556777664333334444333333 456665554443333444444445556665543 221 222 2345556
Q ss_pred HHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeee--cCCcceeccCCcccccccccc-CCCCCCccc
Q psy14358 163 VYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVW--EKLPVLRTYRSKWRVSFSEYR-DHFYPPHCH 239 (381)
Q Consensus 163 ~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~--~~~~~~R~~~sKwyv~~~~yp-~~~yP~Y~~ 239 (381)
.+++ +.+|++..|+|..+..+.|...+...... +.-....|.... ......... +..+ .+. ....-.++.
T Consensus 450 ~~~a-~g~~i~~ld~D~~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~ 522 (625)
T 2z86_A 450 VRLC-RGFYIGQLDSDDFLEPDAVELCLDEFRKD-LSLACVYTTNRNIDREGNLISNG---YNWP--IYSREKLTSAMIC 522 (625)
T ss_dssp HHHC-CSSEEEECCTTCEECTTHHHHHHHHHHHC-TTCSEEEEEEEEECTTSCEEEEC---CCCS--SCCHHHHTTSCCC
T ss_pred HHhc-CCCEEEEECCCcccChhHHHHHHHHHHhC-CCeeEEEeeeEEECCCCCEeccC---cccc--cCCHHHHhhcccC
Confidence 6666 78999999999999888777666543110 123344443211 111111110 0000 000 011224567
Q ss_pred cceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceee
Q psy14358 240 GNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAK 285 (381)
Q Consensus 240 G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~ 285 (381)
|++.++.+++.+.+-. -. ..+...||.-+ .+-+...| +...
T Consensus 523 ~~~~~~~r~~~~~~gg--fd-~~~~~~eD~dl-~~r~~~~g-~~~~ 563 (625)
T 2z86_A 523 HHFRMFTARAWNLTEG--FN-ESISNAVDYDM-YLKLSEVG-PFKH 563 (625)
T ss_dssp CSCEEEEHHHHTTTTC--CC-SSCSSCHHHHH-HHHHTTTS-CEEE
T ss_pred CceEEEEHHHHHHhCC--CC-CccCChHHHHH-HHHHHHhC-CEEE
Confidence 8888999887655421 11 23446799998 66555566 4433
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=74.16 E-value=36 Score=29.35 Aligned_cols=190 Identities=9% Similarity=0.017 Sum_probs=92.0
Q ss_pred cEEEEEECCCCCHHHHHHHHHHhcc---CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHH
Q psy14358 86 VYLVLIHSAPYNYDKRRLIRNTWGT---RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWV 162 (381)
Q Consensus 86 ~Lli~V~S~p~~~~rR~aIR~TWg~---~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~ 162 (381)
.+-|+|++.-....-+++|+.--.+ .+.++.+-..+.....+.+++-++++..|.... .+ |.- .-.+.+.+
T Consensus 6 ~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g 79 (240)
T 3bcv_A 6 KVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSG 79 (240)
T ss_dssp SEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHH
T ss_pred cEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHH
Confidence 3456677654333334444433333 556666654443334445555555666765554 22 221 22345566
Q ss_pred HHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeee--cCCc----ceecc-CCcccccccc--ccCCC
Q psy14358 163 VYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVW--EKLP----VLRTY-RSKWRVSFSE--YRDHF 233 (381)
Q Consensus 163 ~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~--~~~~----~~R~~-~sKwyv~~~~--yp~~~ 233 (381)
.+++ +.+|++..|+|.++..+.|...+..... ...++..|.... .... ..+.. ....+-.... +-...
T Consensus 80 ~~~a-~g~~i~~lD~Dd~~~~~~l~~l~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (240)
T 3bcv_A 80 LDVA-TGEYVAFCDSDDYVDSDMYMTMYNVAQK--YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDL 156 (240)
T ss_dssp HHHC-CSSEEEECCTTCCCCTTHHHHHHHHHHH--HTCSEEEC--------------------CEEECSHHHHHHHHGGG
T ss_pred HHHc-CCCEEEEECCCCcCCHHHHHHHHHHHHh--cCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHH
Confidence 6666 7899999999999987766666554321 023455444311 0110 00000 0011110000 00000
Q ss_pred C---C-------CccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358 234 Y---P-------PHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286 (381)
Q Consensus 234 y---P-------~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~ 286 (381)
+ | ...+|++.++.+++.+++--.-.. ...+..||..+ ++-+...|.+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~-~~~~~~eD~~~-~~r~~~~g~~i~~~ 217 (240)
T 3bcv_A 157 IASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVS-ERILPSEDLIF-NVDVLANSNIVCVL 217 (240)
T ss_dssp TSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCC-TTTCTTHHHHH-HHHHHTTCSCEEEC
T ss_pred hhcchhhccccccccchhheeeeHHHHHHcCCccCC-CCCccCCCHHH-HHHHHHhCCEEEEE
Confidence 0 0 013578899999999875211111 11235699999 66565666655443
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=70.77 E-value=40 Score=34.36 Aligned_cols=191 Identities=13% Similarity=0.026 Sum_probs=91.9
Q ss_pred cEEEEEECCCCCHHHHHHHHHHhcc----CceEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHH
Q psy14358 86 VYLVLIHSAPYNYDKRRLIRNTWGT----RVSVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKW 161 (381)
Q Consensus 86 ~Lli~V~S~p~~~~rR~aIR~TWg~----~v~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw 161 (381)
.+-|+|++.-+...-+..++.--.+ ...++.+-..++... ..+.++......+......+.-.+. -.+++.
T Consensus 94 ~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t-~~~~~~~~~~~~i~~i~~~~~~~g~----~~a~N~ 168 (625)
T 2z86_A 94 GLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENI-EEIVREFESLLNIKYVRQKDYGYQL----CAVRNL 168 (625)
T ss_dssp CEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCH-HHHHHTTTTTSCEEEEEECCCSCCH----HHHHHH
T ss_pred cEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhH-HHHHHHhhhcCCeEEEEeCCCCcch----hHHHHH
Confidence 5667777765432233333333222 455555544442222 2333333222344433322211111 234555
Q ss_pred HHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeec-CCc--c---------eec------------
Q psy14358 162 VVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWE-KLP--V---------LRT------------ 217 (381)
Q Consensus 162 ~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~-~~~--~---------~R~------------ 217 (381)
+.+.+ +.+|++..|+|..+..+.|...+..... ......+|..... ... . .+.
T Consensus 169 g~~~a-~g~~v~~lD~D~~~~~~~l~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (625)
T 2z86_A 169 GLRAA-KYNYVAILDCDMAPNPLWVQSYMELLAV--DDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAG 245 (625)
T ss_dssp HHHHC-CSSEEEEECTTEEECTTHHHHHHHHHHH--CTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------
T ss_pred HHHhC-CcCEEEEECCCCCCCHHHHHHHHHHHhc--CCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhh
Confidence 55565 7899999999999987776666654321 0122333332111 000 0 000
Q ss_pred -----cCCcccccc----ccccCC-CCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358 218 -----YRSKWRVSF----SEYRDH-FYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286 (381)
Q Consensus 218 -----~~sKwyv~~----~~yp~~-~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~ 286 (381)
....|.... ...... .-..++.|++.++++++.+.+---... ......||..+ ++=+...|.+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~-~~~~g~ED~dl-~~Rl~~~G~~i~~~ 322 (625)
T 2z86_A 246 KVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEE-FTHWGGEDNEF-GYRLYREGCYFRSV 322 (625)
T ss_dssp ------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTT-CSSCCCHHHHH-HHHHHHTTCEEEEC
T ss_pred hhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccc-cccCCcchhhh-hhhHHhCCceEEEc
Confidence 000111100 000000 111357899999999999887422112 22223799999 88777778765544
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=66.66 E-value=1.2e+02 Score=32.39 Aligned_cols=125 Identities=10% Similarity=-0.034 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHhCCCccEEEEeCCceeeeHHHHHHHHHhcCCCCCCCceEEEeeeecCCcc-eeccCCccc-ccc--cc
Q psy14358 153 YKHTMVFKWVVYNCPHVKYVFKLDDDVFMNVIQLDELLTRTLSPHGTRNLLMCPIVWEKLPV-LRTYRSKWR-VSF--SE 228 (381)
Q Consensus 153 ~Ktl~~lkw~~~~cp~a~fvlK~DDD~fvnv~~L~~~L~~~~~~~~~~~l~~G~~~~~~~~~-~R~~~sKwy-v~~--~~ 228 (381)
.|. ..++.+.+++ +.+|++..|+|+.+..+.+.+.+...... ++-....|.....+..+ .++. +.+. ++. +.
T Consensus 225 GKa-~alN~gl~~a-~gd~Il~lDaD~~~~pd~L~~lv~~~~~d-p~v~~V~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 300 (802)
T 4hg6_A 225 AKA-GNMSAALERL-KGELVVVFDADHVPSRDFLARTVGYFVED-PDLFLVQTPHFFINPDPIQRNL-ALGDRCPPENEM 300 (802)
T ss_dssp HHH-HHHHHHHHHC-CCSEEEECCTTEEECTTHHHHHHHHHHHS-SSCCEEECCCCBSSCCHHHHHH-TCCTTSCCTTHH
T ss_pred cch-HHHHHHHHhc-CCCEEEEECCCCCcChHHHHHHHHHHhcC-CCeEEEeccEEEeCCchHhhhh-hHHhhhhHHHHH
Confidence 444 3567777777 78999999999999988777666544100 12233333221111111 1110 0000 000 00
Q ss_pred -cc------CCCCCCccccceEeeCHHHHHHHHHHhccCCCCCCccchhhHHhhHHhCCCceeec
Q psy14358 229 -YR------DHFYPPHCHGNALLYSPDVVFKLYQHLQTDQEYFWVDDVFITGIVFSKLNLTHAKF 286 (381)
Q Consensus 229 -yp------~~~yP~Y~~G~gYvLS~d~a~~l~~~~~~~~~~~~~EDV~vTGi~l~~~gi~~~~~ 286 (381)
+. ...-.+++.|++.++.+++.+.+-.- ....-.||..+ +.-+.+.|.+....
T Consensus 301 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf----~~~~~~ED~~l-~~rl~~~G~ri~~~ 360 (802)
T 4hg6_A 301 FYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGF----AGETITEDAET-ALEIHSRGWKSLYI 360 (802)
T ss_dssp HHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTC----CCSSSSHHHHH-HHHHHTTTCCEEEC
T ss_pred HHHHHHhhHhhcCCceecccchhhhHHHHHHcCCc----CCCCcchHHHH-HHHHHHcCCeEEEe
Confidence 00 00112457899999999999876321 12233599998 88888877765543
No 11
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=44.20 E-value=32 Score=28.13 Aligned_cols=51 Identities=18% Similarity=0.168 Sum_probs=40.0
Q ss_pred EEECCCCCHHHHHHHHHHhcc--CceEEEEecCCChhhHHHHHHHHhhCCCEE
Q psy14358 90 LIHSAPYNYDKRRLIRNTWGT--RVSVYFFIGETDPSNQTRLDIESETYHDIV 140 (381)
Q Consensus 90 ~V~S~p~~~~rR~aIR~TWg~--~v~~~FvlG~~~~~~~~~L~~E~~~~~DII 140 (381)
-|.|.....+-|..||+-|-+ .+.++-++...+.++.....+|+.+.|=-+
T Consensus 54 dvrtvedkedfrenireiwerypqldvvvivttddkewikdfieeakergvev 106 (162)
T 2l82_A 54 DVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEV 106 (162)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCTTCCEEEEEECCCHHHHHHHHHHHHHTTCEE
T ss_pred ceeeeccHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHHHHhcCcEE
Confidence 355556666779999999998 677777777778888888899998888544
No 12
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=40.32 E-value=2e+02 Score=25.68 Aligned_cols=142 Identities=10% Similarity=0.045 Sum_probs=76.1
Q ss_pred eEEEEecCCChhhHHHHHHHHhhCCCEEEecccCCCCchhHHHHHHHHHHHHhCCCccEEEEeCCc---eeeeHHHHHHH
Q psy14358 113 SVYFFIGETDPSNQTRLDIESETYHDIVQGRFWDSYRNLTYKHTMVFKWVVYNCPHVKYVFKLDDD---VFMNVIQLDEL 189 (381)
Q Consensus 113 ~~~FvlG~~~~~~~~~L~~E~~~~~DII~~df~DsY~NLt~Ktl~~lkw~~~~cp~a~fvlK~DDD---~fvnv~~L~~~ 189 (381)
+..|++-.-+. ..-.|+.+..+.|==+++.+.++.-...+ -.+.=.|+.. .++++++-+|-| +-.+++.+.++
T Consensus 2 ~~~~~~~~~~~-~~l~l~~~l~~~gi~~~l~~~~SlI~raR-N~lv~~Fl~~--~~~dhllfIDAD~~~I~FdPe~V~rL 77 (203)
T 2c0n_A 2 RTLFFIPSMGS-VRLPLIDFLVKNDIEYVILSRRNHVAVQR-EIALDMFLEM--KDYDTLAFLDEDVVPIEIDFQKVEAK 77 (203)
T ss_dssp CEEEEEECSSC-CCHHHHHHHHHTTCCEEEECCCSCHHHHH-HHHHHHHHHC--TTCCEEEEECTTEEEEECCHHHHHHH
T ss_pred ceEEEeccCCc-eehHHHHHHHhCCCeEEEEccccchHHHH-HHHHHHHHhc--CCCCEEEEEeCCCCccccCHHHHHHH
Confidence 44555533311 12345555555443345555544332222 2222234442 368999999999 99999999999
Q ss_pred HHhcCCCCCCCceEEEeeeecCCcceeccCCccccccccccCCC---CCCccccceEeeCHHHHHHHHHHhcc---C--C
Q psy14358 190 LTRTLSPHGTRNLLMCPIVWEKLPVLRTYRSKWRVSFSEYRDHF---YPPHCHGNALLYSPDVVFKLYQHLQT---D--Q 261 (381)
Q Consensus 190 L~~~~~~~~~~~l~~G~~~~~~~~~~R~~~sKwyv~~~~yp~~~---yP~Y~~G~gYvLS~d~a~~l~~~~~~---~--~ 261 (381)
|.. +.++..|.....+.. .. +.+ ...|.... =..+|++|..+++|.+.++|....-. . .
T Consensus 78 l~~------g~DVV~GsYp~K~~~---~~-s~~---a~~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~ 144 (203)
T 2c0n_A 78 FNE------GYDVVCGYYYLKTLR---GY-SVY---RKDWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIES 144 (203)
T ss_dssp HHH------TCSEEEEECBCTTSS---SB-SEE---SSSBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC------
T ss_pred HhC------CCCEEEEEeeccCCC---cc-chH---HHHHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhh
Confidence 964 346666665222111 00 000 11222211 13688889999999999987554321 0 1
Q ss_pred CCCCccchhh
Q psy14358 262 EYFWVDDVFI 271 (381)
Q Consensus 262 ~~~~~EDV~v 271 (381)
+..--|||++
T Consensus 145 ~~~~gEdv~F 154 (203)
T 2c0n_A 145 PHWIGEDVYF 154 (203)
T ss_dssp ---CCHHHHH
T ss_pred ccccCCceEE
Confidence 2223488887
Done!