RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14360
         (471 letters)



>d2zoda2 d.139.1.1 (A:155-336) Selenide, water dikinase SelD
           {Aquifex aeolicus [TaxId: 63363]}
          Length = 182

 Score = 25.7 bits (55), Expect = 9.8
 Identities = 15/109 (13%), Positives = 34/109 (31%)

Query: 238 ALVVVGSIGFGILCTYSLQFYVPVAIIWAELEEKYGPFKHPAFVPASSPSLSGTGKNQQT 297
            L++   IG GIL     +  +    I   +E           +  S  + + T      
Sbjct: 11  LLILTKPIGTGILIKGLKEGILKEEDINEAIENMLALNDKARNLMLSLDATACTDVTGFG 70

Query: 298 IPDEIWSVVTITAVQICLALDIDYKLHYHMAIMLAPILFTAMIRNLKYI 346
           +    W++   + +   +  +          ++   I     I NL ++
Sbjct: 71  LLGHAWNICKNSNIGARIFFEKVPYYQLSENLVKKKIYPKGAIENLNFV 119


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.328    0.144    0.433 

Gapped
Lambda     K      H
   0.267   0.0424    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,782,865
Number of extensions: 84784
Number of successful extensions: 192
Number of sequences better than 10.0: 1
Number of HSP's gapped: 192
Number of HSP's successfully gapped: 3
Length of query: 471
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 382
Effective length of database: 1,185,626
Effective search space: 452909132
Effective search space used: 452909132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.7 bits)