Query psy14361
Match_columns 223
No_of_seqs 178 out of 1007
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 17:56:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14361.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14361hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1443|consensus 100.0 4.9E-35 1.1E-39 250.8 10.0 185 16-223 36-220 (349)
2 KOG1441|consensus 100.0 3.3E-32 7.2E-37 238.8 17.2 176 20-223 43-219 (316)
3 PTZ00343 triose or hexose phos 99.9 6.5E-25 1.4E-29 196.6 16.5 178 21-223 74-252 (350)
4 TIGR00817 tpt Tpt phosphate/ph 99.9 6.1E-22 1.3E-26 173.4 14.3 172 21-223 27-198 (302)
5 PF08449 UAA: UAA transporter 99.8 1.9E-20 4.1E-25 164.4 14.6 166 23-221 30-205 (303)
6 KOG1581|consensus 99.8 2E-18 4.2E-23 148.7 15.3 182 4-218 30-220 (327)
7 KOG1580|consensus 99.7 3.4E-18 7.4E-23 142.9 3.3 169 17-218 45-220 (337)
8 KOG1442|consensus 99.7 3.2E-16 6.9E-21 133.5 9.2 179 16-221 52-236 (347)
9 KOG1444|consensus 99.5 9.6E-14 2.1E-18 120.8 9.1 170 22-222 38-209 (314)
10 PF06027 DUF914: Eukaryotic pr 99.5 6.4E-13 1.4E-17 118.2 14.2 172 21-223 39-219 (334)
11 KOG1582|consensus 99.4 1.6E-13 3.4E-18 117.1 1.0 144 19-173 68-216 (367)
12 KOG3912|consensus 99.3 6.3E-11 1.4E-15 101.7 12.9 166 21-215 35-221 (372)
13 PF04142 Nuc_sug_transp: Nucle 99.2 1.6E-10 3.4E-15 99.0 12.2 112 59-174 13-141 (244)
14 TIGR00950 2A78 Carboxylate/Ami 99.1 4.2E-09 9E-14 89.6 15.5 137 24-173 17-154 (260)
15 PLN00411 nodulin MtN21 family 98.9 5.5E-08 1.2E-12 87.7 14.3 143 25-173 42-215 (358)
16 PRK11272 putative DMT superfam 98.8 2.6E-07 5.5E-12 80.7 15.2 134 25-169 36-172 (292)
17 KOG2765|consensus 98.8 1.5E-07 3.2E-12 84.0 12.6 136 62-221 157-300 (416)
18 KOG1583|consensus 98.7 8.6E-09 1.9E-13 88.5 3.0 137 27-174 35-191 (330)
19 PRK11453 O-acetylserine/cystei 98.7 7.5E-07 1.6E-11 78.0 14.1 134 22-172 30-168 (299)
20 TIGR00688 rarD rarD protein. T 98.6 4.9E-07 1.1E-11 77.2 11.9 138 25-169 29-168 (256)
21 PRK15430 putative chlorampheni 98.6 4.4E-07 9.5E-12 79.5 11.8 139 22-169 33-171 (296)
22 PRK11689 aromatic amino acid e 98.6 1.2E-06 2.6E-11 76.6 13.5 137 22-172 30-181 (295)
23 PRK10532 threonine and homoser 98.5 8.7E-06 1.9E-10 71.2 15.7 133 22-172 38-173 (293)
24 PF00892 EamA: EamA-like trans 98.4 3.2E-07 6.8E-12 68.7 5.1 107 22-137 17-124 (126)
25 COG0697 RhaT Permeases of the 98.4 2.5E-05 5.5E-10 66.5 15.8 103 65-170 71-177 (292)
26 TIGR03340 phn_DUF6 phosphonate 98.4 3.4E-06 7.5E-11 73.1 10.4 104 63-169 62-166 (281)
27 PF03151 TPT: Triose-phosphate 98.3 2.3E-06 5.1E-11 67.0 7.1 58 148-223 1-58 (153)
28 COG5070 VRG4 Nucleotide-sugar 98.3 1.2E-06 2.7E-11 73.5 5.4 172 18-223 30-208 (309)
29 PF13536 EmrE: Multidrug resis 98.3 1.1E-06 2.3E-11 66.3 4.6 74 66-143 36-110 (113)
30 KOG2234|consensus 98.2 2.1E-05 4.4E-10 70.0 10.9 131 62-215 91-232 (345)
31 KOG4314|consensus 98.0 1.9E-05 4E-10 65.4 6.6 116 57-175 46-163 (290)
32 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.0019 4.2E-08 56.5 13.7 96 71-169 66-174 (290)
33 KOG2766|consensus 97.5 0.00013 2.8E-09 62.6 4.8 142 20-173 43-192 (336)
34 PRK15051 4-amino-4-deoxy-L-ara 97.4 0.00061 1.3E-08 51.4 7.2 63 72-137 45-107 (111)
35 TIGR00950 2A78 Carboxylate/Ami 97.3 0.0012 2.6E-08 56.0 8.7 100 26-134 159-259 (260)
36 COG2510 Predicted membrane pro 97.3 0.00036 7.8E-09 53.8 4.3 109 25-139 31-139 (140)
37 PLN00411 nodulin MtN21 family 97.0 0.002 4.3E-08 58.2 6.6 67 67-136 259-325 (358)
38 KOG4510|consensus 96.8 0.0014 3.1E-08 56.7 4.3 95 71-168 104-212 (346)
39 PRK11272 putative DMT superfam 96.7 0.0045 9.7E-08 54.0 6.9 109 24-139 176-285 (292)
40 TIGR00803 nst UDP-galactose tr 96.7 0.0026 5.6E-08 53.2 4.6 83 88-173 2-111 (222)
41 PF03151 TPT: Triose-phosphate 96.3 0.028 6E-07 43.7 8.0 73 63-138 80-152 (153)
42 PRK02971 4-amino-4-deoxy-L-ara 95.9 0.0082 1.8E-07 46.5 3.3 69 68-139 51-122 (129)
43 TIGR03340 phn_DUF6 phosphonate 95.7 0.008 1.7E-07 52.0 3.0 67 67-136 214-280 (281)
44 PRK10452 multidrug efflux syst 95.4 0.016 3.4E-07 44.4 3.4 65 70-137 36-101 (120)
45 PRK10532 threonine and homoser 95.3 0.1 2.2E-06 45.5 8.3 60 67-129 211-271 (293)
46 PRK11689 aromatic amino acid e 94.9 0.033 7.1E-07 48.6 4.2 76 58-137 210-285 (295)
47 COG2962 RarD Predicted permeas 94.9 0.36 7.9E-06 42.3 10.4 84 73-163 76-164 (293)
48 PF05653 Mg_trans_NIPA: Magnes 94.8 0.21 4.6E-06 44.1 9.2 70 65-137 50-120 (300)
49 PRK11453 O-acetylserine/cystei 94.6 0.15 3.2E-06 44.5 7.5 71 64-137 214-285 (299)
50 PRK09541 emrE multidrug efflux 94.3 0.17 3.6E-06 38.1 6.3 65 70-137 36-101 (110)
51 COG5006 rhtA Threonine/homoser 94.3 1 2.2E-05 39.0 11.5 127 26-169 41-170 (292)
52 PRK11431 multidrug efflux syst 93.9 0.079 1.7E-06 39.6 3.7 65 70-137 35-100 (105)
53 COG2076 EmrE Membrane transpor 93.6 0.24 5.1E-06 37.1 5.8 64 70-136 36-100 (106)
54 PRK15430 putative chlorampheni 93.6 0.065 1.4E-06 46.8 3.3 65 67-134 216-280 (296)
55 PRK10650 multidrug efflux syst 93.4 0.14 3.1E-06 38.5 4.3 64 70-136 41-105 (109)
56 TIGR00817 tpt Tpt phosphate/ph 93.2 0.068 1.5E-06 46.6 2.7 53 79-134 236-288 (302)
57 PTZ00343 triose or hexose phos 92.5 0.52 1.1E-05 42.3 7.5 61 73-136 281-345 (350)
58 PF10639 UPF0546: Uncharacteri 92.1 0.19 4.2E-06 38.0 3.5 70 64-137 42-112 (113)
59 TIGR00776 RhaT RhaT L-rhamnose 91.5 0.44 9.6E-06 41.6 5.8 64 70-136 217-285 (290)
60 PF00893 Multi_Drug_Res: Small 91.5 0.26 5.6E-06 35.8 3.6 54 73-129 38-92 (93)
61 PF06800 Sugar_transport: Suga 91.4 4.2 9.2E-05 35.4 11.5 101 67-167 48-158 (269)
62 COG0697 RhaT Permeases of the 87.6 0.67 1.5E-05 39.1 3.8 72 64-138 214-286 (292)
63 PF06027 DUF914: Eukaryotic pr 82.9 2.4 5.2E-05 38.1 5.1 60 80-142 249-308 (334)
64 TIGR00803 nst UDP-galactose tr 82.7 1.8 3.9E-05 35.9 4.0 62 72-136 160-221 (222)
65 PF06800 Sugar_transport: Suga 81.1 2.8 6.2E-05 36.5 4.8 70 64-134 196-266 (269)
66 PF08449 UAA: UAA transporter 74.6 11 0.00024 32.9 6.6 67 65-134 226-292 (303)
67 PF04657 DUF606: Protein of un 74.2 15 0.00033 28.5 6.7 104 24-135 29-137 (138)
68 KOG2922|consensus 73.2 5.1 0.00011 35.8 4.1 66 69-137 68-134 (335)
69 COG5006 rhtA Threonine/homoser 71.3 7.1 0.00015 33.9 4.4 52 80-134 226-277 (292)
70 PRK13499 rhamnose-proton sympo 68.9 90 0.002 28.2 11.5 96 68-163 77-190 (345)
71 COG2962 RarD Predicted permeas 63.2 6.5 0.00014 34.6 2.7 66 66-134 213-278 (293)
72 TIGR00688 rarD rarD protein. T 61.2 24 0.00053 29.6 5.9 48 64-111 208-255 (256)
73 PF09930 DUF2162: Predicted tr 39.4 98 0.0021 26.2 6.0 51 56-106 94-144 (224)
74 KOG2765|consensus 31.1 26 0.00056 32.2 1.3 60 81-143 335-394 (416)
75 COG3274 Predicted O-acyltransf 23.9 2.4E+02 0.0052 25.4 6.0 30 88-117 42-71 (332)
76 COG4975 GlcU Putative glucose 23.3 30 0.00065 30.1 0.2 18 27-44 179-196 (288)
No 1
>KOG1443|consensus
Probab=100.00 E-value=4.9e-35 Score=250.78 Aligned_cols=185 Identities=43% Similarity=0.788 Sum_probs=174.2
Q ss_pred CCCccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHH
Q psy14361 16 SDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTM 95 (223)
Q Consensus 16 ~~~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm 95 (223)
+..+++|+||++++.+|+++.++++...++..++..++++.+.+|+++.|++.|+|++.++|++++|+|+.|+++|+|+|
T Consensus 36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM 115 (349)
T KOG1443|consen 36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTM 115 (349)
T ss_pred hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeee
Confidence 44567799999999999999999999999888777666678899999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy14361 96 TKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDL 175 (223)
Q Consensus 96 ~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~ 175 (223)
.|++.++|+++++.+|+.||++ |...+.+++|.+|+.++++++.+|+..|+.++++|++++|+||+++|.++++.
T Consensus 116 ~KSSsi~FIllFs~if~lEk~~---w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~-- 190 (349)
T KOG1443|consen 116 TKSSSILFILLFSLIFKLEKFR---WALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQ-- 190 (349)
T ss_pred ccccHHHHHHHHHHHHHhHHHH---HHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcC--
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999999997
Q ss_pred ccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361 176 NMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE 223 (223)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E 223 (223)
+....||++++++++|++.+.|+|..+.+|
T Consensus 191 ------------------~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fE 220 (349)
T KOG1443|consen 191 ------------------PSAKRNPIDTIFHLQPWMSIGLLPLSLLFE 220 (349)
T ss_pred ------------------ccccCCCeeeHHHhhhHHHHHHHHHHHHHc
Confidence 222349999999999999999999999998
No 2
>KOG1441|consensus
Probab=100.00 E-value=3.3e-32 Score=238.78 Aligned_cols=176 Identities=19% Similarity=0.335 Sum_probs=159.1
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh
Q psy14361 20 WIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST 99 (223)
Q Consensus 20 ~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~ 99 (223)
++|+||+++|.+|.+++++...+.+. .|.. +.++.+.+.+++.++|+|+.++++++++|.|+.|+||||+|++|++
T Consensus 43 ~~f~~p~~lt~~~~~~~~l~~~v~~~-l~~~---~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~ 118 (316)
T KOG1441|consen 43 YGFPFPITLTMLHLFCGALALLVIKV-LKLV---PPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKAL 118 (316)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHH-hcCC---CCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhh
Confidence 78999999999999999888777653 4543 3444445567899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Q psy14361 100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNS 179 (223)
Q Consensus 100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~ 179 (223)
+|++++++++++.+|+++ +.+++++.+++.||++++++|.+||+.|++.+++|.+.+++|+++.+++++++
T Consensus 119 ~P~~tvl~~~~~~~~~~s---~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~------ 189 (316)
T KOG1441|consen 119 MPPFTVLLSVLLLGKTYS---SMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSK------ 189 (316)
T ss_pred cchhHHHHHHHHhCCCCc---ceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc------
Confidence 999999999999999999 99999999999999999999999999999999999999999999999999766
Q ss_pred hHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHH-HHHHhcC
Q psy14361 180 KIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSIL-PFAILFE 223 (223)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll-~~~~~~E 223 (223)
+.+. |++++++|++|++++.++ |.+...|
T Consensus 190 --------------~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~ 219 (316)
T KOG1441|consen 190 --------------GESL-NSMNLLYYTAPISLIFLLIPFLDYVE 219 (316)
T ss_pred --------------cccc-CchHHHHHhhhHHHHHHhcchHhhhc
Confidence 3355 999999999999999999 8776654
No 3
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.93 E-value=6.5e-25 Score=196.63 Aligned_cols=178 Identities=21% Similarity=0.268 Sum_probs=154.1
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccc-hHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh
Q psy14361 21 IYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLC-WHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST 99 (223)
Q Consensus 21 ~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~ 99 (223)
.||||++++++|++++++++.+++. .+.. ++++.+ ++.+++.++|+|+++......+|.|++++++|++|++|++
T Consensus 74 ~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~---~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~ 149 (350)
T PTZ00343 74 MLPLPWTISSLQLFVGWLFALLYWA-TGFR---KIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAA 149 (350)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHH-hCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHh
Confidence 3899999999999999998776643 2321 223343 5557899999999988888889999999999999999999
Q ss_pred hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Q psy14361 100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNS 179 (223)
Q Consensus 100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~ 179 (223)
+|++++++++++++||++ ++++++++++++||++++.+|.++++.|++++++|+++.++|+++.|+++++++..
T Consensus 150 ~Pvft~lls~~~l~ek~s---~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~--- 223 (350)
T PTZ00343 150 EPVFTALLSILFLKQFLN---LYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEI--- 223 (350)
T ss_pred hHHHHHHHHHHHhCCCcc---HHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---
Confidence 999999999999999999 99999999999999999999999999999999999999999999999998776211
Q ss_pred hHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361 180 KIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE 223 (223)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E 223 (223)
..+. ++.+++++++++++++++|+.++.|
T Consensus 224 --------------~~~~-~~~~~~~~~~~~~~l~~lp~~~~~e 252 (350)
T PTZ00343 224 --------------GENL-TASNIYMLLTLIASLISLPLVLFFE 252 (350)
T ss_pred --------------cccC-CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1134 8889999999999999999988665
No 4
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.88 E-value=6.1e-22 Score=173.40 Aligned_cols=172 Identities=19% Similarity=0.265 Sum_probs=149.0
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhh
Q psy14361 21 IYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTS 100 (223)
Q Consensus 21 ~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~ 100 (223)
+|++|++++++|++++.+.+.+.++. +. +++++.+++ .++.++|+|+++++++.++|.|++|+|++++|++|+++
T Consensus 27 ~~~~P~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~ 101 (302)
T TIGR00817 27 VFPYPYFKTLISLAVGSLYCLLSWSS-GL---PKRLKISSA-LLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAME 101 (302)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHHh-CC---CCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcc
Confidence 38999999999999998887766321 11 123445665 47889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchh
Q psy14361 101 VVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSK 180 (223)
Q Consensus 101 pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~~ 180 (223)
|++++++++++++||++ ++.+++++++++|+.+.+.+|.++++.|.+++++|.++.+++.+..+++.+++
T Consensus 102 Pv~~~ll~~~~~~e~~~---~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~------- 171 (302)
T TIGR00817 102 PFFSVVLSAFFLGQEFP---STLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIK------- 171 (302)
T ss_pred hHHHHHHHHHHhCCCCc---HHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccC-------
Confidence 99999999999999999 88999999999999988777788889999999999999999999998876532
Q ss_pred HHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361 181 IIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE 223 (223)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E 223 (223)
+. ||.++..|+.+.+++.++|++...|
T Consensus 172 ---------------~~-~~~~~~~~~~~~~~~~l~p~~~~~~ 198 (302)
T TIGR00817 172 ---------------SL-DKTNLYAYISIMSLFLLSPPAFITE 198 (302)
T ss_pred ---------------CC-CcccHHHHHHHHHHHHHHHHHHHHc
Confidence 23 8999999999999999999987654
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.85 E-value=1.9e-20 Score=164.43 Aligned_cols=166 Identities=19% Similarity=0.253 Sum_probs=142.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHH
Q psy14361 23 KYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVV 102 (223)
Q Consensus 23 ~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi 102 (223)
+||++++++|+++..+.+.......+ .+++++.+ +++.++.++++.++..++|.|++|+|+|++++.|+++|+
T Consensus 30 ~~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i 102 (303)
T PF08449_consen 30 PFPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIP----LKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPI 102 (303)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcCh----HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHH
Confidence 89999999999999999888765433 11223333 455678999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcc----c------cHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy14361 103 FILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA----F------NWLGFSLVLLASFSSGLRWTLAQFVMQR 172 (223)
Q Consensus 103 ~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~----~------~~~G~~l~l~s~~~~al~~v~~q~ll~~ 172 (223)
+++++++++++||++ ++++++++++++|+++++.+|.+ . ...|+++.++|.+++|++.+++|++.++
T Consensus 103 ~vmi~~~l~~~k~y~---~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~ 179 (303)
T PF08449_consen 103 PVMILGVLILGKRYS---RRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKK 179 (303)
T ss_pred HHHHHHHHhcCcccc---HHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999887631 1 1349999999999999999999999887
Q ss_pred cccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHh
Q psy14361 173 SDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAIL 221 (223)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~ 221 (223)
+ +. ++.++++|.+.++.+.+++....
T Consensus 180 ~----------------------~~-~~~~~mfy~n~~~~~~~~~~~~~ 205 (303)
T PF08449_consen 180 Y----------------------GK-SPWELMFYTNLFSLPFLLILLFL 205 (303)
T ss_pred h----------------------CC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 23 88999999999999988877765
No 6
>KOG1581|consensus
Probab=99.80 E-value=2e-18 Score=148.72 Aligned_cols=182 Identities=14% Similarity=0.123 Sum_probs=157.8
Q ss_pred eeeeccccccCCCCCccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhh
Q psy14361 4 VVLRNSEEQDNSSDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQW 83 (223)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~ 83 (223)
.|+|.+....+++++.++|++|.++..+|-+++.++++.+.+..+. +.+.+-+|. +..-+|+....+-.++.-
T Consensus 30 gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~---~~~~~apl~----~y~~is~tn~~s~~~~ye 102 (327)
T KOG1581|consen 30 GVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKK---ELSGVAPLY----KYSLISFTNTLSSWCGYE 102 (327)
T ss_pred HHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccc---cCCCCCchh----HHhHHHHHhhcchHHHHH
Confidence 4789999999999999999999999999999999999887765332 223333443 334488999999999999
Q ss_pred hhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc---------cccHHHHHHHHH
Q psy14361 84 GLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT---------AFNWLGFSLVLL 154 (223)
Q Consensus 84 sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~---------~~~~~G~~l~l~ 154 (223)
||+|+|.+.+.++|+|+.++|++++.+.+++|++ +++|++..+|.+||.+++..+. ..++.|+.+...
T Consensus 103 aLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~---~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~ 179 (327)
T KOG1581|consen 103 ALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYS---SFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFG 179 (327)
T ss_pred HHHhccchHHHHHHHhhhhHHHHHHHHHhcCccC---cHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHH
Confidence 9999999999999999999999999999999999 9999999999999999987642 256899999999
Q ss_pred HHHHHHHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHH
Q psy14361 155 ASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPF 218 (223)
Q Consensus 155 s~~~~al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~ 218 (223)
+.++||+.+..|++++++. ++ ++.++++|++.++++.....
T Consensus 180 ~L~fDgfTn~tQd~lf~~~----------------------k~-s~~~mM~~vNLf~~i~~~~~ 220 (327)
T KOG1581|consen 180 YLLFDGFTNATQDSLFKKY----------------------KV-SSLHMMFGVNLFSAILNGTY 220 (327)
T ss_pred HHHHHhhHHhHHHHHhccC----------------------Cc-cHhHHHHHHHHHHHHHHHHh
Confidence 9999999999999999865 45 99999999999998876543
No 7
>KOG1580|consensus
Probab=99.71 E-value=3.4e-18 Score=142.90 Aligned_cols=169 Identities=14% Similarity=0.138 Sum_probs=140.2
Q ss_pred CCccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHH
Q psy14361 17 DYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMT 96 (223)
Q Consensus 17 ~~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~ 96 (223)
+..+.|.|...+.++|+.++.+++-++..+.+ +.+.+.. ..+....+++.+.+.++-+|.+++|+|++...+.
T Consensus 45 ~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~------~~~~D~t-~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlg 117 (337)
T KOG1580|consen 45 ESIEKFTFALALVFFQCTANTVFAKVLFLIRK------KTEIDNT-PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLG 117 (337)
T ss_pred cchheehHHHHHHHHHHHHHHHHHHhheeecc------cccccCC-cchHHHHHHHHHHHHHHhccchhcccCCcHHHhc
Confidence 45688999999999999999999987765422 1222221 1233355899999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc-------cccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 97 KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT-------AFNWLGFSLVLLASFSSGLRWTLAQFV 169 (223)
Q Consensus 97 Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~-------~~~~~G~~l~l~s~~~~al~~v~~q~l 169 (223)
|++.|++++++++++.+|+++ |++|+++++|++||+++.++|. +...+|-++.++|..++|+..+.++++
T Consensus 118 KScKPIPVMilGVl~~~KsY~---w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdri 194 (337)
T KOG1580|consen 118 KSCKPIPVMILGVLFAHKSYH---WRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRI 194 (337)
T ss_pred ccCCCcceeeeehhhhccccc---HHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHH
Confidence 999999999999999999999 9999999999999999999863 234688999999999999999999988
Q ss_pred hcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHH
Q psy14361 170 MQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPF 218 (223)
Q Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~ 218 (223)
-..+ .. +.-++++|++.+|.+.|..-
T Consensus 195 ra~y----------------------q~-~g~~MM~~~NlwStL~Lg~g 220 (337)
T KOG1580|consen 195 RASY----------------------QR-TGTSMMFYTNLWSTLYLGAG 220 (337)
T ss_pred HHhh----------------------cc-CchhhHHHHHHHHHHHhhhh
Confidence 4443 22 56689999999998877543
No 8
>KOG1442|consensus
Probab=99.66 E-value=3.2e-16 Score=133.49 Aligned_cols=179 Identities=18% Similarity=0.226 Sum_probs=146.4
Q ss_pred CCCccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccc---cccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHH
Q psy14361 16 SDYRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQ---KRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSL 92 (223)
Q Consensus 16 ~~~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~ 92 (223)
++.....+-|+++|+.|++++..+|.++.+..+..+.. +..+++.+ ..++++|+++.+.+.+.+.|++|+|++|+|
T Consensus 52 ss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~-t~r~vlplsvVfi~mI~fnnlcL~yVgVaF 130 (347)
T KOG1442|consen 52 SSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLA-TARQVLPLSVVFILMISFNNLCLKYVGVAF 130 (347)
T ss_pred hchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHH-HHHhhcchhheeeeehhccceehhhcceEE
Confidence 34445678899999999999999999887764433221 23345554 589999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC---ccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 93 YTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA---TAFNWLGFSLVLLASFSSGLRWTLAQFV 169 (223)
Q Consensus 93 ~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e---~~~~~~G~~l~l~s~~~~al~~v~~q~l 169 (223)
|++-|+.+.+|+++++++++|+|.+ .....++++|++|..+-...| ..++|.|.++.+.|++..|+..+.+++.
T Consensus 131 YyvgRsLttvFtVlLtyvllkqkTs---~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~ 207 (347)
T KOG1442|consen 131 YYVGRSLTTVFTVLLTYVLLKQKTS---FFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKV 207 (347)
T ss_pred EEeccchhhhHHHHhHHhhcccccc---cccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhhee
Confidence 9999999999999999999999999 888899999999999887777 5789999999999999999988888865
Q ss_pred hcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHh
Q psy14361 170 MQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAIL 221 (223)
Q Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~ 221 (223)
+..-++ --..+-+|.+-.+.+.-+|..++
T Consensus 208 l~~v~~-----------------------~iw~lt~ynnv~a~lLflpll~l 236 (347)
T KOG1442|consen 208 LPPVGD-----------------------CIWRLTAYNNVNALLLFLPLLIL 236 (347)
T ss_pred cccccC-----------------------eehhhHHHHHHHHHHHHHHHHHH
Confidence 544321 22566777777777777776544
No 9
>KOG1444|consensus
Probab=99.49 E-value=9.6e-14 Score=120.80 Aligned_cols=170 Identities=15% Similarity=0.236 Sum_probs=141.2
Q ss_pred cCchHHHHH--HHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh
Q psy14361 22 YKYPLSIVV--CHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST 99 (223)
Q Consensus 22 F~~P~~lt~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~ 99 (223)
++||..++. .|++++.+..+++.+ .|..+ .++++|+ ..|+.+|+++.+.+++..+--+++|++|+.+.+.|..
T Consensus 38 y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~---~~~l~~~-~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~ 112 (314)
T KOG1444|consen 38 YNFPMGLLLMLLQSLASVLVVLVLKR-LGLVN---FRPLDLR-TAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNL 112 (314)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHH-hceee---cCCcChH-HHHHHccHHHHHHHHHHHccccccccCchHHHHHhhc
Confidence 677777666 999999888877654 35543 4567776 4788999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Q psy14361 100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNS 179 (223)
Q Consensus 100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~ 179 (223)
+|+.+++....+++++++ +..+.++..+.+|-.....+|.+++..|+..++..++..+...+..++-++..+.
T Consensus 113 tii~~ai~E~lf~~~~~~---~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l---- 185 (314)
T KOG1444|consen 113 TIILTAIGEVLFFGKRPS---NKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANL---- 185 (314)
T ss_pred hHHHHHHhHHhhcCcCch---hhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhccccc----
Confidence 999999999999999999 9999999999999999989999999999999999999999988888777666522
Q ss_pred hHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhc
Q psy14361 180 KIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILF 222 (223)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~ 222 (223)
+..++++|=+-.+...+...+++.
T Consensus 186 -------------------~~~~lv~yNnl~~L~~l~~~~~~~ 209 (314)
T KOG1444|consen 186 -------------------NKFGLVFYNNLLSLPPLLILSFIT 209 (314)
T ss_pred -------------------cceeEEeehhHHHHHHHHHHHHHh
Confidence 445666666666666655555443
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.49 E-value=6.4e-13 Score=118.22 Aligned_cols=172 Identities=13% Similarity=0.065 Sum_probs=132.1
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhh
Q psy14361 21 IYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTS 100 (223)
Q Consensus 21 ~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~ 100 (223)
++..|.+++.+..+.-.++-.... ..|..++ +..+..++++++.++ +|++-.....+.+.|++|.+++-.|++.++.
T Consensus 39 ~~~~P~~Qs~~~Y~~l~~vy~~~~-~~r~~~~-~~~~~~~~~~w~y~l-la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~ 115 (334)
T PF06027_consen 39 GVNIPTFQSFFNYVLLALVYTPIL-LYRRGFK-KWLKVLKRPWWKYFL-LALLDVEANYLVVLAYQYTSVTSVQLLDCTS 115 (334)
T ss_pred CccCcHHHHHHHHHHHHHHHhhhh-hhccccc-cchhhcchhHHHHHH-HHHHHHHHHHHHHHHhhcccHhHHHhhhhhh
Confidence 788999999888766544322222 1222111 111222334555555 7899889999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc---------cccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy14361 101 VVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT---------AFNWLGFSLVLLASFSSGLRWTLAQFVMQ 171 (223)
Q Consensus 101 pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~---------~~~~~G~~l~l~s~~~~al~~v~~q~ll~ 171 (223)
.+++++++++++++|++ +..++++++.++|+++....|. +-...|-+++++|+++.|++++++|++.+
T Consensus 116 i~~~~~LS~~fL~~ry~---~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~ 192 (334)
T PF06027_consen 116 IPFVMILSFIFLKRRYS---WFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVK 192 (334)
T ss_pred hHHHHHHHHHHHHhhhh---HHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999 9999999999999987766552 13489999999999999999999999987
Q ss_pred ccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361 172 RSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE 223 (223)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E 223 (223)
+. |..+.+..+.-..++...+...++|
T Consensus 193 ~~-------------------------~~~~~lg~~Glfg~ii~~iq~~ile 219 (334)
T PF06027_consen 193 KA-------------------------PRVEFLGMLGLFGFIISGIQLAILE 219 (334)
T ss_pred cC-------------------------CHHHHHHHHHHHHHHHHHHHHHhee
Confidence 65 5567777777777777776666655
No 11
>KOG1582|consensus
Probab=99.35 E-value=1.6e-13 Score=117.13 Aligned_cols=144 Identities=15% Similarity=0.189 Sum_probs=124.2
Q ss_pred ccccC-chHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHh
Q psy14361 19 RWIYK-YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTK 97 (223)
Q Consensus 19 ~~~F~-~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~K 97 (223)
.++|+ |-|.+|.+|+++-..+.++-++.+ + .++..+|||.|. .++....++++++|-|+.|.+++...|-|
T Consensus 68 ~~gfkp~GWylTlvQf~~Ysg~glie~~~~---~-~k~r~iP~rtY~----~la~~t~gtmGLsn~SlgYLNYPtQviFK 139 (367)
T KOG1582|consen 68 VEGFKPFGWYLTLVQFLVYSGFGLIELQLI---Q-TKRRVIPWRTYV----ILAFLTVGTMGLSNGSLGYLNYPTQVIFK 139 (367)
T ss_pred cccCcccchHHHHHHHHHHHhhhheEEEee---c-ccceecchhHhh----hhHhhhhhccccCcCccccccCcHHHHHH
Confidence 45676 999999999998877766644321 1 245567887664 48889999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc----cccHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy14361 98 STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT----AFNWLGFSLVLLASFSSGLRWTLAQFVMQRS 173 (223)
Q Consensus 98 s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~----~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~ 173 (223)
+|..+++++.+.++.++|+. +..+.+...++.|+..++.-|. +||..|+.+...+.++||.-.-+||+.++..
T Consensus 140 ccKliPVmiggifIqGkRY~---v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~ 216 (367)
T KOG1582|consen 140 CCKLIPVMIGGIFIQGKRYG---VHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMN 216 (367)
T ss_pred hhhhhhhhheeeeecccccc---HHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhC
Confidence 99999999999999999999 9999999999999999988774 7899999999999999999999999988776
No 12
>KOG3912|consensus
Probab=99.28 E-value=6.3e-11 Score=101.74 Aligned_cols=166 Identities=15% Similarity=0.169 Sum_probs=127.8
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHhhhhcccc-----------ccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhh
Q psy14361 21 IYKYPLSIVVCHLVFKFLVALICRKVYELYTHQK-----------RVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIA 89 (223)
Q Consensus 21 ~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vs 89 (223)
+|.+|..++ ..|+.+...|....+..|+....+ ..+.|.+ -...+|=+++-.+...+.|.+|.+.+
T Consensus 35 gfqhpvlqa-l~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~--p~lfl~Pal~Di~gsslm~vgL~lTs 111 (372)
T KOG3912|consen 35 GFQHPVLQA-LLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN--PVLFLPPALCDIAGSSLMYVGLNLTS 111 (372)
T ss_pred ccccHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC--cceecChHHHHHhhhHHHHHHHHHhh
Confidence 399999998 889999988888776655432111 0001221 23456667788888889999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc----------cccHHHHHHHHHHHHHH
Q psy14361 90 VSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT----------AFNWLGFSLVLLASFSS 159 (223)
Q Consensus 90 vs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~----------~~~~~G~~l~l~s~~~~ 159 (223)
.|-+||+|....+||.+++..+++++.. .+.++++.-+..|+++..+.|. +--..|.++.+++.+.-
T Consensus 112 ASsfQMlRGaviIFvglfst~~Ln~ti~---~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiiv 188 (372)
T KOG3912|consen 112 ASSFQMLRGAVIIFVGLFSTMFLNRTIT---GRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIV 188 (372)
T ss_pred HHHHHHhhcchhhhhHHHHHHHHhcccc---hhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHH
Confidence 9999999999999999999999999999 7777888888888877665542 22368999999999999
Q ss_pred HHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHH
Q psy14361 160 GLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSI 215 (223)
Q Consensus 160 al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~l 215 (223)
|++.+.+||.++++ +. +|++..-+-.....+.+
T Consensus 189 aiQ~v~Eek~l~~~----------------------nV-~pl~avg~eGlfG~v~~ 221 (372)
T KOG3912|consen 189 AIQMVCEEKQLKKS----------------------NV-APLQAVGWEGLFGLVIL 221 (372)
T ss_pred HHHHHHHHhhhhhc----------------------cC-CHHHHhhhhhhHHHHHH
Confidence 99999999998887 34 77777766665554443
No 13
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.22 E-value=1.6e-10 Score=98.97 Aligned_cols=112 Identities=19% Similarity=0.267 Sum_probs=95.4
Q ss_pred chHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee
Q psy14361 59 CWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT 138 (223)
Q Consensus 59 ~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~ 138 (223)
++++.++..+| |+++++...+.+.++++.+.+.||+++.+..++++++++++++||.+ .+.+.++.+.+.|+++..
T Consensus 13 ~~~~~~~~~vP-A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls---~~qW~aL~lL~~Gv~lv~ 88 (244)
T PF04142_consen 13 SPKDTLKLAVP-ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLS---RRQWLALFLLVAGVVLVQ 88 (244)
T ss_pred hHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccc---hhhHHHHHHHHHHHheee
Confidence 34555666665 55688888899999999999999999999999999999999999999 777799999999998876
Q ss_pred ecCcc-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy14361 139 YKATA-----------------FNWLGFSLVLLASFSSGLRWTLAQFVMQRSD 174 (223)
Q Consensus 139 ~~e~~-----------------~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~ 174 (223)
.++.. ....|+++++++++++|+..++.|+++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~ 141 (244)
T PF04142_consen 89 LSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN 141 (244)
T ss_pred cCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 54321 1368999999999999999999999999984
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.10 E-value=4.2e-09 Score=89.63 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=106.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHH
Q psy14361 24 YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVF 103 (223)
Q Consensus 24 ~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~ 103 (223)
=|..++...++++.++.....+. + .+++++.+....-++..+++..+.+.|++|.|++...++.++.|++
T Consensus 17 ~~~~~~~~r~~~~~l~l~~~~~~-~---------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~ 86 (260)
T TIGR00950 17 PLYFAVFRRLIFALLLLLPLLRR-R---------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLY 86 (260)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh-c---------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHH
Confidence 37777878887776665544321 1 1233333333333346788888999999999999999999999999
Q ss_pred HHHHHHHhhccccchhhhhhhheecceeeeeeeeee-cCccccHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy14361 104 ILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY-KATAFNWLGFSLVLLASFSSGLRWTLAQFVMQRS 173 (223)
Q Consensus 104 v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~-~e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~ 173 (223)
+++++.++.|||++ ++.+.++.+..+|+.+... ++.+.+..|..+++++.++-+...+..++..++.
T Consensus 87 ~~~~~~l~~~e~~~---~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~ 154 (260)
T TIGR00950 87 VTLLSDLMGKERPR---KLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKE 154 (260)
T ss_pred HHHHHHHHccCCCc---HHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC
Confidence 99999999999999 8888999999999877543 3345678899999999999999998888876543
No 15
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.87 E-value=5.5e-08 Score=87.70 Aligned_cols=143 Identities=13% Similarity=0.131 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHH
Q psy14361 25 PLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFI 104 (223)
Q Consensus 25 P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v 104 (223)
|..+..+-+.++.++...+.+..+.. ++.++.+|++ +..+..+|++..+...+.+.+++|.|.+...++-++.|+++
T Consensus 42 ~~~~~~~R~~iA~l~Ll~~~~~~~~~--~~~~~~~~~~-~~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~ 118 (358)
T PLN00411 42 IYPFLGYSYLLASLLLLPSLFFTNRS--RSLPPLSVSI-LSKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALT 118 (358)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHh--cccCcchHHH-HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHH
Confidence 44456677777766555443322211 1123334554 34455577765556668999999999999999999999999
Q ss_pred HHHHHHh------hccccchhhhhhhheecceeeeeeeeee-cCc-----------------------ccc-HHHHHHHH
Q psy14361 105 LIFSLVF------QLEKKSRKRLRLYGESNPGTSGLVMFTY-KAT-----------------------AFN-WLGFSLVL 153 (223)
Q Consensus 105 ~l~~~~~------~~e~~s~~~~~~~~~l~~i~~Gv~l~~~-~e~-----------------------~~~-~~G~~l~l 153 (223)
+++++++ ++||.+ +++.+++++..+|+.+... ++. +.+ ..|..+++
T Consensus 119 ~lla~~~~~e~~~~~er~~---~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l 195 (358)
T PLN00411 119 FILAIIFRMEKVSFKERSS---VAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLT 195 (358)
T ss_pred HHHHHHHHhchhhhccccc---HHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHH
Confidence 9999999 599999 8888999998889876432 110 112 45999999
Q ss_pred HHHHHHHHHHHHHHHHhccc
Q psy14361 154 LASFSSGLRWTLAQFVMQRS 173 (223)
Q Consensus 154 ~s~~~~al~~v~~q~ll~~~ 173 (223)
+|+++-|+++++++++.+++
T Consensus 196 ~aa~~wa~~~il~~~~~~~~ 215 (358)
T PLN00411 196 IQGIFVSVSFILQAHIMSEY 215 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999987765
No 16
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.79 E-value=2.6e-07 Score=80.72 Aligned_cols=134 Identities=16% Similarity=0.131 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhh-hhhhhHhhhhhh-hhhhHHHHHHHhhhhHH
Q psy14361 25 PLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIA-SGLDVGFSQWGL-RSIAVSLYTMTKSTSVV 102 (223)
Q Consensus 25 P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~-~~~~i~l~N~sl-~~vsvs~~qm~Ks~~pi 102 (223)
|..++.+.++++.++........| +...++++ ++....+|+. .+....+-+.+. +++|++...++-.+.|+
T Consensus 36 p~~~~~~R~~~a~l~ll~~~~~~~------~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl 108 (292)
T PRK11272 36 PLMMAGVRFLIAGILLLAFLLLRG------HPLPTLRQ-WLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPL 108 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC------CCCCcHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 888888999988777655543211 11123343 4455567765 355667778888 99999999999999999
Q ss_pred HHHHHHHHhhccccchhhhhhhheecceeeeeeeeeec-CccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 103 FILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYK-ATAFNWLGFSLVLLASFSSGLRWTLAQFV 169 (223)
Q Consensus 103 ~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~-e~~~~~~G~~l~l~s~~~~al~~v~~q~l 169 (223)
++.+++.+ .|||++ ++.++++.+..+|+.+...+ +.+.+..|..+++++.++-|...+..+++
T Consensus 109 ~~~lla~~-~~e~~~---~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~ 172 (292)
T PRK11272 109 FTLCFSRL-FGIRTR---KLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRL 172 (292)
T ss_pred HHHHHHHH-hcccCc---hhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999986 599999 88889999999998776433 33556789999999999999988887775
No 17
>KOG2765|consensus
Probab=98.75 E-value=1.5e-07 Score=83.97 Aligned_cols=136 Identities=18% Similarity=0.088 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC
Q psy14361 62 NQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA 141 (223)
Q Consensus 62 ~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e 141 (223)
+..+.-+-++....+.....|.||.|.+|+-.+++-++.-.||+.++.++..||++ +.+.+++.+-++||.+.+.+|
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft---~sKllav~~si~GViiVt~~~ 233 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFT---LSKLLAVFVSIAGVIIVTMGD 233 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhh---HHHHHHHHHhhccEEEEEecc
Confidence 34444444555556677789999999999999999999999999999999999999 999999999999999998885
Q ss_pred c--------cccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHH
Q psy14361 142 T--------AFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIV 213 (223)
Q Consensus 142 ~--------~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~ 213 (223)
. +-...|-+++++|++.-|.+.++-++-..++| .+. |=-...-|+..+.++
T Consensus 234 s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg--------------------~rv-di~lffGfvGLfnll 292 (416)
T KOG2765|consen 234 SKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEG--------------------ERV-DIQLFFGFVGLFNLL 292 (416)
T ss_pred ccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhccccc--------------------ccc-cHHHHHHHHHHHHHH
Confidence 3 23489999999999999988877776655542 233 556677788999999
Q ss_pred HHHHHHHh
Q psy14361 214 SILPFAIL 221 (223)
Q Consensus 214 ~ll~~~~~ 221 (223)
.++|..++
T Consensus 293 llwP~l~i 300 (416)
T KOG2765|consen 293 LLWPPLII 300 (416)
T ss_pred HHhHHHHH
Confidence 98877654
No 18
>KOG1583|consensus
Probab=98.70 E-value=8.6e-09 Score=88.49 Aligned_cols=137 Identities=18% Similarity=0.197 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhh-hhHHHHHHHhhhhHHHHH
Q psy14361 27 SIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRS-IAVSLYTMTKSTSVVFIL 105 (223)
Q Consensus 27 ~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~-vsvs~~qm~Ks~~pi~v~ 105 (223)
.+|..|+++..+-..+.. .|... .++++|.|+|... ++. +....+++|.++++ +|++..-+.|+..++.++
T Consensus 35 LITFaqFlFia~eGlif~--skf~~--~k~kiplk~Y~i~---V~m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM 106 (330)
T KOG1583|consen 35 LITFAQFLFIATEGLIFT--SKFFT--VKPKIPLKDYAIT---VAM-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANM 106 (330)
T ss_pred ehHHHHHHHHHHhceeee--ccccc--cCCCCchhhhhee---hhe-eeeeeeeccceeeecccceEEEEEecCcHHHHH
Confidence 577788877666555432 23222 2466777776542 333 44455679999987 599999999999999999
Q ss_pred HHHHHhhccccchhhhhhhheecceeeeeeeeeecC---cc--------------cc--HHHHHHHHHHHHHHHHHHHHH
Q psy14361 106 IFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA---TA--------------FN--WLGFSLVLLASFSSGLRWTLA 166 (223)
Q Consensus 106 l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e---~~--------------~~--~~G~~l~l~s~~~~al~~v~~ 166 (223)
++++++.+||++ .+++.+++++++|+.+++... .. +. .+|+.+...+.+++|.-.+++
T Consensus 107 ~~g~il~~k~Ys---~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyq 183 (330)
T KOG1583|consen 107 ILGWILLGKRYS---LRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQ 183 (330)
T ss_pred HHHHHhccceee---hhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999877532 11 11 479999999999999999999
Q ss_pred HHHhcccc
Q psy14361 167 QFVMQRSD 174 (223)
Q Consensus 167 q~ll~~~~ 174 (223)
|..-+++|
T Consensus 184 E~~Y~kyG 191 (330)
T KOG1583|consen 184 ETTYQKYG 191 (330)
T ss_pred HHHHHHhc
Confidence 99988874
No 19
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.65 E-value=7.5e-07 Score=78.02 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=97.8
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhh-hhhhhHhhhhhhhh-hhHHHHHHHhhh
Q psy14361 22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIA-SGLDVGFSQWGLRS-IAVSLYTMTKST 99 (223)
Q Consensus 22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~-~~~~i~l~N~sl~~-vsvs~~qm~Ks~ 99 (223)
++ |..++.+-++++.+...... +. ++.++ +..+..++. ..+...+...+++| +|.+...++-++
T Consensus 30 ~~-p~~~~~~R~~~a~~~l~~~~---~~------~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~ 95 (299)
T PRK11453 30 MP-PLMLAGLRFMLVAFPAIFFV---AR------PKVPL----NLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQA 95 (299)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHh---cC------CCCch----HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHh
Confidence 44 88888888887654432221 11 11122 223344553 33444566778887 789999999999
Q ss_pred hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC---ccccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy14361 100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA---TAFNWLGFSLVLLASFSSGLRWTLAQFVMQR 172 (223)
Q Consensus 100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e---~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~ 172 (223)
.|+++.+++++++|||++ ++.++++++..+|+.+...++ .+.++.|..+++++.++-+.+.++++++.++
T Consensus 96 ~pi~~~ll~~~~l~e~~~---~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~ 168 (299)
T PRK11453 96 QAFFTIVLGAFTFGERLQ---GKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSH 168 (299)
T ss_pred HHHHHHHHHHHHhcCcCc---HHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999 888899999999998765432 2345689999999999999999999987544
No 20
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.63 E-value=4.9e-07 Score=77.25 Aligned_cols=138 Identities=11% Similarity=0.113 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcc--ccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHH
Q psy14361 25 PLSIVVCHLVFKFLVALICRKVYELYTH--QKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVV 102 (223)
Q Consensus 25 P~~lt~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi 102 (223)
|..++.+.++++.+.........+..+. ++.++.++++......-.|+..+.+..+-+.++++.+++...++-.+.|+
T Consensus 29 ~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi 108 (256)
T TIGR00688 29 ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPL 108 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHH
Confidence 7889989999887665443322221100 00011112222223444666777888899999999999999999999999
Q ss_pred HHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 103 FILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFV 169 (223)
Q Consensus 103 ~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~l 169 (223)
++++++.+++|||++ ++.++++.+..+|+.+....+.+.+ .+++++.++-+.+.+..++.
T Consensus 109 ~~~lla~~~l~Ek~~---~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~ 168 (256)
T TIGR00688 109 VMVALGRVFLKERIS---RFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKAL 168 (256)
T ss_pred HHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999 8888999999999876533222222 24566778888887777765
No 21
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.63 E-value=4.4e-07 Score=79.46 Aligned_cols=139 Identities=9% Similarity=0.118 Sum_probs=95.1
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhH
Q psy14361 22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSV 101 (223)
Q Consensus 22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~p 101 (223)
.+ |..++.++++++.+.........+..+..++...++++. ...+.-++..+....+-+.++++.|++...++-.+.|
T Consensus 33 ~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~P 110 (296)
T PRK15430 33 VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINP 110 (296)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 44 888999999998765544433222100000000122221 2222233457778889999999999999999999999
Q ss_pred HHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 102 VFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWLGFSLVLLASFSSGLRWTLAQFV 169 (223)
Q Consensus 102 i~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~G~~l~l~s~~~~al~~v~~q~l 169 (223)
++++++++++++||++ ++.++++++...|+.+....+.+.. .+.+++.++-|.+.+..++.
T Consensus 111 i~v~l~~~~~l~E~~~---~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~r~~ 171 (296)
T PRK15430 111 LVNIVLGMIFLGERFR---RMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFYGLVRKKI 171 (296)
T ss_pred HHHHHHHHHHhcCCCc---HHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999 8888999999999987543222222 34666777777777766664
No 22
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.59 E-value=1.2e-06 Score=76.64 Aligned_cols=137 Identities=12% Similarity=0.034 Sum_probs=98.1
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhh----hhHHHHHHHh
Q psy14361 22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRS----IAVSLYTMTK 97 (223)
Q Consensus 22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~----vsvs~~qm~K 97 (223)
++ |..++++-+..+.++..... +. + +.++. ..+..+..++..++...+.+.+++| .+.+...++-
T Consensus 30 ~~-P~~~~~~R~~~a~l~l~~~~---~~-~--~~~~~----~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~ 98 (295)
T PRK11689 30 LG-PVGGAAMIYSVSGLLLLLTV---GF-P--RLRQF----PKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVN 98 (295)
T ss_pred CC-hHHHHHHHHHHHHHHHHHHc---cc-c--ccccc----cHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHH
Confidence 44 88898888888766655432 11 1 11111 1233344455566777777777765 4566678889
Q ss_pred hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc-----------cccHHHHHHHHHHHHHHHHHHHHH
Q psy14361 98 STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT-----------AFNWLGFSLVLLASFSSGLRWTLA 166 (223)
Q Consensus 98 s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~-----------~~~~~G~~l~l~s~~~~al~~v~~ 166 (223)
++.|+++.++++++.+||++ +++++++++...|+.+...++. ..+..|.+++++|.++-|.+.++.
T Consensus 99 ~~~Pi~~~ll~~~~~~e~~~---~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~ 175 (295)
T PRK11689 99 YLWPSLTILFAVLFNGQKAN---WLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVT 175 (295)
T ss_pred HHhHHHHHHHHHHHhcCCcc---HHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 8888999999999977654432 123569999999999999999988
Q ss_pred HHHhcc
Q psy14361 167 QFVMQR 172 (223)
Q Consensus 167 q~ll~~ 172 (223)
+++.++
T Consensus 176 k~~~~~ 181 (295)
T PRK11689 176 RKYARG 181 (295)
T ss_pred hhccCC
Confidence 887433
No 23
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.47 E-value=8.7e-06 Score=71.16 Aligned_cols=133 Identities=12% Similarity=0.054 Sum_probs=93.2
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhH
Q psy14361 22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSV 101 (223)
Q Consensus 22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~p 101 (223)
++ |..+..+.++++.++.....+. . +.+.++++ ++..+..|++......+.+.+++|+|.+...++-.+.|
T Consensus 38 ~~-~~~~~~~R~~~a~l~l~~~~~~--~-----~~~~~~~~-~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~P 108 (293)
T PRK10532 38 VG-APGVTALRLALGTLILIAIFKP--W-----RLRFAKEQ-RLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGP 108 (293)
T ss_pred cC-HHHHHHHHHHHHHHHHHHHHhH--H-----hccCCHHH-HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 44 6778889998887766654321 1 11234443 34566678877777888899999999999999999999
Q ss_pred HHHHHHHHHhhccccchhhhhhhheecceeeeeeeeee-c--CccccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy14361 102 VFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY-K--ATAFNWLGFSLVLLASFSSGLRWTLAQFVMQR 172 (223)
Q Consensus 102 i~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~-~--e~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~ 172 (223)
+++++++. |+++ .... +.+...|+.+... + ..+.+..|.++++++.++-+.+.+..++..++
T Consensus 109 i~~~ll~~----~~~~---~~~~--~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~ 173 (293)
T PRK10532 109 LAVALFSS----RRPV---DFVW--VVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE 173 (293)
T ss_pred HHHHHHhc----CChH---HHHH--HHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99988762 5544 3333 3444677665432 1 23456789999999999999998888877443
No 24
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.44 E-value=3.2e-07 Score=68.69 Aligned_cols=107 Identities=21% Similarity=0.148 Sum_probs=82.1
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhh-hhhhhHhhhhhhhhhhHHHHHHHhhhh
Q psy14361 22 YKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIA-SGLDVGFSQWGLRSIAVSLYTMTKSTS 100 (223)
Q Consensus 22 F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~-~~~~i~l~N~sl~~vsvs~~qm~Ks~~ 100 (223)
++ |...+.++++.+.+ ........+.. +..+.+++++ ...+.+++. ..+...+.+.++++.+++...++..+.
T Consensus 17 ~~-~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (126)
T PF00892_consen 17 IS-PLSITFWRFLIAGI-LLILLLILGRK---PFKNLSPRQW-LWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLS 90 (126)
T ss_pred CC-HHHHHHHHHHHHHH-HHHHHHhhccc---cccCCChhhh-hhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHH
Confidence 44 77788899888886 44443332211 1234444443 445556665 688999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 101 VVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 101 pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
|+++.++++++++|+++ +++++++.++++|+.+.
T Consensus 91 pv~~~i~~~~~~~e~~~---~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 91 PVFAAILGWLFLGERPS---WRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHHHHHcCCCCC---HHHHHHHHHHHHHHHHH
Confidence 99999999999999999 88889999988887654
No 25
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.37 E-value=2.5e-05 Score=66.49 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=88.4
Q ss_pred HHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHH-HhhccccchhhhhhhheecceeeeeeeeeecCcc
Q psy14361 65 HKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSL-VFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143 (223)
Q Consensus 65 ~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~-~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~ 143 (223)
+..+.-++.......+-+.++++.+++..+.+.++.|+++.+++. ++++||++ ++++.++.....|+.+....+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~---~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 71 LLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLS---LLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCc---HHHHHHHHHHHHhHHheecCCCc
Confidence 344545557788888999999999999999999999999999996 77799999 88888899999999988776654
Q ss_pred c---cHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14361 144 F---NWLGFSLVLLASFSSGLRWTLAQFVM 170 (223)
Q Consensus 144 ~---~~~G~~l~l~s~~~~al~~v~~q~ll 170 (223)
. ...|..+++++.+..++..+..+++.
T Consensus 148 ~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 148 GGILSLLGLLLALAAALLWALYTALVKRLS 177 (292)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3 36899999999999999999888876
No 26
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.36 E-value=3.4e-06 Score=73.15 Aligned_cols=104 Identities=13% Similarity=0.004 Sum_probs=84.0
Q ss_pred HHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC-
Q psy14361 63 QLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA- 141 (223)
Q Consensus 63 ~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e- 141 (223)
++...+..++.......+.+.++++.|++....+-.+.|+++.++++++++|+++ ++.++++.++.+|+.+....+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~---~~~~~g~~~~~~Gv~ll~~~~~ 138 (281)
T TIGR03340 62 FWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLS---PLAWLGILIITLGLLVLGLSRF 138 (281)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHHHHHhcccc
Confidence 3444554555677888899999999999999999999999999999999999999 888899999999997654333
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 142 TAFNWLGFSLVLLASFSSGLRWTLAQFV 169 (223)
Q Consensus 142 ~~~~~~G~~l~l~s~~~~al~~v~~q~l 169 (223)
.+.+..|..+++++.++.+.+.+..++.
T Consensus 139 ~~~~~~g~~~~l~aal~~a~~~i~~k~~ 166 (281)
T TIGR03340 139 AQHRRKAYAWALAAALGTAIYSLSDKAA 166 (281)
T ss_pred cccchhHHHHHHHHHHHHHHhhhhcccc
Confidence 2355678888888888888877655443
No 27
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.30 E-value=2.3e-06 Score=67.04 Aligned_cols=58 Identities=31% Similarity=0.576 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361 148 GFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE 223 (223)
Q Consensus 148 G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E 223 (223)
|++++++|++++|+|+++.|++++++..+ +.+. |++++++|++|++++.++|.+++.|
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~-----------------~~~~-~~~~l~~~~~~~s~~~l~~~~~~~e 58 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSN-----------------SKKL-NPLNLLYYNSPISFIILLPLAFLLE 58 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccccc-----------------ccCC-CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999885211 2345 9999999999999999999999877
No 28
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.28 E-value=1.2e-06 Score=73.45 Aligned_cols=172 Identities=15% Similarity=0.107 Sum_probs=125.2
Q ss_pred CccccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHh
Q psy14361 18 YRWIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTK 97 (223)
Q Consensus 18 ~~~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~K 97 (223)
...+|+-...+-..|-.++.+...++.+ .|..+- | .++ .++..|+++.-...+..+.-||+|.+||.|++.|
T Consensus 30 s~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~f----R--~t~-aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFK 101 (309)
T COG5070 30 SNLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEF----R--LTK-AKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFK 101 (309)
T ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhhe----e--hhh-hhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhc
Confidence 3467887778888999988777666543 354331 1 222 4566899999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcccc-------HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14361 98 STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFN-------WLGFSLVLLASFSSGLRWTLAQFVM 170 (223)
Q Consensus 98 s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~-------~~G~~l~l~s~~~~al~~v~~q~ll 170 (223)
-++.+.++.....+++++.. -....+..+++..-.++..+|.+-. -.|.+.+...++.++..-....+-.
T Consensus 102 NltII~iAygEvl~Fgg~vt---sl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri 178 (309)
T COG5070 102 NLTIILIAYGEVLFFGGRVT---SLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRI 178 (309)
T ss_pred cceeehhHhhHHHHhcCccc---hhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhh
Confidence 99999999999998888887 6667777777666666777886321 2477777777776665433333322
Q ss_pred cccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHHHHHHHHHHHHhcC
Q psy14361 171 QRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPWMIVSILPFAILFE 223 (223)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~s~~~ll~~~~~~E 223 (223)
+-. ...-.+.+||-...+.=.|+.+.+++|
T Consensus 179 ~lt-----------------------Nf~d~dtmfYnNllslPiL~~~s~~~e 208 (309)
T COG5070 179 KLT-----------------------NFKDFDTMFYNNLLSLPILLSFSFLFE 208 (309)
T ss_pred ccc-----------------------ccchhhHHHHhhhHHHHHHHHHHHHhc
Confidence 221 114478899988888888888888776
No 29
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.28 E-value=1.1e-06 Score=66.35 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=63.4
Q ss_pred HHHHHHhhh-hhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcc
Q psy14361 66 KIAPTGIAS-GLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143 (223)
Q Consensus 66 ~~lplsi~~-~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~ 143 (223)
..+..|+.. ..+..+-+.|+++.| +....+.++.|+++++++.++++||++ ++.++++.++.+|+.+...+|.+
T Consensus 36 ~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~---~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 36 WLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLS---PRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHHHHHhhhhcc
Confidence 344456654 478889999999999 688899999999999999999999999 88889999999999987776643
No 30
>KOG2234|consensus
Probab=98.17 E-value=2.1e-05 Score=70.00 Aligned_cols=131 Identities=18% Similarity=0.260 Sum_probs=103.3
Q ss_pred HHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecC
Q psy14361 62 NQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKA 141 (223)
Q Consensus 62 ~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e 141 (223)
+..+..+| ++.|++..-+...++.+.+.++||+.--.....|+++.+++++||.+ ++.+.++++...|+++.-.++
T Consensus 91 ~~lk~~vP-a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs---~~Qw~Al~lL~~Gv~~vQ~~~ 166 (345)
T KOG2234|consen 91 ETLKVSVP-ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLS---RLQWMALVLLFAGVALVQLPS 166 (345)
T ss_pred HHHHHHHH-HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHHHHHHHhccC
Confidence 44555555 44666666688899999999999999999999999999999999999 777799999999998765211
Q ss_pred -----------ccccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHhhhhcccCCCCChHHHHHHHhHH
Q psy14361 142 -----------TAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDLNMNSKIIIIITQFVMQRSDLNMNSPIDMVYHVQPW 210 (223)
Q Consensus 142 -----------~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~y~sp~ 210 (223)
.+-.+.|+...+.+++.+|+-.++-|+++++.+.. .-+ ..+++..+-.+.
T Consensus 167 ~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s------------------~wi-~NiqL~~~g~~f 227 (345)
T KOG2234|consen 167 LSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVS------------------LWI-RNIQLYFFGILF 227 (345)
T ss_pred CCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCch------------------HHH-HHHHHHHHHHHH
Confidence 12358999999999999999999999999887322 112 557777777766
Q ss_pred HHHHH
Q psy14361 211 MIVSI 215 (223)
Q Consensus 211 s~~~l 215 (223)
+++.+
T Consensus 228 ~~l~~ 232 (345)
T KOG2234|consen 228 NLLTI 232 (345)
T ss_pred HHHHH
Confidence 66554
No 31
>KOG4314|consensus
Probab=97.99 E-value=1.9e-05 Score=65.38 Aligned_cols=116 Identities=15% Similarity=0.122 Sum_probs=101.8
Q ss_pred ccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361 57 LLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM 136 (223)
Q Consensus 57 ~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l 136 (223)
....|.+.++..|+++...+....--.+|+.++.|-..-+-+|.-.|+.+++++.+++++. -.+.++..+-+.|+++
T Consensus 46 G~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~---~~kIlaailAI~GiVm 122 (290)
T KOG4314|consen 46 GFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFM---GFKILAAILAIGGIVM 122 (290)
T ss_pred CceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchh---hhhHHHHHHHhCcEEE
Confidence 3444556677899999998888888899999999999999999999999999999999998 7788999999999999
Q ss_pred eeecC--ccccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy14361 137 FTYKA--TAFNWLGFSLVLLASFSSGLRWTLAQFVMQRSDL 175 (223)
Q Consensus 137 ~~~~e--~~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~~~ 175 (223)
.+|-| ...+++|+.++..|.++++++-+.-+..+++.+.
T Consensus 123 iay~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~ 163 (290)
T KOG4314|consen 123 IAYADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANF 163 (290)
T ss_pred EEeccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 88755 4568999999999999999999999988877643
No 32
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.61 E-value=0.0019 Score=56.52 Aligned_cols=96 Identities=16% Similarity=0.019 Sum_probs=76.4
Q ss_pred HhhhhhhhHhhhhhhhhhhHHHHHHHhh-hhHHHHHHHHHHhhccccchhhhhh----hheecceeeeeeeeeecCcc--
Q psy14361 71 GIASGLDVGFSQWGLRSIAVSLYTMTKS-TSVVFILIFSLVFQLEKKSRKRLRL----YGESNPGTSGLVMFTYKATA-- 143 (223)
Q Consensus 71 si~~~~~i~l~N~sl~~vsvs~~qm~Ks-~~pi~v~l~~~~~~~e~~s~~~~~~----~~~l~~i~~Gv~l~~~~e~~-- 143 (223)
|+..+....+...+.++..++....+-. ..++++.+++.++++|+.+ .+. .+++++++.|+.+.+..+.+
T Consensus 66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t---~~~~~~~~~g~~l~l~G~~l~~~~~~~~~ 142 (290)
T TIGR00776 66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWST---SIQTLLGLLALILIIIGVYLTSRSKDKSA 142 (290)
T ss_pred HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccc---hHHHHHHHHHHHHHHHhHheEEecccccc
Confidence 3335556677788889999999988877 7777889999999999998 555 88899999999887653321
Q ss_pred -----cc-HHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 144 -----FN-WLGFSLVLLASFSSGLRWTLAQFV 169 (223)
Q Consensus 144 -----~~-~~G~~l~l~s~~~~al~~v~~q~l 169 (223)
.+ ..|+..+++|.+.-+.+.+..+.+
T Consensus 143 ~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~ 174 (290)
T TIGR00776 143 GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF 174 (290)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 33 789999999999999888877754
No 33
>KOG2766|consensus
Probab=97.52 E-value=0.00013 Score=62.59 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=96.6
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh
Q psy14361 20 WIYKYPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST 99 (223)
Q Consensus 20 ~~F~~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~ 99 (223)
.+.+-|..+|.+....-+++=-.+.. +|. +..+..| +..+.+|+.-.-...+--.+++|.+..-.+.+-+-
T Consensus 43 k~iN~Pt~QtFl~Y~LLalVY~~~~~-fR~----~~~~~~~----~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcw 113 (336)
T KOG2766|consen 43 KGINAPTSQTFLNYVLLALVYGPIML-FRR----KYIKAKW----RHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCW 113 (336)
T ss_pred ccCCCccHHHHHHHHHHHHHHhhHHH-hhh----HHHHHHH----HHhhheeEEeecccEEEeeehhhcchHHHHHHHHh
Confidence 34677888776655443332221111 111 1122223 33444666555444455689999999999999999
Q ss_pred hHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcc--------ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy14361 100 SVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA--------FNWLGFSLVLLASFSSGLRWTLAQFVMQ 171 (223)
Q Consensus 100 ~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~--------~~~~G~~l~l~s~~~~al~~v~~q~ll~ 171 (223)
..+.+++++++|++.|++ +.+...+++.++||.+....|.. -...|-.++++++-+-|..++.+|.+.+
T Consensus 114 aip~v~~lsw~fLktrYr---lmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk 190 (336)
T KOG2766|consen 114 AIPCVLVLSWFFLKTRYR---LMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK 190 (336)
T ss_pred hhHHHHHHHHHHHHHHHh---hheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh
Confidence 999999999999999988 99999999999999987765531 2246777777777777777777777665
Q ss_pred cc
Q psy14361 172 RS 173 (223)
Q Consensus 172 ~~ 173 (223)
+.
T Consensus 191 n~ 192 (336)
T KOG2766|consen 191 NA 192 (336)
T ss_pred cC
Confidence 54
No 34
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.44 E-value=0.00061 Score=51.41 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=57.8
Q ss_pred hhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 72 IASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 72 i~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
+++.++..+--.+++.+|+|....+-+..++++.+.++++++|+++ +++.+.+.++++|+.+.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls---~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVS---PRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHH
Confidence 3577788899999999999999999999999999999999999999 99999999999998654
No 35
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.34 E-value=0.0012 Score=55.97 Aligned_cols=100 Identities=14% Similarity=0.015 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhh-hhhhhHhhhhhhhhhhHHHHHHHhhhhHHHH
Q psy14361 26 LSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIA-SGLDVGFSQWGLRSIAVSLYTMTKSTSVVFI 104 (223)
Q Consensus 26 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~-~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v 104 (223)
...+.+++.++.+.........+ +....+++++ ..++-++++ ......+-+.++++.+++.......+.|++.
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~ 232 (260)
T TIGR00950 159 LQFTGWVLLLGALLLLPFAWFLG-----PNPQALSLQW-GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVA 232 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-----CCCCcchHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 34454677777666655443211 1122234333 234445553 5677778999999999999999999999999
Q ss_pred HHHHHHhhccccchhhhhhhheecceeeee
Q psy14361 105 LIFSLVFQLEKKSRKRLRLYGESNPGTSGL 134 (223)
Q Consensus 105 ~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv 134 (223)
+++++++++|+++ ...+.+..++..|+
T Consensus 233 ~ll~~~~~~E~~~---~~~~~G~~li~~g~ 259 (260)
T TIGR00950 233 LLLGLLILGETLS---LPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHhCCCCC---HHHHHHHHHHHHhc
Confidence 9999999999999 88888888888776
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.29 E-value=0.00036 Score=53.83 Aligned_cols=109 Identities=18% Similarity=0.120 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHH
Q psy14361 25 PLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFI 104 (223)
Q Consensus 25 P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v 104 (223)
|.+-|.+--.+..+++.......+..+ ...+++.|. +..+..-|+..+++-.+=..+++--.+|-..-+-.+.|+++
T Consensus 31 p~~At~IRtiVi~~~l~~v~~~~g~~~--~~~~~~~k~-~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~ 107 (140)
T COG2510 31 PDFATTIRTIVILIFLLIVLLVTGNWQ--AGGEIGPKS-WLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLA 107 (140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCcee--cccccCcce-ehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHH
Confidence 667777777777666666554433322 122344443 34445466778888888889999999998888899999999
Q ss_pred HHHHHHhhccccchhhhhhhheecceeeeeeeeee
Q psy14361 105 LIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY 139 (223)
Q Consensus 105 ~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~ 139 (223)
+++++++++||++ .+.++.+.+|+.|+.+.+.
T Consensus 108 ~lls~lfL~E~ls---~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 108 VLLSILFLGERLS---LPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHhcCCCC---HHHHHHHHHHHhCeeeEec
Confidence 9999999999999 9999999999999988653
No 37
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=96.96 E-value=0.002 Score=58.24 Aligned_cols=67 Identities=15% Similarity=0.168 Sum_probs=53.5
Q ss_pred HHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361 67 IAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM 136 (223)
Q Consensus 67 ~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l 136 (223)
++-.+++.++...+-|.++++.+.+...+.-...|++.+++++++++|+++ +..++..++|..|+.+
T Consensus 259 i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt---~~~~iG~~LIl~Gv~l 325 (358)
T PLN00411 259 IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLY---LGCLIGGILITLGFYA 325 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCc---HHHHHHHHHHHHHHHH
Confidence 333455555566689999999999999999999999999999999999999 8666655555555444
No 38
>KOG4510|consensus
Probab=96.84 E-value=0.0014 Score=56.68 Aligned_cols=95 Identities=16% Similarity=0.164 Sum_probs=73.6
Q ss_pred HhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee-----ecCc---
Q psy14361 71 GIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT-----YKAT--- 142 (223)
Q Consensus 71 si~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~-----~~e~--- 142 (223)
|+.....+.+...|++|.|.+=..++-.++|+|+.+++++++||+++ ....+...+...||.+.. .||.
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t---~~eaL~s~itl~GVVLIvRPpFlFG~~t~g 180 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFT---KFEALGSLITLLGVVLIVRPPFLFGDTTEG 180 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCc---HHHHHHHHHhhheEEEEecCCcccCCCccc
Confidence 55555677789999999999999999999999999999999999999 666677777778887743 3432
Q ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 143 ------AFNWLGFSLVLLASFSSGLRWTLAQF 168 (223)
Q Consensus 143 ------~~~~~G~~l~l~s~~~~al~~v~~q~ 168 (223)
+.+..|...++.|.+..+--++.-.+
T Consensus 181 ~~~s~~~~~~~gt~aai~s~lf~asvyIilR~ 212 (346)
T KOG4510|consen 181 EDSSQVEYDIPGTVAAISSVLFGASVYIILRY 212 (346)
T ss_pred cccccccccCCchHHHHHhHhhhhhHHHHHHH
Confidence 24567888888887777655444433
No 39
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=96.74 E-value=0.0045 Score=53.98 Aligned_cols=109 Identities=13% Similarity=0.023 Sum_probs=76.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHH
Q psy14361 24 YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVV 102 (223)
Q Consensus 24 ~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi 102 (223)
.|...+.+++.++............. ......+.+. +..++-+++ ...+...+-+.++++.+.+...+.-...|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi 251 (292)
T PRK11272 176 VGMMAGAAEMLAAGVVLLIASLLSGE---RLTALPTLSG-FLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPV 251 (292)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHcCC---cccccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 35556678888876665554322110 0011123333 334455566 356677789999999999999999999999
Q ss_pred HHHHHHHHhhccccchhhhhhhheecceeeeeeeeee
Q psy14361 103 FILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY 139 (223)
Q Consensus 103 ~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~ 139 (223)
+.+++++++++|+++ +..+++..++..|+.+...
T Consensus 252 ~a~i~~~~~l~E~~t---~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 252 VAVLLGTGLGGETLS---PIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHcCCCCc---HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 8888888888877765443
No 40
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.65 E-value=0.0026 Score=53.20 Aligned_cols=83 Identities=18% Similarity=0.156 Sum_probs=68.3
Q ss_pred hhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc-------------------------
Q psy14361 88 IAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT------------------------- 142 (223)
Q Consensus 88 vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~------------------------- 142 (223)
+++|.....|+..++++++..+.+.+|+++ ..++++.++++.|+.....+|.
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~---~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~ 78 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT---QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTL 78 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeee---hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccc
Confidence 578899999999999999999999999999 8888888888888764222211
Q ss_pred --cccHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy14361 143 --AFNWLGFSLVLLASFSSGLRWTLAQFVMQRS 173 (223)
Q Consensus 143 --~~~~~G~~l~l~s~~~~al~~v~~q~ll~~~ 173 (223)
...+.|....+.+.+.+++..+++|+.++++
T Consensus 79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~ 111 (222)
T TIGR00803 79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDG 111 (222)
T ss_pred ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence 2357889999999999999999999886654
No 41
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=96.25 E-value=0.028 Score=43.69 Aligned_cols=73 Identities=11% Similarity=0.096 Sum_probs=62.9
Q ss_pred HHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee
Q psy14361 63 QLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT 138 (223)
Q Consensus 63 ~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~ 138 (223)
....++..++...+....+...+++.|.-+++++...+.+++.++++++++|+++ +..+.++.+..+|+.+-+
T Consensus 80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t---~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPIT---PLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCC---HHHHHHHHHHHHHHheee
Confidence 4455555666777777789999999999999999999999999999999999999 988899999888887654
No 42
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=95.88 E-value=0.0082 Score=46.53 Aligned_cols=69 Identities=16% Similarity=0.050 Sum_probs=59.9
Q ss_pred HHHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHH--hhccccchhhhhhhheecceeeeeeeeee
Q psy14361 68 APTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLV--FQLEKKSRKRLRLYGESNPGTSGLVMFTY 139 (223)
Q Consensus 68 lplsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~--~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~ 139 (223)
+.+|+ +++++..+-+.+++.+|+|...-.-+..++.+.+.++. +++|+.+ +.+++.+.+|++|+.+...
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls---~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFS---LKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCC---HHHHHHHHHHHHHHHHhcc
Confidence 33666 68889999999999999999999888888888888874 8999999 9999999999999987654
No 43
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=95.73 E-value=0.008 Score=52.03 Aligned_cols=67 Identities=21% Similarity=0.301 Sum_probs=57.5
Q ss_pred HHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361 67 IAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM 136 (223)
Q Consensus 67 ~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l 136 (223)
+...++...+...+-+.++++.+.+........+|++..++++++++|+++ +..++...++..|+.+
T Consensus 214 ~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~---~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 214 ATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWY---LTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCcc---HHHHHHHHHHHHhHHh
Confidence 333444566778889999999999999999999999999999999999999 8888989888888754
No 44
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.45 E-value=0.016 Score=44.42 Aligned_cols=65 Identities=20% Similarity=0.283 Sum_probs=57.4
Q ss_pred HHhhhhhhhHhhhhhhhhhhHHHHHHH-hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 70 TGIASGLDVGFSQWGLRSIAVSLYTMT-KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 70 lsi~~~~~i~l~N~sl~~vsvs~~qm~-Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
.-++++++..+-..+++++|++...-+ .+.-.+.+.+.++++++|+++ +.+.+.+.+|++|+...
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s---~~~~~gi~lIi~GVi~l 101 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLS---LMKIAGLTTLVAGIVLI 101 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHh
Confidence 455788899999999999999987776 578899999999999999999 99999999999998664
No 45
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=95.26 E-value=0.1 Score=45.51 Aligned_cols=60 Identities=12% Similarity=0.099 Sum_probs=49.0
Q ss_pred HHHHHhh-hhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecc
Q psy14361 67 IAPTGIA-SGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNP 129 (223)
Q Consensus 67 ~lplsi~-~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~ 129 (223)
.+-++++ ..+...+-|.++++.+.+...+.-..+|++..++++++++|+++ +..++...+
T Consensus 211 ~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~---~~~~iG~~l 271 (293)
T PRK10532 211 GLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLT---LIQWLALGA 271 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCc---HHHHHHHHH
Confidence 3456663 56677788999999999999999999999999999999999998 644443333
No 46
>PRK11689 aromatic amino acid exporter; Provisional
Probab=94.91 E-value=0.033 Score=48.63 Aligned_cols=76 Identities=12% Similarity=0.089 Sum_probs=61.7
Q ss_pred cchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 58 LCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 58 ~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
.+++.+ -.++-.++...+...+-|.++++.+.+...+.-...|++.+++++++.+|+++ +..++..++|.+|+.+.
T Consensus 210 ~~~~~~-~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~---~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 210 FSLPAI-IKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLS---FSFWQGVAMVTAGSLLC 285 (295)
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCc---HHHHHHHHHHHHhHHHH
Confidence 344433 33444556666777889999999999999999999999999999999999999 88888888888877554
No 47
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=94.89 E-value=0.36 Score=42.28 Aligned_cols=84 Identities=18% Similarity=0.166 Sum_probs=59.6
Q ss_pred hhhhhhHhhhhhhhhhhHHHHHHHh-----hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCccccHH
Q psy14361 73 ASGLDVGFSQWGLRSIAVSLYTMTK-----STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATAFNWL 147 (223)
Q Consensus 73 ~~~~~i~l~N~sl~~vsvs~~qm~K-----s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~~~~~ 147 (223)
..+.-...+|+.+--=.+.--+++- ...|.+.++++.+|+|||++ +...+++++-.+||..-...-.+++|.
T Consensus 76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls---~~Q~iAV~lA~~GV~~~~~~~g~lpwv 152 (293)
T COG2962 76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLS---RLQWIAVGLAAAGVLIQTWLLGSLPWV 152 (293)
T ss_pred HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHcCCCcHH
Confidence 3344445566665433333333333 45899999999999999999 667799999999998876666788999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy14361 148 GFSLVLLASFSSGLRW 163 (223)
Q Consensus 148 G~~l~l~s~~~~al~~ 163 (223)
.+.++ +.-+++.
T Consensus 153 al~la----~sf~~Yg 164 (293)
T COG2962 153 ALALA----LSFGLYG 164 (293)
T ss_pred HHHHH----HHHHHHH
Confidence 88887 4444544
No 48
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.83 E-value=0.21 Score=44.06 Aligned_cols=70 Identities=20% Similarity=0.054 Sum_probs=58.9
Q ss_pred HHHHHHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 65 HKIAPTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 65 ~~~lplsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
+....+|+ .++++-+++-.||.+.|.+..|-+-+...++.++++..+.+||++ ++.+.++..++.|..+.
T Consensus 50 ~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~---~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 50 RPLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLT---RRDIVGCALIILGSVLI 120 (300)
T ss_pred hHHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccch---HhHHhhHHHHHhhheee
Confidence 34455666 466777888999999999999999999999999999999999999 77778888888887653
No 49
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=94.57 E-value=0.15 Score=44.52 Aligned_cols=71 Identities=11% Similarity=-0.098 Sum_probs=55.6
Q ss_pred HHHHHHHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 64 LHKIAPTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 64 ~~~~lplsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
+..++-+++ ...+...+-+.++++.+.+...++-..+|++..++++++++|+++ +..++...+++.|+.+.
T Consensus 214 ~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~---~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 214 ILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLT---GLQFLGAVLIMAGLYIN 285 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCcc---HHHHHHHHHHHHHHHHH
Confidence 344444554 455677788889999999999999999999999999999999999 77666666666666543
No 50
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=94.33 E-value=0.17 Score=38.14 Aligned_cols=65 Identities=17% Similarity=0.042 Sum_probs=56.5
Q ss_pred HHhhhhhhhHhhhhhhhhhhHHHHHHHhh-hhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 70 TGIASGLDVGFSQWGLRSIAVSLYTMTKS-TSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 70 lsi~~~~~i~l~N~sl~~vsvs~~qm~Ks-~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
.-+++.++..+-..+++.+|+|...-+-+ ...+.+.+.++++++|+.+ +.+.+.+.+|++|+...
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~---~~~~~gi~lIi~GVi~l 101 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD---LPAIIGMMLICAGVLVI 101 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHHH
Confidence 34478888888899999999999888865 6788889999999999999 99999999999998764
No 51
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=94.27 E-value=1 Score=39.00 Aligned_cols=127 Identities=14% Similarity=0.082 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHH
Q psy14361 26 LSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFIL 105 (223)
Q Consensus 26 ~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~ 105 (223)
.-.|++...++.++...++|= . +.+.++++ ++.++..|++-+....+=+.|+..+|.+....+..+-|+.+.
T Consensus 41 ~g~t~lRl~~aaLIll~l~RP---w----r~r~~~~~-~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA 112 (292)
T COG5006 41 AGVTALRLAIAALILLALFRP---W----RRRLSKPQ-RLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVA 112 (292)
T ss_pred hhHHHHHHHHHHHHHHHHhhH---H----HhccChhh-hHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHH
Confidence 345556666655555544331 1 23445553 567777888888877888899999999999999999999887
Q ss_pred HHHHHhhccccchhhhhhhheecceeeeeeeeee-c--CccccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 106 IFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTY-K--ATAFNWLGFSLVLLASFSSGLRWTLAQFV 169 (223)
Q Consensus 106 l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~-~--e~~~~~~G~~l~l~s~~~~al~~v~~q~l 169 (223)
+++ .||.+ ....+.+...|+.+-.. + -.+.|..|..+++.+-.+=+.|-+..|+.
T Consensus 113 ~~~----sRr~~-----d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~ 170 (292)
T COG5006 113 LLS----SRRLR-----DFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRA 170 (292)
T ss_pred HHh----ccchh-----hHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchh
Confidence 653 44443 22334444455543322 2 24689999999998888888776666655
No 52
>PRK11431 multidrug efflux system protein; Provisional
Probab=93.91 E-value=0.079 Score=39.60 Aligned_cols=65 Identities=17% Similarity=0.105 Sum_probs=55.5
Q ss_pred HHhhhhhhhHhhhhhhhhhhHHHHHHHhh-hhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 70 TGIASGLDVGFSQWGLRSIAVSLYTMTKS-TSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 70 lsi~~~~~i~l~N~sl~~vsvs~~qm~Ks-~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
.-++++.+..+-..+++.+|++..--+=+ .-.+.+.+.++++++|+.+ +.+.+.+.++++|+...
T Consensus 35 ~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~---~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 35 TVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESAS---PARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHHHHHhh
Confidence 44578888889999999999998665544 6778899999999999999 99999999999998764
No 53
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=93.63 E-value=0.24 Score=37.12 Aligned_cols=64 Identities=16% Similarity=0.087 Sum_probs=54.3
Q ss_pred HHhhhhhhhHhhhhhhhhhhHHHHHHH-hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361 70 TGIASGLDVGFSQWGLRSIAVSLYTMT-KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM 136 (223)
Q Consensus 70 lsi~~~~~i~l~N~sl~~vsvs~~qm~-Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l 136 (223)
.-+++..+..+--.+++.+|++..--+ -..-.+.+.+.++++++|+.+ ..+.+++.+++.|+..
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~---~~~~~gl~LiiaGvi~ 100 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS---LIKLLGLALILAGVIG 100 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC---HHHHHHHHHHHHHHHH
Confidence 445788888899999999999985544 456777899999999999999 9999999999999865
No 54
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=93.61 E-value=0.065 Score=46.76 Aligned_cols=65 Identities=11% Similarity=0.044 Sum_probs=52.7
Q ss_pred HHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeee
Q psy14361 67 IAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGL 134 (223)
Q Consensus 67 ~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv 134 (223)
++..++.......+-|.++++.+.+.....-...|++..++++++++|+++ +..+.....|..|+
T Consensus 216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~---~~~~~G~~lI~~~~ 280 (296)
T PRK15430 216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPG---ADKMVTFAFIWVAL 280 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHH
Confidence 343555666778899999999999999999999999999999999999999 76555555554333
No 55
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=93.35 E-value=0.14 Score=38.49 Aligned_cols=64 Identities=11% Similarity=-0.037 Sum_probs=54.2
Q ss_pred HHhhhhhhhHhhhhhhhhhhHHHHHHHh-hhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361 70 TGIASGLDVGFSQWGLRSIAVSLYTMTK-STSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM 136 (223)
Q Consensus 70 lsi~~~~~i~l~N~sl~~vsvs~~qm~K-s~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l 136 (223)
.-++++++..+-..+++.+|++..--+= +.-.+.+.+.++++++|+.+ +.+.+.+.++++|+..
T Consensus 41 ~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~---~~~~~gi~lIi~GVi~ 105 (109)
T PRK10650 41 SLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLN---RKGWIGLVLLLAGMVM 105 (109)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCC---HHHHHHHHHHHHHHHH
Confidence 4456778888999999999999866554 46778889999999999999 9999999999999864
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=93.16 E-value=0.068 Score=46.63 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=40.6
Q ss_pred HhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeee
Q psy14361 79 GFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGL 134 (223)
Q Consensus 79 ~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv 134 (223)
.+.+.++++.+.+.+.+.-...|++++++++++.+|+++ +..++...++.+|+
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt---~~~~~G~~lil~Gv 288 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKIS---PQQVFGTGIAIAGV 288 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCc---hhHHHHHHHHHHHH
Confidence 455578899999999999889999999999999999988 65444444444444
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=92.51 E-value=0.52 Score=42.31 Aligned_cols=61 Identities=15% Similarity=0.132 Sum_probs=51.5
Q ss_pred hhhhhhHhhh----hhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361 73 ASGLDVGFSQ----WGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM 136 (223)
Q Consensus 73 ~~~~~i~l~N----~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l 136 (223)
..++...+.| .+++.++...+.+.-...|+++.++++++++|+++ +..++..+++++|+.+
T Consensus 281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt---~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVT---LLGYLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCc---hHhHHHHHHHHHHHHH
Confidence 3444445556 59999999999999999999999999999999999 8888888888888755
No 58
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=92.06 E-value=0.19 Score=38.04 Aligned_cols=70 Identities=21% Similarity=0.100 Sum_probs=55.6
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHH-hhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 64 LHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMT-KSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 64 ~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~-Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
++..+|+.+=.++++.+ +..+...++|...-+ .+++=+||++.++++++|..+ ++.++.+.+++.|+.+.
T Consensus 42 ~~y~ipf~lNq~GSv~f-~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~---~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLF-FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVIS---RRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccc---hhHHHHHHHHHcCeeee
Confidence 45667776655555553 566777788877766 599999999999999999988 88899999999999874
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=91.53 E-value=0.44 Score=41.60 Aligned_cols=64 Identities=14% Similarity=0.053 Sum_probs=49.4
Q ss_pred HHhhhhhhhHhhhhhhh-hhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhh----heecceeeeeee
Q psy14361 70 TGIASGLDVGFSQWGLR-SIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLY----GESNPGTSGLVM 136 (223)
Q Consensus 70 lsi~~~~~i~l~N~sl~-~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~----~~l~~i~~Gv~l 136 (223)
.|+.......+-..+++ +++++.+.++-...|+...+.++++.+|+.+ ++.+ +..+++.+|+.+
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~---~~~~~~~~iG~~lIi~~~~l 285 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKT---KREMIAISVGIILIIIAANI 285 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCC---cceeehhHHHHHHHHHHHHH
Confidence 66666666666667778 9999999999999999999999999999998 5443 445555555443
No 60
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=91.49 E-value=0.26 Score=35.77 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=32.2
Q ss_pred hhhhhhHhhhhhhhhhhHHHHH-HHhhhhHHHHHHHHHHhhccccchhhhhhhheecc
Q psy14361 73 ASGLDVGFSQWGLRSIAVSLYT-MTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNP 129 (223)
Q Consensus 73 ~~~~~i~l~N~sl~~vsvs~~q-m~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~ 129 (223)
+++++..+-..+++.+|+|..- +-.+...+.+.+.+.++++|+.+ +.+.+.+.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s---~~~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLS---LSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH-----------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHHHhheee
Confidence 7888889999999999999875 45678999999999999999999 777666544
No 61
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=91.35 E-value=4.2 Score=35.44 Aligned_cols=101 Identities=11% Similarity=0.006 Sum_probs=73.7
Q ss_pred HHHHHhhhhhhhHhhhhhhhhhhHHHHHHHh-hhhHHHHHHHHHHhhccccchhhhh-hhheecceeeeeeeeeecCccc
Q psy14361 67 IAPTGIASGLDVGFSQWGLRSIAVSLYTMTK-STSVVFILIFSLVFQLEKKSRKRLR-LYGESNPGTSGLVMFTYKATAF 144 (223)
Q Consensus 67 ~lplsi~~~~~i~l~N~sl~~vsvs~~qm~K-s~~pi~v~l~~~~~~~e~~s~~~~~-~~~~l~~i~~Gv~l~~~~e~~~ 144 (223)
-+..|++.++.-.+...|++++.||-.-=+- ....+.+.++++++++|-.+..++. -.++++++++|+.+.++.|.+-
T Consensus 48 ~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~ 127 (269)
T PF06800_consen 48 AFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS 127 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence 3447888888888999999998887655444 4455668889999999976622232 2568899999999998866422
Q ss_pred --------cHHHHHHHHHHHHHHHHHHHHHH
Q psy14361 145 --------NWLGFSLVLLASFSSGLRWTLAQ 167 (223)
Q Consensus 145 --------~~~G~~l~l~s~~~~al~~v~~q 167 (223)
...|+...++|.+.-..+.++.+
T Consensus 128 ~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 128 DKSSSKSNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 25689999888887777666544
No 62
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=87.63 E-value=0.67 Score=39.06 Aligned_cols=72 Identities=17% Similarity=0.118 Sum_probs=59.1
Q ss_pred HHHHHHHHhhhh-hhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeee
Q psy14361 64 LHKIAPTGIASG-LDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFT 138 (223)
Q Consensus 64 ~~~~lplsi~~~-~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~ 138 (223)
+......++... ....+-+.+++..+.+...+.-...|++.+++++++.+|+++ ....+...+++.|+.+..
T Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~---~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLS---PAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCc---HHHHHHHHHHHHHHHHHh
Confidence 444555666544 577888999999999999999999999999999999999999 877777777777776543
No 63
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=82.91 E-value=2.4 Score=38.12 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=50.5
Q ss_pred hhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCc
Q psy14361 80 FSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKAT 142 (223)
Q Consensus 80 l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~ 142 (223)
+.+..+++-+..+..+-=.++.++.+++++++++++++ |..+++.++|++|+.+....|.
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~---~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFS---WLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCcccc---HHHHHHHHHHHHHhheEEccCC
Confidence 55667777777777777788899999999999999999 9888999999999998876654
No 64
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=82.71 E-value=1.8 Score=35.94 Aligned_cols=62 Identities=10% Similarity=-0.105 Sum_probs=52.7
Q ss_pred hhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeee
Q psy14361 72 IASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVM 136 (223)
Q Consensus 72 i~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l 136 (223)
+..+..-.+-+..++|.+.....++-++.++++.++++++++++++ ...+++..++..|+.+
T Consensus 160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls---~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKIS---STFYLGAILVFLATFL 221 (222)
T ss_pred HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---HHHHHHHHHHHeeeEe
Confidence 3444555577888999999999999999999999999999999999 8888888888888754
No 65
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=81.15 E-value=2.8 Score=36.50 Aligned_cols=70 Identities=19% Similarity=0.084 Sum_probs=50.8
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhh-hhheecceeeee
Q psy14361 64 LHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLR-LYGESNPGTSGL 134 (223)
Q Consensus 64 ~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~-~~~~l~~i~~Gv 134 (223)
++.++ -|+.++....+.-+|-+.+-+...-.+..+.++...+-+.+++||+-+++++. ..+.+.++++|.
T Consensus 196 ~~nil-~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~ 266 (269)
T PF06800_consen 196 WKNIL-TGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA 266 (269)
T ss_pred HHhhH-HHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence 34444 67778877777777878887777777777889999999999999998855554 345555555554
No 66
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=74.59 E-value=11 Score=32.88 Aligned_cols=67 Identities=9% Similarity=0.021 Sum_probs=39.1
Q ss_pred HHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeee
Q psy14361 65 HKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGL 134 (223)
Q Consensus 65 ~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv 134 (223)
..++..+++......+-+...+..+.-...++..+--++++++++++++++++ +..+.+++++..|.
T Consensus 226 ~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~---~~~~~G~~lv~~g~ 292 (303)
T PF08449_consen 226 LYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLS---PLQWIGIVLVFAGI 292 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCC---hHHHHHHHHhHHHH
Confidence 34444455545545555555566666666666666677777777777777766 54444444444443
No 67
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=74.20 E-value=15 Score=28.48 Aligned_cols=104 Identities=14% Similarity=0.061 Sum_probs=67.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhh-hHH
Q psy14361 24 YPLSIVVCHLVFKFLVALICRKVYELYTHQKRVLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKST-SVV 102 (223)
Q Consensus 24 ~P~~lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~-~pi 102 (223)
-|+.=+.+-+..+.+.+.++....+....+..++.||.. .-=|++-+..+.+.+.+...+.++....+--+ ..+
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-----~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~ 103 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-----YLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLI 103 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-----hccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 377888888999988888877654432111122334422 22566777778888888888888877776654 344
Q ss_pred HHHHHHHH----hhccccchhhhhhhheecceeeeee
Q psy14361 103 FILIFSLV----FQLEKKSRKRLRLYGESNPGTSGLV 135 (223)
Q Consensus 103 ~v~l~~~~----~~~e~~s~~~~~~~~~l~~i~~Gv~ 135 (223)
..+++..+ .-+++++ +.+.+.+.++++|+.
T Consensus 104 ~sl~iD~fG~fg~~~~~~~---~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 104 ASLLIDHFGLFGAPKRPFS---LRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHccccCCCCCCCC---HHHHHHHHHHHHHHh
Confidence 44455553 3355566 778888888888764
No 68
>KOG2922|consensus
Probab=73.16 E-value=5.1 Score=35.78 Aligned_cols=66 Identities=18% Similarity=-0.016 Sum_probs=57.4
Q ss_pred HHHh-hhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeee
Q psy14361 69 PTGI-ASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMF 137 (223)
Q Consensus 69 plsi-~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~ 137 (223)
..|+ .+.+.-..+..||.|-|.+...-+-+...++.++++..+++||.+ +.-.+.+.+.++|-.+.
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~---~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLN---LLGILGCVLCVVGSTTI 134 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHH---HhhhhheeEEecccEEE
Confidence 3565 466777788899999999999999999999999999999999999 88888888888887543
No 69
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=71.27 E-value=7.1 Score=33.92 Aligned_cols=52 Identities=13% Similarity=0.096 Sum_probs=44.4
Q ss_pred hhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeee
Q psy14361 80 FSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGL 134 (223)
Q Consensus 80 l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv 134 (223)
+.-+++...|-+.+.++-+..|.+-.+.++++++|+++ +..++++..++.+.
T Consensus 226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls---~~qwlaI~~ViaAs 277 (292)
T COG5006 226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLT---LIQWLAIAAVIAAS 277 (292)
T ss_pred HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHH
Confidence 77789999999999999999999999999999999999 66666665555444
No 70
>PRK13499 rhamnose-proton symporter; Provisional
Probab=68.91 E-value=90 Score=28.24 Aligned_cols=96 Identities=11% Similarity=-0.004 Sum_probs=69.3
Q ss_pred HHHHhhhhhhhHhhhhhhhhhhHHHHHHHh-hhhHHHHHHHHHHhhcccc---c-hhhhhhhheecceeeeeeeeee---
Q psy14361 68 APTGIASGLDVGFSQWGLRSIAVSLYTMTK-STSVVFILIFSLVFQLEKK---S-RKRLRLYGESNPGTSGLVMFTY--- 139 (223)
Q Consensus 68 lplsi~~~~~i~l~N~sl~~vsvs~~qm~K-s~~pi~v~l~~~~~~~e~~---s-~~~~~~~~~l~~i~~Gv~l~~~--- 139 (223)
+..|++.+....+.-.+.+|+-+|...-+- ....++..++..++.+|-. + +......++++++++|+.+.++
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 336667777777888899999998877655 3566777788888877633 2 1112267889999999999887
Q ss_pred -cCcc--------c-cHHHHHHHHHHHHHHHHHH
Q psy14361 140 -KATA--------F-NWLGFSLVLLASFSSGLRW 163 (223)
Q Consensus 140 -~e~~--------~-~~~G~~l~l~s~~~~al~~ 163 (223)
.|.+ + ...|++++++|.+..+.+.
T Consensus 157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred hcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 4431 2 3679999999998888766
No 71
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=63.22 E-value=6.5 Score=34.60 Aligned_cols=66 Identities=6% Similarity=-0.003 Sum_probs=52.3
Q ss_pred HHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeee
Q psy14361 66 KIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGL 134 (223)
Q Consensus 66 ~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv 134 (223)
.++-.|+..+.-..+-..+-+.+|.|..-++....|....++++++++|.++ ..++.+-..|-.|+
T Consensus 213 LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~---~~~~~~F~~IW~aL 278 (293)
T COG2962 213 LLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFD---SDQLVTFAFIWLAL 278 (293)
T ss_pred HHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCC---HHHHHHHHHHHHHH
Confidence 3445677788888888889999999999999999999999999999999998 55544444443333
No 72
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=61.24 E-value=24 Score=29.60 Aligned_cols=48 Identities=6% Similarity=0.104 Sum_probs=41.2
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHHHHHHh
Q psy14361 64 LHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILIFSLVF 111 (223)
Q Consensus 64 ~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~ 111 (223)
+..++-.+++..+...+-|.++++.|.+...+.-...|++.++++.+.
T Consensus 208 ~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 208 WLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 345556777777888899999999999999999999999999998764
No 73
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=39.41 E-value=98 Score=26.24 Aligned_cols=51 Identities=12% Similarity=-0.020 Sum_probs=38.2
Q ss_pred cccchHHHHHHHHHHHhhhhhhhHhhhhhhhhhhHHHHHHHhhhhHHHHHH
Q psy14361 56 VLLCWHNQLHKIAPTGIASGLDVGFSQWGLRSIAVSLYTMTKSTSVVFILI 106 (223)
Q Consensus 56 ~~~~~~~~~~~~lplsi~~~~~i~l~N~sl~~vsvs~~qm~Ks~~pi~v~l 106 (223)
.+.+++..+.-.+||=+|.+.-....-......++|..+..+....+|...
T Consensus 94 ~~~s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~ 144 (224)
T PF09930_consen 94 KDSSRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFIL 144 (224)
T ss_pred CCCcccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 344555567788999888777777667777888999999988887777554
No 74
>KOG2765|consensus
Probab=31.09 E-value=26 Score=32.16 Aligned_cols=60 Identities=12% Similarity=0.048 Sum_probs=43.5
Q ss_pred hhhhhhhhhHHHHHHHhhhhHHHHHHHHHHhhccccchhhhhhhheecceeeeeeeeeecCcc
Q psy14361 81 SQWGLRSIAVSLYTMTKSTSVVFILIFSLVFQLEKKSRKRLRLYGESNPGTSGLVMFTYKATA 143 (223)
Q Consensus 81 ~N~sl~~vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s~~~~~~~~~l~~i~~Gv~l~~~~e~~ 143 (223)
--.+....+.-..+..-+.+.+..++.-.++.+++++ +..++...+|.+|.+++.+....
T Consensus 335 W~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S---~~~iiGsi~Ifv~Fv~vn~~~~~ 394 (416)
T KOG2765|consen 335 WAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPS---ALYIIGSIPIFVGFVIVNISSEN 394 (416)
T ss_pred HHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCC---HHHHHHHHHHHHHHhheeccccc
Confidence 3344444555555556667777778888999999999 88888888988888877765543
No 75
>COG3274 Predicted O-acyltransferase [General function prediction only]
Probab=23.91 E-value=2.4e+02 Score=25.41 Aligned_cols=30 Identities=23% Similarity=0.347 Sum_probs=25.4
Q ss_pred hhHHHHHHHhhhhHHHHHHHHHHhhccccc
Q psy14361 88 IAVSLYTMTKSTSVVFILIFSLVFQLEKKS 117 (223)
Q Consensus 88 vsvs~~qm~Ks~~pi~v~l~~~~~~~e~~s 117 (223)
+.--+++..|.+.|+|.++-++++.+|+..
T Consensus 42 i~nvlns~sr~aVPLFfmISGyL~~~e~s~ 71 (332)
T COG3274 42 IANVLNSASRVAVPLFFMISGYLFFGERSA 71 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 445568899999999999999999999653
No 76
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=23.28 E-value=30 Score=30.08 Aligned_cols=18 Identities=0% Similarity=0.010 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy14361 27 SIVVCHLVFKFLVALICR 44 (223)
Q Consensus 27 ~lt~~~~~~~~~~~~~~~ 44 (223)
.-..+-+.++++.+.+..
T Consensus 179 ~saiLPqAiGMv~~ali~ 196 (288)
T COG4975 179 LSAILPQAIGMVIGALIL 196 (288)
T ss_pred hhhhhHHHHHHHHHHHHH
Confidence 334456667777766654
Done!