BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy14373
         (65 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9VJ79|PDE11_DROME Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 OS=Drosophila
           melanogaster GN=Pde11 PE=1 SV=4
          Length = 1451

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 27/36 (75%)

Query: 14  QCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKV 49
           +  R++ LRVPSA    LHDFKFDDIH EDDDTLK 
Sbjct: 787 EAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKA 822



 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)

Query: 1   MVFRILTHTQSLIQCQRVQSLRVPSAAKLN---LHDFKFDDIHMED 43
           MVFRILTH QSLIQCQRVQ L V  A K +   + DF+ +D+  E+
Sbjct: 608 MVFRILTHMQSLIQCQRVQILLVHEADKGSFSRVFDFEANDLSEEE 653


>sp|P19462|VGLG_RABVH Glycoprotein G OS=Rabies virus (strain HEP-Flury) GN=G PE=1 SV=1
          Length = 524

 Score = 29.6 bits (65), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 24  PSAAKLNLHDFKFDDI-HMEDDDTLKVRSNC--GLCRSMPMSSVS 65
           P    +NLHDF+ D+I H+ +++ +K R  C   L   M   SVS
Sbjct: 272 PPGQLVNLHDFRSDEIEHLVEEELVKKREECLDALESIMTTKSVS 316


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.326    0.134    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,605,435
Number of Sequences: 539616
Number of extensions: 557094
Number of successful extensions: 1535
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1530
Number of HSP's gapped (non-prelim): 7
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)