BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14374
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54813|YME1_CAEEL ATP-dependent zinc metalloprotease YME1 homolog OS=Caenorhabditis
elegans GN=ymel-1 PE=3 SV=2
Length = 723
Score = 131 bits (329), Expect = 3e-30, Method: Composition-based stats.
Identities = 61/104 (58%), Positives = 79/104 (75%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GH +V+ +TKD+ PLHKVT IIPRG SLGHTA +PEK+ Y +TK+Q++
Sbjct: 506 TAYHEAGHTLVSLYTKDATPLHKVT-------IIPRGQSLGHTAMLPEKDSYQLTKAQML 558
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
A +D MMGGR AEEL+FG +KVT+GA+ DL +AT +A MV+ F
Sbjct: 559 ATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVF 602
Score = 100 bits (250), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 59/72 (81%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG SLGHTA +PEK+ Y +TK+Q++A +D MMGGR AEEL+FG +KVT+GA+ DL
Sbjct: 529 VTIIPRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDL 588
Query: 168 VQATSIATHMVR 179
+AT +A MV+
Sbjct: 589 SKATQLAVQMVK 600
>sp|Q96TA2|YMEL1_HUMAN ATP-dependent zinc metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1
PE=1 SV=2
Length = 773
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
ITAYHE GHA++A++TKD+ P++K T I+PRG +LGH + +PE +R++ T++QL
Sbjct: 595 ITAYHESGHAIIAYYTKDAMPINKAT-------IMPRGPTLGHVSLLPENDRWNETRAQL 647
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+A MD MGGR AEEL+FG + +T+GASSD AT IA MV +F
Sbjct: 648 LAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 692
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 53/70 (75%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG +LGH + +PE +R++ T++QL+A MD MGGR AEEL+FG + +T+GASSD
Sbjct: 620 TIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 679
Query: 169 QATSIATHMV 178
AT IA MV
Sbjct: 680 NATKIAKRMV 689
>sp|O88967|YMEL1_MOUSE ATP-dependent zinc metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1
PE=2 SV=1
Length = 715
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
ITAYHE GHA++A++TKD+ P++K T I+PRG +LGH + +PE +R++ T++QL
Sbjct: 537 ITAYHESGHAIIAYYTKDAMPINKAT-------IMPRGPTLGHVSLLPENDRWNETRAQL 589
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+A MD MGGR AEEL+FG + +T+GASSD AT IA MV +F
Sbjct: 590 LAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 53/70 (75%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG +LGH + +PE +R++ T++QL+A MD MGGR AEEL+FG + +T+GASSD
Sbjct: 562 TIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 621
Query: 169 QATSIATHMV 178
AT IA MV
Sbjct: 622 NATKIAKRMV 631
>sp|Q925S8|YMEL1_RAT ATP-dependent zinc metalloprotease YME1L1 OS=Rattus norvegicus
GN=Yme1l1 PE=2 SV=1
Length = 715
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 76/105 (72%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
ITAYHE GHA++A++TKD+ P++K T I+PRG +LGH + +PE +R++ ++QL
Sbjct: 537 ITAYHESGHAIIAYYTKDAMPINKAT-------IMPRGPTLGHVSLLPENDRWNEIRAQL 589
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+A MD MGGR AEEL+FG + +T+GASSD AT IA MV +F
Sbjct: 590 LAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG +LGH + +PE +R++ ++QL+A MD MGGR AEEL+FG + +T+GASSD
Sbjct: 562 TIMPRGPTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFD 621
Query: 169 QATSIATHMV 178
AT IA MV
Sbjct: 622 NATKIAKRMV 631
>sp|Q8LQJ8|FTSH5_ORYSJ ATP-dependent zinc metalloprotease FTSH 5, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH5 PE=3 SV=1
Length = 715
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 76/105 (72%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+VA T+ +HP+HK TI+PRG++LG A +P+K+ V++ Q+
Sbjct: 485 LTAYHEGGHALVAIHTEGAHPVHKA-------TIVPRGMALGMVAQLPDKDETSVSRKQM 537
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+A +D MGGR AEEL+FG +VTSGASSD QAT++A MV ++
Sbjct: 538 LARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAMVTKY 582
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 53/70 (75%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG++LG A +P+K+ V++ Q++A +D MGGR AEEL+FG +VTSGASSD
Sbjct: 510 TIVPRGMALGMVAQLPDKDETSVSRKQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQ 569
Query: 169 QATSIATHMV 178
QAT++A MV
Sbjct: 570 QATAVARAMV 579
>sp|Q9FGM0|FTSHB_ARATH ATP-dependent zinc metalloprotease FTSH 11,
chloroplastic/mitochondrial OS=Arabidopsis thaliana
GN=FTSH11 PE=1 SV=1
Length = 806
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 7/102 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHE GHA+VA TK +HP+HK TI+PRG +LG +P + V+K QL
Sbjct: 616 LTAYHESGHAIVALNTKGAHPIHKA-------TIMPRGSALGMVTQLPSNDETSVSKRQL 668
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
+A +D MGGR AEEL+FG + +T+GASSDL QAT +A +MV
Sbjct: 669 LARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMV 710
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG +LG +P + V+K QL+A +D MGGR AEEL+FG + +T+GASSDL
Sbjct: 641 TIMPRGSALGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLS 700
Query: 169 QATSIATHMV 178
QAT +A +MV
Sbjct: 701 QATELAQYMV 710
>sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2
Length = 717
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 75/105 (71%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TA+HEGGHA+VA T+ + P+HK T I+PRG++LG + +P+K+ +++ Q+
Sbjct: 482 LTAFHEGGHALVAIHTEGALPVHKAT-------IVPRGMALGMVSQLPDKDETSISRKQM 534
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+A +D MGGR AEEL+FG +VTSGASSDL QAT +A MV +F
Sbjct: 535 LARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKF 579
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 53/70 (75%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG++LG + +P+K+ +++ Q++A +D MGGR AEEL+FG +VTSGASSDL
Sbjct: 507 TIVPRGMALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLE 566
Query: 169 QATSIATHMV 178
QAT +A MV
Sbjct: 567 QATKLARAMV 576
>sp|P46508|YME1_SCHMA ATP-dependent zinc metalloprotease YME1 homolog OS=Schistosoma
mansoni PE=2 SV=1
Length = 662
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 54/105 (51%), Positives = 76/105 (72%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
++A+HE GHA+VA T DS PLHKVT IIPRG + G T+++ EK+ +T++QL
Sbjct: 421 VSAFHEAGHALVALLTADSIPLHKVT-------IIPRGEAGGLTSFLQEKDISFMTRAQL 473
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+A +D +MGGR EELVFGA+KVT+GA+ D +AT +A +MV+ F
Sbjct: 474 LAQLDVLMGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRF 518
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Query: 92 LVQATSIATHMVREFVVTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEE 151
L+ A SI H V TIIPRG + G T+++ EK+ +T++QL+A +D +MGGR EE
Sbjct: 434 LLTADSIPLHKV-----TIIPRGEAGGLTSFLQEKDISFMTRAQLLAQLDVLMGGRVGEE 488
Query: 152 LVFGAEKVTSGASSDLVQATSIATHMVR 179
LVFGA+KVT+GA+ D +AT +A +MV+
Sbjct: 489 LVFGADKVTNGAADDFRKATILAQNMVK 516
>sp|O59824|YME1_SCHPO ATP-dependent zinc metalloprotease YME1 homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC965.04c PE=3 SV=1
Length = 709
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 76/106 (71%), Gaps = 7/106 (6%)
Query: 1 MITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQ 60
++TAYHEGGHA+VA FTK++ P +K TI+PRG SLG T +P+ ++ T+ +
Sbjct: 525 LMTAYHEGGHALVALFTKNA------MRP-YKATIMPRGSSLGMTISLPDMDKDSWTREE 577
Query: 61 LMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+AM+D MGGRAAEEL++G +K+TSGA +D+ +AT +A MV EF
Sbjct: 578 YLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVARRMVTEF 623
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 57/80 (71%)
Query: 101 HMVREFVVTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVT 160
+ +R + TI+PRG SLG T +P+ ++ T+ + +AM+D MGGRAAEEL++G +K+T
Sbjct: 543 NAMRPYKATIMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKIT 602
Query: 161 SGASSDLVQATSIATHMVRE 180
SGA +D+ +AT +A MV E
Sbjct: 603 SGAHNDIDKATQVARRMVTE 622
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 76/121 (62%), Gaps = 12/121 (9%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+VA + PL P+HK TI+PRG +LG +PE +RY + Q+
Sbjct: 409 LTAYHEGGHAIVAL----NVPL---ADPVHKATIVPRGRALGMVMQLPEGDRYSMKYQQM 461
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREFVVTIIPRGVSLGHTA 121
+ + MMGGR AEE++FG E +TSGASSD+ AT +A +MV + + I LG A
Sbjct: 462 TSRLAIMMGGRVAEEIIFGKENITSGASSDIKAATDLARNMVTRWGYSDI-----LGTVA 516
Query: 122 Y 122
Y
Sbjct: 517 Y 517
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG +LG +PE +RY + Q+ + + MMGGR AEE++FG E +TSGASSD+
Sbjct: 434 TIVPRGRALGMVMQLPEGDRYSMKYQQMTSRLAIMMGGRVAEEIIFGKENITSGASSDIK 493
Query: 169 QATSIATHMV 178
AT +A +MV
Sbjct: 494 AATDLARNMV 503
>sp|A2ZVG7|FTSH9_ORYSJ ATP-dependent zinc metalloprotease FTSH 9,
chloroplastic/mitochondrial OS=Oryza sativa subsp.
japonica GN=FTSH9 PE=3 SV=1
Length = 784
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%), Gaps = 7/103 (6%)
Query: 1 MITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQ 60
++TAYHE GHA+VA T+ +HP+HK TI+PRG +LG +P ++ ++K Q
Sbjct: 596 ILTAYHESGHAIVALNTQGAHPIHKA-------TILPRGSALGMVTQLPSQDETSISKKQ 648
Query: 61 LMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
L+A +D MGGR AEEL+FG + VT+GA +DL AT +A +MV
Sbjct: 649 LLARLDVCMGGRVAEELIFGEDNVTTGARNDLHTATELAQYMV 691
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG +LG +P ++ ++K QL+A +D MGGR AEEL+FG + VT+GA +DL
Sbjct: 622 TILPRGSALGMVTQLPSQDETSISKKQLLARLDVCMGGRVAEELIFGEDNVTTGARNDLH 681
Query: 169 QATSIATHMV 178
AT +A +MV
Sbjct: 682 TATELAQYMV 691
>sp|Q8LQJ9|FTSH4_ORYSJ ATP-dependent zinc metalloprotease FTSH 4, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH4 PE=3 SV=1
Length = 709
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+VA T+ + P+HK T I+PRG +LG + +PEK+ ++ Q+
Sbjct: 478 LTAYHEGGHALVAIHTEGARPVHKAT-------IVPRGRTLGMVSQLPEKDETSFSRKQM 530
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+A +D M GR AEEL+FG +VTSGASSD AT +A MV ++
Sbjct: 531 LAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVTKY 575
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG +LG + +PEK+ ++ Q++A +D M GR AEEL+FG +VTSGASSD
Sbjct: 503 TIVPRGRTLGMVSQLPEKDETSFSRKQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQ 562
Query: 169 QATSIATHMV 178
AT +A MV
Sbjct: 563 NATKMARAMV 572
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 12/121 (9%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHE GHA+VA V+ P+HK TI+PRG +LG +PE +RY ++ +
Sbjct: 414 LTAYHEAGHAIVALNVP-------VSDPVHKATIVPRGRALGMVMQLPEGDRYSMSYLWM 466
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREFVVTIIPRGVSLGHTA 121
++ + MMGGR AEEL FG E +TSGA+SD+ QAT +A M+ + + + LGH A
Sbjct: 467 VSRLAIMMGGRVAEELKFGKENITSGAASDIEQATKLARAMITRWGFSDM-----LGHVA 521
Query: 122 Y 122
Y
Sbjct: 522 Y 522
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TI+PRG +LG +PE +RY ++ +++ + MMGGR AEEL FG E +TSGA+SD+
Sbjct: 439 TIVPRGRALGMVMQLPEGDRYSMSYLWMVSRLAIMMGGRVAEELKFGKENITSGAASDIE 498
Query: 169 QATSIATHMV 178
QAT +A M+
Sbjct: 499 QATKLARAMI 508
>sp|B4SCV5|FTSH_PELPB ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ftsH
PE=3 SV=1
Length = 662
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 73/105 (69%), Gaps = 9/105 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHE GH +V+ TK S P+HKVT IIPRG SLG TAY+P ++RY + L
Sbjct: 468 LTAYHEAGHVLVSIHTKGSDPIHKVT-------IIPRGRSLGLTAYLPLEDRYTHNREYL 520
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+AM+ +GGR AEELVF ++ ++GA++D+ +AT IA MVR++
Sbjct: 521 LAMITYALGGRVAEELVF--QECSTGAANDIEKATDIARRMVRQW 563
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG SLG TAY+P ++RY + L+AM+ +GGR AEELVF ++ ++GA++D+
Sbjct: 492 VTIIPRGRSLGLTAYLPLEDRYTHNREYLLAMITYALGGRVAEELVF--QECSTGAANDI 549
Query: 168 VQATSIATHMVRE 180
+AT IA MVR+
Sbjct: 550 EKATDIARRMVRQ 562
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 74/105 (70%), Gaps = 9/105 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
ITAYHE GHA+V ++ P+HKVT IIPRG +LG T +PE++R+ ++++QL
Sbjct: 447 ITAYHEAGHAIVGALLPEADPVHKVT-------IIPRGQALGVTMSLPEEDRFMMSRAQL 499
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
MA + M+GGRAAE +VF E++T+GAS+D+ +AT +A MV +
Sbjct: 500 MAQLSYMLGGRAAERVVF--EEITTGASNDIERATKVARQMVTRY 542
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T +PE++R+ ++++QLMA + M+GGRAAE +VF E++T+GAS+D+
Sbjct: 471 VTIIPRGQALGVTMSLPEEDRFMMSRAQLMAQLSYMLGGRAAERVVF--EEITTGASNDI 528
Query: 168 VQATSIATHMV 178
+AT +A MV
Sbjct: 529 ERATKVARQMV 539
>sp|Q6LUJ8|FTSH_PHOPR ATP-dependent zinc metalloprotease FtsH OS=Photobacterium profundum
GN=ftsH PE=3 SV=1
Length = 696
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 71/104 (68%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA++ D P++KV+ IIPRG +LG T Y+PEK+R ++ L
Sbjct: 438 TAYHEAGHAIIGRLVPDHDPVYKVS-------IIPRGRALGVTMYLPEKDRISHSREFLE 490
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+M+ ++ GGR AEEL++G +KV++GAS+D+ +AT IA MV ++
Sbjct: 491 SMLSSLYGGRLAEELIYGVDKVSTGASNDIERATDIARKMVTQW 534
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 75/117 (64%), Gaps = 11/117 (9%)
Query: 73 AAEELVFGAEKVTSGASSDLVQATS-------IATHMVRE----FVVTIIPRGVSLGHTA 121
A ++++ GAE+ + S D ++T+ I +V + + V+IIPRG +LG T
Sbjct: 415 AKDKIMMGAERKSMVMSEDQKESTAYHEAGHAIIGRLVPDHDPVYKVSIIPRGRALGVTM 474
Query: 122 YIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 178
Y+PEK+R ++ L +M+ ++ GGR AEEL++G +KV++GAS+D+ +AT IA MV
Sbjct: 475 YLPEKDRISHSREFLESMLSSLYGGRLAEELIYGVDKVSTGASNDIERATDIARKMV 531
>sp|Q1RGP0|FTSH_RICBR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia bellii
(strain RML369-C) GN=ftsH PE=3 SV=1
Length = 638
Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+V + S P+HK T IIPRG +LG +PE +R+ + + ++
Sbjct: 413 LTAYHEGGHALVGLYCLASDPIHKAT-------IIPRGRALGMVMRLPENDRFSMPRDKM 465
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
A + M GR AEE++FG EKVTSGASSD+ AT +A MV ++
Sbjct: 466 EADIAVAMAGRVAEEIIFGKEKVTSGASSDIKMATRMAKAMVTDW 510
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TIIPRG +LG +PE +R+ + + ++ A + M GR AEE++FG EKVTSGASSD+
Sbjct: 438 TIIPRGRALGMVMRLPENDRFSMPRDKMEADIAVAMAGRVAEEIIFGKEKVTSGASSDIK 497
Query: 169 QATSIATHMVRE 180
AT +A MV +
Sbjct: 498 MATRMAKAMVTD 509
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 72/107 (67%), Gaps = 13/107 (12%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTH--PLHKVTIIPRGVSLGHTAYIPEKERYHVTKS 59
+TAYHE GHAVV H + H PLHK+TIIPRG ++G+T ++P ++RY+++KS
Sbjct: 416 VTAYHEAGHAVVG---------HMLPHMDPLHKITIIPRGRAMGYTLFLPVEDRYNISKS 466
Query: 60 QLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+++ M +GGRAAEE+ FG ++TSGA D+ + T A MV E+
Sbjct: 467 EILDRMTMALGGRAAEEITFG--EITSGAQDDIERTTQWARRMVTEW 511
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
+TIIPRG ++G+T ++P ++RY+++KS+++ M +GGRAAEE+ FG ++TSGA D+
Sbjct: 440 ITIIPRGRAMGYTLFLPVEDRYNISKSEILDRMTMALGGRAAEEITFG--EITSGAQDDI 497
Query: 168 VQATSIATHMVRE 180
+ T A MV E
Sbjct: 498 ERTTQWARRMVTE 510
>sp|B1GZK7|FTSH_UNCTG ATP-dependent zinc metalloprotease FtsH OS=Uncultured termite group
1 bacterium phylotype Rs-D17 GN=ftsH PE=3 SV=1
Length = 631
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 9/105 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
I AYHE GH +VA F + P+HKV+ IIPRG +LG+T +PE+++Y +KS+L
Sbjct: 414 IIAYHEAGHTLVAKFLPSADPVHKVS-------IIPRGPALGYTLQLPEEDKYLTSKSEL 466
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + + GGR AEELVF ++T+GA +D+ +AT IA MV EF
Sbjct: 467 LDKLSILFGGRVAEELVF--SEITTGAQNDISKATGIAMRMVTEF 509
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
V+IIPRG +LG+T +PE+++Y +KS+L+ + + GGR AEELVF ++T+GA +D+
Sbjct: 438 VSIIPRGPALGYTLQLPEEDKYLTSKSELLDKLSILFGGRVAEELVF--SEITTGAQNDI 495
Query: 168 VQATSIATHMVRE 180
+AT IA MV E
Sbjct: 496 SKATGIAMRMVTE 508
>sp|P71377|FTSH_HAEIN ATP-dependent zinc metalloprotease FtsH OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ftsH PE=3
SV=1
Length = 635
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 72/104 (69%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA+V + P H P+HKVTIIPRG +LG T ++PE ++ +++ QL
Sbjct: 410 TAYHEAGHAIVGYLV----PEH---DPVHKVTIIPRGRALGVTFFLPEGDQISISQKQLE 462
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + T+ GR AE+L++G E +++GAS+D+ AT+IA +MV ++
Sbjct: 463 SKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQW 506
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 53/71 (74%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T ++PE ++ +++ QL + + T+ GR AE+L++G E +++GAS+D+
Sbjct: 433 VTIIPRGRALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDI 492
Query: 168 VQATSIATHMV 178
AT+IA +MV
Sbjct: 493 KVATNIARNMV 503
>sp|P45219|FTSHL_HAEIN ATP-dependent zinc metalloprotease FtsH homolog OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1465 PE=3 SV=1
Length = 381
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 72/104 (69%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA+V + P H P+HKVTIIPRG +LG T ++PE ++ +++ QL
Sbjct: 156 TAYHEAGHAIVGYLV----PEH---DPVHKVTIIPRGRALGVTFFLPEGDQISISQKQLE 208
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + T+ GR AE+L++G E +++GAS+D+ AT+IA +MV ++
Sbjct: 209 SKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQW 252
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 53/71 (74%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T ++PE ++ +++ QL + + T+ GR AE+L++G E +++GAS+D+
Sbjct: 179 VTIIPRGRALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDI 238
Query: 168 VQATSIATHMV 178
AT+IA +MV
Sbjct: 239 KVATNIARNMV 249
>sp|A9EXK6|FTSH4_SORC5 ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH4 PE=3 SV=1
Length = 648
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 76/116 (65%), Gaps = 8/116 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA+VA L K + P+HKVTIIPRG +LG T +P+++R +++
Sbjct: 424 TAYHEAGHALVAKL------LEKFSDPVHKVTIIPRGPALGLTQQLPKEDRLSMSRDFAK 477
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREFVVTIIPRGVSLG 118
A + +MGGR AEE+VFG + T+GA +D+ QA+++A MV EF ++ + +S G
Sbjct: 478 ARLSVLMGGRVAEEIVFG--QFTTGAGNDIKQASNLARRMVTEFGMSDVIGPISYG 531
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T +P+++R +++ A + +MGGR AEE+VFG + T+GA +D+
Sbjct: 448 VTIIPRGPALGLTQQLPKEDRLSMSRDFAKARLSVLMGGRVAEEIVFG--QFTTGAGNDI 505
Query: 168 VQATSIATHMVRE 180
QA+++A MV E
Sbjct: 506 KQASNLARRMVTE 518
>sp|Q4UN68|FTSH_RICFE ATP-dependent zinc metalloprotease FtsH OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=ftsH PE=3 SV=1
Length = 635
Score = 97.1 bits (240), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+V + PLHK TIIPRG +LG +PE + Y + Q+
Sbjct: 413 LTAYHEGGHALVGLYCP-------AASPLHKATIIPRGNALGMVQRLPETDEYSQNREQM 465
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
+ + M GR AEE++FG KVTSGASSD+ AT+IA MV
Sbjct: 466 ESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMV 507
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TIIPRG +LG +PE + Y + Q+ + + M GR AEE++FG KVTSGASSD+
Sbjct: 438 TIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIK 497
Query: 169 QATSIATHMV 178
AT+IA MV
Sbjct: 498 GATNIARAMV 507
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+ AYHE GHA+V KD P+ KVT +IPRG + G T + P +E+ TK+QL
Sbjct: 429 LIAYHEVGHAIVGTLLKDHDPVQKVT-------LIPRGQAQGLTWFTPNEEQGLTTKAQL 481
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
MA + MGGRAAEE VFG ++VT+GA DL Q T +A MV F
Sbjct: 482 MARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRF 526
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VT+IPRG + G T + P +E+ TK+QLMA + MGGRAAEE VFG ++VT+GA DL
Sbjct: 453 VTLIPRGQAQGLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDL 512
Query: 168 VQATSIATHMV 178
Q T +A MV
Sbjct: 513 QQVTEMARQMV 523
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/106 (45%), Positives = 70/106 (66%), Gaps = 7/106 (6%)
Query: 1 MITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQ 60
++TAYHE GHAV + + S P+HK T IIPRG +LG +PE +R T+++
Sbjct: 414 LLTAYHEAGHAVTSLKLEASDPIHKAT-------IIPRGRALGLVMRLPEHDRVSFTRAK 466
Query: 61 LMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ A + MGGRAAE+++FG +K TSGA+SD+ QAT +A MV ++
Sbjct: 467 MHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQATHLARSMVTKW 512
Score = 73.6 bits (179), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TIIPRG +LG +PE +R T++++ A + MGGRAAE+++FG +K TSGA+SD+
Sbjct: 440 TIIPRGRALGLVMRLPEHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIK 499
Query: 169 QATSIATHMV 178
QAT +A MV
Sbjct: 500 QATHLARSMV 509
>sp|Q92JJ9|FTSH_RICCN ATP-dependent zinc metalloprotease FtsH OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=ftsH PE=3 SV=1
Length = 637
Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+V + P+HK TIIPRG +LG +PE + Y + Q+
Sbjct: 413 LTAYHEGGHALVGLYCP-------AASPIHKATIIPRGNALGMVQRLPETDEYSQNREQM 465
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
+ + M GR AEE++FG KVTSGASSD+ AT+IA MV
Sbjct: 466 ESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMV 507
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TIIPRG +LG +PE + Y + Q+ + + M GR AEE++FG KVTSGASSD+
Sbjct: 438 TIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIK 497
Query: 169 QATSIATHMV 178
AT+IA MV
Sbjct: 498 GATNIARAMV 507
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 9/102 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+ AYHE GHAVVA+FT + PL K++ I+PRG +LG T PE++R++ T++QL
Sbjct: 508 LVAYHEAGHAVVAYFTPGADPLRKIS-------IVPRGRALGVTVQAPEEDRFNYTRNQL 560
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
+ + ++GGRAAE+LVF +VT+GA +DL +AT +A MV
Sbjct: 561 LGRLAVLLGGRAAEQLVF--HEVTTGAQNDLKEATQLARRMV 600
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
++I+PRG +LG T PE++R++ T++QL+ + ++GGRAAE+LVF +VT+GA +DL
Sbjct: 532 ISIVPRGRALGVTVQAPEEDRFNYTRNQLLGRLAVLLGGRAAEQLVF--HEVTTGAQNDL 589
Query: 168 VQATSIATHMV 178
+AT +A MV
Sbjct: 590 KEATQLARRMV 600
>sp|Q9ZEA2|FTSH_RICPR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia prowazekii
(strain Madrid E) GN=ftsH PE=3 SV=1
Length = 637
Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+V + P+HK TIIPRG +LG +PE + Y + Q+
Sbjct: 413 LTAYHEGGHALVGLYCP-------AASPIHKATIIPRGNALGMVQRLPETDEYSQNREQM 465
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
+ + M GR AEE++FG KVTSGASSD+ AT+IA MV
Sbjct: 466 ESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMV 507
Score = 71.2 bits (173), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TIIPRG +LG +PE + Y + Q+ + + M GR AEE++FG KVTSGASSD+
Sbjct: 438 TIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIK 497
Query: 169 QATSIATHMV 178
AT+IA MV
Sbjct: 498 GATNIARAMV 507
>sp|C5J6A7|FTSH_MYCCR ATP-dependent zinc metalloprotease FtsH OS=Mycoplasma conjunctivae
(strain ATCC 25834 / HRC/581 / NCTC 10147) GN=ftsH PE=3
SV=1
Length = 754
Score = 95.5 bits (236), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/105 (42%), Positives = 69/105 (65%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+ AYHE GHAVV + + K+T I+PRG + G+ +PE E+Y+ TKS+L
Sbjct: 495 MVAYHEAGHAVVGIKLRSGVKVQKIT-------IVPRGNTGGYNLMLPEHEKYNSTKSEL 547
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+A + MGGRAAEE+++G ++++GA++D+ +AT IA MV EF
Sbjct: 548 LASIAAFMGGRAAEEIIYGKNEISTGAANDIEKATKIARRMVTEF 592
Score = 80.5 bits (197), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
Query: 56 VTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHM---VREFVVTIIP 112
+T Q+ +D ++ G A + V ++ T A + A + + V+ +TI+P
Sbjct: 465 ITGKQIDEAIDRVISGPAKKNRVITEDERTMVAYHEAGHAV-VGIKLRSGVKVQKITIVP 523
Query: 113 RGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATS 172
RG + G+ +PE E+Y+ TKS+L+A + MGGRAAEE+++G ++++GA++D+ +AT
Sbjct: 524 RGNTGGYNLMLPEHEKYNSTKSELLASIAAFMGGRAAEEIIYGKNEISTGAANDIEKATK 583
Query: 173 IATHMVRE 180
IA MV E
Sbjct: 584 IARRMVTE 591
>sp|D4HA34|FTSH_PROAS ATP-dependent zinc metalloprotease FtsH OS=Propionibacterium acnes
(strain SK137) GN=ftsH PE=3 SV=1
Length = 717
Score = 95.5 bits (236), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/118 (42%), Positives = 77/118 (65%), Gaps = 9/118 (7%)
Query: 1 MITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQ 60
++TAYHEGGHA+VA T P+ K+TI+PRG +LG+T +P+ ++Y T+S+
Sbjct: 424 LVTAYHEGGHALVAAAMPG-------TDPVQKITILPRGRALGYTMVMPDSDKYSQTRSE 476
Query: 61 LMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREFVVTIIPRGVSLG 118
L+ M MMGGRAAEEL+F ++GAS+D+ +AT +A +V ++ ++ V LG
Sbjct: 477 LLDSMAYMMGGRAAEELIF--HDPSTGASNDIEKATKVARALVTQYGLSARVGTVQLG 532
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 92 LVQATSIATHMVREFVVTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEE 151
LV A T V++ +TI+PRG +LG+T +P+ ++Y T+S+L+ M MMGGRAAEE
Sbjct: 435 LVAAAMPGTDPVQK--ITILPRGRALGYTMVMPDSDKYSQTRSELLDSMAYMMGGRAAEE 492
Query: 152 LVFGAEKVTSGASSDLVQATSIATHMVRE 180
L+F ++GAS+D+ +AT +A +V +
Sbjct: 493 LIF--HDPSTGASNDIEKATKVARALVTQ 519
>sp|Q6KHA4|FTSH_MYCMO ATP-dependent zinc metalloprotease FtsH OS=Mycoplasma mobile
(strain ATCC 43663 / 163K / NCTC 11711) GN=ftsH PE=3
SV=1
Length = 707
Score = 95.5 bits (236), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/103 (47%), Positives = 72/103 (69%), Gaps = 7/103 (6%)
Query: 4 AYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLMA 63
AYHE GHAVV L K + K+TIIPRG + G+ IPE+E+Y+ +KS+L+A
Sbjct: 466 AYHEAGHAVVG------TQLRKGVK-VQKITIIPRGSAGGYNLMIPEEEKYNSSKSELIA 518
Query: 64 MMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
M+ + MGGRAAE++++G ++V++GA D+ +ATSIA MV E+
Sbjct: 519 MITSFMGGRAAEQIIYGEKEVSTGARDDIKKATSIARKMVTEW 561
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 56 VTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHM---VREFVVTIIP 112
+T Q +D +M G A + V E++T+ A + A + T + V+ +TIIP
Sbjct: 434 ITLEQFDEAIDRVMSGPAKKSRVITKEELTAVAYHEAGHAV-VGTQLRKGVKVQKITIIP 492
Query: 113 RGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATS 172
RG + G+ IPE+E+Y+ +KS+L+AM+ + MGGRAAE++++G ++V++GA D+ +ATS
Sbjct: 493 RGSAGGYNLMIPEEEKYNSSKSELIAMITSFMGGRAAEQIIYGEKEVSTGARDDIKKATS 552
Query: 173 IATHMVRE 180
IA MV E
Sbjct: 553 IARKMVTE 560
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 9/102 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+ AYHE GHAV A F+ T PL KV+I+PRG SLG T PE++R++ +++ L
Sbjct: 460 VVAYHEAGHAVAAHFSPG-------TDPLRKVSIVPRGQSLGVTIQAPEEDRFNYSRAYL 512
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
+A + MMGGRAAE+LVF ++T+GA +DL +AT +A MV
Sbjct: 513 LARLTVMMGGRAAEKLVF--NEMTTGAQNDLKEATLLARRMV 552
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
V+I+PRG SLG T PE++R++ +++ L+A + MMGGRAAE+LVF ++T+GA +DL
Sbjct: 484 VSIVPRGQSLGVTIQAPEEDRFNYSRAYLLARLTVMMGGRAAEKLVF--NEMTTGAQNDL 541
Query: 168 VQATSIATHMV 178
+AT +A MV
Sbjct: 542 KEATLLARRMV 552
>sp|Q83FV7|FTSH_TROWT ATP-dependent zinc metalloprotease FtsH OS=Tropheryma whipplei
(strain Twist) GN=ftsH PE=3 SV=1
Length = 666
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 71/106 (66%), Gaps = 9/106 (8%)
Query: 1 MITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQ 60
++TAYHE GHA+ A + + P+ KVTI+PR +LG+T +P ++RY VT+++
Sbjct: 419 LVTAYHEAGHALTA-------AAMRYSDPVTKVTILPRSRALGYTMVMPVQDRYSVTRNE 471
Query: 61 LMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
L+ + MGGRAAEELVF T+GAS+D+ +ATSIA MV EF
Sbjct: 472 LLDKLAYAMGGRAAEELVF--HDPTTGASNDIEKATSIARKMVTEF 515
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTI+PR +LG+T +P ++RY VT+++L+ + MGGRAAEELVF T+GAS+D+
Sbjct: 444 VTILPRSRALGYTMVMPVQDRYSVTRNELLDKLAYAMGGRAAEELVF--HDPTTGASNDI 501
Query: 168 VQATSIATHMVRE 180
+ATSIA MV E
Sbjct: 502 EKATSIARKMVTE 514
>sp|Q68XR9|FTSH_RICTY ATP-dependent zinc metalloprotease FtsH OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=ftsH PE=3 SV=1
Length = 637
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+V + P+HK TIIPRG +LG +PE + Y + Q+
Sbjct: 413 LTAYHEGGHALVGLYCP-------AASPIHKATIIPRGNALGMVQRLPETDEYSQNREQM 465
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
+ + M GR AEE++FG KVTSGA+SD+ AT+IA MV
Sbjct: 466 ESSIAVYMAGRVAEEIIFGKNKVTSGAASDIKGATNIARAMV 507
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 109 TIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLV 168
TIIPRG +LG +PE + Y + Q+ + + M GR AEE++FG KVTSGA+SD+
Sbjct: 438 TIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGKNKVTSGAASDIK 497
Query: 169 QATSIATHMV 178
AT+IA MV
Sbjct: 498 GATNIARAMV 507
>sp|B9MPK5|FTSH_CALBD ATP-dependent zinc metalloprotease FtsH OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=ftsH PE=3 SV=1
Length = 616
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 73/105 (69%), Gaps = 9/105 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHE GHA+V DS P+H+V+ IIPRG + G+T Y+P++++++ +KS +
Sbjct: 426 LTAYHEAGHAIVRTMIPDSEPVHEVS-------IIPRGYAGGYTMYLPKEDKFYASKSDM 478
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
M + T++GGR AE+LV E V++GA+SD+ +AT IA MV ++
Sbjct: 479 MREIVTLLGGRVAEKLVL--EDVSTGAASDIKRATKIARDMVTKY 521
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
V+IIPRG + G+T Y+P++++++ +KS +M + T++GGR AE+LV E V++GA+SD+
Sbjct: 450 VSIIPRGYAGGYTMYLPKEDKFYASKSDMMREIVTLLGGRVAEKLVL--EDVSTGAASDI 507
Query: 168 VQATSIATHMV 178
+AT IA MV
Sbjct: 508 KRATKIARDMV 518
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 93.6 bits (231), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/103 (45%), Positives = 74/103 (71%), Gaps = 10/103 (9%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGV-SLGHTAYIPEKERYHVTKSQ 60
I AYHE GHAVV+ + P+H+++ IIPRG +LG+T ++PE+++Y V++++
Sbjct: 419 IIAYHEAGHAVVSTVVPNGEPVHRIS-------IIPRGYKALGYTLHLPEEDKYLVSRNE 471
Query: 61 LMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
L+ + ++GGRAAEE+VFG VTSGA++D+ +AT IA +MV
Sbjct: 472 LLDKLTALLGGRAAEEVVFG--DVTSGAANDIERATEIARNMV 512
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 58/72 (80%), Gaps = 3/72 (4%)
Query: 108 VTIIPRGV-SLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSD 166
++IIPRG +LG+T ++PE+++Y V++++L+ + ++GGRAAEE+VFG VTSGA++D
Sbjct: 443 ISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFG--DVTSGAAND 500
Query: 167 LVQATSIATHMV 178
+ +AT IA +MV
Sbjct: 501 IERATEIARNMV 512
>sp|A8F7F7|FTSH_THELT ATP-dependent zinc metalloprotease FtsH OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=ftsH PE=3
SV=1
Length = 626
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 74/106 (69%), Gaps = 10/106 (9%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGV-SLGHTAYIPEKERYHVTKSQ 60
I AYHE GHA+V+ ++ P+H+++ IIPRG +LG+T +P ++RY VTK +
Sbjct: 420 IVAYHEVGHAIVSSLLPNADPVHRIS-------IIPRGYRALGYTLQLPAEDRYLVTKQE 472
Query: 61 LMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
L+ + ++GGRAAEEL+F ++VT+GA+SD+ +AT +A MV +F
Sbjct: 473 LLDQITGLLGGRAAEELIF--QEVTTGAASDIERATELARRMVCQF 516
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 108 VTIIPRGV-SLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSD 166
++IIPRG +LG+T +P ++RY VTK +L+ + ++GGRAAEEL+F ++VT+GA+SD
Sbjct: 444 ISIIPRGYRALGYTLQLPAEDRYLVTKQELLDQITGLLGGRAAEELIF--QEVTTGAASD 501
Query: 167 LVQATSIATHMV 178
+ +AT +A MV
Sbjct: 502 IERATELARRMV 513
>sp|Q3JEE4|FTSH_NITOC ATP-dependent zinc metalloprotease FtsH OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=ftsH PE=3 SV=1
Length = 639
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 9/105 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+ AYHE GHA+ A+ ++ PLH+V+ IIPRG++LG T PE+ER+ ++++ L
Sbjct: 438 LVAYHESGHALTAWLLPEADPLHQVS-------IIPRGMALGVTEQAPEEERHSLSRAYL 490
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + M+GGR +E++ FG VTSGA SDL QAT +A MV ++
Sbjct: 491 LDRLGVMLGGRISEKITFG--DVTSGAESDLKQATQLARRMVCQW 533
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
V+IIPRG++LG T PE+ER+ ++++ L+ + M+GGR +E++ FG VTSGA SDL
Sbjct: 462 VSIIPRGMALGVTEQAPEEERHSLSRAYLLDRLGVMLGGRISEKITFG--DVTSGAESDL 519
Query: 168 VQATSIATHMV 178
QAT +A MV
Sbjct: 520 KQATQLARRMV 530
>sp|A1AT11|FTSH_PELPD ATP-dependent zinc metalloprotease FtsH OS=Pelobacter propionicus
(strain DSM 2379) GN=ftsH PE=3 SV=1
Length = 623
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 65/105 (61%), Gaps = 9/105 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
ITAYHE GH +VA L T P+HKVTIIP G++LG T +PE +RYH +S L
Sbjct: 431 ITAYHEAGHTLVA-------RLLPGTDPIHKVTIIPHGMALGVTQQLPEDDRYHYPQSYL 483
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ MGGR AE L FG +V+SGA DL Q TS+A MV ++
Sbjct: 484 ENRLVVAMGGRVAERLAFG--EVSSGAQGDLKQVTSLAEKMVCQW 526
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIP G++LG T +PE +RYH +S L + MGGR AE L FG +V+SGA DL
Sbjct: 455 VTIIPHGMALGVTQQLPEDDRYHYPQSYLENRLVVAMGGRVAERLAFG--EVSSGAQGDL 512
Query: 168 VQATSIATHMV 178
Q TS+A MV
Sbjct: 513 KQVTSLAEKMV 523
>sp|Q4A5F0|FTSH_MYCS5 ATP-dependent zinc metalloprotease FtsH OS=Mycoplasma synoviae
(strain 53) GN=ftsH PE=3 SV=2
Length = 664
Score = 92.8 bits (229), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 7/105 (6%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+ AYHE GHAVV + + K+T IIPRG + G+ +PE E+Y+ +K+ L
Sbjct: 447 MVAYHEAGHAVVGIKVPGGNKVQKIT-------IIPRGNAGGYNLMMPENEKYNYSKADL 499
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
A + + MGGRAAEE+++G K+++GA+ D+ +ATSIA MV +F
Sbjct: 500 YATIASFMGGRAAEEIIYGDNKISTGAADDIKKATSIARRMVTQF 544
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 54/73 (73%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
+TIIPRG + G+ +PE E+Y+ +K+ L A + + MGGRAAEE+++G K+++GA+ D+
Sbjct: 471 ITIIPRGNAGGYNLMMPENEKYNYSKADLYATIASFMGGRAAEEIIYGDNKISTGAADDI 530
Query: 168 VQATSIATHMVRE 180
+ATSIA MV +
Sbjct: 531 KKATSIARRMVTQ 543
>sp|P63343|FTSH_SALTY ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ftsH PE=3 SV=1
Length = 644
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA++ P H P+HKVTIIPRG +LG T ++PE + ++ +L
Sbjct: 411 TAYHEAGHAIIGRLV----PEH---DPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLE 463
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + T+ GGR AEE+++G E V++GAS+D+ AT++A +MV ++
Sbjct: 464 SQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQW 507
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 52/71 (73%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T ++PE + ++ +L + + T+ GGR AEE+++G E V++GAS+D+
Sbjct: 434 VTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDI 493
Query: 168 VQATSIATHMV 178
AT++A +MV
Sbjct: 494 KVATNLARNMV 504
>sp|P63344|FTSH_SALTI ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhi GN=ftsH
PE=3 SV=1
Length = 644
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA++ P H P+HKVTIIPRG +LG T ++PE + ++ +L
Sbjct: 411 TAYHEAGHAIIGRLV----PEH---DPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLE 463
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + T+ GGR AEE+++G E V++GAS+D+ AT++A +MV ++
Sbjct: 464 SQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQW 507
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 52/71 (73%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T ++PE + ++ +L + + T+ GGR AEE+++G E V++GAS+D+
Sbjct: 434 VTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDI 493
Query: 168 VQATSIATHMV 178
AT++A +MV
Sbjct: 494 KVATNLARNMV 504
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 72/103 (69%), Gaps = 10/103 (9%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGV-SLGHTAYIPEKERYHVTKSQ 60
I AYHE GHA+VA L T P+HK+TI+PR + +LG+T +PE+E+Y V+K +
Sbjct: 423 IVAYHEVGHALVA-------ALLNNTDPVHKITIVPRTMGALGYTMQLPEEEKYLVSKEE 475
Query: 61 LMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMV 103
++ + M+GGRAAEE+VF + +T+GAS+D+ +AT A +M+
Sbjct: 476 MIDQISVMLGGRAAEEVVFNS--ITTGASNDIERATQSARNMI 516
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 108 VTIIPRGV-SLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSD 166
+TI+PR + +LG+T +PE+E+Y V+K +++ + M+GGRAAEE+VF + +T+GAS+D
Sbjct: 447 ITIVPRTMGALGYTMQLPEEEKYLVSKEEMIDQISVMLGGRAAEEVVFNS--ITTGASND 504
Query: 167 LVQATSIATHMV 178
+ +AT A +M+
Sbjct: 505 IERATQSARNMI 516
>sp|Q8X9L0|FTSH_ECO57 ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7
GN=ftsH PE=3 SV=1
Length = 644
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA++ P H P+HKVTIIPRG +LG T ++PE + ++ +L
Sbjct: 411 TAYHEAGHAIIGRLV----PEH---DPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLE 463
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + T+ GGR AEE+++G E V++GAS+D+ AT++A +MV ++
Sbjct: 464 SQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQW 507
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 52/71 (73%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T ++PE + ++ +L + + T+ GGR AEE+++G E V++GAS+D+
Sbjct: 434 VTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDI 493
Query: 168 VQATSIATHMV 178
AT++A +MV
Sbjct: 494 KVATNLARNMV 504
>sp|P0AAI4|FTSH_SHIFL ATP-dependent zinc metalloprotease FtsH OS=Shigella flexneri
GN=ftsH PE=3 SV=1
Length = 644
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA++ P H P+HKVTIIPRG +LG T ++PE + ++ +L
Sbjct: 411 TAYHEAGHAIIGRLV----PEH---DPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLE 463
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + T+ GGR AEE+++G E V++GAS+D+ AT++A +MV ++
Sbjct: 464 SQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQW 507
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 52/71 (73%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T ++PE + ++ +L + + T+ GGR AEE+++G E V++GAS+D+
Sbjct: 434 VTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDI 493
Query: 168 VQATSIATHMV 178
AT++A +MV
Sbjct: 494 KVATNLARNMV 504
>sp|P0AAI3|FTSH_ECOLI ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli (strain
K12) GN=ftsH PE=1 SV=1
Length = 644
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GHA++ P H P+HKVTIIPRG +LG T ++PE + ++ +L
Sbjct: 411 TAYHEAGHAIIGRLV----PEH---DPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLE 463
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + T+ GGR AEE+++G E V++GAS+D+ AT++A +MV ++
Sbjct: 464 SQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQW 507
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 52/71 (73%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T ++PE + ++ +L + + T+ GGR AEE+++G E V++GAS+D+
Sbjct: 434 VTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDI 493
Query: 168 VQATSIATHMV 178
AT++A +MV
Sbjct: 494 KVATNLARNMV 504
>sp|D2NQQ7|FTSH_ROTMD ATP-dependent zinc metalloprotease FtsH OS=Rothia mucilaginosa
(strain DY-18) GN=ftsH PE=3 SV=1
Length = 756
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 76/117 (64%), Gaps = 9/117 (7%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
+TAYHEGGHA+VA ++S P+ K+T I+PRG +LG+T +P+ ++Y T+ +L
Sbjct: 459 VTAYHEGGHALVAAALRNSAPVTKIT-------ILPRGRALGYTMVMPQDDKYSTTRHEL 511
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREFVVTIIPRGVSLG 118
+ M MGGRAAEE+VF ++GAS+D+ +AT A MV ++ ++ + V LG
Sbjct: 512 LDQMAYAMGGRAAEEIVF--HDPSTGASNDIQKATDTARKMVTDYGMSAVIGSVKLG 566
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
+TI+PRG +LG+T +P+ ++Y T+ +L+ M MGGRAAEE+VF ++GAS+D+
Sbjct: 483 ITILPRGRALGYTMVMPQDDKYSTTRHELLDQMAYAMGGRAAEEIVF--HDPSTGASNDI 540
Query: 168 VQATSIATHMV 178
+AT A MV
Sbjct: 541 QKATDTARKMV 551
>sp|Q98PE4|FTSH_MYCPU ATP-dependent zinc metalloprotease FtsH OS=Mycoplasma pulmonis
(strain UAB CTIP) GN=ftsH PE=3 SV=1
Length = 725
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 7/103 (6%)
Query: 4 AYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLMA 63
AYHE GHAVV K + + K+T IIPRG + G+ PE+E+Y+ +K +L+A
Sbjct: 472 AYHEAGHAVVGLKVKGGNKVQKIT-------IIPRGNAGGYNLMTPEEEKYNASKKELLA 524
Query: 64 MMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + MGGRAAE +++G E +++GAS D+ +AT IA MV E+
Sbjct: 525 TIASYMGGRAAEMIIYGKENISTGASDDISRATKIARKMVTEW 567
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Query: 56 VTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSD----LVQATSIATHMVREFVVTII 111
+ +Q+ +D +M G A + V E++ + A + +V + V++ +TII
Sbjct: 440 IISTQIDEAIDRVMAGPAKKSRVISQEELKAVAYHEAGHAVVGLKVKGGNKVQK--ITII 497
Query: 112 PRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQAT 171
PRG + G+ PE+E+Y+ +K +L+A + + MGGRAAE +++G E +++GAS D+ +AT
Sbjct: 498 PRGNAGGYNLMTPEEEKYNASKKELLATIASYMGGRAAEMIIYGKENISTGASDDISRAT 557
Query: 172 SIATHMVRE 180
IA MV E
Sbjct: 558 KIARKMVTE 566
>sp|P57462|FTSH_BUCAI ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsH PE=3
SV=2
Length = 611
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 3 TAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQLM 62
TAYHE GH ++ D P HKVT IIPRG +LG T ++PE + +++ +L
Sbjct: 411 TAYHEAGHVIIGRLVPDHDPAHKVT-------IIPRGRALGVTFFLPESDTLSISRQKLE 463
Query: 63 AMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + T+ GGR AEE+++GA+ V++GA +D+ ATS+A +MV ++
Sbjct: 464 SQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQW 507
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 53/71 (74%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTIIPRG +LG T ++PE + +++ +L + + T+ GGR AEE+++GA+ V++GA +D+
Sbjct: 434 VTIIPRGRALGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDI 493
Query: 168 VQATSIATHMV 178
ATS+A +MV
Sbjct: 494 KIATSLAKNMV 504
>sp|B2UMY1|FTSH_AKKM8 ATP-dependent zinc metalloprotease FtsH OS=Akkermansia muciniphila
(strain ATCC BAA-835) GN=ftsH PE=3 SV=1
Length = 812
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 66/105 (62%), Gaps = 9/105 (8%)
Query: 2 ITAYHEGGHAVVAFFTKDSHPLHKVTHPLHKVTIIPRGVSLGHTAYIPEKERYHVTKSQL 61
ITA HE GHA+ T S PLH+VT I+PRG +LG T ++P ++ H +S++
Sbjct: 551 ITAVHEAGHAICLLKTPHSEPLHRVT-------IVPRGGALGMTMWLPSDDKMHQLRSEM 603
Query: 62 MAMMDTMMGGRAAEELVFGAEKVTSGASSDLVQATSIATHMVREF 106
+ + MGGR AE++VFG VTSGA+ D+ AT++A MV EF
Sbjct: 604 LDQLVVAMGGRCAEQIVFG--DVTSGATGDIKSATNLARRMVCEF 646
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 108 VTIIPRGVSLGHTAYIPEKERYHVTKSQLMAMMDTMMGGRAAEELVFGAEKVTSGASSDL 167
VTI+PRG +LG T ++P ++ H +S+++ + MGGR AE++VFG VTSGA+ D+
Sbjct: 575 VTIVPRGGALGMTMWLPSDDKMHQLRSEMLDQLVVAMGGRCAEQIVFG--DVTSGATGDI 632
Query: 168 VQATSIATHMVRE 180
AT++A MV E
Sbjct: 633 KSATNLARRMVCE 645
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.129 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,884,800
Number of Sequences: 539616
Number of extensions: 2315762
Number of successful extensions: 6050
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 5194
Number of HSP's gapped (non-prelim): 451
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)