Query psy14383
Match_columns 287
No_of_seqs 193 out of 630
Neff 6.4
Searched_HMMs 46136
Date Fri Aug 16 18:28:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14383.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14383hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3770|consensus 100.0 3.4E-55 7.3E-60 430.7 22.8 261 25-286 8-425 (577)
2 cd00842 MPP_ASMase acid sphing 100.0 9E-33 2E-37 256.0 13.8 138 144-285 1-282 (296)
3 cd07395 MPP_CSTP1 Homo sapiens 97.5 8.7E-05 1.9E-09 67.6 4.2 70 199-270 145-224 (262)
4 cd07396 MPP_Nbla03831 Homo sap 97.3 8.3E-05 1.8E-09 68.3 1.8 70 198-268 159-232 (267)
5 cd07399 MPP_YvnB Bacillus subt 97.3 0.00031 6.6E-09 62.7 4.3 77 201-280 91-177 (214)
6 cd07402 MPP_GpdQ Enterobacter 96.8 0.001 2.2E-08 59.3 3.4 68 199-269 126-199 (240)
7 TIGR03768 RPA4764 metallophosp 96.8 0.00087 1.9E-08 66.5 3.0 73 199-272 329-419 (492)
8 cd07379 MPP_239FB Homo sapiens 96.8 0.0045 9.8E-08 50.7 6.7 45 219-265 68-117 (135)
9 smart00741 SapB Saposin (B) Do 96.7 0.0034 7.3E-08 45.5 5.1 63 42-107 2-76 (76)
10 cd07378 MPP_ACP5 Homo sapiens 96.5 0.0028 6.1E-08 57.9 3.9 66 197-266 147-215 (277)
11 cd07400 MPP_YydB Bacillus subt 96.4 0.0016 3.6E-08 53.5 2.1 47 222-270 81-131 (144)
12 TIGR03767 P_acnes_RR metalloph 96.4 0.0021 4.5E-08 64.2 2.7 68 199-269 320-397 (496)
13 cd07401 MPP_TMEM62_N Homo sapi 96.1 0.0033 7.2E-08 57.5 2.5 66 198-266 146-212 (256)
14 cd00839 MPP_PAPs purple acid p 96.0 0.008 1.7E-07 55.3 4.4 66 199-266 134-207 (294)
15 TIGR03729 acc_ester putative p 95.5 0.01 2.3E-07 53.4 2.9 64 198-265 146-222 (239)
16 PF05184 SapB_1: Saposin-like 95.3 0.025 5.4E-07 36.6 3.5 36 41-76 2-37 (39)
17 PRK11340 phosphodiesterase Yae 95.1 0.011 2.4E-07 54.6 2.0 18 252-269 202-219 (271)
18 PRK11148 cyclic 3',5'-adenosin 95.1 0.013 2.7E-07 54.1 2.1 62 201-265 141-208 (275)
19 PF00149 Metallophos: Calcineu 94.5 0.022 4.7E-07 45.1 1.9 48 214-263 145-199 (200)
20 cd07383 MPP_Dcr2 Saccharomyces 94.5 0.016 3.5E-07 50.6 1.2 78 191-271 84-183 (199)
21 cd07392 MPP_PAE1087 Pyrobaculu 92.0 0.083 1.8E-06 44.7 1.7 47 217-265 122-174 (188)
22 cd07393 MPP_DR1119 Deinococcus 91.3 0.22 4.7E-06 44.8 3.7 70 194-268 138-209 (232)
23 PLN02533 probable purple acid 88.8 0.56 1.2E-05 46.4 4.5 63 199-263 263-333 (427)
24 PTZ00422 glideosome-associated 86.3 0.78 1.7E-05 45.0 3.8 61 203-265 198-261 (394)
25 cd07402 MPP_GpdQ Enterobacter 83.8 4.2 9E-05 35.9 7.1 34 193-230 20-53 (240)
26 COG1768 Predicted phosphohydro 80.4 1 2.2E-05 39.9 1.8 46 214-264 154-199 (230)
27 cd07404 MPP_MS158 Microscilla 73.8 1.9 4E-05 36.2 1.5 45 219-265 97-150 (166)
28 PF00149 Metallophos: Calcineu 71.6 2.6 5.6E-05 32.9 1.8 17 142-158 1-17 (200)
29 KOG2679|consensus 69.6 5.7 0.00012 37.5 3.7 63 197-263 189-254 (336)
30 cd07388 MPP_Tt1561 Thermus the 65.8 7.4 0.00016 35.2 3.7 59 196-263 131-190 (224)
31 cd07403 MPP_TTHA0053 Thermus t 65.7 4 8.7E-05 33.3 1.8 45 220-266 57-105 (129)
32 cd00838 MPP_superfamily metall 65.4 4.3 9.2E-05 31.0 1.8 46 222-269 70-120 (131)
33 PRK11148 cyclic 3',5'-adenosin 63.0 5.3 0.00012 36.6 2.3 15 139-153 12-26 (275)
34 cd07397 MPP_DevT Myxococcus xa 62.7 8.2 0.00018 35.4 3.4 48 217-264 145-208 (238)
35 TIGR00619 sbcd exonuclease Sbc 62.0 4.2 9E-05 37.2 1.4 15 142-156 1-15 (253)
36 COG1409 Icc Predicted phosphoh 61.0 6.3 0.00014 35.2 2.4 66 199-264 122-193 (301)
37 COG0420 SbcD DNA repair exonuc 58.6 4.9 0.00011 38.8 1.3 16 142-157 1-17 (390)
38 cd07383 MPP_Dcr2 Saccharomyces 58.5 5.9 0.00013 34.3 1.7 15 141-155 2-16 (199)
39 KOG1340|consensus 57.6 20 0.00043 32.5 4.9 67 39-108 126-204 (218)
40 KOG1340|consensus 57.4 35 0.00076 30.9 6.5 67 38-109 34-112 (218)
41 COG2129 Predicted phosphoester 57.3 12 0.00027 34.0 3.5 62 195-263 119-186 (226)
42 PHA02546 47 endonuclease subun 56.0 6.4 0.00014 37.6 1.6 14 142-155 1-14 (340)
43 cd00840 MPP_Mre11_N Mre11 nucl 55.5 6.4 0.00014 34.0 1.4 15 143-157 1-15 (223)
44 TIGR00583 mre11 DNA repair pro 53.0 9.1 0.0002 37.8 2.1 16 140-155 2-17 (405)
45 cd07385 MPP_YkuE_C Bacillus su 52.7 8.3 0.00018 33.6 1.6 19 252-270 154-172 (223)
46 KOG1378|consensus 51.0 11 0.00024 37.7 2.3 65 199-265 272-345 (452)
47 cd07407 MPP_YHR202W_N Saccharo 48.9 12 0.00025 35.0 2.1 49 217-268 187-235 (282)
48 COG1409 Icc Predicted phosphoh 48.0 10 0.00022 33.9 1.5 13 142-154 1-13 (301)
49 PF12850 Metallophos_2: Calcin 47.4 12 0.00025 30.3 1.6 43 219-267 81-124 (156)
50 PRK10966 exonuclease subunit S 46.9 11 0.00024 37.0 1.7 15 142-156 1-15 (407)
51 PRK04036 DNA polymerase II sma 45.6 18 0.0004 36.5 3.0 18 138-155 240-257 (504)
52 TIGR03729 acc_ester putative p 41.7 14 0.00029 33.1 1.3 11 143-153 1-11 (239)
53 cd07385 MPP_YkuE_C Bacillus su 39.0 17 0.00037 31.5 1.5 15 256-270 185-199 (223)
54 PRK05340 UDP-2,3-diacylglucosa 38.6 18 0.00039 32.5 1.6 14 142-155 1-14 (241)
55 cd07425 MPP_Shelphs Shewanella 35.2 17 0.00036 32.2 0.8 26 244-271 161-187 (208)
56 PRK13516 gamma-glutamyl:cystei 34.3 49 0.0011 32.3 3.9 72 193-264 66-140 (373)
57 COG1408 Predicted phosphohydro 34.0 25 0.00054 33.0 1.8 24 245-268 204-228 (284)
58 PF03489 SapB_2: Saposin-like 33.6 17 0.00037 22.6 0.5 29 73-102 3-32 (35)
59 PRK09419 bifunctional 2',3'-cy 33.0 20 0.00043 40.0 1.1 69 188-264 212-280 (1163)
60 TIGR01089 fucI L-fucose isomer 32.2 86 0.0019 32.5 5.3 38 196-233 149-186 (587)
61 PF14582 Metallophos_3: Metall 32.0 27 0.00057 32.3 1.5 62 196-265 157-219 (255)
62 cd07410 MPP_CpdB_N Escherichia 31.3 21 0.00044 32.7 0.7 67 193-266 165-232 (277)
63 cd08166 MPP_Cdc1_like_1 unchar 27.7 25 0.00055 31.2 0.6 42 222-270 112-153 (195)
64 cd07396 MPP_Nbla03831 Homo sap 26.9 35 0.00075 31.1 1.4 13 142-154 1-13 (267)
65 cd03556 L-fucose_isomerase L-f 26.5 1.3E+02 0.0027 31.3 5.4 39 196-234 146-184 (584)
66 cd07401 MPP_TMEM62_N Homo sapi 25.9 38 0.00083 30.8 1.5 14 144-157 2-15 (256)
67 cd03033 ArsC_15kD Arsenate Red 25.8 95 0.0021 24.9 3.6 35 39-73 6-49 (113)
68 PRK09453 phosphodiesterase; Pr 24.8 38 0.00083 28.8 1.2 12 142-153 1-12 (182)
69 TIGR01390 CycNucDiestase 2',3' 24.5 28 0.0006 36.3 0.3 72 184-264 169-240 (626)
70 cd07409 MPP_CD73_N CD73 ecto-5 24.4 27 0.00059 32.2 0.2 36 218-264 183-218 (281)
71 cd07395 MPP_CSTP1 Homo sapiens 22.8 51 0.0011 29.6 1.7 15 140-154 3-17 (262)
72 PF10652 DUF2480: Protein of u 22.4 2.4E+02 0.0053 24.5 5.6 57 197-261 100-158 (167)
73 KOG3782|consensus 22.1 2.3E+02 0.0051 24.8 5.4 57 18-76 4-87 (189)
74 KOG1432|consensus 21.6 75 0.0016 31.0 2.6 32 240-272 288-319 (379)
75 PRK10853 putative reductase; P 21.4 1.3E+02 0.0029 24.2 3.8 33 39-71 6-47 (118)
76 cd00841 MPP_YfcE Escherichia c 21.1 50 0.0011 26.9 1.2 12 143-154 1-12 (155)
77 cd03035 ArsC_Yffb Arsenate Red 21.1 1.4E+02 0.0029 23.5 3.6 33 39-71 5-46 (105)
78 COG1393 ArsC Arsenate reductas 21.0 1.1E+02 0.0024 24.7 3.2 34 39-72 7-49 (117)
79 cd07411 MPP_SoxB_N Thermus the 20.6 1.1E+02 0.0024 27.7 3.5 64 185-265 157-220 (264)
80 cd07397 MPP_DevT Myxococcus xa 20.4 58 0.0013 29.8 1.5 13 142-154 1-13 (238)
No 1
>KOG3770|consensus
Probab=100.00 E-value=3.4e-55 Score=430.70 Aligned_cols=261 Identities=41% Similarity=0.827 Sum_probs=232.5
Q ss_pred hHHHHHHHHHhhccCcccchhhHHHHHHHHHHHHhCCChHHHHHHHHHhccc--ccCCc----------chHHHHHHhcC
Q psy14383 25 NLRQVVEEIETSVMSSMSCTACKAGVGLLQYYIKSGRTVADIEKMSYKFCVT--FQTPR----------GEVVYVLKRVK 92 (287)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~C~~C~~~l~~l~~~~~~~~~~~~i~~~~~~lC~~--i~~~~----------~~v~~vL~~~~ 92 (287)
++.++...+.++......|..|+..+..++.....+.+...+..+++.+|.. ++... .++++|+.+..
T Consensus 8 ~l~~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~v~v~~~~~c~~~~~~~~~vc~~~~~~f~~~f~~v~~r~~ 87 (577)
T KOG3770|consen 8 FLLNLAKVIFTSKVDKAQCTFCEKELSNAQKFPARISTNCTVIVFAVAVCELFVIEPTPVCTWIIDEFNDEFFDVFVRSA 87 (577)
T ss_pred HHHHHHHHhhccccccchhhhhhhhhhhHHhhhhcccccchhhhhHHHHhccccccCcchhhHHHHHHHHHHHHHHHHHh
Confidence 3445556667676777799999999999999999999999999999999998 55543 67889999988
Q ss_pred CChhhhhhhccCCCCCCCCCC-CCcceeecCCCCCCCC-CCCCCCCCCCCceeEEEeeccCCCCCCCCCCcCCCCCCccc
Q psy14383 93 LTPEEVCSFVIGDACDDVKNP-THEWEVIFPPVPKPPT-MPLALPSESAPTFKVLHISDTHYDPHYEEGSNADCNEPLCC 170 (287)
Q Consensus 93 l~~~~~C~~~~~~~C~~p~~p-~~~w~v~~p~~~KP~~-~~~~~p~~~~~~~~vlhiSD~H~D~~Y~~Gs~a~C~~~~CC 170 (287)
..+..+|+.++++.|+...++ ..+|++++|+.+||+- +..+.|..+.+++|||||||+|+|+.|.+|++++|+.|+||
T Consensus 88 ~~~~~icg~~l~~~c~~~~~~~~~~w~~~l~~~~~~p~~p~~~~p~~~~p~~rvlhltDiH~D~~Y~~gs~a~c~~p~cc 167 (577)
T KOG3770|consen 88 NSPEEICGHFLPDTCGDIVDPLENNWNLTLPGPPKPPRLPKLPLPLKNNPTFRVLHLTDIHLDPDYSEGSDADCDCPMCC 167 (577)
T ss_pred cCHHHHhhcccCCccccccchhhhcceeeccCCCCCCCCCCCCCCCCCCCceeEEEeeccccCcccccCCcccccCcccc
Confidence 889999999998899988764 5689999998778773 33344445568999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHhhcc--------------------------------------
Q psy14383 171 RATSGPPLSPQTRAGRWGDYRKCDTPKRTVDHMLQHISTTHT-------------------------------------- 212 (287)
Q Consensus 171 r~~~~~~~~~~~~Ag~~G~y~~CD~P~~l~~s~l~~I~~~~~-------------------------------------- 212 (287)
|.+.+.+...+.+||+||+|+.||+|++|++++|++|+++++
T Consensus 168 r~s~~~p~~~~~~Ag~wG~y~~CD~P~~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~ 247 (577)
T KOG3770|consen 168 RNSDGTPSGTKVAAGPWGDYGKCDSPKRLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEY 247 (577)
T ss_pred ccCCCCCCCccccCCCCCCcCCCCCCHHHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHh
Confidence 999888877778999999999999999999999999999864
Q ss_pred --------------------------------------------------------------------------------
Q psy14383 213 -------------------------------------------------------------------------------- 212 (287)
Q Consensus 213 -------------------------------------------------------------------------------- 212 (287)
T Consensus 248 FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~ 327 (577)
T KOG3770|consen 248 FPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCS 327 (577)
T ss_pred CCCCceeeecccCCCCcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEecccccc
Confidence
Q ss_pred -------------------------ccccCCCEEEEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCccccccEE
Q psy14383 213 -------------------------SAEFSGEKVHVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFDEFE 267 (287)
Q Consensus 213 -------------------------~Ae~~~ekV~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f~ 267 (287)
+||++||+|||+||||||...|+..|+..|.++++||++||+||||||+|.|+|+
T Consensus 328 ~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~GekVhil~HIPpG~~~c~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 328 APNFWLYANQTDPIDQLQWFVDQLQEAESAGEKVHILGHIPPGDGVCLEGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred ccceeeeecCCCchHHhhHHHHHHHHHHhcCCEEEEEEeeCCCCcchhhhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCceeEEEeee
Q psy14383 268 LFYDKEDMSRTTNIASTRL 286 (287)
Q Consensus 268 v~~~~~~~~~p~~v~~i~~ 286 (287)
++|++.+ ++|++|+||+-
T Consensus 408 v~yde~~-~~p~~v~~i~~ 425 (577)
T KOG3770|consen 408 VFYDEET-GHPIAVAYIGP 425 (577)
T ss_pred EEecccc-CCceeeeeccc
Confidence 9999875 89999999973
No 2
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=100.00 E-value=9e-33 Score=256.03 Aligned_cols=138 Identities=54% Similarity=0.994 Sum_probs=124.1
Q ss_pred EEEeeccCCCCCCCCCCc--CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHhhcc---------
Q psy14383 144 VLHISDTHYDPHYEEGSN--ADCNEPLCCRATSGPPLSPQTRAGRWGDYRKCDTPKRTVDHMLQHISTTHT--------- 212 (287)
Q Consensus 144 vlhiSD~H~D~~Y~~Gs~--a~C~~~~CCr~~~~~~~~~~~~Ag~~G~y~~CD~P~~l~~s~l~~I~~~~~--------- 212 (287)
||||||||+|+.|.+|++ ++|.++.|||..++ ....+||+||+| .||+|+.|+++++++|++.++
T Consensus 1 ~l~~sDiH~D~~Y~~~~~~~~~C~~~~~~~~~~~---~~~~~~~~~G~~-~CD~p~~l~~s~l~~i~~~~~~~dfii~tG 76 (296)
T cd00842 1 FLHISDIHYDPLYKVGSEYSANCHSPLCCRDESG---DISPPAGPWGDY-GCDSPWRLVESALEAIKKNHPKPDFILWTG 76 (296)
T ss_pred CEEeeccCCCCCCcCCCCCcCCCCCCCccCCCCC---CCCCCCCCCcCc-CCCCcHHHHHHHHHHHHHhCCCCCEEEEcC
Confidence 799999999999999999 99999999998762 234589999999 699999999999999988732
Q ss_pred --------------------------------------------------------------------------------
Q psy14383 213 -------------------------------------------------------------------------------- 212 (287)
Q Consensus 213 -------------------------------------------------------------------------------- 212 (287)
T Consensus 77 D~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~ 156 (296)
T cd00842 77 DLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETF 156 (296)
T ss_pred CCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHh
Confidence
Q ss_pred ---------------------------------------------------ccccCCCEEEEecccCCCCCchh--hhHH
Q psy14383 213 ---------------------------------------------------SAEFSGEKVHVIGHIPPGHSDCL--RVWS 239 (287)
Q Consensus 213 ---------------------------------------------------~Ae~~~ekV~Ii~HIPpg~~~~~--~~w~ 239 (287)
+|++++++|||++|+||+...+. ..|+
T Consensus 157 ~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~~~v~I~~HiPp~~~~~~~~~~~~ 236 (296)
T cd00842 157 KKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAGEKVWIIGHIPPGVNSYDTLENWS 236 (296)
T ss_pred hcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCCCeEEEEeccCCCCcccccchHHH
Confidence 67788999999999999975444 3899
Q ss_pred HHHHHHHHHHHHhHhHhhcCccccccEEEEeCCCCCCCceeEEEee
Q psy14383 240 RNYYSIINRYEATIAAQFFGHTHFDEFELFYDKEDMSRTTNIASTR 285 (287)
Q Consensus 240 ~~~~~iv~ry~~~I~~~f~GHtH~D~f~v~~~~~~~~~p~~v~~i~ 285 (287)
++|.+|++||+++|+++|+||+|.|+|+++|+.++.++|++++|++
T Consensus 237 ~~~~~ii~~y~~~i~~~~~GH~H~d~~~~~~~~~~~~~~~~~~~~~ 282 (296)
T cd00842 237 ERYLQIINRYSDTIAGQFFGHTHRDEFRVFYDDNDTGEPINVALIA 282 (296)
T ss_pred HHHHHHHHHHHHhhheeeecccccceEEEEeCCCCCCCceEEEEec
Confidence 9999999999999999999999999999999887678999999986
No 3
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.52 E-value=8.7e-05 Score=67.57 Aligned_cols=70 Identities=17% Similarity=0.080 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhhccccc-cCCCEEEEecccCCCCCch---h------hhHHHHHHHHHHHHHHhHhHhhcCccccccEEE
Q psy14383 199 TVDHMLQHISTTHTSAE-FSGEKVHVIGHIPPGHSDC---L------RVWSRNYYSIINRYEATIAAQFFGHTHFDEFEL 268 (287)
Q Consensus 199 l~~s~l~~I~~~~~~Ae-~~~ekV~Ii~HIPpg~~~~---~------~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v 268 (287)
+-...++||++.+++++ ++++.++|++|+||..... . ..-.+.|.+++++| -|.+.|+||+|.+.+..
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~V~~v~~GH~H~~~~~~ 222 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKA--GVKAVFSGHYHRNAGGR 222 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhc--CceEEEECccccCCceE
Confidence 55778999999988775 5567899999999953211 1 11135688899988 48999999999998866
Q ss_pred Ee
Q psy14383 269 FY 270 (287)
Q Consensus 269 ~~ 270 (287)
+.
T Consensus 223 ~~ 224 (262)
T cd07395 223 YG 224 (262)
T ss_pred EC
Confidence 53
No 4
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.35 E-value=8.3e-05 Score=68.32 Aligned_cols=70 Identities=24% Similarity=0.385 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHhhccccccCCCEEEEecccCCCCCc---hhhhHH-HHHHHHHHHHHHhHhHhhcCccccccEEE
Q psy14383 198 RTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSD---CLRVWS-RNYYSIINRYEATIAAQFFGHTHFDEFEL 268 (287)
Q Consensus 198 ~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~---~~~~w~-~~~~~iv~ry~~~I~~~f~GHtH~D~f~v 268 (287)
.+-+..++||++.+.+++..+.+|+|++|.|+.... ....|+ +.+.+++++|. -|...|+||+|.+.+..
T Consensus 159 ~l~~~Ql~WL~~~L~~~~~~~~~viV~~Hhp~~~~~~~~~~~~~~~~~~~~ll~~~~-~V~~v~~GH~H~~~~~~ 232 (267)
T cd07396 159 GIGEEQLQWLRNELQEADANGEKVIIFSHFPLHPESTSPHGLLWNHEEVLSILRAYG-CVKACISGHDHEGGYAQ 232 (267)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCeEEEEEeccCCCCCCCccccccCHHHHHHHHHhCC-CEEEEEcCCcCCCCccc
Confidence 344677999999988887788999999999985322 223443 67899999975 47789999999998654
No 5
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.26 E-value=0.00031 Score=62.65 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=54.5
Q ss_pred HHHHHHHHhhccccccCCCEEEEecccCCCCCc-h---h------hhHHHHHHHHHHHHHHhHhHhhcCccccccEEEEe
Q psy14383 201 DHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSD-C---L------RVWSRNYYSIINRYEATIAAQFFGHTHFDEFELFY 270 (287)
Q Consensus 201 ~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~-~---~------~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v~~ 270 (287)
...++|+++.+++ ..+++|+|++|.|+.... . . ....+.+.+++++|.+ |.+.|+||.|.+.-+...
T Consensus 91 ~~ql~WL~~~L~~--~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~-V~~v~~GH~H~~~~~~~~ 167 (214)
T cd07399 91 DEVLQWANEVLKK--HPDRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDN-VFMVLSGHVHGAGRTTLV 167 (214)
T ss_pred HHHHHHHHHHHHH--CCCCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCC-EEEEEccccCCCceEEEc
Confidence 6688999988753 346789999999985321 1 1 1223468899999955 667999999999887775
Q ss_pred CCCCCCCcee
Q psy14383 271 DKEDMSRTTN 280 (287)
Q Consensus 271 ~~~~~~~p~~ 280 (287)
+.+..++++-
T Consensus 168 ~~~~~g~~v~ 177 (214)
T cd07399 168 SVGDAGRTVH 177 (214)
T ss_pred ccCCCCCEee
Confidence 4444466654
No 6
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=96.81 E-value=0.001 Score=59.30 Aligned_cols=68 Identities=16% Similarity=0.185 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhhccccccCCCEEEEecccCCCCCch--hhhH----HHHHHHHHHHHHHhHhHhhcCccccccEEEE
Q psy14383 199 TVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSDC--LRVW----SRNYYSIINRYEATIAAQFFGHTHFDEFELF 269 (287)
Q Consensus 199 l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~~--~~~w----~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v~ 269 (287)
+-+..++|+++.+++++ +++++|+.|.||..... ...+ .+.+.+++.+| .-|.+.|+||+|.+.+.-.
T Consensus 126 ~~~~ql~wL~~~L~~~~--~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~v~~GH~H~~~~~~~ 199 (240)
T cd07402 126 LCAAQLDWLEAALAEAP--DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARH-PNVRAILCGHVHRPIDGSW 199 (240)
T ss_pred ECHHHHHHHHHHHHhCC--CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcC-CCeeEEEECCcCchHHeEE
Confidence 44567899998886665 67899999999853211 1111 46788999998 5588999999999876544
No 7
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=96.79 E-value=0.00087 Score=66.45 Aligned_cols=73 Identities=14% Similarity=0.264 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhhccccccCCCEEEEecccCCCC--CchhhhHH----------------HHHHHHHHHHHHhHhHhhcCc
Q psy14383 199 TVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGH--SDCLRVWS----------------RNYYSIINRYEATIAAQFFGH 260 (287)
Q Consensus 199 l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~--~~~~~~w~----------------~~~~~iv~ry~~~I~~~f~GH 260 (287)
|-+..|+||++.+.++...++.|+|+.|+|... ......|. .++.++|++|.+ |++.|+||
T Consensus 329 Ld~eQLaWLe~~La~a~a~~p~VVV~hHpPi~t~gi~~md~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPn-Vla~LsGH 407 (492)
T TIGR03768 329 LDAKRWDWLKAELARGQADGQLMIIAAHIPIAVSPIGSEMEWWLGAADANPDLQNAVSLTGLVTTLQKYPN-LLMWIAGH 407 (492)
T ss_pred eCHHHHHHHHHHHHhCcCCCceEEEEeCCCcccCCccchhhhccccccccccccccccHHHHHHHHhcCCC-eEEEEcCC
Confidence 447889999999987777889999999999853 22344555 379999999976 56999999
Q ss_pred cccccEEEEeCC
Q psy14383 261 THFDEFELFYDK 272 (287)
Q Consensus 261 tH~D~f~v~~~~ 272 (287)
.|+.-.+-+...
T Consensus 408 vHrn~v~a~~~p 419 (492)
T TIGR03768 408 RHLNTVKAFPSP 419 (492)
T ss_pred cccccccccCCC
Confidence 999888776544
No 8
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=96.77 E-value=0.0045 Score=50.72 Aligned_cols=45 Identities=20% Similarity=0.252 Sum_probs=29.9
Q ss_pred CEEEEecccCCCC-Cchhhh----HHHHHHHHHHHHHHhHhHhhcCcccccc
Q psy14383 219 EKVHVIGHIPPGH-SDCLRV----WSRNYYSIINRYEATIAAQFFGHTHFDE 265 (287)
Q Consensus 219 ekV~Ii~HIPpg~-~~~~~~----w~~~~~~iv~ry~~~I~~~f~GHtH~D~ 265 (287)
..-+++.|.||-. .+.... -.+.+.+.++++. ....+|||+|...
T Consensus 68 ~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~i~GH~H~~~ 117 (135)
T cd07379 68 DTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVR--PKLHVFGHIHEGY 117 (135)
T ss_pred CCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHC--CcEEEEcCcCCcC
Confidence 3445677999943 222211 1356788888775 4778999999985
No 9
>smart00741 SapB Saposin (B) Domains. Present in multiple copies in prosaposin and in pulmonary surfactant-associated protein B. In plant aspartic proteinases, a saposin domain is circularly permuted. This causes the prediction algorithm to predict two such domains, where only one is truly present.
Probab=96.73 E-value=0.0034 Score=45.48 Aligned_cols=63 Identities=27% Similarity=0.545 Sum_probs=48.8
Q ss_pred cchhhHHHHHHHHHHHHhCCChHHHHHHHHHhcccccC-Cc-----------chHHHHHHhcCCChhhhhhhccCCCC
Q psy14383 42 SCTACKAGVGLLQYYIKSGRTVADIEKMSYKFCVTFQT-PR-----------GEVVYVLKRVKLTPEEVCSFVIGDAC 107 (287)
Q Consensus 42 ~C~~C~~~l~~l~~~~~~~~~~~~i~~~~~~lC~~i~~-~~-----------~~v~~vL~~~~l~~~~~C~~~~~~~C 107 (287)
.|..|+.+++.++.++..+.+.+.+.+.+..+|..+.. .. +.+++.+.+ ..+|+.+|..+ ..|
T Consensus 2 ~C~~C~~~v~~~~~~~~~~~~~~~i~~~~~~~C~~~~~~~~~~C~~~v~~~~~~ii~~i~~-~~~p~~iC~~l--~~C 76 (76)
T smart00741 2 LCELCEDVVKQLENLLKDNKTEEEIKKALEKVCKKLPKSLSDQCKEFVDQYGPEIIDLLEQ-GLDPKDVCQKL--GLC 76 (76)
T ss_pred cChHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCHHHHHHHc--CCC
Confidence 69999999999999999887778899999999998431 11 445566655 34599999976 356
No 10
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=96.47 E-value=0.0028 Score=57.87 Aligned_cols=66 Identities=18% Similarity=0.269 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHhhccccccCCCEEEEecccCCCCCch---hhhHHHHHHHHHHHHHHhHhHhhcCccccccE
Q psy14383 197 KRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSDC---LRVWSRNYYSIINRYEATIAAQFFGHTHFDEF 266 (287)
Q Consensus 197 ~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~~---~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f 266 (287)
..+-...++||++.++++++ +.++|++|.|+..... .....+.+.+++++|. |...|+||+|..+.
T Consensus 147 ~~~~~~Q~~wL~~~L~~~~~--~~~iv~~H~P~~~~~~~~~~~~~~~~l~~l~~~~~--v~~vl~GH~H~~~~ 215 (277)
T cd07378 147 GKLAEEQLAWLEKTLAASTA--DWKIVVGHHPIYSSGEHGPTSCLVDRLLPLLKKYK--VDAYLSGHDHNLQH 215 (277)
T ss_pred hhhHHHHHHHHHHHHHhcCC--CeEEEEeCccceeCCCCCCcHHHHHHHHHHHHHcC--CCEEEeCCccccee
Confidence 46778899999999876665 6889999999853211 1233567899999985 78899999998653
No 11
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=96.45 E-value=0.0016 Score=53.47 Aligned_cols=47 Identities=13% Similarity=0.055 Sum_probs=34.2
Q ss_pred EEecccCCCCCchhhh----HHHHHHHHHHHHHHhHhHhhcCccccccEEEEe
Q psy14383 222 HVIGHIPPGHSDCLRV----WSRNYYSIINRYEATIAAQFFGHTHFDEFELFY 270 (287)
Q Consensus 222 ~Ii~HIPpg~~~~~~~----w~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v~~ 270 (287)
++++|.||........ -.+.+.++++++ -+...++||+|......+.
T Consensus 81 iv~~Hhp~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~l~GH~H~~~~~~~~ 131 (144)
T cd07400 81 IVVLHHPLVPPPGSGRERLLDAGDALKLLAEA--GVDLVLHGHKHVPYVGNIS 131 (144)
T ss_pred EEEecCCCCCCCccccccCCCHHHHHHHHHHc--CCCEEEECCCCCcCeeecc
Confidence 8999999965211111 135689999988 4788999999999876654
No 12
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=96.39 E-value=0.0021 Score=64.23 Aligned_cols=68 Identities=16% Similarity=0.075 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhhccccccCCCEEEEecccCCCCC-----c-hhhhH----HHHHHHHHHHHHHhHhHhhcCccccccEEE
Q psy14383 199 TVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHS-----D-CLRVW----SRNYYSIINRYEATIAAQFFGHTHFDEFEL 268 (287)
Q Consensus 199 l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~-----~-~~~~w----~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v 268 (287)
+-+..++||++++++ ..++.|+|+.|+|+-.. + ..+.. .+++.+++++|.+ |.+.|+||+|.+.+.-
T Consensus 320 L~eeQL~WLeqeLa~--a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~n~~eLldLL~~ypn-V~aVfsGHvH~n~i~~ 396 (496)
T TIGR03767 320 LGQTQFKWIKDTLRA--SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRHLGTELVSLLLEHPN-VLAWVNGHTHSNKITA 396 (496)
T ss_pred cCHHHHHHHHHHHhc--CCCCCEEEEECCCCccccccccccccccccccCHHHHHHHHhcCCC-ceEEEECCcCCCcccc
Confidence 557889999998854 45678999999997321 1 11111 2579999999965 5679999999997544
Q ss_pred E
Q psy14383 269 F 269 (287)
Q Consensus 269 ~ 269 (287)
+
T Consensus 397 ~ 397 (496)
T TIGR03767 397 H 397 (496)
T ss_pred c
Confidence 3
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.14 E-value=0.0033 Score=57.55 Aligned_cols=66 Identities=15% Similarity=0.202 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHhhccccccCCCEEEEecccCCCCCchhhhH-HHHHHHHHHHHHHhHhHhhcCccccccE
Q psy14383 198 RTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSDCLRVW-SRNYYSIINRYEATIAAQFFGHTHFDEF 266 (287)
Q Consensus 198 ~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~~~~~w-~~~~~~iv~ry~~~I~~~f~GHtH~D~f 266 (287)
.+-+..++|+++.+.++++ +.+++|++|.|+........+ ...|.+++++| . |...|+||+|.++.
T Consensus 146 ~l~~~ql~wL~~~L~~~~~-~~~~IV~~HhP~~~~~~~~~~~~~~~~~ll~~~-~-v~~vl~GH~H~~~~ 212 (256)
T cd07401 146 SLDKKLLDRLEKELEKSTN-SNYTIWFGHYPTSTIISPSAKSSSKFKDLLKKY-N-VTAYLCGHLHPLGG 212 (256)
T ss_pred cCCHHHHHHHHHHHHhccc-CCeEEEEEcccchhccCCCcchhHHHHHHHHhc-C-CcEEEeCCccCCCc
Confidence 3456778888887755543 347899999999532111111 23389999998 3 78899999999988
No 14
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.01 E-value=0.008 Score=55.27 Aligned_cols=66 Identities=17% Similarity=0.155 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhccccccCC-CEEEEecccCCCCCch-------hhhHHHHHHHHHHHHHHhHhHhhcCccccccE
Q psy14383 199 TVDHMLQHISTTHTSAEFSG-EKVHVIGHIPPGHSDC-------LRVWSRNYYSIINRYEATIAAQFFGHTHFDEF 266 (287)
Q Consensus 199 l~~s~l~~I~~~~~~Ae~~~-ekV~Ii~HIPpg~~~~-------~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f 266 (287)
+-...++||++.+.++++++ ..+++++|.|+-.... .....+.+.+|+++| -|...|+||+|.-+-
T Consensus 134 ~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~--~v~~vl~GH~H~y~r 207 (294)
T cd00839 134 PGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKY--GVDLVLSGHVHAYER 207 (294)
T ss_pred CCcHHHHHHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHh--CCCEEEEccceeeEe
Confidence 34678889998887665544 4589999999843211 223446788999998 378899999998654
No 15
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=95.48 E-value=0.01 Score=53.39 Aligned_cols=64 Identities=19% Similarity=0.334 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHhhccccccCCCEEEEecccCCCCC-----chhhhH--------HHHHHHHHHHHHHhHhHhhcCccccc
Q psy14383 198 RTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHS-----DCLRVW--------SRNYYSIINRYEATIAAQFFGHTHFD 264 (287)
Q Consensus 198 ~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~-----~~~~~w--------~~~~~~iv~ry~~~I~~~f~GHtH~D 264 (287)
.+.+..++|+++.++++ .+++++++.|.||-.. ...+.| +..+.++|++| -|+..++||+|..
T Consensus 146 ~~~~~~l~~l~~~l~~~--~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~--~v~~~i~GH~H~~ 221 (239)
T TIGR03729 146 ERTAIVLKQLKKQLNQL--DNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY--EIKDVIFGHLHRR 221 (239)
T ss_pred HHHHHHHHHHHHHHHhc--CCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHh--CCCEEEECCccCC
Confidence 56788899999887544 3467999999998321 011234 26789999999 5888999999998
Q ss_pred c
Q psy14383 265 E 265 (287)
Q Consensus 265 ~ 265 (287)
.
T Consensus 222 ~ 222 (239)
T TIGR03729 222 F 222 (239)
T ss_pred C
Confidence 5
No 16
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=95.29 E-value=0.025 Score=36.58 Aligned_cols=36 Identities=28% Similarity=0.421 Sum_probs=33.3
Q ss_pred ccchhhHHHHHHHHHHHHhCCChHHHHHHHHHhccc
Q psy14383 41 MSCTACKAGVGLLQYYIKSGRTVADIEKMSYKFCVT 76 (287)
Q Consensus 41 ~~C~~C~~~l~~l~~~~~~~~~~~~i~~~~~~lC~~ 76 (287)
..|..|+.++..++.++..+.+.+.|.+.+.++|..
T Consensus 2 ~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~ 37 (39)
T PF05184_consen 2 DECDICKFVVKEIEKLLKNNKTEEEIKKALEKACNK 37 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHTT
T ss_pred CcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHhh
Confidence 369999999999999999999999999999999974
No 17
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=95.14 E-value=0.011 Score=54.56 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=15.2
Q ss_pred hHhHhhcCccccccEEEE
Q psy14383 252 TIAAQFFGHTHFDEFELF 269 (287)
Q Consensus 252 ~I~~~f~GHtH~D~f~v~ 269 (287)
-+--+|+||||-.|+++-
T Consensus 202 ~~dL~lsGHTHGGQi~lP 219 (271)
T PRK11340 202 PWDLMLCGHTHGGQLRVP 219 (271)
T ss_pred CCCEEEeccccCCeEEcc
Confidence 366799999999999863
No 18
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=95.07 E-value=0.013 Score=54.05 Aligned_cols=62 Identities=18% Similarity=0.293 Sum_probs=39.3
Q ss_pred HHHHHHHHhhccccccCCCEEEEecc-cCC--CCC--chhhhH-HHHHHHHHHHHHHhHhHhhcCcccccc
Q psy14383 201 DHMLQHISTTHTSAEFSGEKVHVIGH-IPP--GHS--DCLRVW-SRNYYSIINRYEATIAAQFFGHTHFDE 265 (287)
Q Consensus 201 ~s~l~~I~~~~~~Ae~~~ekV~Ii~H-IPp--g~~--~~~~~w-~~~~~~iv~ry~~~I~~~f~GHtH~D~ 265 (287)
+..++|+++.+.++.+ ..++|+.| .|. |.. +....+ .+.|.+++++|.+ |++.|+||+|.+.
T Consensus 141 ~~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~-v~~vl~GH~H~~~ 208 (275)
T PRK11148 141 EYQLEWLERKLADAPE--RHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPN-VKAILCGHIHQEL 208 (275)
T ss_pred HHHHHHHHHHHhhCCC--CCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCC-ceEEEecccChHH
Confidence 5677999988866543 34445454 452 211 111112 2579999999954 6789999999864
No 19
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=94.50 E-value=0.022 Score=45.12 Aligned_cols=48 Identities=23% Similarity=0.307 Sum_probs=34.1
Q ss_pred cccCCCEEEEecccCCCCCchh-------hhHHHHHHHHHHHHHHhHhHhhcCcccc
Q psy14383 214 AEFSGEKVHVIGHIPPGHSDCL-------RVWSRNYYSIINRYEATIAAQFFGHTHF 263 (287)
Q Consensus 214 Ae~~~ekV~Ii~HIPpg~~~~~-------~~w~~~~~~iv~ry~~~I~~~f~GHtH~ 263 (287)
.+..+..++|++|.|+...... ....+.+..++.++ -|...|+||+|.
T Consensus 145 ~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~GH~H~ 199 (200)
T PF00149_consen 145 EAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKY--NVDLVLSGHTHR 199 (200)
T ss_dssp HEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHT--TCSEEEEESSSS
T ss_pred ccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhC--CCCEEEeCceec
Confidence 4455679999999999753221 23445666666655 488999999996
No 20
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=94.47 E-value=0.016 Score=50.56 Aligned_cols=78 Identities=17% Similarity=0.222 Sum_probs=51.8
Q ss_pred CCCCCChhHHHHHHHHHHhhccccc---cCCCEEEEecccCCCCCchhhhH-------------------HHHHHHHHHH
Q psy14383 191 RKCDTPKRTVDHMLQHISTTHTSAE---FSGEKVHVIGHIPPGHSDCLRVW-------------------SRNYYSIINR 248 (287)
Q Consensus 191 ~~CD~P~~l~~s~l~~I~~~~~~Ae---~~~ekV~Ii~HIPpg~~~~~~~w-------------------~~~~~~iv~r 248 (287)
++.|.+-.+-++.++|+.+.+.+.+ .....+++..|+||-. ....| +..+.+.+.+
T Consensus 84 GNHD~~g~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~--~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~ 161 (199)
T cd07383 84 GNHDGYDWIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPE--YREVWEGKGKVPGINNEKVCCPKINSGLFKALLE 161 (199)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHH--HHhhhcccCCCCccCCcccCCCcCCcHHHHHHHH
Confidence 4566666666777888877665442 2346789999999832 11122 2346666666
Q ss_pred HHHhHhHhhcCccccccEEEEeC
Q psy14383 249 YEATIAAQFFGHTHFDEFELFYD 271 (287)
Q Consensus 249 y~~~I~~~f~GHtH~D~f~v~~~ 271 (287)
+ .-|.+.|+||+|..+|...+.
T Consensus 162 ~-~~v~~v~~GH~H~~~~~~~~~ 183 (199)
T cd07383 162 R-GDVKGVFCGHDHGNDFCGRYN 183 (199)
T ss_pred c-CCeEEEEeCCCCCcceecccC
Confidence 6 458899999999988766544
No 21
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=92.03 E-value=0.083 Score=44.67 Aligned_cols=47 Identities=21% Similarity=0.268 Sum_probs=33.8
Q ss_pred CCCEEEEecccCCCC--Cchhh----hHHHHHHHHHHHHHHhHhHhhcCcccccc
Q psy14383 217 SGEKVHVIGHIPPGH--SDCLR----VWSRNYYSIINRYEATIAAQFFGHTHFDE 265 (287)
Q Consensus 217 ~~ekV~Ii~HIPpg~--~~~~~----~w~~~~~~iv~ry~~~I~~~f~GHtH~D~ 265 (287)
.+..++++.|-||-. .+... .-++.+.+++++|. ++..|+||+|...
T Consensus 122 ~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~--~~~~l~GH~H~~~ 174 (188)
T cd07392 122 LAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQ--PLLCICGHIHESR 174 (188)
T ss_pred CCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhC--CcEEEEecccccc
Confidence 456799999999932 22211 12467899999883 6889999999984
No 22
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=91.34 E-value=0.22 Score=44.81 Aligned_cols=70 Identities=16% Similarity=0.263 Sum_probs=48.0
Q ss_pred CCChhHHHHHHHHHHhhccccccCC--CEEEEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCccccccEEE
Q psy14383 194 DTPKRTVDHMLQHISTTHTSAEFSG--EKVHVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFDEFEL 268 (287)
Q Consensus 194 D~P~~l~~s~l~~I~~~~~~Ae~~~--ekV~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v 268 (287)
.....+....++|+++.++++.... ..++++.|.||-.... . ++.+.++++++ . |...|+||+|.-+-..
T Consensus 138 ~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~--~-~~~~~~~~~~~-~-v~~vl~GH~H~~~~~~ 209 (232)
T cd07393 138 EEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG--D-DSPISKLIEEY-G-VDICVYGHLHGVGRDR 209 (232)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC--C-HHHHHHHHHHc-C-CCEEEECCCCCCcccc
Confidence 3345566778889988776554332 3589999999832111 1 23578888887 3 7889999999876544
No 23
>PLN02533 probable purple acid phosphatase
Probab=88.79 E-value=0.56 Score=46.37 Aligned_cols=63 Identities=14% Similarity=0.105 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhhccccccCC-CEEEEecccCCCCCc-----h--hhhHHHHHHHHHHHHHHhHhHhhcCcccc
Q psy14383 199 TVDHMLQHISTTHTSAEFSG-EKVHVIGHIPPGHSD-----C--LRVWSRNYYSIINRYEATIAAQFFGHTHF 263 (287)
Q Consensus 199 l~~s~l~~I~~~~~~Ae~~~-ekV~Ii~HIPpg~~~-----~--~~~w~~~~~~iv~ry~~~I~~~f~GHtH~ 263 (287)
.....++||++.+++++++. ..+++++|.|+=... . .....+.+..++++| -|...|+||.|.
T Consensus 263 ~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~--~VdlvlsGH~H~ 333 (427)
T PLN02533 263 PGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKA--RVDLVFAGHVHA 333 (427)
T ss_pred CchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHh--CCcEEEecceec
Confidence 34688999999887665443 458889999973211 0 112345678888887 478899999995
No 24
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=86.29 E-value=0.78 Score=45.05 Aligned_cols=61 Identities=16% Similarity=0.085 Sum_probs=42.5
Q ss_pred HHHHHHhhccccccCCCEEEEecccCCCCC---chhhhHHHHHHHHHHHHHHhHhHhhcCcccccc
Q psy14383 203 MLQHISTTHTSAEFSGEKVHVIGHIPPGHS---DCLRVWSRNYYSIINRYEATIAAQFFGHTHFDE 265 (287)
Q Consensus 203 ~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~---~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~ 265 (287)
.++|+.+++..|++.-...+++||-|.=.. .....-...+..|+++|. |-.-+.||.|.=|
T Consensus 198 ~w~~L~~~L~~a~k~a~WkIVvGHhPIySsG~hg~~~~L~~~L~PLL~ky~--VdlYisGHDH~lq 261 (394)
T PTZ00422 198 AWQDLKATLEYAPKIADYIIVVGDKPIYSSGSSKGDSYLSYYLLPLLKDAQ--VDLYISGYDRNME 261 (394)
T ss_pred HHHHHHHHHHhhccCCCeEEEEecCceeecCCCCCCHHHHHHHHHHHHHcC--cCEEEEccccceE
Confidence 456777766556656678999999997321 111223346888999995 8899999999643
No 25
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=83.76 E-value=4.2 Score=35.90 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=22.9
Q ss_pred CCCChhHHHHHHHHHHhhccccccCCCEEEEecccCCC
Q psy14383 193 CDTPKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPG 230 (287)
Q Consensus 193 CD~P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg 230 (287)
...|...++.+++++++...++ +-|++.|-+.-+
T Consensus 20 ~~~~~~~l~~~~~~i~~~~~~~----d~vi~~GDl~~~ 53 (240)
T cd07402 20 GVDTAASLEAVLAHINALHPRP----DLVLVTGDLTDD 53 (240)
T ss_pred CcCHHHHHHHHHHHHHhcCCCC----CEEEECccCCCC
Confidence 4456677888888887653222 368888888754
No 26
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=80.37 E-value=1 Score=39.94 Aligned_cols=46 Identities=20% Similarity=0.266 Sum_probs=34.7
Q ss_pred cccCCCEEEEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCccccc
Q psy14383 214 AEFSGEKVHVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFD 264 (287)
Q Consensus 214 Ae~~~ekV~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D 264 (287)
-.+.+++|++|-|-||-.++..+ ..|.++++.+ .+.-.+|||.|.=
T Consensus 154 l~k~~~~fivM~HYPP~s~~~t~---~~~sevlee~--rv~~~lyGHlHgv 199 (230)
T COG1768 154 LPKGVSKFIVMTHYPPFSDDGTP---GPFSEVLEEG--RVSKCLYGHLHGV 199 (230)
T ss_pred cccCcCeEEEEEecCCCCCCCCC---cchHHHHhhc--ceeeEEeeeccCC
Confidence 35668999999999998765443 2477778855 4677899999974
No 27
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=73.75 E-value=1.9 Score=36.18 Aligned_cols=45 Identities=27% Similarity=0.342 Sum_probs=28.4
Q ss_pred CEEEEecccCCCCCch-------hh--hHHHHHHHHHHHHHHhHhHhhcCcccccc
Q psy14383 219 EKVHVIGHIPPGHSDC-------LR--VWSRNYYSIINRYEATIAAQFFGHTHFDE 265 (287)
Q Consensus 219 ekV~Ii~HIPpg~~~~-------~~--~w~~~~~~iv~ry~~~I~~~f~GHtH~D~ 265 (287)
.+++|+.|.||-.... .. .....+.++++++ -+...++||+|...
T Consensus 97 ~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILAD--PIDLWIHGHTHFNF 150 (166)
T ss_pred CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhc--CCCEEEECCccccc
Confidence 5789999999943110 11 1122355555553 47789999999874
No 28
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=71.56 E-value=2.6 Score=32.93 Aligned_cols=17 Identities=29% Similarity=0.364 Sum_probs=15.1
Q ss_pred eeEEEeeccCCCCCCCC
Q psy14383 142 FKVLHISDTHYDPHYEE 158 (287)
Q Consensus 142 ~~vlhiSD~H~D~~Y~~ 158 (287)
+||+++||+|++..+..
T Consensus 1 ~ri~~isD~H~~~~~~~ 17 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDS 17 (200)
T ss_dssp EEEEEEEBBTTTHHHHC
T ss_pred CeEEEEcCCCCCCcchh
Confidence 69999999999988765
No 29
>KOG2679|consensus
Probab=69.61 E-value=5.7 Score=37.48 Aligned_cols=63 Identities=14% Similarity=0.227 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHhhccccccCCCEEEEecccCCCC---CchhhhHHHHHHHHHHHHHHhHhHhhcCcccc
Q psy14383 197 KRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGH---SDCLRVWSRNYYSIINRYEATIAAQFFGHTHF 263 (287)
Q Consensus 197 ~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~---~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~ 263 (287)
...+...+.|+...++++++ +.++|+||-|.-. ......-.++++-|+++|. |-+-+.||.|-
T Consensus 189 ~~~~~~~l~~le~~L~~S~a--~wkiVvGHh~i~S~~~HG~T~eL~~~LlPiL~~n~--VdlY~nGHDHc 254 (336)
T KOG2679|consen 189 VKYLRALLSWLEVALKASRA--KWKIVVGHHPIKSAGHHGPTKELEKQLLPILEANG--VDLYINGHDHC 254 (336)
T ss_pred HHHHHHHHHHHHHHHHHhhc--ceEEEecccceehhhccCChHHHHHHHHHHHHhcC--CcEEEecchhh
Confidence 35677778888887755444 5889999999732 1222333456788888873 77889999996
No 30
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=65.77 E-value=7.4 Score=35.20 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=38.7
Q ss_pred ChhHHHHHHHHHHhhccccccCCCEEEEecccCC-CCCchhhhHHHHHHHHHHHHHHhHhHhhcCcccc
Q psy14383 196 PKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPP-GHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHF 263 (287)
Q Consensus 196 P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPp-g~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~ 263 (287)
|.++++..++.+... ...+.+++.|-|| |..- ...-+..++++|++|+..+ .+.||.|.
T Consensus 131 ~~~~~~~~l~~~~~~------~~~~~VLv~H~PP~g~g~-~h~GS~alr~~I~~~~P~l--~i~GHih~ 190 (224)
T cd07388 131 PAWVAEYRLKALWEL------KDYRKVFLFHTPPYHKGL-NEQGSHEVAHLIKTHNPLV--VLVGGKGQ 190 (224)
T ss_pred hhhHHHHHHHHHHhC------CCCCeEEEECCCCCCCCC-CccCHHHHHHHHHHhCCCE--EEEcCCce
Confidence 334455555555431 2347788999999 4311 2456778999999998544 48999993
No 31
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=65.70 E-value=4 Score=33.26 Aligned_cols=45 Identities=20% Similarity=0.272 Sum_probs=28.7
Q ss_pred EEEEecccCCCCCch----hhhHHHHHHHHHHHHHHhHhHhhcCccccccE
Q psy14383 220 KVHVIGHIPPGHSDC----LRVWSRNYYSIINRYEATIAAQFFGHTHFDEF 266 (287)
Q Consensus 220 kV~Ii~HIPpg~~~~----~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f 266 (287)
.-+++.|.||-.... ...-.+.+.+++.++. +...|+||+|...-
T Consensus 57 ~~Ilv~H~pp~~~~~~~~~~~~g~~~l~~~l~~~~--~~~vl~GH~H~~~~ 105 (129)
T cd07403 57 VDILLTHAPPAGIGDGEDFAHRGFEAFLDFIDRFR--PKLFIHGHTHLNYG 105 (129)
T ss_pred cCEEEECCCCCcCcCcccccccCHHHHHHHHHHHC--CcEEEEcCcCCCcC
Confidence 447888998842111 1112356777777763 67899999997644
No 32
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=65.38 E-value=4.3 Score=31.03 Aligned_cols=46 Identities=22% Similarity=0.204 Sum_probs=29.1
Q ss_pred EEecccCCCCCchhhh-----HHHHHHHHHHHHHHhHhHhhcCccccccEEEE
Q psy14383 222 HVIGHIPPGHSDCLRV-----WSRNYYSIINRYEATIAAQFFGHTHFDEFELF 269 (287)
Q Consensus 222 ~Ii~HIPpg~~~~~~~-----w~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v~ 269 (287)
+++.|.|+........ ....+..++.++ -+...|+||+|.......
T Consensus 70 i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 70 ILLTHGPPYDPLDELSPDEDPGSEALLELLEKY--GVDLVLSGHTHVYERREP 120 (131)
T ss_pred EEEeccCCCCCchhhcccchhhHHHHHHHHHHh--CCCEEEeCCeeccccccC
Confidence 8999999965322111 234455555554 456669999999876553
No 33
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=62.96 E-value=5.3 Score=36.60 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=12.8
Q ss_pred CCceeEEEeeccCCC
Q psy14383 139 APTFKVLHISDTHYD 153 (287)
Q Consensus 139 ~~~~~vlhiSD~H~D 153 (287)
...+||+||||+|+.
T Consensus 12 ~~~~~i~~iSD~Hl~ 26 (275)
T PRK11148 12 EARVRILQITDTHLF 26 (275)
T ss_pred CCCEEEEEEcCcccC
Confidence 356999999999983
No 34
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=62.65 E-value=8.2 Score=35.37 Aligned_cols=48 Identities=23% Similarity=0.466 Sum_probs=31.2
Q ss_pred CCCEEEEecccCC-CCC-----chhhhHH--------HHHHHHHHHHH--HhHhHhhcCccccc
Q psy14383 217 SGEKVHVIGHIPP-GHS-----DCLRVWS--------RNYYSIINRYE--ATIAAQFFGHTHFD 264 (287)
Q Consensus 217 ~~ekV~Ii~HIPp-g~~-----~~~~~w~--------~~~~~iv~ry~--~~I~~~f~GHtH~D 264 (287)
.+++-++++|-+| |.. -|-..|. ..+.+-|.+-+ -.+.-..|||.|.-
T Consensus 145 ~~~~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~ 208 (238)
T cd07397 145 PDLPLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHR 208 (238)
T ss_pred CCCCeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCc
Confidence 3567899999998 332 1333342 35666666655 23788899999985
No 35
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=61.98 E-value=4.2 Score=37.18 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=12.9
Q ss_pred eeEEEeeccCCCCCC
Q psy14383 142 FKVLHISDTHYDPHY 156 (287)
Q Consensus 142 ~~vlhiSD~H~D~~Y 156 (287)
+||+|+||+|++...
T Consensus 1 mkilh~SD~Hlg~~~ 15 (253)
T TIGR00619 1 MRILHTSDWHLGKTL 15 (253)
T ss_pred CEEEEEhhhcCCCcc
Confidence 589999999998753
No 36
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=60.97 E-value=6.3 Score=35.24 Aligned_cols=66 Identities=14% Similarity=0.122 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhhccccccC-CCEEEEecccCCCCC-----chhhhHHHHHHHHHHHHHHhHhHhhcCccccc
Q psy14383 199 TVDHMLQHISTTHTSAEFS-GEKVHVIGHIPPGHS-----DCLRVWSRNYYSIINRYEATIAAQFFGHTHFD 264 (287)
Q Consensus 199 l~~s~l~~I~~~~~~Ae~~-~ekV~Ii~HIPpg~~-----~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D 264 (287)
+-...++|+.+.+.++... +.+++++.|.|+-.. .....+......++.++...+...|.||.|..
T Consensus 122 ~~~~q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 122 LGAEQLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred ECHHHHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 4556788888877655554 246777777776431 11223345677777777655999999999998
No 37
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=58.61 E-value=4.9 Score=38.80 Aligned_cols=16 Identities=38% Similarity=0.590 Sum_probs=13.2
Q ss_pred eeEEEeeccCCC-CCCC
Q psy14383 142 FKVLHISDTHYD-PHYE 157 (287)
Q Consensus 142 ~~vlhiSD~H~D-~~Y~ 157 (287)
+||||+||+|++ ..|.
T Consensus 1 mkilHtSD~HLG~~~~~ 17 (390)
T COG0420 1 MKILHTSDWHLGSKQLN 17 (390)
T ss_pred CeeEEecccccchhhcc
Confidence 589999999999 4444
No 38
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=58.53 E-value=5.9 Score=34.32 Aligned_cols=15 Identities=33% Similarity=0.742 Sum_probs=13.1
Q ss_pred ceeEEEeeccCCCCC
Q psy14383 141 TFKVLHISDTHYDPH 155 (287)
Q Consensus 141 ~~~vlhiSD~H~D~~ 155 (287)
++||+||||+|+...
T Consensus 2 ~~ki~~isDlH~~~~ 16 (199)
T cd07383 2 KFKILQFADLHFGEG 16 (199)
T ss_pred ceEEEEEeeecccCC
Confidence 589999999999764
No 39
>KOG1340|consensus
Probab=57.64 E-value=20 Score=32.54 Aligned_cols=67 Identities=21% Similarity=0.429 Sum_probs=46.4
Q ss_pred CcccchhhHHHHHHHHHHHHh-CCChHHHHHHHHHhccc--ccCCc---------chHHHHHHhcCCChhhhhhhccCCC
Q psy14383 39 SSMSCTACKAGVGLLQYYIKS-GRTVADIEKMSYKFCVT--FQTPR---------GEVVYVLKRVKLTPEEVCSFVIGDA 106 (287)
Q Consensus 39 ~~~~C~~C~~~l~~l~~~~~~-~~~~~~i~~~~~~lC~~--i~~~~---------~~v~~vL~~~~l~~~~~C~~~~~~~ 106 (287)
...+|..|+.++..++..+.. ..+...+.......|.. +.... +.++..+.+ .++|+.+|..+. .
T Consensus 126 ~~~~C~~C~~~V~~~~~~l~d~~~~k~~~~~~~~~~ck~l~~~~~~Ck~fV~~y~p~~i~~l~~-~~~p~~vC~~l~--~ 202 (218)
T KOG1340|consen 126 AAGECELCRETVTEADTKLQDKPKTKGKIVSLLLKSCKSLPNYEQKCKQFVHEYGPQLITLLEE-GLDPHDVCTALG--A 202 (218)
T ss_pred cccccHHHHHHHHHHHHhcccchhHHHHHHHHHHhhccCCccchhHHHHHHHHhccHHHHHHHH-hhCchhHHHHhh--c
Confidence 367899999999999877765 33444566667777866 33322 445555544 469999999873 7
Q ss_pred CC
Q psy14383 107 CD 108 (287)
Q Consensus 107 C~ 108 (287)
|+
T Consensus 203 C~ 204 (218)
T KOG1340|consen 203 CP 204 (218)
T ss_pred CC
Confidence 97
No 40
>KOG1340|consensus
Probab=57.43 E-value=35 Score=30.93 Aligned_cols=67 Identities=19% Similarity=0.413 Sum_probs=47.1
Q ss_pred cCcccchhhHHHHHHHHHHHHhCCChHHHHHHHHHhcccccCC---c---------chHHHHHHhcCCChhhhhhhccCC
Q psy14383 38 MSSMSCTACKAGVGLLQYYIKSGRTVADIEKMSYKFCVTFQTP---R---------GEVVYVLKRVKLTPEEVCSFVIGD 105 (287)
Q Consensus 38 ~~~~~C~~C~~~l~~l~~~~~~~~~~~~i~~~~~~lC~~i~~~---~---------~~v~~vL~~~~l~~~~~C~~~~~~ 105 (287)
.+...|..|+.++.-++.++..+ ...|.+.+-..|..+... . +.++..+. ....|+.+|..+ .
T Consensus 34 r~~~~C~lCe~~v~~i~~~~~~~--~~~i~~~l~~~Ckkl~~~~~~~C~~fv~~y~~~ii~~l~-~~~~P~~vC~~l--~ 108 (218)
T KOG1340|consen 34 RSAEVCELCELVVKRIQEYLDKN--QNELKEDLHAECKKLPKAIPFECLSFVDSYLDPIIKELE-SGTAPEDVCKKL--N 108 (218)
T ss_pred CccchhHHHHHHHHHHHHhhccc--HHHHHHHHHHHHHHhcccchHHHHHHHHHhhhHHHHHHH-hccCHHHHHHHh--c
Confidence 35789999999999999999775 667777777779993222 2 11222221 237899999986 4
Q ss_pred CCCC
Q psy14383 106 ACDD 109 (287)
Q Consensus 106 ~C~~ 109 (287)
.|+.
T Consensus 109 lC~~ 112 (218)
T KOG1340|consen 109 LCSA 112 (218)
T ss_pred cCCc
Confidence 7974
No 41
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=57.34 E-value=12 Score=34.02 Aligned_cols=62 Identities=18% Similarity=0.298 Sum_probs=42.4
Q ss_pred CChhHHHHHHHHHHhhccccccCCCEEEEecccCCC-C-Cch----hhhHHHHHHHHHHHHHHhHhHhhcCcccc
Q psy14383 195 TPKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPG-H-SDC----LRVWSRNYYSIINRYEATIAAQFFGHTHF 263 (287)
Q Consensus 195 ~P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg-~-~~~----~~~w~~~~~~iv~ry~~~I~~~f~GHtH~ 263 (287)
.++..+.++++++-+....+. + +++-|-||- . .+. ...-+...++++++|+. ...+.||.|.
T Consensus 119 ~~E~~I~s~l~~~v~~~~~~~----~-Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP--~l~i~GHIHE 186 (226)
T COG2129 119 FSEDEIYSKLKSLVKKADNPV----N-ILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQP--LLGLHGHIHE 186 (226)
T ss_pred cCHHHHHHHHHHHHhcccCcc----e-EEEecCCCCCccccCCCCccccchHHHHHHHHHhCC--ceEEEeeecc
Confidence 356677787777766432111 1 889999993 2 222 22336789999999987 5678999996
No 42
>PHA02546 47 endonuclease subunit; Provisional
Probab=55.97 E-value=6.4 Score=37.57 Aligned_cols=14 Identities=36% Similarity=0.572 Sum_probs=12.3
Q ss_pred eeEEEeeccCCCCC
Q psy14383 142 FKVLHISDTHYDPH 155 (287)
Q Consensus 142 ~~vlhiSD~H~D~~ 155 (287)
+||+|+||+|++..
T Consensus 1 MKilhiSD~HLG~~ 14 (340)
T PHA02546 1 MKILLIGDQHLGVR 14 (340)
T ss_pred CeEEEEeeecCCCc
Confidence 58999999999864
No 43
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=55.48 E-value=6.4 Score=34.02 Aligned_cols=15 Identities=27% Similarity=0.448 Sum_probs=12.7
Q ss_pred eEEEeeccCCCCCCC
Q psy14383 143 KVLHISDTHYDPHYE 157 (287)
Q Consensus 143 ~vlhiSD~H~D~~Y~ 157 (287)
||+|+||+|++....
T Consensus 1 ~i~~~sD~Hlg~~~~ 15 (223)
T cd00840 1 RFLHTADWHLGKPLK 15 (223)
T ss_pred CeEEeccccCCcccc
Confidence 699999999997653
No 44
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=53.01 E-value=9.1 Score=37.78 Aligned_cols=16 Identities=25% Similarity=0.335 Sum_probs=13.8
Q ss_pred CceeEEEeeccCCCCC
Q psy14383 140 PTFKVLHISDTHYDPH 155 (287)
Q Consensus 140 ~~~~vlhiSD~H~D~~ 155 (287)
.++||||+||+|+...
T Consensus 2 ~~mKIlh~SD~HlG~~ 17 (405)
T TIGR00583 2 DTIRILVSTDNHVGYG 17 (405)
T ss_pred CceEEEEEcCCCCCCc
Confidence 5799999999999744
No 45
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=52.71 E-value=8.3 Score=33.55 Aligned_cols=19 Identities=32% Similarity=0.312 Sum_probs=15.5
Q ss_pred hHhHhhcCccccccEEEEe
Q psy14383 252 TIAAQFFGHTHFDEFELFY 270 (287)
Q Consensus 252 ~I~~~f~GHtH~D~f~v~~ 270 (287)
-+--++.||||.-|+++..
T Consensus 154 ~~dl~l~GHtHggqi~~~~ 172 (223)
T cd07385 154 GVDLQLSGHTHGGQIRLPG 172 (223)
T ss_pred CccEEEeccCCCCEEeccc
Confidence 4667889999999998853
No 46
>KOG1378|consensus
Probab=51.00 E-value=11 Score=37.71 Aligned_cols=65 Identities=20% Similarity=0.182 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhccccccC-CCEEEEecccCCCCCch----hhhHH----HHHHHHHHHHHHhHhHhhcCcccccc
Q psy14383 199 TVDHMLQHISTTHTSAEFS-GEKVHVIGHIPPGHSDC----LRVWS----RNYYSIINRYEATIAAQFFGHTHFDE 265 (287)
Q Consensus 199 l~~s~l~~I~~~~~~Ae~~-~ekV~Ii~HIPpg~~~~----~~~w~----~~~~~iv~ry~~~I~~~f~GHtH~D~ 265 (287)
......+||++.++++.++ -..+|+++|.|-..+.. ...+. ..+.+++.+|. |--.|+||-|.=|
T Consensus 272 ~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~--VDvvf~GHvH~YE 345 (452)
T KOG1378|consen 272 KGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYK--VDVVFWGHVHRYE 345 (452)
T ss_pred ccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhc--eeEEEeccceehh
Confidence 4567789999999888776 78899999999875322 23332 24667776664 5667999999744
No 47
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=48.95 E-value=12 Score=35.02 Aligned_cols=49 Identities=20% Similarity=0.298 Sum_probs=32.5
Q ss_pred CCCEEEEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCccccccEEE
Q psy14383 217 SGEKVHVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFDEFEL 268 (287)
Q Consensus 217 ~~ekV~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v 268 (287)
.-+.|++++|+.-..+ ..|.+...++.+++.++....+.||+|.-.+..
T Consensus 187 ~~DvIIvlsH~G~~~d---~~~~~~~~~la~~~~~id~~Ii~GHsH~~~~~~ 235 (282)
T cd07407 187 DVDLILVLGHMPVRDD---AEFKVLHDAIRKIFPDTPIQFLGGHSHVRDFTQ 235 (282)
T ss_pred CCCEEEEEeCCCCCCC---ccHHHHHHHHHHhCCCCCEEEEeCCccccccee
Confidence 4578999999966433 234444455666666655578999999755543
No 48
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=48.00 E-value=10 Score=33.93 Aligned_cols=13 Identities=38% Similarity=0.723 Sum_probs=11.9
Q ss_pred eeEEEeeccCCCC
Q psy14383 142 FKVLHISDTHYDP 154 (287)
Q Consensus 142 ~~vlhiSD~H~D~ 154 (287)
++|+||||+|+.+
T Consensus 1 ~~i~~isD~H~~~ 13 (301)
T COG1409 1 MRIAHISDLHLGA 13 (301)
T ss_pred CeEEEEecCcccc
Confidence 5899999999997
No 49
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=47.40 E-value=12 Score=30.34 Aligned_cols=43 Identities=19% Similarity=0.296 Sum_probs=24.9
Q ss_pred CEEEEecccCCCCCchhhhHH-HHHHHHHHHHHHhHhHhhcCccccccEE
Q psy14383 219 EKVHVIGHIPPGHSDCLRVWS-RNYYSIINRYEATIAAQFFGHTHFDEFE 267 (287)
Q Consensus 219 ekV~Ii~HIPpg~~~~~~~w~-~~~~~iv~ry~~~I~~~f~GHtH~D~f~ 267 (287)
..-+++.|-++... .+. +....++. ..-+...|+||+|.....
T Consensus 81 ~~~i~~~H~~~~~~----~~~~~~~~~~~~--~~~~~~~~~GH~H~~~~~ 124 (156)
T PF12850_consen 81 GFKILLSHGHPYDV----QWDPAELREILS--RENVDLVLHGHTHRPQVF 124 (156)
T ss_dssp TEEEEEESSTSSSS----TTTHHHHHHHHH--HTTSSEEEESSSSSEEEE
T ss_pred CCeEEEECCCCccc----ccChhhhhhhhc--ccCCCEEEcCCcccceEE
Confidence 44455566555331 122 22334444 345788899999997764
No 50
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=46.92 E-value=11 Score=37.04 Aligned_cols=15 Identities=33% Similarity=0.720 Sum_probs=12.6
Q ss_pred eeEEEeeccCCCCCC
Q psy14383 142 FKVLHISDTHYDPHY 156 (287)
Q Consensus 142 ~~vlhiSD~H~D~~Y 156 (287)
+||+|+||+|+...+
T Consensus 1 mkilh~SDlHlG~~~ 15 (407)
T PRK10966 1 MRILHTSDWHLGQNF 15 (407)
T ss_pred CEEEEEcccCCCCcc
Confidence 589999999998543
No 51
>PRK04036 DNA polymerase II small subunit; Validated
Probab=45.55 E-value=18 Score=36.54 Aligned_cols=18 Identities=22% Similarity=0.300 Sum_probs=14.7
Q ss_pred CCCceeEEEeeccCCCCC
Q psy14383 138 SAPTFKVLHISDTHYDPH 155 (287)
Q Consensus 138 ~~~~~~vlhiSD~H~D~~ 155 (287)
..+.++++++||+|++..
T Consensus 240 ~~~~~~i~~ISDlHlgs~ 257 (504)
T PRK04036 240 KDEKVYAVFISDVHVGSK 257 (504)
T ss_pred CCCccEEEEEcccCCCCc
Confidence 346689999999998764
No 52
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=41.70 E-value=14 Score=33.11 Aligned_cols=11 Identities=45% Similarity=0.570 Sum_probs=10.2
Q ss_pred eEEEeeccCCC
Q psy14383 143 KVLHISDTHYD 153 (287)
Q Consensus 143 ~vlhiSD~H~D 153 (287)
||+|+||+|+|
T Consensus 1 ki~~iSDlH~~ 11 (239)
T TIGR03729 1 KIAFSSDLHID 11 (239)
T ss_pred CEEEEEeecCC
Confidence 69999999997
No 53
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=39.02 E-value=17 Score=31.51 Aligned_cols=15 Identities=13% Similarity=0.118 Sum_probs=7.6
Q ss_pred hhcCccccccEEEEe
Q psy14383 256 QFFGHTHFDEFELFY 270 (287)
Q Consensus 256 ~f~GHtH~D~f~v~~ 270 (287)
..+|.-+.+...++=
T Consensus 185 ~~~G~~~~~~~~~~V 199 (223)
T cd07385 185 YDYGLYRKGGSQLYV 199 (223)
T ss_pred ccceEEEECCEEEEE
Confidence 345555555554443
No 54
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=38.61 E-value=18 Score=32.45 Aligned_cols=14 Identities=43% Similarity=0.691 Sum_probs=11.8
Q ss_pred eeEEEeeccCCCCC
Q psy14383 142 FKVLHISDTHYDPH 155 (287)
Q Consensus 142 ~~vlhiSD~H~D~~ 155 (287)
+|++||||+|+...
T Consensus 1 M~i~~iSDlHl~~~ 14 (241)
T PRK05340 1 MPTLFISDLHLSPE 14 (241)
T ss_pred CcEEEEeecCCCCC
Confidence 47999999998754
No 55
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=35.22 E-value=17 Score=32.21 Aligned_cols=26 Identities=19% Similarity=0.284 Sum_probs=18.5
Q ss_pred HHHHHHHHhHhHhhcCccccccEEE-EeC
Q psy14383 244 SIINRYEATIAAQFFGHTHFDEFEL-FYD 271 (287)
Q Consensus 244 ~iv~ry~~~I~~~f~GHtH~D~f~v-~~~ 271 (287)
++++++. .+..++||||.+..++ .++
T Consensus 161 ~~l~~~~--~~~iv~GHTh~~~~~~~~~~ 187 (208)
T cd07425 161 KVLERLG--AKRMVVGHTPQEGGIVTFCG 187 (208)
T ss_pred HHHHHcC--CCeEEEcCeeeecCceEEEC
Confidence 4455552 3678999999999886 444
No 56
>PRK13516 gamma-glutamyl:cysteine ligase; Provisional
Probab=34.35 E-value=49 Score=32.26 Aligned_cols=72 Identities=14% Similarity=0.169 Sum_probs=48.5
Q ss_pred CCCChhHHHHHHHHHHhhccccccCCCEEEEecccCCCCCchhhhH-HHHHHHHHHHHHHhHhHh-hcC-ccccc
Q psy14383 193 CDTPKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSDCLRVW-SRNYYSIINRYEATIAAQ-FFG-HTHFD 264 (287)
Q Consensus 193 CD~P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~~~~~w-~~~~~~iv~ry~~~I~~~-f~G-HtH~D 264 (287)
|.....+.+.+.+......+.|+..|-++.=+|=.|.+.......+ +.+|..|.++|..+.+-+ .|| |.|.+
T Consensus 66 ~~~~~el~~eL~~~r~~l~~~A~~~G~~lva~GthP~~~~~~~~it~~~RY~~l~~~~~~~~~~~~i~G~HVHvg 140 (373)
T PRK13516 66 CRDIDQALGQLSAMRDVLVQAADKLNIGICGGGTHPFQQWQRQRICDNPRFQYLSELYGYLAKQFTVFGQHVHIG 140 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeecCCCCCCccccCCCCcHHHHHHHHHhhhhhhhheeeeeEEEeC
Confidence 4455566666666666666688999999999998777543222222 467999999998654432 445 77765
No 57
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=34.02 E-value=25 Score=32.96 Aligned_cols=24 Identities=29% Similarity=0.376 Sum_probs=18.7
Q ss_pred HHHHHHH-hHhHhhcCccccccEEE
Q psy14383 245 IINRYEA-TIAAQFFGHTHFDEFEL 268 (287)
Q Consensus 245 iv~ry~~-~I~~~f~GHtH~D~f~v 268 (287)
++.+|.. =+--++.||||-.|+++
T Consensus 204 ~~~~~~~~~~dLvLSGHTHGGQi~~ 228 (284)
T COG1408 204 IILQLRLYGVDLVLSGHTHGGQIRL 228 (284)
T ss_pred eehhhccCcceEEEeccccCCeEEe
Confidence 4556654 47788999999999993
No 58
>PF03489 SapB_2: Saposin-like type B, region 2; InterPro: IPR008138 Saposins are small lysosomal proteins that serve as activators of various lysosomal lipid-degrading enzymes []. They probably act by isolating the lipid substrate from the membrane surroundings, thus making it more accessible to the soluble degradative enzymes. All mammalian saposins are synthesized as a single precursor molecule (prosaposin) which contains four Saposin-B domains, yielding the active saposins after proteolytic cleavage, and two Saposin-A domains that are removed in the activation reaction. The Saposin-B domains also occur in other proteins, many of them active in the lysis of membranes [, ].; PDB: 3BQQ_A 2RB3_B 2R0R_A 3BQP_A 2R1Q_A 1NKL_A 1L9L_A 1QDM_C 3RFI_A 4DDJ_A ....
Probab=33.59 E-value=17 Score=22.58 Aligned_cols=29 Identities=17% Similarity=0.575 Sum_probs=16.7
Q ss_pred hccc-ccCCcchHHHHHHhcCCChhhhhhhc
Q psy14383 73 FCVT-FQTPRGEVVYVLKRVKLTPEEVCSFV 102 (287)
Q Consensus 73 lC~~-i~~~~~~v~~vL~~~~l~~~~~C~~~ 102 (287)
.|+. +..+.+.++..|.+ .++|+.+|..+
T Consensus 3 ~C~~~V~~y~~~ii~~l~~-~~~p~~iC~~i 32 (35)
T PF03489_consen 3 ECKNFVDQYGPQIIQLLEK-QLDPQQICTKI 32 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TSTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh-cCChHHHHHHc
Confidence 3444 33333455554443 46799999865
No 59
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=33.00 E-value=20 Score=40.03 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=41.6
Q ss_pred CCCCCCCCChhHHHHHHHHHHhhccccccCCCEEEEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCccccc
Q psy14383 188 GDYRKCDTPKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFD 264 (287)
Q Consensus 188 G~y~~CD~P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D 264 (287)
|.+ .-..|...++..+..|++ +.=+-|++++|.............+.-.+|.++... |-+.+.||+|.-
T Consensus 212 g~~-~~~d~v~~~~~~v~~lk~------~gaDvII~l~H~G~~~~~~~~~~en~~~~la~~~~g-ID~Il~GHsH~~ 280 (1163)
T PRK09419 212 GKV-EVKNIVEEANKTIPEMKK------GGADVIVALAHSGIESEYQSSGAEDSVYDLAEKTKG-IDAIVAGHQHGL 280 (1163)
T ss_pred CcE-EECCHHHHHHHHHHHHHh------cCCCEEEEEeccCcCCCCCCCCcchHHHHHHHhCCC-CcEEEeCCCccc
Confidence 444 445565655555555542 123679999999765332222223345567766643 888899999985
No 60
>TIGR01089 fucI L-fucose isomerase. This enzyme catalyzes the first step in fucose metabolism, and has been characterized in Escherichia coli and Bacteroides thetaiotaomicron.
Probab=32.25 E-value=86 Score=32.50 Aligned_cols=38 Identities=16% Similarity=0.336 Sum_probs=34.2
Q ss_pred ChhHHHHHHHHHHhhccccccCCCEEEEecccCCCCCc
Q psy14383 196 PKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSD 233 (287)
Q Consensus 196 P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~ 233 (287)
|....+.++++++.-..-+.-+|.+...+|++|+|...
T Consensus 149 p~dV~eKll~faRAa~AV~~Lkgksyl~IG~~smGi~g 186 (587)
T TIGR01089 149 PEDVEEKLLRFARAGLAVASMRGKSYLSLGSVSMGIAG 186 (587)
T ss_pred cHHHHHHHHHHHHHHHHHHHhccCeEEEECCccCcccc
Confidence 89999999999998777788899999999999999754
No 61
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=32.00 E-value=27 Score=32.26 Aligned_cols=62 Identities=23% Similarity=0.366 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHHhhccccccCCCEEEEecccCC-CCCchhhhHHHHHHHHHHHHHHhHhHhhcCcccccc
Q psy14383 196 PKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPP-GHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFDE 265 (287)
Q Consensus 196 P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPp-g~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~ 265 (287)
|.+-.+..++.+ .+++ .++-+++-|.|| -..+....-+..++++|.+|+..|. +.||.|...
T Consensus 157 P~weaey~lk~l----~elk--~~r~IlLfhtpPd~~kg~~h~GS~~V~dlIk~~~P~iv--l~Ghihe~~ 219 (255)
T PF14582_consen 157 PAWEAEYSLKFL----RELK--DYRKILLFHTPPDLHKGLIHVGSAAVRDLIKTYNPDIV--LCGHIHESH 219 (255)
T ss_dssp EHHHHHHHHGGG----GGCT--SSEEEEEESS-BTBCTCTBTTSBHHHHHHHHHH--SEE--EE-SSS-EE
T ss_pred hHHHHHHHHHHH----Hhcc--cccEEEEEecCCccCCCcccccHHHHHHHHHhcCCcEE--Eecccccch
Confidence 555444444433 3444 346677799999 2222234556779999999997665 449999876
No 62
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=31.30 E-value=21 Score=32.70 Aligned_cols=67 Identities=16% Similarity=0.108 Sum_probs=39.0
Q ss_pred CCCChhHHHHHHHHHHhhccccccCCCEEEEecccCCCCCc-hhhhHHHHHHHHHHHHHHhHhHhhcCccccccE
Q psy14383 193 CDTPKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSD-CLRVWSRNYYSIINRYEATIAAQFFGHTHFDEF 266 (287)
Q Consensus 193 CD~P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~-~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f 266 (287)
-..|...++..++.+++ +.-+-|++++|....... ........-.++.+++.. |-..|.||+|.-..
T Consensus 165 ~~d~~~~~~~~v~~lr~------~~~D~IIvl~H~g~~~~~~~~~~~~~~~~~la~~~~~-vD~IlgGHsH~~~~ 232 (277)
T cd07410 165 FTDPVETAKKYVPKLRA------EGADVVVVLAHGGFERDLEESLTGENAAYELAEEVPG-IDAILTGHQHRRFP 232 (277)
T ss_pred EcCHHHHHHHHHHHHHH------cCCCEEEEEecCCcCCCcccccCCccHHHHHHhcCCC-CcEEEeCCCccccc
Confidence 34455545554554443 123579999999764321 122223344677777744 56689999997543
No 63
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=27.66 E-value=25 Score=31.24 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=29.9
Q ss_pred EEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCccccccEEEEe
Q psy14383 222 HVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFDEFELFY 270 (287)
Q Consensus 222 ~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D~f~v~~ 270 (287)
+++.|+|+-. .+.....+++.+| .+...|.||.|.-..-+..
T Consensus 112 i~lsH~P~~~-----~~~~~~~~~~~~~--~p~~Ifs~H~H~s~~~~~~ 153 (195)
T cd08166 112 IMLSHVPLLA-----EGGQALKHVVTDL--DPDLIFSAHRHKSSIFMYD 153 (195)
T ss_pred eeeecccccc-----cccHHHHHHHHhc--CceEEEEcCccceeeEEee
Confidence 8999999843 2222568889999 4566799999986544433
No 64
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=26.92 E-value=35 Score=31.10 Aligned_cols=13 Identities=31% Similarity=0.524 Sum_probs=11.1
Q ss_pred eeEEEeeccCCCC
Q psy14383 142 FKVLHISDTHYDP 154 (287)
Q Consensus 142 ~~vlhiSD~H~D~ 154 (287)
|||.+|||+|+..
T Consensus 1 ~r~~~iSD~H~~~ 13 (267)
T cd07396 1 FRFGIIADIQYAD 13 (267)
T ss_pred CeEEEEecccccc
Confidence 6899999999654
No 65
>cd03556 L-fucose_isomerase L-fucose isomerase (FucIase); FucIase converts L-fucose, an aldohexose, to its ketose form, which prepares it for aldol cleavage (similar to the isomerization of glucose during glycolysis). L-fucose (or 6-deoxy-L-galactose) is found in blood group determinants as well as in various oligo- and polysaccharides, and glycosides in mammals, bacteria and plants.
Probab=26.46 E-value=1.3e+02 Score=31.28 Aligned_cols=39 Identities=18% Similarity=0.349 Sum_probs=34.1
Q ss_pred ChhHHHHHHHHHHhhccccccCCCEEEEecccCCCCCch
Q psy14383 196 PKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSDC 234 (287)
Q Consensus 196 P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~~ 234 (287)
|....+.++++++.-..-+.-+|.+...+|++|+|...+
T Consensus 146 P~DV~eKll~faRAa~AV~~Lkgksyl~IG~~smGi~gs 184 (584)
T cd03556 146 PEDVKEKILRFARAAIAVASMRGKSYLSIGSVSMGIAGS 184 (584)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCeEEEECCccCccccc
Confidence 888999999999887777888999999999999997543
No 66
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=25.90 E-value=38 Score=30.77 Aligned_cols=14 Identities=36% Similarity=0.505 Sum_probs=11.8
Q ss_pred EEEeeccCCCCCCC
Q psy14383 144 VLHISDTHYDPHYE 157 (287)
Q Consensus 144 vlhiSD~H~D~~Y~ 157 (287)
|+||||+|+.....
T Consensus 2 ~~~iSDlH~g~~~~ 15 (256)
T cd07401 2 FVHISDIHVSSFHP 15 (256)
T ss_pred EEEecccccCCcCc
Confidence 78999999997654
No 67
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=25.79 E-value=95 Score=24.85 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=25.4
Q ss_pred CcccchhhHHHHHHHHH---------HHHhCCChHHHHHHHHHh
Q psy14383 39 SSMSCTACKAGVGLLQY---------YIKSGRTVADIEKMSYKF 73 (287)
Q Consensus 39 ~~~~C~~C~~~l~~l~~---------~~~~~~~~~~i~~~~~~l 73 (287)
...+|+.|+.++..|+. +.+.+.+.+++..++..+
T Consensus 6 ~~p~C~~crkA~~~L~~~gi~~~~~d~~~~p~s~~eL~~~l~~~ 49 (113)
T cd03033 6 EKPGCANNARQKALLEAAGHEVEVRDLLTEPWTAETLRPFFGDL 49 (113)
T ss_pred ECCCCHHHHHHHHHHHHcCCCcEEeehhcCCCCHHHHHHHHHHc
Confidence 45689999999988865 444566777777776643
No 68
>PRK09453 phosphodiesterase; Provisional
Probab=24.75 E-value=38 Score=28.81 Aligned_cols=12 Identities=42% Similarity=0.567 Sum_probs=10.3
Q ss_pred eeEEEeeccCCC
Q psy14383 142 FKVLHISDTHYD 153 (287)
Q Consensus 142 ~~vlhiSD~H~D 153 (287)
+||++|||+|-.
T Consensus 1 mri~viSD~Hg~ 12 (182)
T PRK09453 1 MKLMFASDTHGS 12 (182)
T ss_pred CeEEEEEeccCC
Confidence 489999999964
No 69
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=24.52 E-value=28 Score=36.28 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=40.2
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHhhccccccCCCEEEEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCcccc
Q psy14383 184 AGRWGDYRKCDTPKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHF 263 (287)
Q Consensus 184 Ag~~G~y~~CD~P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~ 263 (287)
++..|.. .-..|...++..+..|+++ .=+.|++++|.......... -.++-...+++. .-|-+.+.||+|.
T Consensus 169 ~~~~g~v-~~~d~veaa~~~v~~Lr~~------gaDvII~LsH~G~~~d~~~~-~~en~~~~l~~v-~gID~Il~GHsH~ 239 (626)
T TIGR01390 169 ANLDGKV-TTADIVDTARKYVPEMKAK------GADIIVALAHSGISADPYQP-GAENSAYYLTKV-PGIDAVLFGHSHA 239 (626)
T ss_pred ccccCce-EECCHHHHHHHHHHHHHHc------CCCEEEEEeccCcCCCcccc-ccchHHHHHhcC-CCCCEEEcCCCCc
Confidence 3444544 4445555556555555532 12679999999654321111 122222234444 3388899999998
Q ss_pred c
Q psy14383 264 D 264 (287)
Q Consensus 264 D 264 (287)
-
T Consensus 240 ~ 240 (626)
T TIGR01390 240 V 240 (626)
T ss_pred c
Confidence 4
No 70
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=24.37 E-value=27 Score=32.21 Aligned_cols=36 Identities=17% Similarity=0.100 Sum_probs=24.7
Q ss_pred CCEEEEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCccccc
Q psy14383 218 GEKVHVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFD 264 (287)
Q Consensus 218 ~ekV~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D 264 (287)
=+-|+++.|..... -.++.++. .-|-..+.||+|.-
T Consensus 183 ~D~II~l~H~G~~~----------d~~la~~~-~giD~IiggH~H~~ 218 (281)
T cd07409 183 VNKIIALSHSGYEV----------DKEIARKV-PGVDVIVGGHSHTF 218 (281)
T ss_pred CCEEEEEeccCchh----------HHHHHHcC-CCCcEEEeCCcCcc
Confidence 36789999995421 13556666 33677889999984
No 71
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=22.78 E-value=51 Score=29.64 Aligned_cols=15 Identities=13% Similarity=0.177 Sum_probs=13.3
Q ss_pred CceeEEEeeccCCCC
Q psy14383 140 PTFKVLHISDTHYDP 154 (287)
Q Consensus 140 ~~~~vlhiSD~H~D~ 154 (287)
.+++|+|+||+|+..
T Consensus 3 ~~~~f~~~sD~h~~~ 17 (262)
T cd07395 3 GPFYFIQGADPQLGL 17 (262)
T ss_pred CCEEEEEecCCccch
Confidence 469999999999984
No 72
>PF10652 DUF2480: Protein of unknown function (DUF2480); InterPro: IPR018914 All the members of this family are uncharacterised proteins, but the environment in which they are found on the bacterial genome suggests a function as a glucose-6-phosphate isomerase (5.3.1.9 from EC). This could not, however, be confirmed.
Probab=22.37 E-value=2.4e+02 Score=24.54 Aligned_cols=57 Identities=12% Similarity=0.228 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHhhccccccCCCEEEEe--cccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCcc
Q psy14383 197 KRTVDHMLQHISTTHTSAEFSGEKVHVI--GHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHT 261 (287)
Q Consensus 197 ~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii--~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHt 261 (287)
..|..+.++.+-++..-.+-+|++|+|= ++.| ...+.|..++++-+.++++.+||--
T Consensus 100 e~le~~l~~~~i~~~D~s~~~dk~ViiKGCs~k~--------vP~~AY~~~~~kL~pvakSlMyGEa 158 (167)
T PF10652_consen 100 EDLETSLYQEAINKLDLSEYKDKPVIIKGCSDKP--------VPENAYVEATQKLQPVAKSLMYGEA 158 (167)
T ss_pred HHHHHHHHHHHHHhhCHHHHCCCcEEEECCCCCC--------CCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4566666666666666778889999998 4444 2345599999999999999999953
No 73
>KOG3782|consensus
Probab=22.09 E-value=2.3e+02 Score=24.78 Aligned_cols=57 Identities=30% Similarity=0.341 Sum_probs=36.3
Q ss_pred HHHHHHHhHHHHHHHHHhhccCcccchhhHHHHHHHHHHHHh---------------------------CCChHHHHHHH
Q psy14383 18 DKALRLLNLRQVVEEIETSVMSSMSCTACKAGVGLLQYYIKS---------------------------GRTVADIEKMS 70 (287)
Q Consensus 18 ~~~l~~~~~~~~~~~~~~~~~~~~~C~~C~~~l~~l~~~~~~---------------------------~~~~~~i~~~~ 70 (287)
.++|.+++.--... .......+.|.+|++++.-+..-+.. .++...+.+++
T Consensus 4 ~~~lillg~L~g~~--~a~~S~~~~CgaC~alVtelE~~IA~vDPkK~i~vgsFR~~p~G~q~~~kV~yarSE~hLTEl~ 81 (189)
T KOG3782|consen 4 TKALILLGLLAGAG--YAFTSREVKCGACKALVTELEEAIAKVDPKKMIDVGSFRLDPQGNQISKKVRYARSEMHLTELM 81 (189)
T ss_pred HHHHHHHHHHhhhh--hhhhccccccchHHHHHHHHHHHHHhcCchheeeecceEECCCCCeeeeeeccchhHHHHHHHH
Confidence 34555555433332 22223456899999999888654421 13567788999
Q ss_pred HHhccc
Q psy14383 71 YKFCVT 76 (287)
Q Consensus 71 ~~lC~~ 76 (287)
.++|..
T Consensus 82 E~iCd~ 87 (189)
T KOG3782|consen 82 EKICDK 87 (189)
T ss_pred HHHHHH
Confidence 999998
No 74
>KOG1432|consensus
Probab=21.57 E-value=75 Score=30.97 Aligned_cols=32 Identities=16% Similarity=0.344 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhHhHhhcCccccccEEEEeCC
Q psy14383 240 RNYYSIINRYEATIAAQFFGHTHFDEFELFYDK 272 (287)
Q Consensus 240 ~~~~~iv~ry~~~I~~~f~GHtH~D~f~v~~~~ 272 (287)
..|.+++..- --|.+.|.||.|...|=..+.+
T Consensus 288 sg~~~~L~~r-~~Vk~vf~GHdHvNDfC~~~k~ 319 (379)
T KOG1432|consen 288 SGFLTTLVNR-GNVKGVFCGHDHVNDFCGELKG 319 (379)
T ss_pred cHHHHHHHhc-cCcceEEeccccccceecccCC
Confidence 3456655522 2489999999999998766654
No 75
>PRK10853 putative reductase; Provisional
Probab=21.44 E-value=1.3e+02 Score=24.16 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=23.9
Q ss_pred CcccchhhHHHHHHHHH---------HHHhCCChHHHHHHHH
Q psy14383 39 SSMSCTACKAGVGLLQY---------YIKSGRTVADIEKMSY 71 (287)
Q Consensus 39 ~~~~C~~C~~~l~~l~~---------~~~~~~~~~~i~~~~~ 71 (287)
....|++|+.++..|+. +.+.+.+.+++..++.
T Consensus 6 ~~~~C~t~rkA~~~L~~~~i~~~~~d~~k~p~s~~eL~~~l~ 47 (118)
T PRK10853 6 GIKNCDTIKKARRWLEAQGIDYRFHDYRVDGLDSELLQGFID 47 (118)
T ss_pred cCCCCHHHHHHHHHHHHcCCCcEEeehccCCcCHHHHHHHHH
Confidence 45689999999998864 4445566777777654
No 76
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=21.09 E-value=50 Score=26.93 Aligned_cols=12 Identities=50% Similarity=0.376 Sum_probs=10.5
Q ss_pred eEEEeeccCCCC
Q psy14383 143 KVLHISDTHYDP 154 (287)
Q Consensus 143 ~vlhiSD~H~D~ 154 (287)
||+++||+|...
T Consensus 1 ~i~~isD~H~~~ 12 (155)
T cd00841 1 KIGVISDTHGSL 12 (155)
T ss_pred CEEEEecCCCCH
Confidence 689999999776
No 77
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=21.08 E-value=1.4e+02 Score=23.52 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=22.5
Q ss_pred CcccchhhHHHHHHHHH---------HHHhCCChHHHHHHHH
Q psy14383 39 SSMSCTACKAGVGLLQY---------YIKSGRTVADIEKMSY 71 (287)
Q Consensus 39 ~~~~C~~C~~~l~~l~~---------~~~~~~~~~~i~~~~~ 71 (287)
....|+.|+.+...|+. +.+...+.+++..++.
T Consensus 5 ~~~~C~~crka~~~L~~~~i~~~~~di~~~p~s~~eL~~~l~ 46 (105)
T cd03035 5 GIKNCDTVKKARKWLEARGVAYTFHDYRKDGLDAATLERWLA 46 (105)
T ss_pred eCCCCHHHHHHHHHHHHcCCCeEEEecccCCCCHHHHHHHHH
Confidence 45689999999888865 2334456666666554
No 78
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=20.97 E-value=1.1e+02 Score=24.74 Aligned_cols=34 Identities=21% Similarity=0.552 Sum_probs=23.2
Q ss_pred CcccchhhHHHHHHHHH---------HHHhCCChHHHHHHHHH
Q psy14383 39 SSMSCTACKAGVGLLQY---------YIKSGRTVADIEKMSYK 72 (287)
Q Consensus 39 ~~~~C~~C~~~l~~l~~---------~~~~~~~~~~i~~~~~~ 72 (287)
...+|+.|+.++..|+. +...+.+.+.+.+++..
T Consensus 7 ~~p~C~t~rka~~~L~~~gi~~~~~~y~~~~~s~~eL~~~l~~ 49 (117)
T COG1393 7 GNPNCSTCRKALAWLEEHGIEYTFIDYLKTPPSREELKKILSK 49 (117)
T ss_pred eCCCChHHHHHHHHHHHcCCCcEEEEeecCCCCHHHHHHHHHH
Confidence 45689999999988865 33345566666665443
No 79
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=20.64 E-value=1.1e+02 Score=27.71 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHhhccccccCCCEEEEecccCCCCCchhhhHHHHHHHHHHHHHHhHhHhhcCccccc
Q psy14383 185 GRWGDYRKCDTPKRTVDHMLQHISTTHTSAEFSGEKVHVIGHIPPGHSDCLRVWSRNYYSIINRYEATIAAQFFGHTHFD 264 (287)
Q Consensus 185 g~~G~y~~CD~P~~l~~s~l~~I~~~~~~Ae~~~ekV~Ii~HIPpg~~~~~~~w~~~~~~iv~ry~~~I~~~f~GHtH~D 264 (287)
++.+.+ ....|...++..+..+++ ++.-+-|++++|.+.... .++.+++. -|-..+.||+|.-
T Consensus 157 ~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~D~iI~l~H~g~~~~----------~~la~~~~-~iDlilgGH~H~~ 219 (264)
T cd07411 157 RFTPGL-TFGIREEELQEVVVKLRR-----EEGVDVVVLLSHNGLPVD----------VELAERVP-GIDVILSGHTHER 219 (264)
T ss_pred CCCCCc-EECCHHHHHHHHHHHHHH-----hCCCCEEEEEecCCchhh----------HHHHhcCC-CCcEEEeCccccc
Confidence 333444 455666555555444332 123578999999965311 24455553 3555789999964
Q ss_pred c
Q psy14383 265 E 265 (287)
Q Consensus 265 ~ 265 (287)
.
T Consensus 220 ~ 220 (264)
T cd07411 220 T 220 (264)
T ss_pred c
Confidence 3
No 80
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=20.39 E-value=58 Score=29.84 Aligned_cols=13 Identities=15% Similarity=0.271 Sum_probs=11.1
Q ss_pred eeEEEeeccCCCC
Q psy14383 142 FKVLHISDTHYDP 154 (287)
Q Consensus 142 ~~vlhiSD~H~D~ 154 (287)
+||++|||+|.+.
T Consensus 1 ~rIa~isDiHg~~ 13 (238)
T cd07397 1 LRIAIVGDVHGQW 13 (238)
T ss_pred CEEEEEecCCCCc
Confidence 5899999999754
Done!