BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14385
(228 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8MR62|VIAF1_DROME Viral IAP-associated factor homolog OS=Drosophila melanogaster
GN=viaf PE=1 SV=1
Length = 240
Score = 228 bits (580), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 149/194 (76%), Gaps = 14/194 (7%)
Query: 39 PNYEEDTQWNDILRAKGII-PQ-KEKEVTEDDIVNLVEQTVKEK------QGKGEKELGD 90
PN EDT+WND+LRAKGII P+ KE E+TED I L++ ++ + +G+ +K++ D
Sbjct: 4 PN--EDTEWNDVLRAKGIIGPKAKEAEITEDQIQKLMDDAIQRRTDLPLNEGQRDKKIDD 61
Query: 91 MDLDDLDELEDEEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGI 150
M LD+LDELED EDE VL++YR++RIAEM+A AEK+RFG V EI+G YV EV AGEGI
Sbjct: 62 MSLDELDELEDSEDEAVLEQYRQRRIAEMRATAEKARFGSVREISGQDYVNEVTKAGEGI 121
Query: 151 WVVLHF----IPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGK 206
WVVLH +PLC+LI++H+ +LA +FP TKF++S++TTCIPN+P+KNLPT+FIY EG
Sbjct: 122 WVVLHLYANGVPLCALIHHHMQQLAVRFPQTKFVRSVATTCIPNFPEKNLPTIFIYHEGA 181
Query: 207 MQSQMVGPDEFRTN 220
++ Q +GP E R +
Sbjct: 182 LRKQYIGPLELRGD 195
>sp|Q5RB77|PDCL3_PONAB Phosducin-like protein 3 OS=Pongo abelii GN=PDCL3 PE=2 SV=1
Length = 239
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 128/181 (70%), Gaps = 10/181 (5%)
Query: 44 DTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDELED-- 101
DT+WNDILR KGI+P KE ++ ++ +++ K + DM L++LD+ ED
Sbjct: 7 DTEWNDILRKKGILPPKESLKELEEEAEEEQRILQQSVVKTYE---DMTLEELDDHEDEF 63
Query: 102 -EEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF---- 156
EEDER ++ YRR+R+AE K K++FG VLEI+G YVQEV AGEG+WV+LH
Sbjct: 64 NEEDERAIEMYRRQRLAEWKVTKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQG 123
Query: 157 IPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMVGPDE 216
IPLC+LIN HLS LA KFP KFIK+ISTTCIPNYPD+NLPT+F+Y EG +++Q +GP
Sbjct: 124 IPLCALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIGPLV 183
Query: 217 F 217
F
Sbjct: 184 F 184
>sp|Q4KLJ8|PDCL3_RAT Phosducin-like protein 3 OS=Rattus norvegicus GN=Pdcl3 PE=2 SV=1
Length = 240
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 128/189 (67%), Gaps = 10/189 (5%)
Query: 44 DTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDELEDE- 102
DT+WNDILR KGI+P KE + + Q K DM L++L E EDE
Sbjct: 7 DTEWNDILRKKGILPPKESLKEL--EEEEEGKEEQRLQQSVVKTYEDMTLEELQENEDEF 64
Query: 103 --EDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF---- 156
EDER ++ YR++R+AE KA +++FG VLEI+G YVQEV AGEG+WVVLH
Sbjct: 65 SEEDERAIEMYRQQRLAEWKATQLRNKFGEVLEISGKDYVQEVTKAGEGLWVVLHLYKQG 124
Query: 157 IPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMVGPDE 216
IPLCSLIN+HLS LA KFP KFIK+ISTTCIPNYPD+NLPT+F+Y EG +++Q +GP
Sbjct: 125 IPLCSLINHHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTVFVYREGDIKAQFIGPLV 184
Query: 217 F-RTNLSCD 224
F NL+ D
Sbjct: 185 FGGMNLTID 193
>sp|Q9H2J4|PDCL3_HUMAN Phosducin-like protein 3 OS=Homo sapiens GN=PDCL3 PE=1 SV=1
Length = 239
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
Query: 44 DTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDELEDEE 103
DT+WNDILR KGI+P KE ++ ++ +++ K +++ +L+D ++ +EE
Sbjct: 7 DTEWNDILRKKGILPPKESLKELEEEAEEEQRILQQSVVKTYEDMTLEELEDHEDEFNEE 66
Query: 104 DERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF----IPL 159
DER ++ YRR+R+AE KA K++FG VLEI+G YVQEV AGEG+WV+LH IPL
Sbjct: 67 DERAIEMYRRRRLAEWKATKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQGIPL 126
Query: 160 CSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMVGPDEF 217
C+LIN HLS LA KFP KFIK+ISTTCIPNYPD+NLPT+F+Y EG +++Q +GP F
Sbjct: 127 CALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIGPLVF 184
>sp|Q6P268|PDCL3_DANRE Phosducin-like protein 3 OS=Danio rerio GN=pdcl3 PE=2 SV=1
Length = 239
Score = 180 bits (457), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 133/186 (71%), Gaps = 7/186 (3%)
Query: 44 DTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDELEDEE 103
DT+WNDILR KGI+P KE V E++ L Q+ + K +++ +L++ ++ EE
Sbjct: 7 DTEWNDILRKKGILPPKETPVEEEEDEQLHLQS--QSVVKTYEDMTLEELEENEDEFSEE 64
Query: 104 DERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF----IPL 159
DE ++ YR KR+AE KA K+ FG + EI+G YVQEVN AGEGIWVVLH IPL
Sbjct: 65 DEHAMEMYRLKRLAEWKANQMKNVFGELKEISGQDYVQEVNKAGEGIWVVLHLYKQGIPL 124
Query: 160 CSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMVGPDEF-R 218
CSLIN HL++LA KFP +KF+KSIS+TCIPNYPD+NLPTLF+Y +G+M++Q +GP F
Sbjct: 125 CSLINQHLAQLARKFPQSKFLKSISSTCIPNYPDRNLPTLFVYRDGEMKAQFIGPLVFGG 184
Query: 219 TNLSCD 224
NL+CD
Sbjct: 185 MNLTCD 190
>sp|Q0VCW8|PDCL3_BOVIN Phosducin-like protein 3 OS=Bos taurus GN=PDCL3 PE=2 SV=1
Length = 240
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 134/193 (69%), Gaps = 18/193 (9%)
Query: 44 DTQWNDILRAKGIIPQKEKEVTEDDIVNLV-------EQTVKEKQGKGEKELGDMDLDDL 96
DT+WNDILR KGI+P KE D+ +L ++ +++ K +++ +L+D
Sbjct: 7 DTEWNDILRKKGILPSKE------DLKDLEKEAEEEEQRILQQSIVKTYEDMTLEELEDN 60
Query: 97 DELEDEEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF 156
++ +EEDER ++ YR++R+AE KA K++FG VLEI+G YVQEV AGEG+WV+LH
Sbjct: 61 EDEFNEEDERAIEMYRQQRLAEWKATQLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHL 120
Query: 157 ----IPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMV 212
IPLC+LIN HLS LA KFP KFIK+ISTTCIP+YPD+NLPT+F+Y EG +++Q +
Sbjct: 121 YKQGIPLCALINQHLSALARKFPDVKFIKAISTTCIPSYPDRNLPTVFVYLEGDIKAQFI 180
Query: 213 GPDEF-RTNLSCD 224
GP F NL+ D
Sbjct: 181 GPLVFGGMNLTLD 193
>sp|Q8BVF2|PDCL3_MOUSE Phosducin-like protein 3 OS=Mus musculus GN=Pdcl3 PE=1 SV=1
Length = 240
Score = 170 bits (430), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 132/187 (70%), Gaps = 6/187 (3%)
Query: 44 DTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQG-KGEKELGDMDLDDLDELEDE 102
DT+WNDILR KGI+P KE ++ E+ + ++ K +++ +L++ ++ E
Sbjct: 7 DTEWNDILRKKGILPPKESLKELEEEEAEKEEQLLQQSVVKTYEDMTLEELEENEDEFSE 66
Query: 103 EDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF----IP 158
EDER ++ YR++R+AE KA K++FG VLEI+G YVQEV AGEG+WV+LH IP
Sbjct: 67 EDERAIEMYRQQRLAEWKATQLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLYKQGIP 126
Query: 159 LCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMVGPDEF- 217
LCSLIN+HLS LA KFP KFIK+ISTTCIPNYPD+NLPT+F+Y EG +++Q +GP F
Sbjct: 127 LCSLINHHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTVFVYREGDIKAQFIGPLVFG 186
Query: 218 RTNLSCD 224
NL+ D
Sbjct: 187 GMNLTID 193
>sp|Q8N4E4|PDCL2_HUMAN Phosducin-like protein 2 OS=Homo sapiens GN=PDCL2 PE=1 SV=2
Length = 241
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 121/179 (67%), Gaps = 8/179 (4%)
Query: 39 PNYEEDTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDE 98
PN EDT+WNDILR GI+P KE+ ++D+I +V + KE K +++ L + ++
Sbjct: 4 PN--EDTEWNDILRDFGILPPKEE--SKDEIEEMVLRLQKEAMVKPFEKMTLAQLKEAED 59
Query: 99 LEDEEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF-- 156
DEED + ++ YR+KR+ E KA+ +K +FG + EI+G+ YV EV NA E +WV++H
Sbjct: 60 EFDEEDMQAVETYRKKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEEDVWVIIHLYR 119
Query: 157 --IPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMVG 213
IP+C L+N HLS LA KFP TKF+K+I +CI +Y D LPT+F+Y G+++++ +G
Sbjct: 120 SSIPMCLLVNQHLSLLARKFPETKFVKAIVNSCIQHYHDNCLPTIFVYKNGQIEAKFIG 178
>sp|Q32LN3|PDCL2_BOVIN Phosducin-like protein 2 OS=Bos taurus GN=PDCL2 PE=2 SV=1
Length = 242
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 120/179 (67%), Gaps = 8/179 (4%)
Query: 39 PNYEEDTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDE 98
PN EDT+WN+ILR GI+P KE+ +D+I +V + KE K +++ +L + ++
Sbjct: 4 PN--EDTEWNEILRDFGILPPKEE--PKDEIEEMVLRLQKEAMVKPYEKMTLAELKEAED 59
Query: 99 LEDEEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF-- 156
D+ED + ++ YR KR+ E KA+ +K +FG + EI+G+ YV EV NA + +WV++H
Sbjct: 60 EFDDEDMKAIEIYREKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEKDVWVIIHLYR 119
Query: 157 --IPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMVG 213
IPLC L+N HLS LA KFP TKF+K+I+ +CI +Y D LPT+F+Y G+++ + +G
Sbjct: 120 SSIPLCLLVNQHLSLLARKFPETKFVKAIANSCIEHYHDNCLPTIFVYKNGQIEGKFIG 178
>sp|Q78Y63|PDCL2_MOUSE Phosducin-like protein 2 OS=Mus musculus GN=Pdcl2 PE=1 SV=1
Length = 240
Score = 137 bits (344), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 118/179 (65%), Gaps = 8/179 (4%)
Query: 39 PNYEEDTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDE 98
PN EDT+WN+ILR GI+P KE+ +D+I +V + +E K +++ L + ++
Sbjct: 4 PN--EDTEWNEILRNFGILPPKEE--PKDEIEEMVLRLQQEAMVKPYEKMTLAQLKEAED 59
Query: 99 LEDEEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF-- 156
DEED + ++ YR KR+ E KA+ +K +FG + EI+G+ YV EV NA + +WVV+H
Sbjct: 60 EFDEEDIKAIEIYREKRLQEWKALKKKQKFGELREISGNQYVNEVTNAEKDLWVVIHLYR 119
Query: 157 --IPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMVG 213
+P+C ++N HLS LA KFP TKF+K+I +CI +Y D LPT+F+Y G+++ + +G
Sbjct: 120 SSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCIEHYHDNCLPTIFVYKNGQIEGKFIG 178
>sp|Q71A38|PHLP2_DICDI Phosducin-like protein 2 OS=Dictyostelium discoideum GN=phlp2 PE=2
SV=2
Length = 239
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
Query: 45 TQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKE-LGDMDLDDLDELEDEE 103
T+W DI G + K++TED++ +L+++ + + E L + L DL ++ED+E
Sbjct: 6 TEWEDIQIKYGNMEAPPKQLTEDELFDLIKEAAEMATEAEKNEKLENASLKDLKDMEDDE 65
Query: 104 DERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF----IPL 159
DE VL++ R+KRI +MK AE ++FG + EI+ +Y EV +G+ VV+H IP
Sbjct: 66 DEDVLEQLRKKRIQQMKVEAELNKFGELKEISEPSYKSEVTEC-KGVMVVVHLFKNGIPQ 124
Query: 160 CSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMV 212
C L+N HL+ LA KF TKF+K S I NYPDKNLPT+ +YF G + Q++
Sbjct: 125 CQLVNQHLTILAKKFKATKFVKIRSEEAIHNYPDKNLPTILVYFNGDIVGQII 177
>sp|Q9Y7L1|YGI9_SCHPO Phosducin-like protein C2A9.09 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC2A9.09 PE=1 SV=2
Length = 233
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 105/177 (59%), Gaps = 8/177 (4%)
Query: 40 NYEEDTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDEL 99
N +EDT+WNDILR+KGI+P+KE +V + L + V KQ E L + DLD+L EL
Sbjct: 2 NPDEDTEWNDILRSKGILPEKEPDVDD----VLDDALVDAKQLAHENRLENKDLDELAEL 57
Query: 100 EDEEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF--- 156
EDEED+ LQ YR KR+ E K K++FG V I+ Y EV +A + ++VV+H
Sbjct: 58 EDEEDDEFLQMYRNKRMQEWKDQMSKAKFGSVYPISKPEYTAEVTDASKEVFVVVHMFQD 117
Query: 157 -IPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMV 212
+P C L+ L LA +P KF+K + NYP+ +PTL IY G +Q Q++
Sbjct: 118 SLPACKLLAAILERLAPMYPQIKFVKIPGKQAVENYPEAMMPTLLIYGHGDLQQQIL 174
>sp|Q12017|PLP2_YEAST Phosducin-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PLP2 PE=1 SV=1
Length = 286
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 28/193 (14%)
Query: 43 EDTQWNDILRAKGIIPQKEKEVTEDDIVNLVEQTVKEKQGK-GEKELGDMDLDDLDELED 101
ED++WNDILRAKG+IP++ T +E+ ++E K E L D DL DL+ELED
Sbjct: 15 EDSEWNDILRAKGVIPERAPSPTAK-----LEEALEEAIAKQHENRLEDKDLSDLEELED 69
Query: 102 EEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEV--------------NNAG 147
+EDE L+ Y+ KR+ E++ + E+S+FG V IN Y +EV N+ G
Sbjct: 70 DEDEDFLEAYKIKRLNEIRKLQERSKFGEVFHINKPEYNKEVTLASQGKKYEGAQTNDNG 129
Query: 148 E----GIWVVLHF---IPLCSLINNHLSELAA-KFPTTKFIKSISTTCIPNYPDKNLPTL 199
E G++V +H L S I +HL + AA KF KF++ + I NYP+ N PTL
Sbjct: 130 EEDDGGVYVFVHLSLQSKLQSRILSHLFQSAACKFREIKFVEIPANRAIENYPESNCPTL 189
Query: 200 FIYFEGKMQSQMV 212
+Y+ G++ M+
Sbjct: 190 IVYYRGEVIKNMI 202
>sp|Q71A39|PHLP1_DICDI Phosducin-like protein 1 OS=Dictyostelium discoideum GN=phlp1 PE=2
SV=1
Length = 316
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 91 MDLDDLDELEDEEDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQEVNNAGEGI 150
+D DD D+LE R+ Q +++I EK FG +I+ Y+ E++N +
Sbjct: 139 LDSDD-DDLERIRKARMEQWKSKQQITSDVKKPEKKVFGYFKQIDSSQYIHEIDNEPPNV 197
Query: 151 WVVLH----FIPLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDKNLPTLFIYFEGK 206
+V++H +IP C L+N L +LA K+ KF+K +S NY D+ LP+L +Y GK
Sbjct: 198 FVIIHLFQNYIPECVLLNQQLGQLAVKYRYIKFLKILSKEAKENYHDEALPSLLVYIGGK 257
Query: 207 M 207
+
Sbjct: 258 L 258
>sp|Q13371|PHLP_HUMAN Phosducin-like protein OS=Homo sapiens GN=PDCL PE=1 SV=3
Length = 301
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 100 EDEEDERVLQEYRRKRIAEMKAMAEKS-RFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF- 156
ED++DE LQ+YR++R+ EM+ K +F +V EI +G+ ++ ++ + I +++H
Sbjct: 129 EDQDDEEFLQQYRKQRMEEMRQQLHKGPQFKQVFEISSGEGFLDMIDKEQKSIVIMVHIY 188
Query: 157 ---IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQM 211
IP +N + LAA++P KF +KS + LP L IY G++
Sbjct: 189 EDGIPGTEAMNGCMICLAAEYPAVKFCKVKSSVIGASSQFTRNALPALLIYKGGELIGNF 248
Query: 212 V------GPDEFRTNL 221
V G D F +L
Sbjct: 249 VRVTDQLGDDFFAVDL 264
>sp|Q2HJA9|PHLP_BOVIN Phosducin-like protein OS=Bos taurus GN=PDCL PE=2 SV=1
Length = 301
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 85 EKELGDMDLDDLDEL-EDEEDERVLQEYRRKRIAEMK-AMAEKSRFGRVLEI-NGDTYVQ 141
EK G M L DL + ED++DE LQ+YR++R+ EM+ + + +F +V EI +G+ ++
Sbjct: 113 EKISGKMTLKDLAVMNEDQDDEEFLQQYRKQRMEEMRQQLYQGPQFKQVFEIPSGEGFLD 172
Query: 142 EVNNAGEGIWVVLHF----IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKN 195
++ +++H IP +N + LAA++P KF ++S +
Sbjct: 173 MIDKEQRSTLIMVHIYEDGIPGTEAMNGCMLCLAAEYPAVKFCRVRSSVIGASSRFTRNA 232
Query: 196 LPTLFIYFEGKMQSQMV------GPDEFRTNL 221
LP L IY G++ V G D F +L
Sbjct: 233 LPALLIYKGGELIGNFVRVTDQLGEDFFAVDL 264
>sp|Q9XS39|PHOS_HORSE Phosducin OS=Equus caballus GN=PDC PE=2 SV=1
Length = 245
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 68/121 (56%), Gaps = 8/121 (6%)
Query: 100 EDEEDERVLQEYRRKRIAEM-KAMAEKSRFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF- 156
+D+EDE L++YRR+ + +M + ++ R+G V E+ G+ +++ + + +V+H
Sbjct: 82 QDKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKITTIVVHIY 141
Query: 157 ---IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQM 211
I C +N+ L+ LAA++P KF IK+ +T + LPTL +Y G++ S
Sbjct: 142 EDGIKGCDALNSSLACLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELISNF 201
Query: 212 V 212
+
Sbjct: 202 L 202
>sp|P19632|PHOS_BOVIN Phosducin OS=Bos taurus GN=PDC PE=1 SV=2
Length = 245
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 101 DEEDERVLQEYRRKRIAEM-KAMAEKSRFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF-- 156
D+EDE L++YRR+ + +M + ++ R+G V E+ +G+ +++ + + +V+H
Sbjct: 83 DKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYE 142
Query: 157 --IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMV 212
I C +N+ L LAA++P KF IK+ +T + LPTL +Y G++ S +
Sbjct: 143 DGIKGCDALNSSLICLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELLSNFI 202
Query: 213 GPDE 216
E
Sbjct: 203 SVTE 206
>sp|Q63737|PHLP_RAT Phosducin-like protein OS=Rattus norvegicus GN=Pdcl PE=1 SV=1
Length = 301
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 21/150 (14%)
Query: 86 KELGDMDLDDLDELEDEEDERVLQEYRRKRIAEMKAMAEKS-RFGRVLEI-NGDTYVQEV 143
KE G MD +LD DE LQ+YR++R+ EM+ K +F +VLEI +G+ ++ +
Sbjct: 122 KECGMMD-KNLD------DEEFLQQYRKQRMDEMRQQLHKGPQFKQVLEIPSGEGFLDMI 174
Query: 144 NNAGEGIWVVLHF----IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLP 197
+ + +++H +P +N + LAA++PT KF ++S + LP
Sbjct: 175 DKEQKSTLIMVHIYEDGVPGTEAMNGCMICLAAEYPTVKFCRVRSSVIGASSRFTRNALP 234
Query: 198 TLFIYFEGKMQSQMV------GPDEFRTNL 221
L IY G++ V G D F +L
Sbjct: 235 ALLIYKAGELIGNFVRVTDQLGEDFFAVDL 264
>sp|O77560|PHOS_CANFA Phosducin OS=Canis familiaris GN=PDC PE=1 SV=2
Length = 245
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 101 DEEDERVLQEYRRKRIAEM-KAMAEKSRFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF-- 156
D+EDE L++YRR+ + +M + ++ R+G V E+ G+ +++ + + +V+H
Sbjct: 83 DKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKITTIVVHIYE 142
Query: 157 --IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMV 212
+ C +N+ + LAA++P KF IK+ +T + LPTL IY G++ S +
Sbjct: 143 DGVKGCDALNSSFTCLAAEYPMVKFCKIKASNTGAGDRFSSDVLPTLLIYKGGELISNFI 202
Query: 213 GPDE 216
E
Sbjct: 203 SVTE 206
>sp|P41686|PHOS_FELCA Phosducin OS=Felis catus GN=PDC PE=2 SV=1
Length = 245
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 101 DEEDERVLQEYRRKRIAEM-KAMAEKSRFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF-- 156
D+EDE L++YRR+ + +M + ++ R+G V E+ G+ +++ + + +V+H
Sbjct: 83 DKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKITTIVVHIYE 142
Query: 157 --IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMV 212
I C +N+ + LA ++P KF IK+ +T + LPTL +Y G++ S +
Sbjct: 143 DGIKGCDALNSSFTCLAVEYPMVKFCKIKASNTGARDRFSSDVLPTLLVYKGGELISNFI 202
Query: 213 GPDE 216
E
Sbjct: 203 SVSE 206
>sp|P20941|PHOS_HUMAN Phosducin OS=Homo sapiens GN=PDC PE=1 SV=1
Length = 246
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 101 DEEDERVLQEYRRKRIAEM-KAMAEKSRFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF-- 156
++EDE L++YRR+ + +M + ++ R+G V E+ G +++ + + +V+H
Sbjct: 83 EKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGKQFLETIEKELKITTIVVHIYE 142
Query: 157 --IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMV 212
I C +N+ L+ LAA++P KF IK+ +T + LPTL IY G++ S +
Sbjct: 143 DGIKGCDALNSSLTCLAAEYPIVKFCKIKASNTGAGDRFSLDVLPTLLIYKGGELISNFI 202
>sp|Q9VUR7|PHLP_DROME Phosducin-like protein OS=Drosophila melanogaster GN=CG7650 PE=1
SV=2
Length = 276
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 95 DLDELEDEEDERVLQEYRRKRIAEM-KAMAEKSRFGRVLEING-DTYVQEVNNAGEGIWV 152
+LDEL E+ LQ+Y+++R+AEM + +FG+V ++ + ++ V + +
Sbjct: 122 ELDELMSED---FLQQYQKQRMAEMLRQTGHHQQFGQVQQLTSHEEFLACVEQENKHTTI 178
Query: 153 VLHF----IPLCSLINNHLSELAAKFPTTKFIKSISTTC--IPNYPDKNLPTLFIY 202
++H + C+ +N L LA+ +P+ KF K S+ ++ K LP L +Y
Sbjct: 179 IIHIYERQLAACATLNKCLDSLASDYPSIKFAKICSSVAGMSRDFRTKGLPALLVY 234
>sp|P20942|PHOS_RAT Phosducin OS=Rattus norvegicus GN=Pdc PE=1 SV=1
Length = 246
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 100 EDEEDERVLQEYRRKRIAEM-KAMAEKSRFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF- 156
+D+EDE L++YRR+ + +M + ++ R+G V E+ G+ +++ + + +V++
Sbjct: 82 QDKEDEGCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIY 141
Query: 157 ---IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQM 211
+ C +N+ L LAA++P KF I++ +T + LPTL +Y G++ S
Sbjct: 142 EDGVRGCDALNSSLECLAAEYPMVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGELISNF 201
Query: 212 V 212
+
Sbjct: 202 I 202
>sp|Q9QW08|PHOS_MOUSE Phosducin OS=Mus musculus GN=Pdc PE=2 SV=1
Length = 244
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 100 EDEEDERVLQEYRRKRIAEM-KAMAEKSRFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF- 156
+D+EDE L++YRR+ + +M + ++ R+G V E+ G+ +++ + + +V++
Sbjct: 80 QDKEDESCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIY 139
Query: 157 ---IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQM 211
+ C +N+ L+ LA ++P KF IK+ +T + LPTL +Y G++ S
Sbjct: 140 EDGVRGCDALNSSLACLAVEYPMVKFCKIKASNTGAGDRFSTDVLPTLLVYKGGELISNF 199
Query: 212 V 212
+
Sbjct: 200 I 200
>sp|Q9DBX2|PHLP_MOUSE Phosducin-like protein OS=Mus musculus GN=Pdcl PE=1 SV=1
Length = 301
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 14/133 (10%)
Query: 103 EDERVLQEYRRKRIAEMKAMAEKS-RFGRVLEI-NGDTYVQEVNNAGEGIWVVLHF---- 156
+DE LQ+YR++R+ EM+ K +F +V EI +G+ ++ ++ + +++H
Sbjct: 132 DDEEFLQQYRKQRMEEMRQQFHKGPQFKQVFEIPSGEGFLDMIDKEQKSTLIMVHIYEDG 191
Query: 157 IPLCSLINNHLSELAAKFPTTKF--IKSISTTCIPNYPDKNLPTLFIYFEGKMQSQMV-- 212
+P +N + LA ++P KF ++S + LP L IY G++ V
Sbjct: 192 VPGTEAMNGCMICLATEYPAVKFCRVRSSVIGASSRFTRNALPALLIYKAGELIGNFVRV 251
Query: 213 ----GPDEFRTNL 221
G D F +L
Sbjct: 252 TDQLGEDFFAVDL 264
>sp|Q04004|PLP1_YEAST Phosducin-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PLP1 PE=1 SV=1
Length = 230
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 85 EKELGDMDLDDL-DELEDE--EDERVLQEYRRKRIAEMKAMAEKSRFGRVLEINGDTYVQ 141
+K G+ +LD+L +EL+ E ED L YR +R+ ++ ++ + + +E +G +Q
Sbjct: 28 DKSSGEENLDELLNELDRELDEDHEFLSAYRSERLQQISDHLKQVK--KNVEDDGYGRLQ 85
Query: 142 EVNNAGEGI-------WVVLHF----IPLCSLINNHLSELAAKFPTTKFIKSISTTC--- 187
++N + I VV+HF C +N L LA ++ TT+FIK TC
Sbjct: 86 CIDNEADAIQICTKTTMVVIHFELETFGKCQYMNEKLENLAKRYLTTRFIKVNVQTCPFL 145
Query: 188 IPNYPDKNLPTLFIYFEGKMQSQMVG 213
+ K LP + Y G + + VG
Sbjct: 146 VNKLNIKVLPFVVGYKNGLEKVRYVG 171
>sp|O64628|TXND9_ARATH Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis
thaliana GN=At2g18990 PE=2 SV=1
Length = 211
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 94 DDLDELE--DEEDERVLQEYRRKRIAEMKAMAEKSR------FGRVLEINGDTYVQEVNN 145
D++ LE DE+D VL+E +R+ +MK MAEK + G EI+ + V
Sbjct: 26 DEIASLEKLDEDDLEVLRE---RRLKQMKKMAEKKKRWISLGHGEYSEIHSEKDFFSVVK 82
Query: 146 AGEGIWVVLHFI----PLCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPDK----NLP 197
A E VV HF P C +++ H+S LA + T+F+K I P ++ LP
Sbjct: 83 ASER--VVCHFYRENWP-CKVMDKHMSILAKQHIETRFVK-IQAEKSPFLAERLKIVVLP 138
Query: 198 TLFIYFEGKMQSQMVGPDEF 217
TL + K+ +VG +E
Sbjct: 139 TLALIKNTKVDDYVVGFNEL 158
>sp|Q9CQ79|TXND9_MOUSE Thioredoxin domain-containing protein 9 OS=Mus musculus GN=Txndc9
PE=1 SV=1
Length = 226
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 23/139 (16%)
Query: 90 DMDLDDLDELEDEEDERVLQEYRRKRIAEM-KAMAEKSRF-----GRVLEINGDT-YVQE 142
D ++ LD++ ++E L+ + KR+A + KA +K + G EI + + QE
Sbjct: 30 DSEIQKLDQIGEDE----LELLKEKRLAALRKAQQQKQEWLSKGHGEYREIGSERDFFQE 85
Query: 143 VNNAGEGIWVVLHFIP----LCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPD----K 194
V + + VV HF C +++ HL+ LA K TKF+K ++ P + K
Sbjct: 86 VKESEK---VVCHFYRDTTFRCKILDRHLAILAKKHLETKFLK-LNVEKAPFLCERLRIK 141
Query: 195 NLPTLFIYFEGKMQSQMVG 213
+PTL + +GK Q +VG
Sbjct: 142 VIPTLALLRDGKTQDYVVG 160
>sp|Q8K581|TXND9_RAT Thioredoxin domain-containing protein 9 OS=Rattus norvegicus
GN=Txndc9 PE=2 SV=2
Length = 226
Score = 37.7 bits (86), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 21/138 (15%)
Query: 90 DMDLDDLDELEDEEDERVLQEYRRKRIAEM-KAMAEKSRF-----GRVLEINGDT-YVQE 142
D ++ LD++ ++E L+ + KR+A + KA +K + G EI + + QE
Sbjct: 30 DSEIQKLDQIGEDE----LELLKEKRLAALRKAQQQKQEWLSKGHGEYREIGSERDFFQE 85
Query: 143 VNNAGEGIWVVLHFIP----LCSLINNHLSELAAKFPTTKFIK---SISTTCIPNYPDKN 195
V + + VV HF C +++ HL+ LA K TKF+K + K
Sbjct: 86 VKESEK---VVCHFYRDTTFRCKILDRHLAILAKKHLETKFLKPNVEKAPFLCERLRIKV 142
Query: 196 LPTLFIYFEGKMQSQMVG 213
+PTL + +GK Q +VG
Sbjct: 143 IPTLALLRDGKTQDYIVG 160
>sp|O14096|TGTL_SCHPO Queuine tRNA-ribosyltransferase-like protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC2F3.13c PE=3 SV=4
Length = 649
Score = 37.7 bits (86), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 65 TEDDIVNLVEQTVKEKQG-KGEKELGDMDLDDLDELEDEEDERVLQEYRRKRIAEMKAMA 123
+ D V+L T + + + EL D LDE +D E +K A ++A
Sbjct: 441 SNDPTVDLYADTYATQAATESDSELEDALFSQLDEFDDTAYREQRLEMLKKEFARVEAAK 500
Query: 124 EKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHF----IPLCSLINNHLSELAAKFPTTKF 179
EK + L + + V + + + VV+HF C +I++HL ++A TKF
Sbjct: 501 EKGHM-QFLTVENEREVMDFTLSSKK--VVIHFYHPDFIRCKIIDSHLEKIAKVHWETKF 557
Query: 180 IK---SISTTCIPNYPDKNLPTLFIYFEGKMQSQMVG------PDEFRTNL 221
I+ + + + K LP + Y ++ +++G D+F T+L
Sbjct: 558 IRIEAANAPFLVVKLGLKVLPAVLCYVNSQLVDKIIGFADLGNKDDFETSL 608
>sp|O14530|TXND9_HUMAN Thioredoxin domain-containing protein 9 OS=Homo sapiens GN=TXNDC9
PE=1 SV=2
Length = 226
Score = 37.4 bits (85), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 23/139 (16%)
Query: 90 DMDLDDLDELEDEEDERVLQEYRRKRIAEM-KAMAEKSRF-----GRVLEINGDT-YVQE 142
D ++ LD+++++E ER+ + KR+ + KA +K + G EI + + QE
Sbjct: 30 DSEIQKLDQMDEDELERL----KEKRLQALRKAQQQKQEWLSKGHGEYREIPSERDFFQE 85
Query: 143 VNNAGEGIWVVLHFIP----LCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPD----K 194
V + VV HF C +++ HL+ L+ K TKF+K ++ P + K
Sbjct: 86 VKESEN---VVCHFYRDSTFRCKILDRHLAILSKKHLETKFLK-LNVEKAPFLCERLHIK 141
Query: 195 NLPTLFIYFEGKMQSQMVG 213
+PTL + +GK Q +VG
Sbjct: 142 VIPTLALLKDGKTQDYVVG 160
>sp|O14095|PLP1_SCHPO Thioredoxin domain-containing protein plp1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=plp1 PE=1 SV=2
Length = 279
Score = 37.4 bits (85), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 65 TEDDIVNLVEQTVKEKQG-KGEKELGDMDLDDLDELEDEEDERVLQEYRRKRIAEMKAMA 123
+ D V+L T + + + EL D LDE +D E +K A ++A
Sbjct: 71 SNDPTVDLYADTYATQAATESDSELEDALFSQLDEFDDTAYREQRLEMLKKEFARVEAAK 130
Query: 124 EKSRFGRVLEINGDTYVQEVNNAGEGIWVVLHFIP----LCSLINNHLSELAAKFPTTKF 179
EK + L + + V + + + VV+HF C +I++HL ++A TKF
Sbjct: 131 EKGHM-QFLTVENEREVMDFTLSSKK--VVIHFYHPDFIRCKIIDSHLEKIAKVHWETKF 187
Query: 180 IK---SISTTCIPNYPDKNLPTLFIYFEGKMQSQMVG------PDEFRTNL 221
I+ + + + K LP + Y ++ +++G D+F T+L
Sbjct: 188 IRIEAANAPFLVVKLGLKVLPAVLCYVNSQLVDKIIGFADLGNKDDFETSL 238
>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2
Length = 5560
Score = 35.4 bits (80), Expect = 0.30, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 59 QKEKEVTEDDIVNLVEQTVKEKQGKGEKELGDMDLDDLDELEDEEDERVLQEYRRKRIAE 118
QKEKE+ E D L E+ +E+ + EKEL D DL + + E E+ E+ L + +R E
Sbjct: 2000 QKEKEIREKD---LREKEQRERDNR-EKELRDKDLREKEMREKEQREKELHREKDQRERE 2055
Query: 119 MKAMAEKSRFGRVLEING 136
+ E+SR +E G
Sbjct: 2056 HRE-KEQSRRAMDVEQEG 2072
>sp|O18883|TXND9_BOVIN Thioredoxin domain-containing protein 9 OS=Bos taurus GN=TXNDC9
PE=2 SV=2
Length = 226
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 23/139 (16%)
Query: 90 DMDLDDLDELEDEEDERVLQEYRRKRIAEMKAMAEKSR------FGRVLEINGDT-YVQE 142
D ++ LD+++++E ER+ + KR+ +K ++ + G EI + + QE
Sbjct: 30 DSEIQKLDQMDEDELERL----KEKRLEALKKAQQQKQEWLSKGHGEYREIPSERDFFQE 85
Query: 143 VNNAGEGIWVVLHFIP----LCSLINNHLSELAAKFPTTKFIKSISTTCIPNYPD----K 194
+ + VV HF C +++ HL L+ K TKF+K ++ P + K
Sbjct: 86 DKESKK---VVCHFYRDSTFRCKILDRHLVILSKKHLETKFLK-LNVEKAPFLCERLRIK 141
Query: 195 NLPTLFIYFEGKMQSQMVG 213
+PTL + +GK Q +VG
Sbjct: 142 VIPTLALVKDGKTQDFVVG 160
>sp|Q11183|TXND9_CAEEL Thioredoxin domain-containing protein 9 homolog OS=Caenorhabditis
elegans GN=tag-170 PE=4 SV=1
Length = 208
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 90 DMDLDDLDELEDEEDERVLQEYRRKRIAEMKAMAEKSRF-------GRVLEINGDTYVQE 142
D +++ L+ LE+++ L+ RR+R+ +MK A+K R G+ E+ + E
Sbjct: 25 DQEMNKLENLEEDD----LEVIRRQRMEQMKK-AQKDRIEMLSHGHGKYEEVADEKEFFE 79
Query: 143 VNNAGEGIWVVLHFIP---LCSLINNHLSELAAKFPTTKFI 180
+ + V L ++P C +++ H LA K T+FI
Sbjct: 80 ATKKSDKV-VCLFYLPGNFRCKIVDKHFEILARKHVGTRFI 119
>sp|Q810L3|CHFR_MOUSE E3 ubiquitin-protein ligase CHFR OS=Mus musculus GN=Chfr PE=1 SV=1
Length = 664
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 63 EVTEDDIVNLVEQTVKEKQGKGEK--ELGDMDLDDLDELEDEEDERVLQEYRRKRIAEMK 120
++T+D + V ++ +++G E EL D+D + D + R EYRR+ + +
Sbjct: 383 KITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYIVCRQCPEYRRQAVQSLP 442
Query: 121 AMAEKSRFGRVLEINGDT 138
+S G L + G+
Sbjct: 443 CPVPESELGATLALGGEA 460
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,439,572
Number of Sequences: 539616
Number of extensions: 3964558
Number of successful extensions: 18371
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 353
Number of HSP's that attempted gapping in prelim test: 17368
Number of HSP's gapped (non-prelim): 1099
length of query: 228
length of database: 191,569,459
effective HSP length: 113
effective length of query: 115
effective length of database: 130,592,851
effective search space: 15018177865
effective search space used: 15018177865
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)