BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14390
(64 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27443|MAOM_ASCSU NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris
suum PE=1 SV=1
Length = 643
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGRVEV 31
MQ EG + +EA +RI++MDIDGL+ K R E+
Sbjct: 381 MQNEGISKEEACNRIYLMDIDGLVTKNRKEM 411
>sp|P40927|MAOX_COLLI NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1
Length = 557
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGRVEV 31
MQ EG + +EA RIWM+D GL+ KGR +
Sbjct: 306 MQKEGVSKEEAIKRIWMVDSKGLIVKGRASL 336
>sp|Q99KE1|MAOM_MOUSE NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2
PE=2 SV=1
Length = 589
Score = 35.8 bits (81), Expect = 0.071, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGRVEVVRGNGKYYS 40
M G + +EA+ +IWM D GLL KGR + N + Y+
Sbjct: 327 MVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYA 366
>sp|P13697|MAOX_RAT NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2
Length = 572
Score = 35.8 bits (81), Expect = 0.091, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGRVEV 31
M+ EG + ++AR +IW++D GL+ KGR +
Sbjct: 317 MEKEGLSKEKARQKIWLVDSKGLIVKGRASL 347
>sp|P06801|MAOX_MOUSE NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=2
Length = 572
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGRVEV 31
M+ EG + + AR +IW++D GL+ KGR +
Sbjct: 317 MEKEGLSKENARKKIWLVDSKGLIVKGRASL 347
>sp|P28227|MAOX_ANAPL NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1
Length = 557
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGRVEV 31
M+ EG + + A RIWM+D GL+ KGR +
Sbjct: 306 MEKEGVSKEAAVKRIWMVDSKGLIVKGRASL 336
>sp|P23368|MAOM_HUMAN NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2
PE=1 SV=1
Length = 584
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGR 28
M G + QEA+ +IWM D GLL KGR
Sbjct: 327 MVENGLSEQEAQKKIWMFDKYGLLVKGR 354
>sp|P37222|MAOC_SOLLC NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum
lycopersicum PE=2 SV=1
Length = 573
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 5 GSTVQEARDRIWMMDIDGLLAKGRVEVVR 33
G ++E R +IWM+D GL+ K R+E+++
Sbjct: 342 GIPLEETRKKIWMVDSKGLIVKSRMEMLQ 370
>sp|P59115|PHL1_LEPIN Sphingomyelinase C 1 OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=sph1
PE=3 SV=1
Length = 597
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 23 LLAKGRVEVVRGNGKYYSLIQELNLNRPAYLA 54
+L G + +++G+ +Y+ +I +LN+N P Y+
Sbjct: 305 VLITGDLNIIKGSNEYFDMISKLNVNEPRYVG 336
>sp|Q72P44|PHL1_LEPIC Sphingomyelinase C 1 OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=sph1 PE=3 SV=1
Length = 596
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 23 LLAKGRVEVVRGNGKYYSLIQELNLNRPAYLA 54
+L G + +++G+ +Y+ +I +LN+N P Y+
Sbjct: 304 VLITGDLNIIKGSNEYFDMISKLNVNEPRYVG 335
>sp|Q16798|MAON_HUMAN NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3
PE=2 SV=2
Length = 604
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGR 28
++ EG EA +IWM+D GL+ KGR
Sbjct: 352 LEKEGVPKAEATRKIWMVDSKGLIVKGR 379
>sp|Q8BMF3|MAON_MOUSE NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3
PE=1 SV=2
Length = 604
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGR 28
++ EG EA +IWM+D GL+ KGR
Sbjct: 352 LEKEGIPKTEAIKKIWMVDSKGLIVKGR 379
>sp|Q29558|MAOX_PIG NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2
SV=1
Length = 557
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGR 28
M+ EG ++A +IW++D GL+ KGR
Sbjct: 303 MEKEGVPKEKAIKKIWLVDSKGLIVKGR 330
>sp|P48163|MAOX_HUMAN NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1
Length = 572
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKGRVEVVRGNGKY 38
++ EG ++A +IW++D GL+ KGR + + K+
Sbjct: 317 LEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKF 354
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Query: 7 TVQEARDRIWMMDIDGLLAKGRVEVV 32
+VQ ARD W+ D++GL A GRV V+
Sbjct: 1013 SVQRARD--WLQDVEGLQAGGRVPVL 1036
>sp|P59116|PHL2_LEPIN Sphingomyelinase C 2 OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=sph2
PE=3 SV=1
Length = 623
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 23 LLAKGRVEVVRGNGKYYSLIQELNLNRPAYLA 54
+L G + V++ + +YY +I LN+N P Y+
Sbjct: 336 VLIVGDLNVIKESNEYYDMISRLNVNEPRYVG 367
>sp|A1SSC6|MAO1_PSYIN NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37)
GN=maeA PE=3 SV=1
Length = 560
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLL 24
MQ EG T ++AR R++M+D GLL
Sbjct: 314 MQREGLTQEQARQRVFMVDRYGLL 337
>sp|Q87Y79|MAO1_PSESM NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=maeA PE=3 SV=2
Length = 563
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKG 27
M+ EG + EAR RI+M+D GLL +G
Sbjct: 315 MRIEGLSESEARKRIFMVDRFGLLTEG 341
>sp|Q48LC8|MAO1_PSE14 NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=maeA PE=3 SV=2
Length = 563
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 1 MQTEGSTVQEARDRIWMMDIDGLLAKG 27
M+ EG + EAR RI+M+D GLL +G
Sbjct: 315 MRIEGLSESEARKRIFMVDRFGLLTEG 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,340,082
Number of Sequences: 539616
Number of extensions: 710878
Number of successful extensions: 1555
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1537
Number of HSP's gapped (non-prelim): 19
length of query: 64
length of database: 191,569,459
effective HSP length: 36
effective length of query: 28
effective length of database: 172,143,283
effective search space: 4820011924
effective search space used: 4820011924
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)