RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14393
         (114 letters)



>g1q7l.1 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 280

 Score = 65.1 bits (158), Expect = 2e-14
 Identities = 27/64 (42%), Positives = 37/64 (57%)

Query: 3   DEEIGGSQGMSLFVTTDAFKKMNVGCALDEGIASPTEVFALFNGERTIWQMKIHCPGTPG 62
           DEE+GG QGM LFV    F  +  G ALDEGIA+PT+ F +F  ER+ W ++++      
Sbjct: 140 DEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTVFYSERSPWWVRVNPWWAAF 199

Query: 63  HGSL 66
               
Sbjct: 200 SRVC 203


>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
           PAC) {Streptococcus mutans [TaxId: 1309]}
          Length = 377

 Score = 25.0 bits (54), Expect = 2.5
 Identities = 6/21 (28%), Positives = 8/21 (38%)

Query: 63  HGSLLHENTAAEKVNYIMNKF 83
             SL  E+ + E       KF
Sbjct: 232 VASLNREHNSIEMAKDYSGKF 252


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.133    0.383 

Gapped
Lambda     K      H
   0.267   0.0524    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 410,181
Number of extensions: 16439
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 2
Length of query: 114
Length of database: 2,407,596
Length adjustment: 72
Effective length of query: 42
Effective length of database: 1,419,036
Effective search space: 59599512
Effective search space used: 59599512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.4 bits)