Query psy14395
Match_columns 471
No_of_seqs 299 out of 1611
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 18:45:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14395.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14395hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1581|consensus 100.0 2.4E-66 5.1E-71 503.8 27.1 318 104-467 7-326 (327)
2 KOG1580|consensus 100.0 3.1E-60 6.6E-65 445.2 15.2 322 103-468 5-327 (337)
3 PF08449 UAA: UAA transporter 100.0 1E-48 2.2E-53 394.6 29.7 297 113-460 2-303 (303)
4 KOG1582|consensus 100.0 3.1E-48 6.7E-53 370.7 18.8 301 101-457 33-335 (367)
5 KOG1583|consensus 100.0 1.9E-32 4.2E-37 263.3 9.5 292 111-458 3-318 (330)
6 PTZ00343 triose or hexose phos 100.0 1.7E-28 3.7E-33 252.4 32.0 288 107-456 45-350 (350)
7 TIGR00817 tpt Tpt phosphate/ph 100.0 1.2E-27 2.7E-32 240.6 28.8 287 111-459 2-298 (302)
8 KOG1441|consensus 100.0 4.3E-29 9.3E-34 250.7 11.3 296 105-462 11-315 (316)
9 KOG1443|consensus 99.9 1.6E-22 3.6E-27 197.5 19.1 287 106-454 11-315 (349)
10 PF06027 DUF914: Eukaryotic pr 99.9 1.7E-21 3.8E-26 197.9 26.6 233 178-458 75-309 (334)
11 KOG1444|consensus 99.9 1.1E-19 2.4E-24 179.8 23.8 281 123-464 24-310 (314)
12 PLN00411 nodulin MtN21 family 99.8 5.9E-18 1.3E-22 174.6 32.5 295 108-459 10-333 (358)
13 TIGR00950 2A78 Carboxylate/Ami 99.8 1.4E-16 3.1E-21 155.9 27.5 192 243-449 67-259 (260)
14 TIGR00803 nst UDP-galactose tr 99.8 2.5E-18 5.5E-23 165.7 13.4 201 247-452 2-222 (222)
15 PRK11689 aromatic amino acid e 99.8 9.4E-16 2E-20 154.2 30.8 193 252-456 94-289 (295)
16 PRK11453 O-acetylserine/cystei 99.8 1.7E-15 3.6E-20 152.6 30.9 203 248-457 85-290 (299)
17 KOG1442|consensus 99.8 3.5E-19 7.7E-24 171.8 3.9 278 144-461 54-334 (347)
18 PRK11272 putative DMT superfam 99.7 4.7E-15 1E-19 148.9 31.9 250 150-457 35-288 (292)
19 PRK15430 putative chlorampheni 99.7 8.4E-15 1.8E-19 147.4 30.6 199 241-459 91-290 (296)
20 COG5070 VRG4 Nucleotide-sugar 99.7 2.6E-16 5.7E-21 148.1 16.7 293 110-462 10-304 (309)
21 PRK10532 threonine and homoser 99.7 2E-14 4.3E-19 144.4 30.9 243 151-456 40-283 (293)
22 PF04142 Nuc_sug_transp: Nucle 99.7 9E-15 2E-19 143.5 21.9 218 182-445 17-244 (244)
23 PF03151 TPT: Triose-phosphate 99.6 4.5E-15 9.8E-20 134.0 15.6 141 314-454 1-153 (153)
24 KOG2234|consensus 99.6 1.8E-13 3.8E-18 137.8 26.9 231 183-459 93-327 (345)
25 TIGR03340 phn_DUF6 phosphonate 99.6 5.4E-13 1.2E-17 133.1 24.0 190 246-451 86-280 (281)
26 COG0697 RhaT Permeases of the 99.6 7.1E-12 1.5E-16 123.2 31.6 195 244-455 91-288 (292)
27 KOG3912|consensus 99.5 9.8E-12 2.1E-16 121.0 21.9 228 184-454 88-334 (372)
28 KOG2765|consensus 99.4 6.4E-13 1.4E-17 133.8 12.3 223 236-461 172-397 (416)
29 TIGR00776 RhaT RhaT L-rhamnose 99.3 8.4E-10 1.8E-14 111.0 26.9 179 260-455 97-289 (290)
30 KOG2766|consensus 99.3 2.6E-13 5.5E-18 130.4 0.1 276 106-454 22-299 (336)
31 TIGR00688 rarD rarD protein. T 99.3 1.6E-09 3.4E-14 106.5 25.2 216 151-429 29-255 (256)
32 KOG4510|consensus 99.1 1E-10 2.2E-15 113.3 6.6 211 239-458 113-329 (346)
33 COG5006 rhtA Threonine/homoser 99.1 3.6E-08 7.8E-13 95.3 22.3 241 153-455 42-283 (292)
34 COG2962 RarD Predicted permeas 99.1 5.8E-07 1.3E-11 88.9 30.4 184 259-463 108-292 (293)
35 PF00892 EamA: EamA-like trans 98.7 1.1E-07 2.4E-12 81.7 11.4 123 324-453 2-125 (126)
36 COG2510 Predicted membrane pro 98.6 1.9E-07 4.2E-12 81.6 9.6 132 315-451 5-136 (140)
37 PRK15430 putative chlorampheni 98.5 6.2E-06 1.3E-10 83.1 18.4 140 310-453 5-144 (296)
38 TIGR00688 rarD rarD protein. T 98.5 6E-06 1.3E-10 81.1 17.6 138 313-453 2-141 (256)
39 PF06800 Sugar_transport: Suga 98.3 0.00018 3.9E-09 71.5 21.1 175 261-450 84-267 (269)
40 TIGR03340 phn_DUF6 phosphonate 98.2 5E-05 1.1E-09 75.8 15.1 133 315-454 3-135 (281)
41 KOG4314|consensus 98.0 6.7E-05 1.5E-09 70.5 11.9 208 237-456 67-278 (290)
42 PF13536 EmrE: Multidrug resis 98.0 0.0002 4.4E-09 61.7 14.0 103 352-457 6-109 (113)
43 PLN00411 nodulin MtN21 family 97.9 0.00041 8.8E-09 72.1 16.7 137 314-454 14-156 (358)
44 COG2962 RarD Predicted permeas 97.8 0.00069 1.5E-08 67.4 15.5 141 311-456 5-146 (293)
45 PF00892 EamA: EamA-like trans 97.8 0.00012 2.7E-09 62.5 9.0 102 151-296 19-125 (126)
46 TIGR00950 2A78 Carboxylate/Ami 97.8 0.00044 9.4E-09 67.6 13.7 114 329-454 5-119 (260)
47 PF13536 EmrE: Multidrug resis 97.7 0.00039 8.3E-09 60.0 10.8 44 255-300 66-109 (113)
48 PRK02971 4-amino-4-deoxy-L-ara 97.6 0.0016 3.4E-08 58.0 13.8 65 390-454 56-122 (129)
49 PF08449 UAA: UAA transporter 97.6 0.0009 2E-08 67.7 13.7 128 327-461 14-143 (303)
50 PRK11272 putative DMT superfam 97.6 0.0029 6.3E-08 63.5 16.7 127 318-454 13-141 (292)
51 PF05653 Mg_trans_NIPA: Magnes 97.6 0.00045 9.8E-09 70.0 10.5 199 240-454 67-292 (300)
52 PTZ00343 triose or hexose phos 97.6 0.0032 6.8E-08 65.2 16.8 139 311-454 47-186 (350)
53 TIGR00817 tpt Tpt phosphate/ph 97.5 0.0042 9.1E-08 62.5 16.1 125 323-453 12-136 (302)
54 TIGR00776 RhaT RhaT L-rhamnose 97.4 0.0019 4.2E-08 65.0 12.7 132 314-456 2-138 (290)
55 PRK11453 O-acetylserine/cystei 97.3 0.0087 1.9E-07 60.3 16.4 124 316-454 7-132 (299)
56 PRK11689 aromatic amino acid e 97.3 0.0095 2.1E-07 59.9 15.7 129 314-454 5-137 (295)
57 PF03151 TPT: Triose-phosphate 97.3 0.005 1.1E-07 55.2 12.3 56 239-296 97-152 (153)
58 PRK15051 4-amino-4-deoxy-L-ara 97.2 0.0039 8.4E-08 54.0 10.2 60 393-452 48-107 (111)
59 COG0697 RhaT Permeases of the 97.0 0.044 9.5E-07 53.6 17.2 140 312-457 6-146 (292)
60 KOG1581|consensus 96.9 0.00064 1.4E-08 67.9 2.8 34 234-267 94-127 (327)
61 KOG1580|consensus 96.8 0.00017 3.8E-09 69.4 -1.4 31 237-267 99-129 (337)
62 PF04142 Nuc_sug_transp: Nucle 96.8 0.0042 9E-08 61.2 8.1 77 383-459 18-94 (244)
63 PF06027 DUF914: Eukaryotic pr 96.8 0.029 6.4E-07 57.7 14.1 75 382-456 79-153 (334)
64 PF04657 DUF606: Protein of un 96.5 0.12 2.7E-06 46.4 14.9 129 317-451 5-138 (138)
65 PRK13499 rhamnose-proton sympo 96.5 0.089 1.9E-06 54.4 15.3 140 310-458 4-157 (345)
66 PRK10452 multidrug efflux syst 96.4 0.026 5.5E-07 49.7 9.5 63 394-456 42-105 (120)
67 PF06800 Sugar_transport: Suga 96.4 0.019 4.2E-07 57.2 9.5 116 340-461 9-129 (269)
68 COG2510 Predicted membrane pro 96.3 0.015 3.2E-07 51.4 7.2 103 151-296 31-138 (140)
69 KOG1582|consensus 96.3 0.0013 2.9E-08 64.7 0.5 29 239-267 122-150 (367)
70 PRK10532 threonine and homoser 96.2 0.34 7.4E-06 48.6 17.5 106 311-426 10-115 (293)
71 PRK09541 emrE multidrug efflux 96.0 0.065 1.4E-06 46.4 9.6 59 397-455 45-104 (110)
72 PRK10650 multidrug efflux syst 95.8 0.26 5.6E-06 42.6 12.6 58 395-452 48-106 (109)
73 PRK15051 4-amino-4-deoxy-L-ara 95.7 0.3 6.4E-06 42.2 12.8 37 258-296 72-108 (111)
74 PRK11431 multidrug efflux syst 95.7 0.25 5.3E-06 42.4 11.8 60 394-453 41-101 (105)
75 KOG2234|consensus 95.3 0.58 1.3E-05 48.1 15.1 69 389-457 99-167 (345)
76 PRK13499 rhamnose-proton sympo 95.1 4.9 0.00011 41.7 27.7 216 236-455 86-342 (345)
77 PRK10452 multidrug efflux syst 95.0 0.63 1.4E-05 40.9 12.4 73 184-299 32-105 (120)
78 COG2076 EmrE Membrane transpor 95.0 0.22 4.9E-06 42.7 9.3 59 397-455 45-104 (106)
79 PF00893 Multi_Drug_Res: Small 94.4 0.31 6.8E-06 40.6 8.8 52 394-445 41-93 (93)
80 PF05653 Mg_trans_NIPA: Magnes 94.4 0.28 6.1E-06 49.8 10.2 121 310-456 4-124 (300)
81 KOG2922|consensus 93.7 0.13 2.9E-06 52.1 6.0 186 257-454 98-306 (335)
82 COG2076 EmrE Membrane transpor 93.6 1.4 3.1E-05 37.8 11.4 72 184-298 32-104 (106)
83 COG3238 Uncharacterized protei 93.6 2.8 6E-05 38.3 13.8 135 314-453 6-145 (150)
84 PRK09541 emrE multidrug efflux 93.4 2.2 4.7E-05 36.9 12.3 37 261-299 69-105 (110)
85 KOG4510|consensus 93.3 0.026 5.5E-07 55.8 0.3 69 386-454 101-169 (346)
86 PRK11431 multidrug efflux syst 93.3 1.7 3.7E-05 37.3 11.4 35 261-297 68-102 (105)
87 PRK02971 4-amino-4-deoxy-L-ara 93.0 0.49 1.1E-05 42.1 8.0 58 239-298 64-123 (129)
88 COG4975 GlcU Putative glucose 93.0 0.01 2.2E-07 58.0 -3.0 202 237-453 73-284 (288)
89 PRK10650 multidrug efflux syst 92.1 3.6 7.9E-05 35.5 12.0 33 261-295 74-106 (109)
90 TIGR00803 nst UDP-galactose tr 91.1 0.47 1E-05 45.5 6.0 67 206-295 2-68 (222)
91 PF06379 RhaT: L-rhamnose-prot 89.8 12 0.00026 38.7 15.0 146 310-459 4-158 (344)
92 COG4975 GlcU Putative glucose 86.1 0.24 5.2E-06 48.6 0.2 132 314-461 3-143 (288)
93 PF07857 DUF1632: CEO family ( 85.8 1.8 4E-05 42.9 6.3 83 379-461 52-141 (254)
94 PF00893 Multi_Drug_Res: Small 85.3 8.3 0.00018 32.0 9.1 26 261-288 68-93 (93)
95 COG5006 rhtA Threonine/homoser 84.8 2.6 5.6E-05 41.8 6.5 59 238-298 225-283 (292)
96 PF10639 UPF0546: Uncharacteri 84.0 1.6 3.5E-05 38.0 4.3 59 393-451 52-111 (113)
97 KOG3912|consensus 83.2 3 6.5E-05 41.9 6.3 66 389-454 93-158 (372)
98 PF10639 UPF0546: Uncharacteri 80.6 3.8 8.1E-05 35.7 5.3 37 257-295 76-112 (113)
99 PF04657 DUF606: Protein of un 80.5 24 0.00053 31.5 10.8 57 150-207 29-89 (138)
100 KOG2765|consensus 77.8 1.6 3.5E-05 45.3 2.5 74 384-457 161-234 (416)
101 KOG1441|consensus 74.7 39 0.00084 34.7 11.5 76 380-455 81-178 (316)
102 KOG2563|consensus 59.6 91 0.002 33.8 10.9 113 3-138 174-298 (480)
103 KOG1583|consensus 59.5 26 0.00055 35.4 6.4 37 261-299 280-316 (330)
104 KOG2890|consensus 59.5 40 0.00086 34.3 7.8 154 6-169 81-255 (326)
105 KOG4314|consensus 58.4 15 0.00033 35.2 4.4 60 395-454 66-125 (290)
106 PF06570 DUF1129: Protein of u 52.4 91 0.002 29.7 8.9 23 106-130 79-101 (206)
107 COG3238 Uncharacterized protei 45.5 2E+02 0.0043 26.4 9.4 22 275-296 124-145 (150)
108 PRK06638 NADH:ubiquinone oxido 45.5 2.7E+02 0.006 26.4 12.2 25 341-365 54-78 (198)
109 KOG1444|consensus 43.6 3.7E+02 0.0079 27.7 11.8 135 314-453 13-148 (314)
110 PF04342 DUF486: Protein of un 41.8 32 0.0007 29.5 3.4 29 423-451 77-105 (108)
111 PF11044 TMEMspv1-c74-12: Plec 41.5 30 0.00065 25.0 2.7 10 447-456 21-30 (49)
112 KOG2766|consensus 38.8 9 0.00019 38.2 -0.4 71 382-452 78-148 (336)
113 KOG1443|consensus 36.1 22 0.00047 36.4 1.8 29 239-267 100-128 (349)
114 COG3169 Uncharacterized protei 35.4 63 0.0014 27.5 4.1 30 423-452 84-113 (116)
115 PF04971 Lysis_S: Lysis protei 34.8 40 0.00087 26.6 2.7 23 442-464 42-64 (68)
116 cd01324 cbb3_Oxidase_CcoQ Cyto 33.8 45 0.00098 24.4 2.7 22 442-463 19-40 (48)
117 PF05297 Herpes_LMP1: Herpesvi 32.6 15 0.00032 37.0 0.0 70 275-351 75-144 (381)
118 PRK02237 hypothetical protein; 29.1 88 0.0019 27.0 4.1 36 262-299 72-107 (109)
119 PF06966 DUF1295: Protein of u 28.6 75 0.0016 31.0 4.2 30 432-461 115-144 (235)
120 PF02694 UPF0060: Uncharacteri 27.7 3.2E+02 0.0069 23.6 7.2 45 411-455 60-104 (107)
121 PRK02237 hypothetical protein; 27.5 4.1E+02 0.0089 23.0 8.8 46 411-456 62-107 (109)
122 PF02694 UPF0060: Uncharacteri 27.5 83 0.0018 27.1 3.7 36 262-299 70-105 (107)
123 PRK12437 prolipoprotein diacyl 27.4 48 0.001 33.1 2.7 24 433-456 234-257 (269)
124 PF05545 FixQ: Cbb3-type cytoc 25.2 88 0.0019 22.6 3.0 19 442-460 18-36 (49)
125 PF14880 COX14: Cytochrome oxi 25.0 53 0.0011 25.0 1.9 24 432-455 14-37 (59)
126 PRK11562 nitrite transporter N 24.4 7.3E+02 0.016 24.8 13.6 37 433-470 228-264 (268)
127 KOG2922|consensus 24.0 47 0.001 34.2 1.8 123 308-456 16-138 (335)
128 PRK00052 prolipoprotein diacyl 23.3 70 0.0015 31.9 3.0 23 433-455 236-258 (269)
129 PF15099 PIRT: Phosphoinositid 22.1 88 0.0019 27.8 2.9 20 432-451 75-94 (129)
130 TIGR00739 yajC preprotein tran 22.0 82 0.0018 25.8 2.6 11 443-453 9-19 (84)
No 1
>KOG1581|consensus
Probab=100.00 E-value=2.4e-66 Score=503.80 Aligned_cols=318 Identities=45% Similarity=0.790 Sum_probs=298.1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCc
Q psy14395 104 SVKQDALLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIIN-QPRHTVPL 182 (471)
Q Consensus 104 ~~~~~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~-~~~~~~p~ 182 (471)
...++.+++++|+.|||++|++||++||||+|++| ++++++|.+++|++++|++.+.+++..++.+++ +.+++.|+
T Consensus 7 ~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y---~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl 83 (327)
T KOG1581|consen 7 GMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPY---GEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPL 83 (327)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcceeeccc---CcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCch
Confidence 35778999999999999999999999999999999 668899999999999999999999988877654 57788999
Q ss_pred hhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHH
Q psy14395 183 YKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILA 262 (471)
Q Consensus 183 ~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~ 262 (471)
|+|..+|++|..+.+|+++||||+|||||+++||||++|||+||.++++
T Consensus 84 ~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~------------------------------- 132 (327)
T KOG1581|consen 84 YKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYG------------------------------- 132 (327)
T ss_pred hHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhc-------------------------------
Confidence 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcC-CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy14395 263 VMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTS-DKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKV 341 (471)
Q Consensus 263 v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~-~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~ 341 (471)
+||+.+||+++.+++.||.+|++.+.+++ ++...+++..|+.++..++++||+++++||++++++++
T Consensus 133 ------------~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~ 200 (327)
T KOG1581|consen 133 ------------RKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKV 200 (327)
T ss_pred ------------CccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCc
Confidence 99999999999999999999998865432 23445688999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Q psy14395 342 TSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGL 421 (471)
Q Consensus 342 s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~ 421 (471)
++++||+++|++++++....++.+|.+.++++|...||+.++|+++++.|+++||.|+|++|+++||++.++++++||++
T Consensus 201 s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~ 280 (327)
T KOG1581|consen 201 SSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMV 280 (327)
T ss_pred cHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q psy14395 422 AILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLN 467 (471)
Q Consensus 422 sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~~~~k~~ 467 (471)
++++|+++||||+++.||+|+.+||+|+++.++.|+|++..++|+.
T Consensus 281 si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~~~~~k~~ 326 (327)
T KOG1581|consen 281 SIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKNQPRKKKA 326 (327)
T ss_pred HHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhccCcccccC
Confidence 9999999999999999999999999999999999988665555544
No 2
>KOG1580|consensus
Probab=100.00 E-value=3.1e-60 Score=445.19 Aligned_cols=322 Identities=30% Similarity=0.452 Sum_probs=295.3
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCC
Q psy14395 103 SSVKQDALLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIIN-QPRHTVP 181 (471)
Q Consensus 103 ~~~~~~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~-~~~~~~p 181 (471)
++-.++..++.+|+.||+.||..|||.||||.+.+|+.+|+.+|+|++.+.++|+||.++.+++-+...+++ ...++.|
T Consensus 5 ~s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~ 84 (337)
T KOG1580|consen 5 RSWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTP 84 (337)
T ss_pred ccccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCc
Confidence 345677889999999999999999999999999999877888999999999999999999999977666655 4567788
Q ss_pred chhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHH
Q psy14395 182 LYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKIL 261 (471)
Q Consensus 182 ~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi 261 (471)
-+.|..+|+++.++++.+|.|++|++||||++.|||||||||++|.++.+
T Consensus 85 ~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~------------------------------ 134 (337)
T KOG1580|consen 85 TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAH------------------------------ 134 (337)
T ss_pred chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhc------------------------------
Confidence 89999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy14395 262 AVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKV 341 (471)
Q Consensus 262 ~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~ 341 (471)
|+|+|++|.++++|++||++|++.+.+.. ..+.+...+|-+++++|+.+||+++..||++.+.|..
T Consensus 135 -------------KsY~w~kY~cVL~IV~GValFmYK~~Kv~-g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~ 200 (337)
T KOG1580|consen 135 -------------KSYHWRKYCCVLMIVVGVALFMYKENKVG-GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQR 200 (337)
T ss_pred -------------ccccHHHHHHHHHHHHHHHHhhccccccC-CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhcc
Confidence 99999999999999999999999875433 3345567789999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Q psy14395 342 TSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGL 421 (471)
Q Consensus 342 s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~ 421 (471)
+..+||+|+|++|.+.+...++++||+++.+.|..+||..++++.++++++.+||.|+|.++..+||+++++++|+||++
T Consensus 201 ~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfF 280 (337)
T KOG1580|consen 201 TGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFF 280 (337)
T ss_pred CchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhhhhhhhhcc
Q psy14395 422 AILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQ 468 (471)
Q Consensus 422 sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~~~~k~~~ 468 (471)
+|+.|+++|+||++..||+|..+||.|+..+....++.+....||.+
T Consensus 281 Til~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~~t~akkp~ 327 (337)
T KOG1580|consen 281 TILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAPMTAAKKPL 327 (337)
T ss_pred HHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCccccccCCC
Confidence 99999999999999999999999999999998876655544444443
No 3
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=100.00 E-value=1e-48 Score=394.58 Aligned_cols=297 Identities=38% Similarity=0.628 Sum_probs=272.5
Q ss_pred HHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCchhhhHhHHH
Q psy14395 113 LFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIIN-QPRHTVPLYKYGFCSFT 191 (471)
Q Consensus 113 ~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~-~~~~~~p~~~~~~~s~~ 191 (471)
++|++|+|++|+.||++||++++++|. . ++|++++++|++++.+.+.++....+ +++++.|+++|.+.+++
T Consensus 2 ~~~~~~i~~~~~~~g~~qE~i~~~~~~-------~-~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (303)
T PF08449_consen 2 LICVAGIFGGCCSYGILQEKIMTTPYG-------S-PFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFL 73 (303)
T ss_pred EeeHHHHHHHHHHHHHHHHHHHcCCCC-------C-cccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHH
Confidence 579999999999999999999987751 1 78999999999999999988877776 67788999999999999
Q ss_pred HHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhh
Q psy14395 192 NIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVS 271 (471)
Q Consensus 192 ~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~ 271 (471)
+.++++++|+||+|+|+|+|+++||+|++|+|+++.++.+
T Consensus 74 ~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~---------------------------------------- 113 (303)
T PF08449_consen 74 FFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILG---------------------------------------- 113 (303)
T ss_pred HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcC----------------------------------------
Confidence 9999999999999999999999999999999999999888
Q ss_pred CCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCC--CcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHH
Q psy14395 272 AKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVG--KTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFG 349 (471)
Q Consensus 272 ~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~--~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~ 349 (471)
|||+++||++++++++|++++..+|.+.+++.+ ......|++++++|+++||+++++||+++++++.+++|+|+|
T Consensus 114 ---k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy 190 (303)
T PF08449_consen 114 ---KRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFY 190 (303)
T ss_pred ---ccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 999999999999999999999988764431111 112234999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--hcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q psy14395 350 TNLFSCLFTAVSLLQ--QGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSC 427 (471)
Q Consensus 350 ~~l~s~i~~l~~li~--~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSv 427 (471)
+|++++++.++..+. +||..++.++..+||+.+.+++++++++++||.+++.+++++||++.++++++||++++++|+
T Consensus 191 ~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~ 270 (303)
T PF08449_consen 191 TNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSV 270 (303)
T ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHH
Confidence 999999999888877 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy14395 428 IIYAHPISLLGILGILMVLMAVLLQAYCKLRKA 460 (471)
Q Consensus 428 llFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k 460 (471)
++|||++++.||+|+++++.|+.+|++.|+|||
T Consensus 271 ~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 271 IIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 999999999999999999999999999887654
No 4
>KOG1582|consensus
Probab=100.00 E-value=3.1e-48 Score=370.70 Aligned_cols=301 Identities=26% Similarity=0.436 Sum_probs=278.9
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccc-hhHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy14395 101 VKSSVKQDALLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFR-DSQFLVFVNRILALVVSGLSLLIINQPRHT 179 (471)
Q Consensus 101 ~~~~~~~~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~-~~~fL~~~q~l~~~i~~~~~~~~~~~~~~~ 179 (471)
-+.+++++|.|+++|.+|+|+.|+.||++||.|++. ++|+ +.|+++++|...-..++.+++...+.+++.
T Consensus 33 ~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~---------~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~ 103 (367)
T KOG1582|consen 33 FNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNV---------EGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRV 103 (367)
T ss_pred eccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhcc---------ccCcccchHHHHHHHHHHHhhhheEEEeeccccee
Confidence 477889999999999999999999999999999975 3565 778888888776666666655555557788
Q ss_pred CCchhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhh
Q psy14395 180 VPLYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCK 259 (471)
Q Consensus 180 ~p~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~ 259 (471)
.||+.|..+++...+++.++|.|+.|++||+|+++||||.+|||++|.++.+
T Consensus 104 iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqG---------------------------- 155 (367)
T KOG1582|consen 104 IPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQG---------------------------- 155 (367)
T ss_pred cchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeecc----------------------------
Confidence 9999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy14395 260 ILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESY 339 (471)
Q Consensus 260 pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~ 339 (471)
|||++.++.++.++++|+++|++.|.+ .+++++..|+.++.+++++||+.++.||+.++.+
T Consensus 156 ---------------kRY~v~d~~aA~lm~lGli~FTLADs~----~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~ 216 (367)
T KOG1582|consen 156 ---------------KRYGVHDYIAAMLMSLGLIWFTLADSQ----TSPNFNLIGVMMISGALLADAVIGNVQEKAMKMN 216 (367)
T ss_pred ---------------ccccHHHHHHHHHHHHHHHhhhhcccc----cCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhC
Confidence 999999999999999999999999874 3588999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCch-hhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHH
Q psy14395 340 KVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPS-FTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVR 418 (471)
Q Consensus 340 ~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~-~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~r 418 (471)
+-++.||.+|...++.++.+..++.+||+..++.|+.+||. .....++.++.+++|+.++...++.+||.+++.++|.|
T Consensus 217 ~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaR 296 (367)
T KOG1582|consen 217 PASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTAR 296 (367)
T ss_pred CCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhH
Confidence 99999999999999999999999999999999999999997 66778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhh
Q psy14395 419 QGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL 457 (471)
Q Consensus 419 kv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~ 457 (471)
|.+++++|+++|.+|+|.++..|..+|+.|+++..+.|+
T Consensus 297 KavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 297 KAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred hHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 999999999999999999999999999999999999884
No 5
>KOG1583|consensus
Probab=99.97 E-value=1.9e-32 Score=263.28 Aligned_cols=292 Identities=18% Similarity=0.248 Sum_probs=230.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhhHhHH
Q psy14395 111 LLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIINQPRHTVPLYKYGFCSF 190 (471)
Q Consensus 111 ~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~~~~~~~p~~~~~~~s~ 190 (471)
+-+..+++++++|+.+.+.-|.+.+.+ ++.++..|+.||+ +-++.+.+...-....++++|++.|+....
T Consensus 3 ~a~~ai~~vf~GCcsnvv~lE~L~~~~----pgsgNLITFaqFl------Fia~eGlif~skf~~~k~kiplk~Y~i~V~ 72 (330)
T KOG1583|consen 3 MAAAAISLVFGGCCSNVVFLELLVRNE----PGSGNLITFAQFL------FIATEGLIFTSKFFTVKPKIPLKDYAITVA 72 (330)
T ss_pred hHHHHHHHHHHhhhchHHHHHHHHHhC----CCCeeehHHHHHH------HHHHhceeeeccccccCCCCchhhhheehh
Confidence 345678899999999999999999654 5567766666654 334555444322223568999999999999
Q ss_pred HHHhhhHHHhhhhcc-cChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHH
Q psy14395 191 TNIMSSWCQYEALKY-ISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKL 269 (471)
Q Consensus 191 ~~~~~~~~~n~aL~y-vs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~l 269 (471)
.....+.++|.|++| +++|.++++||..++..|++++++.+
T Consensus 73 mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~-------------------------------------- 114 (330)
T KOG1583|consen 73 MFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLG-------------------------------------- 114 (330)
T ss_pred eeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhcc--------------------------------------
Confidence 999999999999999 99999999999999988888888888
Q ss_pred hhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCC---------CCCCcch--hhHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14395 270 VSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSD---------KVGKTTT--LSGVILLALYLSCDSFTSNWQGVLFES 338 (471)
Q Consensus 270 f~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~---------~~~~~~~--~~G~~lll~sl~~dal~~~~q~~l~~~ 338 (471)
|||+.+||.+++++++|++++++.++++-+ +...+.. ..|+.++..+++.+|..+.+||.++++
T Consensus 115 -----k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~k 189 (330)
T KOG1583|consen 115 -----KRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQK 189 (330)
T ss_pred -----ceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999876543210 1112222 368888999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhh------------cCchhhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy14395 339 YKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFML------------QFPSFTLDCILLSISSAAGQLFVFFTIYKF 406 (471)
Q Consensus 339 ~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~------------~~p~~~~~ill~~l~~~lgq~~if~~i~~~ 406 (471)
|+-++-|.|||+++.+.++.+.. -+++.+.+.-.. .-|..|++++...+..+.+--.+|..-+++
T Consensus 190 yGKh~~EalFytH~LsLP~Flf~---~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~ 266 (330)
T KOG1583|consen 190 YGKHWKEALFYTHFLSLPLFLFM---GDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTET 266 (330)
T ss_pred hcCChHHHHHHHHHhccchHHHh---cchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhcee
Confidence 99999999999999998765432 233333222111 135566666666666666666667778999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhh
Q psy14395 407 GAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLR 458 (471)
Q Consensus 407 galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r 458 (471)
+++|.+++.|+||.++.++|++.|.+|+|+++|+|..+||.|..+|+-...+
T Consensus 267 ~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~ 318 (330)
T KOG1583|consen 267 SSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNH 318 (330)
T ss_pred cceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999998888655433
No 6
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.97 E-value=1.7e-28 Score=252.41 Aligned_cols=288 Identities=13% Similarity=0.106 Sum_probs=221.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-----
Q psy14395 107 QDALLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIINQPRHTVP----- 181 (471)
Q Consensus 107 ~~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~~~~~~~p----- 181 (471)
...+++...+..||.+...+.++++.++ +.+++|++++++|.+++.+.+.+.+....+++++.+
T Consensus 45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl-----------~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 113 (350)
T PTZ00343 45 NFKWKLALLFLTWYALNVLYVVDNKLAL-----------NMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLF 113 (350)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHH-----------HhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 3589999999999999999999999998 347899999999999998876655443222222221
Q ss_pred chhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHH
Q psy14395 182 LYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKIL 261 (471)
Q Consensus 182 ~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi 261 (471)
+++..+.|+++..... ..+.|++++++++.+++|++.|+
T Consensus 114 ~~~llp~gl~~~~~~~-----------------------------------------~~~~sl~~~svs~~~iika~~Pv 152 (350)
T PTZ00343 114 LKNFLPQGLCHLFVHF-----------------------------------------GAVISMGLGAVSFTHVVKAAEPV 152 (350)
T ss_pred HHHHHHHHHHHHHHHH-----------------------------------------HHHHHHhhccHHHHHHHHHhhHH
Confidence 1223333333322222 34567777788888888888888
Q ss_pred HHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhc--
Q psy14395 262 AVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESY-- 339 (471)
Q Consensus 262 ~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~-- 339 (471)
++++++++++| ||++++++++++++++|+++.+.++ .++++.|++++++|.++.++++++.|++++++
T Consensus 153 ft~lls~~~l~--ek~s~~~~l~l~l~v~Gv~l~~~~~--------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~ 222 (350)
T PTZ00343 153 FTALLSILFLK--QFLNLYAYLSLIPIVGGVALASVKE--------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSE 222 (350)
T ss_pred HHHHHHHHHhC--CCccHHHHHHHHHHHHHHHheeccc--------chhHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 88888888888 9999999999999999999987533 34578899999999999999999999988764
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHH-Hhcch-hhhhh----hhhcC--chhhHHHHHHHHHHHHHHHHHHHHHHhcCh
Q psy14395 340 ---KVTSLQMMFGTNLFSCLFTAVSLL-QQGGF-YQSLH----FMLQF--PSFTLDCILLSISSAAGQLFVFFTIYKFGA 408 (471)
Q Consensus 340 ---~~s~~~mmf~~~l~s~i~~l~~li-~~g~l-~~~~~----f~~~~--p~~~~~ill~~l~~~lgq~~if~~i~~~ga 408 (471)
+.++.++..+..+++.++++|... .|+.. ...+. ....+ ...+..++..+++.++.+...|+++++.+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~ 302 (350)
T PTZ00343 223 IGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQ 302 (350)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 367888888888999999888764 44321 11110 00111 112233444566677778888899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 409 IVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 409 lt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
+++++.+++||++++++|+++|||++|+.|++|.++++.|+++|++.|
T Consensus 303 ~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 303 VTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred hHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999998763
No 7
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.96 E-value=1.2e-27 Score=240.61 Aligned_cols=287 Identities=10% Similarity=0.053 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CCchhhhH
Q psy14395 111 LLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIINQPRHT---VPLYKYGF 187 (471)
Q Consensus 111 ~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~~~~~~---~p~~~~~~ 187 (471)
++...+..||.++..+.++|+.++ +.|++|.++++.|..++.+...+.+....+++++ .+++...+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l-----------~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLL-----------NVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLP 70 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------hhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 567788999999999999999888 3489999999999998877665543221122222 23445666
Q ss_pred hHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHH
Q psy14395 188 CSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMG 267 (471)
Q Consensus 188 ~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~ 267 (471)
.++++.....++|.+++|++.+..++.|++.|+.+++++.+
T Consensus 71 ~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~--------------------------------------- 111 (302)
T TIGR00817 71 VAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAF--------------------------------------- 111 (302)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHH---------------------------------------
Confidence 77777666777777777666666555555555555555544
Q ss_pred HHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHH
Q psy14395 268 KLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMM 347 (471)
Q Consensus 268 ~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mm 347 (471)
++| ||++++++++++++++|+++....+ .+++..|+++++++.++.+++.++.|+..++.+.++.+++
T Consensus 112 --~~~--e~~~~~~~~~l~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~ 179 (302)
T TIGR00817 112 --FLG--QEFPSTLWLSLLPIVGGVALASDTE--------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLY 179 (302)
T ss_pred --HhC--CCCcHHHHHHHHHHHHHHhhhcCCc--------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHH
Confidence 444 9999999999999999998764221 2356789999999999999999999998765568899999
Q ss_pred HHHHHHHHHHHHHHHHHhcchh-hhhhhhh----cCchhhHH-HHHHHH-HHHHHHHHHHHHHHhcChhHHHHHHHHHHH
Q psy14395 348 FGTNLFSCLFTAVSLLQQGGFY-QSLHFML----QFPSFTLD-CILLSI-SSAAGQLFVFFTIYKFGAIVFTIIMTVRQG 420 (471)
Q Consensus 348 f~~~l~s~i~~l~~li~~g~l~-~~~~f~~----~~p~~~~~-ill~~l-~~~lgq~~if~~i~~~galt~sii~t~rkv 420 (471)
+|.+.++.++++|.....++.. ...+... ..+...+. .+..+. +....+...+..+++.||.++++.++++|+
T Consensus 180 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv 259 (302)
T TIGR00817 180 AYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRV 259 (302)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhh
Confidence 9999999988888765432211 1101111 11111222 222232 344456677789999999999999999999
Q ss_pred HHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhh
Q psy14395 421 LAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK 459 (471)
Q Consensus 421 ~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~ 459 (471)
+++++|++++||++|+.|++|.++++.|+++|++.|+||
T Consensus 260 ~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~ 298 (302)
T TIGR00817 260 VVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQK 298 (302)
T ss_pred heeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999765443
No 8
>KOG1441|consensus
Probab=99.96 E-value=4.3e-29 Score=250.68 Aligned_cols=296 Identities=17% Similarity=0.187 Sum_probs=236.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhcCCC----CCC
Q psy14395 105 VKQDALLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIINQPR----HTV 180 (471)
Q Consensus 105 ~~~~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~~~~----~~~ 180 (471)
..++......+..-||+++....+++++++.. ..|++|.+++.+|..++.+...+...++-.++ ++.
T Consensus 11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~---------~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~ 81 (316)
T KOG1441|consen 11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSK---------YGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKL 81 (316)
T ss_pred ccchhHHHHHHHHHHhhhheeeEEeeHhhhcc---------CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc
Confidence 34578888899999999999999999999942 37999999999987777766555544433333 335
Q ss_pred CchhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhH
Q psy14395 181 PLYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKI 260 (471)
Q Consensus 181 p~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~p 260 (471)
+++..+++|+.++.+.+++|.|++|+++++.++.|+..|..+.++
T Consensus 82 ~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~----------------------------------- 126 (316)
T KOG1441|consen 82 PLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLL----------------------------------- 126 (316)
T ss_pred chHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHH-----------------------------------
Confidence 677788888888888888888777777665555555555555554
Q ss_pred HHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh--h
Q psy14395 261 LAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFE--S 338 (471)
Q Consensus 261 i~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~--~ 338 (471)
++++.+ |++++..++++++++.||++.+..| .++++.|++.++.+.+..++++++++++++ +
T Consensus 127 ------~~~~~~--~~~s~~~~lsL~piv~GV~ias~~e--------~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~ 190 (316)
T KOG1441|consen 127 ------SVLLLG--KTYSSMTYLSLLPIVFGVAIASVTE--------LSFNLFGFISAMISNLAFALRNILSKKLLTSKG 190 (316)
T ss_pred ------HHHHhC--CCCcceEEEEEEEeeeeEEEeeecc--------ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 455555 9999999999999999999998754 468999999999999999999999999994 5
Q ss_pred cCCCHHHHHHHHHHHHHHHHH-HHHH-Hhcchhhhhhhhh-cCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHH
Q psy14395 339 YKVTSLQMMFGTNLFSCLFTA-VSLL-QQGGFYQSLHFML-QFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIM 415 (471)
Q Consensus 339 ~~~s~~~mmf~~~l~s~i~~l-~~li-~~g~l~~~~~f~~-~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~ 415 (471)
++.|+.+++.|+.+++.++++ |... .+|+.. . .+.. ..+......++.+++.++.|+..|..+++++|+|.++.+
T Consensus 191 ~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g 268 (316)
T KOG1441|consen 191 ESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAPWFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAG 268 (316)
T ss_pred cccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccccchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhc
Confidence 689999999999999999988 7653 345432 1 1111 111112334455699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhhhh
Q psy14395 416 TVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASL 462 (471)
Q Consensus 416 t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~~ 462 (471)
++|+++.++.|+++|++|+|+.|.+|+++.+.|+++|++.|.++|++
T Consensus 269 ~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 269 HMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG 315 (316)
T ss_pred cceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999999999998776554
No 9
>KOG1443|consensus
Probab=99.90 E-value=1.6e-22 Score=197.54 Aligned_cols=287 Identities=15% Similarity=0.188 Sum_probs=229.9
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhcCCCC--C--CC
Q psy14395 106 KQDALLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIINQPRH--T--VP 181 (471)
Q Consensus 106 ~~~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~~~~~--~--~p 181 (471)
+.+....+..+.++|.+-+.-..+|.+.. ..|++|+|++.+|.++-+.++.......+++.+ + ..
T Consensus 11 ~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~-----------~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~s 79 (349)
T KOG1443|consen 11 LMNRVLTLALVLLYYFLSIGLTFYFKWLT-----------KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLS 79 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-----------cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCc
Confidence 34444444455888888887777777665 349999999999999999998887766544322 2 33
Q ss_pred chhh----hHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhh
Q psy14395 182 LYKY----GFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKS 257 (471)
Q Consensus 182 ~~~~----~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks 257 (471)
|..| +++++...+...++|+|++|++.+.|++.||+.++++.+++.++.-
T Consensus 80 w~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~l-------------------------- 133 (349)
T KOG1443|consen 80 WRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKL-------------------------- 133 (349)
T ss_pred HHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHh--------------------------
Confidence 4444 5999999999999999999999999999999999999999988777
Q ss_pred hhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14395 258 CKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFE 337 (471)
Q Consensus 258 ~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~ 337 (471)
||.+|.-.+.++++.+|++++++++ ++++..|+.+++.+.++.|+++.+.+.+++
T Consensus 134 -----------------Ek~~w~L~l~v~lI~~Glflft~Ks--------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~ 188 (349)
T KOG1443|consen 134 -----------------EKFRWALVLIVLLIAVGLFLFTYKS--------TQFNIEGFFLVLAASLLSGLRWAFTQMLLR 188 (349)
T ss_pred -----------------HHHHHHHHHHHHHHhhheeEEEecc--------cceeehhHHHHHHHHHhhhhhHHHHHHHHh
Confidence 9999999999999999999999864 468999999999999999999999888888
Q ss_pred hcC---CCHHHHHHHHHHHHHHHHHHH-HHHhcchhhhhh-hhhc--CchhhHHHHHH---HHHHHHHHHHHHHHHHhcC
Q psy14395 338 SYK---VTSLQMMFGTNLFSCLFTAVS-LLQQGGFYQSLH-FMLQ--FPSFTLDCILL---SISSAAGQLFVFFTIYKFG 407 (471)
Q Consensus 338 ~~~---~s~~~mmf~~~l~s~i~~l~~-li~~g~l~~~~~-f~~~--~p~~~~~ill~---~l~~~lgq~~if~~i~~~g 407 (471)
+.+ .+|..++++..++..+.++|. +.+||......+ .+.. +...++.+..+ ++.+++.-..-|..+.+++
T Consensus 189 ~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts 268 (349)
T KOG1443|consen 189 NQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTS 268 (349)
T ss_pred cCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeecc
Confidence 764 589999999999888777664 467775332111 1111 22234433333 3444555666788899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 408 AIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 408 alt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
.+|.++++..|.+.+++++.++.++.++..+|+|..+...|+.+|..
T Consensus 269 ~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 269 SLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred ceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999833
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.90 E-value=1.7e-21 Score=197.90 Aligned_cols=233 Identities=13% Similarity=0.194 Sum_probs=189.5
Q ss_pred CCCCchhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhh
Q psy14395 178 HTVPLYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKS 257 (471)
Q Consensus 178 ~~~p~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks 257 (471)
.+.|+|+|++.+++.+.++++.+.|++|.+....++..+..++.+|++++++.+
T Consensus 75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~-------------------------- 128 (334)
T PF06027_consen 75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLK-------------------------- 128 (334)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHH--------------------------
Confidence 357889999999999999999999999999988788788877777777776666
Q ss_pred hhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy14395 258 CKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSD-KVGKTTTLSGVILLALYLSCDSFTSNWQGVLF 336 (471)
Q Consensus 258 ~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~-~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~ 336 (471)
+||++.|+++++++++|+++....|....+ .++.++...|+++++++++++|++++.||++.
T Consensus 129 -----------------~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v 191 (334)
T PF06027_consen 129 -----------------RRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLV 191 (334)
T ss_pred -----------------hhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999888754321 22456789999999999999999999999998
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHH-HHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHH
Q psy14395 337 ESYKVTSLQMMFGTNLFSCLFTAVSL-LQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIM 415 (471)
Q Consensus 337 ~~~~~s~~~mmf~~~l~s~i~~l~~l-i~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~ 415 (471)
++ .+..+.+....+++++++.+.+ +.|.+- ++-..++++.....+.++++-++.....-..++..||+..++..
T Consensus 192 ~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~~---i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL 266 (334)
T PF06027_consen 192 KK--APRVEFLGMLGLFGFIISGIQLAILERSG---IESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSL 266 (334)
T ss_pred cc--CCHHHHHHHHHHHHHHHHHHHHHheehhh---hhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHH
Confidence 75 4678999999999999887665 344322 22233444444445555555555444555678999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhh
Q psy14395 416 TVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLR 458 (471)
Q Consensus 416 t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r 458 (471)
.+-...+++.++++||+++++..++|.++++.|+.+|+..+++
T Consensus 267 LTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 267 LTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred HHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 9999999999999999999999999999999999999886544
No 11
>KOG1444|consensus
Probab=99.85 E-value=1.1e-19 Score=179.80 Aligned_cols=281 Identities=15% Similarity=0.152 Sum_probs=223.4
Q ss_pred HHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHh--c-CCCCCCCchhhhHhHHHHHhhhHHH
Q psy14395 123 YLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLII--N-QPRHTVPLYKYGFCSFTNIMSSWCQ 199 (471)
Q Consensus 123 ~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~--~-~~~~~~p~~~~~~~s~~~~~~~~~~ 199 (471)
-+.-.+.|+.+.+. .+|+...++...|.+.+.+...+.-..+ + ++-+....+++.|+++.+.++...+
T Consensus 24 S~lm~vvNK~vls~---------y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~ 94 (314)
T KOG1444|consen 24 SILMTVVNKIVLSS---------YNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTG 94 (314)
T ss_pred HHHHHHHHHHHHhc---------CCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHc
Confidence 34455667777732 3566666666689877665543221111 1 1222333578999999999999999
Q ss_pred hhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccH
Q psy14395 200 YEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEY 279 (471)
Q Consensus 200 n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~ 279 (471)
-.+++|+++|+++++|...++-+++...++++ +|++.
T Consensus 95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~-------------------------------------------~~~~~ 131 (314)
T KOG1444|consen 95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFG-------------------------------------------KRPSN 131 (314)
T ss_pred cccccccCchHHHHHhhchHHHHHHhHHhhcC-------------------------------------------cCchh
Confidence 99999999999999999999998888888887 99999
Q ss_pred HHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHH
Q psy14395 280 FEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTA 359 (471)
Q Consensus 280 ~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l 359 (471)
..+.++..+.+|.......| .+++..|+.+++.+.+..+....+.|+..+.-+.+.+++|+|.|+++.+...
T Consensus 132 ~v~~Sv~~m~~~s~~~~~~d--------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~ 203 (314)
T KOG1444|consen 132 KVWASVFAMIIGSVAAAFTD--------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLL 203 (314)
T ss_pred hHHHHHHHHHHHHHhhcccc--------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHH
Confidence 99999999999988766544 3467779999999999999999998888777788999999999999998888
Q ss_pred HHHHHhcchhhhhhhhh---cCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcch
Q psy14395 360 VSLLQQGGFYQSLHFML---QFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISL 436 (471)
Q Consensus 360 ~~li~~g~l~~~~~f~~---~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~ 436 (471)
...+..||+. +.++.. ..+.++..+.+.++++..-.++.+++.+..||+|.++++..-+..+.+..++.+++++++
T Consensus 204 ~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~ 282 (314)
T KOG1444|consen 204 ILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTF 282 (314)
T ss_pred HHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceech
Confidence 7777888865 433321 224456667788899999999999999999999999999666666667777777789999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy14395 437 LGILGILMVLMAVLLQAYCKLRKASLKK 464 (471)
Q Consensus 437 ~~~iG~~lV~~Gv~l~~~~k~r~k~~~~ 464 (471)
.+.+|+.+-+.|-.+|++.+.|+|+.++
T Consensus 283 ~n~~gll~~~~ggv~Y~~~~~~~k~~~~ 310 (314)
T KOG1444|consen 283 LNVIGLLVGFFGGVLYSYATFRKKKQPP 310 (314)
T ss_pred hhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence 9999999999999999999887776655
No 12
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.84 E-value=5.9e-18 Score=174.64 Aligned_cols=295 Identities=12% Similarity=0.119 Sum_probs=192.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCch--
Q psy14395 108 DALLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIINQ--PRHTVPLY-- 183 (471)
Q Consensus 108 ~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~~--~~~~~p~~-- 183 (471)
|..+.-.....++.+|..+.++-+..++.-. + |..+.+.+..++.+....+...++| ++++.+++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~-------~----~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~ 78 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGL-------N----IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSIL 78 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCC-------C----ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHH
Confidence 3444555566777888888777666664321 2 2235678877777666555444332 22322332
Q ss_pred -hhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHH
Q psy14395 184 -KYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILA 262 (471)
Q Consensus 184 -~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~ 262 (471)
.++..++.......+. +.+++|+++....++-++.|++
T Consensus 79 ~~l~l~g~~g~~~~~~~-----------------------------------------~~gl~~tsa~~asll~~~~P~~ 117 (358)
T PLN00411 79 SKIGLLGFLGSMYVITG-----------------------------------------YIGIEYSNPTLASAISNITPAL 117 (358)
T ss_pred HHHHHHHHHHHHHHHHH-----------------------------------------HHHHhhccHHHHHHHHHhhHHH
Confidence 2333333322122222 3466667777777777888888
Q ss_pred HHHHHHHh------hCCCccccHHHHHHHHHHHHHhHHHhccCCCc--------------C---CCCCCcchhhHHHHHH
Q psy14395 263 VMFMGKLV------SAKPKSYEYFEYISALVISLGMLLFMLSSLDT--------------S---DKVGKTTTLSGVILLA 319 (471)
Q Consensus 263 v~ll~~lf------~~~~krys~~~~lsvili~~GV~lf~~~~~~~--------------~---~~~~~~~~~~G~~lll 319 (471)
++++++++ ++ ||.+.++++++++..+|+.+....++.. . ...+..+...|+++++
T Consensus 118 ~~lla~~~~~e~~~~~--er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l 195 (358)
T PLN00411 118 TFILAIIFRMEKVSFK--ERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLT 195 (358)
T ss_pred HHHHHHHHHhchhhhc--ccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHH
Confidence 88888888 57 9999999999999999999876532210 0 0001112356999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHH-HHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHH
Q psy14395 320 LYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSC-LFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLF 398 (471)
Q Consensus 320 ~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~-i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~ 398 (471)
++.+++|++.+.|++..+++.. .....++...++. +...+.+..+++-...+ ....... ...++..++++.++..+
T Consensus 196 ~aa~~wa~~~il~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~-~~~i~y~~i~t~lay~l 272 (358)
T PLN00411 196 IQGIFVSVSFILQAHIMSEYPA-AFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW-IIHFDIT-LITIVTMAIITSVYYVI 272 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHcCc-HhHHHHHHHHHHHHHHHHHHHHHccCCcccc-eeccchH-HHHHHHHHHHHHHHHHH
Confidence 9999999999999998776532 2333434333333 33334444443211111 0111122 22344455556677778
Q ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhh
Q psy14395 399 VFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK 459 (471)
Q Consensus 399 if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~ 459 (471)
.++++++.||..+++..++.|++++++|++++||++++.+++|.++++.|+++..+.|+|+
T Consensus 273 w~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 273 HSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 8899999999999999999999999999999999999999999999999999988765554
No 13
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.78 E-value=1.4e-16 Score=155.89 Aligned_cols=192 Identities=14% Similarity=0.060 Sum_probs=146.9
Q ss_pred hhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHH
Q psy14395 243 SALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYL 322 (471)
Q Consensus 243 sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl 322 (471)
|++|++..+..++.++.|+++++++.++.| ||.+++++.++++.++|+.+....+. .+.+..|+.+.+++.
T Consensus 67 a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~--e~~~~~~~~gi~i~~~Gv~li~~~~~-------~~~~~~G~~~~l~a~ 137 (260)
T TIGR00950 67 AVKRLPVGEAALLLYLAPLYVTLLSDLMGK--ERPRKLVLLAAVLGLAGAVLLLSDGN-------LSINPAGLLLGLGSG 137 (260)
T ss_pred HHHhcChhhhHHHHhhhHHHHHHHHHHHcc--CCCcHHHHHHHHHHHHhHHhhccCCc-------ccccHHHHHHHHHHH
Confidence 344444444455556667777777777777 99999999999999999998764321 234578999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHH-HHHHHHHHHH
Q psy14395 323 SCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSIS-SAAGQLFVFF 401 (471)
Q Consensus 323 ~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~-~~lgq~~if~ 401 (471)
++.+.++..+|+..++++.++..+..+...++.++..+.....++.. ..++..+..++..+++ +.+++.+.++
T Consensus 138 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (260)
T TIGR00950 138 ISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP------QALSLQWGALLYLGLIGTALAYFLWNK 211 (260)
T ss_pred HHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC------CcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987665555555555667777777776655544321 1123334445555554 5778888999
Q ss_pred HHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Q psy14395 402 TIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAV 449 (471)
Q Consensus 402 ~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv 449 (471)
++++.++.+.++...++|+++++++++++||++++.+++|..+++.|+
T Consensus 212 a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 212 GLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999986
No 14
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.77 E-value=2.5e-18 Score=165.73 Aligned_cols=201 Identities=16% Similarity=0.217 Sum_probs=150.7
Q ss_pred cchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcC--------------CC-----CC
Q psy14395 247 ISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTS--------------DK-----VG 307 (471)
Q Consensus 247 is~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~--------------~~-----~~ 307 (471)
+++|.+..+|+++++++|+.++.+.+ ||++..|+++.++++.|+.....+|.+.. +. ..
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~--~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~ 79 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAG--KQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLM 79 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccc--eeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccc
Confidence 68999999999999999999999999 99999999999999999997665543210 00 11
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHH-hcchhhhhhhhhcCchhhHHHH
Q psy14395 308 KTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQ-QGGFYQSLHFMLQFPSFTLDCI 386 (471)
Q Consensus 308 ~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~-~g~l~~~~~f~~~~p~~~~~il 386 (471)
..+.+.|..+.+.++++|++.+++||+.+|+++.+.+.......+++.+........ .++......+...+|... .
T Consensus 80 ~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 156 (222)
T TIGR00803 80 FGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAV---W 156 (222)
T ss_pred cccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHH---H
Confidence 235678999999999999999999999877654433333333333333322222211 122222222333444433 3
Q ss_pred HHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Q psy14395 387 LLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ 452 (471)
Q Consensus 387 l~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~ 452 (471)
...++++.++.++.+++++.|+.+.++++++||+++.++|+++|||+++..+|+|+.+|+.|+++|
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 344667889999999999999999999999999999999999999999999999999999998764
No 15
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.76 E-value=9.4e-16 Score=154.19 Aligned_cols=193 Identities=11% Similarity=0.018 Sum_probs=142.7
Q ss_pred HHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCC-C--CCCcchhhHHHHHHHHHHHHHHH
Q psy14395 252 QVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSD-K--VGKTTTLSGVILLALYLSCDSFT 328 (471)
Q Consensus 252 ~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~-~--~~~~~~~~G~~lll~sl~~dal~ 328 (471)
..++-++.|+++++++++++| ||.++++++++++..+|+.+....+...+. + .+..++..|+++++++.+++|.+
T Consensus 94 a~~l~~~~Pi~~~ll~~~~~~--e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~ 171 (295)
T PRK11689 94 VGMVNYLWPSLTILFAVLFNG--QKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAY 171 (295)
T ss_pred HHHHHHHhHHHHHHHHHHHhc--CCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHH
Confidence 344556788889999998888 999999999999999999887754321100 0 01123456999999999999999
Q ss_pred HHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcCh
Q psy14395 329 SNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGA 408 (471)
Q Consensus 329 ~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~ga 408 (471)
+++.|+..++ .++...++ ..+.+...+....+++.. ...+++.+..++..++++.+++.+.++.+++.||
T Consensus 172 ~v~~k~~~~~--~~~~~~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a 241 (295)
T PRK11689 172 CNVTRKYARG--KNGITLFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNM 241 (295)
T ss_pred HHHHhhccCC--CCchhHHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCH
Confidence 9999987544 34444322 222222222222233211 1123444555666677788899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 409 IVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 409 lt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
.+.++..++.|+++++++++++||++++.+++|.++++.|+.+....+
T Consensus 242 ~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 242 TLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 999999999999999999999999999999999999999998876544
No 16
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.75 E-value=1.7e-15 Score=152.61 Aligned_cols=203 Identities=9% Similarity=0.118 Sum_probs=144.8
Q ss_pred chhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHH
Q psy14395 248 SFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSF 327 (471)
Q Consensus 248 s~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal 327 (471)
+.....++-++.|+++++++++++| ||.+.++++++++..+|+.+....+. ...+.++.|+.+.+++.++.+.
T Consensus 85 ~a~~a~~l~~~~pi~~~ll~~~~l~--e~~~~~~~~~~~l~~~Gv~ll~~~~~-----~~~~~~~~G~~l~l~aal~~a~ 157 (299)
T PRK11453 85 PAGLASLVLQAQAFFTIVLGAFTFG--ERLQGKQLAGIALAIFGVLVLIEDSL-----NGQHVAMLGFMLTLAAAFSWAC 157 (299)
T ss_pred CHHHHHHHHHhHHHHHHHHHHHHhc--CcCcHHHHHHHHHHHHhHHHhccccC-----CCcchhHHHHHHHHHHHHHHHH
Confidence 3444455556778888888888888 99999999999999999998874321 1123356799999999999999
Q ss_pred HHHHHHHHhhhcC-CCHHHHHHHHHHHHHHHHH-HHHHHhcchhhhhhhhhcCchhhHHHHHHHH-HHHHHHHHHHHHHH
Q psy14395 328 TSNWQGVLFESYK-VTSLQMMFGTNLFSCLFTA-VSLLQQGGFYQSLHFMLQFPSFTLDCILLSI-SSAAGQLFVFFTIY 404 (471)
Q Consensus 328 ~~~~q~~l~~~~~-~s~~~mmf~~~l~s~i~~l-~~li~~g~l~~~~~f~~~~p~~~~~ill~~l-~~~lgq~~if~~i~ 404 (471)
+++.+++..++++ .....+.++....+.+... .....+++..........++..+..++..++ ++.++....++.++
T Consensus 158 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~ 237 (299)
T PRK11453 158 GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLG 237 (299)
T ss_pred HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998755432 2223333333333332222 1122333211100111223445666666665 45567777788999
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhh
Q psy14395 405 KFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL 457 (471)
Q Consensus 405 ~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~ 457 (471)
+.++.+.++...+.|++++++|++++||++++.+++|.++++.|+++..+.++
T Consensus 238 ~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 238 RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999999999999999999998877554
No 17
>KOG1442|consensus
Probab=99.75 E-value=3.5e-19 Score=171.78 Aligned_cols=278 Identities=15% Similarity=0.146 Sum_probs=208.2
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHhcC-CC-CCCCchhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHH
Q psy14395 144 EEGKFRDSQFLVFVNRILALVVSGLSLLIINQ-PR-HTVPLYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILA 221 (471)
Q Consensus 144 ~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~~-~~-~~~p~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ip 221 (471)
.+.....|.|.++.|+++...++.......+. +. .+.|- ++ +++. .++..+|..
T Consensus 54 ~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~--------------------~~-ldl~---t~r~vlpls 109 (347)
T KOG1442|consen 54 LVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPS--------------------LQ-LDLA---TARQVLPLS 109 (347)
T ss_pred hhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCc--------------------cc-ccHH---HHHhhcchh
Confidence 34567789999999999887776544332221 10 01110 01 1111 112223333
Q ss_pred HHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCC
Q psy14395 222 VMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLD 301 (471)
Q Consensus 222 vml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~ 301 (471)
+.....+. ++|.+|+|+.++++.+.|+...+++.++.++++| +|-+..-..++.++..|-.+ +.+.
T Consensus 110 vVfi~mI~---------fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllk--qkTs~~~~~~C~lIi~GF~l---Gvdq 175 (347)
T KOG1442|consen 110 VVFILMIS---------FNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLK--QKTSFFALGCCLLIILGFGL---GVDQ 175 (347)
T ss_pred heeeeehh---------ccceehhhcceEEEEeccchhhhHHHHhHHhhcc--cccccccceeehhheehhee---cccc
Confidence 33333332 3477777777788888888888888888888888 99999999999999999554 3222
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhc-Cch
Q psy14395 302 TSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQ-FPS 380 (471)
Q Consensus 302 ~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~-~p~ 380 (471)
+ ..++..++.|.++.+.+.++-|+-+++.|+.....+-.-|.+.+|+|..+++..+|.++..||+.+-+.|.+. ...
T Consensus 176 E--~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~ 253 (347)
T KOG1442|consen 176 E--GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIK 253 (347)
T ss_pred c--cccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHH
Confidence 1 2346678999999999999999999998876554455679999999999999999999999998765554332 234
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy14395 381 FTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKA 460 (471)
Q Consensus 381 ~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k 460 (471)
+|..+.+.+++++..++...+-|+-++|+|+++.++.|.+...++++.+++|..+..-|-|-.+|+.|...|.+.|+++.
T Consensus 254 Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em 333 (347)
T KOG1442|consen 254 FWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEM 333 (347)
T ss_pred HHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHH
Confidence 56667778899999888888899999999999999999999999999999999999999999999999999999887654
Q ss_pred h
Q psy14395 461 S 461 (471)
Q Consensus 461 ~ 461 (471)
+
T Consensus 334 ~ 334 (347)
T KOG1442|consen 334 R 334 (347)
T ss_pred H
Confidence 3
No 18
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.74 E-value=4.7e-15 Score=148.85 Aligned_cols=250 Identities=15% Similarity=0.088 Sum_probs=169.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCchhhhHhHHHH-HhhhHHHhhhh-cccChhHHHHHhhhhHHHHHHHH
Q psy14395 150 DSQFLVFVNRILALVVSGLSLLIINQPR-HTVPLYKYGFCSFTN-IMSSWCQYEAL-KYISFPAQVLAKSCKILAVMFMG 226 (471)
Q Consensus 150 ~~~fL~~~q~l~~~i~~~~~~~~~~~~~-~~~p~~~~~~~s~~~-~~~~~~~n~aL-~yvs~pt~vl~Ks~k~ipvml~~ 226 (471)
.|..+++.|.+++.+...++...+|++. ++.++......+... .....+.+.+. ++
T Consensus 35 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------------------- 93 (292)
T PRK11272 35 PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQN--------------------- 93 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 3566788898888777655554444322 122222333444332 23344444444 44
Q ss_pred HHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCC
Q psy14395 227 KLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKV 306 (471)
Q Consensus 227 ~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~ 306 (471)
++.....+.-++.|+++++++.+ .| ||.++++++++++..+|+.+...++.
T Consensus 94 --------------------~~a~~a~~l~~~~Pl~~~lla~~-~~--e~~~~~~~~~~~la~~Gv~ll~~~~~------ 144 (292)
T PRK11272 94 --------------------VPSGIAAVVVATVPLFTLCFSRL-FG--IRTRKLEWLGIAIGLAGIVLLNSGGN------ 144 (292)
T ss_pred --------------------CcHHHHHHHHHHHHHHHHHHHHH-hc--ccCchhHHHHHHHHHHhHHHHhcCcc------
Confidence 44444444555677777777765 46 99999999999999999988754321
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHH
Q psy14395 307 GKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCI 386 (471)
Q Consensus 307 ~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~il 386 (471)
.+.+..|+++.+++.+++|.++..+|+..++ ++.....+...++.+.+.+.....++... ...+++.+..++
T Consensus 145 -~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 216 (292)
T PRK11272 145 -LSGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT----ALPTLSGFLALG 216 (292)
T ss_pred -cccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHH
Confidence 1234579999999999999999999886432 22334445555565555554433332110 112233455566
Q ss_pred HHHHH-HHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhh
Q psy14395 387 LLSIS-SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL 457 (471)
Q Consensus 387 l~~l~-~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~ 457 (471)
..++. +.++..+.++.+++.++.+.++...++|+++.++|++++||++++.+++|.++++.|+++.++.++
T Consensus 217 ~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 217 YLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 66654 567888889999999999999999999999999999999999999999999999999988776433
No 19
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.72 E-value=8.4e-15 Score=147.36 Aligned_cols=199 Identities=10% Similarity=0.065 Sum_probs=134.4
Q ss_pred hhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHH
Q psy14395 241 YISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLAL 320 (471)
Q Consensus 241 ~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~ 320 (471)
+.|++|+++....++-.+.|+++++++++++| ||.++++++++++..+|+.+....++ +.. .+.++
T Consensus 91 ~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~--E~~~~~~~~g~~l~~~Gv~li~~~~~--------~~~----~~~l~ 156 (296)
T PRK15430 91 IWAVNNHHMLEASLGYFINPLVNIVLGMIFLG--ERFRRMQWLAVILAICGVLVQLWTFG--------SLP----IIALG 156 (296)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHcC--------Ccc----HHHHH
Confidence 34444555555555556667777777777777 99999999999999999998763221 111 34667
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchh-hHHHHHHHHHHHHHHHHH
Q psy14395 321 YLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSF-TLDCILLSISSAAGQLFV 399 (471)
Q Consensus 321 sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~-~~~ill~~l~~~lgq~~i 399 (471)
+.+++|++.+.+|+..++...+......+..+++.+...+ ...... ......|.. +..++..++.+.+++.+.
T Consensus 157 aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~g~~t~i~~~~~ 230 (296)
T PRK15430 157 LAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA--IADSST----SHMGQNPMSLNLLLIAAGIVTTVPLLCF 230 (296)
T ss_pred HHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH--HccCCc----ccccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999998888753211112222222222232222111 111110 101122222 233444566788899999
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhh
Q psy14395 400 FFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK 459 (471)
Q Consensus 400 f~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~ 459 (471)
++.+++.||.+.++...+.|++++++|++++||++++.+++|.++++.|+.+........
T Consensus 231 ~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~ 290 (296)
T PRK15430 231 TAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT 290 (296)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988877654433
No 20
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.71 E-value=2.6e-16 Score=148.06 Aligned_cols=293 Identities=12% Similarity=0.135 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhcceecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCchhhhHh
Q psy14395 110 LLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIIN-QPRHTVPLYKYGFC 188 (471)
Q Consensus 110 l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~-~~~~~~p~~~~~~~ 188 (471)
-.+..|...|.. -+.++.+... ..|.--..+.++|.+.+.+-..+ +.+-| -.-|..+.++|.++
T Consensus 10 ~~lsYc~sSIlm-----TltNKyVls~---------~gfnMnflll~vQSlvcvv~l~i-Lk~l~~~~fR~t~aK~Wfpi 74 (309)
T COG5070 10 ASLSYCFSSILM-----TLTNKYVLSN---------LGFNMNFLLLAVQSLVCVVGLLI-LKFLRLVEFRLTKAKKWFPI 74 (309)
T ss_pred HHHHHHHHHHHH-----HHhhHheecC---------CCCchhhHHHHHHHHHHHHHHHH-HHHHhHhheehhhhhhhcCH
Confidence 345556554433 3445555521 34555557788898776554333 33222 12223445678899
Q ss_pred HHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHH
Q psy14395 189 SFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGK 268 (471)
Q Consensus 189 s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~ 268 (471)
|+.-+.....+..||+|+++|.++++|...+|-+.....++++
T Consensus 75 SfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fg------------------------------------- 117 (309)
T COG5070 75 SFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFG------------------------------------- 117 (309)
T ss_pred HHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhc-------------------------------------
Confidence 9999999999999999999999999999999999988888888
Q ss_pred HhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHH
Q psy14395 269 LVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMF 348 (471)
Q Consensus 269 lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf 348 (471)
+|.+..+..+.+++++.-.....+|.+.. ......-..|..++..+.+..+.+-...++..+-.+..-++.||
T Consensus 118 ------g~vtsl~l~SFilMvlSS~va~w~D~q~~-~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmf 190 (309)
T COG5070 118 ------GRVTSLELLSFILMVLSSVVATWGDQQAS-AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMF 190 (309)
T ss_pred ------CccchhhHHHHHHHHHHHHHhccchhhHH-HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHH
Confidence 99999999999999999888887775322 11111223588888888887776654444433333456789999
Q ss_pred HHHHHHHHHHHHHHHHhcchhhhhhhh-hcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q psy14395 349 GTNLFSCLFTAVSLLQQGGFYQSLHFM-LQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSC 427 (471)
Q Consensus 349 ~~~l~s~i~~l~~li~~g~l~~~~~f~-~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSv 427 (471)
|.|+.+.++++...+...|.. .-+.. .-.++....++..++|+..-.++.-++++.+++.+.++++.+.|.-..+.|.
T Consensus 191 YnNllslPiL~~~s~~~edws-~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGl 269 (309)
T COG5070 191 YNNLLSLPILLSFSFLFEDWS-PGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGL 269 (309)
T ss_pred HhhhHHHHHHHHHHHHhccCC-cchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhh
Confidence 999999988765543333321 11111 1123445567778888877777788999999999999999999999999999
Q ss_pred HHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhhhh
Q psy14395 428 IIYAHPISLLGILGILMVLMAVLLQAYCKLRKASL 462 (471)
Q Consensus 428 llFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~~ 462 (471)
+.|++|.+...+..+.+-+....+|.+.|.+|+++
T Consensus 270 vffdap~nf~si~sillGflsg~iYavaks~k~q~ 304 (309)
T COG5070 270 VFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304 (309)
T ss_pred hhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999987654443
No 21
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.71 E-value=2e-14 Score=144.43 Aligned_cols=243 Identities=12% Similarity=0.047 Sum_probs=159.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHh
Q psy14395 151 SQFLVFVNRILALVVSGLSLLIINQPRHTVPLYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVS 230 (471)
Q Consensus 151 ~~fL~~~q~l~~~i~~~~~~~~~~~~~~~~p~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~ 230 (471)
|..+.+.|.+++.+...+....++++.++..++.....++.......+.+.+++|++.....+...+.|+.
T Consensus 40 ~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~--------- 110 (293)
T PRK10532 40 APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLA--------- 110 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH---------
Confidence 34578888888876654443222221222223344556666666677777777777665544444444444
Q ss_pred cCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcc
Q psy14395 231 AKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTT 310 (471)
Q Consensus 231 ~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~ 310 (471)
+++++ + ||... ...+.+..+|+.+....+.+ ..+.
T Consensus 111 --------------------------------~~ll~----~--~~~~~--~~~~~i~~~Gv~li~~~~~~-----~~~~ 145 (293)
T PRK10532 111 --------------------------------VALFS----S--RRPVD--FVWVVLAVLGLWFLLPLGQD-----VSHV 145 (293)
T ss_pred --------------------------------HHHHh----c--CChHH--HHHHHHHHHHHheeeecCCC-----cccC
Confidence 43333 1 44443 34456678888776532211 1223
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHH
Q psy14395 311 TLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSI 390 (471)
Q Consensus 311 ~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l 390 (471)
+..|+++.+++.+++|.+.+..|+..+++ ++..+ .+...++.+...+....++.. ...++..+..++..++
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv 216 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAI 216 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHH
Confidence 56799999999999999999998876543 44444 344566665555554443220 0122233333455665
Q ss_pred H-HHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 391 S-SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 391 ~-~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
. +.+++...++.+++.+|...++...+.|++++++|++++||++++.|++|.++++.|+..+.+..
T Consensus 217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 4 55666677899999999999999999999999999999999999999999999999999987654
No 22
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.67 E-value=9e-15 Score=143.46 Aligned_cols=218 Identities=21% Similarity=0.271 Sum_probs=173.2
Q ss_pred chhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHH
Q psy14395 182 LYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKIL 261 (471)
Q Consensus 182 ~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi 261 (471)
..+++++++.+...+.+.+.++++++-+++++.+.+|++.+.++++++.+
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~------------------------------ 66 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLK------------------------------ 66 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHH------------------------------
Confidence 46889999999999999999999999999999899998888888887777
Q ss_pred HHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCC---CC------CCcchhhHHHHHHHHHHHHHHHHHHH
Q psy14395 262 AVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSD---KV------GKTTTLSGVILLALYLSCDSFTSNWQ 332 (471)
Q Consensus 262 ~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~---~~------~~~~~~~G~~lll~sl~~dal~~~~q 332 (471)
||.+.+||+++.++++|+.+...++....+ +. +......|+.+++.+.++.|+.+++.
T Consensus 67 -------------r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~ 133 (244)
T PF04142_consen 67 -------------RRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYF 133 (244)
T ss_pred -------------cccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998776543310 11 12345789999999999999999999
Q ss_pred HHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHh-cchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHH
Q psy14395 333 GVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQ-GGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVF 411 (471)
Q Consensus 333 ~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~-g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~ 411 (471)
|+++|+.+.+.+........+|.++.++..... ++-...-.++..... ......+..++|.+.+-..+++.+...-
T Consensus 134 E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~---~~~~~i~~~a~gGllva~v~KyadnI~K 210 (244)
T PF04142_consen 134 EKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSW---WVWIVIFLQAIGGLLVAFVLKYADNIVK 210 (244)
T ss_pred HHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcch---HHHHHHHHHHHhhHHHHHHHHHHhHHHH
Confidence 999999888888777778888888877665433 221111112222211 1223344566777888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHH
Q psy14395 412 TIIMTVRQGLAILLSCIIYAHPISLLGILGILMV 445 (471)
Q Consensus 412 sii~t~rkv~sillSvllFge~lt~~~~iG~~lV 445 (471)
+..+.+.-+++.++|+++||.++|....+|..+|
T Consensus 211 ~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 211 GFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 9999999999999999999999999999998764
No 23
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.64 E-value=4.5e-15 Score=134.02 Aligned_cols=141 Identities=23% Similarity=0.329 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHHHhcchh--hhhhhhhc-----Cchh
Q psy14395 314 GVILLALYLSCDSFTSNWQGVLFES-----YKVTSLQMMFGTNLFSCLFTAVSLLQQGGFY--QSLHFMLQ-----FPSF 381 (471)
Q Consensus 314 G~~lll~sl~~dal~~~~q~~l~~~-----~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~--~~~~f~~~-----~p~~ 381 (471)
|+++++.|.++.|++++++|+++++ .+.++.++++|+++.++++++|..+..++.. +....... .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7889999999999999999999988 5899999999999999999888765443322 11110111 2355
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 382 TLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 382 ~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
+..++..++++++.|+..+.+++++||+++++.+++|+++++++|+++|||++|+.+++|+++.+.|..+|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6667777889999999999999999999999999999999999999999999999999999999999999875
No 24
>KOG2234|consensus
Probab=99.63 E-value=1.8e-13 Score=137.77 Aligned_cols=231 Identities=17% Similarity=0.270 Sum_probs=176.0
Q ss_pred hhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHH
Q psy14395 183 YKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILA 262 (471)
Q Consensus 183 ~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~ 262 (471)
.+.+++++.+...+-+++.++.+++-.|+++.-..|+..+.++..++.+
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~------------------------------- 141 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILR------------------------------- 141 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHh-------------------------------
Confidence 4667777888887777777777777667777666666666666666555
Q ss_pred HHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCC---CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy14395 263 VMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSD---KVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESY 339 (471)
Q Consensus 263 v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~---~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~ 339 (471)
||.+++||.+.++..+|+.+......++.+ .....+++.|...++.+.+.+|+.+++-|+++|+-
T Consensus 142 ------------rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s 209 (345)
T KOG2234|consen 142 ------------RKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS 209 (345)
T ss_pred ------------hhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999998843332221 23355788999999999999999999999999988
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHh-cchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHH
Q psy14395 340 KVTSLQMMFGTNLFSCLFTAVSLLQQ-GGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVR 418 (471)
Q Consensus 340 ~~s~~~mmf~~~l~s~i~~l~~li~~-g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~r 418 (471)
+.+.|-.......+|.++.+..++.+ ++-...-.++..|....|. ..+..++|.+.+-..+++-+...-.-...+-
T Consensus 210 ~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~---vVl~~a~gGLlvs~v~KyADnIlK~f~~s~a 286 (345)
T KOG2234|consen 210 NVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWL---VVLLNAVGGLLVSLVMKYADNILKGFSTSVA 286 (345)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHH---HHHHHhccchhHHHHHHHhHHHHHHHHHHHH
Confidence 88887777777888888887776554 2211112234444433322 2334556667777788888998888888889
Q ss_pred HHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhh
Q psy14395 419 QGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK 459 (471)
Q Consensus 419 kv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~ 459 (471)
-+++.++|+.+|++++|....+|+.+|+..+.+|...+++.
T Consensus 287 iilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 287 IILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 99999999999999999999999999999999999666554
No 25
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.57 E-value=5.4e-13 Score=133.13 Aligned_cols=190 Identities=12% Similarity=0.094 Sum_probs=127.8
Q ss_pred ccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHH
Q psy14395 246 YISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCD 325 (471)
Q Consensus 246 yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~d 325 (471)
+.+......+-...|+++++++++++| ||.+++++++++++..|+.+....+. ...+..|+.+.+++.+++
T Consensus 86 ~~~~~~~~~l~~~~p~~~~l~~~~~~~--e~~~~~~~~g~~~~~~Gv~ll~~~~~-------~~~~~~g~~~~l~aal~~ 156 (281)
T TIGR03340 86 HADVGLVYPLARSSPLLVAIWATLTLG--ETLSPLAWLGILIITLGLLVLGLSRF-------AQHRRKAYAWALAAALGT 156 (281)
T ss_pred cCChhhhhhHHhhhHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHhcccc-------cccchhHHHHHHHHHHHH
Confidence 333333344444556677777777777 99999999999999999998764331 112346888888899999
Q ss_pred HHHHHHHHHHhhhcCCCHH-HHHHHHHHHHHHHH-HHHHH---HhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHH
Q psy14395 326 SFTSNWQGVLFESYKVTSL-QMMFGTNLFSCLFT-AVSLL---QQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVF 400 (471)
Q Consensus 326 al~~~~q~~l~~~~~~s~~-~mmf~~~l~s~i~~-l~~li---~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if 400 (471)
+.+....|+..++ .++. ....+. .++.+.. .+... ..++.. . .......+..+...++++.+++.+.+
T Consensus 157 a~~~i~~k~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~s~l~~~l~~ 229 (281)
T TIGR03340 157 AIYSLSDKAAALG--VPAFYSALGYL-GIGFLAMGWPFLLLYLKRHGRS--M--FPYARQILPSATLGGLMIGGAYALVL 229 (281)
T ss_pred HHhhhhccccccc--hhcccccHHHH-HHHHHHHHHHHHHHHHHHhccc--h--hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887665322 2221 122221 2222221 22211 111110 0 00111122233444567788899999
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Q psy14395 401 FTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLL 451 (471)
Q Consensus 401 ~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l 451 (471)
+.+++.++.+.+....+.|++++++|++++||+++..+++|.++++.|+.+
T Consensus 230 ~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 230 WAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 999999999999999999999999999999999999999999999999875
No 26
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.57 E-value=7.1e-12 Score=123.22 Aligned_cols=195 Identities=18% Similarity=0.230 Sum_probs=136.9
Q ss_pred hcccchhhHHHHhhhhHHHHHHHHH-HhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHH
Q psy14395 244 ALYISFPAQVLAKSCKILAVMFMGK-LVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYL 322 (471)
Q Consensus 244 L~yis~~~~~i~Ks~~pi~v~ll~~-lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl 322 (471)
++|++.....++.++.|+.+.++++ ++++ ||.+++++.+.++..+|+.+....+.... .. ...|+.+.+++.
T Consensus 91 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~--e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~----~~-~~~g~~~~l~a~ 163 (292)
T COG0697 91 LKYTSASVASLIIGLLPLFTALLAVLLLLG--ERLSLLQILGILLALAGVLLILLGGGGGG----IL-SLLGLLLALAAA 163 (292)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHcc--CCCcHHHHHHHHHHHHhHHheecCCCcch----hH-HHHHHHHHHHHH
Confidence 3344444444444555555555554 4445 99999999999999999999886553211 11 578999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCHHHHHH-HHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHH-HHHHHHH
Q psy14395 323 SCDSFTSNWQGVLFESYKVTSLQMMF-GTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA-AGQLFVF 400 (471)
Q Consensus 323 ~~dal~~~~q~~l~~~~~~s~~~mmf-~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~-lgq~~if 400 (471)
+++|++.+.+|++. +.++....+ +..........+....+.+ .......+..+...++.+. +++.+.+
T Consensus 164 ~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (292)
T COG0697 164 LLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWY 233 (292)
T ss_pred HHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998876 344444444 2222111111111111110 1112223455566666555 6999999
Q ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHh
Q psy14395 401 FTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 401 ~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~ 455 (471)
+.+++.++...++...+.++++++++++++||+++..+++|.++++.|+.+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 234 YALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999988765
No 27
>KOG3912|consensus
Probab=99.47 E-value=9.8e-12 Score=120.99 Aligned_cols=228 Identities=15% Similarity=0.181 Sum_probs=170.5
Q ss_pred hhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHH
Q psy14395 184 KYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAV 263 (471)
Q Consensus 184 ~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v 263 (471)
.+.+.+++....+.+-|.+|.+.+-+..++.|.+-+|+|-+++..+.+
T Consensus 88 lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln-------------------------------- 135 (372)
T KOG3912|consen 88 LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLN-------------------------------- 135 (372)
T ss_pred eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHh--------------------------------
Confidence 345678888888887778877777766666677777777666666555
Q ss_pred HHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCC--CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy14395 264 MFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSD--KVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKV 341 (471)
Q Consensus 264 ~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~--~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~ 341 (471)
++...+||+++..+++|+++....|...++ -.+.+....|+.+++.+-+.-|+.-+++||..+++++
T Consensus 136 -----------~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV 204 (372)
T KOG3912|consen 136 -----------RTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNV 204 (372)
T ss_pred -----------cccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccC
Confidence 999999999999999999998776532210 1123456789999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH-----Hhc---------ch---hhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy14395 342 TSLQMMFGTNLFSCLFTAVSLL-----QQG---------GF---YQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIY 404 (471)
Q Consensus 342 s~~~mmf~~~l~s~i~~l~~li-----~~g---------~l---~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~ 404 (471)
+|.+...+-.+++..++....+ ..| .+ .+.+..+...|.....+....+.-++-|+.-....+
T Consensus 205 ~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk 284 (372)
T KOG3912|consen 205 APLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITK 284 (372)
T ss_pred CHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHH
Confidence 9999999999999755433221 112 11 122333334454333332222333444555556778
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 405 KFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 405 ~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
+.+|.|-.+.-.+|..+..++|..+..|.+...|..|.++...|+++|+-
T Consensus 285 ~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 285 ELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred HhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999863
No 28
>KOG2765|consensus
Probab=99.44 E-value=6.4e-13 Score=133.84 Aligned_cols=223 Identities=13% Similarity=0.145 Sum_probs=176.4
Q ss_pred chhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHH
Q psy14395 236 YEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGV 315 (471)
Q Consensus 236 ~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~ 315 (471)
|++..+.||.|+++.-..+..|..-+++..++.+|.+ +|+++.|.+++.+.+.||++.+.+|.+..+....+....|.
T Consensus 172 anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~--e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~ 249 (416)
T KOG2765|consen 172 ANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPV--ERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGN 249 (416)
T ss_pred HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCc--chhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHH
Confidence 5667889999999999999999999999999999999 99999999999999999999998876443223345568999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHHHhcchh-hhhhhhhcCchhhHHHHHHHHHH
Q psy14395 316 ILLALYLSCDSFTSNWQGVLFESY--KVTSLQMMFGTNLFSCLFTAVSLLQQGGFY-QSLHFMLQFPSFTLDCILLSISS 392 (471)
Q Consensus 316 ~lll~sl~~dal~~~~q~~l~~~~--~~s~~~mmf~~~l~s~i~~l~~li~~g~l~-~~~~f~~~~p~~~~~ill~~l~~ 392 (471)
++.+++++.+|.|.+.-||-..++ +++...+..++.++..++..|.++.-.... +..+ +.+.+++...++...+.+
T Consensus 250 llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~-lP~~~q~~~vv~~~ligt 328 (416)
T KOG2765|consen 250 LLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFE-LPSSTQFSLVVFNNLIGT 328 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCccc-CCCCceeEeeeHhhHHHH
Confidence 999999999999999987766555 578777888888888888877664322111 1111 112222222233334455
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhhh
Q psy14395 393 AAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKAS 461 (471)
Q Consensus 393 ~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~ 461 (471)
.+.-+++-.+.-.++|++.++.+++.--.+++..+++=|++.|+.+++|...|+.|.+..++...-.++
T Consensus 329 vvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~~ 397 (416)
T KOG2765|consen 329 VVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSKK 397 (416)
T ss_pred HHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccccc
Confidence 667777888888899999999999999999999999999999999999999999999988876554433
No 29
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.33 E-value=8.4e-10 Score=111.03 Aligned_cols=179 Identities=14% Similarity=0.162 Sum_probs=126.7
Q ss_pred HHHHHHHHHHhhCCCccccHHH----HHHHHHHHHHhHHHhccCCCcCCCCCC-cchhhHHHHHHHHHHHHHHHHHHHHH
Q psy14395 260 ILAVMFMGKLVSAKPKSYEYFE----YISALVISLGMLLFMLSSLDTSDKVGK-TTTLSGVILLALYLSCDSFTSNWQGV 334 (471)
Q Consensus 260 pi~v~ll~~lf~~~~krys~~~----~lsvili~~GV~lf~~~~~~~~~~~~~-~~~~~G~~lll~sl~~dal~~~~q~~ 334 (471)
++.+++++.+++| |+.+.++ +++++++++|+.+....++++. +++. .+...|+++.+++.++++.+...-|.
T Consensus 97 ~v~~~l~~~~~f~--e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~-~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~ 173 (290)
T TIGR00776 97 LVGGTLFGVIVFG--EWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA-GIKSEFNFKKGILLLLMSTIGYLVYVVVAKA 173 (290)
T ss_pred HHHHHHHHHHHhh--hccchHHHHHHHHHHHHHHHhHheEEecccccc-ccccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3345556666666 9999999 9999999999888765543211 1011 23367999999999999999888875
Q ss_pred HhhhcCCCHHHHHHHHHH----HHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHH-hcChh
Q psy14395 335 LFESYKVTSLQMMFGTNL----FSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIY-KFGAI 409 (471)
Q Consensus 335 l~~~~~~s~~~mmf~~~l----~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~-~~gal 409 (471)
. +.++.+..+.... .+.++..+. ....+ ..++..+..+..++...+++.+.+...+ +.++.
T Consensus 174 ~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~ 239 (290)
T TIGR00776 174 F----GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKP---------LKKYAILLNILPGLMWGIGNFFYLFSAQPKVGVA 239 (290)
T ss_pred c----CCCcceehhHHHHHHHHHHHHHHHHH-hcccc---------hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchh
Confidence 4 3566655333222 222222222 00000 1122333344477777778888888888 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcchhhH----HHHHHHHHHHHHHHHh
Q psy14395 410 VFTIIMTVRQGLAILLSCIIYAHPISLLGI----LGILMVLMAVLLQAYC 455 (471)
Q Consensus 410 t~sii~t~rkv~sillSvllFge~lt~~~~----iG~~lV~~Gv~l~~~~ 455 (471)
+.++..+..++.+.+.|++++||+.++.|+ +|.++++.|+.+....
T Consensus 240 ~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 240 TSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999 9999999999886654
No 30
>KOG2766|consensus
Probab=99.31 E-value=2.6e-13 Score=130.38 Aligned_cols=276 Identities=15% Similarity=0.254 Sum_probs=191.7
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhcce-ecccccccCCcCCCccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchh
Q psy14395 106 KQDALLLLFCTAGLQGSYLTWGVLQEK-IMTQTYTNIMLEEGKFRDSQFLVFVNRILALVVSGLSLLIINQPRHTVPLYK 184 (471)
Q Consensus 106 ~~~~l~l~~~~~gi~~~~l~~gi~qE~-i~~~~y~~~~~~~~~F~~~~fL~~~q~l~~~i~~~~~~~~~~~~~~~~p~~~ 184 (471)
..|.+.+++|..+...+++. || +.. =+..-|++.+ +.+.+.. .++.+ |++--+..|++
T Consensus 22 LGQiLSL~~t~~a~tss~la-----~k~iN~------------Pt~QtFl~Y~--LLalVY~-~~~~f-R~~~~~~~~~h 80 (336)
T KOG2766|consen 22 LGQILSLLITSTAFTSSELA-----RKGINA------------PTSQTFLNYV--LLALVYG-PIMLF-RRKYIKAKWRH 80 (336)
T ss_pred HHHHHHHHHHcchhhhHHHH-----hccCCC------------ccHHHHHHHH--HHHHHHh-hHHHh-hhHHHHHHHHH
Confidence 56778888887776666543 22 211 1112244443 3333333 23333 34455667888
Q ss_pred hhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHH-H
Q psy14395 185 YGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILA-V 263 (471)
Q Consensus 185 ~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~-v 263 (471)
|.+.++..+-++.+--.|.+|.+...- |++ +|.-+| +
T Consensus 81 Yilla~~DVEaNy~vV~AyQyTsmtSi-----------~lL-------------------------------Dcwaip~v 118 (336)
T KOG2766|consen 81 YILLAFVDVEANYFVVKAYQYTSMTSI-----------MLL-------------------------------DCWAIPCV 118 (336)
T ss_pred hhheeEEeecccEEEeeehhhcchHHH-----------HHH-------------------------------HHhhhHHH
Confidence 999999999998888888888775322 222 344444 6
Q ss_pred HHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCH
Q psy14395 264 MFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTS 343 (471)
Q Consensus 264 ~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~ 343 (471)
++++|+|++ .||.+.|+.+++++..|+.+...+|....+..+.+++..|+++++..+-++|..++.+|-+.| |.+.
T Consensus 119 ~~lsw~fLk--trYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk--n~d~ 194 (336)
T KOG2766|consen 119 LVLSWFFLK--TRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK--NADR 194 (336)
T ss_pred HHHHHHHHH--HHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh--cCcH
Confidence 677788887 999999999999999999998877754322334677889999999999999999999998876 5789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHH
Q psy14395 344 LQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAI 423 (471)
Q Consensus 344 ~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~si 423 (471)
.|+|....++|+++..+..+.+..-...+ ++..+.. ..+.++++-++-.-+.=..++..||...++...+..+.++
T Consensus 195 ~elm~~lgLfGaIIsaIQ~i~~~~~~~tl---~w~~~i~-~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl 270 (336)
T KOG2766|consen 195 VELMGFLGLFGAIISAIQFIFERHHVSTL---HWDSAIF-LYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSL 270 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccceeeE---eehHHHH-HHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHH
Confidence 99999999999999988766654322111 1111111 1111333322222222235688899999999999999999
Q ss_pred HHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 424 LLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 424 llSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
++ -.||-+++|...+..+.+..|+++|..
T Consensus 271 ~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 271 LI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred HH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 98 778888999999999999999999854
No 31
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.29 E-value=1.6e-09 Score=106.50 Aligned_cols=216 Identities=12% Similarity=0.089 Sum_probs=133.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC------C---CCC-chhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHH
Q psy14395 151 SQFLVFVNRILALVVSGLSLLIINQPR------H---TVP-LYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKIL 220 (471)
Q Consensus 151 ~~fL~~~q~l~~~i~~~~~~~~~~~~~------~---~~p-~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~i 220 (471)
|..+++.|.+++.+...++...+++++ + +.+ +......++.......+.+.|+++++..
T Consensus 29 ~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~----------- 97 (256)
T TIGR00688 29 ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSL----------- 97 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHH-----------
Confidence 556888999888766554443332210 0 111 1123334444555556666666655544
Q ss_pred HHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCC
Q psy14395 221 AVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSL 300 (471)
Q Consensus 221 pvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~ 300 (471)
+..++-.+.|+++++++++++| ||.++++++++++..+|+++....+.
T Consensus 98 ------------------------------~a~~l~~~~Pi~~~lla~~~l~--Ek~~~~~~l~~~~~~~Gv~li~~~~~ 145 (256)
T TIGR00688 98 ------------------------------EVSLGYLINPLVMVALGRVFLK--ERISRFQFIAVIIATLGVISNIVLKG 145 (256)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444445566666677777777 99999999999999999998754211
Q ss_pred CcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCc-
Q psy14395 301 DTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFP- 379 (471)
Q Consensus 301 ~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p- 379 (471)
+.. .+.+++.++++.+.+.+|+..++ +..++..+ +....++..+.....+.. . . ...++
T Consensus 146 --------~~~----~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~-~-~--~~~~~~ 205 (256)
T TIGR00688 146 --------SLP----WEALVLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQTDFA-T-V--QQTNPF 205 (256)
T ss_pred --------Cch----HHHHHHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHHhccC-c-c--cccCch
Confidence 111 24567889999999998876432 22232221 222222222222221211 0 0 00122
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHH
Q psy14395 380 SFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCII 429 (471)
Q Consensus 380 ~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvll 429 (471)
..|..++..++++.+++.+.++.+++.+|.+.++..++.|+++.++++++
T Consensus 206 ~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 206 PIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 24556667777888999999999999999999999999999999999764
No 32
>KOG4510|consensus
Probab=99.11 E-value=1e-10 Score=113.33 Aligned_cols=211 Identities=12% Similarity=0.153 Sum_probs=157.1
Q ss_pred hhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHh-----ccCCCcCC-CCCCcchh
Q psy14395 239 FEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFM-----LSSLDTSD-KVGKTTTL 312 (471)
Q Consensus 239 ~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~-----~~~~~~~~-~~~~~~~~ 312 (471)
+-+.|++|.|.+-++++.-..|.++.+++|.++| |+++..+.++..+...||++.. .++..+.. +...+.+.
T Consensus 113 lmyya~~~mslaDA~vItFssPvft~ifaw~~Lk--E~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~ 190 (346)
T KOG4510|consen 113 LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLK--EPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI 190 (346)
T ss_pred HHHHHHhhcchhheEEEEecChHHHHHHHHHHHc--CCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence 3467899999999999999999999999999999 9999999999999999999754 33332211 11223456
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHH
Q psy14395 313 SGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISS 392 (471)
Q Consensus 313 ~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~ 392 (471)
.|....+.+.++.|-..+.-+++-| +.+..-.+.|...++++.+++.+..-|++ +. .+...-++..+.+++.+
T Consensus 191 ~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~----~l-P~cgkdr~l~~~lGvfg 263 (346)
T KOG4510|consen 191 PGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAV----QL-PHCGKDRWLFVNLGVFG 263 (346)
T ss_pred CchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhccce----ec-CccccceEEEEEehhhh
Confidence 6777777777776666666666644 34444556677777777777666544532 11 11112234456679999
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhh
Q psy14395 393 AAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLR 458 (471)
Q Consensus 393 ~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r 458 (471)
+++|++.-..+++=-|--.++.+++.-+++.+.-+++|||-.|++.|.|+++|++...+....|..
T Consensus 264 figQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa 329 (346)
T KOG4510|consen 264 FIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA 329 (346)
T ss_pred hHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence 999999988876655555678889999999999999999999999999999999998877765543
No 33
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.07 E-value=3.6e-08 Score=95.29 Aligned_cols=241 Identities=14% Similarity=0.055 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhhHhHHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHHHHHHhcC
Q psy14395 153 FLVFVNRILALVVSGLSLLIINQPRHTVPLYKYGFCSFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFMGKLVSAK 232 (471)
Q Consensus 153 fL~~~q~l~~~i~~~~~~~~~~~~~~~~p~~~~~~~s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~~~l~~~~ 232 (471)
-.+..+..++.+.......-+++...+..+.....-+.+....+.+-|.|++-++..+.+-.--..|+-+.+.+.
T Consensus 42 g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----- 116 (292)
T COG5006 42 GVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----- 116 (292)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc-----
Confidence 356677666655543333323333334445555666778888899999999999987776666666665555421
Q ss_pred CccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchh
Q psy14395 233 PKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTL 312 (471)
Q Consensus 233 ~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~ 312 (471)
|| .++.+.+.+.+.|+.+..-.. .+..+-+.
T Consensus 117 ------------------------------------------Rr--~~d~vwvaLAvlGi~lL~p~~-----~~~~~lDp 147 (292)
T COG5006 117 ------------------------------------------RR--LRDFVWVALAVLGIWLLLPLG-----QSVWSLDP 147 (292)
T ss_pred ------------------------------------------cc--hhhHHHHHHHHHHHHhheecc-----CCcCcCCH
Confidence 33 456666677788877765322 22355678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHH
Q psy14395 313 SGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISS 392 (471)
Q Consensus 313 ~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~ 392 (471)
.|..+.+.+..|++.|-+.-+|.-+ ..+..+-+..-..++.++.+|.-+.+... ...+|+....-+..++++
T Consensus 148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~------~l~~p~ll~laLgvavlS 219 (292)
T COG5006 148 VGVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGP------ALFSPSLLPLALGVAVLS 219 (292)
T ss_pred HHHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcch------hhcChHHHHHHHHHHHHh
Confidence 9999999999999999888777653 23334444444556666666654433211 124566655556666665
Q ss_pred HH-HHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHh
Q psy14395 393 AA-GQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 393 ~l-gq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~ 455 (471)
.. -...-...+++.++-++++.+.++|.+.-+.+++++||.+|+.||+|++.|+.+..-..+.
T Consensus 220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence 44 4444567899999999999999999999999999999999999999999999987755554
No 34
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.06 E-value=5.8e-07 Score=88.89 Aligned_cols=184 Identities=16% Similarity=0.166 Sum_probs=141.3
Q ss_pred hHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14395 259 KILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFES 338 (471)
Q Consensus 259 ~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~ 338 (471)
.|+..+++|.+|+| ||.++.|++++++..+||..-+... .+.++..+.+.+. +++|+...|+
T Consensus 108 nPL~~VllG~lflk--Erls~~Q~iAV~lA~~GV~~~~~~~--------g~lpwval~la~s----f~~Ygl~RK~---- 169 (293)
T COG2962 108 NPLVNVLLGRLFLK--ERLSRLQWIAVGLAAAGVLIQTWLL--------GSLPWVALALALS----FGLYGLLRKK---- 169 (293)
T ss_pred HHHHHHHHHHHHHH--hhccHHHHHHHHHHHHHHHHHHHHc--------CCCcHHHHHHHHH----HHHHHHHHHh----
Confidence 57888899999999 9999999999999999999877643 3466766666543 3666655544
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhh-cCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHH
Q psy14395 339 YKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFML-QFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTV 417 (471)
Q Consensus 339 ~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~-~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~ 417 (471)
.++++.+-+.--.++-.+..+..++..++-.+ +.. +++..+..+++.|..+++.-...-.+-++.+=.+..+....
T Consensus 170 ~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi 246 (293)
T COG2962 170 LKVDALTGLTLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYI 246 (293)
T ss_pred cCCchHHhHHHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 36777766666555555555555544332211 333 45555666777788888887777788899999999999999
Q ss_pred HHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhhhhh
Q psy14395 418 RQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKASLK 463 (471)
Q Consensus 418 rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~~~ 463 (471)
.|....++++++|||+++..+++..+++-.|+.++....-++++++
T Consensus 247 ~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~~ 292 (293)
T COG2962 247 EPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARKK 292 (293)
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999998877655543
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.74 E-value=1.1e-07 Score=81.65 Aligned_cols=123 Identities=20% Similarity=0.289 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHH-HHHHHHHHHHH
Q psy14395 324 CDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSIS-SAAGQLFVFFT 402 (471)
Q Consensus 324 ~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~-~~lgq~~if~~ 402 (471)
++|.+....|+..++ .++.+..++....+.+ .++.....+... ....++..+...+..++. +.+++.+.+++
T Consensus 2 ~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 74 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYA 74 (126)
T ss_pred eeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHH
Confidence 456777888887654 7899999999988887 554443332211 112233334445555544 68889999999
Q ss_pred HHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Q psy14395 403 IYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA 453 (471)
Q Consensus 403 i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~ 453 (471)
+++.++...++...+.|+++.++++++++|++++.+++|+.+++.|+.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 75 LKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988754
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.64 E-value=1.9e-07 Score=81.56 Aligned_cols=132 Identities=20% Similarity=0.197 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHH
Q psy14395 315 VILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAA 394 (471)
Q Consensus 315 ~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~l 394 (471)
.++.++++++.|++.++.|.=.+ ++||.--.+.-+....+++...+...|+....-+ -.|..|..+.+.++.+.+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~---~~~k~~lflilSGla~gl 79 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE---IGPKSWLFLILSGLAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccc---cCcceehhhhHHHHHHHH
Confidence 46778899999999888865433 4666666666677777777777777776532211 356677888889999999
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Q psy14395 395 GQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLL 451 (471)
Q Consensus 395 gq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l 451 (471)
+-++.|+++++-.+...+.+.-+.+++++++|++++||++|..+|+|+.++..|..+
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail 136 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL 136 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence 999999999999999999999999999999999999999999999999999999764
No 37
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.52 E-value=6.2e-06 Score=83.09 Aligned_cols=140 Identities=14% Similarity=0.183 Sum_probs=106.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHH
Q psy14395 310 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS 389 (471)
Q Consensus 310 ~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~ 389 (471)
....|.++++++.++.|......|.. .+.++.++.++-..++.++.++.....++..+.... .+++..+...+..+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~---~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI---YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHHH
Confidence 34579999999999999999888643 358999999999999988776665444432111110 11222222223334
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Q psy14395 390 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA 453 (471)
Q Consensus 390 l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~ 453 (471)
+.....+.+.++.+++.++...++...+.|+++.++++++++|+++..+|+|+++.+.|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 4555678888999999999999999999999999999999999999999999999999987654
No 38
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.51 E-value=6e-06 Score=81.12 Aligned_cols=138 Identities=9% Similarity=0.148 Sum_probs=106.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhc--CchhhHHHHHHHH
Q psy14395 313 SGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQ--FPSFTLDCILLSI 390 (471)
Q Consensus 313 ~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~--~p~~~~~ill~~l 390 (471)
.|..+++++.++.|......|.+ . +.++.++.++-.+++.++..+.+...++..+..+.... ..+.+..+...++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 38889999999999999998763 2 48999999999999987776655444432111111111 1112233455566
Q ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Q psy14395 391 SSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA 453 (471)
Q Consensus 391 ~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~ 453 (471)
+....+.+.++++++.++.+.++...+-|+++.+++.++++|+++..+|+|+++.+.|+.+-.
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 667788889999999999999999999999999999999999999999999999999987653
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.26 E-value=0.00018 Score=71.49 Aligned_cols=175 Identities=13% Similarity=0.158 Sum_probs=118.6
Q ss_pred HHHHHHHHHhhCCCccccHHHHH----HHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Q psy14395 261 LAVMFMGKLVSAKPKSYEYFEYI----SALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLF 336 (471)
Q Consensus 261 i~v~ll~~lf~~~~krys~~~~l----svili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~ 336 (471)
+.+.+.+.++++ |.-+..+++ +++++++|+.+.+..|.++++.++..+..-|+..++++.+.+..|....+-
T Consensus 84 vg~sl~gv~~fg--EW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~-- 159 (269)
T PF06800_consen 84 VGTSLIGVLFFG--EWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA-- 159 (269)
T ss_pred HHHHHHHHhhcC--CCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--
Confidence 445566666666 877766654 888999999998887754331123345567999999999999888888643
Q ss_pred hhcCCCHHHHHHHHHHHHHHHH-HHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHH
Q psy14395 337 ESYKVTSLQMMFGTNLFSCLFT-AVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIM 415 (471)
Q Consensus 337 ~~~~~s~~~mmf~~~l~s~i~~-l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~ 415 (471)
.+.++++..+=.. ++.... +.......+. ..+... +.-++.++.=.+++++.+...++.|..+.=..+
T Consensus 160 --~~~~~~~~~lPqa-iGm~i~a~i~~~~~~~~-------~~~k~~-~~nil~G~~w~ignl~~~is~~~~G~a~af~lS 228 (269)
T PF06800_consen 160 --FHVSGWSAFLPQA-IGMLIGAFIFNLFSKKP-------FFEKKS-WKNILTGLIWGIGNLFYLISAQKNGVATAFTLS 228 (269)
T ss_pred --cCCChhHhHHHHH-HHHHHHHHHHhhccccc-------ccccch-HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHH
Confidence 3578877766332 232222 2222222110 011122 223445666678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCcchhh----HHHHHHHHHHHH
Q psy14395 416 TVRQGLAILLSCIIYAHPISLLG----ILGILMVLMAVL 450 (471)
Q Consensus 416 t~rkv~sillSvllFge~lt~~~----~iG~~lV~~Gv~ 450 (471)
.+-.+++.+.|++++||.=+..+ ++|.++++.|..
T Consensus 229 Q~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 229 QLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred hHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 99999999999999999877654 457777777654
No 40
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.16 E-value=5e-05 Score=75.79 Aligned_cols=133 Identities=11% Similarity=0.001 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHH
Q psy14395 315 VILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAA 394 (471)
Q Consensus 315 ~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~l 394 (471)
+.+.+++.++.+......|+..++ .++. .++....+.+...|........ ..+ ...+.+.+..++..++....
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 75 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQ-VGW--SRLPATFWLLLAISAVANMV 75 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhccc-CCC--CCcchhhHHHHHHHHHHHHH
Confidence 456678888889988888766543 2233 3555555665655554432100 001 11112233344555566778
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 395 GQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 395 gq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
++.+.+..+++.++...+++..+.|+++.+++++++||+++..+|+|+++++.|+.+-..
T Consensus 76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 888999999999999999999999999999999999999999999999999999887653
No 41
>KOG4314|consensus
Probab=98.02 E-value=6.7e-05 Score=70.48 Aligned_cols=208 Identities=13% Similarity=0.116 Sum_probs=139.4
Q ss_pred hhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHH
Q psy14395 237 EYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVI 316 (471)
Q Consensus 237 ~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~ 316 (471)
.++-..||+.+|.+-..-+-+|.--+|-+++++.++ .|+..-+++++++...|+++..+.|.. ...++.|+.
T Consensus 67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~--D~~~~~kIlaailAI~GiVmiay~DN~------~a~e~iGi~ 138 (290)
T KOG4314|consen 67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLG--DRFMGFKILAAILAIGGIVMIAYADNE------HADEIIGIA 138 (290)
T ss_pred CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhc--cchhhhhHHHHHHHhCcEEEEEeccch------hhhhhhhHH
Confidence 344556788888888888889999999999999999 999999999999999999999887753 346799999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC-CHHHHHHHHHHHHHHH-HHHHH--HHhcchhhhhhhhhcCchhhHHHHHHHHHH
Q psy14395 317 LLALYLSCDSFTSNWQGVLFESYKV-TSLQMMFGTNLFSCLF-TAVSL--LQQGGFYQSLHFMLQFPSFTLDCILLSISS 392 (471)
Q Consensus 317 lll~sl~~dal~~~~q~~l~~~~~~-s~~~mmf~~~l~s~i~-~l~~l--i~~g~l~~~~~f~~~~p~~~~~ill~~l~~ 392 (471)
+..+|.++.|+|-+.-|+...+-+. +.-..|....++..++ ..|.+ ..+| .|.++-+...| |..+...+..+
T Consensus 139 ~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~--VE~~qsFA~~P--WG~l~G~A~L~ 214 (290)
T KOG4314|consen 139 CAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTG--VEHLQSFAAAP--WGCLCGAAGLS 214 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhc--hHHHHHHhhCC--chhhhhHHHHH
Confidence 9999999999998888776654333 2222333333333333 23333 2333 12222122222 32233333333
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 393 AAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 393 ~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
..-++.+...+....|+..++-+...--.-.....+.-+-..+.....|..++..|..+.....
T Consensus 215 lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 215 LAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred HHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 3445555566677777777776665554555555555445778888999999999977765543
No 42
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.01 E-value=0.0002 Score=61.74 Aligned_cols=103 Identities=27% Similarity=0.403 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHH-HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHh
Q psy14395 352 LFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA-AGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIY 430 (471)
Q Consensus 352 l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~-lgq~~if~~i~~~galt~sii~t~rkv~sillSvllF 430 (471)
.++.+.........++..+..+...+++. ..++..++++. .+....++.+++.++ ..+.+..+-|+++.++|.++|
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~ 82 (113)
T PF13536_consen 6 LFSVLFLLIILLIRGRLRDLFRALRRKPW--LWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF 82 (113)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence 34555555555555655444343434443 33455566554 667777889999886 777888899999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHhhh
Q psy14395 431 AHPISLLGILGILMVLMAVLLQAYCKL 457 (471)
Q Consensus 431 ge~lt~~~~iG~~lV~~Gv~l~~~~k~ 457 (471)
+|+++..+|+|+++++.|+.+-.+...
T Consensus 83 ~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 83 KERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 999999999999999999998877543
No 43
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.91 E-value=0.00041 Score=72.10 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHH
Q psy14395 314 GVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA 393 (471)
Q Consensus 314 G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~ 393 (471)
-.+.++.--++++-.....|..+ +.++++..+.++-..++.+.+++......... ... ..+...+..+.+.++++.
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~-~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~~~--~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVAT-SKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-SLP--PLSVSILSKIGLLGFLGS 89 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HCCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-ccC--cchHHHHHHHHHHHHHHH
Confidence 34445555666666677777666 46899999999998898888777654432100 000 011122345566677665
Q ss_pred HHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHH------hCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 394 AGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCII------YAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 394 lgq~~if~~i~~~galt~sii~t~rkv~sillSvll------Fge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
+.+.+.+..++.++|...+++.++-|+++.+++.++ ++|+++..+++|+++.+.|+.+-..
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 666678899999999999999999999999999999 6999999999999999999887664
No 44
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.81 E-value=0.00069 Score=67.40 Aligned_cols=141 Identities=13% Similarity=0.171 Sum_probs=111.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHH
Q psy14395 311 TLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSI 390 (471)
Q Consensus 311 ~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l 390 (471)
+.-|+++.+.+-+..|+...+-+-+ .+.++.|+..+--++|.++++..+...++..+..+ ..++|..+..+.+.++
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll---~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~ 80 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL---EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTAL 80 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH---ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHH
Confidence 3469999999999999988887654 25889999999999999998887766655443333 4466765544433333
Q ss_pred HHHHHHHHHH-HHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 391 SSAAGQLFVF-FTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 391 ~~~lgq~~if-~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
. ..+|..+| ++..+-..+-.|.-=..-|.+.++++.++++|+++..||+.+++...|+....+..
T Consensus 81 l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 81 L-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred H-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 2 23566666 78888889999999999999999999999999999999999999999999887754
No 45
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.80 E-value=0.00012 Score=62.47 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCC---chhhhHhHHH-HHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHH
Q psy14395 151 SQFLVFVNRILALVVSGLSLLIINQPR-HTVP---LYKYGFCSFT-NIMSSWCQYEALKYISFPAQVLAKSCKILAVMFM 225 (471)
Q Consensus 151 ~~fL~~~q~l~~~i~~~~~~~~~~~~~-~~~p---~~~~~~~s~~-~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~ 225 (471)
|...++.+.+.+.+ ........++.+ .+.+ +......+.. ...+..+.+.++++++.+.
T Consensus 19 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--------------- 82 (126)
T PF00892_consen 19 PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASI--------------- 82 (126)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhH---------------
Confidence 45567777777776 433333333221 2222 2233344443 4556666666666655443
Q ss_pred HHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHh
Q psy14395 226 GKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFM 296 (471)
Q Consensus 226 ~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~ 296 (471)
..++..+.|+.+++++++++| |+.+++++++++++++|+.+..
T Consensus 83 --------------------------~~~~~~~~pv~~~i~~~~~~~--e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 83 --------------------------VSILQYLSPVFAAILGWLFLG--ERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred --------------------------HHHHHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHH
Confidence 334445556666666666666 9999999999999999998864
No 46
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.78 E-value=0.00044 Score=67.57 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=85.1
Q ss_pred HHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHH-HHHHHHHHHHHHHHHhcC
Q psy14395 329 SNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS-ISSAAGQLFVFFTIYKFG 407 (471)
Q Consensus 329 ~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~-l~~~lgq~~if~~i~~~g 407 (471)
....|...+ ...++.++.++-.+.+.++..+..... .....+...+..+ ++..+.+.+.+.++++.+
T Consensus 5 ~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~ 72 (260)
T TIGR00950 5 GVVIGQYLE-GQVPLYFAVFRRLIFALLLLLPLLRRR-----------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLP 72 (260)
T ss_pred HHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhc-----------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344444433 257888888888888877766543322 1111122333444 445677788899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 408 AIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 408 alt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
+...+++..+.|+++.+++.++++|++++.+++|+.+.+.|+.+...
T Consensus 73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~ 119 (260)
T TIGR00950 73 VGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS 119 (260)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence 99999999999999999999999999999999999999999887653
No 47
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.72 E-value=0.00039 Score=60.00 Aligned_cols=44 Identities=18% Similarity=0.235 Sum_probs=35.4
Q ss_pred HhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCC
Q psy14395 255 AKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSL 300 (471)
Q Consensus 255 ~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~ 300 (471)
+.++.|+++++++++++| ||.+++++++++++++|+++....|.
T Consensus 66 i~~~~pi~~~ll~~~~~~--er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 66 IFSLSPIFTALLSWLFFK--ERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 334556666666666666 99999999999999999999988764
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.65 E-value=0.0016 Score=58.04 Aligned_cols=65 Identities=15% Similarity=0.179 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHH--HhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 390 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCI--IYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 390 l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvl--lFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
++..++.++..+.+++.+...+....+.-.+...++++. +|||++|+.+++|+++++.|+.+-+.
T Consensus 56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 345556677889999999999888888877777777875 89999999999999999999998664
No 49
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.63 E-value=0.0009 Score=67.67 Aligned_cols=128 Identities=13% Similarity=0.045 Sum_probs=96.1
Q ss_pred HHHHHHHHHhhhcCCC--HHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy14395 327 FTSNWQGVLFESYKVT--SLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIY 404 (471)
Q Consensus 327 l~~~~q~~l~~~~~~s--~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~ 404 (471)
.++..||++.++...+ +.-+.+.......+...+.....+. ..... ..+...+..+++..++..+.+.+++
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~al~ 86 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-----PKSRK--IPLKKYAILSFLFFLASVLSNAALK 86 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-----cCCCc--ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899998865444 6666666666666555554443330 00111 1234556667788888888899999
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhhhh
Q psy14395 405 KFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRKAS 461 (471)
Q Consensus 405 ~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~ 461 (471)
..+-.+..+.-..+++.++++++++++++.+..++++++++..|+.+....+.+.++
T Consensus 87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~ 143 (303)
T PF08449_consen 87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS 143 (303)
T ss_pred hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence 999999999999999999999999999999999999999999999998887654443
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.59 E-value=0.0029 Score=63.53 Aligned_cols=127 Identities=17% Similarity=0.070 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHH-HHHH
Q psy14395 318 LALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISS-AAGQ 396 (471)
Q Consensus 318 ll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~-~lgq 396 (471)
.+.-.+.+|...+..|.... +++|.+..++-..++.++.++....++.-. ...+.+......+++. ..++
T Consensus 13 ~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 13 LFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPL-------PTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-------CcHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777765543 689999999999999888777655443210 0112233344455443 3456
Q ss_pred HHHHHHH-HhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 397 LFVFFTI-YKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 397 ~~if~~i-~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
.+.+... ++.++...++...+-|+++.+++.+ ++|+++..+|+|..+.+.|+.+-..
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~ 141 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS 141 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence 6667777 8888888999999999999999985 7999999999999999999877643
No 51
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.57 E-value=0.00045 Score=70.05 Aligned_cols=199 Identities=11% Similarity=0.171 Sum_probs=103.0
Q ss_pred hhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcch--------
Q psy14395 240 EYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTT-------- 311 (471)
Q Consensus 240 ~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~-------- 311 (471)
+..|+.+.+.+...-.-+...+..++++..++| ||.+++++.++.++++|..+.....+++. +..+...
T Consensus 67 ~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~--e~~~~~~~~G~~l~i~G~~liv~~~~~~~-~~~t~~~l~~~~~~~ 143 (300)
T PF05653_consen 67 NFVALGFAPASLVAPLGALSLVFNAVLARFFLG--EKLTRRDIVGCALIILGSVLIVIFAPKEE-PIHTLDELIALLSQP 143 (300)
T ss_pred HHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhc--ccchHhHHhhHHHHHhhheeeEEeCCCCC-CcCCHHHHHHHhcCc
Confidence 444555555554454556777889999999999 99999999999999999988765544322 1000000
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHH-----------HHhcchhhhhhhhhcCc
Q psy14395 312 -LSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSL-----------LQQGGFYQSLHFMLQFP 379 (471)
Q Consensus 312 -~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~l-----------i~~g~l~~~~~f~~~~p 379 (471)
...+........+ .+.....+ +++ ..+++.|..+.+.+-..-.+ ..+|+ + ...||
T Consensus 144 ~fl~y~~~~~~~~~-~L~~~~~~----r~g--~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~-----~-~f~~~ 210 (300)
T PF05653_consen 144 GFLVYFILVLVLIL-ILIFFIKP----RYG--RRNILVYISICSLIGSFTVLSAKAISILIKLTFSGD-----N-QFTYP 210 (300)
T ss_pred ceehhHHHHHHHHH-HHHHhhcc----hhc--ccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc-----h-hhhhh
Confidence 1111111111111 11111111 211 11122233322211111110 11121 1 12445
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH-HHHHHHHHHHHHHHHHhCC--Ccchhh----HHHHHHHHHHHHHH
Q psy14395 380 SFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTI-IMTVRQGLAILLSCIIYAH--PISLLG----ILGILMVLMAVLLQ 452 (471)
Q Consensus 380 ~~~~~ill~~l~~~lgq~~if~~i~~~galt~si-i~t~rkv~sillSvllFge--~lt~~~----~iG~~lV~~Gv~l~ 452 (471)
..+..++....+......+...+++++++..... .-..=...+++-|.++|+| ..++.+ ..|..+++.|+++-
T Consensus 211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL 290 (300)
T PF05653_consen 211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL 290 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence 5444444444443444445567999998753222 2222234788889999997 566644 45677788888775
Q ss_pred HH
Q psy14395 453 AY 454 (471)
Q Consensus 453 ~~ 454 (471)
+.
T Consensus 291 ~~ 292 (300)
T PF05653_consen 291 SS 292 (300)
T ss_pred ec
Confidence 44
No 52
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.56 E-value=0.0032 Score=65.21 Aligned_cols=139 Identities=9% Similarity=0.065 Sum_probs=99.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-HHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHH
Q psy14395 311 TLSGVILLALYLSCDSFTSNWQGVLFESYKVT-SLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS 389 (471)
Q Consensus 311 ~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s-~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~ 389 (471)
++.-..+.+..-.+........|.+++. .+ |+.+...-..++.++..+.. ..+. .+..+ .......+..++..+
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~-~~~~-~~~~~-~~~~~~~~~~llp~g 121 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYW-ATGF-RKIPR-IKSLKLFLKNFLPQG 121 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHH-HhCC-CCCCC-CCCHHHHHHHHHHHH
Confidence 3444444555555666777888888875 45 78887777777766544332 1121 10000 000112345677788
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 390 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 390 l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
+++..++...+.+++..++....++..+.|+++++++.++++|+++..+++|++++++|+.+-..
T Consensus 122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 88887777777889999999999999999999999999999999999999999999999887653
No 53
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.48 E-value=0.0042 Score=62.51 Aligned_cols=125 Identities=11% Similarity=0.103 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHH
Q psy14395 323 SCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFT 402 (471)
Q Consensus 323 ~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~ 402 (471)
++....+.++|..++.. ..|..+.+.-..++.+...+. ...+.. +. .....+.+..++..+++....+.+.+..
T Consensus 12 ~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~-~~~~~~-~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 85 (302)
T TIGR00817 12 FLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLS-WSSGLP-KR---LKISSALLKLLLPVAIVHTIGHVTSNVS 85 (302)
T ss_pred HHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHH-HHhCCC-CC---CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334456778777643 446666665555554443322 111111 00 0111233556777788877888888999
Q ss_pred HHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Q psy14395 403 IYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA 453 (471)
Q Consensus 403 i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~ 453 (471)
+++.++...+++..+-|+++.+++.++++|+++..+++|.++++.|+.+..
T Consensus 86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999999987643
No 54
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.41 E-value=0.0019 Score=65.04 Aligned_cols=132 Identities=14% Similarity=0.063 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHH
Q psy14395 314 GVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA 393 (471)
Q Consensus 314 G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~ 393 (471)
|+++.+++.+++|..++..|++. +.++.+.+. ..++.++........++. . ...+..+..-++.++.=.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~----~--~~~~~~~~~g~l~G~~w~ 70 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLP----E--FWALSIFLVGLLSGAFWA 70 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCC----c--ccccHHHHHHHHHHHHHH
Confidence 67788899999999999887764 566666653 223333322222111110 0 011333343444555567
Q ss_pred HHHHHHHHHHHhcChhHHHHHHH-HHHHHHHHHHHHHhCCCcchhh----HHHHHHHHHHHHHHHHhh
Q psy14395 394 AGQLFVFFTIYKFGAIVFTIIMT-VRQGLAILLSCIIYAHPISLLG----ILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 394 lgq~~if~~i~~~galt~sii~t-~rkv~sillSvllFge~lt~~~----~iG~~lV~~Gv~l~~~~k 456 (471)
.+|++.+.++++.|..+...+.+ +-.++..+.+.++|||+.+..+ ++|+++++.|+++....+
T Consensus 71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 79999999999999988877777 7778899999999999999999 999999999988875543
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.33 E-value=0.0087 Score=60.29 Aligned_cols=124 Identities=14% Similarity=0.164 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHH
Q psy14395 316 ILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAG 395 (471)
Q Consensus 316 ~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lg 395 (471)
.+.+++.+++|......|...+ +++|.++.++-..++.+..++..... +.+ +..++..+++...+
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~-----------~~~--~~~~~~~g~~~~~~ 71 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARP-----------KVP--LNLLLGYGLTISFG 71 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCC-----------CCc--hHHHHHHHHHHHHH
Confidence 4466778888888888876553 58999999888777665443322110 111 12333445544444
Q ss_pred HH-HHHHHHHh-cChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 396 QL-FVFFTIYK-FGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 396 q~-~if~~i~~-~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
+. +.+..+++ .++...+++..+-|+++.++++++++|+++..+++|.++.+.|+.+-..
T Consensus 72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 43 44566676 4677888889999999999999999999999999999999999876653
No 56
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.26 E-value=0.0095 Score=59.95 Aligned_cols=129 Identities=16% Similarity=0.119 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHH
Q psy14395 314 GVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA 393 (471)
Q Consensus 314 G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~ 393 (471)
++++++.+.+++|......|...+ ..+|..+.+.-...+.++.++.. . .. . ..+++ ...++..++...
T Consensus 5 ~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~---~-~~-~---~~~~~--~~~~~~~~l~~~ 72 (295)
T PRK11689 5 ATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV---G-FP-R---LRQFP--KRYLLAGGLLFV 72 (295)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc---c-cc-c---ccccc--HHHHHHHhHHHH
Confidence 566777888888888777776543 47899888888777776665432 1 00 0 11111 122222233223
Q ss_pred HHHHHHHHHHH----hcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 394 AGQLFVFFTIY----KFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 394 lgq~~if~~i~----~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
..+.+.+..++ ..++...+++..+-|+++.++++++++|+++..+|+|+++.+.|+.+-..
T Consensus 73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~ 137 (295)
T PRK11689 73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG 137 (295)
T ss_pred HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence 33444444443 45777888999999999999999999999999999999999999876543
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.25 E-value=0.005 Score=55.18 Aligned_cols=56 Identities=13% Similarity=0.199 Sum_probs=37.8
Q ss_pred hhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHh
Q psy14395 239 FEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFM 296 (471)
Q Consensus 239 ~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~ 296 (471)
.++..++++|.-++.+....|.+.+.+++.++++ ++.+..++.+.++..+|+.+..
T Consensus 97 ~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~--~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 97 SSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFG--EPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcC--CcCCHHHHHHHHHHHHHHheee
Confidence 3444444555555555555555555555555555 9999999999999999987643
No 58
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.17 E-value=0.0039 Score=53.97 Aligned_cols=60 Identities=7% Similarity=0.164 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Q psy14395 393 AAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ 452 (471)
Q Consensus 393 ~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~ 452 (471)
.+..++....+++.+..+......+..+.+.++|+++|||++|+.+++|+++++.|+.+-
T Consensus 48 ~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 48 GLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 345566677899999988888888999999999999999999999999999999998764
No 59
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.00 E-value=0.044 Score=53.56 Aligned_cols=140 Identities=24% Similarity=0.194 Sum_probs=91.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHH
Q psy14395 312 LSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSIS 391 (471)
Q Consensus 312 ~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~ 391 (471)
..+....+...+.++......+..... ..+.....+.....+.+...+...... . .....+...+...+.-.+.
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~ 79 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEP--R---GLRPALRPWLLLLLLALLG 79 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhc--c---cccccccchHHHHHHHHHH
Confidence 456666666667777776666554432 345555555455544444222211110 0 0011111122334444555
Q ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH-HHhCCCcchhhHHHHHHHHHHHHHHHHhhh
Q psy14395 392 SAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSC-IIYAHPISLLGILGILMVLMAVLLQAYCKL 457 (471)
Q Consensus 392 ~~lgq~~if~~i~~~galt~sii~t~rkv~sillSv-llFge~lt~~~~iG~~lV~~Gv~l~~~~k~ 457 (471)
...++...+..+++.++...++...+.|+++.+++. ++++|+++..+|.|..+.+.|+.+-.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~ 146 (292)
T COG0697 80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG 146 (292)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence 667778888889999999999999999999999997 667999999999999999999988776543
No 60
>KOG1581|consensus
Probab=96.86 E-value=0.00064 Score=67.88 Aligned_cols=34 Identities=44% Similarity=0.818 Sum_probs=31.9
Q ss_pred ccchhhhhhhhcccchhhHHHHhhhhHHHHHHHH
Q psy14395 234 KSYEYFEYISALYISFPAQVLAKSCKILAVMFMG 267 (471)
Q Consensus 234 ~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~ 267 (471)
+..+++++.||+|+|||+|++.||||.+|||+++
T Consensus 94 ~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg 127 (327)
T KOG1581|consen 94 TLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG 127 (327)
T ss_pred hcchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence 4567899999999999999999999999999998
No 61
>KOG1580|consensus
Probab=96.83 E-value=0.00017 Score=69.43 Aligned_cols=31 Identities=39% Similarity=0.680 Sum_probs=28.6
Q ss_pred hhhhhhhhcccchhhHHHHhhhhHHHHHHHH
Q psy14395 237 EYFEYISALYISFPAQVLAKSCKILAVMFMG 267 (471)
Q Consensus 237 ~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~ 267 (471)
...+|.|++|++||||++.|||||+|||++|
T Consensus 99 MVssN~Alq~vpYPTqVlgKScKPIPVMilG 129 (337)
T KOG1580|consen 99 MVSSNQALQYVPYPTQVLGKSCKPIPVMILG 129 (337)
T ss_pred HHhccchhcccCCcHHHhcccCCCcceeeee
Confidence 4567999999999999999999999999887
No 62
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.81 E-value=0.0042 Score=61.22 Aligned_cols=77 Identities=13% Similarity=0.217 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhhhh
Q psy14395 383 LDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKLRK 459 (471)
Q Consensus 383 ~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~r~ 459 (471)
.....=+++.++.+...|..+++.+|.+..+....|-++|-++++++++++++..||+++.+.+.|+.+........
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 33444466777888999999999999999999999999999999999999999999999999999999887765543
No 63
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.76 E-value=0.029 Score=57.73 Aligned_cols=75 Identities=17% Similarity=0.267 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 382 TLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 382 ~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
++.-++++++=..++++...+.+.++.....+....-..+++++|+++++++.++.|++|++++++|+.+-....
T Consensus 79 ~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 79 WWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 444555688889999999999999999999999999999999999999999999999999999999988776654
No 64
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.53 E-value=0.12 Score=46.41 Aligned_cols=129 Identities=22% Similarity=0.272 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHH
Q psy14395 317 LLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQ 396 (471)
Q Consensus 317 lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq 396 (471)
+.+.+-.+-++....+-++-++.+ ++++-.+.+...+++.+....+..++. ..+...+.| +...+-++++...-
T Consensus 5 la~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p---~w~~lGG~lG~~~V 78 (138)
T PF04657_consen 5 LALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP--SLASLSSVP---WWAYLGGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCC---hHHhccHHHHHHHH
Confidence 344444444555555556654433 588888888888888877766655542 222222333 22334677788777
Q ss_pred HHHHHHHHhcChhHHHHHHHHHHHH-HHHHHHH-HhC---CCcchhhHHHHHHHHHHHHH
Q psy14395 397 LFVFFTIYKFGAIVFTIIMTVRQGL-AILLSCI-IYA---HPISLLGILGILMVLMAVLL 451 (471)
Q Consensus 397 ~~if~~i~~~galt~sii~t~rkv~-sillSvl-lFg---e~lt~~~~iG~~lV~~Gv~l 451 (471)
.....++.+.|+..+.....+-+++ ++++..+ +|| +++++...+|..+++.|+.+
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 8888899999999988888777764 4555655 444 68999999999999999863
No 65
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.47 E-value=0.089 Score=54.39 Aligned_cols=140 Identities=16% Similarity=0.097 Sum_probs=93.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHH--HHHH---HHHHhcchhhhhhhhh-cCchhhH
Q psy14395 310 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCL--FTAV---SLLQQGGFYQSLHFML-QFPSFTL 383 (471)
Q Consensus 310 ~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i--~~l~---~li~~g~l~~~~~f~~-~~p~~~~ 383 (471)
+...|+++.+++.+|.|-..+-+|+ . +.-+||.+ +. ..+.. +..| ..+..+++.+ ... .++..+.
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~---k~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~---~~~~~~~~~~~ 74 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-V---KKWSWETM-WS-VGGIFSWLILPWLIAALLLPDFWA---YYSSFSGSTLL 74 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-c---CCCchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHH---HHHhcCHHHHH
Confidence 4568999999999999988888876 2 33455655 32 22221 1122 1122233332 222 3445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHhCC-------CcchhhHHHHHHHHHHHHHHHHh
Q psy14395 384 DCILLSISSAAGQLFVFFTIYKFGAI-VFTIIMTVRQGLAILLSCIIYAH-------PISLLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 384 ~ill~~l~~~lgq~~if~~i~~~gal-t~sii~t~rkv~sillSvllFge-------~lt~~~~iG~~lV~~Gv~l~~~~ 455 (471)
..++.+++=.+||+..+.+++..|-. +..+.+-+.-++..+.+.+++|| +-.....+|+++++.|+.+..++
T Consensus 75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 66677777788999999999998865 46666667777889999999985 22245778999999999999885
Q ss_pred hhh
Q psy14395 456 KLR 458 (471)
Q Consensus 456 k~r 458 (471)
..+
T Consensus 155 g~~ 157 (345)
T PRK13499 155 GQL 157 (345)
T ss_pred hhh
Confidence 443
No 66
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.42 E-value=0.026 Score=49.65 Aligned_cols=63 Identities=17% Similarity=0.339 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 394 AGQLFVFFTIYKFGAIV-FTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 394 lgq~~if~~i~~~galt-~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
+..++...++++.+-.+ .++..-+.-+.+.++|+++|||++|+.+++|+++++.|+..-....
T Consensus 42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 34455566777776543 5666667888999999999999999999999999999998765543
No 67
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.38 E-value=0.019 Score=57.17 Aligned_cols=116 Identities=17% Similarity=0.172 Sum_probs=82.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q psy14395 340 KVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQ 419 (471)
Q Consensus 340 ~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rk 419 (471)
+=+|.|.++.+..-+.++.+...+..+.- ...++..+...++.+++=.+||..-|...++.|-..+-.++|--+
T Consensus 9 gG~~~~Q~lG~t~Gali~alv~~~~~~p~------~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~Q 82 (269)
T PF06800_consen 9 GGKPANQILGTTIGALIFALVVFLFRQPA------FSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQ 82 (269)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhCCC------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHH
Confidence 45677888888777777766554433221 111234445556667777889999999999999887777766555
Q ss_pred H-HHHHHHHHHhCCCcchhh----HHHHHHHHHHHHHHHHhhhhhhh
Q psy14395 420 G-LAILLSCIIYAHPISLLG----ILGILMVLMAVLLQAYCKLRKAS 461 (471)
Q Consensus 420 v-~sillSvllFge~lt~~~----~iG~~lV~~Gv~l~~~~k~r~k~ 461 (471)
. .+.+.++++|||--+..+ .+++++++.|+.+.++.++++++
T Consensus 83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~ 129 (269)
T PF06800_consen 83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK 129 (269)
T ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence 5 588999999999655444 44888999999999887766554
No 68
>COG2510 Predicted membrane protein [Function unknown]
Probab=96.30 E-value=0.015 Score=51.41 Aligned_cols=103 Identities=15% Similarity=0.215 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC--CCCCC--CchhhhHh-HHHHHhhhHHHhhhhcccChhHHHHHhhhhHHHHHHH
Q psy14395 151 SQFLVFVNRILALVVSGLSLLIINQ--PRHTV--PLYKYGFC-SFTNIMSSWCQYEALKYISFPAQVLAKSCKILAVMFM 225 (471)
Q Consensus 151 ~~fL~~~q~l~~~i~~~~~~~~~~~--~~~~~--p~~~~~~~-s~~~~~~~~~~n~aL~yvs~pt~vl~Ks~k~ipvml~ 225 (471)
|.|-++++.+...++....+...++ ....+ +.+.|... ++....+..|.+.|+|-
T Consensus 31 p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~-------------------- 90 (140)
T COG2510 31 PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKK-------------------- 90 (140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhc--------------------
Confidence 4467788888777776666665554 12112 22333333 33444555555555543
Q ss_pred HHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHh
Q psy14395 226 GKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFM 296 (471)
Q Consensus 226 ~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~ 296 (471)
..+|..+=+-...|+.+.+++++|+| ||.+..++++++++++|+.+..
T Consensus 91 ---------------------G~as~VvPldk~svvl~~lls~lfL~--E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 91 ---------------------GKASRVVPLDKTSVVLAVLLSILFLG--ERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred ---------------------CCcceEEEcccccHHHHHHHHHHHhc--CCCCHHHHHHHHHHHhCeeeEe
Confidence 33333333345677888899999999 9999999999999999988754
No 69
>KOG1582|consensus
Probab=96.25 E-value=0.0013 Score=64.71 Aligned_cols=29 Identities=38% Similarity=0.690 Sum_probs=27.5
Q ss_pred hhhhhhcccchhhHHHHhhhhHHHHHHHH
Q psy14395 239 FEYISALYISFPAQVLAKSCKILAVMFMG 267 (471)
Q Consensus 239 ~~~~sL~yis~~~~~i~Ks~~pi~v~ll~ 267 (471)
+++.|+.|.|||+|+++|+||.+|||++|
T Consensus 122 Lsn~SlgYLNYPtQviFKccKliPVmigg 150 (367)
T KOG1582|consen 122 LSNGSLGYLNYPTQVIFKCCKLIPVMIGG 150 (367)
T ss_pred cCcCccccccCcHHHHHHhhhhhhhhhee
Confidence 57899999999999999999999999888
No 70
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=96.17 E-value=0.34 Score=48.62 Aligned_cols=106 Identities=10% Similarity=0.014 Sum_probs=78.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHH
Q psy14395 311 TLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSI 390 (471)
Q Consensus 311 ~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l 390 (471)
...|..+++++.++.+...+..|...+ ..++.+..++-..++.+++++....... . ..++.+...+..++
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~-----~---~~~~~~~~~~~~g~ 79 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRL-----R---FAKEQRLPLLFYGV 79 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhc-----c---CCHHHHHHHHHHHH
Confidence 467899999999998888888877665 3889999999999988776654311110 0 11223334555666
Q ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHH
Q psy14395 391 SSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLS 426 (471)
Q Consensus 391 ~~~lgq~~if~~i~~~galt~sii~t~rkv~sillS 426 (471)
+....+.+.++++++.++...++...+-|+++.+++
T Consensus 80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~ 115 (293)
T PRK10532 80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS 115 (293)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh
Confidence 666677788899999999999999999999998887
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=95.96 E-value=0.065 Score=46.37 Aligned_cols=59 Identities=20% Similarity=0.252 Sum_probs=48.2
Q ss_pred HHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHh
Q psy14395 397 LFVFFTIYKFGAI-VFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 397 ~~if~~i~~~gal-t~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~ 455 (471)
++...++++.+-. ..++..-+.-+.+.++|+++|||++|+.+++|+++++.|+..-...
T Consensus 45 ~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 45 WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 4445667777654 4666677888899999999999999999999999999999886554
No 72
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.83 E-value=0.26 Score=42.61 Aligned_cols=58 Identities=7% Similarity=0.181 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Q psy14395 395 GQLFVFFTIYKFGAI-VFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ 452 (471)
Q Consensus 395 gq~~if~~i~~~gal-t~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~ 452 (471)
..++...++++.+-. ..++.+-..-+.+.+.|+++|||++|+.+++|+++++.|+..-
T Consensus 48 sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 48 AFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 344555677777654 4788888889999999999999999999999999999998763
No 73
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.74 E-value=0.3 Score=42.22 Aligned_cols=37 Identities=8% Similarity=0.040 Sum_probs=29.6
Q ss_pred hhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHh
Q psy14395 258 CKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFM 296 (471)
Q Consensus 258 ~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~ 296 (471)
..++.+++.+++++| ||.++++++++.++.+|+++..
T Consensus 72 l~~v~~~~~~~l~f~--E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 72 LNFVWVTLAAVKLWH--EPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHh
Confidence 345555666666666 9999999999999999998765
No 74
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.65 E-value=0.25 Score=42.44 Aligned_cols=60 Identities=5% Similarity=0.148 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Q psy14395 394 AGQLFVFFTIYKFGA-IVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA 453 (471)
Q Consensus 394 lgq~~if~~i~~~ga-lt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~ 453 (471)
+..++...++++.+- ...++..-+.-+.+.+.|+++|||++|+.+++|+.+++.|+..-+
T Consensus 41 ~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 41 VSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 344555667777765 457888888999999999999999999999999999999987654
No 75
>KOG2234|consensus
Probab=95.34 E-value=0.58 Score=48.14 Aligned_cols=69 Identities=13% Similarity=0.247 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhh
Q psy14395 389 SISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL 457 (471)
Q Consensus 389 ~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~ 457 (471)
++..++-|...|.++++.+|.|..+...+|-..|-++++++++++++..||...++-+.|+.+.+....
T Consensus 99 a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 99 ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence 445566666778899999999999999999999999999999999999999999999999999885443
No 76
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.12 E-value=4.9 Score=41.73 Aligned_cols=216 Identities=12% Similarity=0.049 Sum_probs=114.2
Q ss_pred chhhhhhhhcccchhhH-HHHhhhhHHHHHHHHHHhhCCCccc-------cHHHHHHHHHHHHHhHHHhc----cCCCcC
Q psy14395 236 YEYFEYISALYISFPAQ-VLAKSCKILAVMFMGKLVSAKPKSY-------EYFEYISALVISLGMLLFML----SSLDTS 303 (471)
Q Consensus 236 ~~~~~~~sL~yis~~~~-~i~Ks~~pi~v~ll~~lf~~~~kry-------s~~~~lsvili~~GV~lf~~----~~~~~~ 303 (471)
.+.....+++|+.++.. -+.-....+...+++.++.+ |-. ...-.++++++++|+++... .|.+.+
T Consensus 86 G~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~g--ew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~ 163 (345)
T PRK13499 86 GGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIING--NFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMG 163 (345)
T ss_pred hhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcc--ccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 45556666666665533 33333455555666666654 322 23357889999999999987 433211
Q ss_pred CC-CCCcchhhHHHHHHHHHHHHHHHH-------HHHHHHhhhcCCCHHHHHHHHHH---HH-HHHHHHHHHH---hcch
Q psy14395 304 DK-VGKTTTLSGVILLALYLSCDSFTS-------NWQGVLFESYKVTSLQMMFGTNL---FS-CLFTAVSLLQ---QGGF 368 (471)
Q Consensus 304 ~~-~~~~~~~~G~~lll~sl~~dal~~-------~~q~~l~~~~~~s~~~mmf~~~l---~s-~i~~l~~li~---~g~l 368 (471)
.+ .++.+.--|+++++++-+.++.++ ...+... ..+.++.....-... ++ .+..+..... .++-
T Consensus 164 ~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~-~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~ 242 (345)
T PRK13499 164 IKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA-ALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKD 242 (345)
T ss_pred cccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh-hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 00 123345679999999999988888 4443321 134444322221111 11 1111111111 1110
Q ss_pred hh-hhhhhhcCchhhHHH---HHHHHHHHHHHHHHHHHHHhcChhHHH----HHHHHHHHHHHHHHHHHhCCCcc-----
Q psy14395 369 YQ-SLHFMLQFPSFTLDC---ILLSISSAAGQLFVFFTIYKFGAIVFT----IIMTVRQGLAILLSCIIYAHPIS----- 435 (471)
Q Consensus 369 ~~-~~~f~~~~p~~~~~i---ll~~l~~~lgq~~if~~i~~~galt~s----ii~t~rkv~sillSvllFge~lt----- 435 (471)
.+ ..++-...+..+... .+-++.=++++.+....-++.|..... +.+.+--+++.+-++ +++|.=+
T Consensus 243 ~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~ 321 (345)
T PRK13499 243 LSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRP 321 (345)
T ss_pred cccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccc
Confidence 00 001100111112222 233444455666666666776544333 333555678888888 4888655
Q ss_pred -hhhHHHHHHHHHHHHHHHHh
Q psy14395 436 -LLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 436 -~~~~iG~~lV~~Gv~l~~~~ 455 (471)
...++|.++++.|..+-.+.
T Consensus 322 ~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 322 VRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hhHHHHHHHHHHHHHHHHhhc
Confidence 56789999999998876654
No 77
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.00 E-value=0.63 Score=40.94 Aligned_cols=73 Identities=15% Similarity=0.123 Sum_probs=51.1
Q ss_pred hhhHhHHHHHhhhHHHhhhhcccChhH-HHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHH
Q psy14395 184 KYGFCSFTNIMSSWCQYEALKYISFPA-QVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILA 262 (471)
Q Consensus 184 ~~~~~s~~~~~~~~~~n~aL~yvs~pt-~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~ 262 (471)
+....-+++..+..+-..++++++..+ |.+-.....+-+
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~---------------------------------------- 71 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFI---------------------------------------- 71 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHH----------------------------------------
Confidence 345555677778888888888877643 333333344444
Q ss_pred HHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccC
Q psy14395 263 VMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSS 299 (471)
Q Consensus 263 v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~ 299 (471)
.+.+.++++ |+.++.+++++.++++|++..-..+
T Consensus 72 -~~ig~~~f~--E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 72 -TLFSVLLFD--ESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred -HHHHHHHhC--CCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 445555555 9999999999999999999876554
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=94.97 E-value=0.22 Score=42.69 Aligned_cols=59 Identities=14% Similarity=0.273 Sum_probs=48.7
Q ss_pred HHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHh
Q psy14395 397 LFVFFTIYKFGAI-VFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 397 ~~if~~i~~~gal-t~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~ 455 (471)
.+.-.++++.+-. ..++.+-.--+.+.+.|+++|||++++.+++|+.+++.|+..-...
T Consensus 45 ~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 45 YLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 3344567776654 4788888889999999999999999999999999999998875543
No 79
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.43 E-value=0.31 Score=40.64 Aligned_cols=52 Identities=17% Similarity=0.262 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhcChhH-HHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHH
Q psy14395 394 AGQLFVFFTIYKFGAIV-FTIIMTVRQGLAILLSCIIYAHPISLLGILGILMV 445 (471)
Q Consensus 394 lgq~~if~~i~~~galt-~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV 445 (471)
+..++...++++.+..+ .++..-+..+.+.++|+++|||++|+.+++|+.++
T Consensus 41 ~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 41 LSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33455667788876655 46667788899999999999999999999999875
No 80
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.43 E-value=0.28 Score=49.83 Aligned_cols=121 Identities=15% Similarity=0.173 Sum_probs=83.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHH
Q psy14395 310 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLS 389 (471)
Q Consensus 310 ~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~ 389 (471)
+...|+.+.+.+.++.+...+.||+-..+.+.++.. .++ +..+ ..++|.+|..+++.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~-------------------~~~--~~~~-~l~~~~W~~G~~~~- 60 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR-------------------AGS--GGRS-YLRRPLWWIGLLLM- 60 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-------------------ccc--hhhH-HHhhHHHHHHHHHH-
Confidence 467899999999999999999998765543211000 000 0001 11333333333322
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 390 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 390 l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
.+|+...+.++...++...+..+.+.-+++.+++-.+.+|+++...++|.++++.|..+-....
T Consensus 61 ---~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 61 ---VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred ---hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 2344555567777788888888889999999999999999999999999999999987655443
No 81
>KOG2922|consensus
Probab=93.67 E-value=0.13 Score=52.06 Aligned_cols=186 Identities=9% Similarity=0.170 Sum_probs=100.6
Q ss_pred hhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccCCCcCCC----------CCCcchh-hHHHHHHHHHHHH
Q psy14395 257 SCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSSLDTSDK----------VGKTTTL-SGVILLALYLSCD 325 (471)
Q Consensus 257 s~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~~~~~~~----------~~~~~~~-~G~~lll~sl~~d 325 (471)
+...+..++++..+++ ||.++...+++.++++|-.+.....+++++. .++.+-. .++..+....+.
T Consensus 98 Alsvi~saila~~~L~--Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~- 174 (335)
T KOG2922|consen 98 ALSVIISAILASFFLK--EKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILI- 174 (335)
T ss_pred hHHHHHHHHHHHHHHH--HHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHh-
Confidence 4455667899999999 9999999999999999987776665543310 0111111 122211111110
Q ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHh--cc-hhhhhh--hhhcCchhhHHHHHHHHHHHHHHHHHH
Q psy14395 326 SFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQ--GG-FYQSLH--FMLQFPSFTLDCILLSISSAAGQLFVF 400 (471)
Q Consensus 326 al~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~--g~-l~~~~~--f~~~~p~~~~~ill~~l~~~lgq~~if 400 (471)
+ ....+++ ..+++-|..+.+.+-++..+-.- |. +...++ .-..+|..|..++....|....-....
T Consensus 175 -----~--~~~p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLN 245 (335)
T KOG2922|consen 175 -----F--FYAPRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLN 245 (335)
T ss_pred -----e--eeccccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0101222 33556677766665433211100 11 000000 011345444334444444444444556
Q ss_pred HHHHhcChhHHHH-HHHHHHHHHHHHHHHHhCC--Ccchh----hHHHHHHHHHHHHHHHH
Q psy14395 401 FTIYKFGAIVFTI-IMTVRQGLAILLSCIIYAH--PISLL----GILGILMVLMAVLLQAY 454 (471)
Q Consensus 401 ~~i~~~galt~si-i~t~rkv~sillSvllFge--~lt~~----~~iG~~lV~~Gv~l~~~ 454 (471)
.+++.+++...+. .-.+=..++|+.|.++|+| ..+.. ...|...++.|+++-..
T Consensus 246 kAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~ 306 (335)
T KOG2922|consen 246 KALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHR 306 (335)
T ss_pred HHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeee
Confidence 7888887765443 3334456889999999997 44444 45577788888877543
No 82
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=93.64 E-value=1.4 Score=37.81 Aligned_cols=72 Identities=17% Similarity=0.146 Sum_probs=48.3
Q ss_pred hhhHhHHHHHhhhHHHhhhhcccChhH-HHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHH
Q psy14395 184 KYGFCSFTNIMSSWCQYEALKYISFPA-QVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILA 262 (471)
Q Consensus 184 ~~~~~s~~~~~~~~~~n~aL~yvs~pt-~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~ 262 (471)
.....-+....+.++--.|+|.++..+ |.+--....+ .
T Consensus 32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v-----------------------------------------~ 70 (106)
T COG2076 32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIV-----------------------------------------G 70 (106)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH-----------------------------------------H
Confidence 334455566777777777777776654 3333333333 3
Q ss_pred HHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhcc
Q psy14395 263 VMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLS 298 (471)
Q Consensus 263 v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~ 298 (471)
+.+.++++++ |+.+..+++++.++.+|++..-..
T Consensus 71 ~~l~g~~~f~--E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 71 TALVGVLLFG--ESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHhcC--CcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4555666666 999999999999999999976543
No 83
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.58 E-value=2.8 Score=38.30 Aligned_cols=135 Identities=19% Similarity=0.192 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHHH
Q psy14395 314 GVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISSA 393 (471)
Q Consensus 314 G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~~ 393 (471)
..++.+.+-.+-.+.+....++.+..+ +|.--.+..+..+++.+....+. .+-.+..+...++|.+. ..=+++++
T Consensus 6 ~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pwW~---~~GG~lGa 80 (150)
T COG3238 6 YLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPWWA---WIGGLLGA 80 (150)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCchHH---HHccchhh
Confidence 344445555555555556666654333 56666666666777666554433 22122223333444322 11223333
Q ss_pred HHHHHHHHHHHhcChhHHHHHHHHHHHH-HHHHHHH-HhC---CCcchhhHHHHHHHHHHHHHHH
Q psy14395 394 AGQLFVFFTIYKFGAIVFTIIMTVRQGL-AILLSCI-IYA---HPISLLGILGILMVLMAVLLQA 453 (471)
Q Consensus 394 lgq~~if~~i~~~galt~sii~t~rkv~-sillSvl-lFg---e~lt~~~~iG~~lV~~Gv~l~~ 453 (471)
+.-...-....+.|+.++......-+++ ++++.-+ +|| ++++..-++|+++++.|+++..
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 2222223456788888877777666664 4445544 333 5899999999999999965543
No 84
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=93.37 E-value=2.2 Score=36.90 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccC
Q psy14395 261 LAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSS 299 (471)
Q Consensus 261 i~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~ 299 (471)
+.+.+.++++++ |+.++.+++++.++++|+++.-..+
T Consensus 69 v~~~l~g~~~f~--e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 69 VLISLLSWGFFG--QRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 345566666666 9999999999999999999886543
No 85
>KOG4510|consensus
Probab=93.33 E-value=0.026 Score=55.83 Aligned_cols=69 Identities=17% Similarity=0.339 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 386 ILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 386 ll~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
++=++.++.|-+.+|+++.+.+-.-+++++...|++++++|+++++||.|....+|..+.+.|+.+..+
T Consensus 101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR 169 (346)
T KOG4510|consen 101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR 169 (346)
T ss_pred EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence 455788888889999999999999999999999999999999999999999999999999999887654
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=93.31 E-value=1.7 Score=37.26 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhc
Q psy14395 261 LAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFML 297 (471)
Q Consensus 261 i~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~ 297 (471)
+.+.+.++++++ |+.++.+++++.++++|++..-.
T Consensus 68 v~~~lig~~~f~--e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 68 VGAAITGIVLLG--ESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHhC--CCCCHHHHHHHHHHHHHHHhhhc
Confidence 345566666666 99999999999999999998643
No 87
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=93.00 E-value=0.49 Score=42.06 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=46.3
Q ss_pred hhhhhhcccchhhHHHHhhhhHHHHHHHHHH--hhCCCccccHHHHHHHHHHHHHhHHHhcc
Q psy14395 239 FEYISALYISFPAQVLAKSCKILAVMFMGKL--VSAKPKSYEYFEYISALVISLGMLLFMLS 298 (471)
Q Consensus 239 ~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~l--f~~~~krys~~~~lsvili~~GV~lf~~~ 298 (471)
+=..+++..+.+...-+-+..+..+++.++. +++ |+.+++++++++++++|+.+...+
T Consensus 64 ~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~--E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 64 CWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFN--ETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHhccC
Confidence 4456777888777766666667777777774 788 999999999999999999997653
No 88
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=92.99 E-value=0.01 Score=57.98 Aligned_cols=202 Identities=12% Similarity=0.160 Sum_probs=123.7
Q ss_pred hhhhhhhhcccchhhHHHH-hhhhHHHHHHHHHHhhCCCccccHHHH----HHHHHHHHHhHHHhccCCCcCCCCCCcch
Q psy14395 237 EYFEYISALYISFPAQVLA-KSCKILAVMFMGKLVSAKPKSYEYFEY----ISALVISLGMLLFMLSSLDTSDKVGKTTT 311 (471)
Q Consensus 237 ~~~~~~sL~yis~~~~~i~-Ks~~pi~v~ll~~lf~~~~krys~~~~----lsvili~~GV~lf~~~~~~~~~~~~~~~~ 311 (471)
|..++.|.+++.++.+.=+ ....++-+-+++.+.++ |--+..+. ++++++++|+.+-...|.++++.++.++.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~--EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~ 150 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFH--EWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNL 150 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEe--ccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhh
Confidence 4456677777777754333 33566667788888887 77776664 57888999999888777544323344445
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHhcchhhhhhhhhcCchhhHHHHHHHH
Q psy14395 312 LSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSL-LQQGGFYQSLHFMLQFPSFTLDCILLSI 390 (471)
Q Consensus 312 ~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~l-i~~g~l~~~~~f~~~~p~~~~~ill~~l 390 (471)
-.|+..++.|.+.+-.|.+..+ ..+.+.+....-.. ++.+.....+ ...+|. ..+ ...+.-..-++
T Consensus 151 kkgi~~L~iSt~GYv~yvvl~~----~f~v~g~saiLPqA-iGMv~~ali~~~~~~~~-------~~~-K~t~~nii~G~ 217 (288)
T COG4975 151 KKGIVILLISTLGYVGYVVLFQ----LFDVDGLSAILPQA-IGMVIGALILGFFKMEK-------RFN-KYTWLNIIPGL 217 (288)
T ss_pred hhheeeeeeeccceeeeEeeec----cccccchhhhhHHH-HHHHHHHHHHhhccccc-------chH-HHHHHHHhhHH
Confidence 5688887777776665555443 22355444333221 2222222211 111110 001 11222233455
Q ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhH----HHHHHHHHHHHHHH
Q psy14395 391 SSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGI----LGILMVLMAVLLQA 453 (471)
Q Consensus 391 ~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~----iG~~lV~~Gv~l~~ 453 (471)
.=+.||++++.+-++.|-.|-=....+--+++.+-++++++|+=|..++ +|+.+++.|..+-.
T Consensus 218 ~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 218 IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 6678999999998888877655566677788899999999999887765 57777777765543
No 89
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=92.14 E-value=3.6 Score=35.51 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=27.3
Q ss_pred HHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHH
Q psy14395 261 LAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLF 295 (471)
Q Consensus 261 i~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf 295 (471)
+.+.+.+.++++ |+.++.+++++.+++.|++..
T Consensus 74 v~~~~ig~~~f~--e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 74 AATLAAGWILFG--QRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHh
Confidence 345566666666 999999999999999999875
No 90
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=91.07 E-value=0.47 Score=45.54 Aligned_cols=67 Identities=19% Similarity=0.275 Sum_probs=48.6
Q ss_pred cChhHHHHHhhhhHHHHHHHHHHHhcCCccchhhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHH
Q psy14395 206 ISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISA 285 (471)
Q Consensus 206 vs~pt~vl~Ks~k~ipvml~~~l~~~~~~~~~~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsv 285 (471)
+++|.++++|+++++|+|+.+....++ .++ ..+.+.++++.....+ ++.+..|+.+.
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~---------------~~~------~~~i~~~~l~~~g~l~--~~ls~~q~~al 58 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGK---------------QVT------QLKILSTALMTLGSLV--ASLGDDQWFSL 58 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccce---------------eee------hHHHHHHHHHHHHHHH--hHhhHHHHHHH
Confidence 689999999999999999999877651 111 2345566666776666 88888888777
Q ss_pred HHHHHHhHHH
Q psy14395 286 LVISLGMLLF 295 (471)
Q Consensus 286 ili~~GV~lf 295 (471)
.....|+...
T Consensus 59 ~~l~~~~~~~ 68 (222)
T TIGR00803 59 KLLKLGVAIV 68 (222)
T ss_pred HHHHHhHeee
Confidence 6666665443
No 91
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=89.84 E-value=12 Score=38.71 Aligned_cols=146 Identities=14% Similarity=0.073 Sum_probs=78.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCc-hhhHHHHHH
Q psy14395 310 TTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFP-SFTLDCILL 388 (471)
Q Consensus 310 ~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p-~~~~~ill~ 388 (471)
.-..|+++..+..++.|...+=.||. +.=+||.+..+..+-.-+.+|.+...=...+..+...+.| +.+....++
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv----k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV----KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc----CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 45789999888888877666655554 3334555554433222233444321111112223333444 334445556
Q ss_pred HHHHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHHHHHHHHH-------hCCCcchhhHHHHHHHHHHHHHHHHhhhhh
Q psy14395 389 SISSAAGQLFVFFTIYKFGA-IVFTIIMTVRQGLAILLSCII-------YAHPISLLGILGILMVLMAVLLQAYCKLRK 459 (471)
Q Consensus 389 ~l~~~lgq~~if~~i~~~ga-lt~sii~t~rkv~sillSvll-------Fge~lt~~~~iG~~lV~~Gv~l~~~~k~r~ 459 (471)
++.=-+|.+-.=.++++.|- +..++..-+--++..++--++ ++++-...-.+|+++++.|+.+..++..+|
T Consensus 80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 65544555555566777663 334444333333333332222 233445578899999999999988875433
No 92
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=86.15 E-value=0.24 Score=48.58 Aligned_cols=132 Identities=15% Similarity=0.122 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHH----HHHH
Q psy14395 314 GVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDC----ILLS 389 (471)
Q Consensus 314 G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~i----ll~~ 389 (471)
+++++++-++.+|.......+ .+=+|.|....+++-+.++.+...+. .+|+..... +..+
T Consensus 3 ~~liaL~P~l~WGsip~v~~k----~GG~p~qQ~lGtT~GALifaiiv~~~------------~~p~~T~~~~iv~~isG 66 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANK----FGGKPYQQTLGTTLGALIFAIIVFLF------------VSPELTLTIFIVGFISG 66 (288)
T ss_pred hHHHHHHHHHHhcccceeeee----cCCChhHhhhhccHHHHHHHHHHhee------------ecCccchhhHHHHHHhh
Confidence 455566667777766555433 34567888888887777776654332 223322333 3334
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHH-HHHHHHHHHhCCCcchhh----HHHHHHHHHHHHHHHHhhhhhhh
Q psy14395 390 ISSAAGQLFVFFTIYKFGAIVFTIIMTVRQG-LAILLSCIIYAHPISLLG----ILGILMVLMAVLLQAYCKLRKAS 461 (471)
Q Consensus 390 l~~~lgq~~if~~i~~~galt~sii~t~rkv-~sillSvllFge~lt~~~----~iG~~lV~~Gv~l~~~~k~r~k~ 461 (471)
..=.+||..-|.+++..|...+..++|--+. -+-+.+++.|||=-++.| .+..++++.|+++.++.++.+|+
T Consensus 67 ~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~ 143 (288)
T COG4975 67 AFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE 143 (288)
T ss_pred hHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc
Confidence 4446799999999999988877776665554 567999999999555544 44567788888887776654443
No 93
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=85.84 E-value=1.8 Score=42.90 Aligned_cols=83 Identities=18% Similarity=0.190 Sum_probs=51.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhcChh-HHHHHHHHHHHHHHHHHHH-HhCCC-----cchhhHHHHHHHHHHHHH
Q psy14395 379 PSFTLDCILLSISSAAGQLFVFFTIYKFGAI-VFTIIMTVRQGLAILLSCI-IYAHP-----ISLLGILGILMVLMAVLL 451 (471)
Q Consensus 379 p~~~~~ill~~l~~~lgq~~if~~i~~~gal-t~sii~t~rkv~sillSvl-lFge~-----lt~~~~iG~~lV~~Gv~l 451 (471)
|.+.....+-+..=+.||.+..-.++..|=- -..+.++..-+.....|-+ +||.+ -.+++++|+++++.|..+
T Consensus 52 p~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~ 131 (254)
T PF07857_consen 52 PPFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGII 131 (254)
T ss_pred CcceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHh
Confidence 3444444444555566777777777776642 3444444444444444433 67642 367899999999999999
Q ss_pred HHHhhhhhhh
Q psy14395 452 QAYCKLRKAS 461 (471)
Q Consensus 452 ~~~~k~r~k~ 461 (471)
+..-|...++
T Consensus 132 f~fik~~~~~ 141 (254)
T PF07857_consen 132 FSFIKSEEKE 141 (254)
T ss_pred eeeecCCCCC
Confidence 9887765533
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=85.34 E-value=8.3 Score=32.00 Aligned_cols=26 Identities=15% Similarity=0.300 Sum_probs=11.6
Q ss_pred HHHHHHHHHhhCCCccccHHHHHHHHHH
Q psy14395 261 LAVMFMGKLVSAKPKSYEYFEYISALVI 288 (471)
Q Consensus 261 i~v~ll~~lf~~~~krys~~~~lsvili 288 (471)
+.+.+.+.++++ |+.+..|++++.++
T Consensus 68 v~~~~~~~~~f~--E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 68 VGVTLVGVFFFG--ESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHH----------HHHHHHH
T ss_pred HHHHHHHHHHhC--CCCCHHHHhheeeC
Confidence 345555666666 99999999988764
No 95
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=84.83 E-value=2.6 Score=41.76 Aligned_cols=59 Identities=8% Similarity=0.021 Sum_probs=53.1
Q ss_pred hhhhhhhcccchhhHHHHhhhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhcc
Q psy14395 238 YFEYISALYISFPAQVLAKSCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLS 298 (471)
Q Consensus 238 ~~~~~sL~yis~~~~~i~Ks~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~ 298 (471)
-+|-++|...+.+++.+.-|.+|..-.+.|+++++ |+.+..||+++..++.+.+-.++.
T Consensus 225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~--e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLG--ETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHhccccc
Confidence 35888999999999999999999999999999999 999999999999998887755543
No 96
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=84.03 E-value=1.6 Score=37.95 Aligned_cols=59 Identities=19% Similarity=0.224 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhcChhHHHHH-HHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Q psy14395 393 AAGQLFVFFTIYKFGAIVFTII-MTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLL 451 (471)
Q Consensus 393 ~lgq~~if~~i~~~galt~sii-~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l 451 (471)
-.|....|+++++.+-.....+ +.+--++|.+.+.++.+|..+...++|+++++.|+.+
T Consensus 52 q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 52 QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3455677788888776655544 6888899999998888888899999999999999753
No 97
>KOG3912|consensus
Probab=83.24 E-value=3 Score=41.89 Aligned_cols=66 Identities=18% Similarity=0.256 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 389 SISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 389 ~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
++|-..|...+|..+..++|..+-+.--.--+++-++|..+++++++..||+|+..+..|+....+
T Consensus 93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 556666777778888888888888877777888889999999999999999999999999875543
No 98
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=80.64 E-value=3.8 Score=35.69 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=27.8
Q ss_pred hhhHHHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHH
Q psy14395 257 SCKILAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLF 295 (471)
Q Consensus 257 s~~pi~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf 295 (471)
|+.-+++++.++++.+ |..+++.++++++++.|+.+.
T Consensus 76 sl~fvfT~l~g~~lge--~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 76 SLAFVFTALTGWLLGE--EVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHhcC--cccchhHHHHHHHHHcCeeee
Confidence 4444556666666665 888999999999999998763
No 99
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=80.52 E-value=24 Score=31.54 Aligned_cols=57 Identities=14% Similarity=0.236 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCchhhhHhHHHHHhhhHHHhhhhcccC
Q psy14395 150 DSQFLVFVNRILALVVSGLSLLIINQP----RHTVPLYKYGFCSFTNIMSSWCQYEALKYIS 207 (471)
Q Consensus 150 ~~~fL~~~q~l~~~i~~~~~~~~~~~~----~~~~p~~~~~~~s~~~~~~~~~~n~aL~yvs 207 (471)
.|+.-++++...+++...++....+++ .++.|+|.|. -++.-.....+.+.+...+.
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG 89 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLG 89 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhh
Confidence 355566677777888877776666542 2356777664 44444444444445554444
No 100
>KOG2765|consensus
Probab=77.76 E-value=1.6 Score=45.34 Aligned_cols=74 Identities=11% Similarity=0.102 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhhh
Q psy14395 384 DCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCKL 457 (471)
Q Consensus 384 ~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k~ 457 (471)
..+.++..=+++|++...+++.++....++...+.-++++.++.++-+|++|+...++.++-++|+.+.+..+.
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s 234 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS 234 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence 34555555677888888889999999999999999999999999999999999999999999999877666543
No 101
>KOG1441|consensus
Probab=74.65 E-value=39 Score=34.72 Aligned_cols=76 Identities=12% Similarity=0.169 Sum_probs=64.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcch----------------------h
Q psy14395 380 SFTLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISL----------------------L 437 (471)
Q Consensus 380 ~~~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~----------------------~ 437 (471)
..+..++-+++...++..+....+++.+-...-++-.+.|+++.++++++++|+.+. .
T Consensus 81 ~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~f 160 (316)
T KOG1441|consen 81 LPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSF 160 (316)
T ss_pred cchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccc
Confidence 456677888888888999999999999999999999999999999999999998765 6
Q ss_pred hHHHHHHHHHHHHHHHHh
Q psy14395 438 GILGILMVLMAVLLQAYC 455 (471)
Q Consensus 438 ~~iG~~lV~~Gv~l~~~~ 455 (471)
+|.|....+++.......
T Consensus 161 n~~G~i~a~~s~~~~al~ 178 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALR 178 (316)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 778888888887665543
No 102
>KOG2563|consensus
Probab=59.56 E-value=91 Score=33.78 Aligned_cols=113 Identities=21% Similarity=0.308 Sum_probs=64.5
Q ss_pred chHHHHHHHh-hhhhcchhhhhhhhhcccc-ccccchHHHH-HHHHhhhhhhhhhhHHHHHHHHhhcchhhc--------
Q psy14395 3 RSITTVVATL-AALSIGFTYLFNKLVTSLE-DSYHEAWLFR-IVLNLLGYATIVLPGYILYRYVYTRHDFAD-------- 71 (471)
Q Consensus 3 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 71 (471)
|++.++++.. +-+|+.+-+++.+..=..+ |+.+.+|.+. +++-.-+-+++.++.. ..+.+++- ..-
T Consensus 174 ra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~--~~~~~~~P-~tPps~s~~~~ 250 (480)
T KOG2563|consen 174 RAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALV--LFVFTKKP-PTPPSASQAAL 250 (480)
T ss_pred hhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH--HHhcCCCC-CCCCchhHhhh
Confidence 6666666544 4588888999988765555 7778999987 3333444444444333 33322211 000
Q ss_pred -ccchhhhhhhhccCCCCchhhhhhhhccCcccccchhhHHHHHHHHHHHHHHHHhhhhcceeccccc
Q psy14395 72 -AGCIGYVITACFKDNTKSYAEEKEQLAGSVKSSVKQDALLLLFCTAGLQGSYLTWGVLQEKIMTQTY 138 (471)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y 138 (471)
+....+-++.|++ .++=.++...+..|+-.+|..+..+++.+--+-|
T Consensus 251 ~~~~f~~si~~~~~--------------------n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY 298 (480)
T KOG2563|consen 251 QDASFPKSIKSCFK--------------------NRQFIILAICYGIGLGLFNSLSTLLNLALCPSGY 298 (480)
T ss_pred hcCcHHHHHHHHHc--------------------CccHHHHHHHHhhhHHHHHHHHHHhhhccccccC
Confidence 0111222222221 1222455555677888899999999988876555
No 103
>KOG1583|consensus
Probab=59.55 E-value=26 Score=35.40 Aligned_cols=37 Identities=14% Similarity=0.338 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccC
Q psy14395 261 LAVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSS 299 (471)
Q Consensus 261 i~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~ 299 (471)
+...+++.+..+ ..+++..|++++++.+|-.++....
T Consensus 280 FvSLl~SiiyF~--Npft~~h~lGa~lVF~Gt~~fa~~~ 316 (330)
T KOG1583|consen 280 FVSLLFSIIYFE--NPFTPWHWLGAALVFFGTLLFANVW 316 (330)
T ss_pred HHHHhheeeEec--CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666 8999999999999999999987543
No 104
>KOG2890|consensus
Probab=59.45 E-value=40 Score=34.33 Aligned_cols=154 Identities=15% Similarity=0.102 Sum_probs=82.5
Q ss_pred HHHHHHhhhhhcchhhhhhhhhccccccccchHHHHHHHHhhhhhhhhhhHHHHHHHHhhcchhhc---ccchhhhhhhh
Q psy14395 6 TTVVATLAALSIGFTYLFNKLVTSLEDSYHEAWLFRIVLNLLGYATIVLPGYILYRYVYTRHDFAD---AGCIGYVITAC 82 (471)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 82 (471)
-+|+..+-.+++| ++.+|-+=.+ .+.-.|=.++|-.-+..+++|++++|...+... |+. .|...-+.--|
T Consensus 81 w~V~~sv~~L~v~-----G~~lEp~Wg~-~e~lkff~ivn~~~~l~v~v~~~l~Y~it~n~v-~L~~~i~G~~gilaGil 153 (326)
T KOG2890|consen 81 WDVLVSVLTLSVG-----GKFLEPNWGS-LELLKFFAIVNGSTTLVVLVPALLLYMITDNHV-YLYIPIHGTTGILAGIL 153 (326)
T ss_pred HHHHHHHHheeec-----ceeeccCCCC-HHHHHHHHHhhchhHHHHHHHHHHHHHHhcCce-EEEEEeccchHHHHHHH
Confidence 3566666677777 7776432222 233445567899999999999999998877666 776 44333333333
Q ss_pred c-----cCCCCchhhhhhhhc----cC--------cccccchhhHHHHHHHHHHHHHHHHhhhhcceecccccccCCcCC
Q psy14395 83 F-----KDNTKSYAEEKEQLA----GS--------VKSSVKQDALLLLFCTAGLQGSYLTWGVLQEKIMTQTYTNIMLEE 145 (471)
Q Consensus 83 ~-----~~~~~~~~~~~~~~~----~~--------~~~~~~~~~l~l~~~~~gi~~~~l~~gi~qE~i~~~~y~~~~~~~ 145 (471)
+ .+++.--.+..+..- |. ..........++.....|.+.+....-++|.+-.+.-+ |+..
T Consensus 154 Va~kQllpd~~il~~~~~r~~~~~lP~~~l~~~~il~i~~f~~f~~l~s~~~g~~~sWtYLRfyq~h~~~~~r---GD~S 230 (326)
T KOG2890|consen 154 VAWKQLLPDTIILELKSGRFLYAHLPLLVLFLSLILSIITFLVFASLPSITFGVLVSWTYLRFYQRHPTDELR---GDCS 230 (326)
T ss_pred HHHHHHcCceeEEeccchhhhhhhCCHHHHHHHHHHHHHHHHHhhhhHHHHHhhhhhhhhheecccCCccccc---CCch
Confidence 2 222211111000000 00 01122344455566667777777777777876654444 3334
Q ss_pred CccchhHHH-HHHHHHHHHHHHHHH
Q psy14395 146 GKFRDSQFL-VFVNRILALVVSGLS 169 (471)
Q Consensus 146 ~~F~~~~fL-~~~q~l~~~i~~~~~ 169 (471)
+.|++..|. -..|-++..+.-.++
T Consensus 231 d~F~fvsFFP~v~qp~~~li~n~~~ 255 (326)
T KOG2890|consen 231 DSFTFVSFFPEVLQPFFHLIANTIY 255 (326)
T ss_pred hceehhhhchhhhhHHHHHHHHHHH
Confidence 567655432 334555554444444
No 105
>KOG4314|consensus
Probab=58.44 E-value=15 Score=35.22 Aligned_cols=60 Identities=15% Similarity=0.319 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHH
Q psy14395 395 GQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAY 454 (471)
Q Consensus 395 gq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~ 454 (471)
.++....++++.+|...+-+....+.+.-+++++++|+++....++...+.++|+....|
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 455666789999999999999999999999999999999998888888888888765444
No 106
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=52.39 E-value=91 Score=29.68 Aligned_cols=23 Identities=22% Similarity=0.117 Sum_probs=13.3
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhc
Q psy14395 106 KQDALLLLFCTAGLQGSYLTWGVLQ 130 (471)
Q Consensus 106 ~~~~l~l~~~~~gi~~~~l~~gi~q 130 (471)
+..++.....+.|++ .+.+|+.+
T Consensus 79 ~~~~ld~~L~~~~if--~~~~gi~~ 101 (206)
T PF06570_consen 79 WLMALDNSLLFFGIF--SLLFGIMG 101 (206)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHH
Confidence 555666666666654 35556543
No 107
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.54 E-value=2e+02 Score=26.39 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=18.9
Q ss_pred ccccHHHHHHHHHHHHHhHHHh
Q psy14395 275 KSYEYFEYISALVISLGMLLFM 296 (471)
Q Consensus 275 krys~~~~lsvili~~GV~lf~ 296 (471)
++.+..++++++++.+|+.++.
T Consensus 124 ~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 124 RPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred CCCCHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999965543
No 108
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=45.50 E-value=2.7e+02 Score=26.40 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHh
Q psy14395 341 VTSLQMMFGTNLFSCLFTAVSLLQQ 365 (471)
Q Consensus 341 ~s~~~mmf~~~l~s~i~~l~~li~~ 365 (471)
+...|.+-|...+..++.+...+.+
T Consensus 54 la~~qIiVYvGAI~VLflFvIMll~ 78 (198)
T PRK06638 54 LGVVQIIVYVGAVMVLFLFVVMMLD 78 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3568889999888888777766654
No 109
>KOG1444|consensus
Probab=43.62 E-value=3.7e+02 Score=27.69 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCC-HHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHHHHHHH
Q psy14395 314 GVILLALYLSCDSFTSNWQGVLFESYKVT-SLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCILLSISS 392 (471)
Q Consensus 314 G~~lll~sl~~dal~~~~q~~l~~~~~~s-~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill~~l~~ 392 (471)
+...++.+.+.+-+..+..|-...+|+.+ ..-++.+.++.+.+.....-. .| +.+.-.+-...+..|..+ ++.-
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~-lv~~~~l~~~~~kk~~P~---~~lf 87 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LG-LVNFRPLDLRTAKKWFPV---SLLF 87 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hc-eeecCCcChHHHHHHccH---HHHH
Confidence 34445555555566667778888877754 345555666666544332211 01 000000001111112111 1111
Q ss_pred HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Q psy14395 393 AAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQA 453 (471)
Q Consensus 393 ~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~ 453 (471)
....+.-...+++..--+.++.-..-++++.+.-+++||...+..-|.......+|...+.
T Consensus 88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 1112233455777777888888888889999999999999999999999988888865543
No 110
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=41.79 E-value=32 Score=29.54 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCcchhhHHHHHHHHHHHHH
Q psy14395 423 ILLSCIIYAHPISLLGILGILMVLMAVLL 451 (471)
Q Consensus 423 illSvllFge~lt~~~~iG~~lV~~Gv~l 451 (471)
...|+++++|++++.+..|.+++.++++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 35678899999999999999999888653
No 111
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=41.51 E-value=30 Score=24.97 Aligned_cols=10 Identities=10% Similarity=0.122 Sum_probs=4.4
Q ss_pred HHHHHHHHhh
Q psy14395 447 MAVLLQAYCK 456 (471)
Q Consensus 447 ~Gv~l~~~~k 456 (471)
.|+.+|.--+
T Consensus 21 iGl~IyQkik 30 (49)
T PF11044_consen 21 IGLSIYQKIK 30 (49)
T ss_pred HHHHHHHHHH
Confidence 3444454433
No 112
>KOG2766|consensus
Probab=38.83 E-value=9 Score=38.16 Aligned_cols=71 Identities=15% Similarity=0.213 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Q psy14395 382 TLDCILLSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQ 452 (471)
Q Consensus 382 ~~~ill~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~ 452 (471)
|..-+++++.-.=+|+++..+-+.++-+.......-......++||++++.+-.+.++.|.++.+.|+..-
T Consensus 78 ~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvmv 148 (336)
T KOG2766|consen 78 WRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMV 148 (336)
T ss_pred HHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEE
Confidence 34445566666667877777777777777777777777788899999999999999999999999997543
No 113
>KOG1443|consensus
Probab=36.13 E-value=22 Score=36.37 Aligned_cols=29 Identities=21% Similarity=0.388 Sum_probs=27.2
Q ss_pred hhhhhhcccchhhHHHHhhhhHHHHHHHH
Q psy14395 239 FEYISALYISFPAQVLAKSCKILAVMFMG 267 (471)
Q Consensus 239 ~~~~sL~yis~~~~~i~Ks~~pi~v~ll~ 267 (471)
++|.|++|++.+.+.|.||+.++++.+++
T Consensus 100 LSN~sl~yVtlSlYTM~KSSsi~FIllFs 128 (349)
T KOG1443|consen 100 LSNWSLEYVTLSLYTMTKSSSILFILLFS 128 (349)
T ss_pred cccceeeeeeeeeeeeccccHHHHHHHHH
Confidence 58999999999999999999999998887
No 114
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.41 E-value=63 Score=27.47 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=26.5
Q ss_pred HHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Q psy14395 423 ILLSCIIYAHPISLLGILGILMVLMAVLLQ 452 (471)
Q Consensus 423 illSvllFge~lt~~~~iG~~lV~~Gv~l~ 452 (471)
..+|++..+||+.+-++.|.+++.+|+++.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 467999999999999999999999998653
No 115
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=34.78 E-value=40 Score=26.61 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh
Q psy14395 442 ILMVLMAVLLQAYCKLRKASLKK 464 (471)
Q Consensus 442 ~~lV~~Gv~l~~~~k~r~k~~~~ 464 (471)
+++.+.+...+.|.|.|+.++++
T Consensus 42 i~~~~lt~ltN~YFK~k~drr~~ 64 (68)
T PF04971_consen 42 IFFGLLTYLTNLYFKIKEDRRKA 64 (68)
T ss_pred HHHHHHHHHhHhhhhhhHhhhHh
Confidence 33445555566677765544443
No 116
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=33.76 E-value=45 Score=24.41 Aligned_cols=22 Identities=18% Similarity=0.387 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh
Q psy14395 442 ILMVLMAVLLQAYCKLRKASLK 463 (471)
Q Consensus 442 ~~lV~~Gv~l~~~~k~r~k~~~ 463 (471)
..++|.|+.++.+.++++|+-.
T Consensus 19 ~~~~Figiv~wa~~p~~k~~f~ 40 (48)
T cd01324 19 LALFFLGVVVWAFRPGRKKAFD 40 (48)
T ss_pred HHHHHHHHHHHHhCCCcchhHH
Confidence 4689999999999876655533
No 117
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=32.59 E-value=15 Score=37.02 Aligned_cols=70 Identities=14% Similarity=0.095 Sum_probs=0.0
Q ss_pred ccccHHHHHHHHHHHHHhHHHhccCCCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Q psy14395 275 KSYEYFEYISALVISLGMLLFMLSSLDTSDKVGKTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTN 351 (471)
Q Consensus 275 krys~~~~lsvili~~GV~lf~~~~~~~~~~~~~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~ 351 (471)
|-.-..-.+|++++++-+.+.++-.. ..+.-+.|+.+.++.+.+.=..+.+.. ++++++.+.|+++.+.-
T Consensus 75 rLLCPLGlLCiilimi~lLv~~L~tL------tGQ~LF~Gi~~l~l~~lLaL~vW~Ym~-lLr~~GAs~WtiLaFcL 144 (381)
T PF05297_consen 75 RLLCPLGLLCIILIMIVLLVSMLWTL------TGQTLFVGIVILFLCCLLALGVWFYMW-LLRELGASFWTILAFCL 144 (381)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHh------hccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHH
Confidence 55566667777777776666554332 233456787766554444323334433 66788999898876543
No 118
>PRK02237 hypothetical protein; Provisional
Probab=29.12 E-value=88 Score=27.04 Aligned_cols=36 Identities=17% Similarity=0.312 Sum_probs=31.0
Q ss_pred HHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccC
Q psy14395 262 AVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSS 299 (471)
Q Consensus 262 ~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~ 299 (471)
...+.++..-+ +|++..++++..++.+|+.+.++.+
T Consensus 72 ~Sl~W~w~vdg--~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 72 GSLLWLWVVDG--VRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHhcC--cCCChhHHHhHHHHHHhHHHheecC
Confidence 35577888888 9999999999999999999887654
No 119
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.
Probab=28.58 E-value=75 Score=30.98 Aligned_cols=30 Identities=33% Similarity=0.577 Sum_probs=25.9
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHhhhhhhh
Q psy14395 432 HPISLLGILGILMVLMAVLLQAYCKLRKAS 461 (471)
Q Consensus 432 e~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~ 461 (471)
.+++...++|+++.+.|+.++..+..++++
T Consensus 115 ~~~~~~~~~g~~l~~~g~~~E~~AD~Q~~~ 144 (235)
T PF06966_consen 115 PPLNWLDILGIALFLIGFLLETVADQQKYR 144 (235)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378889999999999999999998776654
No 120
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=27.72 E-value=3.2e+02 Score=23.62 Aligned_cols=45 Identities=11% Similarity=0.132 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHh
Q psy14395 411 FTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 411 ~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~ 455 (471)
.+..+-+=-+.|++-.+.+-|++++..-++|..+++.|+.+..+.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 444555567888999999999999999999999999998776554
No 121
>PRK02237 hypothetical protein; Provisional
Probab=27.53 E-value=4.1e+02 Score=23.04 Aligned_cols=46 Identities=11% Similarity=0.129 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 411 FTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 411 ~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
.+..+-+=-+.|++-.+.+-|++++..-++|.++++.|+.+..+..
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4455555677888999999999999999999999999988765543
No 122
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=27.52 E-value=83 Score=27.12 Aligned_cols=36 Identities=19% Similarity=0.440 Sum_probs=31.3
Q ss_pred HHHHHHHHhhCCCccccHHHHHHHHHHHHHhHHHhccC
Q psy14395 262 AVMFMGKLVSAKPKSYEYFEYISALVISLGMLLFMLSS 299 (471)
Q Consensus 262 ~v~ll~~lf~~~~krys~~~~lsvili~~GV~lf~~~~ 299 (471)
..++.++..-+ +|++..++++..++.+|+.+..+.+
T Consensus 70 ~Sl~W~w~vdg--~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 70 ASLLWGWLVDG--VRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHhhhcC--cCCChHHHHhHHHHHHhHHheEecC
Confidence 45677888888 9999999999999999999987754
No 123
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=27.42 E-value=48 Score=33.08 Aligned_cols=24 Identities=13% Similarity=0.465 Sum_probs=19.6
Q ss_pred CcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 433 PISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 433 ~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
.+|..||++..++..|+.+..+.+
T Consensus 234 ~ls~~Q~~sl~~i~~g~~~~~~~~ 257 (269)
T PRK12437 234 WLRIAQVISIPLIIIGIILIIYRR 257 (269)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHH
Confidence 379999999999999987765544
No 124
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=25.20 E-value=88 Score=22.65 Aligned_cols=19 Identities=16% Similarity=0.404 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHhhhhhh
Q psy14395 442 ILMVLMAVLLQAYCKLRKA 460 (471)
Q Consensus 442 ~~lV~~Gv~l~~~~k~r~k 460 (471)
..++|.|+.++.+.+++++
T Consensus 18 ~~~~F~gi~~w~~~~~~k~ 36 (49)
T PF05545_consen 18 FFVFFIGIVIWAYRPRNKK 36 (49)
T ss_pred HHHHHHHHHHHHHcccchh
Confidence 3567888899998766543
No 125
>PF14880 COX14: Cytochrome oxidase c assembly
Probab=25.02 E-value=53 Score=25.02 Aligned_cols=24 Identities=17% Similarity=0.321 Sum_probs=17.4
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHh
Q psy14395 432 HPISLLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 432 e~lt~~~~iG~~lV~~Gv~l~~~~ 455 (471)
|..+....+|..++-+|+..++..
T Consensus 14 HR~tV~~Lig~T~~~g~~~~~~~y 37 (59)
T PF14880_consen 14 HRTTVLGLIGFTVYGGGLTVYTVY 37 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777788888887777766544
No 126
>PRK11562 nitrite transporter NirC; Provisional
Probab=24.36 E-value=7.3e+02 Score=24.85 Aligned_cols=37 Identities=22% Similarity=0.086 Sum_probs=24.8
Q ss_pred CcchhhHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccC
Q psy14395 433 PISLLGILGILMVLMAVLLQAYCKLRKASLKKKLNQAE 470 (471)
Q Consensus 433 ~lt~~~~iG~~lV~~Gv~l~~~~k~r~k~~~~k~~~~~ 470 (471)
|.+..+++|..+.++..+++.+.+ +++.+++|-||.|
T Consensus 228 pvtLGNivGG~v~vg~~y~~~~~~-~~~~~~~~~~~~~ 264 (268)
T PRK11562 228 WVTLGNTLSGAVFMGLGYWYATPK-ANRPVAAKFNQTE 264 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-CcCchhhhHhhhh
Confidence 567778899987777777777644 4445555656554
No 127
>KOG2922|consensus
Probab=23.99 E-value=47 Score=34.16 Aligned_cols=123 Identities=14% Similarity=0.181 Sum_probs=73.9
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhcCchhhHHHHH
Q psy14395 308 KTTTLSGVILLALYLSCDSFTSNWQGVLFESYKVTSLQMMFGTNLFSCLFTAVSLLQQGGFYQSLHFMLQFPSFTLDCIL 387 (471)
Q Consensus 308 ~~~~~~G~~lll~sl~~dal~~~~q~~l~~~~~~s~~~mmf~~~l~s~i~~l~~li~~g~l~~~~~f~~~~p~~~~~ill 387 (471)
...+..|..+...+.++-|..-+.+|+-.++......+ .-+|. .... .+|.+|..++.
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r-----------------a~~gg----~~yl-~~~~Ww~G~lt 73 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR-----------------AGEGG----YGYL-KEPLWWAGMLT 73 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc-----------------ccCCC----cchh-hhHHHHHHHHH
Confidence 44567899888877777676667776655432110000 00111 1122 33333333333
Q ss_pred HHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHhh
Q psy14395 388 LSISSAAGQLFVFFTIYKFGAIVFTIIMTVRQGLAILLSCIIYAHPISLLGILGILMVLMAVLLQAYCK 456 (471)
Q Consensus 388 ~~l~~~lgq~~if~~i~~~galt~sii~t~rkv~sillSvllFge~lt~~~~iG~~lV~~Gv~l~~~~k 456 (471)
.+ +|...-|.+..--.+...+..+.+.-+.+.+++..+.+|++++...+|.++.+.|-.+-..+.
T Consensus 74 m~----vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 74 MI----VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HH----HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence 32 233333334444455556666777778889999999999999999999999999976554443
No 128
>PRK00052 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=23.33 E-value=70 Score=31.90 Aligned_cols=23 Identities=26% Similarity=0.537 Sum_probs=19.6
Q ss_pred CcchhhHHHHHHHHHHHHHHHHh
Q psy14395 433 PISLLGILGILMVLMAVLLQAYC 455 (471)
Q Consensus 433 ~lt~~~~iG~~lV~~Gv~l~~~~ 455 (471)
.+|..|++++.+++.|+.+..+.
T Consensus 236 ~ls~~Q~isl~~~~~gi~~~~~~ 258 (269)
T PRK00052 236 GLTMGQILSIPMILLGIILLIWA 258 (269)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHH
Confidence 37999999999999998877654
No 129
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=22.05 E-value=88 Score=27.76 Aligned_cols=20 Identities=20% Similarity=0.478 Sum_probs=8.7
Q ss_pred CCcchhhHHHHHHHHHHHHH
Q psy14395 432 HPISLLGILGILMVLMAVLL 451 (471)
Q Consensus 432 e~lt~~~~iG~~lV~~Gv~l 451 (471)
..-+....+|.++--.|+.+
T Consensus 75 ~~~si~~~~G~vlLs~GLml 94 (129)
T PF15099_consen 75 SHGSIISIFGPVLLSLGLML 94 (129)
T ss_pred CCcchhhhehHHHHHHHHHH
Confidence 33334444444444444433
No 130
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=21.96 E-value=82 Score=25.80 Aligned_cols=11 Identities=9% Similarity=0.362 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q psy14395 443 LMVLMAVLLQA 453 (471)
Q Consensus 443 ~lV~~Gv~l~~ 453 (471)
.+++.++++..
T Consensus 9 ~vv~~~i~yf~ 19 (84)
T TIGR00739 9 LVLIFLIFYFL 19 (84)
T ss_pred HHHHHHHHHHh
Confidence 33444444333
Done!