BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy144
(254 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DCX8|IYD1_MOUSE Iodotyrosine dehalogenase 1 OS=Mus musculus GN=Iyd PE=1 SV=1
Length = 285
Score = 288 bits (737), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 183/237 (77%)
Query: 16 SNAESETDEDDEFAPALPEALDHISYDFVKKSVEDIRQRSEEFYQLMNARRTVRFFSDEA 75
S + + +ED E E+++HI + + +++R RS+EFY+L+N RR+VRF S E
Sbjct: 47 STEDLQVEEDAEEWQEAEESVEHIPFSHTRYPEQEMRMRSQEFYELLNKRRSVRFISSEH 106
Query: 76 VPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERINYDKRMGKEWT 135
VP E+I N+IK AGT+PSGAHTEPWTFV+V+D DMK KIR+I+E EE INY KRMGK W
Sbjct: 107 VPMEVIENVIKAAGTAPSGAHTEPWTFVVVKDPDMKHKIREIIEEEEEINYMKRMGKRWV 166
Query: 136 TDLRPLKTSWQKEYLTTAPYLVVVFKQTYGFKEEGKRKKHYYHEMSVSLACGIMLAAIQY 195
TDL+ L+T+W KEYL TAP L+++FKQ +GF GK+K HYY+E+SVS+ACG++LAA+Q
Sbjct: 167 TDLKKLRTNWIKEYLDTAPVLILIFKQVHGFAANGKKKVHYYNEISVSIACGLLLAALQN 226
Query: 196 CGLVTLTSTPLNAGPALRTLLDRPGNEKLALLLPIGYPALDCTVPNLKRKDIEDIIV 252
GLVT+T+TPLN GP LR LL RP +EKL +LLP+GYP+ D TVP+LKRK ++ I+V
Sbjct: 227 AGLVTVTTTPLNCGPRLRVLLGRPSHEKLLVLLPVGYPSRDATVPDLKRKALDQIMV 283
>sp|Q5REW1|IYD1_PONAB Iodotyrosine dehalogenase 1 OS=Pongo abelii GN=IYD PE=2 SV=1
Length = 289
Score = 288 bits (736), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/250 (54%), Positives = 183/250 (73%), Gaps = 4/250 (1%)
Query: 3 PVMENNTKTPEGPSNAESETDEDDEFAPALPEALDHISYDFVKKSVEDIRQRSEEFYQLM 62
P ++ + K AE + DE E E ++HI + +++ +RS EFY+L+
Sbjct: 42 PWVDEDLKDSSDLHQAEEDADEWQESE----ENVEHIPFSHTHYPEKEMVKRSREFYELL 97
Query: 63 NARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEE 122
N RR+VRF S+E VP E+I N+I+TAGT+PSGAHTEPWTFV+V+D D+K KIR I+E EE
Sbjct: 98 NKRRSVRFISNEQVPMEVIDNVIRTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEGEE 157
Query: 123 RINYDKRMGKEWTTDLRPLKTSWQKEYLTTAPYLVVVFKQTYGFKEEGKRKKHYYHEMSV 182
INY KRMG W TDL+ L+T+W KEYL TAP L+++FKQ +GF GK+K HYY+E+SV
Sbjct: 158 EINYMKRMGHRWVTDLKKLRTNWIKEYLDTAPILILIFKQVHGFVANGKKKVHYYNEISV 217
Query: 183 SLACGIMLAAIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKLALLLPIGYPALDCTVPNL 242
S+ACGI+LAA+Q GLVT+T+TPLN GP LR LL RP +EKL +LLP+GYP+ + VP+L
Sbjct: 218 SIACGILLAALQNAGLVTVTTTPLNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEAMVPDL 277
Query: 243 KRKDIEDIIV 252
KRK ++ I+V
Sbjct: 278 KRKPLDQIMV 287
>sp|Q5BK17|IYD1_RAT Iodotyrosine dehalogenase 1 OS=Rattus norvegicus GN=Iyd PE=2 SV=1
Length = 285
Score = 281 bits (720), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/232 (57%), Positives = 180/232 (77%)
Query: 21 ETDEDDEFAPALPEALDHISYDFVKKSVEDIRQRSEEFYQLMNARRTVRFFSDEAVPKEI 80
+ +ED E E+++HI + + +++R RS+EFY+L++ RR++RF S E VP E+
Sbjct: 52 QVEEDTEEWQESEESVEHILFSHTRYPEQEMRMRSQEFYELLSKRRSIRFISSEPVPMEV 111
Query: 81 IHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERINYDKRMGKEWTTDLRP 140
I N+IK AGT+PSGAHTEPWTFV+V+D DMK KIR+I+E EE INY KRMGK W TDL+
Sbjct: 112 IDNVIKAAGTAPSGAHTEPWTFVVVKDPDMKHKIREIIEEEEEINYMKRMGKRWVTDLKK 171
Query: 141 LKTSWQKEYLTTAPYLVVVFKQTYGFKEEGKRKKHYYHEMSVSLACGIMLAAIQYCGLVT 200
L+T+W KEYL TAP L+++FKQ +GF GK+K HYY+E+SVS+ACGI+LAA+Q GLVT
Sbjct: 172 LRTNWIKEYLDTAPVLILIFKQVHGFAVNGKKKVHYYNEISVSIACGILLAALQNAGLVT 231
Query: 201 LTSTPLNAGPALRTLLDRPGNEKLALLLPIGYPALDCTVPNLKRKDIEDIIV 252
+T+TPLN GP LR LL RP +EKL +LLP+GYP+ TVP+LKRK ++ I+V
Sbjct: 232 VTTTPLNCGPRLRVLLGRPSHEKLLVLLPVGYPSRGATVPDLKRKTLDQIMV 283
>sp|Q6PHW0|IYD1_HUMAN Iodotyrosine dehalogenase 1 OS=Homo sapiens GN=IYD PE=1 SV=2
Length = 289
Score = 277 bits (709), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 137/250 (54%), Positives = 185/250 (74%), Gaps = 4/250 (1%)
Query: 3 PVMENNTKTPEGPSNAESETDEDDEFAPALPEALDHISYDFVKKSVEDIRQRSEEFYQLM 62
P ++ + K AE + DE E E ++HI + +++ +RS+EFY+L+
Sbjct: 42 PWVDEDLKDSSDLHQAEEDADEWQESE----ENVEHIPFSHNHYPEKEMVKRSQEFYELL 97
Query: 63 NARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEE 122
N RR+VRF S+E VP E+I N+I+TAGT+PSGAHTEPWTFV+V+D D+K KIR I+E EE
Sbjct: 98 NKRRSVRFISNEQVPMEVIDNVIRTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEE 157
Query: 123 RINYDKRMGKEWTTDLRPLKTSWQKEYLTTAPYLVVVFKQTYGFKEEGKRKKHYYHEMSV 182
INY KRMG W TDL+ L+T+W KEYL TAP L+++FKQ +GF GK+K HYY+E+SV
Sbjct: 158 EINYMKRMGHRWVTDLKKLRTNWIKEYLDTAPILILIFKQVHGFAANGKKKVHYYNEISV 217
Query: 183 SLACGIMLAAIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKLALLLPIGYPALDCTVPNL 242
S+ACGI+LAA+Q GLVT+T+TPLN GP LR LL RP +EKL +LLP+GYP+ + TVP+L
Sbjct: 218 SIACGILLAALQNAGLVTVTTTPLNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEATVPDL 277
Query: 243 KRKDIEDIIV 252
KRK ++ I+V
Sbjct: 278 KRKPLDQIMV 287
>sp|Q6TA49|IYD1_PIG Iodotyrosine dehalogenase 1 OS=Sus scrofa GN=IYD PE=2 SV=1
Length = 289
Score = 263 bits (673), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 126/232 (54%), Positives = 176/232 (75%)
Query: 21 ETDEDDEFAPALPEALDHISYDFVKKSVEDIRQRSEEFYQLMNARRTVRFFSDEAVPKEI 80
+ +ED + E ++H+ + + +++ +RS+EFY+L+N RR+VRF S+E VP E+
Sbjct: 56 QVEEDADEWQESEEEVEHVPFSHTRYPEKEMVRRSQEFYELLNKRRSVRFISNERVPMEV 115
Query: 81 IHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERINYDKRMGKEWTTDLRP 140
I N+IK AGT+PSGAHTEPWTFV+V+D D+K +IR+I+E EE+INY KRMG W TDL+
Sbjct: 116 IDNVIKAAGTAPSGAHTEPWTFVVVKDPDVKHRIREIMEEEEKINYLKRMGPRWVTDLKK 175
Query: 141 LKTSWQKEYLTTAPYLVVVFKQTYGFKEEGKRKKHYYHEMSVSLACGIMLAAIQYCGLVT 200
L+T+W KEY TAP L+++FKQ +GF GK+K HYY+E+SVS+ACGI LAA+Q GLVT
Sbjct: 176 LRTNWIKEYWDTAPVLILIFKQVHGFAANGKKKIHYYNEISVSIACGIFLAALQNAGLVT 235
Query: 201 LTSTPLNAGPALRTLLDRPGNEKLALLLPIGYPALDCTVPNLKRKDIEDIIV 252
+T+TP N GP LR L+RP NEKL + LP+GYP+ + TVP+L RK ++ I+V
Sbjct: 236 VTTTPFNCGPRLRVFLNRPANEKLLMFLPVGYPSKEATVPDLPRKPLDQIMV 287
>sp|P34273|YKH5_CAEEL Uncharacterized protein C02C2.5 OS=Caenorhabditis elegans
GN=C02C2.5 PE=3 SV=2
Length = 344
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 134/204 (65%), Gaps = 2/204 (0%)
Query: 49 EDIRQR-SEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVED 107
+DI R S+ FY+ M RR+ R FS VP ++I N++KTAGTSPS + +PWTF +V
Sbjct: 137 DDITLRNSQIFYEEMKMRRSCRQFSSRDVPLKVIQNLLKTAGTSPSVGNLQPWTFCVVSS 196
Query: 108 KDMKAKIRDIVESEERINY-DKRMGKEWTTDLRPLKTSWQKEYLTTAPYLVVVFKQTYGF 166
+K IR I+E++ER NY ++ G W D+ L+ +W++ Y+T APYL++V + +
Sbjct: 197 DSIKTMIRKILEADERDNYVSRKKGASWVVDVSQLQDTWRRPYITDAPYLLIVCHEIFRD 256
Query: 167 KEEGKRKKHYYHEMSVSLACGIMLAAIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKLAL 226
+ +Y+++S S+A GI+LAAIQ GL T+ ++PLNAGP + +L RP NE + L
Sbjct: 257 VHSKTERVFHYNQISTSIAVGILLAAIQNVGLSTVVTSPLNAGPDISRILRRPENESILL 316
Query: 227 LLPIGYPALDCTVPNLKRKDIEDI 250
LLP+GY + D VP+LKRK +E I
Sbjct: 317 LLPLGYASEDVLVPDLKRKPVEHI 340
>sp|O28017|Y2267_ARCFU Putative NADH dehydrogenase/NAD(P)H nitroreductase AF_2267
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2267 PE=3 SV=1
Length = 174
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 56 EEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
EE +++ RR++R +SD + E I I+K A +PS + +PW F++V D++M K+
Sbjct: 2 EECLKMIYTRRSIRVYSDRQISDEDIEKILKAAMLAPSAGNEQPWHFIVVRDREMLKKM 60
>sp|O31571|YFHC_BACSU Putative NAD(P)H nitroreductase YfhC OS=Bacillus subtilis (strain
168) GN=yfhC PE=3 SV=1
Length = 194
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 49 EDIRQRSEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDK 108
E I Q S ++ +RR++R F E VP +I ++++TA +P+ TEPW F+ V +
Sbjct: 5 EQIHQHSV-LRDIIRSRRSIRKFKQEPVPSAVILDMLETAKYAPNHRVTEPWRFIYVSSE 63
Query: 109 DMKAKIRDIVESEERINYDKRMGKEWTTDLRPLKTSWQKEYLTTAP-YLVVVFKQTYGFK 167
KA + IN K+ D+ K K L P +L+VVF++
Sbjct: 64 TGKANL---------INTFAAFSKKSKPDMTEEKLQNFKNTLGRVPGFLLVVFQE----- 109
Query: 168 EEGKRKKHYYHEMSVSLACGIMLAAIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKLALL 227
+E +R + + SL + L A + + S + + NE+ A +
Sbjct: 110 DENERARDDDFAATSSLIQNLQLLAWEKGIGMVWKSGKILYDKEVHQAFGLQDNERFAAI 169
Query: 228 LPIGYP 233
+ GYP
Sbjct: 170 IQTGYP 175
>sp|A0QTG1|FBIB_MYCS2 Coenzyme F420:L-glutamate ligase OS=Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155) GN=fbiB PE=1 SV=1
Length = 454
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR FS E VP + I + A T+P+ HT P FV V+D + + ++ D
Sbjct: 263 RRSVRRFSAEPVPHDAIEAAVGEALTAPAPHHTRPVRFVWVQDSETRTRLLD-------- 314
Query: 125 NYDKRMGKEWTTDLRP--------LKTSWQKEYLTTAPYLVVVF---KQTYGFKEEGK-R 172
RM ++W DL + + + L AP LV+ F + + ++ +
Sbjct: 315 ----RMKEQWRADLTADGLDADAVDRRVARGQILYDAPELVIPFLVPDGAHSYPDDARTA 370
Query: 173 KKHYYHEMSVSLAC-GIMLA-AIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKLALLLPI 230
+H ++V A G+++A A++ G + ST + A +R L+ P + + + I
Sbjct: 371 AEHTMFTVAVGAAVQGLLVALAVRDIGSCWIGST-IFAADLVRAELELPDDWEPLGAIAI 429
Query: 231 GYP 233
GYP
Sbjct: 430 GYP 432
>sp|O25608|RDXA_HELPY Oxygen-insensitive NADPH nitroreductase OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=rdxA PE=1 SV=1
Length = 210
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 QLMNARRTVRFF-SDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI-RDI 117
QL+N R + + F S + I + A SPS +T+PW FV+V DKD+K +I
Sbjct: 11 QLLNERHSCKMFDSHYEFSSTELEEIAEIARLSPSSYNTQPWHFVMVTDKDLKKQIAAHS 70
Query: 118 VESEERINYDKRMGKEWTTDLRPLKTSWQKEYLTTA---PYLVVV---FKQTYG--FKEE 169
+EE I + LRP + Y+ Y V V F Q G F
Sbjct: 71 YFNEEMIKSASALMV--VCSLRPSELLPHGHYMQNLYPESYKVRVIPSFAQMLGVRFNHS 128
Query: 170 GKRKKHYYHE---MSVSLAC-GIMLAAIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKLA 225
+R + Y E ++V C G+ L + C + PL G L +++P K+A
Sbjct: 129 MQRLESYILEQCYIAVGQICMGVSLMGLDSC--IIGGFDPLKVGEVLEERINKP---KIA 183
Query: 226 LLLPIG 231
L+ +G
Sbjct: 184 CLIALG 189
>sp|O26223|Y120_METTH Putative NADH dehydrogenase/NAD(P)H nitroreductase
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=MTH_120 PE=3 SV=1
Length = 191
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 57 EFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRD 116
+ + + RR++R + D VP+E+I I+ A PS PW F++V +++M KI +
Sbjct: 24 DVLEAIKTRRSIRKYQDREVPEELIDKILDAAMCGPSAVDERPWHFIVVRNREMLEKIPE 83
Query: 117 I 117
+
Sbjct: 84 V 84
>sp|Q9CCK2|FBIB_MYCLE Coenzyme F420:L-glutamate ligase OS=Mycobacterium leprae (strain
TN) GN=fbiB PE=3 SV=1
Length = 457
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 9 TKTPEGPSNAESETDEDDEFAPALPEALDHISYDFVKKSVEDIRQRSEEFYQLMNARRTV 68
T P S TD+ L D + + +++E RQ++ QL+ RR+V
Sbjct: 219 TAMPVAVVRGLSPTDDGSTAQHLLRNGPDDLFWLGTTEALELGRQQA----QLL--RRSV 272
Query: 69 RFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERINYDK 128
R FSDE + E+I + A T+P+ HT P FV ++ ++ ++ D
Sbjct: 273 RQFSDEPIAAELIETAVAEALTAPAPHHTRPVRFVWLQTPAVRTRLLD------------ 320
Query: 129 RMGKEWTTDLR----PLKTSWQK----EYLTTAPYLVVVF---KQTYGFKEEGK-RKKHY 176
RM +W DL P Q+ + L AP +++ F + + + + +H
Sbjct: 321 RMADKWRLDLASDALPADAIAQRVARGQILYDAPEVIIPFMVPDGAHAYPDAARASAEHT 380
Query: 177 YHEMSVSLACGIMLAAIQYCGL 198
++V A +L A+ GL
Sbjct: 381 MFIVAVGAAVQALLVALAVRGL 402
>sp|A0QKC8|FBIB_MYCA1 Coenzyme F420:L-glutamate ligase OS=Mycobacterium avium (strain
104) GN=fbiB PE=3 SV=1
Length = 449
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR FS E VP E++ + A T+P+ HT P FV ++ ++ ++ D ++ + R
Sbjct: 261 RRSVRRFSAEPVPAELVREAVAEALTAPAPHHTRPVRFVWLQTPAVRTRLLDAMKDKWRA 320
Query: 125 NYDKRMGKEWTTDLRPLKTSWQK----EYLTTAPYLVV---VFKQTYGFKEEGKR-KKHY 176
+ D RP ++ ++ + L AP +V+ V + + + + +H
Sbjct: 321 DL--------AGDGRPAESIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTDAEHT 372
Query: 177 YHEMSVSLACGIMLAAIQYCGLVTL-TSTPLNAGPALRTLLDRPGNEKLALLLPIGYPA 234
++V A +L + GL + + + A +R +L P + + + IGY A
Sbjct: 373 MFTVAVGAAVQALLVGLAVRGLGSCWIGSTIFAADLVRAVLGLPADWEPLGAIAIGYAA 431
>sp|Q73UJ3|FBIB_MYCPA Coenzyme F420:L-glutamate ligase OS=Mycobacterium paratuberculosis
(strain ATCC BAA-968 / K-10) GN=fbiB PE=3 SV=1
Length = 449
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR FS E VP E++ + A T+P+ HT P FV ++ ++ ++ D ++ + R
Sbjct: 261 RRSVRRFSAEPVPAELVREAVAEALTAPAPHHTRPVRFVWLQTPAVRTRLLDAMKDKWRA 320
Query: 125 NYDKRMGKEWTTDLRPLKTSWQK----EYLTTAPYLVV---VFKQTYGFKEEGKR-KKHY 176
+ D RP ++ ++ + L AP +V+ V + + + + +H
Sbjct: 321 DL--------AGDGRPAESIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTDAEHT 372
Query: 177 YHEMSVSLACGIMLAAIQYCGLVTL-TSTPLNAGPALRTLLDRPGNEKLALLLPIGYPA 234
++V A +L + GL + + + A +RT L P + + + IGY A
Sbjct: 373 MFTVAVGAAVQALLVGLAVRGLGSCWIGSTIFAADLVRTELGLPADWEPLGAIAIGYAA 431
>sp|Q75UN0|FBIB_STRAU Coenzyme F420:L-glutamate ligase OS=Streptomyces aureofaciens
GN=fbiB PE=3 SV=2
Length = 429
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 35/227 (15%)
Query: 43 FVKKSVEDIRQ--RSEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPW 100
V+ + +D+ + SE Q + RRTVR F+ + V + + A T+P+ HT PW
Sbjct: 217 LVRAAADDMFRLGTSEALRQAVTLRRTVRSFTTDPVDPAAVRRAVAAAVTAPAPHHTTPW 276
Query: 101 TFVIVEDKDMKAKIRDIVESEERINYDKRMGKEWTTDLRPL---------KTSWQKEYLT 151
FV++E + ++ D M W DLR L + + + + L
Sbjct: 277 RFVLLESAGTRVRLLDA------------MLGAWQRDLRELDGWDEARIARRTARGDVLR 324
Query: 152 TAPYLVV---VFKQTYGFKEEGKRKKHYYHEM-SVSLACGI--MLAAIQYCGLVTL-TST 204
APYLVV V ++ + + R+ EM +V+ G+ +L A+ G + S+
Sbjct: 325 DAPYLVVPCLVMDGSHDYPD--PRRAAAEREMFTVAAGAGVQNLLVALTGEGYGSAWVSS 382
Query: 205 PLNAGPALRTLLDRPGNEKLALLLPIGYPALDCTVPNLKRKDIEDII 251
+ +R +LD P + +G PA VP +R++ E +
Sbjct: 383 TMFCRDTVREVLDLPEGWDPMGAVAVGRPA---EVPRERRREAEAFV 426
>sp|Q9KZK8|FBIB_STRCO Coenzyme F420:L-glutamate ligase OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=fbiB PE=3 SV=1
Length = 443
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
Query: 55 SEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
SE Q + RRTVR F+DE V + + A T+P+ HT PW FV++E + + ++
Sbjct: 245 SEAVRQAVTQRRTVRAFTDEPVDPGAVRRAVAAAVTAPAPHHTTPWRFVLLESGESRTRL 304
Query: 115 RDIVESEERINYDKRMGKEWTTDLRP--------LKTSWQKEYLTTAPYLVV 158
D M W DLR K + + L APYLVV
Sbjct: 305 LDA------------MRDAWIADLRRDGKSEESVAKRVRRGDVLRNAPYLVV 344
>sp|Q9ZKP7|RDXA_HELPJ Oxygen-insensitive NADPH nitroreductase OS=Helicobacter pylori
(strain J99) GN=rdxA PE=3 SV=1
Length = 210
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 21/186 (11%)
Query: 60 QLMNARRTVRFF-SDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI-RDI 117
QL+N R + + F S + I + A SPS +T+PW FV+V +KD+K +I
Sbjct: 11 QLLNERHSCKMFDSHYEFSSTELEEIAEIARLSPSSYNTQPWHFVMVTNKDLKKQIAAHS 70
Query: 118 VESEERINYDKRMGKEWTTDLRP---LKTSWQKEYLTTAPYLVVV---FKQTYG--FKEE 169
+EE I + L+P L TS + L Y V V F Q G F
Sbjct: 71 YFNEEMIKSASALMV--VCSLKPSELLPTSHYMQNLYPESYKVRVIPSFAQMLGVRFNHS 128
Query: 170 GKRKKHYYHE---MSVSLAC-GIMLAAIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKLA 225
++ + Y E ++V C G+ L + C + PL G L +++P K+
Sbjct: 129 MQKLESYILEQCYIAVGQICMGVSLMGLDSC--IIGGFDPLKVGEILEERINKP---KIV 183
Query: 226 LLLPIG 231
L+ +G
Sbjct: 184 CLIALG 189
>sp|Q82DE3|FBIB_STRAW Coenzyme F420:L-glutamate ligase OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=fbiB PE=3 SV=1
Length = 423
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 55 SEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
SE + + RRTVR F+DE V + + A T+P+ HT PW FV++E + + ++
Sbjct: 225 SEAVREAVTQRRTVRAFTDEPVDPGAVRRAVAAAVTAPAPHHTTPWRFVLLESAESRTRL 284
Query: 115 RDIVESEERINYDKRMGKEWTTDLRP--------LKTSWQKEYLTTAPYLVV---VFKQT 163
D M W DLR K + + L APYLVV V +
Sbjct: 285 LDA------------MRDAWIADLRGDRKTEESIAKRVRRGDVLRNAPYLVVPCMVMDGS 332
Query: 164 YGFKEEGKRKKHYYHEMSV 182
+ + + R+ EM V
Sbjct: 333 HSYGD--ARRDAAEREMFV 349
>sp|Q1CSR7|RDXA_HELPH Oxygen-insensitive NADPH nitroreductase OS=Helicobacter pylori
(strain HPAG1) GN=rdxA PE=3 SV=1
Length = 210
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 21/186 (11%)
Query: 60 QLMNARRTVRFF-SDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI-RDI 117
+L+N R + + F S + I + A SPS +T+PW FV+V +KD+K +I
Sbjct: 11 RLLNERHSCKMFDSHYEFSSTELEEIAEIARLSPSSYNTQPWHFVMVTNKDLKKQIAAHS 70
Query: 118 VESEERINYDKRMGKEWTTDLRPLKTSWQKEYLTTA---PYLVVV---FKQTYG--FKEE 169
+EE I + LRP + Y+ Y V V F Q G F
Sbjct: 71 YFNEEMIKSASALMV--VCSLRPSELLPHGHYMQNLYPESYKVRVIPSFAQMLGVRFNHS 128
Query: 170 GKRKKHYYHE---MSVSLAC-GIMLAAIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKLA 225
+R + Y E ++V C G+ L + C + PL G L +++P K+A
Sbjct: 129 MQRLESYILEQCYIAVGQICMGVSLMGLDSC--IIGGFDPLKVGEVLEERINKP---KIA 183
Query: 226 LLLPIG 231
L+ +G
Sbjct: 184 CLIALG 189
>sp|P96867|FBIB_MYCTU Coenzyme F420:L-glutamate ligase OS=Mycobacterium tuberculosis
GN=fbiB PE=1 SV=1
Length = 448
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR FS + VP +++ + A T+P+ HT P FV ++ ++A++ D
Sbjct: 260 RRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLD-------- 311
Query: 125 NYDKRMGKEWTTDLRP--------LKTSWQKEYLTTAPYLVV---VFKQTYGFKEEGKR- 172
RM +W +DL + + + L AP +V+ V + + + +
Sbjct: 312 ----RMKDKWRSDLTSDGLPADAIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTD 367
Query: 173 KKHYYHEMSVSLACGIMLAAIQYCGLVTL-TSTPLNAGPALRTLLDRPGNEKLALLLPIG 231
+H ++V A +L A+ GL + + + A +R LD P + + + IG
Sbjct: 368 AEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAADLVRDELDLPVDWEPLGAIAIG 427
Query: 232 Y 232
Y
Sbjct: 428 Y 428
>sp|A5U7T6|FBIB_MYCTA Coenzyme F420:L-glutamate ligase OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=fbiB PE=3 SV=1
Length = 448
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR FS + VP +++ + A T+P+ HT P FV ++ ++A++ D
Sbjct: 260 RRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLD-------- 311
Query: 125 NYDKRMGKEWTTDLRP--------LKTSWQKEYLTTAPYLVV---VFKQTYGFKEEGKR- 172
RM +W +DL + + + L AP +V+ V + + + +
Sbjct: 312 ----RMKDKWRSDLTSDGLPADAIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTD 367
Query: 173 KKHYYHEMSVSLACGIMLAAIQYCGLVTL-TSTPLNAGPALRTLLDRPGNEKLALLLPIG 231
+H ++V A +L A+ GL + + + A +R LD P + + + IG
Sbjct: 368 AEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAADLVRDELDLPVDWEPLGAIAIG 427
Query: 232 Y 232
Y
Sbjct: 428 Y 428
>sp|C1AH36|FBIB_MYCBT Coenzyme F420:L-glutamate ligase OS=Mycobacterium bovis (strain BCG
/ Tokyo 172 / ATCC 35737 / TMC 1019) GN=fbiB PE=3 SV=1
Length = 448
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR FS + VP +++ + A T+P+ HT P FV ++ ++A++ D
Sbjct: 260 RRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLD-------- 311
Query: 125 NYDKRMGKEWTTDLRP--------LKTSWQKEYLTTAPYLVV---VFKQTYGFKEEGKR- 172
RM +W +DL + + + L AP +V+ V + + + +
Sbjct: 312 ----RMKDKWRSDLTSDGLPADAIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTD 367
Query: 173 KKHYYHEMSVSLACGIMLAAIQYCGLVTL-TSTPLNAGPALRTLLDRPGNEKLALLLPIG 231
+H ++V A +L A+ GL + + + A +R LD P + + + IG
Sbjct: 368 AEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAADLVRDELDLPVDWEPLGAIAIG 427
Query: 232 Y 232
Y
Sbjct: 428 Y 428
>sp|A1KNR4|FBIB_MYCBP Coenzyme F420:L-glutamate ligase OS=Mycobacterium bovis (strain BCG
/ Pasteur 1173P2) GN=fbiB PE=3 SV=1
Length = 448
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR FS + VP +++ + A T+P+ HT P FV ++ ++A++ D
Sbjct: 260 RRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLD-------- 311
Query: 125 NYDKRMGKEWTTDLRP--------LKTSWQKEYLTTAPYLVV---VFKQTYGFKEEGKR- 172
RM +W +DL + + + L AP +V+ V + + + +
Sbjct: 312 ----RMKDKWRSDLTSDGLPADAIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTD 367
Query: 173 KKHYYHEMSVSLACGIMLAAIQYCGLVTL-TSTPLNAGPALRTLLDRPGNEKLALLLPIG 231
+H ++V A +L A+ GL + + + A +R LD P + + + IG
Sbjct: 368 AEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAADLVRDELDLPVDWEPLGAIAIG 427
Query: 232 Y 232
Y
Sbjct: 428 Y 428
>sp|Q7TWV3|FBIB_MYCBO Coenzyme F420:L-glutamate ligase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=fbiB PE=3 SV=1
Length = 448
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 25/181 (13%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR FS + VP +++ + A T+P+ HT P FV ++ ++A++ D
Sbjct: 260 RRSVRRFSTDPVPGDLVEAAVAEALTAPAPHHTRPTRFVWLQTPAIRARLLD-------- 311
Query: 125 NYDKRMGKEWTTDLRP--------LKTSWQKEYLTTAPYLVV---VFKQTYGFKEEGKR- 172
RM +W +DL + + + L AP +V+ V + + + +
Sbjct: 312 ----RMKDKWRSDLTSDGLPADAIERRVARGQILYDAPEVVIPMLVPDGAHSYPDAARTD 367
Query: 173 KKHYYHEMSVSLACGIMLAAIQYCGLVTL-TSTPLNAGPALRTLLDRPGNEKLALLLPIG 231
+H ++V A +L A+ GL + + + A +R LD P + + + IG
Sbjct: 368 AEHTMFTVAVGAAVQALLVALAVRGLGSCWIGSTIFAADLVRDELDLPVDWEPLGAIAIG 427
Query: 232 Y 232
Y
Sbjct: 428 Y 428
>sp|P96707|YDGI_BACSU Putative NAD(P)H nitroreductase YdgI OS=Bacillus subtilis (strain
168) GN=ydgI PE=3 SV=1
Length = 209
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 54 RSEEFYQLMNARRTVRFFSDEAV--PKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMK 111
++ +F ++M RR++R + D AV KE + I++ A T+PS + +PW F++++ + K
Sbjct: 3 KTNDFMEIMKGRRSIRNY-DPAVKISKEEMTEILEEATTAPSSVNAQPWRFLVIDSPEGK 61
Query: 112 AKI 114
K+
Sbjct: 62 EKL 64
>sp|Q5XCB9|Y809_STRP6 Putative NAD(P)H nitroreductase Spy0809 OS=Streptococcus pyogenes
serotype M6 (strain ATCC BAA-946 / MGAS10394)
GN=M6_Spy0809 PE=1 SV=1
Length = 200
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 57 EFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDK 108
+F +L R ++ F+D+ V E + I+ A +PS + +PW FV+V++K
Sbjct: 2 KFLELNKKRHAIKTFNDQPVDYEDLRTAIEIATLAPSANNIQPWKFVVVQEK 53
>sp|Q4L920|Y546_STAHJ Putative NAD(P)H nitroreductase SH0546 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH0546 PE=3 SV=1
Length = 218
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 56 EEFYQLMNARRTVRFFSDEA-VPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
E N R + F E V + H I++T SPS EPW FV++E++D+K K+
Sbjct: 6 ETIINAFNFRHATKEFDPEKKVSESDFHTILETGRLSPSSLGLEPWRFVVIENEDLKEKL 65
Query: 115 R 115
+
Sbjct: 66 K 66
>sp|Q60049|NOX_THET8 NADH dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634
/ DSM 579) GN=nox PE=1 SV=2
Length = 205
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRD 116
RR++R + + VP+ ++ I++ A +PS + +PW V+V D K +R+
Sbjct: 17 RRSIRRYRKDPVPEGLLREILEAALRAPSAWNLQPWRIVVVRDPATKRALRE 68
>sp|P94424|NFRA2_BACSU FMN reductase [NAD(P)H] OS=Bacillus subtilis (strain 168) GN=nfrA2
PE=1 SV=1
Length = 249
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 57 EFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRD 116
E + + R++R ++DE V +E + II+ ++PS + + T + V+DK+ K KI +
Sbjct: 3 EVIKSLTDHRSIRSYTDEPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISE 62
Query: 117 I 117
+
Sbjct: 63 L 63
>sp|B2FKV6|Y482_STRMK Putative NADH dehydrogenase/NAD(P)H nitroreductase Smlt0482
OS=Stenotrophomonas maltophilia (strain K279a)
GN=Smlt0482 PE=3 SV=1
Length = 196
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 60 QLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVE 119
QL RT F D+ VP ++ + P+ A+T P FV V K+ KAK+ +
Sbjct: 12 QLFRTARTQNAFLDKPVPASLLQELYDLVKWGPTAANTTPARFVFVTSKEAKAKLAPALS 71
Query: 120 SEERINYDKRMGKEWTT 136
N+DK M T
Sbjct: 72 EG---NHDKTMAAPVTA 85
>sp|B4SHM0|Y358_STRM5 Putative NADH dehydrogenase/NAD(P)H nitroreductase Smal_0358
OS=Stenotrophomonas maltophilia (strain R551-3)
GN=Smal_0358 PE=3 SV=1
Length = 196
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 60 QLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVE 119
QL RT F D+ VP ++ + P+ A+T P FV V K+ KAK+ +
Sbjct: 12 QLFRTARTQNGFLDKPVPASLLQELYDLVKWGPTAANTTPARFVFVTSKEAKAKLAPALS 71
Query: 120 SEERINYDKRM 130
N+DK M
Sbjct: 72 EG---NHDKTM 79
>sp|Q57431|Y1278_HAEIN Putative NAD(P)H nitroreductase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1278 PE=1 SV=1
Length = 220
Score = 38.5 bits (88), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 56 EEFYQLMNARRTVRFFS-DEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
E+ +L + R + R++ + + E I++ SPS +EPW F+++++K ++ K+
Sbjct: 7 EQVLELFHQRSSTRYYDPTKKISDEDFECILECGRLSPSSVGSEPWKFLVIQNKTLREKM 66
Query: 115 R 115
+
Sbjct: 67 K 67
>sp|Q5YQS0|FBIB_NOCFA Coenzyme F420:L-glutamate ligase OS=Nocardia farcinica (strain IFM
10152) GN=fbiB PE=3 SV=1
Length = 452
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 65 RRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDIVESEERI 124
RR+VR F+D V + I + A T+P+ HT P FV V D ++ R
Sbjct: 264 RRSVRTFADTPVEPDTIRAAVSVALTAPAPHHTRPVRFVWVRD------------AQRRQ 311
Query: 125 NYDKRMGKEWTTDLR 139
M +W DLR
Sbjct: 312 RLLAAMADKWRADLR 326
>sp|Q4A087|Y379_STAS1 Putative NAD(P)H nitroreductase SSP0379 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP0379 PE=3 SV=2
Length = 219
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 33/51 (64%)
Query: 67 TVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIRDI 117
T RF +++ + + + I++T SPS EPW FV++++++++ K++ I
Sbjct: 18 TKRFDANKKISESDFNTILETGRLSPSSLGLEPWRFVVIQNREIRDKLKAI 68
>sp|Q4L378|NFRA_STAHJ NADPH-dependent oxidoreductase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=nfrA PE=3 SV=1
Length = 251
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 13/63 (20%), Positives = 38/63 (60%)
Query: 55 SEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
S+ Y LM +VR F D+A+ E + +++ ++ + ++ + ++ + V+D ++K ++
Sbjct: 2 SDYVYDLMKKHHSVRQFKDKALSDETVQKLVEAGQSASTSSYLQTYSIIGVDDPEIKKQL 61
Query: 115 RDI 117
+++
Sbjct: 62 KEV 64
>sp|Q8CMQ4|NFRA_STAES NADPH-dependent oxidoreductase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=nfrA PE=3 SV=2
Length = 251
Score = 38.1 bits (87), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 13/63 (20%), Positives = 38/63 (60%)
Query: 55 SEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
S+ Y+LM +VR F ++ + E + +++ ++ + ++ + ++ + VED +KA++
Sbjct: 2 SDYVYELMKQHHSVRKFKNQPLGSETVEKLVEAGQSASTSSYLQTYSIIGVEDPSIKARL 61
Query: 115 RDI 117
+++
Sbjct: 62 KEV 64
>sp|Q17X32|RDXA_HELAH Oxygen-insensitive NADPH nitroreductase OS=Helicobacter acinonychis
(strain Sheeba) GN=rdxA PE=3 SV=1
Length = 210
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 23/187 (12%)
Query: 60 QLMNARRTVRFFSDE-AVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI---- 114
QL+N R + + F E + I + A SPS +T+PW FV+V +KD+K +I
Sbjct: 11 QLLNERHSCKMFDKHYTFSSEELEEIAEIARLSPSSYNTQPWHFVMVTNKDLKNQIAAHS 70
Query: 115 ---RDIVESEERINYDKRMGKEWTTDLRPLKTSWQKEYLTTA---PY---LVVVFKQTYG 165
+D++ES + L+P++ Y+ PY ++ F Q
Sbjct: 71 YFNKDMIESASALVV--------VCSLKPVELLPNGHYMQNLYDEPYRSRTLLSFAQMLD 122
Query: 166 FK-EEGKRKKHYYHEMSVSLACGIMLAAIQYCGLVTLTSTPLNAGPALRTLLDRPGNEKL 224
+ +K Y +A G + + GL + +A L R + K+
Sbjct: 123 LRFNHSMQKLESYILEQCYIAVGQICLGVSLMGLDSCIIGGFDALKVGEVLSQRINDPKI 182
Query: 225 ALLLPIG 231
A L+ +G
Sbjct: 183 ACLIALG 189
>sp|Q5HRX9|NFRA_STAEQ NADPH-dependent oxidoreductase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=nfrA PE=3 SV=1
Length = 251
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 13/63 (20%), Positives = 38/63 (60%)
Query: 55 SEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
S+ Y+LM +VR F ++ + E + +++ ++ + ++ + ++ + VED +KA++
Sbjct: 2 SDYVYELMKQHHSVRKFKNQPLGSETVEKLVEAGQSASTSSYLQTYSIIGVEDPSIKARL 61
Query: 115 RDI 117
+++
Sbjct: 62 KEV 64
>sp|Q43793|G6PDC_TOBAC Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana
tabacum PE=2 SV=1
Length = 593
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 22/146 (15%)
Query: 47 SVEDIRQRSEEFYQLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVE 106
S+E+ + ++ + R + R F ++P I N ++ A S S AH WT VIVE
Sbjct: 196 SLENFAELDKKLKEHEAGRFSNRLFY-LSIPPNIFINAVRCASLSASSAHG--WTRVIVE 252
Query: 107 -----DKDMKA----KIRDIVESEERINYDKRMGKEWTTDLRPLKTS-------WQKEYL 150
D + A ++ + ++ D +GKE +L L+ S W ++ +
Sbjct: 253 KPFGRDSESSAALTRSLKQYLNEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQCI 312
Query: 151 TTAPYLVVVFKQTYGFKEEGKRKKHY 176
+ +F + +G + G HY
Sbjct: 313 RNVQF---IFSEDFGTEGRGGYFDHY 335
>sp|Q8CN23|Y2073_STAES Putative NAD(P)H nitroreductase SE_2073 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_2073 PE=3 SV=1
Length = 220
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 76 VPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
+ E + I++T SPS EPW FV+V++K+++ K++
Sbjct: 27 ISDEDFNTILETGRLSPSSLGLEPWHFVVVQNKELREKLK 66
>sp|Q5HLA1|Y2086_STAEQ Putative NAD(P)H nitroreductase SERP2086 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP2086 PE=3
SV=1
Length = 220
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 76 VPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
+ E + I++T SPS EPW FV+V++K+++ K++
Sbjct: 27 ISDEDFNTILETGRLSPSSLGLEPWHFVVVQNKELREKLK 66
>sp|B0T152|Y018_CAUSK Putative NADH dehydrogenase/NAD(P)H nitroreductase Caul_0018
OS=Caulobacter sp. (strain K31) GN=Caul_0018 PE=3 SV=1
Length = 195
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 60 QLMNARRTVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKI 114
QL RT +SD+ +P+ ++ + P+ A+T P FV V+ + KA++
Sbjct: 11 QLFTQARTRNGWSDQPIPEAVLRELYDLVKFGPTAANTTPARFVFVQSPEAKARL 65
>sp|P96692|MHQN_BACSU Putative NAD(P)H nitroreductase MhqN OS=Bacillus subtilis (strain
168) GN=mhqN PE=1 SV=2
Length = 206
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 57 EFYQLMNARRTV-RFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
EF L+N RR+ F S + KE ++ + + +PS + + +V V D+D+K K++
Sbjct: 3 EFTHLVNERRSASNFLSGHPITKEDLNEMFELVALAPSAFNLQHTKYVTVLDQDVKEKLK 62
Query: 116 DIVESEERI 124
+ ++
Sbjct: 63 QAANGQYKV 71
>sp|Q2FVA4|Y2829_STAA8 Putative NAD(P)H nitroreductase SAOUHSC_02829 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_02829 PE=3 SV=1
Length = 223
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 67 TVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
T +F + V KE I+++ SPS EPW FV+++D+ ++ +++
Sbjct: 18 TKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELK 66
>sp|Q5HD30|Y2534_STAAC Putative NAD(P)H nitroreductase SACOL2534 OS=Staphylococcus aureus
(strain COL) GN=SACOL2534 PE=3 SV=1
Length = 223
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 67 TVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
T +F + V KE I+++ SPS EPW FV+++D+ ++ +++
Sbjct: 18 TKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELK 66
>sp|Q2FDY2|Y2462_STAA3 Putative NAD(P)H nitroreductase SAUSA300_2462 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_2462 PE=3 SV=1
Length = 223
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 67 TVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
T +F + V KE I+++ SPS EPW FV+++D+ ++ +++
Sbjct: 18 TKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELK 66
>sp|Q99RB2|Y2523_STAAM Putative NAD(P)H nitroreductase SAV2523 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV2523 PE=1 SV=1
Length = 223
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 67 TVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
T +F + V KE I+++ SPS EPW FV+++D+ ++ +++
Sbjct: 18 TKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELK 66
>sp|Q79ZZ6|Y2443_STAAW Putative NAD(P)H nitroreductase MW2443 OS=Staphylococcus aureus
(strain MW2) GN=MW2443 PE=3 SV=1
Length = 223
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 67 TVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
T +F + V KE I+++ SPS EPW FV+++D+ ++ +++
Sbjct: 18 TKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELK 66
>sp|Q6G6F2|Y2409_STAAS Putative NAD(P)H nitroreductase SAS2409 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS2409 PE=3 SV=1
Length = 223
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 67 TVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
T +F + V KE I+++ SPS EPW FV+++D+ ++ +++
Sbjct: 18 TKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELK 66
>sp|Q2YW87|Y2397_STAAB Putative NAD(P)H nitroreductase SAB2397c OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB2397c PE=3 SV=1
Length = 223
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 67 TVRFFSDEAVPKEIIHNIIKTAGTSPSGAHTEPWTFVIVEDKDMKAKIR 115
T +F + V KE I+++ SPS EPW FV+++D+ ++ +++
Sbjct: 18 TKQFDPQKKVSKEDFETILESGRLSPSSLGLEPWKFVVIQDQALRDELK 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,983,858
Number of Sequences: 539616
Number of extensions: 4106979
Number of successful extensions: 11449
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 11386
Number of HSP's gapped (non-prelim): 82
length of query: 254
length of database: 191,569,459
effective HSP length: 115
effective length of query: 139
effective length of database: 129,513,619
effective search space: 18002393041
effective search space used: 18002393041
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)