BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1440
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9R1S8|CAN7_MOUSE Calpain-7 OS=Mus musculus GN=Capn7 PE=2 SV=1
Length = 813
Score = 177 bits (450), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 144 QASWSAGQGPIKDVYNIGENPQFRLEVGG--GVGAVWILLTRHITQLEDFKQNREYITVL 201
++W A QGP+KD Y++ NPQ++LEV G AVW+LL+RHIT +DF NRE+IT++
Sbjct: 550 HSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMV 609
Query: 202 VYKNEGKRVYYPYDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIYYTL 261
VYK +GK+VYYP DPPPY+DG+RINSPHYL KI L + +TLVVSQYEK +TI+YT+
Sbjct: 610 VYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTV 669
Query: 262 RAYATCPFRLEKIENPYQFKE 282
R Y+ C F KI +PY +
Sbjct: 670 RVYSACSFTFSKIPSPYTLSK 690
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 112/174 (64%), Gaps = 15/174 (8%)
Query: 14 AYTAGQGPIKDVYNIGENPQFRLEVGG--GVGAVWILLTRHITQLEDFKQNREYITVLVY 71
+ A QGP+KD Y++ NPQ++LEV G AVW+LL+RHIT +DF NRE+IT++VY
Sbjct: 552 TWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVY 611
Query: 72 KNEGKRVYYPYDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIYYTLRA 131
K +GK+VYYP DPPPY+DG+RINSPHYL KI L + +TLVVSQYEK +TI+YT+R
Sbjct: 612 KTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRV 671
Query: 132 YATC---------PFRLEKRPQASWS----AGQGPIKDVYNIGENPQFRLEVGG 172
Y+ C P+ L KR WS G G ++ + QF ++ G
Sbjct: 672 YSACSFTFSKIPSPYTLSKRINGKWSGQSAGGCGNFQETHKNNPIYQFHIDKTG 725
>sp|A0FKG7|CAN7_PIG Calpain-7 OS=Sus scrofa GN=CAPN7 PE=2 SV=1
Length = 813
Score = 177 bits (449), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 105/142 (73%), Gaps = 2/142 (1%)
Query: 144 QASWSAGQGPIKDVYNIGENPQFRLEVGG--GVGAVWILLTRHITQLEDFKQNREYITVL 201
++W A QGP+KD Y++ NPQ++LEV G AVW+LL+RHIT +DF NRE+IT++
Sbjct: 550 HSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMV 609
Query: 202 VYKNEGKRVYYPYDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIYYTL 261
VYK +GK+VYYP DPPPY+DG+RINSPHYL KI L + +TLVVSQYEK +TI+YT+
Sbjct: 610 VYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTV 669
Query: 262 RAYATCPFRLEKIENPYQFKEE 283
R Y+ C F KI +PY ++
Sbjct: 670 RVYSACSFTFSKIPSPYTVSKQ 691
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 110/174 (63%), Gaps = 15/174 (8%)
Query: 14 AYTAGQGPIKDVYNIGENPQFRLEVGG--GVGAVWILLTRHITQLEDFKQNREYITVLVY 71
+ A QGP+KD Y++ NPQ++LEV G AVW+LL+RHIT +DF NRE+IT++VY
Sbjct: 552 TWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVY 611
Query: 72 KNEGKRVYYPYDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIYYTLRA 131
K +GK+VYYP DPPPY+DG+RINSPHYL KI L + +TLVVSQYEK +TI+YT+R
Sbjct: 612 KTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRV 671
Query: 132 YATCPFRLEKRPQ---------ASWS----AGQGPIKDVYNIGENPQFRLEVGG 172
Y+ C F K P WS G G ++ + QF +E G
Sbjct: 672 YSACSFTFSKIPSPYTVSKQINGKWSGQSAGGCGNFQETHKNNPIYQFHIEKSG 725
>sp|Q9Y6W3|CAN7_HUMAN Calpain-7 OS=Homo sapiens GN=CAPN7 PE=1 SV=1
Length = 813
Score = 177 bits (448), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%), Gaps = 2/141 (1%)
Query: 144 QASWSAGQGPIKDVYNIGENPQFRLEVGG--GVGAVWILLTRHITQLEDFKQNREYITVL 201
++W A QGP+KD Y++ NPQ++LEV G AVW+LL+RHIT +DF NRE+IT++
Sbjct: 550 HSTWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMV 609
Query: 202 VYKNEGKRVYYPYDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIYYTL 261
VYK +GK+VYYP DPPPY+DG+RINSPHYL KI L + +TLVVSQYEK +TI+YT+
Sbjct: 610 VYKTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTV 669
Query: 262 RAYATCPFRLEKIENPYQFKE 282
R Y+ C F KI +PY +
Sbjct: 670 RVYSACSFTFSKIPSPYTLSK 690
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 112/174 (64%), Gaps = 15/174 (8%)
Query: 14 AYTAGQGPIKDVYNIGENPQFRLEVGG--GVGAVWILLTRHITQLEDFKQNREYITVLVY 71
+ A QGP+KD Y++ NPQ++LEV G AVW+LL+RHIT +DF NRE+IT++VY
Sbjct: 552 TWDAKQGPVKDAYSLANNPQYKLEVQCPQGGAAVWVLLSRHITDKDDFANNREFITMVVY 611
Query: 72 KNEGKRVYYPYDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIYYTLRA 131
K +GK+VYYP DPPPY+DG+RINSPHYL KI L + +TLVVSQYEK +TI+YT+R
Sbjct: 612 KTDGKKVYYPADPPPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYEKQNTIHYTVRV 671
Query: 132 YATC---------PFRLEKRPQASWS----AGQGPIKDVYNIGENPQFRLEVGG 172
Y+ C P+ L KR WS G G ++ + QF +E G
Sbjct: 672 YSACSFTFSKIPSPYTLSKRINGKWSGQSAGGCGNFQETHKNNPIYQFHIEKTG 725
>sp|Q9Y6Z8|PALB_ASPOR Calpain-like protease palB/RIM13 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=palB PE=3 SV=1
Length = 854
Score = 62.0 bits (149), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 37/166 (22%)
Query: 31 NPQFRLEVGGGVGAVWILLTRHITQ-------LEDFKQNRE--YITVLVYKNEGKRVYYP 81
NPQF + G G VW+LL +H L++++ N E +I++ V+ +GKRV
Sbjct: 465 NPQFAVSTENG-GIVWLLLGKHFRTTGQPERPLDEYQANEESAFISIYVFNADGKRVSLS 523
Query: 82 ---YDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIY--YTLRAYATCP 136
PY+D SP+ L ++ + ++ YT+VVS+ + + ++ +TL A++TCP
Sbjct: 524 DGALHRGPYVD-----SPNTLMRLEMPPRTT--YTVVVSE-QSLPSLNQNFTLSAFSTCP 575
Query: 137 FRLEK---------RPQASW---SAGQGPIKDVYNIGENPQFRLEV 170
R+ K + Q SW +AG Y + NPQFRLE+
Sbjct: 576 VRMAKAQDKYMCVRKIQGSWTPSTAGGNAESSRYPL--NPQFRLEI 619
Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 23/130 (17%)
Query: 163 NPQFRLEVGGGVGAVWILLTRHITQ-------LEDFKQNRE--YITVLVYKNEGKRVYYP 213
NPQF + G G VW+LL +H L++++ N E +I++ V+ +GKRV
Sbjct: 465 NPQFAVSTENG-GIVWLLLGKHFRTTGQPERPLDEYQANEESAFISIYVFNADGKRVSLS 523
Query: 214 ---YDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIY--YTLRAYATCP 268
PY+D SP+ L ++ + ++ YT+VVS+ + + ++ +TL A++TCP
Sbjct: 524 DGALHRGPYVD-----SPNTLMRLEMPPRTT--YTVVVSE-QSLPSLNQNFTLSAFSTCP 575
Query: 269 FRLEKIENPY 278
R+ K ++ Y
Sbjct: 576 VRMAKAQDKY 585
>sp|Q00204|PALB_EMENI Calpain-like protease palB OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palB PE=3
SV=2
Length = 847
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 33/160 (20%)
Query: 30 ENPQFRLEVGGGVGAVWILLTRHITQLEDFKQNRE----YITVLVYKNEGKRVYYPYDP- 84
+NPQF + G G VW+LL RH+ +E + +I++ V+K GKRV
Sbjct: 463 KNPQFSVYTERG-GVVWLLLGRHLRTIESRASEEDERFGFISIYVFKG-GKRVALSDGAL 520
Query: 85 --PPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIY--YTLRAYATCPFRLE 140
PY+D SP+ L K+ + S+ YT VVS+ E + + +T+ A++ P R+
Sbjct: 521 HRGPYVD-----SPNTLMKLDVPPRST--YTAVVSE-ESLPRVSQNFTISAFSDSPVRIS 572
Query: 141 KRP---------QASW---SAGQGPIKDVYNIGENPQFRL 168
P Q SW +AG Y++ NPQF +
Sbjct: 573 HAPNKYICVTKVQGSWTPTTAGGNAESARYSL--NPQFSI 610
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 19/126 (15%)
Query: 162 ENPQFRLEVGGGVGAVWILLTRHITQLEDFKQNRE----YITVLVYKNEGKRVYYPYDP- 216
+NPQF + G G VW+LL RH+ +E + +I++ V+K GKRV
Sbjct: 463 KNPQFSVYTERG-GVVWLLLGRHLRTIESRASEEDERFGFISIYVFKG-GKRVALSDGAL 520
Query: 217 --PPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKMHTIY--YTLRAYATCPFRLE 272
PY+D SP+ L K+ + S+ YT VVS+ E + + +T+ A++ P R+
Sbjct: 521 HRGPYVD-----SPNTLMKLDVPPRST--YTAVVSE-ESLPRVSQNFTISAFSDSPVRIS 572
Query: 273 KIENPY 278
N Y
Sbjct: 573 HAPNKY 578
>sp|Q7RZP7|PALB_NEUCR Calpain-like protease palB/rim-13 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rim-13 PE=3 SV=2
Length = 986
Score = 36.6 bits (83), Expect = 0.19, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 244 YTLVVSQYEKMHTIYYTLRAYATCPFRLEKI 274
YT+V+S YE T Y+LR A CPF +E I
Sbjct: 752 YTIVLSTYEPGQTGRYSLRVSAACPFTIEPI 782
Score = 36.6 bits (83), Expect = 0.23, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 112 YTLVVSQYEKMHTIYYTLRAYATCPFRLEKRPQASWSAGQ 151
YT+V+S YE T Y+LR A CPF +E P S +AG+
Sbjct: 752 YTIVLSTYEPGQTGRYSLRVSAACPFTIE--PILSDAAGR 789
>sp|Q24742|TRX_DROVI Histone-lysine N-methyltransferase trithorax OS=Drosophila virilis
GN=trx PE=3 SV=1
Length = 3828
Score = 31.6 bits (70), Expect = 6.0, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 81 PYDPPPYLDGVRINSPHYLCKIILNENSSRKYTLVVSQYEKM-HTIYYTLRAYATCPFRL 139
P PPP D +I+ PH L +I + + K + + +EK+ + RA+ P L
Sbjct: 3479 PQQPPPMRDPKKISGPHLLYEIQSEDGFTYKSSSIAEIWEKVFEAVQVARRAHGLTP--L 3536
Query: 140 EKRPQASWSAGQ 151
+ P A S Q
Sbjct: 3537 PEGPLADMSGVQ 3548
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,490,606
Number of Sequences: 539616
Number of extensions: 5251071
Number of successful extensions: 10328
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 10299
Number of HSP's gapped (non-prelim): 28
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)