BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy14403
         (168 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|4FFB|B Chain B, A Tog:alphaBETA-Tubulin Complex Structure Reveals
           Conformation-Based Mechanisms For A Microtubule
           Polymerase
          Length = 463

 Score = 33.1 bits (74), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 66  ATFLLYDKRVKEMATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIE 122
           A F      VKE+  E+ ++Q K SDY +     N QT +  +  + L++ A   AN   
Sbjct: 314 AAFFRGKVSVKEVEDEMHKVQSKNSDYFVEWIPNNVQTAVCSVAPQGLDMAATFIANSTS 373

Query: 123 TRHL----EEQFTERSKKQHQLHELEAE 146
            + L     +QF+   K++  LH   +E
Sbjct: 374 IQELFKRVGDQFSAMFKRKAFLHWYTSE 401


>pdb|1FFX|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|1FFX|D Chain D, Tubulin:stathmin-Like Domain Complex
 pdb|1JFF|B Chain B, Refined Structure Of Alpha-Beta Tubulin From Zinc-Induced
           Sheets Stabilized With Taxol
 pdb|1IA0|B Chain B, Kif1a Head-Microtubule Complex Structure In Atp-Form
 pdb|1SA0|B Chain B, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA0|D Chain D, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA1|B Chain B, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|1SA1|D Chain D, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|2HXF|B Chain B, Kif1a Head-Microtubule Complex Structure In Amppnp-Form
 pdb|2HXH|B Chain B, Kif1a Head-Microtubule Complex Structure In Adp-Form
 pdb|2P4N|B Chain B, Human Monomeric Kinesin (1bg2) And Bovine Tubulin (1jff)
           Docked Into The 9-Angstrom Cryo-Em Map Of
           Nucleotide-Free Kinesin Complexed To The Microtubule
 pdb|3EDL|B Chain B, Kinesin13-Microtubule Ring Complex
 pdb|3EDL|G Chain G, Kinesin13-Microtubule Ring Complex
 pdb|3DCO|B Chain B, Drosophila Nod (3dc4) And Bovine Tubulin (1jff) Docked
           Into The 11-Angstrom Cryo-Em Map Of Nucleotide-Free Nod
           Complexed To The Microtubule
 pdb|2WBE|B Chain B, Kinesin-5-Tubulin Complex With Amppnp
 pdb|3IZ0|B Chain B, Human Ndc80 Bonsai Decorated Microtubule
 pdb|4ABO|A Chain A, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|C Chain C, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|E Chain E, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|G Chain G, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
          Length = 445

 Score = 31.2 bits (69), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ A    N    + L     EQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|2XRP|A Chain A, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|C Chain C, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|E Chain E, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|G Chain G, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|4ATU|A Chain A, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|C Chain C, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|E Chain E, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|G Chain G, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATX|A Chain A, Rigor Kinesin Motor Domain With An Ordered Neck-Linker,
           Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em
           Map Of Doublecortin-Microtubules Decorated With Kinesin
 pdb|4AQV|B Chain B, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian
           Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom
           Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain
           In The Ampppnp State.
 pdb|4AQW|B Chain B, Model Of Human Kinesin-5 Motor Domain (1ii6, 3hqd) And
           Mammalian Tubulin Heterodimer (1jff) Docked Into The
           9.5- Angstrom Cryo-em Map Of Microtubule-bound Kinesin-5
           Motor Domain In The Rigor State
          Length = 445

 Score = 31.2 bits (69), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ A    N    + L     EQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|1TUB|B Chain B, Tubulin Alpha-Beta Dimer, Electron Diffraction
 pdb|1TVK|B Chain B, The Binding Mode Of Epothilone A On A,B-Tubulin By
           Electron Crystallography
 pdb|3J1T|C Chain C, High Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
 pdb|3J1U|C Chain C, Low Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
          Length = 427

 Score = 30.8 bits (68), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ A    N    + L     EQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|4F61|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|D Chain D, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|F Chain F, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|H Chain H, Tubulin:stathmin-Like Domain Complex
          Length = 445

 Score = 30.8 bits (68), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ A    N    + L     EQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|4I4T|B Chain B, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I4T|D Chain D, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I50|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4I50|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4I55|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4I55|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4IIJ|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
 pdb|4IIJ|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
 pdb|4IHJ|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
 pdb|4IHJ|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
          Length = 445

 Score = 30.8 bits (68), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ A    N    + L     EQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|4DRX|B Chain B, Gtp-Tubulin In Complex With A Darpin
 pdb|4DRX|D Chain D, Gtp-Tubulin In Complex With A Darpin
          Length = 431

 Score = 30.8 bits (68), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ A    N    + L     EQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|3DU7|B Chain B, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3DU7|D Chain D, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3E22|B Chain B, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
 pdb|3E22|D Chain D, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
 pdb|3HKB|B Chain B, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKB|D Chain D, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|B Chain B, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|D Chain D, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|B Chain B, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|D Chain D, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|B Chain B, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|D Chain D, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|B Chain B, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|D Chain D, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|B Chain B, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|D Chain D, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
          Length = 445

 Score = 30.4 bits (67), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ A    N    + L     EQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|1Z2B|B Chain B, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
 pdb|1Z2B|D Chain D, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
          Length = 445

 Score = 30.4 bits (67), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ A    N    + L     EQFT
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|3RYC|B Chain B, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYC|D Chain D, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|B Chain B, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|D Chain D, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|B Chain B, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|D Chain D, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|B Chain B, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|D Chain D, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|4F6R|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|3UT5|B Chain B, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|3UT5|D Chain D, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|4EB6|B Chain B, Tubulin-vinblastine: Stathmin-like Complex
 pdb|4EB6|D Chain D, Tubulin-vinblastine: Stathmin-like Complex
          Length = 445

 Score = 29.6 bits (65), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 25  PGFRQVQDKRYYEGLLQLKIRDLTNEITRLKRQIELSAKEHATFL----LYDKRV--KEM 78
           PGF  +   R  +    L + +LT ++   K  +      H  +L    ++  R+  KE+
Sbjct: 268 PGFAPLT-SRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRGRMSMKEV 326

Query: 79  ATELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRA---ANDIETRHL----EEQFT 131
             ++  +Q K S Y +     N +T + DI    L++ +    N    + L     EQFT
Sbjct: 327 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFT 386

Query: 132 ERSKKQHQLHELEAE 146
              +++  LH    E
Sbjct: 387 AMFRRKAFLHWYTGE 401


>pdb|3RYS|A Chain A, The Crystal Structure Of Adenine Deaminase (Aaur1117) From
           Arthrobacter Aurescens
 pdb|3RYS|B Chain B, The Crystal Structure Of Adenine Deaminase (Aaur1117) From
           Arthrobacter Aurescens
          Length = 343

 Score = 26.6 bits (57), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 81  ELTELQGKLSDYNLTMDKVNTQTNIADIEEEYLELRAANDIETRHLE 127
           E T+LQ  L  Y   M  + T+ +  D+   YLE  AA  +  RH E
Sbjct: 55  EFTDLQSFLDLYYANMAVLQTEQDFTDMTRAYLERAAAGGV--RHAE 99


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.314    0.132    0.347 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,911,464
Number of Sequences: 62578
Number of extensions: 138169
Number of successful extensions: 407
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 396
Number of HSP's gapped (non-prelim): 44
length of query: 168
length of database: 14,973,337
effective HSP length: 92
effective length of query: 76
effective length of database: 9,216,161
effective search space: 700428236
effective search space used: 700428236
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 48 (23.1 bits)