BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14406
(275 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35459|ECH1_MOUSE Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus
musculus GN=Ech1 PE=2 SV=1
Length = 327
Score = 243 bits (621), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 161/208 (77%), Gaps = 5/208 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF +S++ +CR +++S AGK+FT+G+DL M S E+ + +D AR + LR
Sbjct: 87 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMAS---ELMQPSGDDAARIAWYLRD 143
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
LI+ YQK+ + +E+CPKPVI+A+HG CIGGG+ L++A DIRY T+DA+F +KEVD+GL A
Sbjct: 144 LISKYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLVSACDIRYCTQDAFFQIKEVDMGLAA 203
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGNQSLVNE+ F+ARK+ A EA + GLVS+++ DK+++L A L I
Sbjct: 204 DVGTLQRLPKVIGNQSLVNELTFSARKMMADEALDSGLVSRVFQDKDAMLNAAFALAADI 263
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
+SKSPVAVQG+K L++SRDH+V+E L+
Sbjct: 264 SSKSPVAVQGSKINLIYSRDHSVDESLD 291
>sp|Q62651|ECH1_RAT Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
OS=Rattus norvegicus GN=Ech1 PE=1 SV=2
Length = 327
Score = 243 bits (620), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 161/208 (77%), Gaps = 5/208 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF +S++ +CR +++S AGK+FT+G+DL M S +I + +DVAR + LR
Sbjct: 87 ELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMAS---DILQPPGDDVARIAWYLRD 143
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
LI+ YQK+ + +E+CPKPVI+A+HG CIGGG+ LI+A DIRY T+DA+F +KEVD+GL A
Sbjct: 144 LISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAA 203
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGN+SLVNE+ FTARK+ A EA + GLVS+++ DK+ +L A L I
Sbjct: 204 DVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADI 263
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
+SKSPVAVQG+K L++SRDH+V+E L+
Sbjct: 264 SSKSPVAVQGSKINLIYSRDHSVDESLD 291
>sp|Q13011|ECH1_HUMAN Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo
sapiens GN=ECH1 PE=1 SV=2
Length = 328
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 160/210 (76%), Gaps = 5/210 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF+ +S + +CR +++S AGK+FTAG+DL M S +I + +DVAR S LR
Sbjct: 88 EMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMAS---DILQPKGDDVARISWYLRD 144
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
+IT YQ++ + +ERCPKPVI+AVHG CIGGG+ L+TA DIRY +DA+F +KEVD+GL A
Sbjct: 145 IITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAA 204
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGNQSLVNE+AFTARK+ A EA GLVS+++ DKE +L A+ L I
Sbjct: 205 DVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEI 264
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+SKSPVAVQ TK L++SRDH+V E LN V
Sbjct: 265 SSKSPVAVQSTKVNLLYSRDHSVAESLNYV 294
>sp|Q5RFG0|ECH1_PONAB Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo
abelii GN=ECH1 PE=2 SV=1
Length = 328
Score = 241 bits (614), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 160/210 (76%), Gaps = 5/210 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ ECF+ +S + +CR +++S AGK+FTAG+DL M S +I + +DVAR S LR
Sbjct: 88 EMVECFNKISRDADCRAVVISGAGKMFTAGVDLMDMAS---DILQPKGDDVARISWYLRD 144
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
+IT YQ++ + +E+CPKPVI+AVHG CIGGG+ L+TA DIRY +DA+F +KEVD+GL A
Sbjct: 145 IITRYQETFNVIEKCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAA 204
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
DVG LQRLP++IGNQSLVNE+AFTARK+ A EA GLVS+++ DKE +L A+ L I
Sbjct: 205 DVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAEI 264
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+SKSPVAVQ TK L++SRDH+V E LN V
Sbjct: 265 SSKSPVAVQSTKVNLLYSRDHSVAESLNYV 294
>sp|Q54SS0|ECH1_DICDI Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
OS=Dictyostelium discoideum GN=ech1 PE=3 SV=1
Length = 293
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 125/211 (59%), Gaps = 8/211 (3%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSL---GQEIAEQEDVARKSKILR 57
E +D + + + R +IL GK TAGL+L + L E+++ ++ K++R
Sbjct: 56 EFISIYDEIQNDSKIRCVILRGEGKGLTAGLNLGKIAPLITGDSEVSQSQNNLDLFKMIR 115
Query: 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLT 117
+ +Q S+ + +C KP I+ +HGACIGGG+ +ITA DIR + DA F+++E + +
Sbjct: 116 R----WQASLDKINKCSKPTIALIHGACIGGGVDMITACDIRLCSSDAKFSIRETKLSII 171
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
AD+G LQR+ +I+G+ E+A T + I+A A LV+ +Y D ++LL+ +L
Sbjct: 172 ADLGTLQRISKIVGS-GFARELALTGKDIDAKTAERFNLVNHVYPDHDTLLSEGRKLALS 230
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
IA SP+ VQ TK TL + DH ++EGL +V
Sbjct: 231 IAQNSPLVVQATKLTLNHADDHTIDEGLYRV 261
>sp|A9MR28|CAID_SALAR Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1
Length = 261
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F S ++ RV I++ AG K F+AG DL E D L
Sbjct: 34 MGEAFLSFRDDPHLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + KPVI+AV+G GGG L AAD A F L E +G+ D
Sbjct: 89 ELFDLN--------KPVIAAVNGYAFGGGFELALAADFIICADHASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+I+ ++VN++ T R++ A EA G+V+++ E LL A EL +
Sbjct: 141 GGVLRLPKIL-PPAIVNDMVMTGRRMTAEEALRWGVVNRVVSPHE-LLDSARELARQLVQ 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+AV K+ +RD +VEEG +
Sbjct: 199 SAPLAVAALKEITRTTRDMSVEEGYRYI 226
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 104/194 (53%), Gaps = 15/194 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ + + E +IL+ AG K F AG D+S M +E+ E RK IL
Sbjct: 35 EMDYVIGEIENDSEVLAVILTGAGEKSFVAGADISEM----KEMNTIE--GRKFGIL--- 85
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
K LE KPVI+AV+G +GGG + + DIR A+ +A F EV +G+T
Sbjct: 86 ---GNKVFRRLELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPG 142
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G QRL R++G + ++ FTA+ I+A EA GLV+K+ + E L+ A E+ I
Sbjct: 143 FGGTQRLSRLVG-MGMAKQLIFTAQNIKADEALRIGLVNKVVEPSE-LMNTAKEIANKIV 200
Query: 180 SKSPVAVQGTKKTL 193
S +PVAV+ +K+ +
Sbjct: 201 SNAPVAVKLSKQAI 214
>sp|Q7U004|ECH12_MYCBO Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA12 PE=3 SV=1
Length = 285
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E +S + RV++L+ AG+ F++G D + E++ R + LR +
Sbjct: 53 EALAQVSYDNSVRVVVLTGAGRGFSSGADHKS----AGVVPHVENLTRPTYALRSM-ELL 107
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-DVGA 122
I L R +PVI+AV+G IGGG+ L AADIR A+ A+F ++ GLTA ++G
Sbjct: 108 DDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGL 167
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182
LPR IG+ S EI T R + A EA GLVS+ D E LL + +A S
Sbjct: 168 SYLLPRAIGS-SRAFEIMLTGRDVSAEEAERIGLVSRQVPD-EQLLDACYAIAARMAGFS 225
Query: 183 PVAVQGTKKTLVFSRD------HAVEEGLNQV 208
++ TK+TL D H EGL Q+
Sbjct: 226 RPGIELTKRTLWSGLDAASLEAHMQAEGLGQL 257
>sp|O53163|ECH12_MYCTU Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis
GN=echA12 PE=3 SV=1
Length = 285
Score = 94.4 bits (233), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E +S + RV++L+ AG+ F+ G D + E++ R + LR +
Sbjct: 53 EALAQVSYDNSVRVVVLTGAGRGFSPGADHKS----AGVVPHVENLTRPTYALRSM-ELL 107
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-DVGA 122
I L R +PVI+AV+G IGGG+ L AADIR A+ A+F ++ GLTA ++G
Sbjct: 108 DDVILMLRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGL 167
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182
LPR IG+ S EI T R + A EA GLVS+ D E LL + +A S
Sbjct: 168 SYLLPRAIGS-SRAFEIMLTGRDVSAEEAERIGLVSRQVPD-EQLLDACYAIAARMAGFS 225
Query: 183 PVAVQGTKKTLVFSRD------HAVEEGLNQV 208
++ TK+TL D H EGL Q+
Sbjct: 226 RPGIELTKRTLWSGLDAASLEAHMQAEGLGQL 257
>sp|A8ALR7|CAID_CITK8 Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1
Length = 261
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+++ ++VNE+ T R+++A EA G+V+++ +++L+ A EL + +
Sbjct: 140 SGGVLRLPKLL-PPAIVNEMLMTGRRMDAEEALRWGIVNRVV-SQQALMDSARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEEG +
Sbjct: 198 NSAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|B5RGA4|CAID_SALG2 Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91
/ NCTC 13346) GN=caiD PE=3 SV=1
Length = 261
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D S L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGSGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|B5R1Q9|CAID_SALEP Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiD PE=3 SV=1
Length = 261
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D S L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGSGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|Q8Z9L5|CAID_SALTI Carnitinyl-CoA dehydratase OS=Salmonella typhi GN=caiD PE=3 SV=3
Length = 261
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSE-LMESARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|Q8ZRX5|CAID_SALTY Carnitinyl-CoA dehydratase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=caiD PE=3 SV=3
Length = 261
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSE-LMESARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|B4TWR3|CAID_SALSV Carnitinyl-CoA dehydratase OS=Salmonella schwarzengrund (strain
CVM19633) GN=caiD PE=3 SV=1
Length = 261
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSE-LMESARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|B4TIG9|CAID_SALHS Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476)
GN=caiD PE=3 SV=1
Length = 261
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSE-LMESARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|B4T6J5|CAID_SALNS Carnitinyl-CoA dehydratase OS=Salmonella newport (strain SL254)
GN=caiD PE=3 SV=1
Length = 261
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSE-LMESARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|Q8XA35|CAID_ECO57 Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3
SV=3
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ + RV I++ AG K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFN--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+I+ ++VNE+ T R++ A EA G+V+++ E L+ A EL + +
Sbjct: 140 SGGVLRLPKIL-PPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAE-LMDNARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEE + +
Sbjct: 198 NSAPLAIAALKEIYRTTSEMPVEESYSYI 226
>sp|B5BL54|CAID_SALPK Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain
AKU_12601) GN=caiD PE=3 SV=1
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|C0Q4L2|CAID_SALPC Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain
RKS4594) GN=caiD PE=3 SV=1
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|Q5PIL1|CAID_SALPA Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=caiD PE=3 SV=1
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|Q57TJ1|CAID_SALCH Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis (strain
SC-B67) GN=caiD PE=3 SV=1
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|B5F749|CAID_SALA4 Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483)
GN=caiD PE=3 SV=1
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|A9MYJ5|CAID_SALPB Carnitinyl-CoA dehydratase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=caiD PE=3 SV=1
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|B5FHG4|CAID_SALDC Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain
CT_02021853) GN=caiD PE=3 SV=1
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE F + ++ E RV I++ G K F+AG DL E D L
Sbjct: 34 MGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGLT 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ KPVI+AV+G GGG L AAD ++A F L E +G+ D
Sbjct: 89 EIFD--------LDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDS 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + RLP+++ ++VNE+ T R++ A EA G+V+++ E L+ A EL + + +
Sbjct: 141 GGVLRLPKLL-PPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSE-LMDSARELAQQLVN 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+P+A+ K+ + + VEEG +
Sbjct: 199 SAPLAIAALKEIYRATSEMPVEEGYRYI 226
>sp|P59395|CAID_SHIFL Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2
Length = 261
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ + RV I++ AG K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFN--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+I+ ++VNE+ T R++ A EA G+V+++ E L+ A EL + +
Sbjct: 140 SGGVLRLPKIL-PPTIVNEMVMTGRRMGAEEALRWGIVNRVVSQAE-LMDNARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEE +
Sbjct: 198 NSAPLAIAALKEIYRTTSEMPVEEAYRYI 226
>sp|P31551|CAID_ECOLI Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD
PE=1 SV=4
Length = 261
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ + RV I++ AG K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFN--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+I+ ++VNE+ T R++ A EA G+V+++ E L+ A EL + +
Sbjct: 140 SGGVLRLPKIL-PPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAE-LMDNARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEE +
Sbjct: 198 NSAPLAIAALKEIYRTTSEMPVEEAYRYI 226
>sp|B1IRE0|CAID_ECOLC Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=caiD PE=3 SV=1
Length = 261
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ + RV I++ AG K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFN--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+I+ ++VNE+ T R++ A EA G+V+++ E L+ A EL + +
Sbjct: 140 SGGVLRLPKIL-PPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAE-LMDNARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEE +
Sbjct: 198 NSAPLAIAALKEIYRTTSEMPVEEAYRYI 226
>sp|B1LFW9|CAID_ECOSM Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiD PE=3 SV=1
Length = 261
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ + RV I++ AG K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFN--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+I+ ++VNE+ T R++ A EA G+V+++ E L+ A EL + +
Sbjct: 140 SGGVLRLPKIL-PPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAE-LMDNARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEE +
Sbjct: 198 NSAPLAIAALKEIYRTTSEMPVEEAYRYI 226
>sp|Q8FLA6|CAID_ECOL6 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=caiD PE=3 SV=3
Length = 261
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ + RV I++ AG K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFN--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+I+ ++VNE+ T R++ A EA G+V+++ E L+ A EL + +
Sbjct: 140 SGGVLRLPKIL-PPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAE-LMDNARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEE +
Sbjct: 198 NSAPLAIAALKEIYRTTSEMPVEEAYRYI 226
>sp|Q0TLV3|CAID_ECOL5 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=caiD PE=3 SV=1
Length = 261
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F + ++ + RV I++ AG K F+AG DL E D L
Sbjct: 33 EMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAE-----GEAPDADFGPGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ KPVI+AV+G GGG L AAD +A F L E +G+ D
Sbjct: 88 TEIFN--------LDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+I+ ++VNE+ T R++ A EA G+V+++ E L+ A EL + +
Sbjct: 140 SGGVLRLPKIL-PPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAE-LMDNARELAQQLV 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
+ +P+A+ K+ + + VEE +
Sbjct: 198 NSAPLAIAALKEIYRTTSEMPVEEAYRYI 226
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 12 NEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSL 70
N R +IL+ G K F AG DL + L +ED +S ++ Q++ + L
Sbjct: 46 NSNIRCVILTGTGEKAFCAGADLKERIKL------KEDQVLES------VSLIQRTAALL 93
Query: 71 ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRII 130
+ P+PVI+A++G+ +GGG+ L A D+R AT+ A L E + + G QRLPR+I
Sbjct: 94 DALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETGLAIIPGAGGTQRLPRLI 153
Query: 131 GNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTK 190
G + E +T R++ A EA+E GLV + + L+ A EL I++ P+AV+ K
Sbjct: 154 G-RGKAKEFIYTGRRVTAHEAKEIGLVEHVTAPCD-LMPKAEELAAAISANGPIAVRQAK 211
>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis
elegans GN=ech-6 PE=1 SV=1
Length = 288
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + L ++ I+++ + + F AG D+ M + +
Sbjct: 66 ELADALEVLDTDKSVGAIVITGSERAFAAGADIKEMTN------------------NEFA 107
Query: 61 TTYQKSI----SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL 116
TT+ S +++ KPVI+AV+G +GGG L DI YA + A F E++IG
Sbjct: 108 TTFSGSFLSNWTAVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGT 167
Query: 117 TADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QR R G +S E+ T + A EA+E G+VSK++ + ++ A++LGE
Sbjct: 168 IPGAGGTQRWARAAG-KSFAMEVCLTGNHVTAQEAKEHGIVSKIF-PADQVVGEAVKLGE 225
Query: 177 LIASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
IA +SP+ VQ K+ + + + ++EGL+
Sbjct: 226 KIADQSPLIVQMAKEAVNKAYELTLQEGLH 255
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + E+ I+L+ K F AG D+ M Q ++ Q+ + K
Sbjct: 68 ELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEM----QNLSFQDCYSSK-------- 115
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ K L + KPVI+AV+G GGG L DI YA + A F E+ IG
Sbjct: 116 --FLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGA 173
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G +SL E+ T +I A +A++ GLVSK+ E+L+ AI+ E IAS
Sbjct: 174 GGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKIC-PVETLVEEAIQCAEKIAS 231
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEG 204
S + V K+++ + + + EG
Sbjct: 232 NSKIVVAMAKESVNAAFEMTLTEG 255
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 32/213 (15%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + E+ I+L+ K+F AG D+ M SL
Sbjct: 68 ELNQALQAFEEDPAVGAIVLTGGEKVFAAGADIKEMQSL--------------------- 106
Query: 61 TTYQKSIS--------SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 112
T+Q S L R KPVI+AV+G +GGG L DI YA + A F E+
Sbjct: 107 -TFQNCYSGGFLSHWDQLTRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEI 165
Query: 113 DIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
IG G QRL R +G +SL E+ T +I A +A++ GLVSK++ E+++ AI
Sbjct: 166 LIGTIPGAGGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKIF-PVETVVEEAI 223
Query: 173 ELGELIASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ E IAS S + K+++ + + + EG+
Sbjct: 224 QCAEKIASNSKIVTAMAKESVNAAFEMTLAEGV 256
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F ++ RV I++ AG + F AG DL E D + L
Sbjct: 33 EMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLKAAAE-----GEAPDADFGAGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ + KPVI+A++G GGG L AAD+ + +A F L E +G+ D
Sbjct: 88 TELFDLN--------KPVIAAINGYAFGGGFELALAADMIICSDNASFALPEAQLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+ + ++VNE+ T R++ A EA G+ +++ E L+ A EL + IA
Sbjct: 140 SGGVLRLPKRL-PPAIVNEMLMTGRRMNAQEALRWGIANRVVSATE-LMDSARELADQIA 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEG 204
+ +P+AV K+ + + ++EEG
Sbjct: 198 NSAPLAVAALKEIYRATSELSIEEG 222
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+GE F ++ RV I++ AG + F AG DL E D + L
Sbjct: 33 EMGEVFMRFRDDPSLRVAIITGAGERFFCAGWDLKAAAE-----GEAPDADFGAGGFAGL 87
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ + KPVI+A++G GGG L AAD+ + +A F L E +G+ D
Sbjct: 88 TELFDLN--------KPVIAAINGYAFGGGFELALAADMIICSDNASFALPEAQLGIVPD 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G + RLP+ + ++VNE+ T R++ A EA G+ +++ E L+ A EL + IA
Sbjct: 140 SGGVLRLPKRL-PPAIVNEMLMTGRRMNAQEALRWGIANRVVSATE-LMDSARELADQIA 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEG 204
+ +P+AV K+ + + ++EEG
Sbjct: 198 NSAPLAVAALKEIYRATSELSIEEG 222
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 17/210 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++ ++ I+L+ K F AG D I E ++ + K +
Sbjct: 68 ELNQALETFEQDPAVGAIVLTGGDKAFAAGAD----------IKEMQNRTFQDCYSSKFL 117
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + + R KPVI+AV+G +GGG L DI YA + A F E+ +G
Sbjct: 118 SHW----DHITRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGA 173
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G +SL E+ T +I A +A++ GLVSK++ E L+ AI+ E IAS
Sbjct: 174 GGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKIF-PVEKLVEEAIQCAEKIAS 231
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDK 210
S + V K+++ + + + EG N+++K
Sbjct: 232 NSKIVVAMAKESVNAAFEMTLTEG-NKLEK 260
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 17/211 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++ E+ I+L+ K F AG D I E ++ + K +
Sbjct: 68 ELNQALETFEEDPAVGAIVLTGGEKAFAAGAD----------IKEMQNRTFQDCYSGKFL 117
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + + R KPVI+AV+G +GGG L DI YA + A F E+ +G
Sbjct: 118 SHW----DHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGA 173
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G +SL E+ T +I A +A++ GLVSK++ E+L+ AI+ E IA+
Sbjct: 174 GGTQRLTRAVG-KSLAMEMVLTGDRISAQDAKQAGLVSKIF-PVETLVEEAIQCAEKIAN 231
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKE 211
S + V K+++ + + + EG N+++K+
Sbjct: 232 NSKIIVAMAKESVNAAFEMTLTEG-NKLEKK 261
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + E+ I+L+ K F AG D+ M Q ++ Q+ + K
Sbjct: 68 ELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEM----QNLSFQDCYSSK-------- 115
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ K L + KPVI+AV+G GGG L DI YA + A F E+ IG
Sbjct: 116 --FLKHWDHLTQIKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGA 173
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G +SL E+ T +I A +A++ GLVSK+ E+L+ AI+ E IAS
Sbjct: 174 GGTQRLTRTVG-KSLAMEMVLTGDRISAQDAKQAGLVSKIC-PVETLVEEAIQCAEKIAS 231
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEG 204
S + K+++ + + + EG
Sbjct: 232 NSKIIAAMAKESVNAAFEMTLAEG 255
>sp|Q869N6|CRTL_DICDI 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial
OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1
Length = 299
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 11/190 (5%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
+ D+L+E+++ + ++L+ GK F+AG DL ++ ++ E ++++ +
Sbjct: 69 KVVDTLAEDKDLKCVVLTGEGKAFSAGGDLDFLIERTKDTPENN---------QRIMERF 119
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGAL 123
++ + P P+ISA++GA IG G L A DIR + A L +G+ +G
Sbjct: 120 YRTFLYIRSLPVPIISAINGAAIGAGFCLALATDIRVVSNKAPVGLTFTKLGIHPGMGVT 179
Query: 124 QRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSP 183
+ I+G Q + + + ++ I+ EA+ GLV K + + +L A+ L E I+ S
Sbjct: 180 HSITNIVG-QDVASYMLLSSDIIKGDEAQRLGLVLKSVES-DQVLPTALNLAETISKNST 237
Query: 184 VAVQGTKKTL 193
+AV T KTL
Sbjct: 238 IAVNSTTKTL 247
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 17/191 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGK-IFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ E L E+++ RV++ +A K +F AG DL +E + DV + + R
Sbjct: 67 ELLEALAQLREDQQVRVLLFRSAVKGVFCAGADL-------KEREQMSDVEVGTFVQR-- 117
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ +S + P P I+A+ G +GGG+ L A D+R A A L E GL
Sbjct: 118 ---LRGLMSEIAAFPVPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPG 174
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAG---AIELGE 176
G QRLPR +G +L E+ FT R++ A+ARE GLV+ E A A+ L +
Sbjct: 175 AGGTQRLPRCLG-VALAKELIFTGRRLNGAQARELGLVNHAVAQNEEGNAAYHRALALAQ 233
Query: 177 LIASKSPVAVQ 187
I ++P+AV+
Sbjct: 234 EILPQAPIAVR 244
>sp|P94549|FADB_BACSU Probable enoyl-CoA hydratase OS=Bacillus subtilis (strain 168)
GN=fadB PE=2 SV=1
Length = 258
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ C D + R II+ G+ F+AG D+ SL ED + L
Sbjct: 32 ELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSL----KGNEDSSL-------LA 80
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q+ + +E PKP+I+A+HGA +GGG+ L A IR A +DA L E+++G+
Sbjct: 81 ERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGF 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
QRLPR +G + E+ + I EA + GLVS D+ ++ A L A
Sbjct: 141 AGTQRLPRYVGTAKAL-ELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAE 199
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGV 225
KSP + + L ++ ++ E L K + + +G+
Sbjct: 200 KSPQTLASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGI 244
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 16/179 (8%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ L EN+E R V+ +SA F AG D++ M+ + E E +AR+
Sbjct: 38 QVRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAEVLARQG------ 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA--WFTLKEVDIGLT 117
Q+ ++ + P PVI+A+HGAC+GGG+ L A R T DA L EV +GL
Sbjct: 91 ----QQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLL 146
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QRLPR+IG + + E+ T +++ A +A + GLV + + LL A+EL +
Sbjct: 147 PGSGGTQRLPRLIGVSTAL-EMILTGKQLRAKQALKLGLVDDVV-PQSILLEAAVELAK 203
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 16/179 (8%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ L EN+E R V+ +SA F AG D++ M+ + E E +AR+
Sbjct: 38 QVRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNCKTAQEAEVLARQG------ 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA--WFTLKEVDIGLT 117
Q+ ++ + P PVI+A+HGAC+GGG+ L A R T DA L EV +GL
Sbjct: 91 ----QQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLL 146
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QRLPR+IG + + E+ T +++ A +A + GLV + + LL A+EL +
Sbjct: 147 PGSGGTQRLPRLIGVSTAL-EMILTGKQLRAKQALKLGLVDDVV-PQSILLEAAVELAK 203
>sp|P76082|PAAF_ECOLI 2,3-dehydroadipyl-CoA hydratase OS=Escherichia coli (strain K12)
GN=paaF PE=1 SV=1
Length = 255
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 16/191 (8%)
Query: 17 VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKP 76
V +++ + F AG DL+ E+AE++ A L T + + L+ KP
Sbjct: 49 VCVITGNARFFAAGADLN-------EMAEKDLAA-------TLNDTRPQLWARLQAFNKP 94
Query: 77 VISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLV 136
+I+AV+G +G G L D+ A ++A F L E+ +G+ G QRL R +G +SL
Sbjct: 95 LIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVG-KSLA 153
Query: 137 NEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLVFS 196
+++ + I A +A++ GLVS ++ + L A++L +A SP+A+Q K+ L S
Sbjct: 154 SKMVLSGESITAQQAQQAGLVSDVFPSDLT-LEYALQLASKMARHSPLALQAAKQALRQS 212
Query: 197 RDHAVEEGLNQ 207
++ A++ GL Q
Sbjct: 213 QEVALQAGLAQ 223
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ L EN+E R V+ +SA F AG D++ M+ + E E +AR+
Sbjct: 38 QVRAIIKQLRENKELRGVVFVSAKPDNFIAGADIN-MIGNCKTAQEAEALARQG------ 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLT 117
Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D L EV +GL
Sbjct: 91 ----QQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRMCTDDPKTVLGLPEVQLGLL 146
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QRLPR+IG + + E+ T +++ A +A + GLV + + LL A+EL +
Sbjct: 147 PGSGGTQRLPRLIGVSTAL-EMILTGKQLRAKQALKLGLVDDVV-PQSILLEAAVELAK 203
>sp|Q31YB7|FADJ_SHIBS Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 4 (strain Sb227) GN=fadJ PE=3 SV=1
Length = 714
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ L EN+E R V+ +SA F AG D++ M+ + + E E +AR+
Sbjct: 38 QVRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTVQEAEALARQG------ 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLT 117
Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D L EV +GL
Sbjct: 91 ----QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLL 146
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QRLPR+IG + + E+ T +++ A +A + GLV + LL A+EL +
Sbjct: 147 PGSGGTQRLPRLIGVSTTL-EMILTGKQLRAKQALKLGLVDDVV-PHSILLEVAVELAK 203
>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O9:H4 (strain HS) GN=fadJ PE=3 SV=1
Length = 714
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ L EN+E R V+ +SA F AG D++ M+ + E E +AR+
Sbjct: 38 QVRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAEALARQG------ 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLT 117
Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D L EV +GL
Sbjct: 91 ----QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLL 146
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QRLPR+IG + + E+ T +++ A +A + GLV + LL A+EL +
Sbjct: 147 PGSGGTQRLPRLIGVSTAL-EMILTGKQLRAKQALKLGLVDDVV-PHSILLEAAVELAK 203
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ L EN+E R V+ +SA F AG D++ M+ + E E +AR+
Sbjct: 38 QVRAIIKQLRENKELRGVVFISAKPDNFIAGADIN-MIGNCKTAQEAEALARQG------ 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLT 117
Q+ ++ + P PVI+A+HGAC+GGG+ L A R T D L EV +GL
Sbjct: 91 ----QQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLL 146
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QRLPR+IG + + E+ T +++ A +A + GLV + LL A+EL +
Sbjct: 147 PGSGGTQRLPRLIGVSTAL-EMILTGKQLRAKQALKLGLVDDVV-PHSILLEAAVELAK 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,425,668
Number of Sequences: 539616
Number of extensions: 3815437
Number of successful extensions: 10431
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 9738
Number of HSP's gapped (non-prelim): 442
length of query: 275
length of database: 191,569,459
effective HSP length: 116
effective length of query: 159
effective length of database: 128,974,003
effective search space: 20506866477
effective search space used: 20506866477
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)