RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy14406
(275 letters)
>gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional.
Length = 272
Score = 259 bits (665), Expect = 6e-87
Identities = 100/208 (48%), Positives = 144/208 (69%), Gaps = 2/208 (0%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ E F L + E R ++LS +GK F+ G+DL M + ++ ++ +AR LR+ I
Sbjct: 37 ELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLG-KDGLARPRTDLRREI 95
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q +I+++ C KPVI+AV G CIGGG+ LI+A D+RYA+ DA F+++EVD+G+ ADV
Sbjct: 96 LRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADV 155
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G+LQRLPRIIG+ L E+A T R I+AAEA + GLV+++YDD ++LLA A IA+
Sbjct: 156 GSLQRLPRIIGDGHL-RELALTGRDIDAAEAEKIGLVNRVYDDADALLAAAHATAREIAA 214
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSP+AV+GTK+ L + RDH V +GL V
Sbjct: 215 KSPLAVRGTKEVLDYMRDHRVADGLRYV 242
>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA
hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase.
Length = 275
Score = 197 bits (503), Expect = 2e-62
Identities = 96/208 (46%), Positives = 143/208 (68%), Gaps = 2/208 (0%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E + SL +N VIILS AG F +G+DL + S+ ++ + D R + LR+ I
Sbjct: 39 EFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQ-SSSGDRGRSGERLRRKI 97
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q +I+++E+C KPVI+A+HGACIGGG+ ++TA DIRY ++DA+F++KEVD+ +TAD+
Sbjct: 98 KFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADL 157
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LQRLP I+G + + E+A T R+ +EA+E GLVS+++ KE L G + E IA+
Sbjct: 158 GTLQRLPSIVGYGNAM-ELALTGRRFSGSEAKELGLVSRVFGSKEDLDEGVRLIAEGIAA 216
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
KSP+AV GTK L+ SR+ +VE+GL+ V
Sbjct: 217 KSPLAVTGTKAVLLRSRELSVEQGLDYV 244
>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase
superfamily. This superfamily contains a diverse set of
enzymes including enoyl-CoA hydratase, napthoate
synthase, methylmalonyl-CoA decarboxylase,
3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA
isomerase. Many of these play important roles in fatty
acid metabolism. In addition to a conserved structural
core and the formation of trimers (or dimers of
trimers), a common feature in this superfamily is the
stabilization of an enolate anion intermediate derived
from an acyl-CoA substrate. This is accomplished by two
conserved backbone NH groups in active sites that form
an oxyanion hole.
Length = 195
Score = 173 bits (441), Expect = 5e-54
Identities = 72/178 (40%), Positives = 98/178 (55%), Gaps = 12/178 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ D + + RV++L+ AGK F AG DL + +L E R I
Sbjct: 30 ELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGEE----------ARAFI 79
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q+ + +L R PKPVI+AV+GA +GGG+ L A DIR A +DA F L EV +GL
Sbjct: 80 RELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGG 139
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G QRLPR++G + E+ T R+I A EA E GLV ++ D E LLA A+EL +
Sbjct: 140 GGTQRLPRLVG-PARARELLLTGRRISAEEALELGLVDEVVPD-EELLAAALELARRL 195
>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid
metabolism].
Length = 257
Score = 163 bits (414), Expect = 2e-49
Identities = 77/205 (37%), Positives = 110/205 (53%), Gaps = 13/205 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ E D + + RV++L+ AGK F+AG DL +LS A + + +LR L
Sbjct: 36 ELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAENLMQPGQDLLRAL- 94
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
PKPVI+AV+G +GGG+ L A DIR A +DA F L EV++GL
Sbjct: 95 ----------ADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGD 144
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRLPR++G + E+ T I AAEA E GLV ++ D E LL A+EL +A
Sbjct: 145 GGTQRLPRLLG-RGRAKELLLTGEPISAAEALELGLVDEVVPDAEELLERALELARRLA- 202
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
P+A+ TK+ + + + + E L
Sbjct: 203 APPLALAATKRLVRAALEADLAEAL 227
>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family. This family
contains a diverse set of enzymes including: Enoyl-CoA
hydratase. Napthoate synthase. Carnitate racemase.
3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA
delta-isomerase.
Length = 245
Score = 142 bits (359), Expect = 3e-41
Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + + L ++ + I+L+ F+AG D+ M + Q+
Sbjct: 29 ELIQALEKLEQDPSVKAIVLTGGPGAFSAGADIKEMAAEPLA---QQAQFSL-------- 77
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q S LE PKPVI+AV+G +GGG+ L A D R A +A F L EV +G+
Sbjct: 78 -EAQDLWSRLEDLPKPVIAAVNGYALGGGLELALACDYRIAADNAKFGLPEVKLGIIPGA 136
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRLPRIIG S E+ T R+I A EA + GLV K+ +E L+ AIEL + +A
Sbjct: 137 GGTQRLPRIIG-VSAALEMLLTGRRIRAQEALKMGLVDKV-VPEEQLVEEAIELAQRLAD 194
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQV 208
K P+A+ K + + + A+ E Q
Sbjct: 195 KPPLALAALKAAMRAALEDALPEVRAQA 222
>gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional.
Length = 257
Score = 137 bits (348), Expect = 2e-39
Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 16/213 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ E D + +++ RV+++ G+ F+AG D+ S+ E + ++A+
Sbjct: 32 ELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSV-TEAEQATELAQLG------- 83
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q + +E+ KPVI+A+HGA +GGG+ L + IR+AT+ A L E+++GL
Sbjct: 84 ---QVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGF 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
QRLPR +G + E+ T+ I AEA + GLV+ ++ + E+LL A +L + IA
Sbjct: 141 AGTQRLPRYVGKAKAL-EMMLTSEPITGAEALKWGLVNGVFPE-ETLLDDAKKLAKKIAG 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESK 213
KSP + + L ++ + EG V +E+K
Sbjct: 199 KSPATTRAVLELLQTTKSSSYYEG---VKREAK 228
>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional.
Length = 259
Score = 119 bits (302), Expect = 1e-32
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLIT 61
+ + ++ + + RV++L+ AG+ F+AG D+ + ++ +A ++ LR
Sbjct: 37 LADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPKPPDE--LAPVNRFLRA--- 91
Query: 62 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVG 121
I++L PKPV++AV+G +G G+SL A D+ YA++ A F+L +GL D G
Sbjct: 92 -----IAAL---PKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAG 143
Query: 122 ALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181
LPR+IG E+ + A EA GLV+++ E L A A +A+
Sbjct: 144 GSALLPRLIGRAR-AAEMLLLGEPLSAEEALRIGLVNRVVPAAE-LDAEADAQAAKLAAG 201
Query: 182 SPVAVQGTKKTLVFSRDHAVEEGL 205
A++ TK+ + + +EE L
Sbjct: 202 PASALRYTKRAINAATLTELEEAL 225
>gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional.
Length = 257
Score = 118 bits (297), Expect = 5e-32
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 15/193 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ FD +SE + RV++L+ AGK+F AG DL G + + + R+++
Sbjct: 34 ELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIKGPGDLRAHNRRTR------ 87
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ ++ C KPVI+AV+G +G G+ L+ + DI A+++A F L E+D+GL
Sbjct: 88 ----ECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGL---A 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G + R+ G SL + T ++ AAE G++ E L+ A+E+ IAS
Sbjct: 141 GGGKHAMRLFG-HSLTRRMMLTGYRVPAAELYRRGVIEACL-PPEELMPEAMEIAREIAS 198
Query: 181 KSPVAVQGTKKTL 193
KSP+A + K L
Sbjct: 199 KSPLATRLAKDAL 211
>gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 117 bits (295), Expect = 1e-31
Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ L ++ R +ILS G F AGLD+ VA KL+
Sbjct: 34 ELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVK-------------SVASSPGNAVKLL 80
Query: 61 TTYQKSISSL--------ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 112
++L R P PVI+A+ G C GGG+ + ADIR A D ++ E
Sbjct: 81 FKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEA 140
Query: 113 DIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
GL D+ L ++ + + E+ +TAR A EA E GLV+ + DD LA A+
Sbjct: 141 KWGLVPDMAGTVSLRGLVR-KDVARELTYTARVFSAEEALELGLVTHVSDDP---LAAAL 196
Query: 173 ELGELIASKSPVAVQGTKKTL 193
L IA +SP A+ K+ +
Sbjct: 197 ALAREIAQRSPDAIAAAKRLI 217
>gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 112 bits (281), Expect = 1e-29
Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 50/254 (19%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDL---SGMLSLGQEIAEQEDVARKSKIL 56
E+ ++E RV+IL+ AG K F AG DL +GM +E V
Sbjct: 35 ELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM--------NEEQV------- 79
Query: 57 RKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL 116
R ++ + ++ +E+ P+PVI+A++G +GGG+ L A D R A + A L E + +
Sbjct: 80 RHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAI 139
Query: 117 TADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G QRLPR+IG E+ +T R+I A EA+E GLV + L AIE+ E
Sbjct: 140 IPGAGGTQRLPRLIG-VGRAKELIYTGRRISAQEAKEIGLVEFVV-PAHLLEEKAIEIAE 197
Query: 177 LIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCDRRNCNKGVSPERMSHDCPE 236
IAS P+AV+ K+ A+ G+ QVD + G+ E+ +++
Sbjct: 198 KIASNGPIAVRQAKE--------AISNGI-QVDLHT-----------GLQIEKQAYE--- 234
Query: 237 CLIGSIGVFHTLDR 250
G T DR
Sbjct: 235 ------GTIPTKDR 242
>gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 110 bits (277), Expect = 5e-29
Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 27/212 (12%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQED-VARKSKILRK 58
+ E ++++ + R ++L AG K F AG D++ + + ED VA + +I R
Sbjct: 39 GLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQF----RAFSTAEDAVAYERRIDR- 93
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWF------TLKEV 112
+ +LE+ P I+A+ GAC+GGG ++ A D+R AT A F TL
Sbjct: 94 -------VLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTL--- 143
Query: 113 DIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
G + L RL ++G V ++ FTAR +EA EA GLV+++ +D +L A A
Sbjct: 144 --GNCLSMSNLARLVALLGAAR-VKDMLFTARLLEAEEALAAGLVNEVVED-AALDARAD 199
Query: 173 ELGELIASKSPVAVQGTKKTLVFSRDHAVEEG 204
L EL+A+ +P+ ++ TK+ L R + +G
Sbjct: 200 ALAELLAAHAPLTLRATKEALRRLRREGLPDG 231
>gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional.
Length = 261
Score = 110 bits (276), Expect = 6e-29
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E F LSE+ + R I+L+ K+F AG D+ + G I Y
Sbjct: 42 EHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATAGA------------------IEMY 83
Query: 64 QKSI----SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ ++ +CPKPVI+AV+G +GGG L ADI A + A F E+ +GL
Sbjct: 84 LRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPG 143
Query: 120 VGALQRLPRIIGN-QSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G QRL R +G +++ +A T + A EA GLVS++ +D E L A+EL I
Sbjct: 144 AGGTQRLVRAVGKFKAM--RMALTGCMVPAPEALAIGLVSEVVED-EQTLPRALELAREI 200
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEGL 205
A P+A+ K+ ++ D ++ L
Sbjct: 201 ARMPPLALAQIKEVVLAGADAPLDAAL 227
>gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 110 bits (276), Expect = 9e-29
Identities = 66/208 (31%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRK 58
E+ F +L ++ R ++L+ AGK F AG DL+ M + ++ D R + +LR
Sbjct: 35 ELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYSDDENRADARRLADMLR- 93
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL-T 117
++ RCPKPVI+ VHG GGM L+ A DI A A F L EV +GL
Sbjct: 94 ----------AIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIP 143
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
A + + R +G + TA + +AAEA GLV ++ E+L A EL
Sbjct: 144 ATISPY--VIRAMGER-AARRYFLTAERFDAAEALRLGLVHEVV-PAEALDAKVDELLAA 199
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEEGL 205
+ + SP AV+ K+ + ++ L
Sbjct: 200 LVANSPQAVRAGKRLVRDVAGRPIDAAL 227
>gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated.
Length = 260
Score = 109 bits (273), Expect = 2e-28
Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 15/191 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ D + ++ +IL+ AG K F AG D+S M +++ E+E RK +L
Sbjct: 35 ELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEM----KDLNEEE--GRKFGLLG-- 86
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
K LE KPVI+A++G +GGG L A DIR A++ A F EV +G+T
Sbjct: 87 ----NKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPG 142
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G QRL RI+G E+ +T I A EA GLV+K+ + E L+ A L IA
Sbjct: 143 FGGTQRLARIVG-PGKAKELIYTGDMINAEEALRIGLVNKVV-EPEKLMEEAKALANKIA 200
Query: 180 SKSPVAVQGTK 190
+ +P+AV+ K
Sbjct: 201 ANAPIAVKLCK 211
>gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional.
Length = 261
Score = 106 bits (266), Expect = 2e-27
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDL---------SGMLSLGQEIAEQEDVA 50
+GE F + ++ E RV I++ AG K F+AG DL G E
Sbjct: 33 AMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTE--- 89
Query: 51 RKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLK 110
+ L KPVI+AV+G GGG L AAD +A F L
Sbjct: 90 -----IFDL--------------DKPVIAAVNGYAFGGGFELALAADFIVCADNASFALP 130
Query: 111 EVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAG 170
E +G+ D G + RLP+ + ++ NE+ T R+++A EA G+V+++ + L+
Sbjct: 131 EAKLGIVPDSGGVLRLPKRL-PPAIANEMVMTGRRMDAEEALRWGIVNRVV-PQAELMDR 188
Query: 171 AIELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDK 210
A EL + + + +P+A+ K+ + + VEE +
Sbjct: 189 ARELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRS 228
>gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional.
Length = 249
Score = 105 bits (263), Expect = 4e-27
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + + + + RV++L A G+ F AG+D+ +E+ R
Sbjct: 32 ALADAITAAGADPDTRVVVLRAEGRGFNAGVDI-------KELQATPGFTALIDANRGCF 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ ++ C PVI+AVHG C+GGG+ L+ AD+ A+ DA F L EVD G +
Sbjct: 85 AAF----RAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGA---L 137
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA L R++ Q L+ + FTA I AAE G V ++ ++ L A+E+ IA+
Sbjct: 138 GAATHLQRLVP-QHLMRALFFTAATITAAELHHFGSVEEVV-PRDQLDEAALEVARKIAA 195
Query: 181 KSPVAVQGTKKTL 193
K ++ K+ L
Sbjct: 196 KDTRVIRAAKEAL 208
>gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional.
Length = 263
Score = 104 bits (260), Expect = 2e-26
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS--LGQEIAE-QEDVARKSKILRKLI 60
+ +D + + + R IL+ AG F AG+DL G + D +R +L+
Sbjct: 39 DAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKG-- 96
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
R KP+I+AV G I GG ++ DIR A + A F + E L
Sbjct: 97 ----------RRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMG 146
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G+ RL R I ++ ++ T R I AAEA+E GL+ + D ++ L A+EL ELI +
Sbjct: 147 GSAVRLVRQI-PYTVACDLLLTGRHITAAEAKEIGLIGHVVPDGQA-LDKALELAELINA 204
Query: 181 KSPVAVQGTKKTL 193
P+AVQ +T+
Sbjct: 205 NGPLAVQAILRTI 217
>gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional.
Length = 276
Score = 103 bits (259), Expect = 2e-26
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 14/212 (6%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E +S + RV++L+ AG+ F++G D + E + R + LR +
Sbjct: 44 EALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGV----VPHVEGLTRPTYALRSM-ELL 98
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA-DVGA 122
I +L R +PVI+AV+G IGGG+ L AADIR A+ A+F ++ GLTA ++G
Sbjct: 99 DDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGL 158
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182
LPR IG+ S EI T R ++A EA GLVS+ D E LL + +A S
Sbjct: 159 SYLLPRAIGS-SRAFEIMLTGRDVDAEEAERIGLVSRQVPD-EQLLDTCYAIAARMAGFS 216
Query: 183 PVAVQGTKKTLVFSRD------HAVEEGLNQV 208
++ TK+TL D H EGL Q+
Sbjct: 217 RPGIELTKRTLWSGLDAASLEAHMQAEGLGQL 248
>gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional.
Length = 254
Score = 101 bits (255), Expect = 6e-26
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 2 IGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLIT 61
+ D L + + V IL+ AG F AG+DL + +
Sbjct: 35 LAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFA------------RGERPSIPG--- 79
Query: 62 TYQKSISSLERCP--KPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ L P KP+I+AV G + GG L A D+ A +DA F L EV GL A
Sbjct: 80 ---RGFGGLTERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAA 136
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G L RLPR I + E+A T + A A E GLV++L + ++ L A+EL E IA
Sbjct: 137 GGGLLRLPRRIPYH-IAMELALTGDMLTAERAHELGLVNRLTEPGQA-LDAALELAERIA 194
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEE 203
+ P+AV +K+ +V S D + +E
Sbjct: 195 ANGPLAVAASKRIVVESGDWSEDE 218
>gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional.
Length = 266
Score = 101 bits (254), Expect = 1e-25
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ +++ + R +IL+ AG F++G ++ M A +R
Sbjct: 35 ALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMR------ARVGAFGGSPADIR--- 85
Query: 61 TTYQKSIS----SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL 116
Y+ I +L PVI+AV+G IG G L DIR A++ A F V +GL
Sbjct: 86 QGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGL 145
Query: 117 TADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G LPRIIG + E+AFT I+AA A E GLVS++ + LL A L E
Sbjct: 146 IPGDGGAWLLPRIIGM-ARAAEMAFTGDAIDAATALEWGLVSRVVPA-DQLLPAARALAE 203
Query: 177 LIASKSPVAVQGTKKTL 193
IA+ P A++ TK+ L
Sbjct: 204 RIAANPPHALRLTKRLL 220
>gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional.
Length = 266
Score = 99.4 bits (248), Expect = 9e-25
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 1 EIGECFDSLSENE-ECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
+ E D++ + + E R ++L+ AG+ F G +L G S G+E D L
Sbjct: 35 GLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGGDAGAA------L 88
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
T Y + L P P+++AV+G G GMS D+ + A+F IGL D
Sbjct: 89 ETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPD 148
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G+ LPR++G + E++ K+ A A + GLV+++ DD E L+A A++L +A
Sbjct: 149 GGSTWLLPRLVGKARAM-ELSLLGEKLPAETALQWGLVNRVVDDAE-LMAEAMKLAHELA 206
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEEGLN 206
+ VA+ +K S ++ EE LN
Sbjct: 207 NGPTVALGLIRKLYWDSPENDFEEQLN 233
>gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional.
Length = 272
Score = 98.6 bits (246), Expect = 2e-24
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ D + RVI+L+ AG+ F AG D+ + ++ ++ R R+
Sbjct: 37 EVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRDTDVRPFVGNRR-- 94
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
YQ L KPVI+A++GAC G G++ D+R+A A FT GL A+
Sbjct: 95 PDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEH 154
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G LPR++G+ + + ++ +AR A EA GLV+++ E L+ + E +A
Sbjct: 155 GISWILPRLVGHANAL-DLLLSARTFYAEEALRLGLVNRVVPPDE-LMERTLAYAEDLAR 212
Query: 181 K-SPVAVQGTKKTL 193
SP ++ K+ L
Sbjct: 213 NVSPASMAVIKRQL 226
>gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional.
Length = 259
Score = 98.2 bits (245), Expect = 2e-24
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ E FD + + E V I++ AG K F+AG DL + G+ +
Sbjct: 35 ELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGKRGWPESGFG--------- 85
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
++S KP+I+AV+G +GGG L A D+ A ++A F L E +GL A
Sbjct: 86 ------GLTSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAAL 139
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIA 179
G L RLPR IG + + I T R++ A E E G V+++ E LLA A + I
Sbjct: 140 AGGLHRLPRQIGLKRAMGMI-LTGRRVTAREGLELGFVNEVVPAGE-LLAAAERWADDIL 197
Query: 180 SKSPVAVQGTKKTLVFSRDHAVEE 203
+ SP++++ +K+ + + ++EE
Sbjct: 198 ACSPLSIRASKQAVYRGLEVSLEE 221
>gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional.
Length = 255
Score = 97.8 bits (244), Expect = 3e-24
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ F L E R ++L G F AGLDLS E+ E++ R
Sbjct: 33 ALRAAFARLPE--GVRAVVLHGEGDHFCAGLDLS-------ELRERDAGEGMHHSRR--- 80
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + ++ PVI+A+HGA +GGG+ L +AA IR A + +F L E G+
Sbjct: 81 --WHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGG 138
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G R+PR+IG + + ++ T R +A E GL L E+ L A+EL IA
Sbjct: 139 GGSVRVPRLIG-VARMTDMMLTGRVYDAQEGERLGLAQYLVPAGEA-LDKAMELARRIAQ 196
Query: 181 KSPVA 185
+P+
Sbjct: 197 NAPLT 201
>gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional.
Length = 255
Score = 97.1 bits (242), Expect = 4e-24
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 16/207 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ ++ + + V +++ + F AG DL E+AE++ A L
Sbjct: 33 QLVNELEAAATDTSIGVCVITGNARFFAAGADL-------NEMAEKDLAA----TLNDPR 81
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ + + KP+I+AV+G +G G L DI A ++A F L E+ +G+
Sbjct: 82 PQLWQRLQAFN---KPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGA 138
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G +SL +++ T I A +A++ GLVS+++ E L A++L IA
Sbjct: 139 GGTQRLIRSVG-KSLASQMVLTGESITAQQAQQAGLVSEVFPP-ELTLERALQLASKIAR 196
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGLNQ 207
SP+A++ K+ L S++ ++ GL Q
Sbjct: 197 HSPLALRAAKQALRQSQEVDLQAGLAQ 223
>gnl|CDD|180625 PRK06563, PRK06563, enoyl-CoA hydratase; Provisional.
Length = 255
Score = 96.6 bits (241), Expect = 8e-24
Identities = 66/200 (33%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 9 LSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSIS 68
++E RV +L A G+ FTAGLDL+ DVA K+ + I
Sbjct: 38 YEADDELRVAVLFAHGEHFTAGLDLA-------------DVA--PKLAAGGFPFPEGGID 82
Query: 69 SL----ERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQ 124
R KP++ AV G C+ G+ L+ AADI A + F EV G+ GA
Sbjct: 83 PWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATL 142
Query: 125 RLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPV 184
R P+ G + + + T + +A EA GLV ++ E L AIEL E IA +P+
Sbjct: 143 RFPQAAGWGNAMRYL-LTGDEFDAQEALRLGLVQEVVPPGE-QLERAIELAERIARAAPL 200
Query: 185 AVQGTKKTLVFSRDHAVEEG 204
VQ T + +R AV EG
Sbjct: 201 GVQATLAS---ARA-AVREG 216
>gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional.
Length = 269
Score = 96.7 bits (241), Expect = 9e-24
Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 2 IGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + + +++ RV++L+ AG K F +G D+S + ++ E VA + +
Sbjct: 43 LPQALAAAEDDDAIRVVVLTGAGEKAFVSGADIS---QFEESRSDAEAVAAYEQA----V 95
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q +++ KP I+ + G CIGGGM + A DIR A +D+ F + +GL
Sbjct: 96 EAAQAALAD---YAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGY 152
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
++ L ++G S ++ +TAR+ +AAEA GLV ++ + L + IA
Sbjct: 153 DGVKNLVDLVG-PSAAKDLFYTARRFDAAEALRIGLVHRVTAADD-LETALADYAATIAG 210
Query: 181 KSPVAVQGTKKTLV 194
+P+ ++ K+ +
Sbjct: 211 NAPLTLRAAKRAIA 224
>gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 96.0 bits (239), Expect = 1e-23
Identities = 68/205 (33%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 4 ECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITT 62
D++ +E R +IL+ AG + F+AG D+ +A DVA LR +
Sbjct: 37 ARLDAIEVDESVRAVILTGAGDRAFSAGADIHE---FSASVAAGADVA-----LRDFVRR 88
Query: 63 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA 122
Q + LE PKPVI+AV+G GGG + A + A++ A F E+ +G+ G
Sbjct: 89 GQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGG 148
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKS 182
QRLPR+ G + E+ T A A E GLV+ + E LL A L I S
Sbjct: 149 TQRLPRLAGRKR-ALELLLTGDAFSAERALEIGLVNAVV-PHEELLPAARALARRIIRHS 206
Query: 183 PVAVQGTKKTLVFSRDHAVEEGLNQ 207
PVAV AV GLN
Sbjct: 207 PVAVAAIL--------TAVTRGLNL 223
>gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase.
Length = 251
Score = 95.6 bits (238), Expect = 2e-23
Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 6 FDSLSENEECRVIIL-SAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 64
F+ + + RV++L S+ +F AG DL +E ++K + + +
Sbjct: 31 FEKIQADASARVVMLRSSVPGVFCAGADL------------KERRKMSPSEVQKFVNSLR 78
Query: 65 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQ 124
+ SSLE P I+ V GA +GGG+ L + D+R ++A F L E + + G Q
Sbjct: 79 STFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQ 138
Query: 125 RLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPV 184
RLPR++G +S E+ FT R+I A EA GLV+ E+ A+EL + I K P+
Sbjct: 139 RLPRLVG-RSRAKELIFTGRRIGAREAASMGLVNYCVPAGEAYEK-ALELAQEINQKGPL 196
Query: 185 AVQGTKKTLVFSRDHAVEEGLNQVDKES 212
A++ KK A+ EG +VD S
Sbjct: 197 AIKMAKK--------AINEGS-EVDMAS 215
>gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional.
Length = 277
Score = 93.9 bits (234), Expect = 1e-22
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLS--LGQEIAEQEDVARKSKILRK 58
E+ + F L ++ + ++L+ AG F +G D+ ++ ++ E R + L K
Sbjct: 48 ELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLAFTRMTGDLVK 107
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLT- 117
++ CP+P+I+AV G C G G L A+D+R T A +GL
Sbjct: 108 ----------AMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAG 157
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
AD+GA LPRIIG Q +E+ +T R + A E G ++L + E LLA A L
Sbjct: 158 ADMGACALLPRIIG-QGRASELLYTGRSMSAEEGERWGFFNRLVEP-EELLAEAQALARR 215
Query: 178 IASKSPVAVQGTKKTLVFSRDHAVEE 203
+A+ A TK L D +EE
Sbjct: 216 LAAGPTFAHGMTKTMLHQEWDMGLEE 241
>gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional.
Length = 296
Score = 93.9 bits (234), Expect = 2e-22
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSG-----MLSLGQEIAEQEDVARKSKI 55
E+ E FD+ ++ R +I++ AG+ F AG DLS L + E ++ R
Sbjct: 35 ELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPS 94
Query: 56 LRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 115
+ + + KPVI+AV+G +G G ++ A DIR A+ A F G
Sbjct: 95 DDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRG 154
Query: 116 LTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELG 175
+ + + LPR++G Q+ + E ++ R +A EA + GLV ++ + LL A L
Sbjct: 155 IVPEAASSWFLPRLVGLQTAL-EWVYSGRVFDAQEALDGGLVRSVH-PPDELLPAARALA 212
Query: 176 -ELIASKSPVAV 186
E+ + SPV+V
Sbjct: 213 REIADNTSPVSV 224
>gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase.
Length = 265
Score = 91.4 bits (227), Expect = 8e-22
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 6 FDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 65
F L E++ +VIIL+ +G+ F +G+DL+ E+V + + Q
Sbjct: 46 FKRLDEDDSVKVIILTGSGRAFCSGVDLTA----------AEEVFKGDVKDVETDPVAQ- 94
Query: 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQR 125
+ERC KP+I A++G I G + A DI A++ A F G+ G Q+
Sbjct: 95 ----MERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQK 150
Query: 126 LPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181
L RIIG E++ TA + A A GLV+ + ++ E LL A E+ E I
Sbjct: 151 LSRIIGANR-AREVSLTAMPLTAETAERWGLVNHVVEESE-LLKKAREVAEAIIKN 204
>gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional.
Length = 258
Score = 90.8 bits (226), Expect = 1e-21
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 2 IGECFDSLSE---NEECRVIILSAAGKIFTAGLDL----SGMLSLGQEIAEQEDVARKSK 54
F +L+E +++ V++L+ A F AGLDL + G + A
Sbjct: 33 RRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDGSAYGAQDALPNPSPA--- 89
Query: 55 ILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDI 114
KPVI A++GA + GG+ L A DI A++ A F +
Sbjct: 90 ---------------WPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARV 134
Query: 115 GLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIEL 174
G+ G RLP+ +G ++ T ++AA+A GLV+++ E LL A L
Sbjct: 135 GILPGWGLSVRLPQKVG-IGRARRMSLTGDFLDAADALRAGLVTEVVPHDE-LLPRARRL 192
Query: 175 GELIASKSPVAVQGTKK 191
IA +P AV+ K
Sbjct: 193 AASIAGNNPAAVRALKA 209
>gnl|CDD|236864 PRK11154, fadJ, multifunctional fatty acid oxidation complex
subunit alpha; Reviewed.
Length = 708
Score = 91.1 bits (227), Expect = 1e-20
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ L E++E + V+ +S F AG D++ ML+ + E E +AR+
Sbjct: 38 QVRAILKQLREDKELKGVVFISGKPDNFIAGADIN-MLAACKTAQEAEALARQG------ 90
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA--WFTLKEVDIGLT 117
Q+ + +E P PV++A+HGAC+GGG+ L A R T D L EV +GL
Sbjct: 91 ----QQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLL 146
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDD---KESLLAGAIEL 174
G QRLPR+IG + ++ I T +++ A +A + GLV DD LL A+EL
Sbjct: 147 PGSGGTQRLPRLIGVSTALDMI-LTGKQLRAKQALKLGLV----DDVVPHSILLEVAVEL 201
>gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated.
Length = 266
Score = 87.3 bits (217), Expect = 3e-20
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 22/190 (11%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ D+++ + RV++L+AAGK F AG DL M + AR R L
Sbjct: 42 ALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRA-----------ARGLAYFRALF 90
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL---T 117
+ + ++ P+PVI+ VHG G L+ + D+ A A F + V+IGL T
Sbjct: 91 ARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCST 150
Query: 118 ADVGALQR-LPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
V AL R +PR Q++ E+ T I+AA ARE GLV+++ ++L A L
Sbjct: 151 PMV-ALSRNVPR---KQAM--EMLLTGEFIDAATAREWGLVNRVV-PADALDAAVARLAA 203
Query: 177 LIASKSPVAV 186
+IA+KSP AV
Sbjct: 204 VIAAKSPAAV 213
>gnl|CDD|236908 PRK11423, PRK11423, methylmalonyl-CoA decarboxylase; Provisional.
Length = 261
Score = 87.0 bits (216), Expect = 3e-20
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 18/195 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAA--GKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRK 58
++ + L+ E RV+IL A K+++AG D+ + S G+ D LR+
Sbjct: 35 DLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGGR------DPLSYDDPLRQ 87
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
++ +++ PKPVI+ V G+ GG LI + D+ A + F + ++G+
Sbjct: 88 IL-------RMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPY 140
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
++ + G +V E+ FTA I A A G+++ + + +E L +++ I
Sbjct: 141 NLSGILNFTNDAGFH-IVKEMFFTASPITAQRALAVGILNHVVEVEE-LEDFTLQMAHHI 198
Query: 179 ASKSPVAVQGTKKTL 193
+ K+P+A+ K+ L
Sbjct: 199 SEKAPLAIAVIKEQL 213
>gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 85.8 bits (213), Expect = 8e-20
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTY 63
E ++ + R ++L+ AG F AG +L+ +L + + I
Sbjct: 37 EALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRAKPPSVQ---------AASIDGL 87
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGAL 123
I ++ PKPVI+AV GA G G SL A D+ A +DA F + V +GLT D G
Sbjct: 88 HDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGS 147
Query: 124 QRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSP 183
L R + Q L E+ + I A G+V++L + ++ LA A+ L + +A+ SP
Sbjct: 148 WFLARALPRQ-LATELLLEGKPISAERLHALGVVNRLAEPGQA-LAEALALADQLAAGSP 205
Query: 184 VAVQGTK 190
A+ K
Sbjct: 206 NALARIK 212
>gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional.
Length = 257
Score = 85.1 bits (211), Expect = 2e-19
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+G + +E I+++ + K F AG D+ M L + D I
Sbjct: 35 ELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSFMDVYKGD----------YI 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
T ++K + R KPVI+AV G +GGG L DI A A F E+ +G+ +
Sbjct: 85 TNWEK----VARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGM 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
G QRL R +G ++ ++ T R ++AAEA GLVS++ + LL A+ IAS
Sbjct: 141 GGSQRLTRAVG-KAKAMDLCLTGRMMDAAEAERAGLVSRVV-PADKLLDEALAAATTIAS 198
Query: 181 KSPVAVQGTKKTLVFSRDHAVEEGL 205
S AV K+ + + + + EGL
Sbjct: 199 FSLPAVMMAKEAVNRAYETTLAEGL 223
>gnl|CDD|236115 PRK07854, PRK07854, enoyl-CoA hydratase; Provisional.
Length = 243
Score = 83.1 bits (206), Expect = 6e-19
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 10 SENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISS 69
+ +E R I+L+ G +F AG DLSG LI + + +
Sbjct: 39 AVDESARAIVLTGQGTVFCAGADLSGD-------------VYADDFPDALI----EMLHA 81
Query: 70 LERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRI 129
++ P PVI+A++G IG G+ L A D+R +A+F G+ D ++RL +
Sbjct: 82 IDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSL 141
Query: 130 IGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGT 189
+G + A K+ A +A G+ +++ LA A IA +P+A+Q
Sbjct: 142 VGG-GRARAMLLGAEKLTAEQALATGMANRIGT-----LADAQAWAAEIAGLAPLALQHA 195
Query: 190 KKTLVFSRDHAVEE 203
K+ V + D A+EE
Sbjct: 196 KR--VLNDDGAIEE 207
>gnl|CDD|180423 PRK06143, PRK06143, enoyl-CoA hydratase; Provisional.
Length = 256
Score = 82.8 bits (205), Expect = 1e-18
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 6 FDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQ 64
L+ + + RV++L AG K F G D+ M +L Q AE I+ +
Sbjct: 43 LRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQASAE------------AFISRLR 90
Query: 65 KSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQ 124
++ P PVI+ + G C+GGG+ L A D+R A DA F + EV +G+ + + A
Sbjct: 91 DLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGIPSVIHA-A 149
Query: 125 RLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIE-LGELIASKSP 183
LPR+IG + + T I+AA+A GLV ++ E L A+E L +A P
Sbjct: 150 LLPRLIGW-ARTRWLLLTGETIDAAQALAWGLVDRVVPLAE--LDAAVERLAASLAGCGP 206
Query: 184 VAVQGTKKTLVFSRDHAVEEGLN 206
A++ K+ L D ++ ++
Sbjct: 207 QALRQQKRLLREWEDMPLDVAID 229
>gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 82.8 bits (205), Expect = 1e-18
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ L+ + RV++L+ AGK F AG DL M Q A++ ++ R+L
Sbjct: 36 ELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMR--AQMTADRATRIEEA---RRLA 90
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLT-AD 119
+ +L PKP+I + G GGG+ LI+ D+ A A F L E +GL A
Sbjct: 91 MMLK----ALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPAT 146
Query: 120 VGALQRLPRIIG--NQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGEL 177
+ P ++ ++ + +AR +A EA GL+S++ + L A+E E+
Sbjct: 147 IS-----PYVVARMGEANARRVFMSARLFDAEEAVRLGLLSRVVPAER--LDAAVE-AEV 198
Query: 178 IA--SKSPVAVQGTKK 191
S +P AV K
Sbjct: 199 TPYLSCAPGAVAAAKA 214
>gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional.
Length = 249
Score = 82.1 bits (203), Expect = 1e-18
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ + + + ++++ AGK F AG DL+ + + AE LR++
Sbjct: 34 QLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGRPAEDG--------LRRI- 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Y ++ CP P I+AV+GA +G G++L AAD+R A A F + +GL
Sbjct: 85 --YD-GFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGG 141
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA L R +G Q + F R +A A GL + DD +A A+EL A+
Sbjct: 142 GATWMLQRAVGPQVARAALLFGMR-FDAEAAVRHGLALMVADD---PVAAALELAAGPAA 197
Query: 181 KSPVAVQGTKKTL 193
V TK ++
Sbjct: 198 APRELVLATKASM 210
>gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional.
Length = 262
Score = 80.7 bits (200), Expect = 6e-18
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLS--------GMLSLGQEIAEQEDVARK 52
E+ E D + E++ R ++L+ AG+ F AG DL+ M LG+ I
Sbjct: 35 ELREALDQV-EDDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGESIE-------- 85
Query: 53 SKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEV 112
T Y + L P PVI+AV+G G G +L A DI A + A F V
Sbjct: 86 --------TFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFV 137
Query: 113 DIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
IGL D G LPR++G + +A K+ A +A + GL+ ++ DD +L A
Sbjct: 138 KIGLVPDSGGTWFLPRLVG-MARALGLALLGEKLSAEQAEQWGLIWRVVDD-AALADEAQ 195
Query: 173 ELGELIASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKE 211
+L +A++ + K+ + S + ++ Q+D E
Sbjct: 196 QLAAHLATQPTRGLALIKQAMNASATNTLDA---QLDLE 231
>gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA
hydratase paaB. This family of proteins are found
within apparent operons for the degradation of
phenylacetic acid. These proteins contain the enoyl-CoA
hydratase domain as detected by pfam00378. This activity
is consistent with current hypotheses for the
degradation pathway which involve the ligation of
phenylacetate with coenzyme A (paaF), hydroxylation
(paaGHIJK), ring-opening (paaN) and degradation of the
resulting fatty acid-like compound to a Krebs cycle
intermediate (paaABCDE).
Length = 256
Score = 80.3 bits (198), Expect = 8e-18
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLS-------GMLSLGQEIAEQEDVARKS 53
E+ E + + E ++ R ++L+ AG+ F AG DLS G LG+ I
Sbjct: 30 ELREALERV-ERDDARALMLTGAGRGFCAGQDLSERNPTPGGAPDLGRTIETF------- 81
Query: 54 KILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVD 113
Y + L P PV+ AV+G G G +L A DI A + A F
Sbjct: 82 ---------YNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAK 132
Query: 114 IGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIE 173
IGL D G LPR++G ++ +A K++A A GL+ ++ DD +L+ A
Sbjct: 133 IGLIPDSGGTWSLPRLVG-RARAMGLAMLGEKLDARTAASWGLIWQVVDD-AALMDEAQA 190
Query: 174 LGELIASKSPVAVQGTKKTLVFSRDHAVEEGLN 206
L +A++ + TK+ + + ++++ L+
Sbjct: 191 LAVHLAAQPTRGLALTKRAIQAAATNSLDTQLD 223
>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha
subunit, mitochondrial. Members represent alpha subunit
of mitochondrial multifunctional fatty acid degradation
enzyme complex. Subunit activities include: enoyl-CoA
hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA
dehydrogenase (EC 1.1.1.35). Some characterization in
human , pig , and rat. The beta subunit has activity:
acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Length = 737
Score = 82.2 bits (203), Expect = 1e-17
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 1 EIGECFDSLSENEECRVIIL-SAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E E + L NE + +L S F AG D+ M++ + E ++++
Sbjct: 45 EFKEVMNELWTNEAIKSAVLISGKPGSFVAGADI-QMIAACKTAQEVTQLSQEG------ 97
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLT 117
Q+ +E+ KP+++A+ G+C+GGG+ L A R ATKD L EV +GL
Sbjct: 98 ----QEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLL 153
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYD 162
G QRLP++ G + + ++ T +KI A A++ G+V +L D
Sbjct: 154 PGAGGTQRLPKLTGVPAAL-DMMLTGKKIRADRAKKMGIVDQLVD 197
>gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional.
Length = 288
Score = 78.5 bits (194), Expect = 5e-17
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ F ++ RVI+L+ AGK F+AG DL G +++ + L
Sbjct: 35 ELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGS----GTPGRDRDPGPDQHPTLWWDG 90
Query: 61 TTY--------QKSISSLERC------PKPVISAVHGACIGGGMSLITAADIRYATKDAW 106
T ++ L C PKP I+ V GACI GG+ L D+ A+ DA+
Sbjct: 91 ATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAF 150
Query: 107 FTLKEVDIGLTADVGALQRL-------PRIIGNQSLVNEIAFTARKIEAAEARECGLVSK 159
F+ V +G + ++ PR E+ FT ++ A EA G+V++
Sbjct: 151 FSDPVVRMG----IPGVEYFAHPWELGPRK------AKELLFTGDRLTADEAHRLGMVNR 200
Query: 160 LYDDKESLLAGAIELGELIASKSPVAVQGTKK 191
+ E L A +EL IA+ P ++ TK+
Sbjct: 201 VVPRDE-LEAETLELARRIAAMPPFGLRLTKR 231
>gnl|CDD|183293 PRK11730, fadB, multifunctional fatty acid oxidation complex
subunit alpha; Reviewed.
Length = 715
Score = 78.4 bits (194), Expect = 2e-16
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+GE D+L + + ++L++A F G D++ LSL E+ L + +
Sbjct: 38 SLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFAAPEEE---------LSQWL 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ LE P P ++A++G +GGG + A D R A+ DA L E +G+
Sbjct: 89 HFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGF 148
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV------SKLYDDKESLLAGAIEL 174
G RLPR+IG + + IA + + A +A + G V KL + +LL AI
Sbjct: 149 GGTVRLPRLIGADNALEWIA-AGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIA- 206
Query: 175 GEL 177
G+L
Sbjct: 207 GKL 209
>gnl|CDD|131493 TIGR02440, FadJ, fatty oxidation complex, alpha subunit FadJ.
Members represent alpha subunit of multifunctional
enzyme complex of the fatty acid degradation cycle.
Plays a minor role in aerobic beta-oxidation of fatty
acids. FadJI complex is necessary for anaerobic growth
on short-chain acids with nitrate as an electron
acceptor. Activities include: enoyl-CoA hydratase (EC
4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35),
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A
representative is E. coli FadJ (aka YfcX). This model
excludes the FadB of TIGR02437 equivalog model [Fatty
acid and phospholipid metabolism, Degradation].
Length = 699
Score = 77.2 bits (190), Expect = 6e-16
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 1 EIGECFDSLSENEECR-VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
++ E L ++ R ++++S F AG D+S ML+ Q E + +A++ ++L
Sbjct: 33 QVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADIS-MLAACQTAGEAKALAQQGQVL--- 88
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKD--AWFTLKEVDIGLT 117
+ LE P PV++A+HGAC+GGG+ L A R + D L EV +GL
Sbjct: 89 -------FAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLL 141
Query: 118 ADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLV 157
G QRLPR+IG + ++ I T +++ A +A + GLV
Sbjct: 142 PGSGGTQRLPRLIGVSTALDMI-LTGKQLRAKQALKLGLV 180
>gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional.
Length = 255
Score = 74.8 bits (184), Expect = 8e-16
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI E E+ R ++++A GK+F+ G DL M + +++DV KI +L+
Sbjct: 33 EILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEM----KRAVDEDDVQSLVKIA-ELV 87
Query: 61 TTYQKSIS-SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
IS ++++ PKPVI V GA G ++ AAD A+ F V +GL D
Sbjct: 88 NE----ISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPD 143
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160
G L L R IG +A T + A +A E G V ++
Sbjct: 144 AGGLFLLTRAIGLNRAT-HLAMTGEALTAEKALEYGFVYRV 183
>gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional.
Length = 268
Score = 74.7 bits (184), Expect = 1e-15
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 26/200 (13%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDV-ARKSKILRKL 59
E+ + + + + + RV+++ GK F+AG G L+L +E+A+ +V AR + R L
Sbjct: 43 ELADIWRDVDRDPDVRVVLIRGEGKAFSAG----GDLALVEEMADDFEVRARVWREARDL 98
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ ++ C KP++SA+HG +G G+ ADI A KDA +G+ A
Sbjct: 99 VY-------NVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAG 151
Query: 120 VGALQRLPRIIGNQSLVNEIA------FTARKIEAAEARECGLVSKLYDDKESLLAGAIE 173
A P + G +A + EA GLVS DD E LL A+E
Sbjct: 152 DHAAIVWPLLCG-------MAKAKYYLLLCEPVSGEEAERIGLVSLAVDDDE-LLPKALE 203
Query: 174 LGELIASKSPVAVQGTKKTL 193
+ E +A+ S A++ TK L
Sbjct: 204 VAERLAAGSQTAIRWTKYAL 223
>gnl|CDD|235632 PRK05869, PRK05869, enoyl-CoA hydratase; Validated.
Length = 222
Score = 72.2 bits (177), Expect = 4e-15
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
EI + L ++ +IL +IF+AG D+ + +L + A+ R
Sbjct: 38 EIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLSAQEADTAARVR--------- 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
Q+++ ++ PKP ++A+ G +G G++L AAD R + + F E+ GL
Sbjct: 89 ---QQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSG 145
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL 160
+ RL R G S E+ F+ R +A EA GL+ ++
Sbjct: 146 DGMARLTRAAG-PSRAKELVFSGRFFDAEEALALGLIDEM 184
>gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB.
Members represent alpha subunit of multifunctional
enzyme complex of the fatty acid degradation cycle.
Activities include: enoyl-CoA hydratase (EC 4.2.1.17),
dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8),
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35),
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A
representative is E. coli FadB. This model excludes the
FadJ family represented by SP:P77399 [Fatty acid and
phospholipid metabolism, Degradation].
Length = 714
Score = 74.5 bits (183), Expect = 5e-15
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 11/174 (6%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ + D++ + +IL++ F G D++ L L A L + +
Sbjct: 38 SLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGL---------FALPDAELIQWL 88
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
+ LE P P ++A++G +GGG + A D R A A L E +G+
Sbjct: 89 LFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGF 148
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIEL 174
G RLPR+IG + + E + ++ A +A + G V + + L A A++L
Sbjct: 149 GGTVRLPRVIGADNAL-EWIASGKENRAEDALKVGAVDAVV-TADKLGAAALQL 200
>gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 72.0 bits (177), Expect = 8e-15
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 16 RVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPK 75
R ++L+ G F AG DLS G + D A R++ + + PK
Sbjct: 52 RAVVLTHTGGTFCAGADLS---EAGGGGGDPYDAAVARA--REMTALLRAIVEL----PK 102
Query: 76 PVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSL 135
PVI+A+ G GG L+ A DI A ++ F L E IG+ + +L LPR+ +
Sbjct: 103 PVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRL--SPRA 160
Query: 136 VNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKK 191
T K AAEA GLV+ DD ++ +A L + SP + +K
Sbjct: 161 AARYYLTGEKFGAAEAARIGLVTAAADDVDAAVA---ALLADLRRGSPQGLAESKA 213
>gnl|CDD|235936 PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase;
Validated.
Length = 249
Score = 70.8 bits (174), Expect = 2e-14
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
++ E FD+++++ +V+IL+ F G G+LSL +
Sbjct: 36 QLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQTGKGTFTEA----------- 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
S CP PVI+A+ G IGGG+ L ADI ++++ +T + G T +
Sbjct: 85 ----NLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGM 140
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
GA LP +G +L E+ TAR AE ++ G+ + E +L A+EL +A
Sbjct: 141 GATAILPEKLG-LALGQEMLLTARYYRGAELKKRGVPFPVLPRAE-VLEKALELARSLAE 198
Query: 181 KSPVAVQGTKKTLV 194
K ++ K LV
Sbjct: 199 KPRHSLVLLKDHLV 212
>gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional.
Length = 260
Score = 69.7 bits (171), Expect = 6e-14
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
E+ + ++E+ +++L G+ F+AG D+ MLS E SK ++
Sbjct: 37 ELLQALKEVAESS-AHIVVLRGNGRGFSAGGDIKMMLSSNDE----------SKF-DGVM 84
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
T + + +L PK ISA+HG G G+S+ AD A A + + IGL D
Sbjct: 85 NTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDG 144
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDD 163
G L + +G +I + +K+ A EA + GL+ ++
Sbjct: 145 GGHFFLQKRVGENK-AKQIIWEGKKLSATEALDLGLIDEVIGG 186
>gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid
synthetase). This model represents an enzyme,
naphthoate synthase (dihydroxynaphthoic acid
synthetase), which is involved in the fifth step of the
menaquinone biosynthesis pathway. Together with
o-succinylbenzoate-CoA ligase (menE: TIGR01923), this
enzyme takes 2-succinylbenzoate and converts it into
1,4-di-hydroxy-2-naphthoate. Included above the trusted
cutoff are two enzymes from Arabadopsis thaliana and one
from Staphylococcus aureus which are identified as
putative enoyl-CoA hydratase/isomerases. These enzymes
group with the naphthoate synthases when building a tree
and when doing BLAST searches [Biosynthesis of
cofactors, prosthetic groups, and carriers, Menaquinone
and ubiquinone].
Length = 259
Score = 69.1 bits (169), Expect = 8e-14
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 16/195 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
EI + D E+ + V+IL+ AG K F +G D Q++ S + R
Sbjct: 34 EIIQALDDAREDPDIGVVILTGAGDKAFCSGGD--------QKVRGDYGYIDDSGVHRLN 85
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
+ Q+ I + CPKPVI+ V+G IGGG L D+ A ++A F +G + D
Sbjct: 86 VLDVQRQIRT---CPKPVIAMVNGYAIGGGHVLHMMCDLTIAAENARFGQTGPKVG-SFD 141
Query: 120 VG-ALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G + RI+G Q EI F R+ +A +A + GLV+ + L + I
Sbjct: 142 GGYGSSYMARIVG-QKKAREIWFLCRQYDAKQALDMGLVNTVV-PLADLEKETVRWCREI 199
Query: 179 ASKSPVAVQGTKKTL 193
KSP+A++ K L
Sbjct: 200 LQKSPMAIRMLKAAL 214
>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional.
Length = 248
Score = 67.9 bits (166), Expect = 2e-13
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 21/174 (12%)
Query: 7 DSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKS 66
++ + + RV+I++ G+ F G DLS + A L T+
Sbjct: 37 KQINADPKIRVVIVTGEGRAFCVGADLS---EFAPDFAID------------LRETFYPI 81
Query: 67 ISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRL 126
I + K ISA++G G + + + D ++A++D F +GL +D G L
Sbjct: 82 IREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFL 141
Query: 127 PRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
++ G + EI + A EA GL+ K+ +D L+ A E+ I++
Sbjct: 142 LKLTGQRFY--EILVLGGEFTAEEAERWGLL-KISEDP---LSDAEEMANRISN 189
>gnl|CDD|215151 PLN02267, PLN02267, enoyl-CoA hydratase/isomerase family protein.
Length = 239
Score = 67.8 bits (166), Expect = 2e-13
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 17 VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKP 76
V+I +A GK F+ G DL A+ A L ++ + ++ L P P
Sbjct: 47 VLITTAEGKFFSNGFDL--------AWAQAAGSAPSR--LHLMVAKLRPLVADLISLPMP 96
Query: 77 VISAVHGACIGGGMSLITAADIRYATKDAWFT-LKEVDIGLTADVGALQRLPRIIGNQSL 135
I+AV G G L + D KD + EVDIGL + L IG+ +
Sbjct: 97 TIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAA 156
Query: 136 VNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181
++ A K+ A EA E G+V +D E + A+ LGE +A++
Sbjct: 157 RRDVLLRAAKLTAEEAVEMGIVDSAHDSAEETVEAAVRLGEELAAR 202
>gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase;
Validated.
Length = 275
Score = 66.6 bits (163), Expect = 7e-13
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGML--SLGQEIAEQEDVARKSKILRK 58
E+ + D+L +++ V++L+ AG ++AG+DL + Q QE + R++ +
Sbjct: 39 EMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEILQERIRREAYGWWR 98
Query: 59 LITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA 118
+ YQK P I+ V+G C GGG S + A D+ A +A F L E++ G+
Sbjct: 99 RLRWYQK----------PTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPP 148
Query: 119 DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G + + +G++ + I T +A E GLV++ L A EL +
Sbjct: 149 GGGVSKAMADTVGHRDALYYI-MTGETFTGRKAAEMGLVNESV-PLAQLRARTRELAAKL 206
Query: 179 ASKSPVAVQGTKKTLVFSRD----------HAVEEGLNQVDKE 211
K+PV ++ K R+ +A E N +D E
Sbjct: 207 LEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLDPE 249
>gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated.
Length = 265
Score = 66.4 bits (162), Expect = 9e-13
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 7 DSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQE-----DVARKSKILRKLIT 61
D + + R ++L G+ F+AG DL+ M Q+ A+ + D AR+ L +L+
Sbjct: 43 DQVQSDASLRFLLLRGRGRHFSAGADLAWM----QQSADLDYNTNLDDARE---LAELMY 95
Query: 62 TYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVG 121
+L R P ++ V GA GG + LI+ D+ DA F L EV IGL V
Sbjct: 96 -------NLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVI 148
Query: 122 ALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASK 181
+ + + IG ++ A TA + + ARE GL+++ Y E L A +
Sbjct: 149 S-PFVVKAIGERA-ARRYALTAERFDGRRARELGLLAESYPAAE-LEAQVEAWIANLLLN 205
Query: 182 SPVAVQGTKKTL 193
SP A++ +K L
Sbjct: 206 SPQALRASKDLL 217
>gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein.
Length = 379
Score = 65.6 bits (160), Expect = 3e-12
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
+ E + +++ +II+ AG+ F+AG DL + +V + L I
Sbjct: 42 LLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRESDDSCLEVVYRMYWLCYHI 101
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADV 120
TY+K ++ VHG +GGG L+ R T+ F E +G D
Sbjct: 102 HTYKK----------TQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDC 151
Query: 121 GALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL 156
G L R+ G+ L +A T ++ E CGL
Sbjct: 152 GFSYILSRLPGH--LGEYLALTGARLNGKEMVACGL 185
>gnl|CDD|181386 PRK08321, PRK08321, naphthoate synthase; Validated.
Length = 302
Score = 63.5 bits (155), Expect = 9e-12
Identities = 52/160 (32%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 34 SGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLI 93
G + A+ D AR R I Q+ I + PK VI+ V G GGG SL
Sbjct: 101 DGYQYAEGDEADTVDPARAG---RLHILEVQRLIRFM---PKVVIAVVPGWAAGGGHSLH 154
Query: 94 TAADIRYATKD-AWFTLKEVDIGLTADVGALQR------LPRIIGNQSLVNEIAFTARKI 146
D+ A+++ A F K+ D ADVG+ L R +G Q EI F R
Sbjct: 155 VVCDLTLASREHARF--KQTD----ADVGSFDGGYGSAYLARQVG-QKFAREIFFLGRTY 207
Query: 147 EAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAV 186
A EA + G V+ + E L A+E I KSP A+
Sbjct: 208 SAEEAHDMGAVNAVVPHAE-LETEALEWAREINGKSPTAM 246
>gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional.
Length = 254
Score = 60.7 bits (148), Expect = 7e-11
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 6 FDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 65
F + ++ V +L AG F AG DL ++G + + +
Sbjct: 39 FRAFDADDAASVAVLWGAGGTFCAGADLK---AVGTGRGNRLHPSGDGPM---------- 85
Query: 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQR 125
S + R KPVI+AV G + GG+ L D+R A +DA F + G+ G R
Sbjct: 86 GPSRM-RLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVR 144
Query: 126 LPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIAS 180
LPR+IG S ++ T R ++A EA GL +++ ++ A A EL +A+
Sbjct: 145 LPRLIG-HSRAMDLILTGRPVDADEALAIGLANRVVPKGQARAA-AEELAAELAA 197
>gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase.
Length = 327
Score = 59.8 bits (145), Expect = 2e-10
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ F+ ++ VIIL+ G K F +G D + G +D R L L
Sbjct: 98 ELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGY--VGPDDAGR----LNVL 151
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTAD 119
Q + R PKPVI+ V G +GGG L D+ A +A F +G + D
Sbjct: 152 DLQIQ-----IRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVG-SFD 205
Query: 120 VG-ALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELI 178
G + R++G Q E+ F AR A+EA + GLV+ + + L ++ I
Sbjct: 206 AGYGSSIMARLVG-QKKAREMWFLARFYTASEALKMGLVNTVVPL-DELEGETVKWCREI 263
Query: 179 ASKSPVAVQGTKKTLVFSRDHAVEEG 204
SP A++ K L +A ++G
Sbjct: 264 LRNSPTAIRVLKSAL-----NAADDG 284
>gnl|CDD|132233 TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecarbonyl-CoA
hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA
hydratase, also called dienoyl-CoA hydratase, acts on
the product of benzoyl-CoA reductase (EC 1.3.99.15).
Benzoyl-CoA is a common intermediate in the degradation
of many aromatic compounds, and this enzyme is part of
an anaerobic pathway for dearomatization and
degradation.
Length = 251
Score = 58.0 bits (140), Expect = 5e-10
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 11 ENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQ--EDVARKSKILRKLITTYQKSIS 68
E+ R ++L A G F S G +AE + A L KL+ S
Sbjct: 41 EDSALRAVLLDAEGPHF----------SFGASVAEHMPDQCAAMLASLHKLVIAMLDS-- 88
Query: 69 SLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPR 128
P P++ AV G C+GGG+ + A ++ +A DA E+ +G+ A + R
Sbjct: 89 -----PVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPAASCLLPER 143
Query: 129 IIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKES 166
+ + ++ ++ R I+ AE GL + + +D E+
Sbjct: 144 M--GRVAAEDLLYSGRSIDGAEGARIGLANAVAEDPEN 179
>gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional.
Length = 302
Score = 57.7 bits (140), Expect = 1e-09
Identities = 52/192 (27%), Positives = 72/192 (37%), Gaps = 46/192 (23%)
Query: 16 RVIILSAAGKIFTAGLDLS----GMLSLG---------QEIAEQEDVARKSKILRKLITT 62
VI++S AGK F AG DLS G S G Q + D I ++++
Sbjct: 56 HVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSR 115
Query: 63 YQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTA---- 118
+ + SL KP ++ VHG C+ GG + D A DA IG
Sbjct: 116 FVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDA-------KIGYPPTRVW 168
Query: 119 ----------DVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLL 168
+G QR R++ FT I A+A E GL + +E L
Sbjct: 169 GVPATGMWAYRLGP-QRAKRLL----------FTGDCITGAQAAEWGLAVEAVPPEE-LD 216
Query: 169 AGAIELGELIAS 180
L E IA+
Sbjct: 217 ERTERLVERIAA 228
>gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional.
Length = 251
Score = 56.7 bits (137), Expect = 2e-09
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 11 ENEECRVIILSAAGKIFTAGLDLSGML-------SLGQEIAEQEDVARKSKILRKLITTY 63
++ R + F+AG D+ L S G EI + L L
Sbjct: 47 ADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGTSFGSEILD---------FLIALAEA- 96
Query: 64 QKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGAL 123
KP++S V G IG G ++ D+ +A+ + F VD+ L + G+
Sbjct: 97 ----------EKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSS 146
Query: 124 QRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSP 183
PR++G+Q +A A A+E GL+ K+ D+ E++ A ++ E +A+K P
Sbjct: 147 LLAPRLMGHQRAFALLAL-GEGFSAEAAQEAGLIWKIVDE-EAVEAETLKAAEELAAKPP 204
Query: 184 VAVQGTKKTLVFSRDHAVEEGLNQVDKESK 213
A+Q + + R E+ L ++D+E+K
Sbjct: 205 QALQIARDLMRGPR----EDILARIDEEAK 230
>gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein.
Length = 407
Score = 55.8 bits (134), Expect = 6e-09
Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 35/233 (15%)
Query: 6 FDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 65
++S EN + +++ +G+ F +G D+ +SL I E + + K
Sbjct: 78 YESWEENPDIGFVLMKGSGRAFCSGADV---VSLYHLINEG-----NVEECKLFFENLYK 129
Query: 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA--- 122
+ KP ++ + G +G G + R T F EV +G D GA
Sbjct: 130 FVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYY 189
Query: 123 LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGL----------------VSKLYDDKES 166
L RLP +G +A T +K+ E CGL + KL D +
Sbjct: 190 LSRLPGYLGEY-----LALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLTDDPA 244
Query: 167 LLAGAIE-LGELI-ASKSPVAVQGTKKTLVFSRDHAVEEGLNQVDKESKNGCD 217
++ ++ G+L+ KS V + F D VEE + ++ E+ + D
Sbjct: 245 VIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHD-TVEEIIEALENEAASSYD 296
>gnl|CDD|236373 PRK09076, PRK09076, enoyl-CoA hydratase; Provisional.
Length = 258
Score = 54.9 bits (133), Expect = 6e-09
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 77 VISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLV 136
I+A++G +GGG+ A DIR A + A L E +GL G Q LP ++G +
Sbjct: 98 SIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVG-EGWA 156
Query: 137 NEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLV 194
+ +++AA A GLV ++ + E+ A A+ L + +A++SP AV KTL+
Sbjct: 157 KRMILCGERVDAATALRIGLVEEVVEKGEAREA-ALALAQKVANQSPSAV-AACKTLI 212
>gnl|CDD|235938 PRK07112, PRK07112, polyketide biosynthesis enoyl-CoA hydratase;
Validated.
Length = 255
Score = 54.7 bits (132), Expect = 7e-09
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 15/169 (8%)
Query: 2 IGECFDSLSENEE-CRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLI 60
I EC D L E +++L ++F G D S + ++ ++ L L
Sbjct: 33 IAECMDVLDRCEHAATIVVLEGLPEVFCFGADFSAI---AEKPDAGRADLIDAEPLYDLW 89
Query: 61 TTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL-TAD 119
L P I+ V G GG+ + A+DI A + A F+L E+ GL A
Sbjct: 90 HR-------LATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPAC 142
Query: 120 VGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLL 168
V L L R IG Q + + + + A +A GLV + ++LL
Sbjct: 143 V--LPFLIRRIGTQK-AHYMTLMTQPVTAQQAFSWGLVDAYGANSDTLL 188
>gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional.
Length = 298
Score = 55.0 bits (132), Expect = 8e-09
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 1 EIGECFDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQE---DVARKSKILR 57
EI +++ +VI+L AG+ F+ G D G E + D + ++
Sbjct: 36 EIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVT 95
Query: 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDA 105
T + ++ R KPVI+ VHG C+GG ADI A+ DA
Sbjct: 96 ARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDA 143
>gnl|CDD|223524 COG0447, MenB, Dihydroxynaphthoic acid synthase [Coenzyme
metabolism].
Length = 282
Score = 54.3 bits (131), Expect = 1e-08
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 17/194 (8%)
Query: 1 EIGECFDSLSENEECRVIILSAAG---KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILR 57
E+ + F ++ VI+L+ G K F +G D G + + I R
Sbjct: 50 EMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYVDDDG-------IPR 102
Query: 58 KLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG-L 116
+ Q+ I + PKPVI+ V G IGGG L D+ A +A F +G
Sbjct: 103 LNVLDLQRLIRT---MPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSF 159
Query: 117 TADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGE 176
G+ L RI+G Q EI F R+ +A EA + GLV+ + L ++
Sbjct: 160 DGGYGS-SYLARIVG-QKKAREIWFLCRQYDAEEALDMGLVNTVV-PHADLEKETVQWAR 216
Query: 177 LIASKSPVAVQGTK 190
+ +KSP A++ K
Sbjct: 217 EMLAKSPTALRMLK 230
>gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase. Members
of this protein family are 2-ketocyclohexanecarboxyl-CoA
hydrolase, a ring-opening enzyme that acts in catabolism
of molecules such as benzoyl-CoA and cyclohexane
carboxylate. It converts -ketocyclohexanecarboxyl-CoA to
pimelyl-CoA. It is not sensitive to oxygen.
Length = 256
Score = 54.2 bits (130), Expect = 1e-08
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 68 SSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVG-ALQRL 126
S++ PKPVI+ V G IGGG L+T D+ A++ A F +G + D G L
Sbjct: 88 SAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVG-SVDPGYGTALL 146
Query: 127 PRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAV 186
R++G + EI + R+ A EA GLV+ + + L A + + I KSP A+
Sbjct: 147 ARVVGEKK-AREIWYLCRRYTAQEALAMGLVNAVV-PHDQLDAEVQKWCDEIVEKSPTAI 204
Query: 187 QGTKKTLVFSRDHAVEEGL 205
K++ F+ D A + G+
Sbjct: 205 AIAKRS--FNMDTAHQRGI 221
>gnl|CDD|180958 PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.
Length = 273
Score = 54.1 bits (131), Expect = 1e-08
Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 1 EIGECFDSLSENEECRVIILSAAG-KIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKL 59
E+ + F +++ VIIL+ AG K F +G D Q++ + R
Sbjct: 44 EMIDAFADARDDDNIGVIILTGAGDKAFCSGGD--------QKVRGYGGYVDDDGVPRLN 95
Query: 60 ITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWF--TLKEV---DI 114
+ Q+ I + CPKPVI+ V G IGGG L D+ A +A F T +V D
Sbjct: 96 VLDLQRLIRT---CPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDG 152
Query: 115 GLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKL--YDDKESLLAGAI 172
G A L RI+G Q EI F R+ +A EA + GLV+ + D E +
Sbjct: 153 GYGASY-----LARIVG-QKKAREIWFLCRQYDAQEALDMGLVNTVVPLADLE---KETV 203
Query: 173 ELGELIASKSPVAV 186
+ SP+A+
Sbjct: 204 RWCREMLQNSPMAL 217
>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase.
Length = 381
Score = 54.0 bits (129), Expect = 2e-08
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 32/166 (19%)
Query: 4 ECFDSLSENEECRVIILSAAGKIFTAGLDLS--------GMLSLGQEIAEQEDVARKSKI 55
+ F + E+ +++IL G+ F AG D++ G LG E +
Sbjct: 43 QLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDE------YM 96
Query: 56 LRKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIG 115
L ++ TY K+ +S ++G +GGG + R AT++ F + E +G
Sbjct: 97 LNYVMATYSKA----------QVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALG 146
Query: 116 LTADVGA---LQRLPRIIGNQSLVNEIAFTARKIEAAEARECGLVS 158
L DVGA L RLP G + T +++ AE CGL +
Sbjct: 147 LFPDVGASYFLSRLPGFFGEY-----VGLTGARLDGAEMLACGLAT 187
>gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional.
Length = 342
Score = 47.9 bits (115), Expect = 2e-06
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 74 PKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA---LQRLPRII 130
PKP I+ + G +GGG+ + R T+ + E IG DVG L R P +
Sbjct: 100 PKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGAL 159
Query: 131 GNQSLVNEIAFTARKIEAAEARECGL 156
G +A T +I AA+A GL
Sbjct: 160 GTY-----LALTGARISAADALYAGL 180
>gnl|CDD|235744 PRK06213, PRK06213, enoyl-CoA hydratase; Provisional.
Length = 229
Score = 44.6 bits (106), Expect = 2e-05
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 26/180 (14%)
Query: 17 VIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKP 76
V++++ IF+ G DL M S G + A L+T L PKP
Sbjct: 47 VVVITGQPGIFSGGFDLKVMTS-GAQAA------------IALLTAGSTLARRLLSHPKP 93
Query: 77 VISAVHGACIGGGMSLITAADIRYATKDAWFT--LKEVDIGLTADVGAL----QRLPRII 130
VI A G I G L+ +AD R F L EV IG+T A+ RL
Sbjct: 94 VIVACTGHAIAKGAFLLLSADYRIGV-HGPFKIGLNEVAIGMTMPHAAIELARDRLTPSA 152
Query: 131 GNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKESLLAGAIELGELIASKSPVAVQGTK 190
++++N A + EA G + ++ E LLA A +A + A TK
Sbjct: 153 FQRAVIN-----AEMFDPEEAVAAGFLDEVV-PPEQLLARAQAAARELAGLNMGAHAATK 206
>gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein.
Length = 401
Score = 44.3 bits (104), Expect = 3e-05
Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 10/160 (6%)
Query: 6 FDSLSENEECRVIILSAAGKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQK 65
+ + E+ +++ +G+ F AG D+ + L + + +R+ ++
Sbjct: 73 YKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDA--------IREFFSSLYS 124
Query: 66 SISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQR 125
I L KP ++ ++G +GGG + R AT F E IG D GA
Sbjct: 125 FIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFN 184
Query: 126 LPRIIGNQSLVNEIAFTARKIEAAEARECGLVSKLYDDKE 165
L + G L + T K+ AE CGL + +E
Sbjct: 185 LSHLPGR--LGEYLGLTGLKLSGAEMLACGLATHYIRSEE 222
>gnl|CDD|215635 PLN03214, PLN03214, probable enoyl-CoA hydratase/isomerase;
Provisional.
Length = 278
Score = 42.9 bits (101), Expect = 7e-05
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 17/178 (9%)
Query: 24 GKIFTAGLDLSGMLSLGQEIAEQEDVARKSKILRKLITTYQKSISSLERCPKPVISAVHG 83
G +F +GL + + G +IAE + + T + L R + A+ G
Sbjct: 58 GVVFASGLRRD-VFTAGNDIAELYAPKTSAARYAEFWLTQTTFLVRLLRSRLATVCAIRG 116
Query: 84 ACIGGGMSLITAADIRYATKDAWFTLKEVDIGL-TADVGALQRLPRIIGNQSLVNEIAFT 142
AC GG ++ D R T + L EV +G+ A + R+I + + +
Sbjct: 117 ACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVID-RKVAESLLLR 175
Query: 143 ARKIEAAEARECGLV------SKLYDDKESLLAGAIELGELIASKSPVAVQGTKKTLV 194
R + AEA++ GL+ + L + S + A+ K P A + K L+
Sbjct: 176 GRLVRPAEAKQLGLIDEVVPAAALMEAAASAMERAL--------KLPSAARAATKALL 225
>gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA
hydrolase. Members of this protein family are
6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a
ring-hydrolyzing enzyme in the anaerobic metabolism of
aromatic enzymes by way of benzoyl-CoA, as seen in
Thauera aromatica, Geobacter metallireducens, and
Azoarcus sp. Note that Rhodopseudomonas palustris uses a
different pathway to perform a similar degradation of
benzoyl-CoA to 3-hydroxpimelyl-CoA.
Length = 360
Score = 40.7 bits (95), Expect = 5e-04
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 57 RKLITTYQKSISSLERCPKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGL 116
R+ + + +S++ C KPVI V+G IGGG + AAD A A F G
Sbjct: 107 RQYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGS 166
Query: 117 TADVGALQRLPRIIG-NQSLVNEIA---FTARK 145
GA LP +IG Q++V+ ++A K
Sbjct: 167 APIGGATDFLPLMIGCEQAMVSGTLCEPWSAHK 199
>gnl|CDD|234581 PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.
Length = 244
Score = 30.1 bits (69), Expect = 1.0
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 2 IGECFDSL--SENEECRVIILSAAGKIFT 28
+ + D+ + E+ +VI+LS GK FT
Sbjct: 67 LFDAIDAAKAAAGEKAKVILLSPQGKPFT 95
>gnl|CDD|223413 COG0336, TrmD, tRNA-(guanine-N1)-methyltransferase [Translation,
ribosomal structure and biogenesis].
Length = 240
Score = 29.9 bits (68), Expect = 1.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 2 IGECFDSLSENEECRVIILSAAGKIFT 28
+ + DS+ ++ +VI+LS GK FT
Sbjct: 67 LFDALDSVKAAKKAKVILLSPQGKPFT 93
>gnl|CDD|213787 TIGR03222, benzo_boxC, benzoyl-CoA-dihydrodiol lyase. In the
presence of O2, the benzoyl-CoA oxygenase/reductase
BoxBA BoxAB converts benzoyl-CoA to
2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this
family, BoxC, homologous to enoyl-CoA
hydratases/isomerases, hydrolyze this compound to
3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Length = 546
Score = 30.5 bits (69), Expect = 1.1
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 82 HGACIGGGMS-LITAADIRY-------ATKDAWFTLKEVDIGLTADVGALQRLP-RIIGN 132
G+C G ++ L AAD Y + TL E++ GL V L RL R
Sbjct: 374 PGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSRLATRFYAE 433
Query: 133 QSLVNEI-AFTARKIEAAEARECGLVSKLYDDKESLLAGAIELG-ELIASKSPVAVQGTK 190
+ V + + ++A EA GLV+ DD + I + E AS SP A+ G +
Sbjct: 434 PAPVAAVRDKIGQALDAEEAERLGLVTAAPDDID--WEDEIRIALEERASFSPDALTGLE 491
Query: 191 KTLVF 195
L F
Sbjct: 492 ANLRF 496
>gnl|CDD|236338 PRK08788, PRK08788, enoyl-CoA hydratase; Validated.
Length = 287
Score = 29.9 bits (68), Expect = 1.4
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 78 ISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVN 137
I+ V G +GGG + A + A E+ L +GA L R +G + L
Sbjct: 125 IALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPK-LAE 183
Query: 138 EIAFTARKIEAAEARECGLVSKLYDDKESLLA 169
E+ + + A E + GLV L +D + A
Sbjct: 184 ELILSGKLYTAEELHDMGLVDVLVEDGQGEAA 215
>gnl|CDD|223830 COG0759, COG0759, Uncharacterized conserved protein [Function
unknown].
Length = 92
Score = 28.1 bits (63), Expect = 1.5
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 10/53 (18%)
Query: 51 RKSKILRKLITTYQKSISSLER--------CPKPVISAV--HGACIGGGMSLI 93
K+L LI YQ+ IS L C + I A+ HG G ++L
Sbjct: 5 LMKKLLIFLIRFYQRFISPLLPPSCRFYPTCSEYAIEALKKHGLLKGLWLTLK 57
>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid
synthase PfaA. Members of the seed for this alignment
are involved in omega-3 polyunsaturated fatty acid
biosynthesis, such as the protein PfaA from the
eicosapentaenoic acid biosynthesis operon in
Photobacterium profundum strain SS9. PfaA is encoded
together with PfaB, PfaC, and PfaD, and the functions of
the individual polypeptides have not yet been described.
More distant homologs of PfaA, also included with the
reach of this model, appear to be involved in
polyketide-like biosynthetic mechanisms of
polyunsaturated fatty acid biosynthesis, an alternative
to the more familiar iterated mechanism of chain
extension and desaturation, and in most cases are
encoded near genes for homologs of PfaB, PfaC, and/or
PfaD.
Length = 2582
Score = 28.8 bits (64), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 141 FTARKIEAAEARECGLVSKLYDDKESLLAGAI 172
T R I A AR G V+K D+ ++L AI
Sbjct: 520 NTLRTIAVALAR-LGFVAKNADELITMLEQAI 550
>gnl|CDD|238507 cd01036, ClC_euk, Chloride channel, ClC. These domains are found
in the eukaryotic halogen ion (Cl-, Br- and I-) channel
proteins that perform a variety of functions including
cell volume regulation, membrane potential
stabilization, charge compensation necessary for the
acidification of intracellular organelles, signal
transduction and transepithelial transport. They are
also involved in many pathophysiological processes and
are responsible for a number of human diseases. These
proteins belong to the ClC superfamily of chloride ion
channels, which share the unique double-barreled
architecture and voltage-dependent gating mechanism.
The gating is conferred by the permeating anion itself,
acting as the gating charge. Some proteins possess long
C-terminal cytoplasmic regions containing two CBS
(cystathionine beta synthase) domains of putative
regulatory function.
Length = 416
Score = 28.5 bits (64), Expect = 4.4
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 74 PKPVISAVHGACIGGGMSLITAADIRYATKDAWFTLKEVDIGLTADVGA 122
P VI A G +G + I A I + W D G+ A +GA
Sbjct: 322 PSLVIGAAIGRLVGLLVHRIAVAGIGAESATLW-----ADPGVYALIGA 365
>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase. Members of this
subfamily are probable C-S lyases from a family of
pyridoxal phosphate-dependent enzymes that tend to be
(mis)annotated as probable aminotransferases. One member
is PatB of Bacillus subtilis, a proven C-S-lyase.
Another is the virulence factor cystalysin from
Treponema denticola, whose hemolysin activity may stem
from H2S production. Members of the seed alignment occur
next to examples of the enzyme 5-histidylcysteine
sulfoxide synthase, from ovothiol A biosynthesis, and
would be expected to perform a C-S cleavage of
5-histidylcysteine sulfoxide to leave
1-methyl-4-mercaptohistidine (ovothiol A).
Length = 384
Score = 28.0 bits (63), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 6 FDSLSENEECRVIILSAAGKIFT-AGLDLS 34
SLS R + L + GK F AGL++S
Sbjct: 212 LASLSPEIAERTVTLLSPGKTFNIAGLNIS 241
>gnl|CDD|153086 cd01677, PFL2_DhaB_BssA, Pyruvate formate lyase 2 and related
enzymes. This family includes pyruvate formate lyase 2
(PFL2), B12-independent glycerol dehydratase (DhaB) and
the alpha subunit of benzylsuccinate synthase (BssA),
all of which have a highly conserved ten-stranded
alpha/beta barrel domain, which is similar to those of
PFL1 (pyruvate formate lyase 1) and RNR (ribonucleotide
reductase). Pyruvate formate lyase catalyzes a key step
in anaerobic glycolysis, the conversion of pyruvate and
CoenzymeA to formate and acetylCoA. DhaB catalyzes the
first step in the conversion of glycerol to
1,3-propanediol while BssA catalyzes the first step in
the anaerobic mineralization of both toluene and
m-xylene.
Length = 781
Score = 27.6 bits (62), Expect = 7.9
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 71 ERCPKPVISAVHGACIGGGMSLITAADIRYAT 102
E P P +SA+ CI G I A RY
Sbjct: 511 EVAPAPFLSALVDDCIEKGKD-INAGGARYNF 541
>gnl|CDD|220333 pfam09663, Amido_AtzD_TrzD, Amidohydrolase ring-opening protein
(Amido_AtzD_TrzD). Members of this family are
ring-opening amidohydrolases, including cyanuric acid
amidohydrolase (EC:3.5.2.15) (AtzD and TrzD) and
barbiturase. Note that barbiturase does not act as
defined for EC:3.5.2.1 (barbiturate + water = malonate +
urea) but rather catalyzes the ring opening of
barbiturase acid to ureidomalonic acid.
Length = 365
Score = 27.4 bits (61), Expect = 8.0
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 24/94 (25%)
Query: 94 TAADIRYATKDAWFTLKEVDIGLTADVGALQRLPRIIGNQSLVNEIAFTARKIEAAEARE 153
AA ++ A DA I ADV +Q V T+ +I AEAR
Sbjct: 134 VAAAVKAAMADA-------GIADPADVHFVQ-----------VKCPLLTSERIADAEARG 175
Query: 154 CGLV------SKLYDDKESLLAGAIELGELIASK 181
+ S Y S L A+ LGE+ A+
Sbjct: 176 KTVATHDTLKSMGYSRGASALGIAVALGEVPAAD 209
>gnl|CDD|227168 COG4831, COG4831, Roadblock/LC7 domain [Function unknown].
Length = 109
Score = 26.3 bits (58), Expect = 8.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 237 CLIGSIGVFHTLDRVDLNQ 255
C++G++GVF LD+ D N+
Sbjct: 83 CIMGNVGVFVELDKADFNK 101
>gnl|CDD|224082 COG1160, COG1160, Predicted GTPases [General function prediction
only].
Length = 444
Score = 27.5 bits (62), Expect = 9.3
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 26 IFTAGLDLSGMLSLGQEIAEQ-EDVARKSKIL------RKLITTYQKSISS-LERCPKPV 77
I T GLD L + I EQ ++ ++ R+ IT + I+ L R KPV
Sbjct: 56 IDTGGLDDGDEDELQELIREQALIAIEEADVILFVVDGREGITPADEEIAKILRRSKKPV 115
Query: 78 ISAV 81
I V
Sbjct: 116 ILVV 119
>gnl|CDD|212483 cd01736, LSm14_N, Like-Sm protein 14, N-terminal domain. LSm14
(also known as RAP55) belongs to a family of Sm-like
proteins that associate with RNA to form the core domain
of the ribonucleoprotein particles involved in a variety
of RNA processing events including pre-mRNA splicing,
telomere replication, and mRNA degradation. Members of
this family share a highly conserved Sm fold, containing
an N-terminal helix followed by a strongly bent
five-stranded antiparallel beta-sheet, that associates
with other Sm proteins to form hexameric and heptameric
ring structures. In addition to the N-terminal Sm-like
domain, LSm14 has an uncharacterized C-terminal domain
containing a conserved DFDF box. In Xenopus laevis,
LSm14 is an oocyte-specific constituent of
ribonucleoprotein particles.
Length = 74
Score = 25.6 bits (57), Expect = 9.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 7/34 (20%)
Query: 86 IGGGMSLITAADIRYA-------TKDAWFTLKEV 112
IG +SLI+ +DIRY T+D+ LK V
Sbjct: 5 IGSKISLISKSDIRYEGILYTIDTEDSTIALKNV 38
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.135 0.388
Gapped
Lambda K H
0.267 0.0656 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 13,667,381
Number of extensions: 1292000
Number of successful extensions: 1328
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1180
Number of HSP's successfully gapped: 113
Length of query: 275
Length of database: 10,937,602
Length adjustment: 96
Effective length of query: 179
Effective length of database: 6,679,618
Effective search space: 1195651622
Effective search space used: 1195651622
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.3 bits)