Query psy14407
Match_columns 522
No_of_seqs 134 out of 1182
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 19:04:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 3.6E-90 1.2E-94 736.5 40.7 476 7-517 56-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 2.8E-85 9.7E-90 699.6 36.3 482 4-519 70-580 (583)
3 3q9t_A Choline dehydrogenase a 100.0 1.7E-83 5.8E-88 686.6 39.4 476 4-519 57-574 (577)
4 1gpe_A Protein (glucose oxidas 100.0 8.8E-83 3E-87 686.2 29.2 481 5-519 76-584 (587)
5 2jbv_A Choline oxidase; alcoho 100.0 6.1E-79 2.1E-83 651.9 44.5 459 7-520 66-532 (546)
6 3t37_A Probable dehydrogenase; 100.0 5.3E-77 1.8E-81 637.6 42.3 454 3-516 65-522 (526)
7 1ju2_A HydroxynitrIle lyase; f 100.0 6.1E-65 2.1E-69 542.5 34.8 423 11-517 80-516 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 5.3E-63 1.8E-67 530.7 27.8 433 30-521 84-546 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 9.4E-62 3.2E-66 515.1 24.5 405 8-519 58-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 1.5E-60 5.2E-65 505.9 23.0 404 7-517 63-504 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 4.5E-44 1.5E-48 387.0 24.4 412 34-519 156-614 (623)
12 4at0_A 3-ketosteroid-delta4-5a 97.8 0.00042 1.4E-08 72.8 16.1 59 169-228 213-272 (510)
13 1qo8_A Flavocytochrome C3 fuma 95.6 0.015 5.2E-07 61.7 6.9 57 169-227 261-318 (566)
14 1y0p_A Fumarate reductase flav 95.5 0.021 7.1E-07 60.7 7.3 61 162-224 260-320 (571)
15 1d4d_A Flavocytochrome C fumar 95.4 0.021 7.2E-07 60.7 7.1 58 169-228 266-325 (572)
16 3da1_A Glycerol-3-phosphate de 94.8 0.067 2.3E-06 56.6 8.8 61 169-232 181-242 (561)
17 2h88_A Succinate dehydrogenase 94.8 0.049 1.7E-06 58.3 7.8 52 169-222 166-218 (621)
18 2wdq_A Succinate dehydrogenase 94.4 0.044 1.5E-06 58.3 6.3 53 169-222 154-207 (588)
19 2rgh_A Alpha-glycerophosphate 94.4 0.074 2.5E-06 56.4 8.0 59 169-230 199-258 (571)
20 1kf6_A Fumarate reductase flav 94.3 0.079 2.7E-06 56.5 7.8 53 169-223 146-199 (602)
21 2bs2_A Quinol-fumarate reducta 93.8 0.1 3.6E-06 56.1 7.8 52 169-222 169-221 (660)
22 1chu_A Protein (L-aspartate ox 93.8 0.12 4.1E-06 54.3 8.0 52 170-222 151-209 (540)
23 3dme_A Conserved exported prot 92.8 0.077 2.6E-06 52.2 4.3 58 169-231 161-219 (369)
24 4dgk_A Phytoene dehydrogenase; 92.8 0.051 1.7E-06 56.4 3.1 54 169-228 232-285 (501)
25 3gyx_A Adenylylsulfate reducta 92.3 0.11 3.8E-06 56.0 5.0 50 172-222 182-234 (662)
26 1jnr_A Adenylylsulfate reducta 92.0 0.21 7E-06 53.8 6.7 50 172-222 166-219 (643)
27 3e1t_A Halogenase; flavoprotei 91.6 0.21 7.1E-06 52.1 6.2 57 161-220 115-171 (512)
28 3dje_A Fructosyl amine: oxygen 91.1 0.11 3.6E-06 52.9 3.2 51 169-226 172-225 (438)
29 1rp0_A ARA6, thiazole biosynth 91.0 0.67 2.3E-05 44.0 8.6 49 169-219 131-189 (284)
30 1y56_B Sarcosine oxidase; dehy 90.6 0.23 7.9E-06 49.2 5.1 54 169-230 160-213 (382)
31 3ka7_A Oxidoreductase; structu 90.2 0.44 1.5E-05 48.0 6.8 52 169-227 207-258 (425)
32 3atr_A Conserved archaeal prot 90.1 0.39 1.3E-05 49.1 6.4 51 169-221 111-162 (453)
33 2i0z_A NAD(FAD)-utilizing dehy 89.7 0.25 8.5E-06 50.5 4.5 50 169-224 145-194 (447)
34 2qcu_A Aerobic glycerol-3-phos 89.5 0.71 2.4E-05 47.9 7.9 55 169-227 160-215 (501)
35 2gag_B Heterotetrameric sarcos 89.1 0.33 1.1E-05 48.4 4.8 55 169-231 185-239 (405)
36 3cgv_A Geranylgeranyl reductas 88.7 0.41 1.4E-05 47.6 5.2 56 161-220 106-161 (397)
37 3f8d_A Thioredoxin reductase ( 88.6 1.3 4.4E-05 42.2 8.6 66 162-231 195-261 (323)
38 3axb_A Putative oxidoreductase 87.7 0.35 1.2E-05 49.2 4.1 54 169-230 192-262 (448)
39 3nyc_A D-arginine dehydrogenas 87.2 0.47 1.6E-05 46.7 4.6 54 169-231 165-218 (381)
40 3cty_A Thioredoxin reductase; 87.0 0.65 2.2E-05 44.6 5.4 61 169-231 201-262 (319)
41 3r9u_A Thioredoxin reductase; 85.6 0.74 2.5E-05 43.8 4.9 56 169-226 194-249 (315)
42 1fl2_A Alkyl hydroperoxide red 85.2 1.4 4.8E-05 41.9 6.7 55 170-226 192-247 (310)
43 3itj_A Thioredoxin reductase 1 85.1 1.5 5.1E-05 42.2 6.8 56 169-226 220-276 (338)
44 3lxd_A FAD-dependent pyridine 84.9 0.74 2.5E-05 46.3 4.6 64 162-232 199-262 (415)
45 3fg2_P Putative rubredoxin red 84.8 0.71 2.4E-05 46.3 4.4 58 169-232 195-252 (404)
46 3ab1_A Ferredoxin--NADP reduct 84.4 1.6 5.6E-05 42.6 6.9 60 169-230 213-272 (360)
47 1mo9_A ORF3; nucleotide bindin 83.5 1.5 5E-05 45.7 6.3 62 169-232 266-328 (523)
48 3i3l_A Alkylhalidase CMLS; fla 83.0 1.1 3.7E-05 47.5 5.1 55 161-219 132-186 (591)
49 1pj5_A N,N-dimethylglycine oxi 82.4 0.99 3.4E-05 50.0 4.7 55 169-231 162-216 (830)
50 1trb_A Thioredoxin reductase; 82.0 1.9 6.5E-05 41.1 6.1 56 169-226 195-252 (320)
51 3nix_A Flavoprotein/dehydrogen 81.8 2.7 9.2E-05 41.9 7.4 49 169-220 117-165 (421)
52 2gmh_A Electron transfer flavo 81.4 1.2 4.2E-05 47.0 4.8 61 161-223 148-219 (584)
53 3nrn_A Uncharacterized protein 80.5 1.4 4.9E-05 44.1 4.8 49 169-226 200-248 (421)
54 3nlc_A Uncharacterized protein 80.3 1.2 4E-05 46.7 4.1 47 169-221 231-277 (549)
55 2oln_A NIKD protein; flavoprot 80.1 2.9 9.8E-05 41.4 6.9 50 169-227 164-213 (397)
56 3jsk_A Cypbp37 protein; octame 79.9 3 0.0001 40.8 6.6 56 165-222 169-252 (344)
57 1ryi_A Glycine oxidase; flavop 79.4 1.1 3.6E-05 44.3 3.3 52 169-229 175-226 (382)
58 2cul_A Glucose-inhibited divis 78.9 2.3 7.8E-05 38.8 5.2 57 161-224 72-128 (232)
59 1vdc_A NTR, NADPH dependent th 78.5 3.7 0.00013 39.3 6.9 56 169-226 206-264 (333)
60 1hyu_A AHPF, alkyl hydroperoxi 78.0 3.2 0.00011 43.1 6.6 55 170-226 403-458 (521)
61 2q0l_A TRXR, thioredoxin reduc 76.5 4.6 0.00016 38.2 6.9 58 169-228 190-248 (311)
62 2q7v_A Thioredoxin reductase; 76.3 4.6 0.00016 38.6 6.8 55 169-226 199-254 (325)
63 3oz2_A Digeranylgeranylglycero 76.3 2.7 9.4E-05 41.1 5.3 58 161-223 106-163 (397)
64 3p1w_A Rabgdi protein; GDI RAB 75.6 1.3 4.6E-05 45.3 2.8 47 169-220 267-313 (475)
65 3c4n_A Uncharacterized protein 75.6 1.2 4.1E-05 44.6 2.5 54 169-231 183-246 (405)
66 3ps9_A TRNA 5-methylaminomethy 75.0 2.3 8E-05 45.7 4.7 51 169-227 428-478 (676)
67 3lzw_A Ferredoxin--NADP reduct 74.2 3.1 0.00011 39.7 5.0 60 169-231 200-260 (332)
68 2gjc_A Thiazole biosynthetic e 73.9 6.4 0.00022 38.1 7.0 51 169-219 158-237 (326)
69 3iwa_A FAD-dependent pyridine 73.7 3.4 0.00012 42.2 5.4 57 169-232 213-269 (472)
70 2e5v_A L-aspartate oxidase; ar 73.2 2 6.7E-05 44.1 3.4 48 169-222 130-177 (472)
71 2gf3_A MSOX, monomeric sarcosi 72.1 3.4 0.00012 40.6 4.8 49 169-226 161-209 (389)
72 3s5w_A L-ornithine 5-monooxyge 70.5 5.9 0.0002 40.1 6.3 61 160-224 130-193 (463)
73 3ces_A MNMG, tRNA uridine 5-ca 70.3 3.4 0.00012 44.0 4.5 46 170-222 137-182 (651)
74 2zxi_A TRNA uridine 5-carboxym 69.5 3.7 0.00013 43.6 4.5 47 170-223 136-182 (637)
75 3pvc_A TRNA 5-methylaminomethy 68.8 2.1 7.2E-05 46.2 2.6 52 169-227 423-474 (689)
76 3v76_A Flavoprotein; structura 68.4 5.1 0.00017 40.3 5.1 54 162-224 137-190 (417)
77 2zbw_A Thioredoxin reductase; 67.8 7.9 0.00027 37.0 6.3 59 169-230 202-261 (335)
78 2uzz_A N-methyl-L-tryptophan o 67.4 4.7 0.00016 39.3 4.6 49 169-226 160-208 (372)
79 3s5w_A L-ornithine 5-monooxyge 66.8 13 0.00043 37.6 7.9 49 171-222 329-378 (463)
80 3ef6_A Toluene 1,2-dioxygenase 64.8 2.6 9E-05 42.2 2.2 57 169-232 196-252 (410)
81 1k0i_A P-hydroxybenzoate hydro 64.2 9.3 0.00032 37.6 6.1 50 170-222 115-164 (394)
82 2xve_A Flavin-containing monoo 64.1 3.9 0.00013 41.7 3.3 65 160-226 104-171 (464)
83 2bry_A NEDD9 interacting prote 63.7 1.3 4.3E-05 45.9 -0.5 55 169-224 177-233 (497)
84 2gqf_A Hypothetical protein HI 63.5 2.8 9.4E-05 42.0 2.0 56 161-224 113-171 (401)
85 1q1r_A Putidaredoxin reductase 62.2 8.6 0.0003 38.6 5.5 58 169-232 202-261 (431)
86 1m6i_A Programmed cell death p 60.1 6 0.0002 40.7 3.9 57 169-232 237-293 (493)
87 2ywl_A Thioredoxin reductase r 60.0 6.9 0.00023 33.6 3.8 59 161-231 60-118 (180)
88 2qa1_A PGAE, polyketide oxygen 60.0 11 0.00036 38.9 5.8 57 161-222 110-166 (500)
89 4b63_A L-ornithine N5 monooxyg 59.5 10 0.00035 39.0 5.5 59 159-219 147-212 (501)
90 3ihg_A RDME; flavoenzyme, anth 59.3 10 0.00035 39.3 5.5 50 170-221 132-183 (535)
91 3cp8_A TRNA uridine 5-carboxym 58.9 9.6 0.00033 40.5 5.2 47 169-222 129-175 (641)
92 2qae_A Lipoamide, dihydrolipoy 58.8 15 0.00052 37.1 6.7 59 170-231 228-288 (468)
93 2x3n_A Probable FAD-dependent 58.4 9.3 0.00032 37.7 4.9 47 170-222 120-167 (399)
94 3hyw_A Sulfide-quinone reducta 58.0 10 0.00034 38.1 5.1 62 161-231 204-265 (430)
95 4a9w_A Monooxygenase; baeyer-v 57.6 5 0.00017 38.6 2.7 59 160-226 79-137 (357)
96 2eq6_A Pyruvate dehydrogenase 57.5 10 0.00035 38.5 5.1 59 169-231 221-283 (464)
97 2qa2_A CABE, polyketide oxygen 57.4 13 0.00043 38.3 5.8 49 169-221 118-166 (499)
98 2weu_A Tryptophan 5-halogenase 57.0 7.8 0.00027 39.8 4.2 52 161-219 177-228 (511)
99 3urh_A Dihydrolipoyl dehydroge 56.6 11 0.00038 38.5 5.2 60 169-231 250-312 (491)
100 2v3a_A Rubredoxin reductase; a 55.4 14 0.00049 36.2 5.7 63 162-232 192-254 (384)
101 1d5t_A Guanine nucleotide diss 55.3 8.1 0.00028 38.9 3.9 45 169-220 245-289 (433)
102 1zmd_A Dihydrolipoyl dehydroge 55.0 11 0.00037 38.3 4.8 61 169-231 231-294 (474)
103 2e4g_A Tryptophan halogenase; 54.6 12 0.00042 38.9 5.3 43 171-219 208-250 (550)
104 3ic9_A Dihydrolipoamide dehydr 53.9 11 0.00037 38.7 4.6 50 173-225 229-278 (492)
105 1v59_A Dihydrolipoamide dehydr 53.7 9.9 0.00034 38.7 4.3 53 169-224 235-290 (478)
106 2a87_A TRXR, TR, thioredoxin r 53.5 9.1 0.00031 36.7 3.8 55 169-226 202-257 (335)
107 2jae_A L-amino acid oxidase; o 52.4 22 0.00076 36.0 6.7 43 173-219 252-294 (489)
108 2a8x_A Dihydrolipoyl dehydroge 52.2 11 0.00037 38.2 4.3 59 169-231 223-283 (464)
109 3dgh_A TRXR-1, thioredoxin red 52.1 9.7 0.00033 38.8 3.9 56 169-226 238-294 (483)
110 2bcg_G Secretory pathway GDP d 51.6 14 0.00048 37.3 4.9 46 169-220 253-299 (453)
111 2ivd_A PPO, PPOX, protoporphyr 51.3 20 0.00068 36.2 6.1 50 172-226 249-299 (478)
112 1yvv_A Amine oxidase, flavin-c 51.2 14 0.00048 35.1 4.7 49 172-226 119-167 (336)
113 3dgz_A Thioredoxin reductase 2 50.4 13 0.00045 37.9 4.6 55 169-225 236-291 (488)
114 1vg0_A RAB proteins geranylger 50.2 15 0.0005 39.1 4.9 45 169-218 389-434 (650)
115 2gv8_A Monooxygenase; FMO, FAD 50.0 11 0.00037 38.0 3.8 63 160-226 118-182 (447)
116 3nks_A Protoporphyrinogen oxid 50.0 9.6 0.00033 38.5 3.5 51 169-226 245-295 (477)
117 3gwf_A Cyclohexanone monooxyge 49.0 4.9 0.00017 41.9 1.1 61 160-226 90-152 (540)
118 2r0c_A REBC; flavin adenine di 48.3 38 0.0013 35.1 7.8 47 175-224 152-199 (549)
119 2dkh_A 3-hydroxybenzoate hydro 48.2 23 0.00079 37.6 6.2 52 172-224 157-214 (639)
120 3lad_A Dihydrolipoamide dehydr 48.0 20 0.00069 36.3 5.5 52 169-224 232-283 (476)
121 3fmw_A Oxygenase; mithramycin, 47.6 18 0.0006 37.9 5.1 56 161-221 152-207 (570)
122 2aqj_A Tryptophan halogenase, 47.3 11 0.00039 39.0 3.5 53 161-220 169-221 (538)
123 2hqm_A GR, grase, glutathione 47.0 11 0.00036 38.5 3.2 59 169-231 237-296 (479)
124 2pyx_A Tryptophan halogenase; 46.0 15 0.00051 37.9 4.2 52 161-219 179-231 (526)
125 1ebd_A E3BD, dihydrolipoamide 45.4 15 0.0005 37.1 3.9 53 169-225 222-274 (455)
126 3dk9_A Grase, GR, glutathione 45.0 17 0.00057 37.0 4.3 55 169-224 239-296 (478)
127 4dna_A Probable glutathione re 43.8 7.1 0.00024 39.6 1.3 51 169-225 222-272 (463)
128 1gte_A Dihydropyrimidine dehyd 43.3 45 0.0015 37.6 7.8 60 170-231 382-454 (1025)
129 4ap3_A Steroid monooxygenase; 43.1 6.7 0.00023 41.0 1.0 61 160-226 102-164 (549)
130 1dxl_A Dihydrolipoamide dehydr 42.6 11 0.00037 38.3 2.4 54 169-225 229-283 (470)
131 4g6h_A Rotenone-insensitive NA 42.2 18 0.0006 37.2 4.0 44 470-516 354-398 (502)
132 3oc4_A Oxidoreductase, pyridin 42.1 27 0.00093 35.0 5.4 55 163-226 195-249 (452)
133 3qj4_A Renalase; FAD/NAD(P)-bi 42.1 20 0.00067 34.4 4.1 48 172-226 123-170 (342)
134 2gag_A Heterotetrameric sarcos 42.0 42 0.0014 37.5 7.3 61 169-230 327-392 (965)
135 3uox_A Otemo; baeyer-villiger 41.3 8.7 0.0003 40.0 1.5 62 160-227 90-153 (545)
136 3k7m_X 6-hydroxy-L-nicotine ox 41.2 17 0.00059 36.0 3.7 43 169-219 215-257 (431)
137 1fec_A Trypanothione reductase 40.9 9.8 0.00034 39.0 1.8 57 169-231 242-300 (490)
138 3i6d_A Protoporphyrinogen oxid 40.8 40 0.0014 33.6 6.4 47 173-226 248-294 (470)
139 3lzw_A Ferredoxin--NADP reduct 40.5 23 0.0008 33.3 4.4 59 159-225 69-128 (332)
140 2gqw_A Ferredoxin reductase; f 40.4 15 0.00053 36.4 3.1 53 169-232 198-250 (408)
141 2vvm_A Monoamine oxidase N; FA 40.3 39 0.0013 34.2 6.3 44 170-220 268-311 (495)
142 2wpf_A Trypanothione reductase 40.1 11 0.00037 38.7 1.9 50 169-224 246-295 (495)
143 4at0_A 3-ketosteroid-delta4-5a 38.5 21 0.00073 36.6 3.9 61 452-517 445-509 (510)
144 3d1c_A Flavin-containing putat 38.0 19 0.00065 34.7 3.3 54 161-223 92-145 (369)
145 3uox_A Otemo; baeyer-villiger 37.1 22 0.00075 36.9 3.8 47 159-219 341-389 (545)
146 3l8k_A Dihydrolipoyl dehydroge 37.0 17 0.00057 36.9 2.8 57 173-231 226-283 (466)
147 1xdi_A RV3303C-LPDA; reductase 37.0 15 0.00052 37.5 2.5 50 169-225 234-283 (499)
148 4dgk_A Phytoene dehydrogenase; 36.9 19 0.00064 36.6 3.2 40 475-518 452-491 (501)
149 2b9w_A Putative aminooxidase; 36.8 14 0.00049 36.6 2.2 42 173-222 218-259 (424)
150 1sez_A Protoporphyrinogen oxid 36.8 10 0.00035 38.7 1.1 53 173-226 256-313 (504)
151 3lov_A Protoporphyrinogen oxid 36.3 25 0.00086 35.4 4.0 46 173-226 249-294 (475)
152 3ntd_A FAD-dependent pyridine 36.2 34 0.0012 35.4 5.1 58 169-232 203-278 (565)
153 3o0h_A Glutathione reductase; 36.2 30 0.001 35.2 4.6 56 169-231 243-300 (484)
154 1ges_A Glutathione reductase; 35.9 14 0.00047 37.3 1.9 57 169-231 219-277 (450)
155 2cdu_A NADPH oxidase; flavoenz 35.9 15 0.00051 37.0 2.2 51 169-226 202-252 (452)
156 3h28_A Sulfide-quinone reducta 35.4 30 0.001 34.4 4.4 59 161-228 204-262 (430)
157 1cjc_A Protein (adrenodoxin re 34.4 62 0.0021 32.6 6.6 52 171-223 270-335 (460)
158 3k30_A Histamine dehydrogenase 34.1 38 0.0013 36.3 5.2 53 169-228 578-631 (690)
159 2r9z_A Glutathione amide reduc 34.0 31 0.0011 34.8 4.2 57 169-231 218-276 (463)
160 1b37_A Protein (polyamine oxid 32.5 32 0.0011 34.7 4.1 41 172-219 228-268 (472)
161 3hyw_A Sulfide-quinone reducta 32.3 48 0.0016 33.0 5.3 50 469-518 275-332 (430)
162 1y56_A Hypothetical protein PH 32.2 28 0.00095 35.5 3.6 56 169-231 268-323 (493)
163 3c96_A Flavin-containing monoo 32.1 83 0.0028 30.8 7.0 53 171-227 122-175 (410)
164 3ics_A Coenzyme A-disulfide re 31.8 25 0.00087 36.7 3.2 55 169-232 239-293 (588)
165 3cgb_A Pyridine nucleotide-dis 31.7 28 0.00097 35.3 3.5 55 169-231 238-292 (480)
166 1fl2_A Alkyl hydroperoxide red 30.9 33 0.0011 32.0 3.7 54 161-220 60-114 (310)
167 1onf_A GR, grase, glutathione 30.7 17 0.00059 37.2 1.7 50 169-223 228-277 (500)
168 2zbw_A Thioredoxin reductase; 30.3 47 0.0016 31.3 4.7 57 161-225 69-126 (335)
169 2iid_A L-amino-acid oxidase; f 29.2 60 0.0021 32.8 5.5 41 174-219 254-296 (498)
170 4g6h_A Rotenone-insensitive NA 28.8 31 0.0011 35.3 3.2 51 169-224 283-335 (502)
171 1w4x_A Phenylacetone monooxyge 28.8 22 0.00076 36.8 2.1 49 173-226 111-159 (542)
172 2vou_A 2,6-dihydroxypyridine h 28.7 55 0.0019 32.0 5.0 51 171-228 110-160 (397)
173 1ojt_A Surface protein; redox- 28.4 28 0.00097 35.3 2.8 53 169-226 237-291 (482)
174 3iwa_A FAD-dependent pyridine 28.0 60 0.0021 32.6 5.2 46 169-219 77-123 (472)
175 3f8d_A Thioredoxin reductase ( 27.2 63 0.0021 30.0 4.9 51 161-220 74-124 (323)
176 3cgb_A Pyridine nucleotide-dis 27.2 98 0.0033 31.2 6.7 45 170-219 105-150 (480)
177 2vdc_G Glutamate synthase [NAD 26.8 26 0.00089 35.4 2.1 49 170-221 314-378 (456)
178 3gwf_A Cyclohexanone monooxyge 26.5 37 0.0013 35.2 3.3 52 155-219 329-382 (540)
179 4ap3_A Steroid monooxygenase; 26.4 50 0.0017 34.2 4.3 47 159-219 346-394 (549)
180 3ics_A Coenzyme A-disulfide re 26.3 59 0.002 33.8 4.9 51 169-226 104-155 (588)
181 2yg5_A Putrescine oxidase; oxi 26.0 47 0.0016 33.1 3.9 43 172-221 226-268 (453)
182 4eqs_A Coenzyme A disulfide re 26.0 73 0.0025 31.7 5.4 47 169-219 68-114 (437)
183 3h8l_A NADH oxidase; membrane 26.0 69 0.0023 31.4 5.1 45 169-219 67-111 (409)
184 1xhc_A NADH oxidase /nitrite r 25.8 29 0.00098 33.8 2.2 58 162-232 188-245 (367)
185 1nhp_A NADH peroxidase; oxidor 25.6 1E+02 0.0035 30.6 6.4 45 170-219 68-113 (447)
186 1s3e_A Amine oxidase [flavin-c 24.7 36 0.0012 34.8 2.8 44 172-222 226-269 (520)
187 1y0p_A Fumarate reductase flav 24.0 53 0.0018 34.1 4.0 61 452-517 503-567 (571)
188 3ab1_A Ferredoxin--NADP reduct 23.7 51 0.0017 31.6 3.5 59 161-226 78-137 (360)
189 1lqt_A FPRA; NADP+ derivative, 23.5 76 0.0026 31.9 4.9 50 171-223 265-328 (456)
190 4a5l_A Thioredoxin reductase; 23.5 1.5E+02 0.0053 27.2 6.9 56 169-226 199-255 (314)
191 3ntd_A FAD-dependent pyridine 23.2 84 0.0029 32.3 5.3 51 169-226 69-120 (565)
192 2q0l_A TRXR, thioredoxin reduc 22.9 93 0.0032 28.8 5.2 50 161-219 63-112 (311)
193 1rsg_A FMS1 protein; FAD bindi 22.4 55 0.0019 33.4 3.7 40 173-218 215-254 (516)
194 3qfa_A Thioredoxin reductase 1 22.2 1E+02 0.0034 31.5 5.6 56 169-225 261-319 (519)
195 3alj_A 2-methyl-3-hydroxypyrid 22.1 56 0.0019 31.6 3.5 53 161-224 111-163 (379)
196 3rp8_A Flavoprotein monooxygen 21.4 1.1E+02 0.0037 29.8 5.5 48 173-227 140-187 (407)
197 1hyu_A AHPF, alkyl hydroperoxi 21.3 64 0.0022 33.0 3.9 53 161-219 271-324 (521)
198 1ps9_A 2,4-dienoyl-COA reducta 21.3 53 0.0018 35.0 3.3 50 169-226 584-633 (671)
199 1y56_A Hypothetical protein PH 21.1 1.2E+02 0.0041 30.7 5.9 48 170-221 172-219 (493)
200 2z3y_A Lysine-specific histone 20.6 1.8E+02 0.006 30.8 7.3 44 172-218 410-455 (662)
201 1qo8_A Flavocytochrome C3 fuma 20.5 70 0.0024 33.1 4.0 61 452-517 498-562 (566)
202 3sx6_A Sulfide-quinone reducta 20.1 1.1E+02 0.0038 30.2 5.3 64 162-231 213-279 (437)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=3.6e-90 Score=736.47 Aligned_cols=476 Identities=27% Similarity=0.359 Sum_probs=407.6
Q ss_pred CCcccceeecccccCcccCCCCceeeeecCcccchhhHhhcceeecCChhhHHHHHHh-CCCCCCchhhHHHHHHhccCC
Q psy14407 7 LSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGYDETLKYFVKSEDYR 85 (522)
Q Consensus 7 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~-g~~~w~~~~l~pyy~~~e~~~ 85 (522)
++.+||.|.++||+ +++++.+.++|||+|||||+||+|+|.|+.+.|||.|++. |+++|+|++|+|||+|+|++.
T Consensus 56 ~~~~~w~~~t~pq~----~~~~r~~~~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~ 131 (566)
T 3fim_B 56 NSIFDWNYTTTAQA----GYNGRSIAYPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVV 131 (566)
T ss_dssp SSTTBCCCBCCCCG----GGTTCCCBCCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEEC
T ss_pred CCccccccccccCC----CCCCceEeccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccC
Confidence 47899999999999 5789999999999999999999999999999999999998 999999999999999999997
Q ss_pred CCCC------CCCCCCcCCCCcEeeecCCCCCCchHHHHHHHHHHHc--CCCCCCCCCCCCcccceeeecccccCCeecc
Q psy14407 86 SVIY------NESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQEL--GYPCPKDMNDRYVDVGFAELPGMTRYGLRFS 157 (522)
Q Consensus 86 ~~~~------~~~~~~~g~~gp~~v~~~~~~~~~~~~~~~~~a~~~~--G~~~~~~~n~~~~~~G~~~~~~~~~~g~R~s 157 (522)
.+.. ..++..||..||++++++++. .++...|.++++++ |++...|+|++. ..|++.++.++++|.|+|
T Consensus 132 ~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~~--~~~~~~~~~a~~~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~R~s 208 (566)
T 3fim_B 132 PPADNHNTSGEFIPAVHGTNGSVSISLPGFP--TPLDDRVLATTQEQSEEFFFNPDMGTGH-PLGISWSIASVGNGQRSS 208 (566)
T ss_dssp CCTTCCCCTTTSCGGGSCBSSSEEEBSCSSC--CTHHHHHHHHHHHTHHHHCBCSCGGGSC-CCEEEECCBSEETTEECC
T ss_pred CccccccccccCCccccCCCCCeeeecCCCC--CHHHHHHHHHHHHHhcCCCccCCCCCCC-cceEEeeeeecCCCEEcC
Confidence 6532 123578999999999988877 89999999999999 999888999888 899999999999999999
Q ss_pred hhhhhcccccCCCCCeEEEcCcEEEEEEec---CC-CeEEEEEEEecCC-eEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 158 AADAYLTPIAGKRTNLYVLKRSKVTKVIIN---DQ-NVATGVEYVNSKG-ETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 158 ~~~~~l~~~~~~~~n~~v~~~~~V~~I~~~---~~-~~a~gV~~~~~~g-~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
+..+||.++. .++|++|++++.|+||+++ ++ ++|+||++.+.+| +.++++|+|+||||||||+||+|||+||||
T Consensus 209 a~~ayL~p~~-~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIG 287 (566)
T 3fim_B 209 SSTAYLRPAQ-SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIG 287 (566)
T ss_dssp HHHHTHHHHT-TCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEE
T ss_pred HHHHHhhhhc-cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCC
Confidence 9999999988 8999999999999999997 34 6999999997446 889999999999999999999999999999
Q ss_pred ChhhhhhCCCCceeecc-ccccccccccccccEEEecCCC-cc----c-cchHHHHHHHHhcCCCCccccccccEEEEEe
Q psy14407 233 PKAHLDEVKIPVKQDLR-VGENLKLNAQFTGPVMAFSAPL-KR----T-VYSQEMVFKYLVNRIGPLSNAGLWSFTGYID 305 (522)
Q Consensus 233 ~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~-~~----~-~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~ 305 (522)
|+++|+++||+++.|+| ||+||+||+.+. +.|..+... .. . ........+|...+.||++..+ ....+|++
T Consensus 288 p~~~L~~~gI~vv~dlPgVG~NLqDH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~-~~~~~f~~ 365 (566)
T 3fim_B 288 DENDLSSVGIDTIVNNPSVGRNLSDHLLLP-AAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALI-ANHLAWLR 365 (566)
T ss_dssp CHHHHHHTTCCCSEECTTTTCSBBCCEEEC-CEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCS-CSEEEEEC
T ss_pred ChHHHhhcCCCceecCcchhhhhhcCccce-EEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccCh-hhheeeec
Confidence 99999999999999999 999999999985 888776552 11 1 1123456789888999998765 36778887
Q ss_pred CCCC-------------CCCCchhhhhhhcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEeecccCcceEE
Q psy14407 306 TLQN-------------TARPDLEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSLVNPKSCGKV 372 (522)
Q Consensus 306 ~~~~-------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v 372 (522)
.... ...|++++++.+... .. .+........+++...+++|.|||+|
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~---------------~~-----~~~~~~~~~~~~~~~~l~~P~SrG~V 425 (566)
T 3fim_B 366 LPSNSSIFQTFPDPAAGPNSAHWETIFSNQWF---------------HP-----AIPRPDTGSFMSVTNALISPVARGDI 425 (566)
T ss_dssp CCTTCGGGGTSCCCSSSTTSCSEEEEEESSCC---------------CT-----TSCCCSSCCEEEEEEEESSCSCCBEE
T ss_pred cccchhhhhhhccccccCCCCCEEEEecccch---------------hh-----cccCCCCCCEEEEEEeecCCccceEE
Confidence 6421 134555543322111 00 00111123567788888999999999
Q ss_pred EecCCCCCCCceeecCCCCChHHHHHHHHHHHHHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhhCCCC
Q psy14407 373 TLKSADPLAPPCIDTGILSEPEDLATLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTT 452 (522)
Q Consensus 373 ~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 452 (522)
+|+++||++.|.|+++|+.++.|++.+.++++.+++++++++++.+...+.. |++ ....+|++|++|+|....+.
T Consensus 426 ~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---P~~--~~~~sd~~~~~~ir~~~~t~ 500 (566)
T 3fim_B 426 KLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADFVIRPFD---PRL--RDPTDDAAIESYIRDNANTI 500 (566)
T ss_dssp ECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTTTEEEESS---GGG--SCTTCHHHHHHHHHHHCEEC
T ss_pred EecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCCccccccC---CCc--ccccchHHHHHHHhhccccc
Confidence 9999999999999999999999999999999999999999888887654432 332 23579999999999999999
Q ss_pred CcccccccccCCCCCCcccCCCCceeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhh
Q psy14407 453 SNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTS 517 (522)
Q Consensus 453 ~H~~Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~ 517 (522)
+|++||||||++++..+|||++|||||++||||||+||||+.+++||++|+||||||+||+|+++
T Consensus 501 ~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 501 FHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp SCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred ccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999998865449999999999999999999999999999999999999999999999875
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.8e-85 Score=699.57 Aligned_cols=482 Identities=23% Similarity=0.301 Sum_probs=379.8
Q ss_pred CCCCCcccceeecccccCcccCCCCceeeeecCcccchhhHhhcceeecCChhhHHHHHHhCCC-CCCchhhHHHHHHhc
Q psy14407 4 VLSLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYN-GWGYDETLKYFVKSE 82 (522)
Q Consensus 4 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~g~~-~w~~~~l~pyy~~~e 82 (522)
.++++++||.|.|+||. ..++.+.++|||+|||||.||+|+|.|+.+.|||.|+++|+. +|+|++|+|||+|+|
T Consensus 70 ~~~~~~~~w~~~t~~q~-----~~~r~~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E 144 (583)
T 3qvp_A 70 DIFGSSVDHAYETVELA-----TNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAE 144 (583)
T ss_dssp TTTTSTTBCCEECCCCT-----TTSCCCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHE
T ss_pred hhcCCcccCCccccccC-----CCCCeeeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHH
Confidence 44578899999999997 478899999999999999999999999999999999999777 999999999999999
Q ss_pred cCCCCCC-------CCCCCCcCCCCcEeeecC---CCCCCchHHHHHHHHHHHcCCCCCCCCCCCCcccceeeeccccc-
Q psy14407 83 DYRSVIY-------NESKAVHGTQGYLPVGLF---KNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTR- 151 (522)
Q Consensus 83 ~~~~~~~-------~~~~~~~g~~gp~~v~~~---~~~~~~~~~~~~~~a~~~~G~~~~~~~n~~~~~~G~~~~~~~~~- 151 (522)
++..+.. ..+..+||..||++++++ ... .++...|.++++++|++...|+|++. ..|++.++.++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~~~~--~~~~~~~~~a~~~~G~~~~~D~n~~~-~~G~~~~~~t~~~ 221 (583)
T 3qvp_A 145 RARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDY--SPIVKALMSAVEDRGVPTKKDFGCGD-PHGVSMFPNTLHE 221 (583)
T ss_dssp EECCCCHHHHHHTCCCCGGGSCSSSSEEEBCCCCSSCB--CTHHHHHHHHHHTTTCCBCCCTTSSC-CCEEECCCBSBCT
T ss_pred hccCCcchhhcccccCCccccCCCCCEEecCCCCcccC--CHHHHHHHHHHHHcCCCcCCCCCCCC-CceecccceeEcC
Confidence 9875431 123678999999999876 233 68899999999999999888999988 889988888774
Q ss_pred CCeecchhhhhcccccCCCCCeEEEcCcEEEEEEecC---CCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHH
Q psy14407 152 YGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND---QNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLL 228 (522)
Q Consensus 152 ~g~R~s~~~~~l~~~~~~~~n~~v~~~~~V~~I~~~~---~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~ 228 (522)
.|.|+|+..+||.+++ +++|++|++++.|+||++++ +++|+||++.+.+|+.++++|+|+||||||+|+||+|||+
T Consensus 222 ~g~R~saa~ayL~p~~-~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~l 300 (583)
T 3qvp_A 222 DQVRSDAAREWLLPNY-QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEY 300 (583)
T ss_dssp TCBBCCHHHHHTTTTT-TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHH
T ss_pred CCcEecHHHHHHHHhh-cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHH
Confidence 7999999999999988 89999999999999999982 6799999999558999999999999999999999999999
Q ss_pred hCCCChhhhhhCCCCceeeccccccccccccccccEEEecCCCc--c-----ccc------hHHHHHHHHhcCCCCcccc
Q psy14407 229 SGIGPKAHLDEVKIPVKQDLRVGENLKLNAQFTGPVMAFSAPLK--R-----TVY------SQEMVFKYLVNRIGPLSNA 295 (522)
Q Consensus 229 SGig~~~~l~~~gi~~~~~~pVG~~l~dh~~~~~~~~~~~~~~~--~-----~~~------~~~~~~~~~~~~~g~~~~~ 295 (522)
|||||+++|+++||+++.|+|||+||+||+.+. +.+.++.... . ... .......|+....+.+...
T Consensus 301 SGIGp~~~L~~~GI~vv~dLPVG~NLqDH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
T 3qvp_A 301 SGIGMKSILEPLGIDTVVDLPVGLNLQDQTTAT-VRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEE 379 (583)
T ss_dssp TTBSCHHHHGGGTCCCSBCCCTTCCBBCCEEEE-EEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHH
T ss_pred cCCCCHHHHHhCCCCceeeCccccchhhCccce-EEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhcc
Confidence 999999999999999999999999999999984 7887764310 0 000 0011112221111111100
Q ss_pred ccccEEEEEeCCCCCCCCchhhhhhhcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEeecccCcceEEEec
Q psy14407 296 GLWSFTGYIDTLQNTARPDLEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSLVNPKSCGKVTLK 375 (522)
Q Consensus 296 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~ 375 (522)
. .....|. ..++++..+.... + ..+.......+. .......+.+....++|.|||+|+|+
T Consensus 380 ~-~~~~~~~------~~~~~~~~~~~~~----~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~P~SrG~v~l~ 439 (583)
T 3qvp_A 380 A-VARGGFH------NTTALLIQYENYR----D--WIVNHNVAYSEL-------FLDTAGVASFDVWDLLPFTRGYVHIL 439 (583)
T ss_dssp H-HHTTSCS------CHHHHHHHHHHHH----H--HHHHSCCEEEEE-------EEECTTSEEEEEEESSCCCCBEEEES
T ss_pred c-ccccCcc------ccHHHHhhhccch----h--hhccCCCCccee-------eeccCCCceeeeeecccCCceEEEec
Confidence 0 0000000 0111111110000 0 000000000000 00001233444555899999999999
Q ss_pred CCCCCCCcee-ecCCCCChHHHHHHHHHHHHHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhhCCCCCc
Q psy14407 376 SADPLAPPCI-DTGILSEPEDLATLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSN 454 (522)
Q Consensus 376 ~~d~~~~p~i-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H 454 (522)
++||++.|.| +++|+.++.|++.+.++++++++++++++++.+...+. .|+|......+|++|++|+|....+.+|
T Consensus 440 s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~pg~~~~~~~sd~~~~~~~r~~~~t~~H 516 (583)
T 3qvp_A 440 DKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTYFAGET---IPGDNLAYDADLSAWTEYIPYHFRPNYH 516 (583)
T ss_dssp SSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEEE---ESGGGSCTTCCHHHHHHHGGGSCEECSC
T ss_pred CCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhCcchhhcccccc---CCCcccccCCCHHHHHHHHHhccCCCcC
Confidence 9999999999 99999999999999999999999999999988765443 3555444457999999999999999999
Q ss_pred ccccccccCCCCCCcccCCCCceeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhhcC
Q psy14407 455 PVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYN 519 (522)
Q Consensus 455 ~~Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~~~ 519 (522)
++||||||++++ ++|||++|||||++||||||+||||+.+++||++|+||||||+||+|+++++
T Consensus 517 ~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 517 GVGTCSMMPKEM-GGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp CBCTTCBSCGGG-TCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeCCCCCC-CceECCCCeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 999999998765 5999999999999999999999999999999999999999999999998864
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.7e-83 Score=686.58 Aligned_cols=476 Identities=27% Similarity=0.389 Sum_probs=391.1
Q ss_pred CCCCCcccceeecccccCcccCCCCceee------eecCcccchhhHhhcceeecCChhhHHHHHHhCCCCCCchhhHHH
Q psy14407 4 VLSLSEFDHAYLAEPSQFAGLGVRNARIK------ITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKY 77 (522)
Q Consensus 4 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~------~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~g~~~w~~~~l~py 77 (522)
.++++++||+|.|+. .++.+. ++|||+|||||++|+|+|.|+.+.|||.|+++|+++|+|+++.||
T Consensus 57 ~~~~~~~dW~y~t~~--------~~r~~~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpy 128 (577)
T 3q9t_A 57 DLRNSKYDWAYKTTM--------VRRDDYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPY 128 (577)
T ss_dssp GGTTSTTBCCEEEEE--------EEETTEEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHH
T ss_pred hccCCCcccceEEEE--------CCccccccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHH
Confidence 456788999999982 244445 999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCC--CCCCCcCCCCcEeeecCCCC-CCchHHHHHHHHHHHcCCCCCCCCCCCCcccceeeecccccCCe
Q psy14407 78 FVKSEDYRSVIYN--ESKAVHGTQGYLPVGLFKNK-ENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGL 154 (522)
Q Consensus 78 y~~~e~~~~~~~~--~~~~~~g~~gp~~v~~~~~~-~~~~~~~~~~~a~~~~G~~~~~~~n~~~~~~G~~~~~~~~~~g~ 154 (522)
|+|.|++...... .+...||..||++++.+.+. ...++...|.++++++|++...|+|.+. ..|++.++..+..|.
T Consensus 129 f~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~ 207 (577)
T 3q9t_A 129 LRKSATYHDDPRLYSPELEKIGGGGPIPISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGE-MDGLTHCCDTIYRGQ 207 (577)
T ss_dssp HHHTEEEECTTCCSCGGGGGGCCSCSEEEEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSC-CCEEEECEESEETTE
T ss_pred HHHHhccCCCccccCCccccCCCCCCEEeeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCC-cCeEEeecceecCCe
Confidence 9999998754322 12346899999999987654 1135788899999999999988999888 889998888888999
Q ss_pred ecchhhhhcccccCCCCCeEEEcCcEEEEEEec-CCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCCC
Q psy14407 155 RFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIN-DQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 233 (522)
Q Consensus 155 R~s~~~~~l~~~~~~~~n~~v~~~~~V~~I~~~-~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig~ 233 (522)
|+++. .|+ . .++|++|++++.|+||+++ ++++|+||++.+.+|+.++++|+|+||||||+|+||+|||+|||||
T Consensus 208 R~s~~-~~l---~-~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp 282 (577)
T 3q9t_A 208 RSGSF-LFV---K-NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGP 282 (577)
T ss_dssp ECCGG-GGS---S-SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEEC
T ss_pred EeeHH-HHH---h-cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCC
Confidence 99875 564 4 7899999999999999998 4679999999974589999999999999999999999999999999
Q ss_pred hhhhhhCCCCceeecc-ccccccccccccccEEEecCCC------cc-ccchHHHHHHHHhcCCCCccccccccEEEEEe
Q psy14407 234 KAHLDEVKIPVKQDLR-VGENLKLNAQFTGPVMAFSAPL------KR-TVYSQEMVFKYLVNRIGPLSNAGLWSFTGYID 305 (522)
Q Consensus 234 ~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~ 305 (522)
+++|+++||+++.|+| ||+||+||+.+. +.+.++... .. .........+|...+.||++.. .....+|.+
T Consensus 283 ~~~L~~~GI~vv~dlP~VG~nl~DH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~-~~~~~~~~~ 360 (577)
T 3q9t_A 283 TRELSRHGINTIVDSRHVGQNLMDHPGVP-FVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSG-LLELVGFPR 360 (577)
T ss_dssp HHHHHTTTCCCSEECTTTTEEEBCCEEEE-EEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGCC-SEEEEEECC
T ss_pred HHHHHHcCCCeeccCchhhhhhhcCccee-EEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcccc-hhheeEEee
Confidence 9999999999999999 999999999985 888877641 11 1123456778888899999854 335666654
Q ss_pred CCC----------------------CCCCCchhhhhhhcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEee
Q psy14407 306 TLQ----------------------NTARPDLEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSL 363 (522)
Q Consensus 306 ~~~----------------------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (522)
... ....|++++.+.+... . .+... .........+++...+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~-------~~~~~-------~~~~~~~~~~~~~~~l 423 (577)
T 3q9t_A 361 IDKYLEKDAEYRKAKAANGGKDPFSPLGQPHFELDFVCMFG---T-------AFQWH-------FPTPKTGDHLTVVVDL 423 (577)
T ss_dssp CHHHHTTCHHHHHHHHHTTTSCSSCTTSCCSEEEEEESSCC---G-------GGCSS-------SCCCSSSEEEEEEEEE
T ss_pred cChhhhcchhhhhhhhccccccccCCCCCceEEEEeccccc---c-------ccccc-------ccCCCCCCEEEEEEEe
Confidence 321 0023333333222110 0 00000 0011123467778888
Q ss_pred cccCcce-EEEecCCCCCCCceeecCCCCChHHHHHHHHHHHHHHHHh-cChhHHhhcccccccCCccCCCCCCCCHHHH
Q psy14407 364 VNPKSCG-KVTLKSADPLAPPCIDTGILSEPEDLATLIRGTDYITRLE-QTEAIRLAGGTLMSLNLEACSQYPWRSTHSW 441 (522)
Q Consensus 364 ~~p~s~g-~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 441 (522)
++|.||| +|+|.++||++.|.|+++|+.++.|++.++++++.+++++ +.++++.+...+.. |+ ....+|++|
T Consensus 424 ~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~---p~---~~~~sd~~~ 497 (577)
T 3q9t_A 424 VRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEYP---WE---MPLDSDKEM 497 (577)
T ss_dssp SSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHHHSTTGGGTEEEEES---SC---CCTTCHHHH
T ss_pred eeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHHHHHHHHhChhhhhccccccC---CC---CCcCCHHHH
Confidence 9999999 9999999999999999999999999999999999999999 88888887655542 22 345899999
Q ss_pred HHHHHhhCCCCCcccccccccCCCCCCcccCCCCceeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhhcC
Q psy14407 442 TCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYN 519 (522)
Q Consensus 442 ~~~~~~~~~~~~H~~Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~~~ 519 (522)
++|+|....+.+|++||||||++++ ++|||++|||||++||||||+||||+.+++||++|+||||||+||+|+++++
T Consensus 498 ~~~ir~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~ 574 (577)
T 3q9t_A 498 HRAVLDRCQTAFHPTGTARLSKNID-QGVVDPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHK 574 (577)
T ss_dssp HHHHHHHCEECSCCBCTTCBCSSTT-TCSBCTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHhccccccccccceecCCCCC-CceECCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999998865 5999999999999999999999999999999999999999999999999875
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=8.8e-83 Score=686.23 Aligned_cols=481 Identities=23% Similarity=0.283 Sum_probs=378.4
Q ss_pred CCCCcccceeecccccCcccCCCCceeeeecCcccchhhHhhcceeecCChhhHHHHHHh-CCCCCCchhhHHHHHHhcc
Q psy14407 5 LSLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGYDETLKYFVKSED 83 (522)
Q Consensus 5 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~-g~~~w~~~~l~pyy~~~e~ 83 (522)
++++.++|.|.++| ++.++.+.+.+||+|||||+||+|+|+|+.+.||+.|+++ |+.+|+|++|+|||+|+|+
T Consensus 76 ~~~~~~~w~~~t~p------~~~~~~~~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~ 149 (587)
T 1gpe_A 76 IFGTTVDQNYLTVP------LINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEA 149 (587)
T ss_dssp TTTSTTBCCEECCC------CTTSCCCEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEE
T ss_pred ccCCcccccccccc------CCCCceeeeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhc
Confidence 44577899999988 2478899999999999999999999999999999999998 9999999999999999999
Q ss_pred CCCCCC------C-CCCCCcCCCCcEeeecC---CCCCCchHHHHHHHHHHHcCCCCCCCCCCCCcccceeeecccc-cC
Q psy14407 84 YRSVIY------N-ESKAVHGTQGYLPVGLF---KNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMT-RY 152 (522)
Q Consensus 84 ~~~~~~------~-~~~~~~g~~gp~~v~~~---~~~~~~~~~~~~~~a~~~~G~~~~~~~n~~~~~~G~~~~~~~~-~~ 152 (522)
+++++. . .++.+||..||++++++ ... ++..+.|.++++++|++...|+|++. +.|++.|++++ .+
T Consensus 150 ~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~~~~~~~~--~~~~~~~~~a~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~~ 226 (587)
T 1gpe_A 150 ARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPW--SPIMKALMNTVSALGVPVQQDFLCGH-PRGVSMIMNNLDEN 226 (587)
T ss_dssp ECCCCHHHHHHTCCCCGGGCCBSSSEEEBCCCCSSCB--CTHHHHHHHHHHHTTCCBSCCTTSSC-CCEEECCEESBCTT
T ss_pred ccCCcccccccccccCccccCCCCCEEEccCCCcCCC--CHHHHHHHHHHHHcCCCcCCCCCCCC-CCEEEecceEECCC
Confidence 987631 1 23678999999999865 244 78999999999999999888899888 88999888765 47
Q ss_pred CeecchhhhhcccccCCCCCeEEEcCcEEEEEEec-CC--CeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHh
Q psy14407 153 GLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIN-DQ--NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLS 229 (522)
Q Consensus 153 g~R~s~~~~~l~~~~~~~~n~~v~~~~~V~~I~~~-~~--~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~S 229 (522)
|+|+|+..+||.++. .++|++|++++.|+||+++ ++ ++|+||++.+.+|+.++++|+|+||||||+|+||+|||+|
T Consensus 227 g~R~sa~~~~l~~~~-~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~S 305 (587)
T 1gpe_A 227 QVRVDAARAWLLPNY-QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYS 305 (587)
T ss_dssp CCBCCHHHHHTTTTT-TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHT
T ss_pred CcccCHHHHHHHHhh-cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhC
Confidence 899999999998877 8999999999999999997 22 5999999985589999999988999999999999999999
Q ss_pred CCCChhhhhhCCCCceeeccccccccccccccccEEEecCCC--cccc-chHHHHHHHHhcCCCCccccccccEEEEEeC
Q psy14407 230 GIGPKAHLDEVKIPVKQDLRVGENLKLNAQFTGPVMAFSAPL--KRTV-YSQEMVFKYLVNRIGPLSNAGLWSFTGYIDT 306 (522)
Q Consensus 230 Gig~~~~l~~~gi~~~~~~pVG~~l~dh~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~ 306 (522)
||||+++|+++||+++.|+|||+||+||+... +.+.+++.. .... .......+|...+.|++..... ....|.+.
T Consensus 306 GIGp~~~L~~~gI~vv~dlPVG~nL~DH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~~ 383 (587)
T 1gpe_A 306 GIGLKSVLDQANVTQLLDLPVGINMQDQTTTT-VSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNT-KLDQWAEE 383 (587)
T ss_dssp TEECHHHHHHTTCCCSEECCTTCSBBCCEEEE-EEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHH-SHHHHHHH
T ss_pred CCCCHHHHHhCCCCeEEeCCCCcchhcCcccc-eEEEeCCCcccccchHHHHHHHHHHHhCCCCCcccccc-ceeeEeec
Confidence 99999999999999999999999999999984 777776441 1110 0011123343333333321100 00011110
Q ss_pred CC-CCC-------CCchhhhhhhcccccchhhhhHhhhcccchHHHHHHhhc-CCCCCeEEEEEeecccCcceEEEecCC
Q psy14407 307 LQ-NTA-------RPDLEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNL-NKRTDMGVISMSLVNPKSCGKVTLKSA 377 (522)
Q Consensus 307 ~~-~~~-------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~s~g~v~l~~~ 377 (522)
.. ... .|+++..+.+. ....+.. .+. ......+++...+++|.|||+|+|+++
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~------~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~ 445 (587)
T 1gpe_A 384 TVARGGFHNVTALKVQYENYRNWL------------LDEDVAF------AELFMDTEGKINFDLWDLIPFTRGSVHILSS 445 (587)
T ss_dssp HHHTTSCSCHHHHHHHHHHHHHHH------------HHSCCEE------EEEEEECTTEEEEEEEESSCCCCBEEEESSS
T ss_pred ccccccccccccccccHHHHhhhc------------cCCCCcc------eeeeecCCCcEEEEEEecCCccceeEEeCCC
Confidence 00 000 00000000000 0000000 000 001234666777899999999999999
Q ss_pred CCCCCc-eeecCCCCChHHHHHHHHHHHHHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhhCCCCCccc
Q psy14407 378 DPLAPP-CIDTGILSEPEDLATLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPV 456 (522)
Q Consensus 378 d~~~~p-~i~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 456 (522)
||++.| .|+++|+.++.|++.+.++++.+++++++.+++.+...+. .|+.......+++++++|++....+.+|++
T Consensus 446 dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~ 522 (587)
T 1gpe_A 446 DPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAGET---LPGYNLVQNATLSQWSDYVLQNFRPNWHAV 522 (587)
T ss_dssp CGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEEE---ESGGGSCTTCCHHHHHHHHHHSCEECSCCB
T ss_pred CcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhccccc---CCCccccCCCCHHHHHHHHHHhcCcccCcc
Confidence 999999 9999999999999999999999999999988888764433 233211223789999999999988899999
Q ss_pred ccccccCCCCCCcccCCCCceeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhhcC
Q psy14407 457 GTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYN 519 (522)
Q Consensus 457 Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~~~ 519 (522)
||||||++++ +||||++|||||++||||+|+||||+++++||++|+||||+|+||+|+++++
T Consensus 523 GTcrMG~~~~-~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 523 SSCSMMSREL-GGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp CTTCBSCGGG-TCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCCCC-CceECCCCEEECCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhh
Confidence 9999998864 4999999999999999999999999999999999999999999999998864
No 5
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=6.1e-79 Score=651.88 Aligned_cols=459 Identities=27% Similarity=0.410 Sum_probs=378.2
Q ss_pred CCcccceeecccccCcccCCCCceeeeecCcccchhhHhhcceeecCChhhHHHHHH-hCCCCCCchhhHHHHHHhccCC
Q psy14407 7 LSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGYDETLKYFVKSEDYR 85 (522)
Q Consensus 7 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~-~g~~~w~~~~l~pyy~~~e~~~ 85 (522)
++.++|.|.++||+ + .++.+.+.+|++|||||++|+|+|+|+.+.||+.|++ +|+.+|+|++|+|||+|+|+++
T Consensus 66 ~~~~~w~~~~~p~~----~-~~~~~~~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~ 140 (546)
T 2jbv_A 66 ESGYDWDYPIEPQE----N-GNSFMRHARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNE 140 (546)
T ss_dssp TSTTBCCEEBCCCS----S-SCTTCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEET
T ss_pred CCcccccccccccC----C-CCceEEeecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhcc
Confidence 56789999999998 4 6788999999999999999999999999999999998 7999999999999999999998
Q ss_pred CCCCCCCCCCcCCCCcEeeecCCCCCCchHHHHHHHHHHHcCCCCCCCCCCCCc-ccceeeeccccc-CCeecchhhhhc
Q psy14407 86 SVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDRYV-DVGFAELPGMTR-YGLRFSAADAYL 163 (522)
Q Consensus 86 ~~~~~~~~~~~g~~gp~~v~~~~~~~~~~~~~~~~~a~~~~G~~~~~~~n~~~~-~~G~~~~~~~~~-~g~R~s~~~~~l 163 (522)
+.. + +..+||..||++++.+++. .+..+.|.++++++|++.. ++|.... +.|++.|+.+|. +|.|+|+..+||
T Consensus 141 ~~~-~-~~~~~g~~Gpl~v~~~~~~--~~~~~~~~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l 215 (546)
T 2jbv_A 141 DAG-P-DAPHHGDSGPVHLMNVPPK--DPTGVALLDACEQAGIPRA-KFNTGTTVVNGANFFQINRRADGTRSSSSVSYI 215 (546)
T ss_dssp TCB-T-TBTTSCBSCSEEEEECCSC--CHHHHHHHHHHHHTTCCBC-CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHT
T ss_pred CCC-C-ccccCCCCCCEEEecCCCC--CHHHHHHHHHHHHCCCCcc-CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHH
Confidence 631 1 1467889999999877666 7899999999999999988 7776431 578999998888 999999999999
Q ss_pred ccccCCCCCeEEEcCcEEEEEEecCC-CeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHHhCCCChhhhhhCC
Q psy14407 164 TPIAGKRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVK 241 (522)
Q Consensus 164 ~~~~~~~~n~~v~~~~~V~~I~~~~~-~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig~~~~l~~~g 241 (522)
.++. .++|++|++++.|++|+++ + ++++||++.+. +|+.++++|+|+||||||+|+||+||++|||||+++|+++|
T Consensus 216 ~~a~-~~~~~~i~~~~~V~~i~~~-~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~g 293 (546)
T 2jbv_A 216 HPIV-EQENFTLLTGLRARQLVFD-ADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHG 293 (546)
T ss_dssp GGGT-TCTTEEEECSCEEEEEEEC-TTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTT
T ss_pred HHHh-cCCCcEEEeCCEEEEEEEC-CCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcC
Confidence 9887 7899999999999999998 5 78999999872 28889999977999999999999999999999999999999
Q ss_pred CCceeecc-ccccccccccccccEEEecCCCccccchHHHHHHHHhcCCCCccccccccEEEEEeCCCCCCCCchhhhhh
Q psy14407 242 IPVKQDLR-VGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQNTARPDLEIHLL 320 (522)
Q Consensus 242 i~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~ 320 (522)
|+++.++| ||+||+||+.+. +.+.++.+. ... . . .......|++.......|++++++.
T Consensus 294 i~~~~dlP~VG~nL~dH~~~~-~~~~~~~~~-~~~-------------~----~-~~~~~~~f~~~~~~~~~p~~~~~~~ 353 (546)
T 2jbv_A 294 IEVLVDSPGVGEHLQDHPEGV-VQFEAKQPM-VAE-------------S----T-QWWEIGIFTPTEDGLDRPDLMMHYG 353 (546)
T ss_dssp CCCSEECTTTTCSBBCCEECC-EEEEESSCC-CSC-------------C----S-SSCCEEEEECSSTTCSSCSEEEEEE
T ss_pred CceEeeCcchhhhhhhCccce-EEEEecCCC-ccc-------------c----c-chhheEEEEecCCCCCCCceEEEec
Confidence 99999999 999999999985 777776541 100 0 0 1123556766543335677766544
Q ss_pred hcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEeecccCcceEEEecCCCCCCCceeecCCCCChH--HHHH
Q psy14407 321 YFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSLVNPKSCGKVTLKSADPLAPPCIDTGILSEPE--DLAT 398 (522)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~--D~~~ 398 (522)
+.... . .+ ...+. . .....+++...+++|.|||+|+|+++||++.|.|+++|+.++. |++.
T Consensus 354 ~~~~~--~---~~-~~~g~----------~-~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~ 416 (546)
T 2jbv_A 354 SVPFD--M---NT-LRHGY----------P-TTENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRV 416 (546)
T ss_dssp SSCCC--T---TT-GGGTC----------C-CCSSEEEEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHH
T ss_pred ccccc--c---cc-cccCc----------c-CCCCeEEEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHH
Confidence 32210 0 00 00000 0 1234566777789999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhhCCCCCcccccccccCCCCCCcccCCCCcee
Q psy14407 399 LIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVK 478 (522)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~~~~~VVD~~~rv~ 478 (522)
+.++++.+++++++.+++.+...+. .|+ ....+++++++|++....+++|++||||||++.++++|||++||||
T Consensus 417 ~~~~~~~~~~i~~~~~~~~~~~~~~---~p~---~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~ 490 (546)
T 2jbv_A 417 MVAGIRKAREIAAQPAMAEWTGREL---SPG---VEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVK 490 (546)
T ss_dssp HHHHHHHHHHHHTSGGGTTTEEEEE---ESC---TTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBT
T ss_pred HHHHHHHHHHHHcCcchhhcccccc---cCC---CCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEE
Confidence 9999999999999988877654333 133 2457999999999999889999999999996333569999999999
Q ss_pred CcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhhcCC
Q psy14407 479 GIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYNI 520 (522)
Q Consensus 479 g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~~~~ 520 (522)
|++||||||+||||+++++||++|+||||+|+||+|++++++
T Consensus 491 Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~ 532 (546)
T 2jbv_A 491 GVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSARAG 532 (546)
T ss_dssp TSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC------
T ss_pred CCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999998765
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=5.3e-77 Score=637.64 Aligned_cols=454 Identities=25% Similarity=0.338 Sum_probs=371.2
Q ss_pred cCCCCCcccceeecccccCcccCCCCceeeeecCcccchhhHhhcceeecCChhhHHHHHHh-CCCCCCchhhHHHHHHh
Q psy14407 3 SVLSLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGYDETLKYFVKS 81 (522)
Q Consensus 3 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~-g~~~w~~~~l~pyy~~~ 81 (522)
..++++.+||.|.++||+ ++.++.+.+++||+|||||+||+|+|+|+++.||+.|.+. ++++|+|++++|||+++
T Consensus 65 ~~~~~~~~dw~~~t~p~~----~~~~~~~~~~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~ 140 (526)
T 3t37_A 65 PALQGRSYDWDYRTEAQA----GTAGRAHHWARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAI 140 (526)
T ss_dssp GGTTTSTTBCCEECCCBG----GGTTBCCEECCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHH
T ss_pred hhccCCccccCccccccC----CCCCCeEeccCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhh
Confidence 356788999999999999 5689999999999999999999999999999999999874 89999999999999999
Q ss_pred ccCCCCCCCCCCCCcCCCCcEeeecCCCCCCchHHHHHHHHHHHcCCCCCCCCCCCCcccceeeecccccCCeecchhhh
Q psy14407 82 EDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADA 161 (522)
Q Consensus 82 e~~~~~~~~~~~~~~g~~gp~~v~~~~~~~~~~~~~~~~~a~~~~G~~~~~~~n~~~~~~G~~~~~~~~~~g~R~s~~~~ 161 (522)
|++.... ...++..||+.+...... ..|+.+.|.++++++|++...+++... +.++..|..++..|.|.|+..+
T Consensus 141 E~~~~~~----~~~~~~~g~~~~~~~~~~-~~p~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~g~r~s~~~~ 214 (526)
T 3t37_A 141 EDHPLGG----DGIHGKGGPLPIHLPADE-VSPLARAFIEAGASLGLPRLEGHNSGE-MIGVTPNSLNIRDGRRVTAADA 214 (526)
T ss_dssp EECTTTT----SSSSCSSCSEECBCCSTT-SCHHHHHHHHHHHHTTCCBCSSSCSSC-CBSBCCCCBCEETTEECCHHHH
T ss_pred hhccCCC----ccccCcCCCcCccccccc-CCHHHHHHHHHHHHcCCCcccCCCCCc-ccccccccccccCCcccccccc
Confidence 9987654 566888899888754322 268999999999999999888888877 7888888888889999999999
Q ss_pred hcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCCChhhhhhCC
Q psy14407 162 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVK 241 (522)
Q Consensus 162 ~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig~~~~l~~~g 241 (522)
|+.++...++|++|++++.|+||+++ +++|+||++.+ .+...++.| |+||||||||+||+|||+||||++++|+++|
T Consensus 215 ~~~~~~~~r~nl~v~~~~~v~~i~~~-~~~a~gv~~~~-~~~~~~~~a-~~VILsAGai~SP~LLl~SGig~~~~l~~~g 291 (526)
T 3t37_A 215 WLTKAVRGRKNLTILTGSRVRRLKLE-GNQVRSLEVVG-RQGSAEVFA-DQIVLCAGALESPALLMRSGIGPHDVLDAAG 291 (526)
T ss_dssp HSCHHHHTCTTEEEECSCEEEEEEEE-TTEEEEEEEEE-TTEEEEEEE-EEEEECSHHHHHHHHHHHTTEECHHHHHHHT
T ss_pred cccccccCCCCeEEEeCCEEEEEEec-CCeEEEEEEEe-cCceEEEee-cceEEcccccCCcchhhhccCCchhhhhccC
Confidence 99775437999999999999999998 88999999998 777788999 6999999999999999999999999999999
Q ss_pred CCceeecc-ccccccccccccccEEEecCCCccccchHHHHHHHHhcCCCCccccccccEEEEEeCCCC--CCCCchhhh
Q psy14407 242 IPVKQDLR-VGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQN--TARPDLEIH 318 (522)
Q Consensus 242 i~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~--~~~p~~~~~ 318 (522)
|+++.++| ||+||+||+......+..+++. +...........+...... ...|++++.
T Consensus 292 i~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (526)
T 3t37_A 292 VGCLIDMPDIGRNLQDHLLGAGNLYAARKPV-------------------PPSRLQHSESMAYMRADSFTAAGQPEIVVG 352 (526)
T ss_dssp CCCSEECTTTTCSBBCCEEEEEEEEEESSCC-------------------CCCSSCSEEEEEEECSSCSSCCSSCCEEEE
T ss_pred CCeEecCCccccccccccccceeEEeccCCc-------------------chHhhcchhhhhhhhcccccccCCcceeee
Confidence 99999999 9999999987631223333321 1100001123334333221 133443322
Q ss_pred hhhcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEeecccCcceEEEecCCCCCCCceeecCCCCChHHHHH
Q psy14407 319 LLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSLVNPKSCGKVTLKSADPLAPPCIDTGILSEPEDLAT 398 (522)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~ 398 (522)
...... ... . +........+++...+.+|.|||+|++.+.||++.|.|+++|+.++.|++.
T Consensus 353 ~~~~~~-~~~-------~-----------~~~~~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~ 413 (526)
T 3t37_A 353 CGVAPI-VSE-------S-----------FPAPAAGSAYSLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRER 413 (526)
T ss_dssp EESSCC-CCT-------T-----------SCCCCTTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHH
T ss_pred cccccc-ccc-------c-----------cccccCCcceeeeccccCccccCcceeccCCCccCceeccccCCCHHHHHH
Confidence 211110 000 0 011222356677777899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhhCCCCCcccccccccCCCCCCcccCCCCcee
Q psy14407 399 LIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVK 478 (522)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~~~~~VVD~~~rv~ 478 (522)
+.++++.+++++.+..++.+...+. .|++ ..+++++++|++....+.+|++||||||+|+ +||||++||||
T Consensus 414 ~~~~~~~~r~i~~~~~~~~~~~~~~---~pg~----~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~--~sVVD~~~rV~ 484 (526)
T 3t37_A 414 FRRALEASRTIGHRDELAGWREREL---LPGT----PNSAAEMDDFIARSVITHHHPCGTCRMGKDP--DAVVDANLRLK 484 (526)
T ss_dssp HHHHHHHHHHHHTCGGGTTTEEEEC---SSCC----CCSHHHHHHHHHHHEEECSCCBCTTCBCSST--TCSBCTTCBBT
T ss_pred HHHHHHHHHHHHcChhhhhcccccc---CCCC----CCCHHHHHHHHHhcCccCcccCccccCCCCC--CccCCCCCEEc
Confidence 9999999999999888887765544 2442 2688999999999999999999999999875 49999999999
Q ss_pred CcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhh
Q psy14407 479 GIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKT 516 (522)
Q Consensus 479 g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~ 516 (522)
|++|||||||||||+++++||++||||||||+||+-..
T Consensus 485 Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~~ 522 (526)
T 3t37_A 485 ALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYHH 522 (526)
T ss_dssp TCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999998643
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=6.1e-65 Score=542.50 Aligned_cols=423 Identities=23% Similarity=0.294 Sum_probs=311.8
Q ss_pred cceeecccccCcccCCCCceeeeecCcccchhhHhhcceeecCChhhHHHHHHhCCCCCCchhhHHHHHHhccCCCCCCC
Q psy14407 11 DHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKYFVKSEDYRSVIYN 90 (522)
Q Consensus 11 ~w~~~~~~~~~~~~~~~~~~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~g~~~w~~~~l~pyy~~~e~~~~~~~~ 90 (522)
+| |.+.||+. ..++.+.+.+|++|||||+||+|+|.|+.+.||+.+ | ++|+|++++|||+++|+.+...
T Consensus 80 ~~-~~t~~q~~----~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~~-- 148 (536)
T 1ju2_A 80 DD-GKTPVERF----VSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVYK-- 148 (536)
T ss_dssp CC-SSSSEEEE----ECTTSCEEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCBC--
T ss_pred Cc-CcCCCccc----cCCCcceeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCCC--
Confidence 45 77888873 467788999999999999999999999999999732 2 3599999999999999875321
Q ss_pred CCCCCcCCCCcEeeecCCCCCCchHHHHHHHHHHHcCCCCCCCCCCCCcccce--eeecccccCCeecchhhhhcccccC
Q psy14407 91 ESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGF--AELPGMTRYGLRFSAADAYLTPIAG 168 (522)
Q Consensus 91 ~~~~~~g~~gp~~v~~~~~~~~~~~~~~~~~a~~~~G~~~~~~~n~~~~~~G~--~~~~~~~~~g~R~s~~~~~l~~~~~ 168 (522)
+.. .+....|.++++++|++....++... ..|+ +.+.+ +.+|.|+++.. |+.. +
T Consensus 149 -----------------~~~--~~~~~~~~~a~~~~G~~~~~~~~~~~-~~g~~~g~~~~-~~~g~r~s~~~-~~~~-~- 204 (536)
T 1ju2_A 149 -----------------PNS--QSWQSVTKTAFLEAGVHPNHGFSLDH-EEGTRITGSTF-DNKGTRHAADE-LLNK-G- 204 (536)
T ss_dssp -----------------CCC--CHHHHHHHHHHHHTTCCCEEEECCBC-CSEEEECEESB-CTTSBBCCGGG-GGGG-S-
T ss_pred -----------------CCC--CcHHHHHHHHHHHcCCCCCCCcccCC-CCCceeeeEEE-CCCCeEecHHH-hhhh-h-
Confidence 112 57788999999999985321111111 1221 11211 25789999876 7755 4
Q ss_pred CCCCeEEEcCcEEEEEEecCC--CeEEEEEEEecCCeEEEEE--eCcEEEEcCcchhhhHHHHHhCCCChhhhhhCCCCc
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQ--NVATGVEYVNSKGETVRVT--ANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPV 244 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~--~~a~gV~~~~~~g~~~~v~--A~k~VILaaGai~Tp~LLl~SGig~~~~l~~~gi~~ 244 (522)
.++|++|+++++|+||+++++ ++++||++.+.+|+.++++ ++|+||||||+|+||+||++||||++++|+++||++
T Consensus 205 ~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~ 284 (536)
T 1ju2_A 205 NSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPV 284 (536)
T ss_dssp CTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCC
T ss_pred cCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCce
Confidence 689999999999999999832 4899999987567776664 558999999999999999999999999999999999
Q ss_pred eeecc-ccccccccccccccEEEecCCCccccchHHHHHHHHhcCCCCccccccccEEEEEeCCCCCCCCchhhhhhhcc
Q psy14407 245 KQDLR-VGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQNTARPDLEIHLLYFQ 323 (522)
Q Consensus 245 ~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 323 (522)
+.|+| ||+||+||+... +.+.++.+....... ..+.... ......+++.. ..+.+. +.+..
T Consensus 285 ~~dlP~VG~NL~DH~~~~-~~~~~~~~~~~~~~~----------~~~~~~~-~~~~~~g~~~~----~~~~~~--~~~~~ 346 (536)
T 1ju2_A 285 VLSHPYVGQFLHDNPRNF-INILPPNPIEPTIVT----------VLGISND-FYQCSFSSLPF----TTPPFG--FFPSS 346 (536)
T ss_dssp SEECTTTTEEEECCEEEE-EEECCSSCCCCCCCC----------EEEECSS-EEEEEEEECCC----SSCCBT--TBSSS
T ss_pred EecCcccccchhcCccee-EEEEeCCCcccccch----------hhhHHHH-HHHcCCCCCCC----Chhhhe--eecCc
Confidence 99999 999999999874 666655431100000 0000000 00000011100 001000 00000
Q ss_pred cccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEeecccCcceEEEe-cCCCCCCCceeecCCCCChHHHHHHHHH
Q psy14407 324 QNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSLVNPKSCGKVTL-KSADPLAPPCIDTGILSEPEDLATLIRG 402 (522)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~~~d~~~~p~i~~~~~~~~~D~~~~~~~ 402 (522)
. ..+.......+...+++|.|||+|+| .++||++.|.|+++|+.++.|++.+.++
T Consensus 347 ~------------------------~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~ 402 (536)
T 1ju2_A 347 S------------------------YPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSG 402 (536)
T ss_dssp C------------------------CCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHH
T ss_pred c------------------------cCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHH
Confidence 0 01111122234455678999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhcChhHHhhcccccccCCccCCC------CCCCCHHHHHHHHHhhCCCCCcccccccccCCCCCCcccCCCCc
Q psy14407 403 TDYITRLEQTEAIRLAGGTLMSLNLEACSQ------YPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLK 476 (522)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~~~~~VVD~~~r 476 (522)
++.+++++++.+++.+...+. .+.|++.. ....+++++++|+|....+.+|++|||||| +|||++||
T Consensus 403 ~~~~~~i~~~~~~~~~~~~~~-~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG------~VVD~~lr 475 (536)
T 1ju2_A 403 MKKIGELLSTDALKPYKVEDL-PGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVG------KVLDGDFR 475 (536)
T ss_dssp HHHHHHHHTSGGGGGGCSSCC-STTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBT------TTBCTTSB
T ss_pred HHHHHHHHcCccchhhhcccc-ccCCCccccccCCCcccCCHHHHHHHHHhccCccccCcCccCCc------cEECCCCe
Confidence 999999999988887754432 12232210 124689999999999999999999999999 79999999
Q ss_pred eeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhh
Q psy14407 477 VKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTS 517 (522)
Q Consensus 477 v~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~ 517 (522)
|||++||||||+||||+.+++||++|+||||||+|+.|+++
T Consensus 476 V~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~ 516 (536)
T 1ju2_A 476 VTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQE 516 (536)
T ss_dssp BTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988877643
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=5.3e-63 Score=530.70 Aligned_cols=433 Identities=19% Similarity=0.211 Sum_probs=325.5
Q ss_pred eeeeecCcccchhhHhhcceeecCChhhHHH---HHHhCCCCCCchhhHHHHHHhccCCCCCCCCCCCCcCCCCcEeeec
Q psy14407 30 RIKITAGKGLGGSSAVQNILYQRGTSYDYEN---FAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGL 106 (522)
Q Consensus 30 ~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~---w~~~g~~~w~~~~l~pyy~~~e~~~~~~~~~~~~~~g~~gp~~v~~ 106 (522)
.+.+.+|++|||||++|+|+++|+.+.||+. |+ .+|+|++ |||+|+|+..+.. ..+...|+
T Consensus 84 ~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~----~~w~~~~--p~~~k~e~~~~~~-----~~~~~~g~----- 147 (546)
T 1kdg_A 84 DITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWP----SSWTNHA--PYTSKLSSRLPST-----DHPSTDGQ----- 147 (546)
T ss_dssp TBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCC----GGGSCCH--HHHHHHHHHSCCB-----SCCSTTSC-----
T ss_pred ccccccceeecccccccceEEecCChHHhcCcccCc----cccCccc--HHHHHHHhcCCCC-----ccCCCCCC-----
Confidence 3567899999999999999999999999987 83 5788888 9999999865321 12222332
Q ss_pred CCCCCCchHHHHHHHHHHHcCCCCCC---CCCCCCcccceeeecccccCCeecchhhhhcccccCCCCCeEEEcCcEEEE
Q psy14407 107 FKNKENNIIREIFETSAQELGYPCPK---DMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTK 183 (522)
Q Consensus 107 ~~~~~~~~~~~~~~~a~~~~G~~~~~---~~n~~~~~~G~~~~~~~~~~g~R~s~~~~~l~~~~~~~~n~~v~~~~~V~~ 183 (522)
.+. .+....|.++++++|++... +++. . ..|++.+++.+.+|.|+|+..+||.++. +++|++|+++++|++
T Consensus 148 -~~~--~~~~~~~~~a~~~~G~~~~~~~~~~~~-~-~~g~~~~~~~~~~g~R~s~~~~~l~~~~-~~~~~~i~~~~~V~~ 221 (546)
T 1kdg_A 148 -RYL--EQSFNVVSQLLKGQGYNQATINDNPNY-K-DHVFGYSAFDFLNGKRAGPVATYLQTAL-ARPNFTFKTNVMVSN 221 (546)
T ss_dssp -CCS--CHHHHHHHHHHHTTTCEECCGGGSTTC-C-TTEEEECCBCEETTEECHHHHTHHHHHH-TCTTEEEECSCCEEE
T ss_pred -ccC--CHHHHHHHHHHHHCCCCcCCccCCcCC-C-CcEEeeeeeccCCCcccCHHHHHHHHHh-hCCCcEEEeCCEEEE
Confidence 233 56778899999999986542 2222 3 5688888888889999999999999887 789999999999999
Q ss_pred EEecCCCeEEEEEEEec-CCe--EEEEEeCcEEEEcCcchhhhHHHHHhCCCChhhhhhC------CCCce-----eecc
Q psy14407 184 VIINDQNVATGVEYVNS-KGE--TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEV------KIPVK-----QDLR 249 (522)
Q Consensus 184 I~~~~~~~a~gV~~~~~-~g~--~~~v~A~k~VILaaGai~Tp~LLl~SGig~~~~l~~~------gi~~~-----~~~p 249 (522)
|+++ +++++||++.+. +|+ ++++.+.|+||||||+++||+||++||||++++|+++ ||+++ .|+|
T Consensus 222 i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp 300 (546)
T 1kdg_A 222 VVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP 300 (546)
T ss_dssp EEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC
T ss_pred EEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC
Confidence 9998 779999999864 465 3456555899999999999999999999999999999 58874 7888
Q ss_pred ccccccccccccccEEEecCC-Cc-c-----ccchHHHHHHHHhcCCCCccccccccEEEEEeCCCCCCC--Cchhhhhh
Q psy14407 250 VGENLKLNAQFTGPVMAFSAP-LK-R-----TVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQNTAR--PDLEIHLL 320 (522)
Q Consensus 250 VG~~l~dh~~~~~~~~~~~~~-~~-~-----~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~--p~~~~~~~ 320 (522)
||+||+||+.+. +.+..+.. .. . .........+|...+.|++..... .. .|+........ +.++..+.
T Consensus 301 VG~nL~DH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 377 (546)
T 1kdg_A 301 VGMNAQDNPSIN-LVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASP-KL-NFWRAYSGSDGFTRYAQGTVR 377 (546)
T ss_dssp TTTTBBCCCCEE-EEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCSC-CE-EEEEEEECTTSCEEEEEEEEE
T ss_pred cccCcccCccee-EEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCCc-ce-EEEEccCCCCcchhhhhheec
Confidence 999999999884 66663221 10 0 011223456777777888765321 22 34432111011 12221111
Q ss_pred hcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEeeccc-CcceEEEecCCCCCCCceeecCCCCChHHHHHH
Q psy14407 321 YFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSLVNP-KSCGKVTLKSADPLAPPCIDTGILSEPEDLATL 399 (522)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~ 399 (522)
+... . ..+. ........+++....++| .|||+|+|+++| ..|.++++|+.++.|++.+
T Consensus 378 ~~~~-~---------~~~~---------~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~ 436 (546)
T 1kdg_A 378 PGAA-S---------VNSS---------LPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVL 436 (546)
T ss_dssp ESCS-C---------CCCS---------SCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHH
T ss_pred cccc-c---------cccc---------cccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHH
Confidence 1100 0 0000 011112456676777888 999999999887 5577888999999999999
Q ss_pred HHHHHHHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhhCCCCCcccccccccCCCCCCcccCCCCceeC
Q psy14407 400 IRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKG 479 (522)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~~~~~VVD~~~rv~g 479 (522)
.++++.+++++++.+. . .. ..|+. ..++++++++++....+++|++||||||++++ ++|||++|||||
T Consensus 437 ~~~~~~~~~~~~~~~~----~-~~--~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~-~~VVD~~lrV~G 504 (546)
T 1kdg_A 437 LQALHDVVSNIGSIPG----L-TM--ITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQ-SAVVDSNVKVFG 504 (546)
T ss_dssp HHHHHHHTTTGGGSTT----C-EE--EESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTT-TCSBCTTCBBTT
T ss_pred HHHHHHHHHHhcCCCc----c-cc--cCCCC----CCCHHHHHHHHHHhcCcccccccceecCCCCC-CeeECCCCeEcc
Confidence 9999999999876421 1 11 12321 25788898998888888999999999998854 599999999999
Q ss_pred cCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhhcCCC
Q psy14407 480 IKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYNIP 521 (522)
Q Consensus 480 ~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~~~~~ 521 (522)
++||||||+||||+.+++||++|+||||+|+||+|++++++|
T Consensus 505 v~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~~ 546 (546)
T 1kdg_A 505 TNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGGP 546 (546)
T ss_dssp CSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999999999999999987
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=9.4e-62 Score=515.07 Aligned_cols=405 Identities=14% Similarity=0.130 Sum_probs=296.2
Q ss_pred Ccccceeeccccc--------------CcccC----CCCceeeeecCcccchhhHhhcceeecCChhhHHHHHHhCCCCC
Q psy14407 8 SEFDHAYLAEPSQ--------------FAGLG----VRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGW 69 (522)
Q Consensus 8 ~~~~w~~~~~~~~--------------~~~~~----~~~~~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~g~~~w 69 (522)
..++|.|.++||. ....+ ..++.+.+.+|++|||||+||+|+|+|+.+.||+.|. ++|
T Consensus 58 ~~~~w~~~t~p~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w 133 (504)
T 1n4w_A 58 KRSSWFKNRTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRV 133 (504)
T ss_dssp GGGSBSCSBCCCCTTCHHHHGGGCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTS
T ss_pred ccccccccccccccccccccccccccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----ccc
Confidence 3579999999882 11111 1677899999999999999999999999999999996 579
Q ss_pred CchhhH-HHHHHhccCCCCCCCCCCCCcCCCCcEeeecCCCCCCchHHHHHHHHHHHcCC-----CCCCCCCCC------
Q psy14407 70 GYDETL-KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGY-----PCPKDMNDR------ 137 (522)
Q Consensus 70 ~~~~l~-pyy~~~e~~~~~~~~~~~~~~g~~gp~~v~~~~~~~~~~~~~~~~~a~~~~G~-----~~~~~~n~~------ 137 (522)
.|++|+ |||+|+|+++++++.. ...| +..+ . .|....|.++++++|+ |...++|..
T Consensus 134 ~~~~l~~pyy~~~E~~~~~~~~~-~~~~--------~~~~-~--~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g 201 (504)
T 1n4w_A 134 DSSEMYDRYFPRANSMLRVNHID-TKWF--------EDTE-W--YKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAG 201 (504)
T ss_dssp CHHHHHHTHHHHHHHHHTCBCCC-HHHH--------HHCG-G--GHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTT
T ss_pred chhhhhhHHHHHHHHHhCCCCCC-cccc--------cCCC-c--chHHHHHHHHHHHcCCCCccCCcccccCccccccCc
Confidence 999999 9999999988765321 0111 0111 2 4788899999999999 555455421
Q ss_pred --CcccceeeecccccCCeecchhhhhcccccCCCCCeEEEcCcEEEEEEecC-CCeEEEEEEEecCC---eEEEEEeCc
Q psy14407 138 --YVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND-QNVATGVEYVNSKG---ETVRVTANK 211 (522)
Q Consensus 138 --~~~~G~~~~~~~~~~g~R~s~~~~~l~~~~~~~~n~~v~~~~~V~~I~~~~-~~~a~gV~~~~~~g---~~~~v~A~k 211 (522)
..+..|+.|..+|.+| |+++..+||.++. +++|++|+++++|+||++++ +++++||++.+.+| +.++++|+
T Consensus 202 ~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~-~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~- 278 (504)
T 1n4w_A 202 EVPKSALATEVIYGNNHG-KQSLDKTYLAAAL-GTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCR- 278 (504)
T ss_dssp SSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHH-HTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEE-
T ss_pred cccCCcccccccccCCCC-ccCHHHHHHHHHH-hcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeC-
Confidence 1156677788888999 9999999998887 78899999999999999983 45899999986556 67889995
Q ss_pred EEEEcCcchhhhHHHHHhC-CCChhhhhhCCCCceeecc-ccccccccccccccEEEecCCCccccchHHHHHHHHhcCC
Q psy14407 212 EVILTAGAIANAQLLLLSG-IGPKAHLDEVKIPVKQDLR-VGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRI 289 (522)
Q Consensus 212 ~VILaaGai~Tp~LLl~SG-ig~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (522)
+||||||+|+||+||++|| || ||+++ ++ ||+||+||+.+. +.+...... ..
T Consensus 279 ~VIlaaG~~~s~~lL~~Sg~ig--------~i~~~--~~~VG~nl~dh~~~~-~~~~~~~~~----------------~~ 331 (504)
T 1n4w_A 279 YLFLGAGSLGSTELLVRARDTG--------TLPNL--NSEVGAGWGPNGNIM-TARANHMWN----------------PT 331 (504)
T ss_dssp EEEECSHHHHHHHHHHHHHHTT--------SSTTC--CTTTTCCBBCTTCEE-EEEECCTTC----------------CC
T ss_pred EEEEccCCCCCHHHHHhccccC--------CCCCC--ChhhccccccCCcce-eeeccCCCC----------------cc
Confidence 9999999999999999999 87 46644 46 999999999763 433221110 12
Q ss_pred CCccccccccEEEEEeCCCCCCCCchhhhhhhcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEeecccCcc
Q psy14407 290 GPLSNAGLWSFTGYIDTLQNTARPDLEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSLVNPKSC 369 (522)
Q Consensus 290 g~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~ 369 (522)
+++.. ......+...... ..|+++..+. . .. .+ ...+.+...+.+|.++
T Consensus 332 ~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~---~---------------~~--------~~--~~~~~~~~~~~~p~sr 380 (504)
T 1n4w_A 332 GAHQS--SIPALGIDAWDNS-DSSVFAEIAP---M---------------PA--------GL--ETWVSLYLAITKNPQR 380 (504)
T ss_dssp CSCCC--SSCCEEEEECCSS-TTCEEEEEEC---C---------------CC--------SS--CCCEEEEEEEECCCCC
T ss_pred cCcCC--CccEEEEeccCCC-CCceEEEecc---C---------------Ch--------HH--HhhhhhheeeeccCCC
Confidence 33221 1122334333211 2333221110 0 00 01 0235555666789999
Q ss_pred eEEEecCCCCCCCceeecCCCCChHHHHHHHHHHH-HHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhh
Q psy14407 370 GKVTLKSADPLAPPCIDTGILSEPEDLATLIRGTD-YITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHL 448 (522)
Q Consensus 370 g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 448 (522)
|+|+|+++|| .|+++|+.++ | +.+.++++ .++++++..+. + |+... ... +++++ .
T Consensus 381 G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~-------~----~~~~~--~~~--~~~~~---~ 436 (504)
T 1n4w_A 381 GTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT-------I----YRYDL--FGT--QLKAF---A 436 (504)
T ss_dssp BCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC-------C----BCCSS--SSS--SCCSE---E
T ss_pred cEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC-------C----cCCch--hhh--hhhhh---c
Confidence 9999998764 6899999988 8 77888888 88888865432 1 11000 000 00000 3
Q ss_pred CCCCCcccccccccCCCCCCcccCCCCceeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhhcC
Q psy14407 449 TTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYN 519 (522)
Q Consensus 449 ~~~~~H~~Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~~~ 519 (522)
..+++|++|||||| +|||++|||||++||||||+||||+++++||++|+||||+|+||+|++++.
T Consensus 437 ~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 437 DDFCYHPLGGCVLG------KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp CSEESSCBCSSCTT------TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred cCccccccCCceee------eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 45689999999999 899999999999999999999999999999999999999999999998764
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.5e-60 Score=505.87 Aligned_cols=404 Identities=18% Similarity=0.145 Sum_probs=289.8
Q ss_pred CCcccceeecccccCc-----------ccCC------CCceeeeecCcccchhhHhhcceeecCChhhHHHHHHhCCCCC
Q psy14407 7 LSEFDHAYLAEPSQFA-----------GLGV------RNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGW 69 (522)
Q Consensus 7 ~~~~~w~~~~~~~~~~-----------~~~~------~~~~~~~~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~g~~~w 69 (522)
.+.++|.|.++||+.. .... .++.+.+.+|++|||||+||+|+|+|+.+.||+.|. ++|
T Consensus 63 ~~~~~w~~~~~pq~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w 138 (507)
T 1coy_A 63 DKRSMWLADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSV 138 (507)
T ss_dssp CTTSBBSCSBCCCSSCSBTTBSCCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTS
T ss_pred cccccccccccccccccccccccccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----Ccc
Confidence 3468999999998210 0123 678899999999999999999999999999999996 479
Q ss_pred CchhhH-HHHHHhccCCCCCCCCCCCCcCCCCcEeeecCCCCCCchHHHHHHHHHHHcCC-----CCCCCCCCCC-----
Q psy14407 70 GYDETL-KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGY-----PCPKDMNDRY----- 138 (522)
Q Consensus 70 ~~~~l~-pyy~~~e~~~~~~~~~~~~~~g~~gp~~v~~~~~~~~~~~~~~~~~a~~~~G~-----~~~~~~n~~~----- 138 (522)
.|++|+ |||+|+|+++++++.. .. ....... .|....|.++++++|+ |...++|...
T Consensus 139 ~~~~l~~pyy~~~E~~~~~~~~~--------~~--~~~~~~~--~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~ 206 (507)
T 1coy_A 139 DSNEMYNKYFPRANTGLGVNNID--------QA--WFESTEW--YKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAG 206 (507)
T ss_dssp CHHHHHHTHHHHHHHHHTCBCCC--------HH--HHHHCGG--GHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTT
T ss_pred chhcchhHHHHHHHHHhCCCCCC--------Cc--ccccccc--chHHHHHHHHHHHcCCCCccCCcccccCcccccCCC
Confidence 999999 9999999998765221 00 0000012 5788899999999999 6655554211
Q ss_pred ---cccceeeecccccCCeecchhhhhcccccCCCCCeEEEcCcEEEEEEecC-CCeEEEEEEEecCC---eEEEEEeCc
Q psy14407 139 ---VDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND-QNVATGVEYVNSKG---ETVRVTANK 211 (522)
Q Consensus 139 ---~~~G~~~~~~~~~~g~R~s~~~~~l~~~~~~~~n~~v~~~~~V~~I~~~~-~~~a~gV~~~~~~g---~~~~v~A~k 211 (522)
.+..|+.|..+|.+| |+|+..+||.++. +++|++|+++++|++|++++ +.+++||++.+.+| +.++++|+
T Consensus 207 ~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~-~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~- 283 (507)
T 1coy_A 207 QVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAA-ATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTAD- 283 (507)
T ss_dssp CSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHH-HTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEE-
T ss_pred cccCccccccccccCCCC-CcChHHHHHHHHH-hcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeC-
Confidence 155677888888999 9999999999887 78899999999999999983 34899999986455 47889995
Q ss_pred EEEEcCcchhhhHHHHHhC-CCChhhhhhCCCCceeecc-ccccccccccccccEEEecCCCccccchHHHHHHHHhcCC
Q psy14407 212 EVILTAGAIANAQLLLLSG-IGPKAHLDEVKIPVKQDLR-VGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRI 289 (522)
Q Consensus 212 ~VILaaGai~Tp~LLl~SG-ig~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (522)
+||||||+|+||+||++|| ||+ ++ ...+ ||+||++|+... ....... + ...
T Consensus 284 ~VIlaaGa~~sp~lL~~Sg~iG~--------lp--nl~d~VG~~l~~h~~~~-~~~~~~~--------------~--~~~ 336 (507)
T 1coy_A 284 RVFFAAGSVGTSKLLVSMKAQGH--------LP--NLSSQVGEGWGNNGNIM-VGRANHM--------------W--DAT 336 (507)
T ss_dssp EEEECSHHHHHHHHHHHHHHTTS--------ST--TSCTTTTCCBBCTTEEE-EEEECCT--------------T--SCC
T ss_pred EEEEccCccCCHHHHHhcccCCC--------CC--ccChhhCCccccCCccc-ccccccc--------------c--ccc
Confidence 9999999999999999999 883 22 1235 999999998752 2211100 0 123
Q ss_pred CCccccccccEEEEEeCCCCCCCCchhhhhhhcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEEEEeecccCcc
Q psy14407 290 GPLSNAGLWSFTGYIDTLQNTARPDLEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMSLVNPKSC 369 (522)
Q Consensus 290 g~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~ 369 (522)
+++.... ....+...... ..|++++.. + +.. .+ ...+.+.....+|.++
T Consensus 337 ~~~~~~~--~~~~~~~~~~~-~~~~~~~~~-~-----------------~~~--------~~--~~~~~~~~~~~~p~s~ 385 (507)
T 1coy_A 337 GSKQATI--PTMGIDNWADP-TAPIFAEIA-P-----------------LPA--------GL--ETYVSLYLAITKNPER 385 (507)
T ss_dssp CSCCCSS--CCEEEECTTCT-TSCEEEEEE-C-----------------CCC--------SS--CCCEEEEEEEECCCCC
T ss_pred cccCCCc--ceEEEeccCCC-CCCcEEEec-c-----------------CCH--------HH--hhheeeeEEEeeeCCC
Confidence 3332211 11112111111 223322111 0 000 00 1334445556789999
Q ss_pred eEEEecCCCCCCCceeecCCCCChHHHHHHHHHHH-HHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhh
Q psy14407 370 GKVTLKSADPLAPPCIDTGILSEPEDLATLIRGTD-YITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHL 448 (522)
Q Consensus 370 g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 448 (522)
|+|+|++++| .|+++|+.++ | +.+.++++ .++++++..+. +... +. ..+++ ++| .
T Consensus 386 G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~----~~-------~~~d~--~~~---~ 441 (507)
T 1coy_A 386 ARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYRT----DL-------FGVYY--KTW---G 441 (507)
T ss_dssp BCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCS----SC-------C--CC--CSS---B
T ss_pred cEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cccC----cc-------cccch--hhh---c
Confidence 9999998765 8999999999 8 45677777 88888875431 1110 10 01111 122 3
Q ss_pred CCCCCcccccccccCCCCCCcccCCCCceeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhh
Q psy14407 449 TTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTS 517 (522)
Q Consensus 449 ~~~~~H~~Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~ 517 (522)
..+++|++|||||| +|||++|||||++||||||+||||+++++||++||||||+|+||+|+++
T Consensus 442 ~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~ 504 (507)
T 1coy_A 442 DDFTYHPLGGVLLN------KATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISS 504 (507)
T ss_dssp CSEESCCBCSSCTT------TTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCcchh------heECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHH
Confidence 45689999999999 6999999999999999999999999999999999999999999999865
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=4.5e-44 Score=387.02 Aligned_cols=412 Identities=16% Similarity=0.137 Sum_probs=266.3
Q ss_pred ecCcccchhhHhhcceeecCChhhHHHHHHhCCCCC-CchhhHHHHHHhccCCCCCCCCCCCCcCCCCcEeeecCCCCCC
Q psy14407 34 TAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGW-GYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKEN 112 (522)
Q Consensus 34 ~~g~~vGGsS~~n~~~~~r~~~~df~~w~~~g~~~w-~~~~l~pyy~~~e~~~~~~~~~~~~~~g~~gp~~v~~~~~~~~ 112 (522)
..+..+||.+.+|.+...|..+.+ .+..+.+.++ .+++++++|.+.|..++..+.. +. .
T Consensus 156 ~~~~~vGG~~~~~~g~~~r~~~~e--~~~~l~~~~v~~~~~l~~~~~~~~~l~~vgg~~-----------------~~-~ 215 (623)
T 3pl8_A 156 AVTRVVGGMSTAWTCATPRFDREQ--RPLLVKDDADADDAEWDRLYTKAESYFQTGTDQ-----------------FK-E 215 (623)
T ss_dssp EECCSTTGGGGTCCCBCCCCCGGG--SCCSSTTCHHHHHHHHHHHHHHHHHHHTEESCT-----------------TT-T
T ss_pred cccccccCcceeeccccccCChHH--hhhhhcccCccChhhHHHHHHHHHHhccccccc-----------------cc-C
Confidence 367889999999999999998863 1111122333 5688999999999886543210 11 0
Q ss_pred chHHHHHHHHHHHcCCCCCCCCCCCCcccceeeecccccCCeecchhhhhcccc------cCCCCCeEEEcCcEEEEEEe
Q psy14407 113 NIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPI------AGKRTNLYVLKRSKVTKVII 186 (522)
Q Consensus 113 ~~~~~~~~~a~~~~G~~~~~~~n~~~~~~G~~~~~~~~~~g~R~s~~~~~l~~~------~~~~~n~~v~~~~~V~~I~~ 186 (522)
..........+...... ...+.. - ....... .....|+++..++|.++ . .++|++|++++.|++|++
T Consensus 216 ~~~~~~~~~~l~~~~~~-~~~~~~-~-p~a~~~~---~~~~~r~s~~~~~l~~~~~l~~~~-~~~nv~v~~~~~V~~i~~ 288 (623)
T 3pl8_A 216 SIRHNLVLNKLTEEYKG-QRDFQQ-I-PLAATRR---SPTFVEWSSANTVFDLQNRPNTDA-PEERFNLFPAVACERVVR 288 (623)
T ss_dssp CHHHHHHHHHHHHHTTT-TSCCEE-C-CEEEEEE---ETTEEEECCHHHHCCCCCEEETTE-EEEEEEEECSEEEEEEEE
T ss_pred ccccccchHHHHHhhhh-cccccc-c-chhhccC---CCCccccchHHhhhhhhhcchhhc-cCCCEEEEeCCEEEEEEE
Confidence 11111111122111111 000000 0 0000000 12346899899999877 5 678999999999999999
Q ss_pred c-CCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHHhCCCChhhhhhCCCCceeecc-cccccccccccccc
Q psy14407 187 N-DQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENLKLNAQFTGP 263 (522)
Q Consensus 187 ~-~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig~~~~l~~~gi~~~~~~p-VG~~l~dh~~~~~~ 263 (522)
+ ++++++||++.+. +|+.+++.| ++||||+|++.||+||++||||++.+|+.+||++ ++| ||+||+||+... +
T Consensus 289 ~~~~~~v~GV~~~~~~~g~~~~i~A-~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~~-~ 364 (623)
T 3pl8_A 289 NALNSEIESLHIHDLISGDRFEIKA-DVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLVF-C 364 (623)
T ss_dssp CTTSSCEEEEEEEETTTCCEEEECE-EEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEEE-E
T ss_pred ECCCCEEEEEEEEEcCCCcEEEEEC-CEEEEcCCCcCCHHHHHhcCCCccccccccCCCC--CCcccccchhhCcCce-E
Confidence 8 3459999999974 788899999 5999999999999999999999999999999999 999 999999999985 7
Q ss_pred EEEecCCCccc--------------cc-------------h---HHHHH-HHHhcCCCCccccccccEEEEEeCCCCCCC
Q psy14407 264 VMAFSAPLKRT--------------VY-------------S---QEMVF-KYLVNRIGPLSNAGLWSFTGYIDTLQNTAR 312 (522)
Q Consensus 264 ~~~~~~~~~~~--------------~~-------------~---~~~~~-~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~ 312 (522)
.+.+++...+. .+ . ...+. .|.....+++..+- .+...-.........
T Consensus 365 ~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 443 (623)
T 3pl8_A 365 QTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQHQEDPLPIPF-EDPEPQVTTLFQPSH 443 (623)
T ss_dssp EEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHHHCTTCCCSSCT-TCCCCEEECCCBTTB
T ss_pred EEEECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhhhhccccccccccc-ccccccccccccccC
Confidence 78776541000 00 0 00000 11111112211100 000000000000000
Q ss_pred Cc-hhhhhhhcccccchhhhhHhhhcccchHHHHHHhhcCCCCCeEEE-EEeecccCcceEEEecC--CCCCCCceeecC
Q psy14407 313 PD-LEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVI-SMSLVNPKSCGKVTLKS--ADPLAPPCIDTG 388 (522)
Q Consensus 313 p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~s~g~v~l~~--~d~~~~p~i~~~ 388 (522)
|- .|++ . ..+..+ .+.. .+...-.+.+ ...++.|.++|+|+|++ +|++++|.++++
T Consensus 444 ~~~~~~~--~---------~~~~~~-~~~~--------~~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~~~ 503 (623)
T 3pl8_A 444 PWHTQIH--R---------DAFSYG-AVQQ--------SIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFD 503 (623)
T ss_dssp CEEEEEE--C---------CSCCCS-CCCC--------SSCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEEEE
T ss_pred cchhhhh--h---------hhcccc-cccc--------ccccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEEEE
Confidence 00 0000 0 000000 0000 0000112222 24568899999999986 899999999999
Q ss_pred CCCChH-HHHHHHHHHHHHHHHhcChhHHhhcccccccCCccCCCCCCCCHHHHHHHHHhhCCCCCcccccccccCCCCC
Q psy14407 389 ILSEPE-DLATLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDP 467 (522)
Q Consensus 389 ~~~~~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~~~ 467 (522)
|..+++ |++.+.++++.++++++..+...... .+. + .....++|++||||||++.++
T Consensus 504 ~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~------~~~-----------~-----~~~~~~~H~~gt~~mg~~~~~ 561 (623)
T 3pl8_A 504 FRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGS------LPQ-----------F-----MEPGLVLHLGGTHRMGFDEKE 561 (623)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTS------CSE-----------E-----CCTTTTCCCBCTTCBCSSTTT
T ss_pred EeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCc------hhh-----------c-----cCCCCcccCCCceeCCCCCCC
Confidence 999999 99999999999999997643211100 000 0 012458999999999998335
Q ss_pred Cccc-CCCCceeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhhcC
Q psy14407 468 NAVV-TPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYN 519 (522)
Q Consensus 468 ~~VV-D~~~rv~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~~~ 519 (522)
+||| |++|||||++||||+|+|+||+++++||++||||||+|+||+|+++++
T Consensus 562 ~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~ 614 (623)
T 3pl8_A 562 DNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFT 614 (623)
T ss_dssp TTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred CeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhh
Confidence 6998 999999999999999999999999999999999999999999999885
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.77 E-value=0.00042 Score=72.81 Aligned_cols=59 Identities=20% Similarity=0.355 Sum_probs=49.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh-hhHHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA-NAQLLLL 228 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~-Tp~LLl~ 228 (522)
.+.|++|+++++|++|+.+++++|+||++.+ +|+.++++|+|.||||+|++. ++.+|..
T Consensus 213 ~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 213 EKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHTTCEEECSEEEEEEEECTTCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHcCCEEEecCEeEEEEECCCCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 4568999999999999987457899999988 788889999658999999998 5555543
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.62 E-value=0.015 Score=61.69 Aligned_cols=57 Identities=19% Similarity=0.288 Sum_probs=47.9
Q ss_pred CCCCeEEEcCcEEEEEEecCC-CeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~-~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
.+.+++|+.+++|++|+.+ + ++++||++.+.+|+.++++| +.||||+|++...+=|+
T Consensus 261 ~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~A-~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 261 KEQGIDTRLNSRVVKLVVN-DDHSVVGAVVHGKHTGYYMIGA-KSVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHTTCCEECSEEEEEEEEC-TTSBEEEEEEEETTTEEEEEEE-EEEEECCCCCTTCHHHH
T ss_pred HhcCCEEEeCCEEEEEEEC-CCCcEEEEEEEeCCCcEEEEEc-CEEEEecCCcccCHHHH
Confidence 4568999999999999988 5 78999999865788888999 68999999988654444
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=95.46 E-value=0.021 Score=60.67 Aligned_cols=61 Identities=21% Similarity=0.245 Sum_probs=48.3
Q ss_pred hcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 162 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 162 ~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
.|...+ .+.+++|+.+++|++|+.+++++++||++.+.+|+..+++|+ .||||+|.+..-+
T Consensus 260 ~L~~~~-~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~-~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 260 VLYDNA-VKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKAD-AVILATGGFAKNN 320 (571)
T ss_dssp HHHHHH-HHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCH
T ss_pred HHHHHH-HhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECC-eEEEeCCCcccCH
Confidence 343333 456899999999999998733789999988657888899995 6999999987543
No 15
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.43 E-value=0.021 Score=60.66 Aligned_cols=58 Identities=17% Similarity=0.210 Sum_probs=47.4
Q ss_pred CCCCeEEEcCcEEEEEEecCC-CeEEEEEEEecCCeEEEEEeCcEEEEcCcchhh-hHHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAGAIAN-AQLLLL 228 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~-~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~T-p~LLl~ 228 (522)
.+.+++|+++++|++|+.+ + ++++||++.+.+|+..+++| +.||||+|.+.. +.+|..
T Consensus 266 ~~~gv~i~~~t~v~~l~~~-~~g~v~GV~~~~~~G~~~~i~A-~~VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 266 VKRGTDIRLNSRVVRILED-ASGKVTGVLVKGEYTGYYVIKA-DAVVIAAGGFAKNNERVSK 325 (572)
T ss_dssp HHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEEC-SEEEECCCCCTTCHHHHHH
T ss_pred HHcCCeEEecCEEEEEEEC-CCCeEEEEEEEeCCCcEEEEEc-CEEEEeCCCCccCHHHHHH
Confidence 4568999999999999887 5 78999999865788889999 589999998874 555543
No 16
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=94.83 E-value=0.067 Score=56.57 Aligned_cols=61 Identities=23% Similarity=0.146 Sum_probs=51.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
...+++|+.+++|++|..+ ++++.+|++.+. +|+..+++| +.||+|+|+ .+..|+...|+.
T Consensus 181 ~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 181 VARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYA-KKVVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEE-EEEEECCGG-GHHHHHHTTTCC
T ss_pred HHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEEC-CEEEECCCc-chHHHHHhcCCC
Confidence 3678999999999999997 778999999875 677889999 579999997 578888776653
No 17
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.81 E-value=0.049 Score=58.28 Aligned_cols=52 Identities=15% Similarity=0.220 Sum_probs=45.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~T 222 (522)
.+.+++|+.++.|++|+.+ ++++.||.+.+. +|+.+.++| +.||||+|++..
T Consensus 166 ~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 218 (621)
T 2h88_A 166 LRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRA-KNTVIATGGYGR 218 (621)
T ss_dssp TTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred HhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEc-CeEEECCCcccc
Confidence 4689999999999999987 679999999863 788889999 589999999875
No 18
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=94.44 E-value=0.044 Score=58.32 Aligned_cols=53 Identities=15% Similarity=0.270 Sum_probs=44.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~T 222 (522)
.+.|++|+.++.|++|+.++++++.||.+.+. +|+.++++| +.||||+|++..
T Consensus 154 ~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGg~~~ 207 (588)
T 2wdq_A 154 LKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKA-RATVLATGGAGR 207 (588)
T ss_dssp HHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred HhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEc-CEEEECCCCCcc
Confidence 35699999999999999853568999998863 788888999 589999999765
No 19
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.43 E-value=0.074 Score=56.38 Aligned_cols=59 Identities=19% Similarity=0.242 Sum_probs=48.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHHhC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSG 230 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~SG 230 (522)
...+++|+.+++|++|..+ ++++.+|++.+. +|+..+++|+ .||+|+|+. +..|+...|
T Consensus 199 ~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~w-s~~l~~~~g 258 (571)
T 2rgh_A 199 AEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAK-LVINTSGPW-VDKVRNLNF 258 (571)
T ss_dssp HHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBS-CEEECCGGG-HHHHHTTCC
T ss_pred HHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcC-EEEECCChh-HHHHHHhhc
Confidence 4678999999999999987 678999999875 5777789994 799999975 777775444
No 20
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.29 E-value=0.079 Score=56.55 Aligned_cols=53 Identities=17% Similarity=0.360 Sum_probs=45.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANA 223 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp 223 (522)
+.+|++|+.++.|++|+.+ ++++.||.+.+. +|+.++++|+ .||||+|+....
T Consensus 146 ~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp TCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred hCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 4556999999999999987 678999988763 7888899995 799999998765
No 21
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=93.84 E-value=0.1 Score=56.14 Aligned_cols=52 Identities=13% Similarity=0.258 Sum_probs=44.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~T 222 (522)
.+.|++|+.++.|++|+.+ ++++.||.+.+. +|+.+.++| +.||||+|++..
T Consensus 169 ~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 221 (660)
T 2bs2_A 169 LKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVA-KGTLIATGGYGR 221 (660)
T ss_dssp HHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEC-SEEEECCCCCGG
T ss_pred HhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEc-CEEEEccCcchh
Confidence 3568999999999999887 678999998863 788889999 589999999875
No 22
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.79 E-value=0.12 Score=54.34 Aligned_cols=52 Identities=27% Similarity=0.390 Sum_probs=43.6
Q ss_pred CCCeEEEcCcEEEEEEecCCC------eEEEEEEEec-CCeEEEEEeCcEEEEcCcchhh
Q psy14407 170 RTNLYVLKRSKVTKVIINDQN------VATGVEYVNS-KGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~------~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~T 222 (522)
.+|++|+.++.|++|+.++++ ++.||.+.+. +|+.++++| +.||||+|++..
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~~ 209 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHA-KAVVLATGGASK 209 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEEC-SEEEECCCCCGG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEc-CeEEECCCCccc
Confidence 479999999999999984234 8999999863 788889999 589999998764
No 23
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.78 E-value=0.077 Score=52.24 Aligned_cols=58 Identities=12% Similarity=0.128 Sum_probs=43.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHh-CC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLS-GI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~S-Gi 231 (522)
.+.+++|+.+++|++|..+ ++.+..|+.. +|+..+++|+ .||+|+|+. |..|+... |+
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~--~g~~~~~~a~-~VV~A~G~~-s~~l~~~~~g~ 219 (369)
T 3dme_A 161 ESDGAQLVFHTPLIAGRVR-PEGGFELDFG--GAEPMTLSCR-VLINAAGLH-APGLARRIEGI 219 (369)
T ss_dssp HHTTCEEECSCCEEEEEEC-TTSSEEEEEC--TTSCEEEEEE-EEEECCGGG-HHHHHHTEETS
T ss_pred HHCCCEEECCCEEEEEEEc-CCceEEEEEC--CCceeEEEeC-EEEECCCcc-hHHHHHHhcCC
Confidence 4678999999999999987 3332335432 5766789994 799999974 88887665 54
No 24
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.77 E-value=0.051 Score=56.39 Aligned_cols=54 Identities=19% Similarity=0.180 Sum_probs=37.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLL 228 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~ 228 (522)
+..+.+|+++++|++|+.+ +++++||++.+ |+ ++.|+ .||.+|..-.|.+.|+-
T Consensus 232 ~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~--g~--~~~ad-~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 232 QDLGGEVVLNARVSHMETT-GNKIEAVHLED--GR--RFLTQ-AVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--SC--EEECS-CEEECCC----------
T ss_pred HHhCCceeeecceeEEEee-CCeEEEEEecC--Cc--EEEcC-EEEECCCHHHHHHHhcc
Confidence 4678999999999999998 88999998764 66 47885 69999999888877764
No 25
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=92.25 E-value=0.11 Score=55.95 Aligned_cols=50 Identities=18% Similarity=0.290 Sum_probs=43.0
Q ss_pred CeEEEcCcEEEEEEecCC--CeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhh
Q psy14407 172 NLYVLKRSKVTKVIINDQ--NVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~~--~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~T 222 (522)
|++|+.++.|++|+.+++ +++.||.+.+. +|+.+.++| |.||||+|.++.
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~A-k~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKA-NAMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEe-CEEEECCCcccc
Confidence 899999999999998833 49999998864 788889999 589999998873
No 26
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=91.98 E-value=0.21 Score=53.75 Aligned_cols=50 Identities=18% Similarity=0.227 Sum_probs=42.3
Q ss_pred Ce-EEEcCcEEEEEEecCC--CeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhh
Q psy14407 172 NL-YVLKRSKVTKVIINDQ--NVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 172 n~-~v~~~~~V~~I~~~~~--~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~T 222 (522)
|+ +|+.++.|++|+.+++ +++.||.+.+. +|+.++++| +.||||+|.+..
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKA-KAVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEc-CEEEECCCcccc
Confidence 89 9999999999998723 28999998753 788788999 589999999875
No 27
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=91.64 E-value=0.21 Score=52.10 Aligned_cols=57 Identities=25% Similarity=0.358 Sum_probs=46.1
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
.+|...+ ...+++|+.+++|++|..+ ++++.+|++.+.+|+..+++| +.||.|.|.-
T Consensus 115 ~~L~~~a-~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~a-d~VI~AdG~~ 171 (512)
T 3e1t_A 115 DMLLRNS-ERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHA-RFIVDASGNR 171 (512)
T ss_dssp HHHHHHH-HHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEE-EEEEECCCTT
T ss_pred HHHHHHH-HhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEc-CEEEECCCcc
Confidence 4444433 4578999999999999987 778999998876788789999 5899999974
No 28
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.07 E-value=0.11 Score=52.92 Aligned_cols=51 Identities=25% Similarity=0.372 Sum_probs=40.3
Q ss_pred CCCCeEEEcCc---EEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRS---KVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~---~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+.+++|+.++ +|++|..+ +++++||+.. +|+ +++|+ .||+|+|+. |+.|+
T Consensus 172 ~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~--~G~--~i~Ad-~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 172 QRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTA--DGK--IWRAE-RTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHTTCEEEESTTTTCEEEEEEE-TTEEEEEEET--TTE--EEECS-EEEECCGGG-GGGTS
T ss_pred HhcCCEEEeCCcCceEEEEEec-CCeEEEEEEC--CCC--EEECC-EEEECCCCC-hhhhc
Confidence 46689999999 99999987 6778888764 464 58895 799999985 55554
No 29
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=90.99 E-value=0.67 Score=44.01 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=39.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec----------CCeEEEEEeCcEEEEcCcc
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS----------KGETVRVTANKEVILTAGA 219 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~----------~g~~~~v~A~k~VILaaGa 219 (522)
+..+++++.+++|++|..+ ++++.+|++... +|+..+++| +.||+|+|+
T Consensus 131 ~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~a-d~VV~AtG~ 189 (284)
T 1rp0_A 131 ARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEA-KIVVSSCGH 189 (284)
T ss_dssp TSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEE-EEEEECCCS
T ss_pred hcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEEC-CEEEECCCC
Confidence 4579999999999999887 678889988631 144578999 579999996
No 30
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.58 E-value=0.23 Score=49.21 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=41.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSG 230 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SG 230 (522)
.+.+++|+.+++|++|..+ ++++.+|+.. +| +++|+ .||+|+|+. |+.|+...|
T Consensus 160 ~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~--~g---~i~a~-~VV~A~G~~-s~~l~~~~g 213 (382)
T 1y56_B 160 KEYGAKLLEYTEVKGFLIE-NNEIKGVKTN--KG---IIKTG-IVVNATNAW-ANLINAMAG 213 (382)
T ss_dssp HHTTCEEECSCCEEEEEES-SSBEEEEEET--TE---EEECS-EEEECCGGG-HHHHHHHHT
T ss_pred HHCCCEEECCceEEEEEEE-CCEEEEEEEC--Cc---EEECC-EEEECcchh-HHHHHHHcC
Confidence 4568999999999999987 6677777642 34 68995 799999974 666665544
No 31
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=90.18 E-value=0.44 Score=47.97 Aligned_cols=52 Identities=23% Similarity=0.219 Sum_probs=42.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
...+.+|++++.|++|..+ ++++++|+. +|+ +++|+ .||+|+++-.+.+||-
T Consensus 207 ~~~G~~i~~~~~V~~i~~~-~~~~~gv~~---~g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 207 SANGGKIHTGQEVSKILIE-NGKAAGIIA---DDR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHTTCEEECSCCEEEEEEE-TTEEEEEEE---TTE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHcCCEEEECCceeEEEEE-CCEEEEEEE---CCE--EEECC-EEEECCCHHHHHHhcC
Confidence 4568999999999999998 677888864 354 58895 7999999988888664
No 32
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=90.13 E-value=0.39 Score=49.05 Aligned_cols=51 Identities=18% Similarity=0.230 Sum_probs=42.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIA 221 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~ 221 (522)
...+++|+.+++|++|..+ ++++++|++.+. +|+..+++| +.||.|.|+-.
T Consensus 111 ~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~a-d~VV~AdG~~s 162 (453)
T 3atr_A 111 QDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYS-KVVVEATGYSR 162 (453)
T ss_dssp HHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEEC-SEEEECCGGGC
T ss_pred HHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEc-CEEEECcCCch
Confidence 3578999999999999887 678889998865 677788999 47999999743
No 33
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=89.69 E-value=0.25 Score=50.48 Aligned_cols=50 Identities=18% Similarity=0.266 Sum_probs=39.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
.+.+++|+++++|++|..+ ++++.+|++. +|+ +++|+ .||+|+|+...|.
T Consensus 145 ~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~--~G~--~i~Ad-~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 145 KDLGVKIRTNTPVETIEYE-NGQTKAVILQ--TGE--VLETN-HVVIAVGGKSVPQ 194 (447)
T ss_dssp HHTTCEEECSCCEEEEEEE-TTEEEEEEET--TCC--EEECS-CEEECCCCSSSGG
T ss_pred HHCCCEEEeCcEEEEEEec-CCcEEEEEEC--CCC--EEECC-EEEECCCCCcCCC
Confidence 4578999999999999887 6677787754 464 58895 7999999987663
No 34
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=89.50 E-value=0.71 Score=47.85 Aligned_cols=55 Identities=20% Similarity=0.108 Sum_probs=44.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
...+++|+.+++|++|..+ + ++.+|++.+. +|++.+++|+ .||+|+|+. +..|+.
T Consensus 160 ~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQAR-GLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEES-CEEECCGGG-HHHHHH
T ss_pred HHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECC-EEEECCChh-HHHHHH
Confidence 3568999999999999887 4 5788888763 6877889995 799999985 666664
No 35
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=89.09 E-value=0.33 Score=48.45 Aligned_cols=55 Identities=22% Similarity=0.379 Sum_probs=41.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
.+.+++++.+++|++|..+ ++++.+|+.. +| +++| +.||+|+|+ .++.|+...|+
T Consensus 185 ~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~--~g---~~~a-~~vV~a~G~-~s~~l~~~~g~ 239 (405)
T 2gag_B 185 NEMGVDIIQNCEVTGFIKD-GEKVTGVKTT--RG---TIHA-GKVALAGAG-HSSVLAEMAGF 239 (405)
T ss_dssp HHTTCEEECSCCEEEEEES-SSBEEEEEET--TC---CEEE-EEEEECCGG-GHHHHHHHHTC
T ss_pred HHCCCEEEcCCeEEEEEEe-CCEEEEEEeC--Cc---eEEC-CEEEECCch-hHHHHHHHcCC
Confidence 4578999999999999887 5667777643 45 5889 479999997 45566655543
No 36
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=88.73 E-value=0.41 Score=47.57 Aligned_cols=56 Identities=27% Similarity=0.268 Sum_probs=43.8
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
.+|...+ ...+++|+.+++|++|..+ ++++++|++.+ .+...+++| +.||.|.|+-
T Consensus 106 ~~L~~~~-~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~-~~~~~~~~a-~~vV~A~G~~ 161 (397)
T 3cgv_A 106 KHLAALA-AKAGADVWVKSPALGVIKE-NGKVAGAKIRH-NNEIVDVRA-KMVIAADGFE 161 (397)
T ss_dssp HHHHHHH-HHHTCEEESSCCEEEEEEE-TTEEEEEEEEE-TTEEEEEEE-EEEEECCCTT
T ss_pred HHHHHHH-HhCCCEEEECCEEEEEEEe-CCEEEEEEEEE-CCeEEEEEc-CEEEECCCcc
Confidence 3443333 3578999999999999988 77888999876 566778999 5799999964
No 37
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=88.63 E-value=1.3 Score=42.23 Aligned_cols=66 Identities=23% Similarity=0.296 Sum_probs=51.2
Q ss_pred hcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 162 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 162 ~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
++..+. +..++++++++.|++|..+ +++.+|++.+. +|+..++.++ .||+|.|..-+..+|..+|+
T Consensus 195 ~~~~~~-~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 195 YVETVK-KKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHHHH-TCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTC
T ss_pred HHHHHH-hCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCe
Confidence 333344 5669999999999999875 45778888763 6887889996 79999998777678777665
No 38
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=87.72 E-value=0.35 Score=49.17 Aligned_cols=54 Identities=17% Similarity=0.246 Sum_probs=40.1
Q ss_pred CCCCeEEEcCcEEEEEEe---------------cCCCeEEEEEEEecCCeEEEE--EeCcEEEEcCcchhhhHHHHHhC
Q psy14407 169 KRTNLYVLKRSKVTKVII---------------NDQNVATGVEYVNSKGETVRV--TANKEVILTAGAIANAQLLLLSG 230 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~---------------~~~~~a~gV~~~~~~g~~~~v--~A~k~VILaaGai~Tp~LLl~SG 230 (522)
.+.+++|+.+++|++|.. + ++++.+|+.. +| ++ +| +.||+|+|+. |++|+...|
T Consensus 192 ~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~-~~~v~~V~t~--~g---~i~~~A-d~VV~AtG~~-s~~l~~~~g 262 (448)
T 3axb_A 192 SGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ-EARASAAVLS--DG---TRVEVG-EKLVVAAGVW-SNRLLNPLG 262 (448)
T ss_dssp HHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS-CEEEEEEEET--TS---CEEEEE-EEEEECCGGG-HHHHHGGGT
T ss_pred HhCCCEEEcCCeEEEEEecccccccccccccccC-CCceEEEEeC--CC---EEeecC-CEEEECCCcC-HHHHHHHcC
Confidence 456899999999999988 4 5566676542 45 47 89 4799999985 777765443
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=87.23 E-value=0.47 Score=46.74 Aligned_cols=54 Identities=20% Similarity=0.181 Sum_probs=39.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
.+.+++|+.+++|++|..+ +++ ++|+ ..+| +++|+ .||+|+|+ .|+.|+...|+
T Consensus 165 ~~~Gv~i~~~~~V~~i~~~-~~~-~~V~--t~~g---~i~a~-~VV~A~G~-~s~~l~~~~g~ 218 (381)
T 3nyc_A 165 RRNQGQVLCNHEALEIRRV-DGA-WEVR--CDAG---SYRAA-VLVNAAGA-WCDAIAGLAGV 218 (381)
T ss_dssp HHTTCEEESSCCCCEEEEE-TTE-EEEE--CSSE---EEEES-EEEECCGG-GHHHHHHHHTC
T ss_pred HHCCCEEEcCCEEEEEEEe-CCe-EEEE--eCCC---EEEcC-EEEECCCh-hHHHHHHHhCC
Confidence 4568999999999999987 444 3443 3234 68995 79999997 57777766543
No 40
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=87.05 E-value=0.65 Score=44.61 Aligned_cols=61 Identities=26% Similarity=0.455 Sum_probs=47.8
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
...+++++.+++|++|..+ ++++.+|++.+. +|+..++.++ .||+|.|..-+..+|..+|+
T Consensus 201 ~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 201 KKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HHTTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCC
T ss_pred hcCCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhccc
Confidence 3578999999999999876 566888988753 6777789995 79999998776666655443
No 41
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=85.64 E-value=0.74 Score=43.84 Aligned_cols=56 Identities=14% Similarity=0.205 Sum_probs=45.8
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+..++++++++.|++|..+ ++++.+|++...+|+..++.++ .||+|.|..-++.+|
T Consensus 194 ~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~ 249 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVP-GIFTFVGLNVRNEIL 249 (315)
T ss_dssp HCTTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCS-CEEECSCEEECCGGG
T ss_pred hcCCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecC-eEEEEEcCCCCchhh
Confidence 5789999999999999877 6688889888446888889996 799999976555444
No 42
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=85.23 E-value=1.4 Score=41.91 Aligned_cols=55 Identities=18% Similarity=0.353 Sum_probs=44.7
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
..+++++++++|++|..+ ++++.+|++.+. +|++.++.++ .||+|.|...++.+|
T Consensus 192 ~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWL 247 (310)
T ss_dssp CTTEEEESSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred CCCeEEecCCceEEEEcC-CCcEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHH
Confidence 479999999999999876 567889998873 5777889995 799999977665555
No 43
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=85.09 E-value=1.5 Score=42.18 Aligned_cols=56 Identities=11% Similarity=0.210 Sum_probs=45.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+..++++++++.|++|..+ ++++.+|++.+. +|+..++.++ .||+|.|..-++.+|
T Consensus 220 ~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIV 276 (338)
T ss_dssp HCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGG
T ss_pred hcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHh
Confidence 3459999999999999887 667889998874 6777889996 799999987665544
No 44
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=84.87 E-value=0.74 Score=46.31 Aligned_cols=64 Identities=16% Similarity=0.237 Sum_probs=49.7
Q ss_pred hcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 162 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 162 ~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
++...+ +..++++++++.|++|..+ ++++.+|++.+ |+ ++.++ .||+|+|..-+..+|..+|+.
T Consensus 199 ~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~d--G~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 199 FYQAEH-RAHGVDLRTGAAMDCIEGD-GTKVTGVRMQD--GS--VIPAD-IVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHH-HHTTCEEEETCCEEEEEES-SSBEEEEEESS--SC--EEECS-EEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHH-HhCCCEEEECCEEEEEEec-CCcEEEEEeCC--CC--EEEcC-EEEECCCCccChHHHHhCCCC
Confidence 333334 5679999999999999886 66788887754 65 57885 799999988887888887764
No 45
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=84.76 E-value=0.71 Score=46.29 Aligned_cols=58 Identities=17% Similarity=0.324 Sum_probs=47.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
+..++++++++.|++|..+ ++++.+|++. +|+ ++.++ .||+|+|..-+..+|..+|+.
T Consensus 195 ~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~--dG~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 195 SGAGIRMHYGVRATEIAAE-GDRVTGVVLS--DGN--TLPCD-LVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHTTCEEECSCCEEEEEEE-TTEEEEEEET--TSC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HhCCcEEEECCEEEEEEec-CCcEEEEEeC--CCC--EEEcC-EEEECcCCccCHHHHHhCCCC
Confidence 5779999999999999887 6778888765 465 57885 799999988777888877764
No 46
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=84.41 E-value=1.6 Score=42.57 Aligned_cols=60 Identities=20% Similarity=0.192 Sum_probs=45.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSG 230 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SG 230 (522)
++.+++++++++|++|..+ ++++.+|++...+|+..++.++ .||+|.|..-+..+|..+|
T Consensus 213 ~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEAD-RLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HHTSEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECS-EEEECCCBCCSCGGGGGSS
T ss_pred hcCceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCC-EEEECCCCCCCHHHHHhhc
Confidence 3567999999999999876 6678888887336777789995 7999999655544554443
No 47
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=83.51 E-value=1.5 Score=45.73 Aligned_cols=62 Identities=21% Similarity=0.347 Sum_probs=45.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH-HHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-LLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~-LLl~SGig 232 (522)
++.+++++++++|++|..++++++.++.+...+|+ .++.++ .||+|+|.--+.. +|...|+.
T Consensus 266 ~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~-~~i~aD-~Vv~A~G~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 266 KEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGE-MRIETD-FVFLGLGEQPRSAELAKILGLD 328 (523)
T ss_dssp HHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEE-EEEECS-CEEECCCCEECCHHHHHHHTCC
T ss_pred HhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCc-EEEEcC-EEEECcCCccCCccCHHHcCCc
Confidence 56789999999999998753456655555543554 478996 6999999876666 67666653
No 48
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=83.04 E-value=1.1 Score=47.54 Aligned_cols=55 Identities=24% Similarity=0.241 Sum_probs=43.5
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
.+|...+ ...+++++.+++|++|..+ ++.+.+|++.+ +|+..+++|+ .||.|.|+
T Consensus 132 ~~L~~~a-~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~-~G~~~~i~Ad-lVV~AdG~ 186 (591)
T 3i3l_A 132 KLLLDEA-RSRGITVHEETPVTDVDLS-DPDRVVLTVRR-GGESVTVESD-FVIDAGGS 186 (591)
T ss_dssp HHHHHHH-HHTTCEEETTCCEEEEECC-STTCEEEEEEE-TTEEEEEEES-EEEECCGG
T ss_pred HHHHHHH-HhCCCEEEeCCEEEEEEEc-CCCEEEEEEec-CCceEEEEcC-EEEECCCC
Confidence 3443333 4578999999999999887 55677888876 7888899994 79999997
No 49
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=82.41 E-value=0.99 Score=50.01 Aligned_cols=55 Identities=22% Similarity=0.266 Sum_probs=42.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
...+++|+.+++|++|..+ ++++++|+.. +| +++|+ .||+|+|+- |+.|+...|+
T Consensus 162 ~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~--~G---~i~Ad-~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 162 ESAGVTYRGSTTVTGIEQS-GGRVTGVQTA--DG---VIPAD-IVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHTTCEEECSCCEEEEEEE-TTEEEEEEET--TE---EEECS-EEEECCGGG-HHHHHHTTTC
T ss_pred HHcCCEEECCceEEEEEEe-CCEEEEEEEC--Cc---EEECC-EEEECCccc-hHHHHHHhCC
Confidence 4568999999999999887 6667777542 34 68995 799999984 6777766654
No 50
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=82.00 E-value=1.9 Score=41.13 Aligned_cols=56 Identities=14% Similarity=0.236 Sum_probs=44.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-C-CeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-K-GETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~-g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+.++++++++.|++|..+ ++++.+|++.+. + |+..++.++ .||+|.|..-++.+|
T Consensus 195 ~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIF 252 (320)
T ss_dssp HTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGG
T ss_pred ccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHh
Confidence 4679999999999999876 557888988763 3 666789995 799999977665554
No 51
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=81.77 E-value=2.7 Score=41.94 Aligned_cols=49 Identities=16% Similarity=0.095 Sum_probs=37.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
.+.+++|+.+++|++|..+ ++.+ .|.+...+|+.++++| +.||+|.|.-
T Consensus 117 ~~~gv~i~~~~~v~~i~~~-~~~~-~v~v~~~~g~~~~~~a-~~vV~A~G~~ 165 (421)
T 3nix_A 117 ARQGVDVEYEVGVTDIKFF-GTDS-VTTIEDINGNKREIEA-RFIIDASGYG 165 (421)
T ss_dssp HHHTCEEECSEEEEEEEEE-TTEE-EEEEEETTSCEEEEEE-EEEEECCGGG
T ss_pred HhCCCEEEcCCEEEEEEEe-CCEE-EEEEEcCCCCEEEEEc-CEEEECCCCc
Confidence 3458999999999999887 3333 2555555788889999 5799999953
No 52
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=81.38 E-value=1.2 Score=47.04 Aligned_cols=61 Identities=13% Similarity=0.291 Sum_probs=44.5
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEe----cCCeE-------EEEEeCcEEEEcCcchhhh
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVN----SKGET-------VRVTANKEVILTAGAIANA 223 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~----~~g~~-------~~v~A~k~VILaaGai~Tp 223 (522)
.+|...+ ...+++|+.++.|++|+.++++++++|.+.+ .+|+. .+++| +.||+|.|+-..-
T Consensus 148 ~~L~~~a-~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~A-d~VV~AdG~~S~v 219 (584)
T 2gmh_A 148 SWMGEQA-EALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHA-KVTIFAEGCHGHL 219 (584)
T ss_dssp HHHHHHH-HHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEEC-SEEEECCCTTCHH
T ss_pred HHHHHHH-HHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEEC-CEEEEeeCCCchH
Confidence 3443333 3458999999999999987446788888764 25543 57899 5899999986653
No 53
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=80.51 E-value=1.4 Score=44.14 Aligned_cols=49 Identities=16% Similarity=0.247 Sum_probs=38.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
...+.+|++++.|++|..+ ++++ | .. +|+ +++|+ .||+|+|+-.+++||
T Consensus 200 ~~~G~~i~~~~~V~~i~~~-~~~v--V--~~-~g~--~~~ad-~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 200 MENKGKILTRKEVVEINIE-EKKV--Y--TR-DNE--EYSFD-VAISNVGVRETVKLI 248 (421)
T ss_dssp HTTTCEEESSCCEEEEETT-TTEE--E--ET-TCC--EEECS-EEEECSCHHHHHHHH
T ss_pred HHCCCEEEcCCeEEEEEEE-CCEE--E--Ee-CCc--EEEeC-EEEECCCHHHHHHhc
Confidence 4668999999999999887 5655 3 33 554 57895 799999998888866
No 54
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=80.33 E-value=1.2 Score=46.74 Aligned_cols=47 Identities=21% Similarity=0.308 Sum_probs=37.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 221 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~ 221 (522)
...+++|+.+++|++|..+ ++++.+|++. +|+ +++|+ .||+|.|+-.
T Consensus 231 ~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~--~G~--~i~Ad-~VVlA~G~~s 277 (549)
T 3nlc_A 231 IELGGEIRFSTRVDDLHME-DGQITGVTLS--NGE--EIKSR-HVVLAVGHSA 277 (549)
T ss_dssp HHTTCEEESSCCEEEEEES-SSBEEEEEET--TSC--EEECS-CEEECCCTTC
T ss_pred HhcCCEEEeCCEEEEEEEe-CCEEEEEEEC--CCC--EEECC-EEEECCCCCh
Confidence 3568999999999999987 6678888765 455 58895 7999999854
No 55
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=80.14 E-value=2.9 Score=41.43 Aligned_cols=50 Identities=18% Similarity=0.273 Sum_probs=35.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
.+.+++|+.+++|++|..+ ++.+ .+...+| +++| +.||+|+|+ .++.|+-
T Consensus 164 ~~~Gv~i~~~~~V~~i~~~-~~~v---~v~t~~g---~i~a-~~VV~A~G~-~s~~l~~ 213 (397)
T 2oln_A 164 QAAGATLRAGETVTELVPD-ADGV---SVTTDRG---TYRA-GKVVLACGP-YTNDLLE 213 (397)
T ss_dssp HHTTCEEEESCCEEEEEEE-TTEE---EEEESSC---EEEE-EEEEECCGG-GHHHHHG
T ss_pred HHcCCEEECCCEEEEEEEc-CCeE---EEEECCC---EEEc-CEEEEcCCc-ChHHHhh
Confidence 3568999999999999887 4433 3333233 5889 479999998 4556553
No 56
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=79.91 E-value=3 Score=40.75 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=41.7
Q ss_pred cccCCCCCeEEEcCcEEEEEEecCC----------------C--eEEEEEEEec----CC------eEEEEEeCcEEEEc
Q psy14407 165 PIAGKRTNLYVLKRSKVTKVIINDQ----------------N--VATGVEYVNS----KG------ETVRVTANKEVILT 216 (522)
Q Consensus 165 ~~~~~~~n~~v~~~~~V~~I~~~~~----------------~--~a~gV~~~~~----~g------~~~~v~A~k~VILa 216 (522)
.+. ..+|++|+.++.|+.|+.+++ + ++.||.+... +| ...+|+| +.||+|
T Consensus 169 ~a~-~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A-k~VV~A 246 (344)
T 3jsk_A 169 KVL-QRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA-PVIIST 246 (344)
T ss_dssp HHH-TCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC-SEEEEC
T ss_pred HHH-hCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc-CEEEEC
Confidence 344 458999999999999988721 2 8999988631 33 3478999 589999
Q ss_pred Ccchhh
Q psy14407 217 AGAIAN 222 (522)
Q Consensus 217 aGai~T 222 (522)
.|.-..
T Consensus 247 TG~~s~ 252 (344)
T 3jsk_A 247 TGHDGP 252 (344)
T ss_dssp CCSSSS
T ss_pred CCCCch
Confidence 996443
No 57
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=79.40 E-value=1.1 Score=44.30 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=37.8
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLS 229 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~S 229 (522)
.+.+++|+.+++|++|..+ ++++ +|+.. +| +++| +.||+|+|+. ++.|+...
T Consensus 175 ~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~--~g---~~~a-~~vV~A~G~~-s~~l~~~~ 226 (382)
T 1ryi_A 175 KMLGAEIFEHTPVLHVERD-GEAL-FIKTP--SG---DVWA-NHVVVASGVW-SGMFFKQL 226 (382)
T ss_dssp HHTTCEEETTCCCCEEECS-SSSE-EEEET--TE---EEEE-EEEEECCGGG-THHHHHHT
T ss_pred HHCCCEEEcCCcEEEEEEE-CCEE-EEEcC--Cc---eEEc-CEEEECCChh-HHHHHHhc
Confidence 4568999999999999887 4444 55432 34 6889 4799999985 66666543
No 58
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=78.91 E-value=2.3 Score=38.79 Aligned_cols=57 Identities=19% Similarity=0.293 Sum_probs=39.2
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
.+|...+.+.++++++ +++|++|..+ ++++.+|+.. +|+ +++| +.||+|+|+....+
T Consensus 72 ~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~--~g~--~i~a-~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 72 ARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTW--EGP--PARG-EKVVLAVGSFLGAR 128 (232)
T ss_dssp HHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEET--TSC--CEEC-SEEEECCTTCSSCE
T ss_pred HHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEEC--CCC--EEEC-CEEEECCCCChhhc
Confidence 3443433133599999 5799999887 5677777653 464 5889 47999999955444
No 59
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=78.48 E-value=3.7 Score=39.30 Aligned_cols=56 Identities=16% Similarity=0.269 Sum_probs=44.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCC--eEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQN--VATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~--~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+..++++++++.|++|..+ ++ ++.+|++.+. +|+..++.++ .||+|.|..-+..+|
T Consensus 206 ~~~gv~i~~~~~v~~i~~~-~~~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGD-GERDVLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFL 264 (333)
T ss_dssp TCTTEEEECSEEEEEEEES-SSSSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred hCCCeeEecCCceEEEeCC-CCccceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHh
Confidence 5789999999999999876 33 7888888763 5777789995 799999987666554
No 60
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=78.00 E-value=3.2 Score=43.08 Aligned_cols=55 Identities=20% Similarity=0.359 Sum_probs=44.8
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+|+++++++.|++|.-+ ++++.+|++.+. +|+..++.++ .||+|.|..-+..+|
T Consensus 403 ~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 403 LKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWL 458 (521)
T ss_dssp CTTEEEECSEEEEEEEEC-SSSEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGG
T ss_pred CCCcEEEeCCEEEEEEcC-CCcEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHH
Confidence 379999999999999876 667889999874 6778889995 799999976555544
No 61
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=76.52 E-value=4.6 Score=38.17 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=45.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLL 228 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~ 228 (522)
+..++++++++.|++|..+ ++++.+|++.+. +|++.++.++ .||+|.|..-+..+|..
T Consensus 190 ~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~ 248 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQ 248 (311)
T ss_dssp TCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBC
T ss_pred hCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhc
Confidence 4579999999999999876 566778888753 6777789996 79999997665555543
No 62
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=76.31 E-value=4.6 Score=38.58 Aligned_cols=55 Identities=16% Similarity=0.315 Sum_probs=43.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+..+++++++++|++|..+ +++.+|++.+. +|+..++.++ .||+|.|..-+..+|
T Consensus 199 ~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 199 ANPKMKFIWDTAVEEIQGA--DSVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFV 254 (325)
T ss_dssp TCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred hcCCceEecCCceEEEccC--CcEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHH
Confidence 4579999999999999865 45778888753 6777789995 799999976655554
No 63
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.28 E-value=2.7 Score=41.14 Aligned_cols=58 Identities=26% Similarity=0.279 Sum_probs=43.8
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhh
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANA 223 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp 223 (522)
.+|...+ ...+++++.+++|+.+..+ ++++++|.... +++..+++| +.||.|-|+ .|.
T Consensus 106 ~~L~~~a-~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~-~~~~~~~~a-~~vIgAdG~-~S~ 163 (397)
T 3oz2_A 106 KHLAALA-AKAGADVWVKSPALGVIKE-NGKVAGAKIRH-NNEIVDVRA-KMVIAADGF-ESE 163 (397)
T ss_dssp HHHHHHH-HHHTCEEESSCCEEEEEEE-TTEEEEEEEEE-TTEEEEEEE-EEEEECCCT-TCH
T ss_pred HHHHHHH-HhcCcEEeeeeeeeeeeec-cceeeeeeecc-cccceEEEE-eEEEeCCcc-ccH
Confidence 3443333 4678999999999999887 77888888777 788899999 566666664 554
No 64
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=75.63 E-value=1.3 Score=45.35 Aligned_cols=47 Identities=17% Similarity=0.266 Sum_probs=35.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
...+.+|+.++.|++|..++++++++|+.. +|+ +++|+ .||++++-+
T Consensus 267 ~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~--~G~--~i~Ad-~VI~a~~~~ 313 (475)
T 3p1w_A 267 AINGGTFMLNKNVVDFVFDDDNKVCGIKSS--DGE--IAYCD-KVICDPSYV 313 (475)
T ss_dssp HHC--CEESSCCEEEEEECTTSCEEEEEET--TSC--EEEEE-EEEECGGGC
T ss_pred HHcCCEEEeCCeEEEEEEecCCeEEEEEEC--CCc--EEECC-EEEECCCcc
Confidence 466899999999999999436789998765 465 47894 699999865
No 65
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=75.60 E-value=1.2 Score=44.55 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=34.4
Q ss_pred CCCCeEEEcCcEEE---------EEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHH-HhCC
Q psy14407 169 KRTNLYVLKRSKVT---------KVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL-LSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~---------~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl-~SGi 231 (522)
...+++++.+++|+ +|..+ ++++ +|+.. +| +++| +.||+|+|+ .|+.|+. ..|+
T Consensus 183 ~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~--~g---~i~a-~~VV~A~G~-~s~~l~~~~~g~ 246 (405)
T 3c4n_A 183 IGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHE--TR---QIRA-GVIIVAAGA-AGPALVEQGLGL 246 (405)
T ss_dssp HTTTCEEECSCEEEEETTEEEEECBCC---------CBC--CE---EEEE-EEEEECCGG-GHHHHHHHHHCC
T ss_pred HHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEEC--Cc---EEEC-CEEEECCCc-cHHHHHHHhcCC
Confidence 45689999999999 77665 4444 44321 33 6899 579999997 5767775 5443
No 66
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=74.96 E-value=2.3 Score=45.72 Aligned_cols=51 Identities=10% Similarity=0.104 Sum_probs=36.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
.+.+++|+.+++|++|..+ ++++ .| ...+|. +++|+ .||+|+|+. ++.|+.
T Consensus 428 ~~~Gv~i~~~t~V~~l~~~-~~~v-~V--~t~~G~--~i~Ad-~VVlAtG~~-s~~l~~ 478 (676)
T 3ps9_A 428 QQQGLQIYYQYQLQNFSRK-DDCW-LL--NFAGDQ--QATHS-VVVLANGHQ-ISRFSQ 478 (676)
T ss_dssp HHTTCEEEESCCEEEEEEE-TTEE-EE--EETTSC--EEEES-EEEECCGGG-GGCSTT
T ss_pred HhCCCEEEeCCeeeEEEEe-CCeE-EE--EECCCC--EEECC-EEEECCCcc-hhcccc
Confidence 3568999999999999987 4442 33 332455 48894 799999985 655543
No 67
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.17 E-value=3.1 Score=39.68 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=45.8
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
...++++++++.|++|..+ ++ +.+|++.+. +|+..++.++ .||+|.|..-++.+|..+|+
T Consensus 200 ~~~gv~~~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGE-DK-IEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp HHSSCEEETTEEEEEEECS-SS-CCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSC
T ss_pred hcCCeEEEeCceeeEEecC-Cc-eEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCc
Confidence 3678999999999999876 33 667888774 5667789995 79999997766666555544
No 68
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=73.94 E-value=6.4 Score=38.06 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=37.5
Q ss_pred CCCCeEEEcCcEEEEEEecC--C-C--eEEEEEEEec----CC------eEEEEEe--------------CcEEEEcCcc
Q psy14407 169 KRTNLYVLKRSKVTKVIIND--Q-N--VATGVEYVNS----KG------ETVRVTA--------------NKEVILTAGA 219 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~--~-~--~a~gV~~~~~----~g------~~~~v~A--------------~k~VILaaGa 219 (522)
+.+|++++.+++|+.|+.++ + + ++.||.+... +| ...+|.| .+.||+|.|.
T Consensus 158 ~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~ 237 (326)
T 2gjc_A 158 QLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGH 237 (326)
T ss_dssp TSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCC
T ss_pred HhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCC
Confidence 55799999999999999872 2 5 8999988531 23 3467888 2479999993
No 69
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=73.67 E-value=3.4 Score=42.17 Aligned_cols=57 Identities=23% Similarity=0.263 Sum_probs=43.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
++.+++++++++|++|..+ ++++. |++. +|+ ++.++ .||+|+|..-+..|+..+|+.
T Consensus 213 ~~~GV~i~~~~~v~~i~~~-~~~v~-v~~~--~g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 213 EKNDVVVHTGEKVVRLEGE-NGKVA-RVIT--DKR--TLDAD-LVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp HHTTCEEECSCCEEEEEES-SSBEE-EEEE--SSC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HhcCCEEEeCCEEEEEEcc-CCeEE-EEEe--CCC--EEEcC-EEEECCCCCcCHHHHHhCCcc
Confidence 5679999999999999875 45554 5544 465 68895 799999988666677777763
No 70
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=73.24 E-value=2 Score=44.12 Aligned_cols=48 Identities=10% Similarity=0.205 Sum_probs=37.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~T 222 (522)
++.|++++.++.| +|..+ ++++.||.+.+.+| ++.+ +.||||+|+...
T Consensus 130 ~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g---~~~a-~~VVlAtGg~~~ 177 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGL---VEDV-DKLVLATGGYSY 177 (472)
T ss_dssp HHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEE---ECCC-SEEEECCCCCGG
T ss_pred HhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCC---eEEe-eeEEECCCCCcc
Confidence 4678999999999 99887 67898988764223 3668 579999998653
No 71
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=72.06 E-value=3.4 Score=40.58 Aligned_cols=49 Identities=27% Similarity=0.348 Sum_probs=34.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+.+++++.+++|++|..+ ++. |.+.. ++. +++| +.||+|+|+ .+..|+
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~-~~~---~~v~~-~~g--~~~a-~~vV~A~G~-~~~~l~ 209 (389)
T 2gf3_A 161 EARGAKVLTHTRVEDFDIS-PDS---VKIET-ANG--SYTA-DKLIVSMGA-WNSKLL 209 (389)
T ss_dssp HHTTCEEECSCCEEEEEEC-SSC---EEEEE-TTE--EEEE-EEEEECCGG-GHHHHG
T ss_pred HHCCCEEEcCcEEEEEEec-CCe---EEEEe-CCC--EEEe-CEEEEecCc-cHHHHh
Confidence 4568999999999999887 333 23333 233 5889 479999998 455555
No 72
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=70.53 E-value=5.9 Score=40.07 Aligned_cols=61 Identities=15% Similarity=0.207 Sum_probs=41.7
Q ss_pred hhhcccccCCCCCeEEEcCcEEEEEEec-CCCeEEEEEE--EecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 160 DAYLTPIAGKRTNLYVLKRSKVTKVIIN-DQNVATGVEY--VNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 160 ~~~l~~~~~~~~n~~v~~~~~V~~I~~~-~~~~a~gV~~--~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
..|+.... ++-+.+++.+++|++|..+ ++++...+++ .+..|++.++.++ .||||.|+ +|+
T Consensus 130 ~~~l~~~~-~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d-~lVlAtG~--~p~ 193 (463)
T 3s5w_A 130 NDYLRWVA-SHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR-ALVVSPGG--TPR 193 (463)
T ss_dssp HHHHHHHH-TTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES-EEEECCCC--EEC
T ss_pred HHHHHHHH-HHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC-EEEECCCC--CCC
Confidence 35665544 5556889999999999886 3345543444 4424667789995 69999997 454
No 73
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=70.34 E-value=3.4 Score=43.95 Aligned_cols=46 Identities=26% Similarity=0.468 Sum_probs=35.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhh
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~T 222 (522)
.+|++|+ +++|+.|..+ ++++.+|.+. +|. +++| +.||+|+|+...
T Consensus 137 ~~GV~I~-~~~V~~L~~e-~g~V~GV~t~--dG~--~I~A-d~VVLATGt~s~ 182 (651)
T 3ces_A 137 QPNLMIF-QQAVEDLIVE-NDRVVGAVTQ--MGL--KFRA-KAVVLTVGTFLD 182 (651)
T ss_dssp CTTEEEE-ECCEEEEEES-SSBEEEEEET--TSE--EEEE-EEEEECCSTTTC
T ss_pred CCCCEEE-EEEEEEEEec-CCEEEEEEEC--CCC--EEEC-CEEEEcCCCCcc
Confidence 3799995 6799999887 6778888764 463 6889 579999998644
No 74
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=69.54 E-value=3.7 Score=43.61 Aligned_cols=47 Identities=30% Similarity=0.523 Sum_probs=36.8
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhh
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANA 223 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp 223 (522)
.+|++|+ +++|+.|..+ ++++.+|+.. +|. +++| +.||+|+|+....
T Consensus 136 ~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~--dG~--~i~A-daVVLATG~~s~~ 182 (637)
T 2zxi_A 136 QENLYIK-QEEVVDIIVK-NNQVVGVRTN--LGV--EYKT-KAVVVTTGTFLNG 182 (637)
T ss_dssp CTTEEEE-ESCEEEEEES-SSBEEEEEET--TSC--EEEC-SEEEECCTTCBTC
T ss_pred CCCCEEE-EeEEEEEEec-CCEEEEEEEC--CCc--EEEe-CEEEEccCCCccC
Confidence 4799995 7899999887 6778888764 464 5889 5799999986443
No 75
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=68.81 E-value=2.1 Score=46.20 Aligned_cols=52 Identities=8% Similarity=0.075 Sum_probs=36.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
.+.+++|+.+++|++|..+ ++++ .|+.. +|. .+++|+ .||+|+|+. ++.|+.
T Consensus 423 ~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~--~G~-~~i~Ad-~VVlAtG~~-s~~l~~ 474 (689)
T 3pvc_A 423 QQNGMTCHYQHELQRLKRI-DSQW-QLTFG--QSQ-AAKHHA-TVILATGHR-LPEWEQ 474 (689)
T ss_dssp HHTTCEEEESCCEEEEEEC-SSSE-EEEEC---CC-CCEEES-EEEECCGGG-TTCSTT
T ss_pred HhCCCEEEeCCeEeEEEEe-CCeE-EEEeC--CCc-EEEECC-EEEECCCcc-hhcccc
Confidence 3568999999999999987 4432 34332 343 147894 799999985 655543
No 76
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=68.44 E-value=5.1 Score=40.26 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=38.2
Q ss_pred hcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 162 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 162 ~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
.|...+ .+.+++|+.+++|++|..+ ++. +.+...+| +++|+ .||+|+|+...|+
T Consensus 137 ~L~~~l-~~~Gv~i~~~~~V~~i~~~-~~~---~~V~~~~g---~i~ad-~VIlAtG~~S~p~ 190 (417)
T 3v76_A 137 MLMAEM-KEAGVQLRLETSIGEVERT-ASG---FRVTTSAG---TVDAA-SLVVASGGKSIPK 190 (417)
T ss_dssp HHHHHH-HHHTCEEECSCCEEEEEEE-TTE---EEEEETTE---EEEES-EEEECCCCSSCGG
T ss_pred HHHHHH-HHCCCEEEECCEEEEEEEe-CCE---EEEEECCc---EEEee-EEEECCCCccCCC
Confidence 343333 4568999999999999887 332 33443234 68995 7999999987664
No 77
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=67.80 E-value=7.9 Score=36.98 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=44.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHHhC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSG 230 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~SG 230 (522)
+..++++++++.|++|..+ +++.+|++... +|+..++.++ .||+|.|.--+..+|..+|
T Consensus 202 ~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 202 EEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWG 261 (335)
T ss_dssp HTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSC
T ss_pred ccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhcc
Confidence 4668999999999999774 45677888754 5776789996 7999999765544554444
No 78
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=67.43 E-value=4.7 Score=39.28 Aligned_cols=49 Identities=27% Similarity=0.280 Sum_probs=34.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+.+++++.+++|++|..+ ++. |.+...+| +++| +.||+|+|+. |+.|+
T Consensus 160 ~~~G~~i~~~~~V~~i~~~-~~~---~~v~~~~g---~~~a-~~vV~a~G~~-s~~l~ 208 (372)
T 2uzz_A 160 KEAGCAQLFNCPVTAIRHD-DDG---VTIETADG---EYQA-KKAIVCAGTW-VKDLL 208 (372)
T ss_dssp HHTTCEEECSCCEEEEEEC-SSS---EEEEESSC---EEEE-EEEEECCGGG-GGGTS
T ss_pred HHCCCEEEcCCEEEEEEEc-CCE---EEEEECCC---eEEc-CEEEEcCCcc-HHhhc
Confidence 4568999999999999887 333 23333245 3889 4799999974 55443
No 79
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=66.82 E-value=13 Score=37.59 Aligned_cols=49 Identities=16% Similarity=0.114 Sum_probs=39.3
Q ss_pred CCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhh
Q psy14407 171 TNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 171 ~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~T 222 (522)
.+++|+++++|++|..+ ++. ..|++.+. +|+..++.++ .||+|.|..-.
T Consensus 329 ~~v~i~~~~~v~~v~~~-~~~-~~v~~~~~~~g~~~~~~~D-~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATAT-AQG-IELALRDAGSGELSVETYD-AVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEE-TTE-EEEEEEETTTCCEEEEEES-EEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEec-CCE-EEEEEEEcCCCCeEEEECC-EEEEeeCCCCC
Confidence 68999999999999876 433 45677654 6888889996 79999997655
No 80
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=64.80 E-value=2.6 Score=42.15 Aligned_cols=57 Identities=18% Similarity=0.144 Sum_probs=44.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
++.++++++++.|++|..+ + ++.+|++. +|+ ++.++ .||+|.|..-+..+|..+|+.
T Consensus 196 ~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~--dg~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 196 TELGVQVELGTGVVGFSGE-G-QLEQVMAS--DGR--SFVAD-SALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHTCEEECSCCEEEEECS-S-SCCEEEET--TSC--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HHCCCEEEeCCEEEEEecc-C-cEEEEEEC--CCC--EEEcC-EEEEeeCCeecHHHHHhCCCc
Confidence 5678999999999999765 3 55666654 465 57885 799999998887888887764
No 81
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=64.20 E-value=9.3 Score=37.56 Aligned_cols=50 Identities=10% Similarity=0.061 Sum_probs=36.8
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhh
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~T 222 (522)
..+++|+.+++|++|..++++ ...|++.+ +|++.++++ +.||.|.|.-..
T Consensus 115 ~~g~~i~~~~~v~~i~~~~~~-~~~v~~~~-~g~~~~~~a-~~vV~AdG~~S~ 164 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQGE-RPYVTFER-DGERLRLDC-DYIAGCDGFHGI 164 (394)
T ss_dssp HTTCEEESSCEEEEEECTTSS-SCEEEEEE-TTEEEEEEC-SEEEECCCTTCS
T ss_pred hcCCeEEeceeEEEEEEecCC-ceEEEEec-CCcEEEEEe-CEEEECCCCCcH
Confidence 458999999999999876222 23466644 788778999 479999996433
No 82
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=64.09 E-value=3.9 Score=41.71 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=44.5
Q ss_pred hhhcccccCCCCCeE--EEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 160 DAYLTPIAGKRTNLY--VLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 160 ~~~l~~~~~~~~n~~--v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
..||...+ ++.+++ |+.+++|++|..++++....|++.+. +|+..++.++ .||+|.|....|++.
T Consensus 104 ~~~l~~~~-~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 104 WDYIKGRV-EKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHHHHHH-HHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCC
T ss_pred HHHHHHHH-HHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccC
Confidence 35554433 344676 88999999998872222345666552 4666788995 799999987788755
No 83
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=63.72 E-value=1.3 Score=45.92 Aligned_cols=55 Identities=9% Similarity=-0.045 Sum_probs=40.3
Q ss_pred CCCCeEEEcCcEEEEEEec-CCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 169 KRTNLYVLKRSKVTKVIIN-DQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~-~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
...+++|+.+++|++|..+ +++....|++.+. +|+..++++ +.||+|.|+-..++
T Consensus 177 ~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~a-d~VV~A~G~~S~~r 233 (497)
T 2bry_A 177 LLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEF-DVLISAAGGKFVPE 233 (497)
T ss_dssp HHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCB-SEEEECCCTTCCCT
T ss_pred HhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEc-CEEEECCCCCcccc
Confidence 4578999999999999875 2344566777543 464456889 47999999876654
No 84
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=63.47 E-value=2.8 Score=41.98 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=38.0
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecC---CCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIIND---QNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~---~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
.+|...+ ++.+++|+.++.|++|..++ +++ +.+...+| +++|+ .||+|+|+...|+
T Consensus 113 ~~L~~~~-~~~Gv~i~~~~~v~~i~~~~~g~~~~---~~v~~~~g---~i~ad-~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 113 EMLKSEC-DKYGAKILLRSEVSQVERIQNDEKVR---FVLQVNST---QWQCK-NLIVATGGLSMPG 171 (401)
T ss_dssp HHHHHHH-HHHTCEEECSCCEEEEEECCSCSSCC---EEEEETTE---EEEES-EEEECCCCSSCGG
T ss_pred HHHHHHH-HHCCCEEEeCCEEEEEEcccCcCCCe---EEEEECCC---EEECC-EEEECCCCccCCC
Confidence 3443433 46789999999999998751 222 23333233 68995 7999999988775
No 85
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=62.18 E-value=8.6 Score=38.61 Aligned_cols=58 Identities=24% Similarity=0.331 Sum_probs=44.3
Q ss_pred CCCCeEEEcCcEEEEEEe--cCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVII--NDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~--~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
+..++++++++.|++|.. + ++++.+|++. +|+ ++.++ .||+|.|..-...||..+|+.
T Consensus 202 ~~~GV~i~~~~~v~~i~~~~~-~~~v~~v~~~--~G~--~i~~D-~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 202 REAGVDIRTGTQVCGFEMSTD-QQKVTAVLCE--DGT--RLPAD-LVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHTCEEECSCCEEEEEECTT-TCCEEEEEET--TSC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HhCCeEEEeCCEEEEEEeccC-CCcEEEEEeC--CCC--EEEcC-EEEECCCCCcCcchhhccCCC
Confidence 467899999999999987 4 4567777654 464 57885 799999987666777777763
No 86
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=60.11 E-value=6 Score=40.66 Aligned_cols=57 Identities=18% Similarity=0.317 Sum_probs=42.8
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
+..++++++++.|++|..+ ++++ .|++. +|+ ++.++ .||+|+|..-+..||..+|+.
T Consensus 237 ~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~--dG~--~i~aD-~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 237 RREGVKVMPNAIVQSVGVS-SGKL-LIKLK--DGR--KVETD-HIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HTTTCEEECSCCEEEEEEE-TTEE-EEEET--TSC--EEEES-EEEECCCEEECCTTHHHHTCC
T ss_pred HhcCCEEEeCCEEEEEEec-CCeE-EEEEC--CCC--EEECC-EEEECCCCCccHHHHHHcCCc
Confidence 5779999999999999765 4433 44433 565 57885 799999988777777777763
No 87
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=59.99 E-value=6.9 Score=33.63 Aligned_cols=59 Identities=24% Similarity=0.148 Sum_probs=38.8
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
.++...+ ++.+++++.+ +|++|..+ ++. +.+...+| ++.+ +.||+|.|.- |.++...|+
T Consensus 60 ~~l~~~~-~~~gv~v~~~-~v~~i~~~-~~~---~~v~~~~g---~i~a-d~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 60 RRLEAHA-RRYGAEVRPG-VVKGVRDM-GGV---FEVETEEG---VEKA-ERLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHH-HHTTCEEEEC-CCCEEEEC-SSS---EEEECSSC---EEEE-EEEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHH-HHcCCEEEeC-EEEEEEEc-CCE---EEEEECCC---EEEE-CEEEECCCCC--CCccccCCC
Confidence 3444434 4668999999 99999876 332 23333245 6889 4799999975 556555554
No 88
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=59.97 E-value=11 Score=38.87 Aligned_cols=57 Identities=16% Similarity=0.108 Sum_probs=39.5
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhh
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~T 222 (522)
.+|...+ ...+++|+.+++|++|..+ ++.++ |++.+.+| ..+++| +.||.|.|+-..
T Consensus 110 ~~L~~~~-~~~gv~v~~~~~v~~i~~~-~~~v~-v~~~~~~g-~~~~~a-~~vVgADG~~S~ 166 (500)
T 2qa1_A 110 THLEQWA-TGLGADIRRGHEVLSLTDD-GAGVT-VEVRGPEG-KHTLRA-AYLVGCDGGRSS 166 (500)
T ss_dssp HHHHHHH-HHTTCEEEETCEEEEEEEE-TTEEE-EEEEETTE-EEEEEE-SEEEECCCTTCH
T ss_pred HHHHHHH-HHCCCEEECCcEEEEEEEc-CCeEE-EEEEcCCC-CEEEEe-CEEEECCCcchH
Confidence 3443333 3457999999999999887 44443 66666344 578999 479999997543
No 89
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=59.50 E-value=10 Score=39.02 Aligned_cols=59 Identities=20% Similarity=0.200 Sum_probs=42.6
Q ss_pred hhhhcccccCCCCCeEEEcCcEEEEEEec-CCC-----eEEEEEEEec-CCeEEEEEeCcEEEEcCcc
Q psy14407 159 ADAYLTPIAGKRTNLYVLKRSKVTKVIIN-DQN-----VATGVEYVNS-KGETVRVTANKEVILTAGA 219 (522)
Q Consensus 159 ~~~~l~~~~~~~~n~~v~~~~~V~~I~~~-~~~-----~a~gV~~~~~-~g~~~~v~A~k~VILaaGa 219 (522)
...||...+ ++-+..|..+++|++|..+ .++ ....|+..+. +|+..++.| +.||+|.|.
T Consensus 147 ~~~Yl~~~A-~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~a-r~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCA-QQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRT-RKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHH-HTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEE-EEEEECCCC
T ss_pred HHHHHHHHH-HHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEe-CEEEECcCC
Confidence 346776655 4555679999999999886 211 2456777764 678889999 579999994
No 90
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=59.30 E-value=10 Score=39.28 Aligned_cols=50 Identities=8% Similarity=0.102 Sum_probs=35.2
Q ss_pred CCCeEEEcCcEEEEEEecCCCeE--EEEEEEecCCeEEEEEeCcEEEEcCcchh
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVA--TGVEYVNSKGETVRVTANKEVILTAGAIA 221 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a--~gV~~~~~~g~~~~v~A~k~VILaaGai~ 221 (522)
..+++|+.+++|++|..++++++ +.|++.+.++ ..+++| +.||.|.|+-.
T Consensus 132 ~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~-~~~i~a-~~vV~AdG~~S 183 (535)
T 3ihg_A 132 KHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDG-EYDLRA-GYLVGADGNRS 183 (535)
T ss_dssp HTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTE-EEEEEE-EEEEECCCTTC
T ss_pred hCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCC-eEEEEe-CEEEECCCCcc
Confidence 45899999999999988733222 2344555233 678999 57999999743
No 91
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=58.95 E-value=9.6 Score=40.49 Aligned_cols=47 Identities=28% Similarity=0.377 Sum_probs=35.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~T 222 (522)
+.+|++|+. ..|+.|..+ ++++.||... +|. +++| +.||+|+|+.-.
T Consensus 129 ~~~GV~I~~-~~V~~L~~d-~g~V~GV~t~--~G~--~i~A-d~VVLATG~~s~ 175 (641)
T 3cp8_A 129 HEPNIDLLQ-DTVIGVSAN-SGKFSSVTVR--SGR--AIQA-KAAILACGTFLN 175 (641)
T ss_dssp TCTTEEEEE-CCEEEEEEE-TTEEEEEEET--TSC--EEEE-EEEEECCTTCBT
T ss_pred hCCCCEEEe-eEEEEEEec-CCEEEEEEEC--CCc--EEEe-CEEEECcCCCCC
Confidence 347999964 589999887 6778888754 464 6889 579999998643
No 92
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=58.83 E-value=15 Score=37.12 Aligned_cols=59 Identities=15% Similarity=0.168 Sum_probs=40.5
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH--HHHhCC
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGI 231 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L--Ll~SGi 231 (522)
+.+++++++++|++|..+ ++. ..|++.+.+|+..++.++ .||+|+|..-+..+ |...|+
T Consensus 228 ~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 228 NEKMKFMTSTKVVGGTNN-GDS-VSLEVEGKNGKRETVTCE-ALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HTCCEEECSCEEEEEEEC-SSS-EEEEEECC---EEEEEES-EEEECSCEEECCTTSCHHHHTC
T ss_pred cCCcEEEeCCEEEEEEEc-CCe-EEEEEEcCCCceEEEECC-EEEECCCcccCCCCCCchhcCC
Confidence 568999999999999876 332 345554224655678996 79999998766666 555555
No 93
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=58.39 E-value=9.3 Score=37.65 Aligned_cols=47 Identities=15% Similarity=0.208 Sum_probs=33.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEE-EEEEEecCCeEEEEEeCcEEEEcCcchhh
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVAT-GVEYVNSKGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~-gV~~~~~~g~~~~v~A~k~VILaaGai~T 222 (522)
.++++|+.+++|++|..+ ++.++ .|++. +|+ ++++ +.||+|.|+-..
T Consensus 120 ~~gv~i~~~~~v~~i~~~-~~~v~g~v~~~--~g~--~~~a-d~vV~AdG~~s~ 167 (399)
T 2x3n_A 120 EATVEMLFETRIEAVQRD-ERHAIDQVRLN--DGR--VLRP-RVVVGADGIASY 167 (399)
T ss_dssp CTTEEEECSCCEEEEEEC-TTSCEEEEEET--TSC--EEEE-EEEEECCCTTCH
T ss_pred cCCcEEEcCCEEEEEEEc-CCceEEEEEEC--CCC--EEEC-CEEEECCCCChH
Confidence 348999999999999887 44443 34442 565 6888 579999997443
No 94
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=57.98 E-value=10 Score=38.12 Aligned_cols=62 Identities=15% Similarity=0.169 Sum_probs=44.8
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
.++...+ ++.++++++++.|++|.-+ +|.+.+.+|...++.++ .||+++|.-. +.++..||.
T Consensus 204 ~~l~~~l-~~~GV~~~~~~~v~~v~~~------~~~~~~~~g~~~~i~~d-~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 204 RLVEDLF-AERNIDWIANVAVKAIEPD------KVIYEDLNGNTHEVPAK-FTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHHHHH-HHTTCEEECSCEEEEECSS------EEEEECTTSCEEEEECS-EEEEECEEEC-CHHHHTTCT
T ss_pred HHHHHHH-HhCCeEEEeCceEEEEeCC------ceEEEeeCCCceEeecc-eEEEeccCCC-chHHHhccc
Confidence 3454444 5779999999999988433 24455557888899995 7999999654 467777764
No 95
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=57.60 E-value=5 Score=38.55 Aligned_cols=59 Identities=24% Similarity=0.179 Sum_probs=40.5
Q ss_pred hhhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 160 DAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 160 ~~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
..|+...+ ++.+++++.+++|++|..+ ++...+| ...+| ++.++ .||+|.|+...|+++
T Consensus 79 ~~~l~~~~-~~~~~~~~~~~~v~~i~~~-~~~~~~v--~~~~g---~~~~d-~vV~AtG~~~~~~~~ 137 (357)
T 4a9w_A 79 LAYLAQYE-QKYALPVLRPIRVQRVSHF-GERLRVV--ARDGR---QWLAR-AVISATGTWGEAYTP 137 (357)
T ss_dssp HHHHHHHH-HHTTCCEECSCCEEEEEEE-TTEEEEE--ETTSC---EEEEE-EEEECCCSGGGBCCC
T ss_pred HHHHHHHH-HHcCCEEEcCCEEEEEEEC-CCcEEEE--EeCCC---EEEeC-EEEECCCCCCCCCCC
Confidence 35555544 5678999999999999887 4443323 33234 68884 799999987766544
No 96
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=57.51 E-value=10 Score=38.50 Aligned_cols=59 Identities=17% Similarity=0.237 Sum_probs=42.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecC--CeEEEEEeCcEEEEcCcchhhhHH--HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSK--GETVRVTANKEVILTAGAIANAQL--LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~--g~~~~v~A~k~VILaaGai~Tp~L--Ll~SGi 231 (522)
+..+++++++++|++|..+ ++. ..|++.+ + |+..++.++ .||+|.|..-+..+ |...|+
T Consensus 221 ~~~gV~i~~~~~v~~i~~~-~~~-~~v~~~~-~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~ 283 (464)
T 2eq6_A 221 EKEGIRVRTKTKAVGYEKK-KDG-LHVRLEP-AEGGEGEEVVVD-KVLVAVGRKPRTEGLGLEKAGV 283 (464)
T ss_dssp HHTTCEEECSEEEEEEEEE-TTE-EEEEEEE-TTCCSCEEEEES-EEEECSCEEESCTTSSHHHHTC
T ss_pred HhcCCEEEcCCEEEEEEEe-CCE-EEEEEee-cCCCceeEEEcC-EEEECCCcccCCCCCChhhcCc
Confidence 4678999999999999876 443 3455553 4 776788995 79999997655554 344554
No 97
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=57.42 E-value=13 Score=38.25 Aligned_cols=49 Identities=16% Similarity=0.157 Sum_probs=36.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 221 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~ 221 (522)
...+++|+.+++|++|..+ ++.++ |++.+.+| +.+++| +.||.|.|+-.
T Consensus 118 ~~~gv~v~~~~~v~~i~~~-~~~v~-v~~~~~~g-~~~~~a-~~vVgADG~~S 166 (499)
T 2qa2_A 118 LGRGAELLRGHTVRALTDE-GDHVV-VEVEGPDG-PRSLTT-RYVVGCDGGRS 166 (499)
T ss_dssp HHTTCEEEESCEEEEEEEC-SSCEE-EEEECSSC-EEEEEE-EEEEECCCTTC
T ss_pred HhCCCEEEcCCEEEEEEEe-CCEEE-EEEEcCCC-cEEEEe-CEEEEccCccc
Confidence 3457999999999999887 33343 66665344 578999 57888888743
No 98
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=56.97 E-value=7.8 Score=39.84 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=37.1
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
.+|...+ ...+++++.+ +|++|..++++++++|+.. +|+ +++| +.||.|.|+
T Consensus 177 ~~L~~~a-~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~--~g~--~~~a-d~vV~A~G~ 228 (511)
T 2weu_A 177 RYLSEYA-IARGVRHVVD-DVQHVGQDERGWISGVHTK--QHG--EISG-DLFVDCTGF 228 (511)
T ss_dssp HHHHHHH-HHTTCEEEEC-CEEEEEECTTSCEEEEEES--SSC--EEEC-SEEEECCGG
T ss_pred HHHHHHH-HHCCCEEEEC-eEeEEEEcCCCCEEEEEEC--CCC--EEEc-CEEEECCCc
Confidence 3443333 3578999999 9999988635567777654 464 6889 479999996
No 99
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=56.58 E-value=11 Score=38.52 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=43.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHH--HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQL--LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~L--Ll~SGi 231 (522)
++.+++++++++|++|..+ ++. ..|++.+. +|+..++.++ .||+|.|..-+..+ |..+|+
T Consensus 250 ~~~gV~v~~~~~v~~i~~~-~~~-~~v~~~~~~~g~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 250 TKQGIDFKLGAKVTGAVKS-GDG-AKVTFEPVKGGEATTLDAE-VVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HHTTCEEECSEEEEEEEEE-TTE-EEEEEEETTSCCCEEEEES-EEEECCCCEECCTTSCHHHHTC
T ss_pred HhCCCEEEECCeEEEEEEe-CCE-EEEEEEecCCCceEEEEcC-EEEEeeCCccCCCccCchhcCc
Confidence 5679999999999999876 433 34666653 3666788996 79999997655554 555555
No 100
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=55.36 E-value=14 Score=36.18 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=43.8
Q ss_pred hcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 162 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 162 ~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
++...+ +..+++++++++|++|..+ ++. ..|++. +|+ ++.++ .||+|+|.--+..||..+|+-
T Consensus 192 ~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~--~g~--~i~~d-~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 192 AVQAGL-EGLGVRFHLGPVLASLKKA-GEG-LEAHLS--DGE--VIPCD-LVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHH-HTTTCEEEESCCEEEEEEE-TTE-EEEEET--TSC--EEEES-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHH-HHcCCEEEeCCEEEEEEec-CCE-EEEEEC--CCC--EEECC-EEEECcCCCcCHHHHHHCCCC
Confidence 333434 5679999999999999876 332 334432 564 57885 799999987666677677653
No 101
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=55.31 E-value=8.1 Score=38.86 Aligned_cols=45 Identities=16% Similarity=0.246 Sum_probs=35.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
...+.+|++++.|++|..+ ++++++|+ . +|+ +++|+ .||+|+|..
T Consensus 245 ~~~G~~i~~~~~V~~I~~~-~~~v~~v~--~-~g~--~~~ad-~VV~a~~~~ 289 (433)
T 1d5t_A 245 AIYGGTYMLNKPVDDIIME-NGKVVGVK--S-EGE--VARCK-QLICDPSYV 289 (433)
T ss_dssp HHHTCCCBCSCCCCEEEEE-TTEEEEEE--E-TTE--EEECS-EEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEe-CCEEEEEE--E-CCe--EEECC-EEEECCCCC
Confidence 3457899999999999987 67787776 2 465 57895 799999976
No 102
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=55.01 E-value=11 Score=38.35 Aligned_cols=61 Identities=16% Similarity=0.166 Sum_probs=41.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHH--HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQL--LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~L--Ll~SGi 231 (522)
++.+++++++++|++|..+ ++....|++.+. .+...++.++ .||+|.|..-+..+ |..+|+
T Consensus 231 ~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~~~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~ 294 (474)
T 1zmd_A 231 QKQGFKFKLNTKVTGATKK-SDGKIDVSIEAASGGKAEVITCD-VLLVCIGRRPFTKNLGLEELGI 294 (474)
T ss_dssp HHTTCEEECSEEEEEEEEC-TTSCEEEEEEETTSCCCEEEEES-EEEECSCEEECCTTSSHHHHTC
T ss_pred HHCCCEEEeCceEEEEEEc-CCceEEEEEEecCCCCceEEEcC-EEEECcCCCcCCCcCCchhcCC
Confidence 5678999999999999876 333234554431 2334568895 79999998766655 455565
No 103
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=54.62 E-value=12 Score=38.85 Aligned_cols=43 Identities=14% Similarity=0.149 Sum_probs=33.1
Q ss_pred CCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 171 TNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 171 ~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
++++++.+ +|++|..++++++++|+.. +|+ +++|+ .||+|.|+
T Consensus 208 ~Gv~i~~~-~V~~i~~~~~g~~~~v~~~--~G~--~i~ad-~vI~A~G~ 250 (550)
T 2e4g_A 208 LGVRHVED-RVEHVQRDANGNIESVRTA--TGR--VFDAD-LFVDCSGF 250 (550)
T ss_dssp SCCEEEEC-CEEEEEECTTSCEEEEEET--TSC--EEECS-EEEECCGG
T ss_pred CCcEEEEC-eEeEEEEcCCCCEEEEEEC--CCC--EEECC-EEEECCCC
Confidence 38999999 9999988634567777654 464 58894 79999996
No 104
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=53.89 E-value=11 Score=38.69 Aligned_cols=50 Identities=20% Similarity=0.339 Sum_probs=37.6
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL 225 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L 225 (522)
+++++++.|++|..+ ++.+. |++.+.+|+..++.++ .||+|.|..-+..+
T Consensus 229 V~i~~~~~v~~i~~~-~~~v~-v~~~~~~G~~~~i~~D-~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 229 FYFDAKARVISTIEK-EDAVE-VIYFDKSGQKTTESFQ-YVLAATGRKANVDK 278 (492)
T ss_dssp SEEETTCEEEEEEEC-SSSEE-EEEECTTCCEEEEEES-EEEECSCCEESCSS
T ss_pred cEEEECCEEEEEEEc-CCEEE-EEEEeCCCceEEEECC-EEEEeeCCccCCCC
Confidence 999999999999886 44333 5555336777789996 79999997655555
No 105
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=53.69 E-value=9.9 Score=38.65 Aligned_cols=53 Identities=13% Similarity=0.171 Sum_probs=38.8
Q ss_pred CCCCeEEEcCcEEEEEEe--cCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 169 KRTNLYVLKRSKVTKVII--NDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~--~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
++.++++++++.|++|.. + ++ ...|++.+. +|...++.++ .||+|.|..-+..
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~-~~-~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~ 290 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDD-KN-VVEIVVEDTKTNKQENLEAE-VLLVAVGRRPYIA 290 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETT-TT-EEEEEEEETTTTEEEEEEES-EEEECSCEEECCT
T ss_pred HHCCCEEEeCCEEEEEEEecC-CC-eEEEEEEEcCCCCceEEECC-EEEECCCCCcCCC
Confidence 567899999999999987 4 33 345666532 4555678995 7999999765554
No 106
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=53.47 E-value=9.1 Score=36.67 Aligned_cols=55 Identities=16% Similarity=0.264 Sum_probs=41.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+..++++++++.|++|..+ + ++.+|++.+. +|+..++.++ .||+|.|..-+..+|
T Consensus 202 ~~~gV~v~~~~~v~~i~~~-~-~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGD-T-TVTGLRVRDTNTGAETTLPVT-GVFVAIGHEPRSGLV 257 (335)
T ss_dssp HCTTEEEECSEEEEEEECS-S-SCCEEEEEEETTSCCEEECCS-CEEECSCEEECCTTT
T ss_pred ccCCcEEEeCceeEEEecC-C-cEeEEEEEEcCCCceEEeecC-EEEEccCCccChhHh
Confidence 4679999999999999765 3 4566777653 5766789996 799999976555444
No 107
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=52.42 E-value=22 Score=36.01 Aligned_cols=43 Identities=26% Similarity=0.213 Sum_probs=31.7
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
.+|++++.|++|..+ +++++ |++.+ .++..+++|+ .||+++..
T Consensus 252 ~~i~~~~~V~~i~~~-~~~v~-v~~~~-g~~~~~~~ad-~vI~a~p~ 294 (489)
T 2jae_A 252 DNIVFGAEVTSMKNV-SEGVT-VEYTA-GGSKKSITAD-YAICTIPP 294 (489)
T ss_dssp GGEETTCEEEEEEEE-TTEEE-EEEEE-TTEEEEEEES-EEEECSCH
T ss_pred CeEEECCEEEEEEEc-CCeEE-EEEec-CCeEEEEECC-EEEECCCH
Confidence 569999999999887 44443 55554 4455678995 79999864
No 108
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=52.17 E-value=11 Score=38.20 Aligned_cols=59 Identities=20% Similarity=0.273 Sum_probs=42.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH--HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L--Ll~SGi 231 (522)
++.+++++++++|++|..+ ++. ..|++.+ +|+..++.++ .||+|.|..-+..+ |..+|+
T Consensus 223 ~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~-~g~~~~~~~D-~vv~a~G~~p~~~~l~~~~~gl 283 (464)
T 2a8x_A 223 KKLGVTILTATKVESIADG-GSQ-VTVTVTK-DGVAQELKAE-KVLQAIGFAPNVEGYGLDKAGV 283 (464)
T ss_dssp HHHTCEEECSCEEEEEEEC-SSC-EEEEEES-SSCEEEEEES-EEEECSCEEECCSSSCHHHHTC
T ss_pred HHcCCEEEeCcEEEEEEEc-CCe-EEEEEEc-CCceEEEEcC-EEEECCCCCccCCCCCchhcCC
Confidence 4678999999999999876 333 2355443 5766678995 79999997766555 455554
No 109
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=52.14 E-value=9.7 Score=38.84 Aligned_cols=56 Identities=20% Similarity=0.201 Sum_probs=41.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
++.+++|++++.|++|..+++++ ..|++.+. +|+..++.++ .||+|.|..-+..+|
T Consensus 238 ~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 238 EERGIPFLRKTVPLSVEKQDDGK-LLVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHTTCCEEETEEEEEEEECTTSC-EEEEEEETTTCCEEEEEES-EEEECSCEEECCGGG
T ss_pred HhCCCEEEeCCEEEEEEEcCCCc-EEEEEecCCCCceeEEEcC-EEEECcccccCcCcC
Confidence 56789999999999998762333 34777663 3567789996 799999976555554
No 110
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=51.57 E-value=14 Score=37.34 Aligned_cols=46 Identities=15% Similarity=0.055 Sum_probs=35.2
Q ss_pred CCCCeEEEcCcEEEEEEecC-CCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 169 KRTNLYVLKRSKVTKVIIND-QNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~-~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
...+.+|++++.|++|..+. ++++++|+. +|+ +++|+ .||+|+|..
T Consensus 253 ~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~---~g~--~~~ad-~VV~a~~~~ 299 (453)
T 2bcg_G 253 AIYGGTYMLDTPIDEVLYKKDTGKFEGVKT---KLG--TFKAP-LVIADPTYF 299 (453)
T ss_dssp HHTTCEEECSCCCCEEEEETTTTEEEEEEE---TTE--EEECS-CEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEECCCCeEEEEEE---CCe--EEECC-EEEECCCcc
Confidence 35678999999999998862 567878764 354 47895 699999975
No 111
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=51.26 E-value=20 Score=36.19 Aligned_cols=50 Identities=18% Similarity=0.138 Sum_probs=34.4
Q ss_pred CeEEEcCcEEEEEEecCCCeEEEEEEEe-cCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 172 NLYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+.+|+++++|++|..+ +++ +.|++.+ .+|+ +++|+ .||+|+++-...+||
T Consensus 249 g~~i~~~~~V~~i~~~-~~~-~~v~~~~~~~g~--~~~ad-~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 249 GDAAHVGARVEGLARE-DGG-WRLIIEEHGRRA--ELSVA-QVVLAAPAHATAKLL 299 (478)
T ss_dssp GGGEESSEEEEEEECC---C-CEEEEEETTEEE--EEECS-EEEECSCHHHHHHHH
T ss_pred hhhEEcCCEEEEEEec-CCe-EEEEEeecCCCc--eEEcC-EEEECCCHHHHHHHh
Confidence 3589999999999887 333 4566532 1343 58895 799999976666655
No 112
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=51.23 E-value=14 Score=35.10 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=35.1
Q ss_pred CeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 172 NLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+++|+.+++|++|..+ ++. |++...+|+ ...+++ .||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~-~~~---~~v~~~~g~-~~~~a~-~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRG-EEH---WNLLDAEGQ-NHGPFS-HVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEEC-SSC---EEEEETTSC-EEEEES-EEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEe-CCE---EEEEeCCCc-CccccC-EEEEcCCHHHHHHhh
Confidence 7899999999999887 332 333343564 334574 799999987777665
No 113
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=50.41 E-value=13 Score=37.91 Aligned_cols=55 Identities=15% Similarity=0.159 Sum_probs=40.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQL 225 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~L 225 (522)
++.++++++++.|++|...+++. ..|++.+. +|+..++.++ .||+|.|-.-+..+
T Consensus 236 ~~~gv~~~~~~~v~~i~~~~~~~-~~v~~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 236 ESHGTQFLKGCVPSHIKKLPTNQ-LQVTWEDHASGKEDTGTFD-TVLWAIGRVPETRT 291 (488)
T ss_dssp HHTTCEEEETEEEEEEEECTTSC-EEEEEEETTTTEEEEEEES-EEEECSCEEESCGG
T ss_pred HHCCCEEEeCCEEEEEEEcCCCc-EEEEEEeCCCCeeEEEECC-EEEEcccCCcccCc
Confidence 56789999999999997752333 34666653 4777789996 79999997655555
No 114
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=50.20 E-value=15 Score=39.14 Aligned_cols=45 Identities=13% Similarity=0.208 Sum_probs=33.5
Q ss_pred CCCCeEEEcCcEEEEEEecCC-CeEEEEEEEecCCeEEEEEeCcEEEEcCc
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAG 218 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~-~~a~gV~~~~~~g~~~~v~A~k~VILaaG 218 (522)
...+.+|++++.|++|+.+++ ++|+||+ ..+|+ +++|+ .||..+.
T Consensus 389 ~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~--~~~Ge--~i~A~-~VVs~~~ 434 (650)
T 1vg0_A 389 AVFGGIYCLRHSVQCLVVDKESRKCKAVI--DQFGQ--RIISK-HFIIEDS 434 (650)
T ss_dssp HHTTCEEESSCCEEEEEEETTTCCEEEEE--ETTSC--EEECS-EEEEEGG
T ss_pred HHcCCEEEeCCEeeEEEEeCCCCeEEEEE--eCCCC--EEEcC-EEEEChh
Confidence 567889999999999999822 7899987 22576 46784 5666444
No 115
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=50.03 E-value=11 Score=37.98 Aligned_cols=63 Identities=13% Similarity=0.115 Sum_probs=42.3
Q ss_pred hhhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCe-EEEEEeCcEEEEcCcchhhhHHH
Q psy14407 160 DAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGE-TVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 160 ~~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~-~~~v~A~k~VILaaGai~Tp~LL 226 (522)
..||.... +.-+..|+.+++|++|..+ ++. ..|++.+. +|+ ..++.++ .||+|.|+...|++.
T Consensus 118 ~~~l~~~~-~~~~~~i~~~t~V~~v~~~-~~~-~~V~~~~~~~G~~~~~~~~d-~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 118 QEYQRIYA-QPLLPFIKLATDVLDIEKK-DGS-WVVTYKGTKAGSPISKDIFD-AVSICNGHYEVPYIP 182 (447)
T ss_dssp HHHHHHHH-GGGGGGEECSEEEEEEEEE-TTE-EEEEEEESSTTCCEEEEEES-EEEECCCSSSSBCBC
T ss_pred HHHHHHHH-HHhhCeEEeCCEEEEEEeC-CCe-EEEEEeecCCCCeeEEEEeC-EEEECCCCCCCCCCC
Confidence 35554433 3335678899999999776 432 34555542 366 5678895 799999997777654
No 116
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=50.02 E-value=9.6 Score=38.54 Aligned_cols=51 Identities=20% Similarity=0.187 Sum_probs=36.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
...+++|++++.|++|..+ ++.+..|+ . ++. ++.|+ .||+|+++-...+||
T Consensus 245 ~~~g~~i~~~~~V~~i~~~-~~~~~~v~--~-~~~--~~~ad-~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 245 TSRGVSVLRGQPVCGLSLQ-AEGRWKVS--L-RDS--SLEAD-HVISAIPASVLSELL 295 (477)
T ss_dssp HHTTCEEECSCCCCEEEEC-GGGCEEEE--C-SSC--EEEES-EEEECSCHHHHHHHS
T ss_pred HhcCCEEEeCCEEEEEEEc-CCceEEEE--E-CCe--EEEcC-EEEECCCHHHHHHhc
Confidence 3458899999999999887 33333443 2 344 48895 799999986666654
No 117
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=49.03 E-value=4.9 Score=41.90 Aligned_cols=61 Identities=21% Similarity=0.204 Sum_probs=41.2
Q ss_pred hhhcccccCCCCCe--EEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 160 DAYLTPIAGKRTNL--YVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 160 ~~~l~~~~~~~~n~--~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
..|+.... ++.++ +|+.+++|+++.++++.....|+.. +|+ +++++ .||+|.|+...|++.
T Consensus 90 ~~~l~~~~-~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~--~G~--~i~ad-~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 90 LEYLEDVV-DRFDLRRHFKFGTEVTSALYLDDENLWEVTTD--HGE--VYRAK-YVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHH-HHTTCGGGEEESCCEEEEEEETTTTEEEEEET--TSC--EEEEE-EEEECCCSCCSBCCC
T ss_pred HHHHHHHH-HHcCCcceeEeccEEEEEEEeCCCCEEEEEEc--CCC--EEEeC-EEEECCcccccCCCC
Confidence 35665544 45566 8999999999998833223334432 565 57884 799999988777654
No 118
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=48.34 E-value=38 Score=35.07 Aligned_cols=47 Identities=17% Similarity=0.228 Sum_probs=35.1
Q ss_pred EEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 175 VLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 175 v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
|+.+++|++|..+ ++.++ |++.+. +|+..+++| +.||.|.|+-...|
T Consensus 152 v~~~~~v~~~~~~-~~~v~-v~~~~~~~G~~~~i~a-~~vVgADG~~S~vR 199 (549)
T 2r0c_A 152 LRTRSRLDSFEQR-DDHVR-ATITDLRTGATRAVHA-RYLVACDGASSPTR 199 (549)
T ss_dssp EECSEEEEEEEEC-SSCEE-EEEEETTTCCEEEEEE-EEEEECCCTTCHHH
T ss_pred cccCcEEEEEEEe-CCEEE-EEEEECCCCCEEEEEe-CEEEECCCCCcHHH
Confidence 9999999999887 44443 666653 477788999 57999999755443
No 119
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=48.23 E-value=23 Score=37.58 Aligned_cols=52 Identities=21% Similarity=0.222 Sum_probs=38.1
Q ss_pred CeEEEcCcEEEEEEecC--CCeEEEEEEEe----cCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 172 NLYVLKRSKVTKVIIND--QNVATGVEYVN----SKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~--~~~a~gV~~~~----~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
+++|+.+++|++|..++ ++..+.|++.+ .+|...+++| +.||.|.|+-.+.|
T Consensus 157 ~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a-~~vVgADG~~S~vR 214 (639)
T 2dkh_A 157 RLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQA-RYVVGCDGARSNVR 214 (639)
T ss_dssp CCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEE-EEEEECCCTTCHHH
T ss_pred CcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEe-CEEEECCCcchHHH
Confidence 66999999999998872 12334566665 3677788999 57999999754443
No 120
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=48.03 E-value=20 Score=36.30 Aligned_cols=52 Identities=17% Similarity=0.328 Sum_probs=37.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
++.++++++++.|++|..+ ++.+ .|++.+.+| ..++.++ .||+|.|..-+..
T Consensus 232 ~~~Gv~v~~~~~v~~i~~~-~~~~-~v~~~~~~g-~~~~~~D-~vi~a~G~~p~~~ 283 (476)
T 3lad_A 232 TKQGLKILLGARVTGTEVK-NKQV-TVKFVDAEG-EKSQAFD-KLIVAVGRRPVTT 283 (476)
T ss_dssp HHTTEEEEETCEEEEEEEC-SSCE-EEEEESSSE-EEEEEES-EEEECSCEEECCT
T ss_pred HhCCCEEEECCEEEEEEEc-CCEE-EEEEEeCCC-cEEEECC-EEEEeeCCcccCC
Confidence 5678999999999999876 4433 366665234 5678896 7999999764444
No 121
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=47.64 E-value=18 Score=37.92 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=38.0
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 221 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~ 221 (522)
..|...+ ...+++|+.+++|++|..+ ++.++ |++.+.+|+ .+++| +.||.|.|+-.
T Consensus 152 ~~L~~~a-~~~gv~i~~~~~v~~l~~~-~~~v~-v~~~~~~G~-~~~~a-~~vV~ADG~~S 207 (570)
T 3fmw_A 152 ALLAEHA-REAGAEIPRGHEVTRLRQD-AEAVE-VTVAGPSGP-YPVRA-RYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHH-HHHTEECCBSCEEEECCBC-SSCEE-EEEEETTEE-EEEEE-SEEEECSCSSC
T ss_pred HHHHHHH-HhCCCEEEeCCEEEEEEEc-CCeEE-EEEEeCCCc-EEEEe-CEEEEcCCCCc
Confidence 3443333 3458999999999999887 33333 666543553 67999 47999999743
No 122
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=47.29 E-value=11 Score=38.96 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=36.9
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
.+|...+ ...+++++.+ +|++|..++++.+++|+.. +|+ +++| +.||+|.|+-
T Consensus 169 ~~L~~~a-~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~--~g~--~i~a-d~vV~A~G~~ 221 (538)
T 2aqj_A 169 DFLKRWA-VERGVNRVVD-EVVDVRLNNRGYISNLLTK--EGR--TLEA-DLFIDCSGMR 221 (538)
T ss_dssp HHHHHHH-HHTTCEEEEC-CEEEEEECTTSCEEEEEET--TSC--EECC-SEEEECCGGG
T ss_pred HHHHHHH-HHCCCEEEEe-eEeEEEEcCCCcEEEEEEC--CCc--EEEe-CEEEECCCCc
Confidence 3443433 3568999999 8999988634556666653 464 6889 4799999963
No 123
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=46.98 E-value=11 Score=38.52 Aligned_cols=59 Identities=22% Similarity=0.177 Sum_probs=39.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH-HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL-LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L-Ll~SGi 231 (522)
++.+++++++++|++|..++++++..|++. +|+ .++.++ .||+|+|..-+..| |..+|+
T Consensus 237 ~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~--~G~-~~i~~D-~vv~a~G~~p~~~l~l~~~gl 296 (479)
T 2hqm_A 237 VKEGINVHKLSKIVKVEKNVETDKLKIHMN--DSK-SIDDVD-ELIWTIGRKSHLGMGSENVGI 296 (479)
T ss_dssp HHHTCEEECSCCEEEEEECC-CCCEEEEET--TSC-EEEEES-EEEECSCEEECCCSSGGGGTC
T ss_pred HhCCeEEEeCCEEEEEEEcCCCcEEEEEEC--CCc-EEEEcC-EEEECCCCCCccccChhhcCc
Confidence 467899999999999987523323445443 564 468895 79999997655544 444454
No 124
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=45.99 E-value=15 Score=37.95 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=35.9
Q ss_pred hhcccccCCC-CCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 161 AYLTPIAGKR-TNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 161 ~~l~~~~~~~-~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
.+|...+ .. .+++++.+ +|++|..++++.+++|+.. +|.+ ++|+ .||.|.|+
T Consensus 179 ~~L~~~a-~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~--~g~~--i~ad-~vV~AdG~ 231 (526)
T 2pyx_A 179 QLLTEHC-TQKLGVTHIRD-HVSQIINNQHGDIEKLITK--QNGE--ISGQ-LFIDCTGA 231 (526)
T ss_dssp HHHHHHH-HHTSCCEEEEC-CEEEEEECTTSCEEEEEES--SSCE--EECS-EEEECSGG
T ss_pred HHHHHHH-HhcCCCEEEEe-EEEEEEecCCCcEEEEEEC--CCCE--EEcC-EEEECCCc
Confidence 4444433 34 78999999 5999988734556666553 4553 8894 79999996
No 125
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.42 E-value=15 Score=37.13 Aligned_cols=53 Identities=23% Similarity=0.292 Sum_probs=38.7
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL 225 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L 225 (522)
++.+++++++++|++|..+ ++. ..|++.+ +|...++.++ .||+|.|..-+..+
T Consensus 222 ~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~-~g~~~~~~~D-~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 222 KKKGVEVVTNALAKGAEER-EDG-VTVTYEA-NGETKTIDAD-YVLVTVGRRPNTDE 274 (455)
T ss_dssp HHTTCEEEESEEEEEEEEE-TTE-EEEEEEE-TTEEEEEEES-EEEECSCEEESCSS
T ss_pred HHCCCEEEeCCEEEEEEEe-CCe-EEEEEEe-CCceeEEEcC-EEEECcCCCcccCc
Confidence 4678999999999999876 333 3455543 5556678995 79999997655544
No 126
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=44.95 E-value=17 Score=36.97 Aligned_cols=55 Identities=15% Similarity=0.157 Sum_probs=38.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeE--EEEEeCcEEEEcCcchhhhH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGET--VRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~--~~v~A~k~VILaaGai~Tp~ 224 (522)
++.++++++++.|++|..++++....|++.+. +|+. .++.++ .||+|.|..-+..
T Consensus 239 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D-~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 239 ENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVD-CLLWAIGRVPNTK 296 (478)
T ss_dssp HHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEES-EEEECSCEEESCT
T ss_pred HHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcC-EEEEeeccccCCC
Confidence 56789999999999998763342334555542 2443 678996 7999999765444
No 127
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=43.79 E-value=7.1 Score=39.62 Aligned_cols=51 Identities=18% Similarity=0.276 Sum_probs=36.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL 225 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L 225 (522)
++.++++++++.|++|..+ ++.+..|++ ..+|+ +.++ .||+|+|..-+..+
T Consensus 222 ~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~-~~~g~---i~aD-~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 222 EEKGIRILCEDIIQSVSAD-ADGRRVATT-MKHGE---IVAD-QVMLALGRMPNTNG 272 (463)
T ss_dssp HHTTCEEECSCCEEEEEEC-TTSCEEEEE-SSSCE---EEES-EEEECSCEEESCTT
T ss_pred HHCCCEEECCCEEEEEEEc-CCCEEEEEE-cCCCe---EEeC-EEEEeeCcccCCCC
Confidence 5778999999999999886 332334442 22564 8895 79999997655554
No 128
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=43.34 E-value=45 Score=37.64 Aligned_cols=60 Identities=22% Similarity=0.262 Sum_probs=44.2
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEe----cC-------CeEEEEEeCcEEEEcCcch-hhhHHHHH-hCC
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVN----SK-------GETVRVTANKEVILTAGAI-ANAQLLLL-SGI 231 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~----~~-------g~~~~v~A~k~VILaaGai-~Tp~LLl~-SGi 231 (522)
..+++++.++.+++|..+ ++++++|++.+ .+ |++.++.++ .||+|.|.. .+..|+.. +|+
T Consensus 382 ~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD-~Vi~A~G~~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 382 EEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKAD-VVISAFGSVLRDPKVKEALSPI 454 (1025)
T ss_dssp HTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECS-EEEECSCEECCCHHHHHHTTTS
T ss_pred HcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCCCceEEEECC-EEEECCCCCCCchhhhhcccCc
Confidence 568999999999999775 67888888752 12 345678995 799999985 45666654 455
No 129
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=43.10 E-value=6.7 Score=40.96 Aligned_cols=61 Identities=26% Similarity=0.421 Sum_probs=40.7
Q ss_pred hhhcccccCCCCCe--EEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 160 DAYLTPIAGKRTNL--YVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 160 ~~~l~~~~~~~~n~--~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
..|+.... ++.++ +++.+++|+++.+++......|+.. +|+ +++++ .||+|.|....|++.
T Consensus 102 ~~yl~~~~-~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~--~G~--~i~ad-~lV~AtG~~s~p~~p 164 (549)
T 4ap3_A 102 LAYLEHVA-DRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTD--RGD--EVSAR-FLVVAAGPLSNANTP 164 (549)
T ss_dssp HHHHHHHH-HHTTCGGGEECSCCEEEEEEETTTTEEEEEET--TCC--EEEEE-EEEECCCSEEECCCC
T ss_pred HHHHHHHH-HHcCCCccEEECCEEEEEEEcCCCCEEEEEEC--CCC--EEEeC-EEEECcCCCCCCCCC
Confidence 35665544 45556 7899999999998833223334432 565 47884 799999987777654
No 130
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=42.63 E-value=11 Score=38.27 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=39.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQL 225 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~L 225 (522)
++.+++++++++|++|..+ ++. ..|++.+. +|+..++.++ .||+|+|..-+..+
T Consensus 229 ~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 229 EKQGMKFKLKTKVVGVDTS-GDG-VKLTVEPSAGGEQTIIEAD-VVLVSAGRTPFTSG 283 (470)
T ss_dssp HHSSCCEECSEEEEEEECS-SSS-EEEEEEESSSCCCEEEEES-EEECCCCEEECCTT
T ss_pred HHcCCEEEeCCEEEEEEEc-CCe-EEEEEEecCCCcceEEECC-EEEECCCCCcCCCC
Confidence 5678999999999999876 333 34555532 4555678996 79999998766555
No 131
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=42.20 E-value=18 Score=37.22 Aligned_cols=44 Identities=20% Similarity=0.100 Sum_probs=31.3
Q ss_pred ccCCCCceeCcCCceEe-cccCCCCCCCchhHHHHHHHHHHHHHHHhh
Q psy14407 470 VVTPDLKVKGIKGLRVA-DISVLPNAIITQSDAISYMIGEKCADLVKT 516 (522)
Q Consensus 470 VVD~~~rv~g~~NL~V~-DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~ 516 (522)
+||+++|+-+++|+|++ |++..|..+.+. .++.-|..+|+.|.+
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDK 398 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHH
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHH
Confidence 69999999999999987 666777555433 244555666666643
No 132
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=42.09 E-value=27 Score=35.04 Aligned_cols=55 Identities=9% Similarity=0.058 Sum_probs=38.7
Q ss_pred cccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 163 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 163 l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+...+ ++.++++++++.|++|..+ ++++ .|+. + +| ++.++ .||+|.|..-+..+|
T Consensus 195 l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v-~v~~-~-~g---~i~aD-~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 195 VQKSL-EKQAVIFHFEETVLGIEET-ANGI-VLET-S-EQ---EISCD-SGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHH-HTTTEEEEETCCEEEEEEC-SSCE-EEEE-S-SC---EEEES-EEEECSCCBCCCSSC
T ss_pred HHHHH-HHcCCEEEeCCEEEEEEcc-CCeE-EEEE-C-CC---EEEeC-EEEECcCCCCChHHH
Confidence 33344 5789999999999999866 4455 4544 2 34 68895 799999976555443
No 133
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=42.09 E-value=20 Score=34.38 Aligned_cols=48 Identities=21% Similarity=0.183 Sum_probs=34.2
Q ss_pred CeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 172 NLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+.+|+.+++|++|..+ ++.+ ++...+|+. +.++ .||+|..+-...+||
T Consensus 123 g~~i~~~~~V~~i~~~-~~~~---~v~~~~g~~--~~ad-~vV~A~p~~~~~~ll 170 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLR-DDKW---EVSKQTGSP--EQFD-LIVLTMPVPEILQLQ 170 (342)
T ss_dssp TCEEESSCCEEEEEEC-SSSE---EEEESSSCC--EEES-EEEECSCHHHHTTCB
T ss_pred CCEEEeCCEEEEEEEc-CCEE---EEEECCCCE--EEcC-EEEECCCHHHHHHHh
Confidence 6899999999999987 4433 333324653 5784 799999876666655
No 134
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=42.04 E-value=42 Score=37.54 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=46.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEe--c---CCeEEEEEeCcEEEEcCcchhhhHHHHHhC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVN--S---KGETVRVTANKEVILTAGAIANAQLLLLSG 230 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~--~---~g~~~~v~A~k~VILaaGai~Tp~LLl~SG 230 (522)
+..+++|++++.|++|.-++++++.+|++.+ . +|+..++.++ .||+|.|..-+..||...+
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred HhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 3578999999999999763135678888875 2 2556789996 7999999877777776554
No 135
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=41.31 E-value=8.7 Score=40.04 Aligned_cols=62 Identities=16% Similarity=0.125 Sum_probs=38.5
Q ss_pred hhhcccccCCCCCe--EEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 160 DAYLTPIAGKRTNL--YVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 160 ~~~l~~~~~~~~n~--~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
..|+.... ++.++ .++.+++|+++.+++......|++. +|+ +++++ .||+|.|....|++.-
T Consensus 90 ~~yl~~~~-~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~--~G~--~~~ad-~lV~AtG~~s~p~~p~ 153 (545)
T 3uox_A 90 LRYVNRAA-DAMDVRKHYRFNTRVTAARYVENDRLWEVTLD--NEE--VVTCR-FLISATGPLSASRMPD 153 (545)
T ss_dssp HHHHHHHH-HHHTCGGGEECSCCEEEEEEEGGGTEEEEEET--TTE--EEEEE-EEEECCCSCBC---CC
T ss_pred HHHHHHHH-HHcCCcCcEEECCEEEEEEEeCCCCEEEEEEC--CCC--EEEeC-EEEECcCCCCCCcCCC
Confidence 35555444 44445 7888999999998722223334332 565 57884 7999999888887653
No 136
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=41.16 E-value=17 Score=36.03 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=30.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
+..+ +|++++.|++|..+ ++.++ |++ .+|+ +++|+ .||+|+|.
T Consensus 215 ~~~g-~i~~~~~V~~i~~~-~~~v~-v~~--~~g~--~~~ad-~vi~a~~~ 257 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQS-GDVVN-VTV--KDGH--AFQAH-SVIVATPM 257 (431)
T ss_dssp TTCS-CEESSCCEEEEECS-SSSEE-EEE--TTSC--CEEEE-EEEECSCG
T ss_pred hhCC-ceEeCCEEEEEEEc-CCeEE-EEE--CCCC--EEEeC-EEEEecCc
Confidence 4455 99999999999887 44332 433 2565 57885 69999974
No 137
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=40.90 E-value=9.8 Score=38.95 Aligned_cols=57 Identities=23% Similarity=0.357 Sum_probs=38.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH-H-HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-L-LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~-L-Ll~SGi 231 (522)
.+.++++++++.|++|..++++ ...|++. +|+ ++.++ .||+|+|..-... | |..+|+
T Consensus 242 ~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~--~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 242 RANGINVRTHENPAKVTKNADG-TRHVVFE--SGA--EADYD-VVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HHTTEEEEETCCEEEEEECTTS-CEEEEET--TSC--EEEES-EEEECSCEEESCTTSCGGGGTC
T ss_pred HhCCCEEEeCCEEEEEEEcCCC-EEEEEEC--CCc--EEEcC-EEEEccCCCcCccccCchhcCc
Confidence 5679999999999999876222 2344432 565 68895 7999999764443 3 334444
No 138
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=40.79 E-value=40 Score=33.62 Aligned_cols=47 Identities=32% Similarity=0.293 Sum_probs=33.9
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+|+.++.|++|..+ ++. |.+...+|+ ++.|+ .||+|+.+-...+||
T Consensus 248 ~~i~~~~~V~~i~~~-~~~---~~v~~~~g~--~~~ad-~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHS-GSC---YSLELDNGV--TLDAD-SVIVTAPHKAAAGML 294 (470)
T ss_dssp EEEECSCCEEEEEEC-SSS---EEEEESSSC--EEEES-EEEECSCHHHHHHHT
T ss_pred CEEEeCCceEEEEEc-CCe---EEEEECCCC--EEECC-EEEECCCHHHHHHHc
Confidence 799999999999987 333 333333565 47885 699999876666654
No 139
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=40.52 E-value=23 Score=33.31 Aligned_cols=59 Identities=15% Similarity=0.030 Sum_probs=38.1
Q ss_pred hhhhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh-hhHH
Q psy14407 159 ADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA-NAQL 225 (522)
Q Consensus 159 ~~~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~-Tp~L 225 (522)
...|+...+ .+.+++++.+++|++|..+ ++....|+.. +|+ +.++ .||||.|+-. .|+.
T Consensus 69 ~~~~~~~~~-~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~--~g~---~~~d-~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 69 LINNLKEQM-AKFDQTICLEQAVESVEKQ-ADGVFKLVTN--EET---HYSK-TVIITAGNGAFKPRK 128 (332)
T ss_dssp HHHHHHHHH-TTSCCEEECSCCEEEEEEC-TTSCEEEEES--SEE---EEEE-EEEECCTTSCCEECC
T ss_pred HHHHHHHHH-HHhCCcEEccCEEEEEEEC-CCCcEEEEEC--CCE---EEeC-EEEECCCCCcCCCCC
Confidence 345565555 5678999999999999887 3212223322 343 7884 7999999832 4443
No 140
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=40.44 E-value=15 Score=36.40 Aligned_cols=53 Identities=23% Similarity=0.300 Sum_probs=40.8
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
++.++++++++.|++|. + + +|++. +|+ ++.++ .||+|.|..-+..+|..+|+.
T Consensus 198 ~~~GV~i~~~~~v~~i~-~-~----~v~~~--~g~--~i~~D-~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 198 AAQGVDLRFERSVTGSV-D-G----VVLLD--DGT--RIAAD-MVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHTTCEEEESCCEEEEE-T-T----EEEET--TSC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHcCcEEEeCCEEEEEE-C-C----EEEEC--CCC--EEEcC-EEEECcCCCccHHHHHhCCCC
Confidence 56789999999999998 5 4 44443 564 57885 799999988776788777764
No 141
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=40.31 E-value=39 Score=34.20 Aligned_cols=44 Identities=16% Similarity=0.140 Sum_probs=30.9
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
..|++|+.+++|++|..+ ++. |.+...+|+ +++|+ .||+|+|.-
T Consensus 268 ~g~~~i~~~~~V~~i~~~-~~~---v~v~~~~g~--~~~ad-~vI~a~~~~ 311 (495)
T 2vvm_A 268 TGRLGYVFGCPVRSVVNE-RDA---ARVTARDGR--EFVAK-RVVCTIPLN 311 (495)
T ss_dssp TTCEEEESSCCEEEEEEC-SSS---EEEEETTCC--EEEEE-EEEECCCGG
T ss_pred cCceEEEeCCEEEEEEEc-CCE---EEEEECCCC--EEEcC-EEEECCCHH
Confidence 334999999999999887 333 233332564 57884 799999963
No 142
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=40.10 E-value=11 Score=38.74 Aligned_cols=50 Identities=16% Similarity=0.358 Sum_probs=36.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
+..+++++++++|++|..+ ++....|++. +|+ ++.++ .||+|+|..-+..
T Consensus 246 ~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~--~G~--~i~~D-~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLN-TDGSKHVTFE--SGK--TLDVD-VVMMAIGRIPRTN 295 (495)
T ss_dssp HHTTCEEEESCCEEEEEEC-TTSCEEEEET--TSC--EEEES-EEEECSCEEECCG
T ss_pred HhCCCEEEeCCEEEEEEEc-CCceEEEEEC--CCc--EEEcC-EEEECCCCccccc
Confidence 4678999999999999876 3223345443 565 68895 7999999765544
No 143
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=38.46 E-value=21 Score=36.59 Aligned_cols=61 Identities=15% Similarity=0.025 Sum_probs=46.5
Q ss_pred CCcccccccccCCCCCCcccCCCCceeCcCCceEecc---cCC-CCCCCchhHHHHHHHHHHHHHHHhhh
Q psy14407 452 TSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADI---SVL-PNAIITQSDAISYMIGEKCADLVKTS 517 (522)
Q Consensus 452 ~~H~~Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~Da---Sv~-P~~~~~NPtlTi~Ala~r~Ad~i~~~ 517 (522)
..|-+|+.+.-.+ .-|+|.++++ ++|||.|+. +++ ..-+++|.....+..+.++++.+++.
T Consensus 445 ~~~t~GGl~~d~~---~~Vl~~~g~~--I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~~ 509 (510)
T 4at0_A 445 LGFTLGGLRTTVN---SEVLHVSGEP--IPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAKQ 509 (510)
T ss_dssp EEEECCEECBCTT---CEEEBTTSSE--EEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccCcCeeECCC---CceECCCCCC--cCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHhc
Confidence 4567888887654 3899999887 899999974 555 23346788888899999999988753
No 144
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=38.00 E-value=19 Score=34.72 Aligned_cols=54 Identities=15% Similarity=0.258 Sum_probs=35.8
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhh
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANA 223 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp 223 (522)
.|+...+ ++.+++++.++.|++|..+ ++. +.+...+| ++.+ +.||||+|+...|
T Consensus 92 ~~l~~~~-~~~gv~i~~~~~v~~i~~~-~~~---~~v~~~~g---~~~~-d~vVlAtG~~~~p 145 (369)
T 3d1c_A 92 EYLQVVA-NHYELNIFENTVVTNISAD-DAY---YTIATTTE---TYHA-DYIFVATGDYNFP 145 (369)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEEC-SSS---EEEEESSC---CEEE-EEEEECCCSTTSB
T ss_pred HHHHHHH-HHcCCeEEeCCEEEEEEEC-CCe---EEEEeCCC---EEEe-CEEEECCCCCCcc
Confidence 4554443 4668999999999999887 322 22233234 4778 4799999986544
No 145
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=37.06 E-value=22 Score=36.94 Aligned_cols=47 Identities=15% Similarity=0.311 Sum_probs=33.5
Q ss_pred hhhhcccccCCCCCeEEEc--CcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 159 ADAYLTPIAGKRTNLYVLK--RSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 159 ~~~~l~~~~~~~~n~~v~~--~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
...|+ +++ .++|++|+. .+.|++|..+ ||+.. +| ++.++ .||+|+|-
T Consensus 341 ~~~y~-~al-~~~nV~lv~~~~~~I~~it~~------gv~~~--dG---~~~~D-~IV~ATGf 389 (545)
T 3uox_A 341 ETNYY-ETY-NRDNVHLVDIREAPIQEVTPE------GIKTA--DA---AYDLD-VIIYATGF 389 (545)
T ss_dssp ESSHH-HHT-TSTTEEEEETTTSCEEEEETT------EEEES--SC---EEECS-EEEECCCC
T ss_pred CccHH-HHh-cCCCEEEEecCCCCceEEccC------eEEeC--CC---eeecC-EEEECCcc
Confidence 44566 556 799999996 7888888554 45443 46 57885 79999994
No 146
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=37.05 E-value=17 Score=36.88 Aligned_cols=57 Identities=25% Similarity=0.214 Sum_probs=39.1
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH-HHHhCC
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL-LLLSGI 231 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L-Ll~SGi 231 (522)
+++++++.|++|..++.+.+ .|++.+.+|+..++.++ .||+|.|..-+..| |..+|+
T Consensus 226 v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D-~vi~a~G~~p~~~l~l~~~gl 283 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTN-SVVLAAGRRPVIPEGAREIGL 283 (466)
T ss_dssp CCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEES-CEEECCCEEECCCTTTGGGTC
T ss_pred EEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcC-EEEECcCCCcccccchhhcCc
Confidence 89999999999987621433 25444325777789996 69999997655544 444554
No 147
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=37.04 E-value=15 Score=37.52 Aligned_cols=50 Identities=14% Similarity=0.235 Sum_probs=35.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL 225 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L 225 (522)
++.++++++++.|++|..+ ++++ .+...+|+ ++.++ .||+|+|..-+..+
T Consensus 234 ~~~GV~i~~~~~V~~i~~~-~~~v---~v~~~~g~--~i~aD-~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 234 AERGVRLFKNARAASVTRT-GAGV---LVTMTDGR--TVEGS-HALMTIGSVPNTSG 283 (499)
T ss_dssp HHTTCEEETTCCEEEEEEC-SSSE---EEEETTSC--EEEES-EEEECCCEEECCSS
T ss_pred HHCCCEEEeCCEEEEEEEe-CCEE---EEEECCCc--EEEcC-EEEECCCCCcCCCc
Confidence 5679999999999999876 4332 33332454 57885 79999998755555
No 148
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=36.91 E-value=19 Score=36.64 Aligned_cols=40 Identities=18% Similarity=0.053 Sum_probs=22.3
Q ss_pred CceeCcCCceEecccCCCCCCCchhHHHHHHHHHHHHHHHhhhc
Q psy14407 475 LKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSY 518 (522)
Q Consensus 475 ~rv~g~~NL~V~DaSv~P~~~~~NPtlTi~Ala~r~Ad~i~~~~ 518 (522)
.+.-.++|||.|++|++|.. ++. .++.=+..+|+.|++++
T Consensus 452 ~~~t~i~gLyl~G~~t~pG~-Gv~---ga~~SG~~aA~~il~dL 491 (501)
T 4dgk_A 452 NRDKTITNLYLVGAGTHPGA-GIP---GVIGSAKATAGLMLEDL 491 (501)
T ss_dssp ----CCTTEEECCCH-------HH---HHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEECCCCCCcc-cHH---HHHHHHHHHHHHHHHHh
Confidence 34456899999999999853 222 12223788999998876
No 149
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=36.81 E-value=14 Score=36.58 Aligned_cols=42 Identities=7% Similarity=0.063 Sum_probs=29.9
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhh
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~T 222 (522)
.+|++++.|++|..+ ++++. |+. .+|+ ++|+ .||+|+++-..
T Consensus 218 ~~v~~~~~V~~i~~~-~~~v~-v~~--~~g~---~~ad-~Vv~a~~~~~~ 259 (424)
T 2b9w_A 218 HPAERNVDITRITRE-DGKVH-IHT--TDWD---RESD-VLVLTVPLEKF 259 (424)
T ss_dssp SCCBCSCCEEEEECC-TTCEE-EEE--SSCE---EEES-EEEECSCHHHH
T ss_pred ceEEcCCEEEEEEEE-CCEEE-EEE--CCCe---EEcC-EEEECCCHHHH
Confidence 478999999999887 44443 433 2453 7895 79999998543
No 150
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=36.76 E-value=10 Score=38.74 Aligned_cols=53 Identities=11% Similarity=-0.004 Sum_probs=35.9
Q ss_pred eEEEcCcEEEEEEecCCCe----EEEEEEEecCCeE-EEEEeCcEEEEcCcchhhhHHH
Q psy14407 173 LYVLKRSKVTKVIINDQNV----ATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~----a~gV~~~~~~g~~-~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+|++++.|++|..++++. .+.|.+.+.+|.. .+++|+ .||+++..-...+||
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad-~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFD-AVIMTAPLCDVKSMK 313 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEES-EEEECSCHHHHHTSE
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECC-EEEECCCHHHHHHHh
Confidence 5799999999999872221 3567665434533 467885 699998865555544
No 151
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=36.32 E-value=25 Score=35.39 Aligned_cols=46 Identities=17% Similarity=0.095 Sum_probs=34.4
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+|++++.|++|..+ ++. |.+...+| ++.|+ .||+|+++-...+||
T Consensus 249 ~~i~~~~~V~~i~~~-~~~---~~v~~~~g---~~~ad-~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 249 SEIRLETPLLAISRE-DGR---YRLKTDHG---PEYAD-YVLLTIPHPQVVQLL 294 (475)
T ss_dssp CEEESSCCCCEEEEE-TTE---EEEECTTC---CEEES-EEEECSCHHHHHHHC
T ss_pred CEEEcCCeeeEEEEe-CCE---EEEEECCC---eEECC-EEEECCCHHHHHHHc
Confidence 689999999999887 443 34443356 58895 799999987666665
No 152
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=36.19 E-value=34 Score=35.43 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=41.5
Q ss_pred CCCCeEEEcCcEEEEEEec------------------CCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhC
Q psy14407 169 KRTNLYVLKRSKVTKVIIN------------------DQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSG 230 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~------------------~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SG 230 (522)
++.++++++++.|++|..+ +++++. |.. .+|+ ++.++ .||+|.|..-+..||..+|
T Consensus 203 ~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~--~~g~--~i~~D-~vi~a~G~~p~~~l~~~~g 276 (565)
T 3ntd_A 203 RDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTL--SNGE--LLETD-LLIMAIGVRPETQLARDAG 276 (565)
T ss_dssp HHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEE--TTSC--EEEES-EEEECSCEEECCHHHHHHT
T ss_pred HHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEE--cCCC--EEEcC-EEEECcCCccchHHHHhCC
Confidence 5679999999999999772 133332 322 2565 68895 7999999887777777777
Q ss_pred CC
Q psy14407 231 IG 232 (522)
Q Consensus 231 ig 232 (522)
+.
T Consensus 277 ~~ 278 (565)
T 3ntd_A 277 LA 278 (565)
T ss_dssp CC
T ss_pred cc
Confidence 63
No 153
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=36.17 E-value=30 Score=35.16 Aligned_cols=56 Identities=21% Similarity=0.377 Sum_probs=39.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHH--HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~L--Ll~SGi 231 (522)
.+.++++++++.|++|..+ ++++ .|++. +|+ ++.++ .||+|.|..-...+ |...|+
T Consensus 243 ~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~--~g~--~i~aD-~Vi~A~G~~p~~~~l~l~~~g~ 300 (484)
T 3o0h_A 243 VAKGISIIYEATVSQVQST-ENCY-NVVLT--NGQ--TICAD-RVMLATGRVPNTTGLGLERAGV 300 (484)
T ss_dssp HHHTCEEESSCCEEEEEEC-SSSE-EEEET--TSC--EEEES-EEEECCCEEECCTTCCHHHHTC
T ss_pred HHCCCEEEeCCEEEEEEee-CCEE-EEEEC--CCc--EEEcC-EEEEeeCCCcCCCCCChhhcCc
Confidence 4678999999999999886 4443 44433 464 57885 79999997666555 455555
No 154
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=35.89 E-value=14 Score=37.30 Aligned_cols=57 Identities=16% Similarity=0.207 Sum_probs=39.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH-H-HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-L-LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~-L-Ll~SGi 231 (522)
+..+++++++++|++|..++++ ...|++. +|+ ++.++ .||+|+|.--+.. | |..+|+
T Consensus 219 ~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~--~g~--~i~~D-~vv~a~G~~p~~~~l~~~~~gl 277 (450)
T 1ges_A 219 NAEGPQLHTNAIPKAVVKNTDG-SLTLELE--DGR--SETVD-CLIWAIGREPANDNINLEAAGV 277 (450)
T ss_dssp HHHSCEEECSCCEEEEEECTTS-CEEEEET--TSC--EEEES-EEEECSCEEESCTTSCHHHHTC
T ss_pred HHCCCEEEeCCEEEEEEEeCCc-EEEEEEC--CCc--EEEcC-EEEECCCCCcCCCCCCchhcCc
Confidence 4678999999999999876223 2334432 565 67885 7999999765544 3 455565
No 155
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=35.86 E-value=15 Score=37.00 Aligned_cols=51 Identities=20% Similarity=0.234 Sum_probs=38.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
++.+++++++++|++|..+ ++++..|+. +|+ ++.++ .||+|+|..-+..+|
T Consensus 202 ~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~---~g~--~i~~D-~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 202 EAHGVNLVLGSKVAAFEEV-DDEIITKTL---DGK--EIKSD-IAILCIGFRPNTELL 252 (452)
T ss_dssp HHTTCEEEESSCEEEEEEE-TTEEEEEET---TSC--EEEES-EEEECCCEEECCGGG
T ss_pred HHCCCEEEcCCeeEEEEcC-CCeEEEEEe---CCC--EEECC-EEEECcCCCCCHHHH
Confidence 5679999999999999864 455655542 454 57885 799999987666554
No 156
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=35.42 E-value=30 Score=34.43 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=39.9
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHH
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLL 228 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~ 228 (522)
..+...+ ++.++++++++.|++|.-+ +|++.+.+++..++.++ .||++.|....+ .|..
T Consensus 204 ~~l~~~l-~~~GV~i~~~~~v~~v~~~------~v~~~~~~~~g~~i~~D-~vv~a~G~~~~~-~l~~ 262 (430)
T 3h28_A 204 RLVEDLF-AERNIDWIANVAVKAIEPD------KVIYEDLNGNTHEVPAK-FTMFMPSFQGPE-VVAS 262 (430)
T ss_dssp HHHHHHH-HHTTCEEECSCEEEEECSS------EEEEECTTSCEEEEECS-EEEEECEEECCH-HHHT
T ss_pred HHHHHHH-HHCCCEEEeCCEEEEEeCC------eEEEEecCCCceEEeee-EEEECCCCccch-hHhh
Confidence 3444444 5789999999999998543 24455434556788995 799999976544 4443
No 157
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=34.45 E-value=62 Score=32.60 Aligned_cols=52 Identities=12% Similarity=0.125 Sum_probs=40.0
Q ss_pred CCeEEEcCcEEEEEEecCCC-eEEEEEEEec-------------CCeEEEEEeCcEEEEcCcchhhh
Q psy14407 171 TNLYVLKRSKVTKVIINDQN-VATGVEYVNS-------------KGETVRVTANKEVILTAGAIANA 223 (522)
Q Consensus 171 ~n~~v~~~~~V~~I~~~~~~-~a~gV~~~~~-------------~g~~~~v~A~k~VILaaGai~Tp 223 (522)
.++++++++.+++|.-++.+ ++.+|++.+. +|+..++.++ .||+|.|.-.++
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 78999999999998765225 7888887531 3556789995 799999977666
No 158
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=34.13 E-value=38 Score=36.25 Aligned_cols=53 Identities=11% Similarity=0.135 Sum_probs=38.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLL 228 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl~ 228 (522)
.+.+++|+++++|++|..+ + +.+... ++...++.++ .||+|+|..-+..|+..
T Consensus 578 ~~~GV~i~~~~~V~~i~~~-~-----~~v~~~~~~~~~~i~aD-~VV~A~G~~p~~~l~~~ 631 (690)
T 3k30_A 578 IENGVARVTDHAVVAVGAG-G-----VTVRDTYASIERELECD-AVVMVTARLPREELYLD 631 (690)
T ss_dssp HHTTCEEEESEEEEEEETT-E-----EEEEETTTCCEEEEECS-EEEEESCEEECCHHHHH
T ss_pred HHCCCEEEcCcEEEEEECC-e-----EEEEEccCCeEEEEECC-EEEECCCCCCChHHHHH
Confidence 5679999999999998654 2 223321 4566788996 79999998766666543
No 159
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=33.99 E-value=31 Score=34.82 Aligned_cols=57 Identities=19% Similarity=0.161 Sum_probs=39.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH-H-HHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-L-LLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~-L-Ll~SGi 231 (522)
...+++++++++|++|..+ ++. ..|++. +|+. ++.++ .||+|.|..-... | |..+|+
T Consensus 218 ~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~--~G~~-~i~~D-~vv~a~G~~p~~~~l~~~~~g~ 276 (463)
T 2r9z_A 218 HAQGIETHLEFAVAALERD-AQG-TTLVAQ--DGTR-LEGFD-SVIWAVGRAPNTRDLGLEAAGI 276 (463)
T ss_dssp HHTTCEEESSCCEEEEEEE-TTE-EEEEET--TCCE-EEEES-EEEECSCEEESCTTSCHHHHTC
T ss_pred HHCCCEEEeCCEEEEEEEe-CCe-EEEEEe--CCcE-EEEcC-EEEECCCCCcCCCCCCchhcCC
Confidence 4678999999999999876 332 334432 5764 78895 7999999764443 3 445555
No 160
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=32.54 E-value=32 Score=34.67 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=29.8
Q ss_pred CeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 172 NLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
+.+|++++.|++|..+ ++.++ |++ .+|+ +++|+ .||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~-~~~v~-v~~--~~g~--~~~ad-~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYS-PGGVT-VKT--EDNS--VYSAD-YVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEEC-SSCEE-EEE--TTSC--EEEES-EEEECSCH
T ss_pred ccEEEcCCEEEEEEEc-CCcEE-EEE--CCCC--EEEcC-EEEEecCH
Confidence 5689999999999887 44443 433 2565 47885 79999984
No 161
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=32.31 E-value=48 Score=32.96 Aligned_cols=50 Identities=8% Similarity=0.046 Sum_probs=32.6
Q ss_pred cccCCCCceeCcCCceEe-cccCCCCCC-----Cchh-HH-HHHHHHHHHHHHHhhhc
Q psy14407 469 AVVTPDLKVKGIKGLRVA-DISVLPNAI-----ITQS-DA-ISYMIGEKCADLVKTSY 518 (522)
Q Consensus 469 ~VVD~~~rv~g~~NL~V~-DaSv~P~~~-----~~NP-tl-Ti~Ala~r~Ad~i~~~~ 518 (522)
=+||+.+|+-+++|+|++ |++.+|... ...| +. .+..-|.-+|+.|+..+
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l 332 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHh
Confidence 378899999999999987 566677432 2223 22 34455666777776543
No 162
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=32.19 E-value=28 Score=35.53 Aligned_cols=56 Identities=14% Similarity=0.156 Sum_probs=41.3
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
++.++++++++.|++|.-+ + ++.+|+.. +|+ ++.++ .||+|+|..-+..||..+|+
T Consensus 268 ~~~GV~v~~~~~v~~i~~~-~-~v~~v~~~--~g~--~i~aD-~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 268 ERWGIDYVHIPNVKRVEGN-E-KVERVIDM--NNH--EYKVD-ALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHTCEEEECSSEEEEECS-S-SCCEEEET--TCC--EEECS-EEEECCCEEECCHHHHHTTC
T ss_pred HhCCcEEEeCCeeEEEecC-C-ceEEEEeC--CCe--EEEeC-EEEECCCcCcCchHHHhcCC
Confidence 4568999999999999765 3 34555522 453 58885 79999998877778877765
No 163
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=32.10 E-value=83 Score=30.78 Aligned_cols=53 Identities=11% Similarity=0.041 Sum_probs=37.8
Q ss_pred CCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 171 TNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 171 ~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
++.+|+.+++|++|..+ ++ + .|.+.+. +|+..++++ +.||.|.|+-...|=++
T Consensus 122 g~~~v~~~~~v~~i~~~-~~-v-~v~~~~~~~g~~~~~~a-d~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 122 GQQAVRTGLGVERIEER-DG-R-VLIGARDGHGKPQALGA-DVLVGADGIHSAVRAHL 175 (410)
T ss_dssp CTTSEEESEEEEEEEEE-TT-E-EEEEEEETTSCEEEEEE-SEEEECCCTTCHHHHHH
T ss_pred CCcEEEECCEEEEEecC-Cc-c-EEEEecCCCCCceEEec-CEEEECCCccchhHHHh
Confidence 34689999999999873 44 3 3555542 476678999 58999999876665544
No 164
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=31.84 E-value=25 Score=36.71 Aligned_cols=55 Identities=18% Similarity=0.234 Sum_probs=41.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
++.++++++++.|++|..+ ++ +|++. +|+ ++.++ .||+|.|..-+..+|..+|+.
T Consensus 239 ~~~GV~i~~~~~v~~i~~~-~~---~v~~~--~g~--~i~~D-~Vi~a~G~~p~~~~l~~~g~~ 293 (588)
T 3ics_A 239 KNHDVELVFEDGVDALEEN-GA---VVRLK--SGS--VIQTD-MLILAIGVQPESSLAKGAGLA 293 (588)
T ss_dssp HHTTCEEECSCCEEEEEGG-GT---EEEET--TSC--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HHcCCEEEECCeEEEEecC-CC---EEEEC--CCC--EEEcC-EEEEccCCCCChHHHHhcCce
Confidence 5678999999999999765 33 34443 465 57885 799999988777777777763
No 165
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=31.67 E-value=28 Score=35.27 Aligned_cols=55 Identities=20% Similarity=0.252 Sum_probs=39.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
++.++++++++.|++|..+ +++..|.. ++. ++.++ .||+|+|..-++.+|..+|+
T Consensus 238 ~~~Gv~i~~~~~v~~i~~~--~~v~~v~~---~~~--~i~~D-~vi~a~G~~p~~~~l~~~g~ 292 (480)
T 3cgb_A 238 DKHHIEILTNENVKAFKGN--ERVEAVET---DKG--TYKAD-LVLVSVGVKPNTDFLEGTNI 292 (480)
T ss_dssp HHTTCEEECSCCEEEEEES--SBEEEEEE---TTE--EEECS-EEEECSCEEESCGGGTTSCC
T ss_pred HHcCcEEEcCCEEEEEEcC--CcEEEEEE---CCC--EEEcC-EEEECcCCCcChHHHHhCCc
Confidence 4678999999999999765 34544442 333 68895 79999998766666655554
No 166
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=30.91 E-value=33 Score=31.99 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=35.3
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEec-CCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIIN-DQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~-~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
.++...+ ++.+++++.+++|++|..+ +++....|.+. +|+ ++.+ +.||+|.|+-
T Consensus 60 ~~~~~~~-~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~--~g~--~~~~-~~lv~AtG~~ 114 (310)
T 1fl2_A 60 GALKVHV-DEYDVDVIDSQSASKLIPAAVEGGLHQIETA--SGA--VLKA-RSIIVATGAK 114 (310)
T ss_dssp HHHHHHH-HTSCEEEECSCCEEEEECCSSTTCCEEEEET--TSC--EEEE-EEEEECCCEE
T ss_pred HHHHHHH-HHcCCeEEccCEEEEEEecccCCceEEEEEC--CCC--EEEe-CEEEECcCCC
Confidence 4554444 5678999999999999775 21222333322 454 4778 4799999973
No 167
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=30.67 E-value=17 Score=37.18 Aligned_cols=50 Identities=14% Similarity=0.238 Sum_probs=35.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhh
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANA 223 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp 223 (522)
++.+++++++++|++|..++++. ..|++. +|++ ++.++ .||+|.|..-+.
T Consensus 228 ~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~--~g~~-~~~~D-~vi~a~G~~p~~ 277 (500)
T 1onf_A 228 KKNNINIVTFADVVEIKKVSDKN-LSIHLS--DGRI-YEHFD-HVIYCVGRSPDT 277 (500)
T ss_dssp HHTTCEEECSCCEEEEEESSTTC-EEEEET--TSCE-EEEES-EEEECCCBCCTT
T ss_pred HhCCCEEEECCEEEEEEEcCCce-EEEEEC--CCcE-EEECC-EEEECCCCCcCC
Confidence 46789999999999998752232 334432 5665 58895 799999976544
No 168
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=30.25 E-value=47 Score=31.30 Aligned_cols=57 Identities=21% Similarity=0.130 Sum_probs=35.9
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh-hhHH
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA-NAQL 225 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~-Tp~L 225 (522)
.++...+ .+.+++++.+++|++|..+ ++ .+++...+|. ++.+ +.||+|.|+-. .|+.
T Consensus 69 ~~l~~~~-~~~~~~~~~~~~v~~i~~~-~~---~~~v~~~~g~--~~~~-~~lv~AtG~~~~~p~~ 126 (335)
T 2zbw_A 69 KGLVEQV-APFNPVYSLGERAETLERE-GD---LFKVTTSQGN--AYTA-KAVIIAAGVGAFEPRR 126 (335)
T ss_dssp HHHHHHH-GGGCCEEEESCCEEEEEEE-TT---EEEEEETTSC--EEEE-EEEEECCTTSEEEECC
T ss_pred HHHHHHH-HHcCCEEEeCCEEEEEEEC-CC---EEEEEECCCC--EEEe-CEEEECCCCCCCCCCC
Confidence 3443333 4557899999999999887 33 2333332453 4778 47999999743 3443
No 169
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=29.17 E-value=60 Score=32.76 Aligned_cols=41 Identities=27% Similarity=0.212 Sum_probs=29.6
Q ss_pred EEEcCcEEEEEEecCCCeEEEEEEEecCCeE--EEEEeCcEEEEcCcc
Q psy14407 174 YVLKRSKVTKVIINDQNVATGVEYVNSKGET--VRVTANKEVILTAGA 219 (522)
Q Consensus 174 ~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~--~~v~A~k~VILaaGa 219 (522)
+|++++.|++|..+ ++++ .|.+.+ |+. .+++|+ .||++++.
T Consensus 254 ~i~~~~~V~~I~~~-~~~v-~v~~~~--~~~~~~~~~ad-~vI~t~p~ 296 (498)
T 2iid_A 254 KVHFNAQVIKIQQN-DQKV-TVVYET--LSKETPSVTAD-YVIVCTTS 296 (498)
T ss_dssp GEESSCEEEEEEEC-SSCE-EEEEEC--SSSCCCEEEES-EEEECSCH
T ss_pred ccccCCEEEEEEEC-CCeE-EEEEec--CCcccceEEeC-EEEECCCh
Confidence 79999999999987 4433 455554 432 367895 79999985
No 170
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=28.82 E-value=31 Score=35.31 Aligned_cols=51 Identities=20% Similarity=0.244 Sum_probs=34.9
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCe--EEEEEeCcEEEEcCcchhhhH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGE--TVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~--~~~v~A~k~VILaaGai~Tp~ 224 (522)
++.+++|++++.|++|.-+ +... .....+|+ ..+|.++ .||.|+|.-.+|.
T Consensus 283 ~~~GV~v~~~~~v~~v~~~--~~~~--~~~~~dg~~~~~~i~ad-~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 283 ENTSIKVHLRTAVAKVEEK--QLLA--KTKHEDGKITEETIPYG-TLIWATGNKARPV 335 (502)
T ss_dssp HHTTCEEETTEEEEEECSS--EEEE--EEECTTSCEEEEEEECS-EEEECCCEECCHH
T ss_pred HhcceeeecCceEEEEeCC--ceEE--EEEecCcccceeeeccC-EEEEccCCcCCHH
Confidence 5679999999999998543 2222 22222454 3679995 8999999766653
No 171
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=28.79 E-value=22 Score=36.80 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=34.0
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
.+|+.+++|+++.++++.....|+.. +|+ ++++ +.||+|.|+...|++.
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~w~V~~~--~G~--~~~a-d~vV~AtG~~s~p~~p 159 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNTWTVDTN--HGD--RIRA-RYLIMASGQLSVPQLP 159 (542)
T ss_dssp GGEECSCCEEEEEEETTTTEEEEEET--TCC--EEEE-EEEEECCCSCCCCCCC
T ss_pred ceEEcCcEEEEEEEcCCCCeEEEEEC--CCC--EEEe-CEEEECcCCCCCCCCC
Confidence 56888999999998722222334432 565 4788 4799999988777653
No 172
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=28.74 E-value=55 Score=31.95 Aligned_cols=51 Identities=14% Similarity=0.122 Sum_probs=35.6
Q ss_pred CCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHH
Q psy14407 171 TNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLL 228 (522)
Q Consensus 171 ~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~ 228 (522)
++++|+.+++|++|..+ ++.++ |++. +|+ ++++ +.||.|.|+-...|=++.
T Consensus 110 ~~~~i~~~~~v~~i~~~-~~~v~-v~~~--~g~--~~~a-d~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQD-SETVQ-MRFS--DGT--KAEA-NWVIGADGGASVVRKRLL 160 (397)
T ss_dssp CSTTEETTCCEEEEEEC-SSCEE-EEET--TSC--EEEE-SEEEECCCTTCHHHHHHH
T ss_pred CCcEEEcCCEEEEEEec-CCEEE-EEEC--CCC--EEEC-CEEEECCCcchhHHHHhc
Confidence 47899999999999887 33332 4332 565 5889 479999997655554443
No 173
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=28.38 E-value=28 Score=35.30 Aligned_cols=53 Identities=17% Similarity=0.232 Sum_probs=37.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecC--CeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSK--GETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~--g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
++.+++++++++|++|..+ ++ ...|++.+.+ |+ ++.++ .||+|.|..-+..+|
T Consensus 237 ~~~gV~i~~~~~v~~i~~~-~~-~~~v~~~~~~~~g~--~~~~D-~vv~a~G~~p~~~~l 291 (482)
T 1ojt_A 237 EYRFDNIMVNTKTVAVEPK-ED-GVYVTFEGANAPKE--PQRYD-AVLVAAGRAPNGKLI 291 (482)
T ss_dssp GGGEEEEECSCEEEEEEEE-TT-EEEEEEESSSCCSS--CEEES-CEEECCCEEECGGGT
T ss_pred HhcCCEEEECCEEEEEEEc-CC-eEEEEEeccCCCce--EEEcC-EEEECcCCCcCCCCC
Confidence 5678999999999999876 33 2445554311 43 46685 699999987666554
No 174
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=28.01 E-value=60 Score=32.62 Aligned_cols=46 Identities=17% Similarity=0.268 Sum_probs=32.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcc
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGA 219 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGa 219 (522)
++.+++++.+++|++|..+ ... |.+.+. +|...++.++ .+|||.|+
T Consensus 77 ~~~gi~~~~~~~V~~id~~-~~~---v~~~~~~~g~~~~~~~d-~lviAtG~ 123 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRA-AHT---VEIENLRTGERRTLKYD-KLVLALGS 123 (472)
T ss_dssp ----CEEECSEEEEEEETT-TTE---EEEEETTTCCEEEEECS-EEEECCCE
T ss_pred hhcCcEEEECCEEEEEECC-CCE---EEEeecCCCCEEEEECC-EEEEeCCC
Confidence 4578999999999999876 443 344432 4777788995 69999997
No 175
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=27.24 E-value=63 Score=30.00 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=32.7
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcch
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 220 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai 220 (522)
.++...+ .+.+++++. ++|++|..+ ++. +.+...+|. ++.++ .||||.|+-
T Consensus 74 ~~~~~~~-~~~~v~~~~-~~v~~i~~~-~~~---~~v~~~~g~--~~~~d-~lvlAtG~~ 124 (323)
T 3f8d_A 74 KVFNKHI-EKYEVPVLL-DIVEKIENR-GDE---FVVKTKRKG--EFKAD-SVILGIGVK 124 (323)
T ss_dssp HHHHHHH-HTTTCCEEE-SCEEEEEEC---C---EEEEESSSC--EEEEE-EEEECCCCE
T ss_pred HHHHHHH-HHcCCEEEE-EEEEEEEec-CCE---EEEEECCCC--EEEcC-EEEECcCCC
Confidence 4444444 567888988 999999886 332 223332444 56774 699999976
No 176
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=27.23 E-value=98 Score=31.18 Aligned_cols=45 Identities=16% Similarity=0.205 Sum_probs=33.8
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEe-cCCeEEEEEeCcEEEEcCcc
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaaGa 219 (522)
..+++++.++.|++|..+ .. .|++.+ .+|+..++.++ .||+|.|+
T Consensus 105 ~~gv~~~~~~~v~~i~~~-~~---~v~v~~~~~g~~~~~~~d-~lviAtG~ 150 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTE-KK---IVYAEHTKTKDVFEFSYD-RLLIATGV 150 (480)
T ss_dssp TTCCEEESSEEEEEEETT-TT---EEEEEETTTCCEEEEECS-EEEECCCE
T ss_pred hcCCEEEeCCEEEEEECC-CC---EEEEEEcCCCceEEEEcC-EEEECCCC
Confidence 458999999999999876 44 244444 25766678995 79999996
No 177
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=26.75 E-value=26 Score=35.44 Aligned_cols=49 Identities=22% Similarity=0.238 Sum_probs=34.6
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEe-------c---------CCeEEEEEeCcEEEEcCcchh
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVN-------S---------KGETVRVTANKEVILTAGAIA 221 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~-------~---------~g~~~~v~A~k~VILaaGai~ 221 (522)
..+++++.++.+++|.-+ +++.+|++.+ . +|++.++.++ .||+|.|.--
T Consensus 314 ~~Gv~~~~~~~~~~i~~~--g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD-~Vi~A~G~~p 378 (456)
T 2vdc_G 314 EEGVEFIWQAAPEGFTGD--TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQAD-LVIKALGFEP 378 (456)
T ss_dssp HTTCEEECCSSSCCEEEE--EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECS-EEEECSCEEC
T ss_pred HCCCEEEeCCCceEEeCC--CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECC-EEEECCCCCC
Confidence 468999999999888643 4555555531 1 2556789996 7999999643
No 178
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=26.52 E-value=37 Score=35.18 Aligned_cols=52 Identities=17% Similarity=0.280 Sum_probs=34.6
Q ss_pred ecchhhhhcccccCCCCCeEEEc--CcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 155 RFSAADAYLTPIAGKRTNLYVLK--RSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 155 R~s~~~~~l~~~~~~~~n~~v~~--~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
|-.....|+ +++ .++|++|+. ...|++|..+ ||+.. +|++ +.++ .||+|+|-
T Consensus 329 R~~~~~~y~-~~l-~~~nV~lv~~~~~~I~~it~~------gv~~~--dG~~--~~~D-vIV~ATGf 382 (540)
T 3gwf_A 329 RPLCDSGYY-EVY-NRPNVEAVAIKENPIREVTAK------GVVTE--DGVL--HELD-VLVFATGF 382 (540)
T ss_dssp SCEEESSTG-GGG-GSTTEEEEETTTSCEEEECSS------EEEET--TCCE--EECS-EEEECCCB
T ss_pred ccCCCccHH-HHh-cCCCEEEEeCCCCCccEEecC------eEEcC--CCCE--EECC-EEEECCcc
Confidence 333344677 456 799999996 6788887443 45443 5753 6785 78888884
No 179
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=26.38 E-value=50 Score=34.20 Aligned_cols=47 Identities=13% Similarity=0.269 Sum_probs=32.3
Q ss_pred hhhhcccccCCCCCeEEE--cCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 159 ADAYLTPIAGKRTNLYVL--KRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 159 ~~~~l~~~~~~~~n~~v~--~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
...|+ +++ .++|++|+ ....|++|..+ ||+.. +| ++.++ .||+|+|-
T Consensus 346 ~~~y~-~al-~~~~V~lvd~~~~~I~~it~~------gv~~~--dG---~~~~D-~iI~ATGf 394 (549)
T 4ap3_A 346 DSGYY-ETY-NRDNVELVDLRSTPIVGMDET------GIVTT--GA---HYDLD-MIVLATGF 394 (549)
T ss_dssp ESSTG-GGG-GSTTEEEEETTTSCEEEEETT------EEEES--SC---EEECS-EEEECCCE
T ss_pred CccHH-HHh-cCCCEEEEeCCCCCceEEeCC------cEEeC--CC---ceecC-EEEECCcc
Confidence 44566 556 79999998 24778887543 45443 46 57885 79999994
No 180
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=26.31 E-value=59 Score=33.84 Aligned_cols=51 Identities=27% Similarity=0.293 Sum_probs=37.6
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
++.+++++.+++|++|..+ ... |.+.+. +|+..++.++ .||||.|+ .|+++
T Consensus 104 ~~~gi~v~~~~~V~~id~~-~~~---v~v~~~~~g~~~~~~~d-~lviAtG~--~p~~p 155 (588)
T 3ics_A 104 KRFNLDIRVLSEVVKINKE-EKT---ITIKNVTTNETYNEAYD-VLILSPGA--KPIVP 155 (588)
T ss_dssp HHTTCEEECSEEEEEEETT-TTE---EEEEETTTCCEEEEECS-EEEECCCE--EECCC
T ss_pred HhcCcEEEECCEEEEEECC-CCE---EEEeecCCCCEEEEeCC-EEEECCCC--CCCCC
Confidence 4678999999999999886 443 444442 5777789995 69999997 45443
No 181
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=25.99 E-value=47 Score=33.06 Aligned_cols=43 Identities=26% Similarity=0.160 Sum_probs=30.4
Q ss_pred CeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh
Q psy14407 172 NLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 221 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~ 221 (522)
+.+|++++.|++|..+ +++. |.+.. +|+ +++| +.||+|++.-.
T Consensus 226 g~~i~~~~~V~~i~~~-~~~~--v~v~~-~~~--~~~a-d~VI~a~p~~~ 268 (453)
T 2yg5_A 226 GDDVFLNAPVRTVKWN-ESGA--TVLAD-GDI--RVEA-SRVILAVPPNL 268 (453)
T ss_dssp GGGEECSCCEEEEEEE-TTEE--EEEET-TTE--EEEE-EEEEECSCGGG
T ss_pred CCcEEcCCceEEEEEe-CCce--EEEEE-CCe--EEEc-CEEEEcCCHHH
Confidence 4689999999999887 4432 33333 454 5788 47999998643
No 182
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=25.97 E-value=73 Score=31.73 Aligned_cols=47 Identities=19% Similarity=0.242 Sum_probs=33.4
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
++.+++++.+++|++|..+ ... ..+.... ++...++..+ .+|||.|+
T Consensus 68 ~~~~i~~~~~~~V~~id~~-~~~-~~~~~~~-~~~~~~~~yd-~lVIATGs 114 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAINDE-RQT-VSVLNRK-TNEQFEESYD-KLILSPGA 114 (437)
T ss_dssp HHHCCEEEETEEEEEEETT-TTE-EEEEETT-TTEEEEEECS-EEEECCCE
T ss_pred HhcCCEEEeCCeEEEEEcc-CcE-EEEEecc-CCceEEEEcC-EEEECCCC
Confidence 3568999999999999776 332 2222222 5677788885 69999997
No 183
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=25.96 E-value=69 Score=31.39 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=33.1
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
.+.+++++.+ +|++|..+ +. .|++.+..++..++.++ .||+|.|+
T Consensus 67 ~~~gv~~~~~-~v~~i~~~-~~---~V~~~~g~~~~~~~~~d-~lViAtG~ 111 (409)
T 3h8l_A 67 PEKGIQFQEG-TVEKIDAK-SS---MVYYTKPDGSMAEEEYD-YVIVGIGA 111 (409)
T ss_dssp GGGTCEEEEC-EEEEEETT-TT---EEEEECTTSCEEEEECS-EEEECCCC
T ss_pred hhCCeEEEEe-eEEEEeCC-CC---EEEEccCCcccceeeCC-EEEECCCC
Confidence 4668999987 99998776 43 35555534456788995 79999997
No 184
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.85 E-value=29 Score=33.83 Aligned_cols=58 Identities=21% Similarity=0.238 Sum_probs=40.4
Q ss_pred hcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHHHhCCC
Q psy14407 162 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 232 (522)
Q Consensus 162 ~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl~SGig 232 (522)
++...+ ++.+++++++++|++|.. . +|++. +|+ +.++ .||+|.|..-+..||..+|+.
T Consensus 188 ~l~~~l-~~~gV~i~~~~~v~~i~~---~---~v~~~--~g~---i~~D-~vi~a~G~~p~~~ll~~~gl~ 245 (367)
T 1xhc_A 188 MIKDML-EETGVKFFLNSELLEANE---E---GVLTN--SGF---IEGK-VKICAIGIVPNVDLARRSGIH 245 (367)
T ss_dssp HHHHHH-HHTTEEEECSCCEEEECS---S---EEEET--TEE---EECS-CEEEECCEEECCHHHHHTTCC
T ss_pred HHHHHH-HHCCCEEEcCCEEEEEEe---e---EEEEC--CCE---EEcC-EEEECcCCCcCHHHHHhCCCC
Confidence 333334 567999999999999862 1 34442 453 8885 799999987766677776653
No 185
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=25.64 E-value=1e+02 Score=30.60 Aligned_cols=45 Identities=18% Similarity=0.316 Sum_probs=33.6
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEe-cCCeEEEEEeCcEEEEcCcc
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaaGa 219 (522)
+.+++++.++.|++|..+ .. .|++.+ .+|+..++.++ .+|||.|+
T Consensus 68 ~~gv~~~~~~~v~~i~~~-~~---~v~~~~~~~g~~~~~~~d-~lviAtG~ 113 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPK-EH---QVTVKDLVSGEERVENYD-KLIISPGA 113 (447)
T ss_dssp HTTCEEEETEEEEEEETT-TT---EEEEEETTTCCEEEEECS-EEEECCCE
T ss_pred HCCCEEEECCEEEEEeCC-CC---EEEEEecCCCceEEEeCC-EEEEcCCC
Confidence 458999999999998776 44 344444 25766678995 69999996
No 186
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=24.67 E-value=36 Score=34.84 Aligned_cols=44 Identities=18% Similarity=-0.002 Sum_probs=31.2
Q ss_pred CeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhh
Q psy14407 172 NLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN 222 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~T 222 (522)
+.+|++++.|++|..+ ++++. |+ ..+|+ ++.|+ .||+|++.-..
T Consensus 226 g~~i~~~~~V~~i~~~-~~~v~-v~--~~~g~--~~~ad-~VI~a~p~~~l 269 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQT-RENVL-VE--TLNHE--MYEAK-YVISAIPPTLG 269 (520)
T ss_dssp GGGEESSCCEEEEECS-SSSEE-EE--ETTSC--EEEES-EEEECSCGGGG
T ss_pred CCcEEcCCeeEEEEEC-CCeEE-EE--ECCCe--EEEeC-EEEECCCHHHH
Confidence 5689999999999887 44443 43 32565 47885 79999986443
No 187
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=24.05 E-value=53 Score=34.08 Aligned_cols=61 Identities=20% Similarity=0.186 Sum_probs=43.1
Q ss_pred CCcccccccccCCCCCCcccCCCCceeCcCCceEecc---cCCC-CCCCchhHHHHHHHHHHHHHHHhhh
Q psy14407 452 TSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADI---SVLP-NAIITQSDAISYMIGEKCADLVKTS 517 (522)
Q Consensus 452 ~~H~~Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~Da---Sv~P-~~~~~NPtlTi~Ala~r~Ad~i~~~ 517 (522)
..+-+|+.+.-.+ .-|+|.++++ ++|||.++- +++- .-+++|..+-.+..+.++++.+.+.
T Consensus 503 ~~~t~GGl~id~~---~~vl~~~g~~--I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 503 VHHTMGGVMIDTK---AEVMNAKKQV--IPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp EEEECCEEEBCTT---CEEECTTSCE--EEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEecCCeEECCC---ceEECCCCCC--cCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 3455677666533 2677777775 899999874 4442 2346888888899999999988764
No 188
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=23.67 E-value=51 Score=31.57 Aligned_cols=59 Identities=25% Similarity=0.233 Sum_probs=36.8
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh-hhHHH
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA-NAQLL 226 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~-Tp~LL 226 (522)
.+|...+ .+.+++++.+++|++|..++++. ..|+ ..+|+ ++.+ +.||+|.|+-. .|+.+
T Consensus 78 ~~l~~~~-~~~~~~~~~~~~v~~i~~~~~~~-~~v~--~~~g~--~~~~-~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 78 ESLWAQA-ERYNPDVVLNETVTKYTKLDDGT-FETR--TNTGN--VYRS-RAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp HHHHHHH-HTTCCEEECSCCEEEEEECTTSC-EEEE--ETTSC--EEEE-EEEEECCTTCSCCBCCC
T ss_pred HHHHHHH-HHhCCEEEcCCEEEEEEECCCce-EEEE--ECCCc--EEEe-eEEEEccCCCcCCCCCC
Confidence 3443333 45678999999999998862222 2233 22453 4778 47999999843 35443
No 189
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=23.53 E-value=76 Score=31.88 Aligned_cols=50 Identities=10% Similarity=0.039 Sum_probs=38.2
Q ss_pred CCeEEEcCcEEEEEEecCCCeEEEEEEEe--------------cCCeEEEEEeCcEEEEcCcchhhh
Q psy14407 171 TNLYVLKRSKVTKVIINDQNVATGVEYVN--------------SKGETVRVTANKEVILTAGAIANA 223 (522)
Q Consensus 171 ~n~~v~~~~~V~~I~~~~~~~a~gV~~~~--------------~~g~~~~v~A~k~VILaaGai~Tp 223 (522)
.+++++.++.+++|.-+ +++.+|++.+ .+|+..++.++ .||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d-~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ-LVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS-EEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcC-EEEEccccccCC
Confidence 68999999999998754 4566676653 13556789995 799999987766
No 190
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=23.48 E-value=1.5e+02 Score=27.18 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=43.5
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
...+...+..+.+.++... +....++++.+. .+...++.++ .||+|.|..-+..+|
T Consensus 199 ~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~i~~d-~vi~a~G~~pn~~~l 255 (314)
T 4a5l_A 199 NHPKIEVIWNSELVELEGD-GDLLNGAKIHNLVSGEYKVVPVA-GLFYAIGHSPNSKFL 255 (314)
T ss_dssp TCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred cccceeeEeeeeeEEEEee-eeccceeEEeecccccceeeccc-cceEecccccChhHh
Confidence 5677899999999998776 566778888764 5667889996 799999976555554
No 191
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=23.16 E-value=84 Score=32.33 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=37.0
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
++.+++++.+++|++|..+ ++. |.+.+. +|...++.++ .||||.|+ .|+.+
T Consensus 69 ~~~~i~~~~~~~V~~id~~-~~~---v~~~~~~~g~~~~~~~d-~lviAtG~--~p~~p 120 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRA-AKL---VTVRRLLDGSEYQESYD-TLLLSPGA--APIVP 120 (565)
T ss_dssp HHHCCEEETTEEEEEEETT-TTE---EEEEETTTCCEEEEECS-EEEECCCE--EECCC
T ss_pred HhcCcEEEECCEEEEEECC-CCE---EEEEecCCCCeEEEECC-EEEECCCC--CCCCC
Confidence 3468999999999999876 443 344432 4777789995 69999998 45443
No 192
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=22.93 E-value=93 Score=28.77 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=32.7
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
.++...+ .+.+++++. ++|++|..+ ++. +.+...+|+ ++++ +.||+|.|+
T Consensus 63 ~~l~~~~-~~~~v~~~~-~~v~~i~~~-~~~---~~v~~~~g~--~~~~-~~vv~AtG~ 112 (311)
T 2q0l_A 63 QPWQEQC-FRFGLKHEM-TAVQRVSKK-DSH---FVILAEDGK--TFEA-KSVIIATGG 112 (311)
T ss_dssp HHHHHHH-HTTSCEEEC-SCEEEEEEE-TTE---EEEEETTSC--EEEE-EEEEECCCE
T ss_pred HHHHHHH-HHcCCEEEE-EEEEEEEEc-CCE---EEEEEcCCC--EEEC-CEEEECCCC
Confidence 4444434 466899988 789999887 432 223222454 5778 479999996
No 193
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=22.43 E-value=55 Score=33.38 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=27.8
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCc
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAG 218 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaG 218 (522)
.+|++++.|++|..+ ++..+.|++. +|+ +++|+ .||+++.
T Consensus 215 ~~i~~~~~V~~I~~~-~~~~v~v~~~--~g~--~~~ad-~VI~t~p 254 (516)
T 1rsg_A 215 NWLKLSCEVKSITRE-PSKNVTVNCE--DGT--VYNAD-YVIITVP 254 (516)
T ss_dssp GGEETTCCEEEEEEC-TTSCEEEEET--TSC--EEEEE-EEEECCC
T ss_pred CEEEECCEEEEEEEc-CCCeEEEEEC--CCc--EEECC-EEEECCC
Confidence 579999999999886 2222344432 565 47884 6999885
No 194
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=22.21 E-value=1e+02 Score=31.51 Aligned_cols=56 Identities=16% Similarity=0.073 Sum_probs=37.9
Q ss_pred CCCCeEEEcCcEEEEEEec-CC-CeEEEEEEEecCC-eEEEEEeCcEEEEcCcchhhhHH
Q psy14407 169 KRTNLYVLKRSKVTKVIIN-DQ-NVATGVEYVNSKG-ETVRVTANKEVILTAGAIANAQL 225 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~-~~-~~a~gV~~~~~~g-~~~~v~A~k~VILaaGai~Tp~L 225 (522)
++.+++|++++.|++|... ++ .....|++...+| +..++.++ .||+|.|..-+..+
T Consensus 261 ~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D-~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 261 EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYN-TVMLAIGRDACTRK 319 (519)
T ss_dssp HHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEES-EEEECSCEEESCSS
T ss_pred HHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECC-EEEEecCCcccCCC
Confidence 5778999999999998664 21 1233455554344 45778896 79999997654443
No 195
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=22.05 E-value=56 Score=31.61 Aligned_cols=53 Identities=13% Similarity=0.072 Sum_probs=35.9
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhH
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 224 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~ 224 (522)
.+|...+ ...+++|+.+++|++|..+ + .|++. +|+ ++++ +.||.|.|+-...+
T Consensus 111 ~~L~~~~-~~~gv~i~~~~~v~~i~~~-~----~v~~~--~g~--~~~a-d~vV~AdG~~s~vr 163 (379)
T 3alj_A 111 DALVNRA-RALGVDISVNSEAVAADPV-G----RLTLQ--TGE--VLEA-DLIVGADGVGSKVR 163 (379)
T ss_dssp HHHHHHH-HHTTCEEESSCCEEEEETT-T----EEEET--TSC--EEEC-SEEEECCCTTCHHH
T ss_pred HHHHHHH-HhcCCEEEeCCEEEEEEeC-C----EEEEC--CCC--EEEc-CEEEECCCccHHHH
Confidence 3443433 3468999999999999773 4 34433 465 5889 47999999755443
No 196
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=21.37 E-value=1.1e+02 Score=29.83 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=33.8
Q ss_pred eEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHHH
Q psy14407 173 LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 227 (522)
Q Consensus 173 ~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LLl 227 (522)
++|+.+++|++|..+ ++. |.+...+|+ ++++ +.||.|.|+-...|=++
T Consensus 140 ~~i~~~~~v~~i~~~-~~~---v~v~~~~g~--~~~a-~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 140 DSVQFGKRVTRCEED-ADG---VTVWFTDGS--SASG-DLLIAADGSHSALRPWV 187 (407)
T ss_dssp GGEEESCCEEEEEEE-TTE---EEEEETTSC--EEEE-SEEEECCCTTCSSHHHH
T ss_pred CEEEECCEEEEEEec-CCc---EEEEEcCCC--EEee-CEEEECCCcChHHHHHh
Confidence 889999999999887 443 344433565 6889 47999999755544443
No 197
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=21.35 E-value=64 Score=33.05 Aligned_cols=53 Identities=17% Similarity=0.294 Sum_probs=34.8
Q ss_pred hhcccccCCCCCeEEEcCcEEEEEEec-CCCeEEEEEEEecCCeEEEEEeCcEEEEcCcc
Q psy14407 161 AYLTPIAGKRTNLYVLKRSKVTKVIIN-DQNVATGVEYVNSKGETVRVTANKEVILTAGA 219 (522)
Q Consensus 161 ~~l~~~~~~~~n~~v~~~~~V~~I~~~-~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGa 219 (522)
.++...+ .+.+++++.+++|++|..+ +.+....|++. +|. ++++ +.||+|.|+
T Consensus 271 ~~l~~~~-~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~--~g~--~~~~-d~vVlAtG~ 324 (521)
T 1hyu_A 271 GALKAHV-SDYDVDVIDSQSASKLVPAATEGGLHQIETA--SGA--VLKA-RSIIIATGA 324 (521)
T ss_dssp HHHHHHH-HTSCEEEECSCCEEEEECCSSTTSCEEEEET--TSC--EEEE-EEEEECCCE
T ss_pred HHHHHHH-HHcCCEEEcCCEEEEEEeccCCCceEEEEEC--CCC--EEEc-CEEEECCCC
Confidence 3444434 5678999999999999765 21222334332 464 5778 479999997
No 198
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=21.29 E-value=53 Score=34.97 Aligned_cols=50 Identities=20% Similarity=0.255 Sum_probs=37.2
Q ss_pred CCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchhhhHHH
Q psy14407 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 226 (522)
Q Consensus 169 ~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~Tp~LL 226 (522)
+..+++++++++|++|.-+ + |.+.. +|+..++.++ .||+|.|..-...|+
T Consensus 584 ~~~GV~v~~~~~v~~i~~~--~----v~~~~-~G~~~~i~~D-~Vi~a~G~~p~~~l~ 633 (671)
T 1ps9_A 584 LSRGVKMIPGVSYQKIDDD--G----LHVVI-NGETQVLAVD-NVVICAGQEPNRALA 633 (671)
T ss_dssp HHTTCEEECSCEEEEEETT--E----EEEEE-TTEEEEECCS-EEEECCCEEECCTTH
T ss_pred HhcCCEEEeCcEEEEEeCC--e----EEEec-CCeEEEEeCC-EEEECCCccccHHHH
Confidence 4678999999999998632 2 33433 6877889996 799999977655554
No 199
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=21.10 E-value=1.2e+02 Score=30.70 Aligned_cols=48 Identities=21% Similarity=0.249 Sum_probs=34.6
Q ss_pred CCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEEeCcEEEEcCcchh
Q psy14407 170 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 221 (522)
Q Consensus 170 ~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaaGai~ 221 (522)
..+++++.++.|.+|..+ +..+. +...+ +++..++.++ .+|||.|+..
T Consensus 172 ~~~v~~~~~~~v~~i~~~-~~~~~-~~~~~-~~~~~~~~~d-~lvlAtGa~~ 219 (493)
T 1y56_A 172 NENTKIYLETSALGVFDK-GEYFL-VPVVR-GDKLIEILAK-RVVLATGAID 219 (493)
T ss_dssp CTTEEEETTEEECCCEEC-SSSEE-EEEEE-TTEEEEEEES-CEEECCCEEE
T ss_pred hcCCEEEcCCEEEEEEcC-CcEEE-EEEec-CCeEEEEECC-EEEECCCCCc
Confidence 568999999999998776 43332 22223 5776788995 6999999743
No 200
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=20.59 E-value=1.8e+02 Score=30.77 Aligned_cols=44 Identities=20% Similarity=0.147 Sum_probs=31.5
Q ss_pred CeEEEcCcEEEEEEecCCCeEEEEEEEec--CCeEEEEEeCcEEEEcCc
Q psy14407 172 NLYVLKRSKVTKVIINDQNVATGVEYVNS--KGETVRVTANKEVILTAG 218 (522)
Q Consensus 172 n~~v~~~~~V~~I~~~~~~~a~gV~~~~~--~g~~~~v~A~k~VILaaG 218 (522)
+++|+.++.|++|..+ +.. +.|++.+. ++...+++|+ .||++..
T Consensus 410 ~l~I~l~~~V~~I~~~-~~~-v~V~~~~~~~~~~~~~~~Ad-~VI~tvP 455 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYT-ASG-CEVIAVNTRSTSQTFIYKCD-AVLCTLP 455 (662)
T ss_dssp TCEEETTEEEEEEEEE-TTE-EEEEEEESSCTTCEEEEEES-EEEECCC
T ss_pred cCceecCCeEEEEEEC-CCc-EEEEEeecccCCCCeEEEeC-EEEECCC
Confidence 5799999999999997 332 34555541 2334678995 6998877
No 201
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=20.45 E-value=70 Score=33.12 Aligned_cols=61 Identities=21% Similarity=0.199 Sum_probs=42.1
Q ss_pred CCcccccccccCCCCCCcccCCCCceeCcCCceEeccc---CCC-CCCCchhHHHHHHHHHHHHHHHhhh
Q psy14407 452 TSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADIS---VLP-NAIITQSDAISYMIGEKCADLVKTS 517 (522)
Q Consensus 452 ~~H~~Gt~rMG~~~~~~~VVD~~~rv~g~~NL~V~DaS---v~P-~~~~~NPtlTi~Ala~r~Ad~i~~~ 517 (522)
..|-+|+.+.-.+ .-|+|.++++ ++|||.++-. ++- .-+++|..+-.+..+.++++.+++.
T Consensus 498 ~~~t~GGl~vd~~---~~vl~~~g~~--I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~ 562 (566)
T 1qo8_A 498 IHHTMGGVAINTT---ASVLDLQSKP--IDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKH 562 (566)
T ss_dssp EEEECCEECBCTT---CEEEBTTSCE--EEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cceecccEEECCC---CeEECCCCCE--eCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 4455666666533 2677777765 8999999743 432 2246788888888999999888754
No 202
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=20.10 E-value=1.1e+02 Score=30.24 Aligned_cols=64 Identities=23% Similarity=0.177 Sum_probs=40.4
Q ss_pred hcccccCCCCCeEEEcCcEEEEEEecCCCeEEEEEEEecCCe---EEEEEeCcEEEEcCcchhhhHHHHHhCC
Q psy14407 162 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGE---TVRVTANKEVILTAGAIANAQLLLLSGI 231 (522)
Q Consensus 162 ~l~~~~~~~~n~~v~~~~~V~~I~~~~~~~a~gV~~~~~~g~---~~~v~A~k~VILaaGai~Tp~LLl~SGi 231 (522)
.+...+ ++.++++++++.|++|.-+ .+ .++..+.+|+ ..++.++ .||++.|......+...+|+
T Consensus 213 ~~~~~l-~~~gI~~~~~~~v~~v~~~---~v-~~~~~~~~g~~~~~~~i~~D-~vv~~~g~~~~~~~~~~~gl 279 (437)
T 3sx6_A 213 ILTKGL-KEEGIEAYTNCKVTKVEDN---KM-YVTQVDEKGETIKEMVLPVK-FGMMIPAFKGVPAVAGVEGL 279 (437)
T ss_dssp HHHHHH-HHTTCEEECSEEEEEEETT---EE-EEEEECTTSCEEEEEEEECS-EEEEECCEECCHHHHTSTTT
T ss_pred HHHHHH-HHCCCEEEcCCEEEEEECC---eE-EEEecccCCccccceEEEEe-EEEEcCCCcCchhhhccccc
Confidence 343444 5779999999999998543 22 1222222454 5678895 79999987666544433554
Done!