RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14407
(522 letters)
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 116 bits (290), Expect = 5e-29
Identities = 75/301 (24%), Positives = 117/301 (38%), Gaps = 24/301 (7%)
Query: 8 SEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GY 66
S DHAY L N I +G GLGGS+ V + R +++ + G
Sbjct: 72 SSVDHAYETVE-----LATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGN 126
Query: 67 NGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVG--------LFKNKENNIIREI 118
GW +D Y +++E R+ + A H + + I +
Sbjct: 127 EGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPIVKA 186
Query: 119 FETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKR 178
++ ++ G P KD + +R AA +L P +R NL VL
Sbjct: 187 LMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNY-QRPNLQVLTG 245
Query: 179 SKVTKVIINDQN---VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKA 235
V KV+++ A GVE+ KG T V A EV+L AG+ + +L SGIG K+
Sbjct: 246 QYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKS 305
Query: 236 HLDEVKIPVKQDLRVGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNA 295
L+ + I DL VG + + G V VY + + + + I P +
Sbjct: 306 ILEPLGIDTVVDLPVGLCSMMPKEMGGVVDNA-----ARVYGVQGL-RVIDGSIPPTQMS 359
Query: 296 G 296
Sbjct: 360 S 360
Score = 61.8 bits (149), Expect = 6e-11
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 417 LAGGTLMS---LNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTP 473
LA G+ +S L + L PVG M + VV
Sbjct: 285 LAAGSAVSPTILEYSGIGMKSILEPLGIDT-VVDL------PVGLCSMMP-KEMGGVVDN 336
Query: 474 DLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSY 518
+V G++GLRV D S+ P + + + Y + K +D + Y
Sbjct: 337 AARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDY 381
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 115 bits (288), Expect = 9e-29
Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 21/261 (8%)
Query: 8 SEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGY 66
+ D YL P + N I AGKGLGGS+ + + R +++ K G
Sbjct: 79 TTVDQNYLTVP------LINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGM 132
Query: 67 NGWGYDETLKYFVKSEDYRSV-------IYNESKAVHGTQGYLPVGLFKN-KENNIIREI 118
GW +D +Y K+E R+ ++ + HGT G + G N + + I +
Sbjct: 133 EGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKA 192
Query: 119 FETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKR 178
+ LG P +D + + + +R AA A+L P +R+NL +L
Sbjct: 193 LMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPN-YQRSNLEILTG 251
Query: 179 SKVTKVIINDQ---NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKA 235
V KV+ A GV + +K V A EV+L AG+ + +L SGIG K+
Sbjct: 252 QMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKS 311
Query: 236 HLDEVKIPVKQDLR--VGENL 254
LD+ + DL + +
Sbjct: 312 VLDQANVTQLLDLPVGICSMM 332
Score = 54.5 bits (130), Expect = 2e-08
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 455 PVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLV 514
PVG M + + VV KV G +GLRV D S+ P + + I Y + K AD +
Sbjct: 325 PVGICSMM-SRELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAI 383
Query: 515 KTSY 518
Y
Sbjct: 384 LDDY 387
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 79.6 bits (195), Expect = 8e-17
Identities = 53/233 (22%), Positives = 82/233 (35%), Gaps = 29/233 (12%)
Query: 25 GVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKYFVKSEDY 84
V I G+ LGG+S + +Y R + Y W D + + ED
Sbjct: 89 FVSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASG----VDWDMDLVNQTYEWVEDT 144
Query: 85 RSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFA 144
+ + + + +T+ E G + + +
Sbjct: 145 ---------------------IVYKPNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRI 183
Query: 145 ELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGET 204
G R AAD L + V + ATGV Y +S G
Sbjct: 184 TGSTFDNKGTR-HAADELLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTP 242
Query: 205 VRVT--ANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 254
+ + EVI++AG I QLLLLSG+GP+++L + IPV VG+ L
Sbjct: 243 HQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQCL 295
Score = 28.7 bits (63), Expect = 1.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 470 VVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIG 507
V+ D +V GI LRV D S P + M+G
Sbjct: 299 VLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLG 336
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 79.3 bits (194), Expect = 1e-16
Identities = 41/231 (17%), Positives = 72/231 (31%), Gaps = 19/231 (8%)
Query: 56 YDYENFAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNII 115
+ +F+ + Y K + T G + N++
Sbjct: 102 PNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTDH-----PSTDGQRY----LEQSFNVV 152
Query: 116 REIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYV 175
++ + Q D + V + + A A R N
Sbjct: 153 SQLLKG--QGYNQATINDNPNYKDHVFGY--SAFDFLNGKRAGPVATYLQTALARPNFTF 208
Query: 176 LKRSKVTKVIINDQNVATGVEYVNS---KGETVRVTANKEVILTAGAIANAQLLLLSGIG 232
V+ V+ + + GV+ + + VT VIL+AGA +++L SGIG
Sbjct: 209 KTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 267
Query: 233 PKAHLDEVKI-PVKQDLRVGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVF 282
P + V+ P +N +N + S+P V S VF
Sbjct: 268 PTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIG-SSPQSAVVDSNVKVF 317
Score = 51.6 bits (122), Expect = 1e-07
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 455 PVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLV 514
PVG +G+ +AVV ++KV G L + D ++P+ E+ A +
Sbjct: 295 PVGMTTIGS-SPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKI 353
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 79.3 bits (194), Expect = 1e-16
Identities = 28/237 (11%), Positives = 57/237 (24%), Gaps = 24/237 (10%)
Query: 27 RNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK----------LGYNGWGYDETLK 76
+ + L +S + + R S ++ + +G +
Sbjct: 72 VSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTHWTCATP 131
Query: 77 YFVKSEDYRSVIYNESKAVHGTQGYLPVGLFK-NKENNIIREIFETSAQELGYPCPKDMN 135
F + + K + F+ S +
Sbjct: 132 RFDREQRPL----LVKDDADADDAEWDRLYTKAESYFQTGTDQFKESIRHNLVLNKLAEE 187
Query: 136 ---DRYVDVGFAELPGMTRYGLRFSAADAYLTPI-----AGKRTNLYVLKRSKVTKVIIN 187
R + + +S+A+ + +V+ N
Sbjct: 188 YKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRN 247
Query: 188 DQN-VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 243
N + + +LTAGA+ N QLL+ SG G + P
Sbjct: 248 ALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPTNPP 304
Score = 53.4 bits (127), Expect = 3e-08
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Query: 435 WRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDP-NAVVTPDLKVKGIKGLRVADISVLPN 493
+G+ MG + N V D +V G K L + +P
Sbjct: 289 NSGFGQLGRPNPTNPPELLPSLGSHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPT 348
Query: 494 AIITQSDAISYMIGEKCADLVKTSY 518
A + + K + +K ++
Sbjct: 349 AYGANPTLTAMSLAIKSCEYIKQNF 373
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 74.6 bits (182), Expect = 5e-15
Identities = 33/210 (15%), Positives = 76/210 (36%), Gaps = 9/210 (4%)
Query: 25 GVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKYFVKSEDY 84
V ++ + G+G+GG S V + +E + +YF ++
Sbjct: 90 RVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEI---LPRVDSSEMYDRYFPRANSM 146
Query: 85 RSVIYNESKAVHGTQGYLPVGLFKNK-ENNIIREIFETSAQELGYPCPKDMNDRYVDVGF 143
V + ++K T+ Y + + + + +F + + GY ++
Sbjct: 147 LRVNHIDTKWFEDTEWYKFARVSREQAGKAGLGTVFVPNVYDFGYM-QREAAGEVPKSAL 205
Query: 144 AELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVII-NDQNVATGVEYVNSKG 202
A + S YL A + + +V + D A VE ++ G
Sbjct: 206 ATEVIYGNNHGKQSLDKTYLAA-ALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDG 264
Query: 203 ETV--RVTANKEVILTAGAIANAQLLLLSG 230
+ + + + + + L AG++ + +LL+ +
Sbjct: 265 KLLATKEISCRYLFLGAGSLGSTELLVRAR 294
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 73.4 bits (179), Expect = 9e-15
Identities = 35/231 (15%), Positives = 70/231 (30%), Gaps = 11/231 (4%)
Query: 4 VLSLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK 63
V + F + R + IK+ G+G+GG S V + +E
Sbjct: 73 VSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILP 132
Query: 64 LGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVG--LFKNKENNIIREIFET 121
+ Y++ ++ + + K + + F
Sbjct: 133 SVDSNEMYNKYFPRANTGLGVNNIDQA----WFESTEWYKFARTGRKTAQRSGFTTAFVP 188
Query: 122 SAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKV 181
+ + Y + + G + S YL A L + +V
Sbjct: 189 NVYDFEYMKK-EAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQ-AAATGKLTITTLHRV 246
Query: 182 TKVII-NDQNVATGVEYVNSKGETV--RVTANKEVILTAGAIANAQLLLLS 229
TKV + +E ++ +G V +V V AG++ ++LL+
Sbjct: 247 TKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSM 297
>d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger
[TaxId: 5061]}
Length = 196
Score = 62.9 bits (152), Expect = 4e-12
Identities = 30/217 (13%), Positives = 60/217 (27%), Gaps = 27/217 (12%)
Query: 246 QD-LRVGENLKLNAQFTGP-VMAFSAPLKRTVYSQ-EMVFKYLVNRIGPLSNAGLWSFTG 302
QD ++ + G A+ A T E + L ++ + + G
Sbjct: 3 QDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEAVAR-GG 61
Query: 303 YIDTLQNTARPDLEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMS 362
+ +T + + + N V + + L+ +
Sbjct: 62 FHNTTALLIQYENYRDWI------------------VNHNVAYSELFLDTAGVAS-FDVW 102
Query: 363 LVNPKSCGKVTLKSADPLA-PPCIDTGILSEPEDLATLIRGTDYITRLEQTEAIRLAGGT 421
+ P + G V + DP D DL T + + A++
Sbjct: 103 DLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTYFAG 162
Query: 422 LMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGT 458
+ + +WT YI + + VGT
Sbjct: 163 ET---IPGDNLAYDADLSAWTEYIPYHFRPNYHGVGT 196
>d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 196
Score = 62.1 bits (150), Expect = 1e-11
Identities = 24/217 (11%), Positives = 52/217 (23%), Gaps = 27/217 (12%)
Query: 246 QD-LRVGENLKLNAQFTGPVMAFSAPLKRTVYSQ--EMVFKYLVNRIGPLSNAGLWSFTG 302
QD + + ++ G A + L ++ + + G
Sbjct: 3 QDQTTTTVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQWAEETVARG-G 61
Query: 303 YIDTLQNTARPDLEIHLLYFQQNDIRNMCKIKRAYDFNDEVQTAYVNLNKRTDMGVISMS 362
+ + + + + L DE +
Sbjct: 62 FHNVTALKVQYENYRNWLL-------------------DEDVAFAELFMDTEGKINFDLW 102
Query: 363 LVNPKSCGKVTLKSADPLA-PPCIDTGILSEPEDLATLIRGTDYITRLEQTEAIRLAGGT 421
+ P + G V + S+DP D DL + L A++
Sbjct: 103 DLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAG 162
Query: 422 LMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGT 458
L + + W+ Y+ + V +
Sbjct: 163 ET---LPGYNLVQNATLSQWSDYVLQNFRPNWHAVSS 196
>d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus
dulcis) [TaxId: 3755]}
Length = 170
Score = 54.7 bits (131), Expect = 2e-09
Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 6/102 (5%)
Query: 357 GVISMSLVNPKSCGKVTLK-SADPLAPPCIDTGILSEPEDLATLIRGTDYITRLEQTEAI 415
+ + P S G +TLK S++ P + S DL+ + G I L T+A+
Sbjct: 63 AHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDAL 122
Query: 416 R-LAGGTLMSLNLEACSQYPW----RSTHSWTCYIRHLTTTT 452
+ L + P ++ + R +
Sbjct: 123 KPYKVEDLPGVEGFNILGIPLPKDQTDDAAFETFCRESVASY 164
>d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome
cellobiose dehydrogenase (CDH), substrate-binding domain
{Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}
Length = 181
Score = 51.0 bits (121), Expect = 4e-08
Identities = 16/181 (8%), Positives = 47/181 (25%), Gaps = 31/181 (17%)
Query: 278 QEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQNTARPDLEIHLLYFQQNDIRNMCKIKRAY 337
+YL N+ G + A + + + + +
Sbjct: 32 PADAAQYLANQSGVFAGASPKLNFWRAYSGSDGFTRYAQGTVRPGAASVN---------- 81
Query: 338 DFNDEVQTAYVNLNKRTDMGVISMSLVNPKSCGKVTLKSADPLAPPCIDTGILSEPEDLA 397
+ + N + +S G++ + + L + L P D
Sbjct: 82 --------SSLPYNASQIFTITVYLSTGIQSRGRIGIDA--ALRGTVLTPPWLVNPVDKT 131
Query: 398 TLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVG 457
L++ + + +++ +Q + + T +++ V
Sbjct: 132 VLLQALHDVVSNIGSIP-------GLTMITPDVTQ----TLEEYVDAYDPATMNSNHWVS 180
Query: 458 T 458
+
Sbjct: 181 S 181
>d1tq5a1 b.82.1.12 (A:1-231) Hypothetical protein YhhW {Escherichia
coli [TaxId: 562]}
Length = 231
Score = 27.4 bits (60), Expect = 3.6
Identities = 16/122 (13%), Positives = 31/122 (25%), Gaps = 34/122 (27%)
Query: 129 PCPKDMNDRYVDVGFAELPGMTRYG--------------------LRFSAADAYLTPIAG 168
P + RY F + G + A
Sbjct: 121 PEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAE 180
Query: 169 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLL 228
+R + V+K V IN +T + + + A+ ++++LL
Sbjct: 181 RRVWIQVVK----GNVTINGVKASTSDGLAIWDEQAISIHADS----------DSEVLLF 226
Query: 229 SG 230
Sbjct: 227 DL 228
>d1kl9a1 a.60.14.1 (A:89-182) Eukaryotic initiation factor 2alpha,
eIF2alpha, domain 2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 25.5 bits (56), Expect = 5.3
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 24/75 (32%)
Query: 89 YNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPG 148
+ +SK V+ +I+R + A+ L Y + + + +
Sbjct: 13 FTKSKTVY----------------SILRHV----AEVLEYTKDEQLESLFQRTAW---VF 49
Query: 149 MTRYGLRFSAA-DAY 162
+Y A DA+
Sbjct: 50 DDKYKRPGYGAYDAF 64
>d1gwma_ b.18.1.19 (A:) Non-catalytic protein 1, Ncp1 {Piromyces
equi [TaxId: 99929]}
Length = 153
Score = 25.7 bits (56), Expect = 9.6
Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 58 YENFAKL--GYNGWGYDETLKYF 78
++N + L GY+ WG+ TL Y+
Sbjct: 11 FKNASGLPNGYDNWGWGCTLSYY 33
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.134 0.390
Gapped
Lambda K H
0.267 0.0452 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,860,322
Number of extensions: 85442
Number of successful extensions: 198
Number of sequences better than 10.0: 1
Number of HSP's gapped: 189
Number of HSP's successfully gapped: 20
Length of query: 522
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 433
Effective length of database: 1,185,626
Effective search space: 513376058
Effective search space used: 513376058
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.7 bits)