BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14408
(720 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 164/292 (56%), Gaps = 17/292 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 493
+D I++G +AG V+A+RLSEV KVLLIEAGGD P+ ++IP M S+ D+ Y
Sbjct: 65 YDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNT 124
Query: 494 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 553
EP + A L R GK LGG+S + ++Y RG DY+++A G GW Y + L
Sbjct: 125 EPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDVLP 184
Query: 554 YFVKSEDYRSVIYNESKAV----HGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPK 609
+F KSED E AV H G LPVG F N + + +E+G+ +
Sbjct: 185 FFKKSEDNL-----ELDAVGTEYHAKGGLLPVGKF--PYNPPLSYALLKAGEEMGFSV-Q 236
Query: 610 DMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIN--DQN 667
D+N + GF R G+R+S+A A+L P A R NL++L + VTKV+I+ +N
Sbjct: 237 DLNGQN-STGFMIAQMTARNGIRYSSARAFLRP-ARMRNNLHILLNTTVTKVLIHPGTKN 294
Query: 668 VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
V GVE + G ++ KEVI++ GA+ + Q+LLLSG+GPK L +V +
Sbjct: 295 V-VGVEVSDQFGSMRKILVKKEVIVSGGAVNSPQILLLSGVGPKEDLQKVNV 345
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 161/288 (55%), Gaps = 9/288 (3%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 493
+D I++G +AG V+A+RLSEV KVLLIEAGGD P+ ++IP M S+ D+ Y
Sbjct: 65 YDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNT 124
Query: 494 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 553
EP A L R GK LGG+S + ++Y RG DY+++A G GW Y++ L
Sbjct: 125 EPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLP 184
Query: 554 YFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMND 613
+F KSED + H G LPVG F N + + +ELG+ D+N
Sbjct: 185 FFKKSEDNLD-LDEVGTEYHAKGGLLPVGKF--PYNPPLSYAILKAGEELGFSV-HDLNG 240
Query: 614 RYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVII--NDQNVATG 671
+ GF R G+R+S+A A+L P A R NL++L + TK++I + +NV G
Sbjct: 241 QN-STGFMIAQMTARNGIRYSSARAFLRP-ARMRNNLHILLNTTATKILIHPHTKNV-LG 297
Query: 672 VEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
VE + G T ++ KEV+L+AGA+ + +LLLSG+GPK L +V +
Sbjct: 298 VEVSDQFGSTRKILVKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNV 345
>sp|Q6LGH5|BETA_PHOPR Choline dehydrogenase OS=Photobacterium profundum GN=betA PE=3 SV=1
Length = 568
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 161/295 (54%), Gaps = 28/295 (9%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG-DTPIHSRIPGMSSVLS--LSEFDHA 490
+D IIVGA +AGCVLA+RLS +LL+EAGG D I ++P + LS ++ +A
Sbjct: 5 YDYIIVGAGSAGCVLADRLSASGEHYILLLEAGGSDRSIFIQMP---TALSYPMNSEKYA 61
Query: 491 YLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDE 550
+ E AGL R+ + G+ LGGSS++ ++Y RG + DY+ + + G GW Y E
Sbjct: 62 WQFETQPEAGLDSRS--LHCPRGRVLGGSSSINGMVYVRGHACDYDEWVEQGAEGWSYQE 119
Query: 551 TLKYFVKSEDYRSVIYNESKAVHGTQGYL----PVGLF--KNKENNIIREIFETSAQELG 604
L YF ++E + +HG Y PVG + E N + + F + Q+ G
Sbjct: 120 CLPYFRRAESW----------IHGEDTYRGGDGPVGTCNGNDMELNPLYQAFIDAGQQAG 169
Query: 605 YPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIN 664
YP D N Y GF + G+R S ++AYL A KR+NL V K KV+I
Sbjct: 170 YPKTDDYNG-YQQEGFGPMHMTVDKGIRASTSNAYLRR-AMKRSNLTVRKGVVTRKVLIK 227
Query: 665 DQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
++ A GVE + G+ V AN EV+L+AG++ + QLL LSGIGPKA L++ I
Sbjct: 228 NKQ-AIGVE-IEVGGKVQSVYANTEVLLSAGSVGSPQLLQLSGIGPKAVLEQAGI 280
>sp|A7N2P9|BETA_VIBHB Choline dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=betA PE=3 SV=1
Length = 569
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 16/289 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG-DTPIHSRIPGMSSVLSLSEFDHAYL 492
+D IIVGA +AGCVLA+RLSE +VLL+EAGG D I ++P + LS Y
Sbjct: 5 YDYIIVGAGSAGCVLADRLSESGQHQVLLLEAGGSDKSIFIQMP---TALSYPMNTEKYA 61
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+ A G+ ++ GK LGGSS++ ++Y RG + D++ + G GW Y L
Sbjct: 62 WQFETVAEEGLDGRQLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEAEGAKGWNYQACL 121
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNI--IREIFETSAQELGYPCPKD 610
YF K+E + +E + G PVG + + + + F + ++ GYP +D
Sbjct: 122 PYFRKAETWTGGA-DEYRGGSG-----PVGTCNGNDMKLNPLYQAFIEAGKDAGYPETQD 175
Query: 611 MNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVAT 670
N Y GF + G+R S ++AYL+ A KR+N ++K ++++ + A
Sbjct: 176 YNG-YQQEGFGPMHMTVDKGVRASTSNAYLSR-AKKRSNFTLMKGVTAHRILLEGKK-AV 232
Query: 671 GVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
G+E+ S GE + ANKEV+ +AG+I + QLL LSGIGPK LD+ I
Sbjct: 233 GIEFEQS-GEIKQCFANKEVVSSAGSIGSVQLLQLSGIGPKTVLDKAGI 280
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 156/289 (53%), Gaps = 17/289 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG-DTPIHSRIPGMSSVLSLSEFDHAYL 492
FD I+VG +AGCVLA RLSE S++V LIEAG DT +P + ++ L
Sbjct: 5 FDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHTWDLL 64
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
EP + A N +I G+ LGG S++ ++ RG D++ +A G +GW + +
Sbjct: 65 TEPQKHA----NNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRDVQ 120
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
KYF++SE + ++ S HGT G P+G+ E N F S QE+G P D N
Sbjct: 121 KYFIRSEG--NAVF--SGTWHGTNG--PLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFN 174
Query: 613 DRYVDVGFAELPGMT-RYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATG 671
+ A + MT R R S A YL P G R NL V+ R+ V K++ N ATG
Sbjct: 175 GASQE--GAGIYQMTIRNNRRCSTAVGYLRPALG-RKNLTVVTRALVLKIVFNGTR-ATG 230
Query: 672 VEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
V+Y+ + G A++E+++TAGAI +L++LSG+GP AHL E IP
Sbjct: 231 VQYI-ANGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIP 278
>sp|Q6FDF9|BETA_ACIAD Choline dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betA
PE=3 SV=1
Length = 553
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 157/294 (53%), Gaps = 20/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + + VLL+EAGG +++P + L ++
Sbjct: 6 FDYIIIGAGSAGNVLAARLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAYPLQGRRYNW 65
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AYL EP + N R++ GKGLGGSS + + Y RG + D E ++KL G W Y
Sbjct: 66 AYLTEPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEGWSKLKGLENWTY 121
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R + N+ HG G + V K+ N + + E Q GYP
Sbjct: 122 ADCLPYYKKAET-RDIGGND---YHGDHGPVSVATPKDNNNVLFHAMVEAGVQA-GYPRT 176
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T+ G R S A YL +A +R NL ++ + K++ N +
Sbjct: 177 DDLNG-YQQEGFGPMDRTVTKNGRRSSTARGYL-DMAKERPNLTIITHAMTNKILFNGKQ 234
Query: 668 VATGVEYVNS--KGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
A GVEY+ K + +V ANKEV+L AGAIA+ Q+L SG+G L + I
Sbjct: 235 -AIGVEYIQGADKRDLKKVMANKEVLLCAGAIASPQILQRSGVGESTFLKSMDI 287
>sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1
Length = 560
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 160/294 (54%), Gaps = 21/294 (7%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPG-MSSVLSLSEFDH 489
+D II+GA +AG VLA RL+E ++VLL+EAGG +++P ++ L ++
Sbjct: 7 YDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 66
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
A+ +P + + N R++ GKGLGGSS + + Y RG + DY+N+AK+ G W Y
Sbjct: 67 AFETDPEPY----MNNRRMECGRGKGLGGSSLINGMCYLRGNALDYDNWAKIPGLEDWNY 122
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKE-NNIIREIFETSAQELGYPC 607
+ L YF ++E R + N+ HG G PV + KE NN + F + E GYP
Sbjct: 123 LQCLPYFKRAET-RDIGPND---YHGGDG--PVSVATPKEGNNELYGAFIRAGIEAGYPA 176
Query: 608 PKDMNDRYVDVGFAELPGMTR-YGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQ 666
+D+N Y GF + T G R S A YL IA +R NL ++ T VI +
Sbjct: 177 TEDVNG-YQQEGFGPMDRTTTPNGRRASTARGYLD-IAKQRPNL-TIETHATTDVIEFEG 233
Query: 667 NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y KG+ RV A +EV+L AGAIA+ Q+L SG+G HL+E IP
Sbjct: 234 KRAVGVSY-ERKGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIP 286
>sp|Q1IG70|BETA_PSEE4 Choline dehydrogenase OS=Pseudomonas entomophila (strain L48)
GN=betA PE=3 SV=1
Length = 565
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 158/294 (53%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD IIVGA +AG LA RL+E +S+ VLL+EAGG +++P + L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDASVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P F + R++ GKGLGGSS + + Y RG + D++ +A+L G W Y
Sbjct: 65 AYETDPEPF----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTY 120
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVATPKAGNNPLFHAMVEAGVQA-GYPRT 175
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
+D+N Y GF + +T+ G R S A YL A KR NL ++ + +V+ D
Sbjct: 176 EDLNG-YQQEGFGPMDRSVTKKGRRSSTARGYLDQ-AKKRPNLTIVTHALSDRVLF-DGK 232
Query: 668 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y V E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IP
Sbjct: 233 RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIP 286
>sp|Q8D3K2|BETA_VIBVU Choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=betA
PE=3 SV=1
Length = 560
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 16/289 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG-DTPIHSRIPGMSSVLS--LSEFDHA 490
+D IIVGA +AGCVLA+RLSE VLL+EAGG D I ++P + LS ++ +A
Sbjct: 5 YDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMP---TALSYPMNSEKYA 61
Query: 491 YLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDE 550
+ E A L R R+ GK LGGSS++ ++Y RG + D++ + + G GW Y
Sbjct: 62 WQFETDAEADLDGR--RLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQA 119
Query: 551 TLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKD 610
L YF ++E++ I E + G G L N + F + +E GYP D
Sbjct: 120 CLPYFRRAENW---IDGEDE-YRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSD 175
Query: 611 MNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVAT 670
N Y GF + + G+R S ++AYL+ A KR+N ++K V ++++ ++ A
Sbjct: 176 YNG-YQQEGFGPMHMTVKNGVRASTSNAYLSR-AKKRSNFKLIKGVVVQRILLEEKR-AV 232
Query: 671 GVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
GVE+ GE A EVI +AG+I + QLL LSGIGPK L++ +
Sbjct: 233 GVEF-ELAGELRTCFAKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGV 280
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 16/289 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG-DTPIHSRIPGMSSVLS--LSEFDHA 490
+D IIVGA +AGCVLA+RLSE VLL+EAGG D I ++P + LS ++ +A
Sbjct: 5 YDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMP---TALSYPMNSEKYA 61
Query: 491 YLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDE 550
+ E A L R R+ GK LGGSS++ ++Y RG + D++ + + G GW Y
Sbjct: 62 WQFETDAEADLDGR--RLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQA 119
Query: 551 TLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKD 610
L YF ++E++ I E + G G L N + F + +E GYP D
Sbjct: 120 CLPYFRRAENW---IDGEDE-YRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSD 175
Query: 611 MNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVAT 670
N Y GF + + G+R S ++AYL+ A KR+N ++K V ++++ ++ A
Sbjct: 176 YNG-YQQEGFGPMHMTVKNGVRASTSNAYLSR-AKKRSNFKLIKGVVVQRILLEEKR-AV 232
Query: 671 GVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
GVE+ GE A EVI +AG+I + QLL LSGIGPK L++ +
Sbjct: 233 GVEF-ELAGELRTCFAKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGV 280
>sp|A5WA97|BETA_PSEP1 Choline dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=betA PE=3 SV=1
Length = 565
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD IIVGA +AG LA RL+E + + VLL+EAGG +++P + L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + + R++ GKGLGGSS + + Y RG + D++ +A+L G W Y
Sbjct: 65 AYETDPEPY----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTY 120
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGDGPVSVATPKAGNNPLFHAMVEAGVQA-GYPRT 175
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
+D+N Y GF + +T+ G R S A YL A KR NL ++ + +V+ D
Sbjct: 176 EDLNG-YQQEGFGPMDRSVTKNGRRSSTARGYLDQ-AKKRPNLTIVTHALTDRVLF-DGK 232
Query: 668 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y V E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IP
Sbjct: 233 RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIP 286
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 159/301 (52%), Gaps = 23/301 (7%)
Query: 429 KSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG------GDTPIHSRI---PGMS 479
+S D + ++VGA +AGCVLA RL+E + +VLL+EAG G + +I +
Sbjct: 36 ESRDEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALV 95
Query: 480 SVLSLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFA 539
+ L ++ Y E + G+ + G+ GGSS++ ++Y RG + DYE +
Sbjct: 96 ANLCDDRYNWCYHTEVQR----GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQ 151
Query: 540 KLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETS 599
+ G GW Y L YF K++ + S+ G G P+ + + K N+ + F +
Sbjct: 152 RQGARGWDYAHCLPYFRKAQGHE---LGASR-YRGADG--PLRVSRGKTNHPLHCAFLEA 205
Query: 600 AQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVT 659
Q+ GYP +DMN + GF + G R+SAA AYL P A RTNL + V+
Sbjct: 206 TQQAGYPLTEDMNG-FQQEGFGWMDMTIHEGKRWSAACAYLHP-ALSRTNLKAEAETLVS 263
Query: 660 KVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
+V+ A GVEYV + G++ R A+KEVIL+ GAI + QLL+LSGIG L ++ I
Sbjct: 264 RVLFEGTR-AVGVEYVKN-GQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGI 321
Query: 720 P 720
P
Sbjct: 322 P 322
>sp|Q88CW6|BETA_PSEPK Choline dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betA
PE=3 SV=1
Length = 565
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 157/294 (53%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD IIVGA +AG LA RL+E + + VLL+EAGG +++P + L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + + R++ GKGLGGSS + + Y RG + D++ +A+L G W Y
Sbjct: 65 AYETDPEPY----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTY 120
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVTTPKAGNNPLFHAMVEAGVQA-GYPRT 175
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
+D+N Y GF + +T+ G R S A YL A KR NL ++ + +V+ D
Sbjct: 176 EDLNG-YQQEGFGPMDRTVTKNGRRSSTARGYLDQ-AKKRPNLTIVTHALTDRVLF-DGK 232
Query: 668 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y V E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IP
Sbjct: 233 RAIGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIP 286
>sp|B0KN19|BETA_PSEPG Choline dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betA
PE=3 SV=1
Length = 565
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD IIVGA +AG LA RL+E + + VLL+EAGG +++P + L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + R++ GKGLGGSS + + Y RG + D++ +A+L G W Y
Sbjct: 65 AYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLQDWTY 120
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVATPKAGNNPLFHAMVEAGVQA-GYPRT 175
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
+D+N Y GF + +T+ G R S A YL A KR NL ++ + +V+ D
Sbjct: 176 EDLNG-YQQEGFGPMDRSVTKNGRRSSTARGYLDQ-AKKRPNLTIVTHALSDRVLF-DGK 232
Query: 668 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y V E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IP
Sbjct: 233 RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIP 286
>sp|C3K3D3|BETA_PSEFS Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25)
GN=betA PE=3 SV=1
Length = 567
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 153/294 (52%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
+D IIVGA +AG LA RL+E + VLL+EAGG +++P + L ++
Sbjct: 5 YDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 64
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + R++ GKGLGGSS + + Y RG + DY+N+AKL G W Y
Sbjct: 65 AYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLENWTY 120
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVTTPKAGNNPLFHAMVEAGVQA-GYPRT 175
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T+ G R S A YL A KR+ L ++ + KV+ +
Sbjct: 176 DDLNG-YQQEGFGPMDRTVTKNGRRASTARGYLD-TAKKRSTLTIVTHALTDKVLFEGKR 233
Query: 668 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y + + E V A KEV++ +GAIA+ QLL SG+GP L+ + IP
Sbjct: 234 -AVGVRYLIGAAEERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIP 286
>sp|A6U6Y8|BETA_SINMW Choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419)
GN=betA PE=3 SV=1
Length = 549
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 156/287 (54%), Gaps = 17/287 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D +I+G+ +AG LA RLSE + V+++E GG P ++ +S++ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG S D++ + +LG GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDRWEELGAKGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
Y+ + E + + GT G P+ + + N + F + ++ G+ +D N
Sbjct: 120 PYYKRMEHS----HGGEEGWRGTDG--PLHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
+ GF + T G R+SAA AYL P A KR N+ ++ R K++I + ATGV
Sbjct: 174 GSKQE-GFGLMEQTTWRGRRWSAASAYLRP-ALKRPNVELV-RCFARKIVIENGR-ATGV 229
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
E + G T V AN+EVI++A + + +LL+LSGIGP AHL E+ I
Sbjct: 230 E-IERGGRTEVVRANREVIVSASSFNSPKLLMLSGIGPAAHLQEMGI 275
>sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3
SV=1
Length = 528
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 152/287 (52%), Gaps = 14/287 (4%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG-GDTPIHSRIPGMSSVLSLSEFDHAYLA 493
D ++VG +AG V+A+RLS + V+ +EAG D +P S L SE D YL
Sbjct: 6 DYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDYLT 65
Query: 494 EPS-QFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
EP + G + R GK LGGSS++ +++ RG + DY+ +A W Y + L
Sbjct: 66 EPQPELDGREIYWPR-----GKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADVL 120
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E+ + + S G G P+ + + + + + +A+E G+ + +
Sbjct: 121 GYFRRIENVTAAWHFVSGDDSGVTG--PLHISRQRSPRSVTAAWLAAARECGFAAARPNS 178
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
R GF E R G RFS ADAYL P A +R NL VL + T+V+I D + A GV
Sbjct: 179 PR--PEGFCETVVTQRRGARFSTADAYLKP-AMRRKNLRVLTGATATRVVI-DGDRAVGV 234
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
EY S G+T V A +EV+L AGA+ + QLL+LSGIG + HL E I
Sbjct: 235 EY-QSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDI 280
>sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316
OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1
Length = 528
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 152/287 (52%), Gaps = 14/287 (4%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG-GDTPIHSRIPGMSSVLSLSEFDHAYLA 493
D ++VG +AG V+A+RLS + V+ +EAG D +P S L SE D YL
Sbjct: 6 DYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDYLT 65
Query: 494 EPS-QFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
EP + G + R GK LGGSS++ +++ RG + DY+ +A W Y + L
Sbjct: 66 EPQPELDGREIYWPR-----GKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADVL 120
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E+ + + S G G P+ + + + + + +A+E G+ + +
Sbjct: 121 GYFRRIENVTAAWHFVSGDDSGVTG--PLHISRQRSPRSVTAAWLAAARECGFAAARPNS 178
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
R GF E R G RFS ADAYL P A +R NL VL + T+V+I D + A GV
Sbjct: 179 PR--PEGFCETVVTQRRGARFSTADAYLKP-AMRRKNLRVLTGATATRVVI-DGDRAVGV 234
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
EY S G+T V A +EV+L AGA+ + QLL+LSGIG + HL E I
Sbjct: 235 EY-QSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDI 280
>sp|Q4K4K7|BETA_PSEF5 Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=betA PE=3 SV=1
Length = 567
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 155/294 (52%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
+D IIVGA +AG LA RL+E + VLL+EAGG +++P + L ++
Sbjct: 5 YDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + R++ GKGLGGSS + + Y RG + DY+ +AKL G W Y
Sbjct: 65 AYETDPEPH----MNGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDWTY 120
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVTTPKAGNNPLFHAMVEAGVQA-GYPRT 175
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
+D+N Y GF + +T G R S A YL A KR+ L ++ + K++ +
Sbjct: 176 EDLNG-YQQEGFGPMDRTVTPKGRRASTARGYLD-TAKKRSTLTIVTHALTDKILFEGKR 233
Query: 668 VATGVEYV-NSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y+ S E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IP
Sbjct: 234 -AVGVSYLQGSTEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIP 286
>sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3
SV=1
Length = 549
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 154/287 (53%), Gaps = 17/287 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D II+G+ +AG LA+RLSE S V+++E GG P ++ +S++ ++ YL
Sbjct: 4 DYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG + D++ + +LG GW Y + L
Sbjct: 64 SEPEPH----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E + GT G P+ + + N + F + ++ G+ D N
Sbjct: 120 PYFKRMEHS----HGGEDGWRGTDG--PLHVQRGPVKNPLFHAFVEAGKQAGFEMTDDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
+ GF + T G R+SAA AYL P A KR N+ ++ R K++I + ATGV
Sbjct: 174 GSKQE-GFGLMEQTTWRGRRWSAASAYLKP-ALKRPNVQLI-RCFARKIVIENGR-ATGV 229
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
E + G V AN+EVI++A + + +LL+LSGIGP AHL ++ I
Sbjct: 230 E-IERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDLGI 275
>sp|C6DKY4|BETA_PECCP Choline dehydrogenase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=betA PE=3 SV=1
Length = 559
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 153/294 (52%), Gaps = 21/294 (7%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
+D II+GA +AG VLA RL+E S + VLL+EAGG +++P + L ++
Sbjct: 3 YDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + N R++ GKGLGGSS + + Y RG + D++N+A + G W Y
Sbjct: 63 AYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPGLEDWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYFRKAET-RDVGSND---YHGATGPVSVATPKMGNNELFHAMVEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL G R NL ++ + K++ +
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPKGRRASTARGYLDQAKG-RKNLTIVTHALTDKILFEGKR 231
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y KGE+ V A +EV+L AGAIA+ Q+L SG+GPK L + IP
Sbjct: 232 -AVGVAYF--KGESPQTVQARREVLLCAGAIASPQILQRSGVGPKDLLQGLDIP 282
>sp|Q2KB43|BETA_RHIEC Choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=betA PE=3 SV=1
Length = 549
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 153/287 (53%), Gaps = 17/287 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D +I+G+ +AG LA RLSE VL+IEAGG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG +GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E + + GT G P+ + + N + F + ++ G+ +D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
+ GF + G R+SAA+AYL P A KR N+ ++ + + I+ + ATGV
Sbjct: 174 GSKQE-GFGLMEQTIFAGRRWSAANAYLKP-ALKRDNVGIV--YGLARRIVIENGRATGV 229
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
E + G T V AN+EVI++A + + +LL+LSGIGP HL E+ I
Sbjct: 230 E-IERGGRTEVVKANREVIVSASSFNSPKLLMLSGIGPAKHLKEMGI 275
>sp|Q3K5H3|BETA_PSEPF Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1)
GN=betA PE=3 SV=1
Length = 567
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 152/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD IIVGA +AG LA RL+E + VLL+EAGG +++P + L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + R++ GKGLGGSS + + Y RG + DY+ +AKL G W Y
Sbjct: 65 AYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDWSY 120
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGDGPVSVTTPKAGNNPLFHAMVEAGVQA-GYPRT 175
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
+D+N Y GF + +T G R S A YL +A KR+ L ++ + KV+ +
Sbjct: 176 EDLNG-YQQEGFGPMDRTVTPNGRRASTARGYLD-VAKKRSTLTIVTHALTDKVLFEGKR 233
Query: 668 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y V + E V A KEVI+ +GAIA+ QLL SG+GP L+ + IP
Sbjct: 234 -AVGVRYLVGAAEERVEARARKEVIVCSGAIASPQLLQRSGVGPAKLLESLDIP 286
>sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA
PE=3 SV=2
Length = 549
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 153/287 (53%), Gaps = 17/287 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D +I+G+ +AG LA RLSE V+++E GG P ++ +S++ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG S D+ + +LG GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
Y+ + E + + GT G P+ + + N + F + +E G+ +D N
Sbjct: 120 PYYKRMEHS----HGGEEGWRGTDG--PLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
+ GF + T G R+SAA AYL P A KR N+ ++ R K++I + ATGV
Sbjct: 174 GSKQE-GFGLMEQTTWRGRRWSAASAYLRP-ALKRPNVELI-RCFARKIVIENGR-ATGV 229
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
E + G V AN+EVI++A + + +LL+LSGIGP AHL E+ I
Sbjct: 230 E-IERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKEMGI 275
>sp|B7N8L3|BETA_ECOLU Choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=betA PE=3 SV=1
Length = 556
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 151/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T +G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGSAELLAEFDIP 284
>sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=betA PE=3 SV=1
Length = 549
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 152/287 (52%), Gaps = 17/287 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D +I+G+ +AG +A+RLSE V+++E GG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG GW Y + L
Sbjct: 64 SEPEP----QLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E + + GT G P+ + + N + F + ++ G+ +D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVRRGDARNPLFHAFIEAGKQAGFEATEDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
+ GF + T G R+SAA AYL P A KR N+ ++ R KV+I + ATGV
Sbjct: 174 GGKQE-GFGLMEQTTWMGRRWSAATAYLKP-ALKRPNVELI-RCFARKVVIENGR-ATGV 229
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
E + G+ V AN EVI++A + + +LL+LSGIGP HL E+ I
Sbjct: 230 E-IERGGKIEIVKANSEVIVSASSFNSPKLLMLSGIGPGQHLQEMGI 275
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+AK G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDCK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+AK G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDCK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|B1LIJ7|BETA_ECOSM Choline dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=betA PE=3 SV=1
Length = 562
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 151/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T +G R S A YL A R+NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRSNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R ANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAGLLAEFDIP 284
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 153/293 (52%), Gaps = 19/293 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + + VLL+EAGG +++P + L ++
Sbjct: 5 FDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 64
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + N R++ GKGLGGSS + + Y RG + D++N+AK G W Y
Sbjct: 65 AYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGLEDWTY 120
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 121 HDCLPYFRKAES-RDIGPND---YHGGDGPVSVTTPKAGNNPLFHAMVEAGVQA-GYPRT 175
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A +R NL ++ + +++ D
Sbjct: 176 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-ARERPNLTIVTHATTDRILF-DGK 232
Query: 668 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
A+GV Y + + + A +EV+L AGAIA+ Q+L SG+GP A L E+ I
Sbjct: 233 RASGVSYLIGNANDATEARARREVLLCAGAIASPQILQRSGVGPAALLRELDI 285
>sp|B5ZUG2|BETA_RHILW Choline dehydrogenase OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=betA PE=3 SV=1
Length = 549
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 152/287 (52%), Gaps = 17/287 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D +I+G+ +AG LA RLSE VL+IEAGG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E + + GT G P+ + + N + F + ++ G+ +D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
+ GF + G R+SAA+AYL P A KR N+ ++ +++I D ATGV
Sbjct: 174 GSKQE-GFGLMEQTIFSGRRWSAANAYLKP-ALKRKNVEIIY-GFAQRIVIEDGR-ATGV 229
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
E + G+ V AN+EVI++A + + +LL+LSGIGP HL E+ I
Sbjct: 230 E-IERGGKIEVVKANREVIVSASSFNSPKLLMLSGIGPGEHLKEMGI 275
>sp|B4SHV9|BETA_STRM5 Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
R551-3) GN=betA PE=3 SV=1
Length = 560
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 155/292 (53%), Gaps = 19/292 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
+D II+GA +AG VLA RL+E + + VLL+EAGG +++P + L ++
Sbjct: 7 YDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 66
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P F + N R+ GKGLGGSS + + Y RG + DY+N+A + G W Y
Sbjct: 67 AYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLEDWTY 122
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG +G L V K N + + E Q GYP
Sbjct: 123 LDCLPYFRKAET-RDIGPND---YHGGEGPLRVTTPKAGNNELFAAMVEAGVQA-GYPRT 177
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL +A R NL ++ + +++ + +
Sbjct: 178 DDLNG-YQQEGFGPMDRTVTPKGRRSSTARGYLD-LAKPRPNLTIVTHALTDRILFSGKR 235
Query: 668 VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
A GV+++++ + R TA +EV+L GAIA+ Q+L SG+GP L + I
Sbjct: 236 -AVGVQWLHND-QPQRATARREVLLCGGAIASPQILQRSGVGPADLLRSLDI 285
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 150/287 (52%), Gaps = 17/287 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D +IVG+ +AG +A RLSE V++IEAGG P ++ +S+ ++ YL
Sbjct: 4 DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG GW Y + L
Sbjct: 64 SEPEP----NLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E + + GT G P+ + + +N + F + + G+ D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
+ GF + G R+SAA+AYL P A KR N+ L KVII + A GV
Sbjct: 174 GSKQE-GFGLMEQTIHNGRRWSAANAYLKP-ALKRGNV-TLVNGFARKVIIENGR-AVGV 229
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
E + +G V AN+EVI++A + + +LL+LSGIGP AHL ++ I
Sbjct: 230 E-IERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGI 275
>sp|Q9L4K0|BETA2_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=1 SV=1
Length = 558
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 154/293 (52%), Gaps = 19/293 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIP-GMSSVLSLSEFDH 489
FD II+GA +AG VLA RL+E S + VLL+EAGG +++P ++ L ++
Sbjct: 7 FDYIIIGAGSAGNVLATRLTEDSDVSVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 66
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
A+ +P + N R++ GKGLGGSS + + Y RG + DY+++AK G W Y
Sbjct: 67 AFETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDHWAKQPGLEEWDY 122
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
L YF KSE R + N+ HG G + V K N + R E Q GYP
Sbjct: 123 LSCLPYFKKSET-RDIGPND---YHGGDGPVSVTTPKAGNNPLYRTFIEAGKQ-AGYPET 177
Query: 609 KDMNDRYVDVGFAELPG-MTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
+D+N Y GF + +T G R S A YL A +R+NL + R+ VT VI +
Sbjct: 178 EDVNG-YQQEGFGPMDRFVTPKGRRASTARGYLD-TAKQRSNLTIETRA-VTDVIEFEGK 234
Query: 668 VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GV Y KG+ + A +EV+L GAIA+ Q+L SG+G L E+ IP
Sbjct: 235 RAVGVRY-EQKGQPKQARARREVLLCGGAIASPQILQRSGVGNPEWLKELGIP 286
>sp|B6I074|BETA_ECOSE Choline dehydrogenase OS=Escherichia coli (strain SE11) GN=betA
PE=3 SV=1
Length = 556
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|A7ZWV4|BETA_ECOHS Choline dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betA
PE=3 SV=1
Length = 556
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|B7M2V5|BETA_ECO8A Choline dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betA
PE=3 SV=1
Length = 556
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|B7L439|BETA_ECO55 Choline dehydrogenase OS=Escherichia coli (strain 55989 / EAEC)
GN=betA PE=3 SV=1
Length = 556
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|A7ZI50|BETA_ECO24 Choline dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=betA PE=3 SV=1
Length = 556
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|Q1MJU4|BETA_RHIL3 Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=betA PE=3 SV=1
Length = 549
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 153/287 (53%), Gaps = 17/287 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D +I+G+ +AG LA RLSE V++IEAGG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG +GW Y + L
Sbjct: 64 SEPEA----NLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E + + GT G P+ + + N + + F + ++ G+ +D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 672
+ GF + G R+SAA+AYL P A KR N+ ++ +++I D ATGV
Sbjct: 174 GSKQE-GFGLMEQTIFGGRRWSAANAYLKP-ALKRDNVKIVY-GLAQRIVIEDGR-ATGV 229
Query: 673 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
E + G V AN+EVI++A + + +LL+LSGIGP HL ++ I
Sbjct: 230 E-IERNGRIEVVKANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGI 275
>sp|B2FQ89|BETA_STRMK Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
K279a) GN=betA PE=3 SV=1
Length = 560
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 19/292 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
+D II+GA +AG VLA RL+E + + VLL+EAGG +++P + L ++
Sbjct: 7 YDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 66
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P F + N R+ GKGLGGSS + + Y RG + DY+N+A + G W Y
Sbjct: 67 AYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLEDWTY 122
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG G L V K N + + E Q GYP
Sbjct: 123 LDCLPYFRKAET-RDIGPND---YHGGDGPLRVTTPKAGNNELFAAMVEAGVQA-GYPRT 177
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL +A R NL ++ + +++ + +
Sbjct: 178 DDLNG-YQQEGFGPMDRTVTPKGRRSSTARGYLD-LAKPRPNLTIVTHALTDRILFSGKR 235
Query: 668 VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
A GV+++ + + R TA +EV+L GAIA+ Q+L SG+GP L + I
Sbjct: 236 -AVGVQWLRND-QPQRATARREVLLCGGAIASPQILQRSGVGPADLLRSLDI 285
>sp|Q0T7N0|BETA_SHIF8 Choline dehydrogenase OS=Shigella flexneri serotype 5b (strain
8401) GN=betA PE=3 SV=1
Length = 556
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|A8GBX9|BETA_SERP5 Choline dehydrogenase OS=Serratia proteamaculans (strain 568)
GN=betA PE=3 SV=1
Length = 555
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 154/293 (52%), Gaps = 19/293 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
+D II+GA +AG VLA RL+E + + VLL+EAGG +++P + L ++
Sbjct: 3 YDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRMDFRTQMPAALAFPLQGRRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + N R++ GKGLGGSS + + Y RG + D++N+AK G W Y
Sbjct: 63 AYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWAKAPGLEDWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYFRKAET-RDIGPND---FHGGDGPVSVTTPKAGNNELFHAMVEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
+D+N Y GF + +T G R S A YL A R NL ++ + +T I D
Sbjct: 174 EDLNG-YQQEGFGPMDRTVTPKGRRASTARGYLDQ-ARSRPNLKIVTHA-LTDRIRFDGK 230
Query: 668 VATGVEYVNSKGETVR-VTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
A GV+Y+ + + V A +EV+L AGAIA+ Q+L SG+GP A L+ + I
Sbjct: 231 RAVGVDYLQGEAKDVTSARARREVLLCAGAIASPQILQRSGVGPAALLNRLDI 283
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 154/295 (52%), Gaps = 17/295 (5%)
Query: 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG------GDTPIHSRIPGMSSVLSLS 485
D + I+VGA +AGCVLANRL+E + +VLL+EAG G + +I M + L +
Sbjct: 44 DEYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIH-MPAALVAN 102
Query: 486 EFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNG 545
D Y A G+ + G+ GGSS++ ++Y RG + DY + + G G
Sbjct: 103 LCDDKYNWYYHTEAQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEG 162
Query: 546 WGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGY 605
W Y L YF K++ + E A G P+ + + K N+ + + F +A++ GY
Sbjct: 163 WDYAHCLPYFRKAQKH------ELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGY 216
Query: 606 PCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND 665
P +DMN + GF + G R+S A AYL P A R NL ++ V++V+
Sbjct: 217 PFTEDMNG-FQQEGFGWMDMTIHQGKRWSTASAYLRP-ALSRPNLRAEVQTLVSRVLFEG 274
Query: 666 QNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVEY+ G++ + ++EVIL+ GAI + QLL+LSG+G L ++ IP
Sbjct: 275 TR-AVGVEYIKD-GQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIP 327
>sp|P17444|BETA_ECOLI Choline dehydrogenase OS=Escherichia coli (strain K12) GN=betA PE=1
SV=1
Length = 556
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDMGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|B1J0W6|BETA_ECOLC Choline dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=betA PE=3 SV=1
Length = 556
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDMGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|B1XE52|BETA_ECODH Choline dehydrogenase OS=Escherichia coli (strain K12 / DH10B)
GN=betA PE=3 SV=1
Length = 556
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDMGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|B3PTE0|BETA_RHIE6 Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA
PE=3 SV=1
Length = 549
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 153/290 (52%), Gaps = 23/290 (7%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD--TPIHSRIPGMSSVLSLSEFDHAYL 492
D +I+G+ +AG LA RLSE VL+IEAGG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 493 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 552
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG +GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVL 119
Query: 553 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 612
YF + E + + GT G P+ + + N + F + ++ G+ D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYN 173
Query: 613 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTN---LYVLKRSKVTKVIINDQNVA 669
+ GF + G R+SAA+AYL P A KR N +Y L R K++I D A
Sbjct: 174 GSKQE-GFGLMEQTIFSGRRWSAANAYLKP-ALKRKNVGMVYGLAR----KIVIEDGR-A 226
Query: 670 TGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
TGVE + G+ V A +EVI++A + + +LL+LSGIGP HL+++ I
Sbjct: 227 TGVE-IERGGKVEVVKATREVIVSASSFNSPKLLMLSGIGPGQHLNDMGI 275
>sp|B7UJG4|BETA_ECO27 Choline dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=betA PE=3 SV=1
Length = 556
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 150/294 (51%), Gaps = 19/294 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
FD II+GA +AG VLA RL+E + VLL+EAGG +++P + L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVITSKPGVNPLFEAMIEAGMQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T +G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 668 VATGVEYVNSKGET-VRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
A GVE++ R ANKEV+L AGAIA+ Q+L SG+G L E IP
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 153/293 (52%), Gaps = 21/293 (7%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSV-LSLSEFDH 489
+D II+GA +AG VLA RL+E S + VLL+EAGG +++P + L ++
Sbjct: 3 YDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 62
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 548
AY +P + + R++ GKGLGGSS + + Y RG + D++++A + G W Y
Sbjct: 63 AYETDPEPH----MNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDWSY 118
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
+ L YF K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYFRKAET-RDVGAND---YHGASGPVSVTTPKMGNNELFHAMVEAGVQA-GYPRT 173
Query: 609 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 667
D+N Y GF + +T G R S A YL A R NL ++ + +T I+ D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPKGRRASTARGYLDQ-AKSRKNLTIVTHA-LTDRILFDGK 230
Query: 668 VATGVEYVNSKGETVRVT-ANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
A GV Y KGE+ + A +EV+L AGAIA+ Q+L SG+GPK L + I
Sbjct: 231 RAVGVAYF--KGESAQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDI 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 307,374,373
Number of Sequences: 539616
Number of extensions: 15138562
Number of successful extensions: 38061
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 531
Number of HSP's that attempted gapping in prelim test: 32804
Number of HSP's gapped (non-prelim): 2754
length of query: 720
length of database: 191,569,459
effective HSP length: 125
effective length of query: 595
effective length of database: 124,117,459
effective search space: 73849888105
effective search space used: 73849888105
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)