Query psy14408
Match_columns 720
No_of_seqs 250 out of 1767
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 19:06:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14408.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14408hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 1.1E-37 3.6E-42 355.6 16.5 280 433-720 2-298 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 8.3E-37 2.8E-41 349.3 24.0 282 430-720 16-315 (583)
3 3t37_A Probable dehydrogenase; 100.0 2.9E-34 1E-38 319.8 21.6 280 428-720 12-293 (526)
4 1gpe_A Protein (glucose oxidas 100.0 2.9E-34 9.9E-39 328.1 21.2 280 431-720 22-319 (587)
5 3q9t_A Choline dehydrogenase a 100.0 2.8E-34 9.5E-39 328.1 15.3 275 431-720 4-292 (577)
6 2jbv_A Choline oxidase; alcoho 100.0 1E-32 3.4E-37 312.7 20.5 277 432-720 12-295 (546)
7 1ju2_A HydroxynitrIle lyase; f 99.9 4.1E-27 1.4E-31 266.2 13.0 266 408-720 8-283 (536)
8 1coy_A Cholesterol oxidase; ox 99.9 2.5E-26 8.6E-31 257.8 18.4 260 428-709 6-305 (507)
9 1n4w_A CHOD, cholesterol oxida 99.9 5.4E-26 1.8E-30 254.8 19.8 257 432-709 4-300 (504)
10 1kdg_A CDH, cellobiose dehydro 99.9 3.9E-25 1.3E-29 249.2 13.2 260 431-717 5-280 (546)
11 3pl8_A Pyranose 2-oxidase; sub 99.6 2.9E-16 9.8E-21 180.9 11.6 87 632-720 252-346 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.6 3.9E-15 1.3E-19 166.6 19.7 64 638-703 206-270 (510)
13 3dme_A Conserved exported prot 99.6 4.2E-15 1.4E-19 155.2 12.8 65 639-709 155-220 (369)
14 3nyc_A D-arginine dehydrogenas 99.6 1.6E-14 5.5E-19 152.1 14.8 61 639-709 159-219 (381)
15 1y56_B Sarcosine oxidase; dehy 99.6 6.8E-14 2.3E-18 148.4 17.8 62 639-709 154-215 (382)
16 2gag_B Heterotetrameric sarcos 99.5 1E-13 3.4E-18 147.7 17.8 62 639-709 179-240 (405)
17 1qo8_A Flavocytochrome C3 fuma 99.5 2.3E-13 7.8E-18 154.3 16.9 61 638-701 254-315 (566)
18 3dje_A Fructosyl amine: oxygen 99.5 1.5E-13 5.1E-18 149.1 14.6 58 639-704 166-226 (438)
19 1y0p_A Fumarate reductase flav 99.5 5.1E-13 1.7E-17 151.5 19.0 61 638-701 259-320 (571)
20 2oln_A NIKD protein; flavoprot 99.5 8.2E-13 2.8E-17 141.3 17.5 35 433-468 4-38 (397)
21 2gf3_A MSOX, monomeric sarcosi 99.5 8.1E-13 2.8E-17 139.9 16.2 36 433-469 3-38 (389)
22 3axb_A Putative oxidoreductase 99.4 2.1E-13 7.1E-18 148.6 11.8 35 431-466 21-56 (448)
23 4dgk_A Phytoene dehydrogenase; 99.4 2.6E-13 9E-18 149.5 12.2 61 638-705 225-285 (501)
24 3da1_A Glycerol-3-phosphate de 99.4 7.8E-13 2.7E-17 150.3 16.0 67 638-709 175-242 (561)
25 2rgh_A Alpha-glycerophosphate 99.4 9.8E-13 3.3E-17 149.8 16.5 67 638-709 193-260 (571)
26 1pj5_A N,N-dimethylglycine oxi 99.4 1.8E-12 6.2E-17 153.3 17.9 62 639-709 156-217 (830)
27 2bs2_A Quinol-fumarate reducta 99.4 5.1E-12 1.7E-16 146.7 19.9 50 647-698 170-220 (660)
28 2h88_A Succinate dehydrogenase 99.4 6.9E-12 2.3E-16 144.6 20.5 58 639-699 160-218 (621)
29 2wdq_A Succinate dehydrogenase 99.4 7E-12 2.4E-16 143.4 20.2 58 639-698 148-206 (588)
30 2uzz_A N-methyl-L-tryptophan o 99.4 3.3E-12 1.1E-16 134.7 15.1 36 433-469 2-37 (372)
31 1d4d_A Flavocytochrome C fumar 99.4 1.8E-11 6.2E-16 139.3 21.1 64 638-704 259-324 (572)
32 1ryi_A Glycine oxidase; flavop 99.3 1.3E-12 4.6E-17 138.2 9.2 62 638-709 168-229 (382)
33 3ps9_A TRNA 5-methylaminomethy 99.3 2E-12 6.7E-17 149.5 10.9 36 433-469 272-307 (676)
34 2qcu_A Aerobic glycerol-3-phos 99.3 1.8E-11 6.2E-16 136.6 18.2 62 638-705 154-216 (501)
35 2i0z_A NAD(FAD)-utilizing dehy 99.3 8.5E-12 2.9E-16 137.2 14.3 64 639-709 139-211 (447)
36 1jnr_A Adenylylsulfate reducta 99.3 3.1E-11 1.1E-15 139.4 19.2 59 638-699 155-219 (643)
37 1kf6_A Fumarate reductase flav 99.3 7.2E-11 2.4E-15 135.5 21.0 58 639-699 139-198 (602)
38 3gyx_A Adenylylsulfate reducta 99.3 2.6E-11 8.8E-16 140.9 17.4 48 649-698 182-233 (662)
39 3pvc_A TRNA 5-methylaminomethy 99.3 5E-12 1.7E-16 146.7 11.4 37 432-469 263-299 (689)
40 3oz2_A Digeranylgeranylglycero 99.3 1.6E-11 5.6E-16 128.8 13.9 69 635-709 103-171 (397)
41 1chu_A Protein (L-aspartate ox 99.3 1.4E-11 4.8E-16 139.5 13.1 51 647-698 151-208 (540)
42 1twf_A B220, DNA-directed RNA 99.3 4.7E-13 1.6E-17 167.4 0.0 19 159-177 1634-1652(1733)
43 3ka7_A Oxidoreductase; structu 99.3 9.5E-12 3.2E-16 133.8 9.5 59 638-704 200-258 (425)
44 3cgv_A Geranylgeranyl reductas 99.2 6.4E-11 2.2E-15 125.5 15.4 69 636-710 104-172 (397)
45 3v76_A Flavoprotein; structura 99.2 7.1E-11 2.4E-15 129.8 12.4 37 432-469 26-62 (417)
46 1rp0_A ARA6, thiazole biosynth 99.2 5.6E-10 1.9E-14 115.5 17.8 66 639-707 125-205 (284)
47 3nlc_A Uncharacterized protein 99.2 2.2E-10 7.5E-15 130.4 15.8 65 638-709 224-290 (549)
48 2e5v_A L-aspartate oxidase; ar 99.1 5.3E-10 1.8E-14 124.4 16.6 53 639-698 124-176 (472)
49 3nix_A Flavoprotein/dehydrogen 99.1 3.7E-10 1.3E-14 121.2 14.5 68 636-709 108-175 (421)
50 3nrn_A Uncharacterized protein 99.1 6.2E-10 2.1E-14 120.2 16.1 37 435-472 2-38 (421)
51 3e1t_A Halogenase; flavoprotei 99.1 5E-10 1.7E-14 125.2 14.9 59 636-697 113-171 (512)
52 3p1w_A Rabgdi protein; GDI RAB 99.1 3.4E-10 1.2E-14 126.8 11.9 41 431-472 18-58 (475)
53 3c4n_A Uncharacterized protein 99.1 2.8E-10 9.7E-15 123.1 10.5 37 432-468 35-72 (405)
54 2gqf_A Hypothetical protein HI 99.1 5.2E-10 1.8E-14 122.0 11.9 36 432-468 3-38 (401)
55 3i3l_A Alkylhalidase CMLS; fla 99.1 1.4E-09 4.7E-14 124.8 15.9 68 636-709 130-197 (591)
56 2bcg_G Secretory pathway GDP d 99.0 3.1E-10 1.1E-14 125.1 9.4 40 432-472 10-49 (453)
57 3jsk_A Cypbp37 protein; octame 99.0 5.4E-09 1.9E-13 112.7 17.4 37 432-468 78-115 (344)
58 2gmh_A Electron transfer flavo 99.0 1.2E-09 4.1E-14 124.7 12.5 73 635-709 145-230 (584)
59 3atr_A Conserved archaeal prot 99.0 1.6E-09 5.6E-14 118.8 13.0 58 638-698 104-162 (453)
60 3ihg_A RDME; flavoenzyme, anth 99.0 1.1E-08 3.6E-13 114.7 18.1 36 432-468 4-39 (535)
61 3lxd_A FAD-dependent pyridine 99.0 7.8E-09 2.7E-13 112.0 15.8 66 638-710 198-263 (415)
62 3fmw_A Oxygenase; mithramycin, 98.9 5.8E-09 2E-13 118.9 14.6 36 432-468 48-83 (570)
63 4gde_A UDP-galactopyranose mut 98.9 2.3E-09 8E-14 117.8 10.7 42 431-472 8-49 (513)
64 3itj_A Thioredoxin reductase 1 98.9 1.6E-09 5.6E-14 111.7 8.6 67 639-709 214-281 (338)
65 2x3n_A Probable FAD-dependent 98.9 5.7E-09 2E-13 111.7 13.1 35 432-467 5-39 (399)
66 3k7m_X 6-hydroxy-L-nicotine ox 98.9 4.3E-09 1.5E-13 113.5 12.1 38 434-472 2-39 (431)
67 3i6d_A Protoporphyrinogen oxid 98.9 1.7E-08 5.7E-13 109.3 15.9 39 433-472 5-49 (470)
68 2gjc_A Thiazole biosynthetic e 98.9 2.4E-08 8.4E-13 106.8 16.6 38 431-468 63-101 (326)
69 3kkj_A Amine oxidase, flavin-c 98.9 1.3E-09 4.4E-14 103.6 5.3 38 432-470 1-38 (336)
70 3f8d_A Thioredoxin reductase ( 98.9 7.9E-09 2.7E-13 105.7 11.5 67 639-709 195-262 (323)
71 3fg2_P Putative rubredoxin red 98.9 2.5E-08 8.7E-13 107.7 16.1 66 638-710 188-253 (404)
72 2cul_A Glucose-inhibited divis 98.9 1.9E-08 6.7E-13 100.8 13.8 34 432-466 2-35 (232)
73 1d5t_A Guanine nucleotide diss 98.8 5.2E-09 1.8E-13 114.8 10.0 40 432-472 5-44 (433)
74 3qj4_A Renalase; FAD/NAD(P)-bi 98.8 5.1E-09 1.7E-13 109.9 8.3 35 434-469 2-39 (342)
75 4a9w_A Monooxygenase; baeyer-v 98.8 1.4E-08 4.7E-13 105.2 11.3 36 432-468 2-37 (357)
76 1yvv_A Amine oxidase, flavin-c 98.8 8.2E-09 2.8E-13 107.0 9.6 36 433-469 2-37 (336)
77 2qa1_A PGAE, polyketide oxygen 98.8 3.5E-08 1.2E-12 110.4 15.4 40 428-468 6-45 (500)
78 2zxi_A TRNA uridine 5-carboxym 98.8 1.6E-08 5.4E-13 116.8 12.9 52 638-697 127-179 (637)
79 3rp8_A Flavoprotein monooxygen 98.8 1.3E-08 4.5E-13 109.3 11.5 39 428-467 18-56 (407)
80 3nks_A Protoporphyrinogen oxid 98.8 6.7E-09 2.3E-13 113.4 9.3 38 434-472 3-42 (477)
81 1k0i_A P-hydroxybenzoate hydro 98.8 8.1E-09 2.8E-13 110.2 9.6 34 433-467 2-35 (394)
82 3g3e_A D-amino-acid oxidase; F 98.8 1.8E-10 6.3E-15 121.2 -3.4 32 435-467 2-39 (351)
83 3ces_A MNMG, tRNA uridine 5-ca 98.8 1.6E-08 5.4E-13 117.1 12.3 34 432-466 27-60 (651)
84 3lov_A Protoporphyrinogen oxid 98.8 4.1E-08 1.4E-12 107.5 14.3 39 432-471 3-43 (475)
85 1mo9_A ORF3; nucleotide bindin 98.8 1.1E-07 3.7E-12 106.8 18.0 69 638-709 259-328 (523)
86 2ivd_A PPO, PPOX, protoporphyr 98.8 8.2E-09 2.8E-13 112.9 8.7 42 430-472 13-54 (478)
87 3o0h_A Glutathione reductase; 98.8 2.6E-08 9E-13 110.4 12.7 63 639-709 237-301 (484)
88 2qa2_A CABE, polyketide oxygen 98.8 5.6E-08 1.9E-12 108.8 15.3 38 430-468 9-46 (499)
89 2weu_A Tryptophan 5-halogenase 98.7 5.9E-08 2E-12 107.8 13.5 58 635-700 174-231 (511)
90 2bry_A NEDD9 interacting prote 98.7 1.6E-08 5.3E-13 113.3 8.8 37 431-468 90-126 (497)
91 3r9u_A Thioredoxin reductase; 98.7 2.5E-08 8.6E-13 101.8 9.4 63 639-704 188-250 (315)
92 3cp8_A TRNA uridine 5-carboxym 98.7 2.3E-08 7.8E-13 115.7 10.0 36 430-466 18-53 (641)
93 1s3e_A Amine oxidase [flavin-c 98.7 1.7E-08 5.9E-13 112.4 8.2 39 433-472 4-42 (520)
94 2vvm_A Monoamine oxidase N; FA 98.7 1E-07 3.5E-12 105.0 14.3 39 433-472 39-77 (495)
95 3ab1_A Ferredoxin--NADP reduct 98.7 1E-08 3.5E-13 108.0 6.0 67 640-709 208-274 (360)
96 2aqj_A Tryptophan halogenase, 98.7 9.3E-08 3.2E-12 107.4 13.9 35 432-467 4-41 (538)
97 3urh_A Dihydrolipoyl dehydroge 98.7 1.7E-07 5.7E-12 104.0 15.8 68 638-709 243-313 (491)
98 3lad_A Dihydrolipoamide dehydr 98.7 4.6E-07 1.6E-11 99.9 18.5 37 432-469 2-38 (476)
99 2vou_A 2,6-dihydroxypyridine h 98.7 1.3E-07 4.5E-12 101.5 13.8 35 432-467 4-38 (397)
100 3alj_A 2-methyl-3-hydroxypyrid 98.7 6.8E-08 2.3E-12 103.0 11.3 36 432-468 10-45 (379)
101 4dna_A Probable glutathione re 98.7 1.2E-07 4.2E-12 104.3 13.7 34 432-466 4-37 (463)
102 1trb_A Thioredoxin reductase; 98.7 8.1E-08 2.8E-12 98.8 11.3 60 646-708 195-256 (320)
103 1q1r_A Putidaredoxin reductase 98.6 1.3E-07 4.5E-12 103.5 13.0 64 639-709 196-261 (431)
104 2r0c_A REBC; flavin adenine di 98.6 3.7E-07 1.3E-11 103.2 17.0 36 432-468 25-60 (549)
105 2e4g_A Tryptophan halogenase; 98.6 1.5E-07 5.1E-12 106.3 13.5 54 636-696 196-250 (550)
106 2dkh_A 3-hydroxybenzoate hydro 98.6 1.2E-07 4.2E-12 109.1 13.0 35 432-467 31-66 (639)
107 3dgh_A TRXR-1, thioredoxin red 98.6 5.5E-08 1.9E-12 107.7 9.5 69 638-709 231-302 (483)
108 3c96_A Flavin-containing monoo 98.6 2.8E-07 9.6E-12 99.3 14.4 36 432-468 3-39 (410)
109 3s5w_A L-ornithine 5-monooxyge 98.6 4.9E-07 1.7E-11 98.7 16.4 37 432-469 29-70 (463)
110 2pyx_A Tryptophan halogenase; 98.6 1.7E-07 5.7E-12 105.2 12.8 55 635-696 176-231 (526)
111 4gut_A Lysine-specific histone 98.6 2.4E-07 8.3E-12 109.5 14.5 40 431-471 334-373 (776)
112 3iwa_A FAD-dependent pyridine 98.6 2.7E-07 9.3E-12 101.7 14.0 64 638-709 206-269 (472)
113 3k30_A Histamine dehydrogenase 98.6 2.1E-07 7.3E-12 108.0 12.9 38 431-469 389-426 (690)
114 3dgz_A Thioredoxin reductase 2 98.6 9.4E-08 3.2E-12 106.1 8.7 69 638-709 229-300 (488)
115 3lzw_A Ferredoxin--NADP reduct 98.6 2.2E-07 7.6E-12 95.4 10.9 34 433-467 7-40 (332)
116 3hyw_A Sulfide-quinone reducta 98.5 5.6E-07 1.9E-11 98.4 14.4 63 638-709 204-266 (430)
117 3h8l_A NADH oxidase; membrane 98.5 2.8E-07 9.7E-12 99.3 11.6 34 435-469 3-39 (409)
118 3h28_A Sulfide-quinone reducta 98.5 1.3E-06 4.4E-11 95.2 16.5 35 434-469 3-39 (430)
119 3ef6_A Toluene 1,2-dioxygenase 98.5 3.2E-07 1.1E-11 99.5 11.5 65 638-710 189-253 (410)
120 4hb9_A Similarities with proba 98.5 5.1E-07 1.7E-11 95.4 12.5 33 435-468 3-35 (412)
121 3ic9_A Dihydrolipoamide dehydr 98.5 1.4E-06 4.7E-11 97.1 16.0 67 638-709 219-287 (492)
122 1m6i_A Programmed cell death p 98.5 2.1E-06 7.2E-11 95.7 17.2 64 638-709 230-293 (493)
123 2gv8_A Monooxygenase; FMO, FAD 98.5 9.8E-07 3.3E-11 96.6 13.9 37 432-469 5-43 (447)
124 3gwf_A Cyclohexanone monooxyge 98.4 3.7E-07 1.3E-11 103.4 10.1 36 432-468 7-43 (540)
125 4ap3_A Steroid monooxygenase; 98.4 6.7E-07 2.3E-11 101.5 12.0 37 431-468 19-55 (549)
126 3l8k_A Dihydrolipoyl dehydroge 98.4 4.5E-07 1.5E-11 100.0 10.2 34 433-467 4-37 (466)
127 4fk1_A Putative thioredoxin re 98.4 1E-07 3.4E-12 98.6 4.7 57 646-709 191-247 (304)
128 3uox_A Otemo; baeyer-villiger 98.4 3E-07 1E-11 104.3 8.8 37 431-468 7-43 (545)
129 1pn0_A Phenol 2-monooxygenase; 98.4 8.7E-07 3E-11 102.8 12.2 35 432-467 7-46 (665)
130 2xve_A Flavin-containing monoo 98.4 1.3E-06 4.4E-11 96.7 12.8 70 637-708 104-176 (464)
131 4gcm_A TRXR, thioredoxin reduc 98.4 1.4E-07 4.9E-12 97.3 4.9 62 646-709 192-254 (312)
132 3qfa_A Thioredoxin reductase 1 98.4 1.1E-06 3.9E-11 98.5 12.5 36 431-467 30-65 (519)
133 2v3a_A Rubredoxin reductase; a 98.4 2.7E-06 9.1E-11 91.1 13.8 64 638-709 191-254 (384)
134 3fpz_A Thiazole biosynthetic e 98.4 3.4E-07 1.2E-11 95.9 6.3 43 430-472 62-105 (326)
135 3vrd_B FCCB subunit, flavocyto 98.3 5.7E-07 1.9E-11 96.4 7.4 57 646-710 213-269 (401)
136 2cdu_A NADPH oxidase; flavoenz 98.3 1.9E-06 6.4E-11 94.5 11.5 59 638-704 195-253 (452)
137 3oc4_A Oxidoreductase, pyridin 98.3 1.5E-06 5E-11 95.5 10.4 37 434-470 3-40 (452)
138 2gqw_A Ferredoxin reductase; f 98.3 4.4E-06 1.5E-10 90.6 13.5 60 638-709 191-250 (408)
139 1vg0_A RAB proteins geranylger 98.3 2.5E-06 8.6E-11 98.9 12.2 41 431-472 6-46 (650)
140 4a5l_A Thioredoxin reductase; 98.3 3.4E-07 1.1E-11 93.9 4.3 56 646-703 199-255 (314)
141 3ics_A Coenzyme A-disulfide re 98.3 2.4E-06 8.2E-11 96.8 11.7 62 638-709 232-293 (588)
142 1c0p_A D-amino acid oxidase; a 98.3 4.8E-07 1.6E-11 95.5 5.4 36 432-468 5-40 (363)
143 3kd9_A Coenzyme A disulfide re 98.3 5.2E-06 1.8E-10 90.9 13.7 62 638-709 194-255 (449)
144 4b1b_A TRXR, thioredoxin reduc 98.3 4.2E-06 1.4E-10 95.1 13.1 34 433-467 42-75 (542)
145 1gte_A Dihydropyrimidine dehyd 98.2 3.9E-06 1.3E-10 101.9 12.0 61 647-709 382-455 (1025)
146 3cgb_A Pyridine nucleotide-dis 98.2 2.8E-06 9.5E-11 94.1 9.7 63 638-709 231-293 (480)
147 3ntd_A FAD-dependent pyridine 98.2 8.4E-06 2.9E-10 91.5 13.5 35 435-469 3-38 (565)
148 1rsg_A FMS1 protein; FAD bindi 98.2 8.1E-07 2.8E-11 99.0 5.0 40 432-472 7-47 (516)
149 2b9w_A Putative aminooxidase; 98.2 1.3E-06 4.3E-11 94.1 6.0 40 432-472 5-45 (424)
150 2yg5_A Putrescine oxidase; oxi 98.1 1.2E-06 4E-11 95.2 4.9 40 432-472 4-43 (453)
151 2jae_A L-amino acid oxidase; o 98.1 1.7E-06 5.9E-11 95.1 5.9 40 432-472 10-49 (489)
152 1v0j_A UDP-galactopyranose mut 98.1 1.7E-06 5.7E-11 93.9 5.5 41 432-472 6-46 (399)
153 1i8t_A UDP-galactopyranose mut 98.1 1.7E-06 5.9E-11 92.9 4.6 39 433-472 1-39 (367)
154 2xdo_A TETX2 protein; tetracyc 98.0 2.6E-06 8.8E-11 91.5 5.1 37 431-468 24-60 (398)
155 3hdq_A UDP-galactopyranose mut 98.0 2.6E-06 8.8E-11 93.4 5.2 41 431-472 27-67 (397)
156 4b63_A L-ornithine N5 monooxyg 98.0 2E-05 7E-10 88.1 12.2 60 635-696 146-212 (501)
157 1sez_A Protoporphyrinogen oxid 98.0 2.9E-06 1E-10 93.4 5.2 39 433-472 13-51 (504)
158 3fbs_A Oxidoreductase; structu 98.0 3.1E-06 1.1E-10 85.5 4.9 34 433-467 2-35 (297)
159 2e1m_A L-glutamate oxidase; L- 98.0 5.2E-06 1.8E-10 90.3 5.7 39 432-471 43-82 (376)
160 2bi7_A UDP-galactopyranose mut 98.0 4.3E-06 1.5E-10 90.4 4.9 39 433-472 3-41 (384)
161 2zbw_A Thioredoxin reductase; 98.0 5E-06 1.7E-10 86.1 5.2 68 638-709 195-263 (335)
162 3cty_A Thioredoxin reductase; 98.0 4.5E-06 1.5E-10 86.2 4.8 61 647-709 202-263 (319)
163 3ihm_A Styrene monooxygenase A 97.9 4.2E-06 1.4E-10 91.4 4.4 35 432-467 21-55 (430)
164 3d1c_A Flavin-containing putat 97.9 5.6E-06 1.9E-10 86.7 5.0 35 432-467 3-38 (369)
165 2iid_A L-amino-acid oxidase; f 97.9 7.1E-06 2.4E-10 90.4 5.4 40 432-472 32-71 (498)
166 2q7v_A Thioredoxin reductase; 97.9 6.4E-06 2.2E-10 85.2 4.4 63 639-705 193-256 (325)
167 3dk9_A Grase, GR, glutathione 97.9 6.8E-06 2.3E-10 90.7 4.5 37 430-467 17-53 (478)
168 2ywl_A Thioredoxin reductase r 97.9 9.9E-06 3.4E-10 77.0 4.8 33 434-467 2-34 (180)
169 4dsg_A UDP-galactopyranose mut 97.8 1.1E-05 3.7E-10 89.9 5.4 40 432-472 8-48 (484)
170 2q0l_A TRXR, thioredoxin reduc 97.8 9.7E-06 3.3E-10 83.0 4.7 66 639-707 184-250 (311)
171 2qae_A Lipoamide, dihydrolipoy 97.8 8.8E-06 3E-10 89.5 4.6 60 647-709 228-289 (468)
172 1vdc_A NTR, NADPH dependent th 97.8 7.2E-06 2.5E-10 84.8 3.4 63 642-708 203-268 (333)
173 1dxl_A Dihydrolipoamide dehydr 97.8 1.4E-05 4.7E-10 87.8 5.8 38 432-470 5-42 (470)
174 2a8x_A Dihydrolipoyl dehydroge 97.8 9.5E-06 3.2E-10 89.2 4.5 67 638-709 216-284 (464)
175 1b37_A Protein (polyamine oxid 97.8 1.3E-05 4.6E-10 87.9 5.1 39 433-472 4-43 (472)
176 1w4x_A Phenylacetone monooxyge 97.8 1.5E-05 5.3E-10 89.7 5.7 37 432-469 15-51 (542)
177 1fl2_A Alkyl hydroperoxide red 97.8 1.3E-05 4.3E-10 82.1 4.5 56 647-704 192-248 (310)
178 2hqm_A GR, grase, glutathione 97.8 1.2E-05 4.2E-10 89.0 4.6 35 432-467 10-44 (479)
179 2yqu_A 2-oxoglutarate dehydrog 97.8 1.2E-05 4.2E-10 88.1 4.5 36 433-469 1-36 (455)
180 1onf_A GR, grase, glutathione 97.8 1.5E-05 5E-10 88.9 5.0 34 433-467 2-35 (500)
181 2a87_A TRXR, TR, thioredoxin r 97.8 1.2E-05 4.3E-10 83.7 4.1 59 646-708 202-261 (335)
182 1zmd_A Dihydrolipoyl dehydroge 97.8 1.2E-05 4.3E-10 88.5 4.2 37 432-469 5-41 (474)
183 1v59_A Dihydrolipoamide dehydr 97.8 1.3E-05 4.5E-10 88.3 4.4 70 638-709 228-300 (478)
184 1ojt_A Surface protein; redox- 97.7 1.5E-05 5.1E-10 88.2 4.7 36 433-469 6-41 (482)
185 1zk7_A HGII, reductase, mercur 97.7 1.7E-05 6E-10 87.1 4.9 35 432-467 3-37 (467)
186 1ebd_A E3BD, dihydrolipoamide 97.7 1.8E-05 6.2E-10 86.7 4.7 33 433-466 3-35 (455)
187 1ges_A Glutathione reductase; 97.7 1.7E-05 5.9E-10 87.1 4.6 34 433-467 4-37 (450)
188 2r9z_A Glutathione amide reduc 97.7 1.9E-05 6.6E-10 87.1 4.8 34 433-467 4-37 (463)
189 3c4a_A Probable tryptophan hyd 97.7 2.1E-05 7.3E-10 83.9 5.0 35 435-469 2-37 (381)
190 1fec_A Trypanothione reductase 97.7 2.4E-05 8.3E-10 87.0 5.3 65 638-709 235-301 (490)
191 2vdc_G Glutamate synthase [NAD 97.7 3E-05 1E-09 86.0 5.8 38 432-470 121-158 (456)
192 1lvl_A Dihydrolipoamide dehydr 97.7 2.4E-05 8.1E-10 86.2 4.7 34 432-466 4-37 (458)
193 2eq6_A Pyruvate dehydrogenase 97.7 2.3E-05 8E-10 86.3 4.6 68 638-709 214-284 (464)
194 3cty_A Thioredoxin reductase; 97.6 0.0002 6.8E-09 73.7 10.4 33 434-467 156-188 (319)
195 3g5s_A Methylenetetrahydrofola 97.6 6.2E-05 2.1E-09 82.9 6.6 35 434-469 2-36 (443)
196 2x8g_A Thioredoxin glutathione 97.5 4.5E-05 1.5E-09 86.7 4.9 35 431-466 105-139 (598)
197 2z3y_A Lysine-specific histone 97.5 5.7E-05 1.9E-09 87.4 5.8 40 431-471 105-144 (662)
198 2wpf_A Trypanothione reductase 97.5 4.3E-05 1.5E-09 85.2 4.4 65 638-709 239-305 (495)
199 2eq6_A Pyruvate dehydrogenase 97.5 0.00033 1.1E-08 77.2 11.2 32 435-467 171-202 (464)
200 1xdi_A RV3303C-LPDA; reductase 97.5 4.2E-05 1.4E-09 85.0 4.1 64 638-709 227-292 (499)
201 1hyu_A AHPF, alkyl hydroperoxi 97.5 6E-05 2.1E-09 84.6 4.9 55 648-704 404-459 (521)
202 1fl2_A Alkyl hydroperoxide red 97.5 0.00084 2.9E-08 68.5 12.7 32 435-467 146-177 (310)
203 2bc0_A NADH oxidase; flavoprot 97.5 6.7E-05 2.3E-09 83.3 4.7 37 432-469 34-73 (490)
204 1v59_A Dihydrolipoamide dehydr 97.4 0.00042 1.4E-08 76.2 10.9 32 435-467 185-216 (478)
205 1o94_A Tmadh, trimethylamine d 97.4 8.6E-05 2.9E-09 86.9 5.6 39 432-471 388-426 (729)
206 2xag_A Lysine-specific histone 97.4 9.8E-05 3.3E-09 88.2 6.0 39 432-471 277-315 (852)
207 2q0l_A TRXR, thioredoxin reduc 97.4 0.00099 3.4E-08 68.0 12.8 33 434-467 144-176 (311)
208 1ps9_A 2,4-dienoyl-COA reducta 97.4 9.3E-05 3.2E-09 85.6 5.4 39 432-471 372-410 (671)
209 3h0g_A DNA-directed RNA polyme 97.4 2.3E-05 7.8E-10 99.0 0.0 6 71-76 1541-1546(1752)
210 1xhc_A NADH oxidase /nitrite r 97.4 9.7E-05 3.3E-09 79.1 4.2 59 638-709 187-245 (367)
211 2zbw_A Thioredoxin reductase; 97.3 0.0013 4.4E-08 67.9 12.4 33 434-467 153-185 (335)
212 1vdc_A NTR, NADPH dependent th 97.3 0.0015 5.3E-08 67.2 12.8 33 434-467 160-192 (333)
213 2gag_A Heterotetrameric sarcos 97.3 0.00011 3.6E-09 88.9 4.6 61 646-707 327-392 (965)
214 1ebd_A E3BD, dihydrolipoamide 97.3 0.00064 2.2E-08 74.4 10.2 33 434-467 171-203 (455)
215 1zmd_A Dihydrolipoyl dehydroge 97.3 0.00088 3E-08 73.7 11.2 61 647-709 232-295 (474)
216 3s5w_A L-ornithine 5-monooxyge 97.3 0.0042 1.4E-07 67.6 16.3 51 646-699 327-378 (463)
217 2hqm_A GR, grase, glutathione 97.3 0.00035 1.2E-08 77.3 7.8 59 647-709 238-297 (479)
218 1ges_A Glutathione reductase; 97.3 0.00044 1.5E-08 75.9 8.3 32 435-467 169-200 (450)
219 2yqu_A 2-oxoglutarate dehydrog 97.3 0.0006 2E-08 74.6 9.3 32 435-467 169-200 (455)
220 1y56_A Hypothetical protein PH 97.2 0.00013 4.4E-09 81.3 3.7 57 646-709 268-324 (493)
221 1nhp_A NADH peroxidase; oxidor 97.2 0.00019 6.4E-09 78.5 4.8 35 435-469 2-37 (447)
222 3sx6_A Sulfide-quinone reducta 97.2 0.00016 5.4E-09 78.9 3.9 35 434-469 5-42 (437)
223 2a8x_A Dihydrolipoyl dehydroge 97.2 0.0011 3.6E-08 72.8 10.4 32 435-467 173-204 (464)
224 2qae_A Lipoamide, dihydrolipoy 97.2 0.0023 7.8E-08 70.3 13.0 32 435-467 176-207 (468)
225 1hyu_A AHPF, alkyl hydroperoxi 97.2 0.0021 7.1E-08 72.1 12.9 32 435-467 357-388 (521)
226 2q7v_A Thioredoxin reductase; 97.2 0.0026 9E-08 65.5 12.6 32 435-467 154-185 (325)
227 2r9z_A Glutathione amide reduc 97.2 0.00095 3.2E-08 73.6 9.6 32 435-467 168-199 (463)
228 1dxl_A Dihydrolipoamide dehydr 97.1 0.00062 2.1E-08 74.6 7.5 32 435-467 179-210 (470)
229 1onf_A GR, grase, glutathione 97.1 0.001 3.6E-08 74.0 8.8 32 435-467 178-209 (500)
230 1xdi_A RV3303C-LPDA; reductase 97.1 0.0013 4.4E-08 73.0 9.4 32 435-467 184-215 (499)
231 1cjc_A Protein (adrenodoxin re 97.0 0.0004 1.4E-08 76.9 5.2 36 433-469 6-43 (460)
232 1ojt_A Surface protein; redox- 97.0 0.0014 4.7E-08 72.5 9.4 32 435-467 187-218 (482)
233 1lqt_A FPRA; NADP+ derivative, 97.0 0.00036 1.2E-08 77.3 4.1 37 433-469 3-45 (456)
234 3lzw_A Ferredoxin--NADP reduct 97.0 0.0026 8.8E-08 65.0 10.2 60 647-709 201-261 (332)
235 3ayj_A Pro-enzyme of L-phenyla 97.0 0.00028 9.4E-09 82.8 3.0 36 433-469 56-100 (721)
236 3dk9_A Grase, GR, glutathione 96.9 0.003 1E-07 69.5 10.8 32 435-467 189-220 (478)
237 4eqs_A Coenzyme A disulfide re 96.8 0.0007 2.4E-08 74.2 4.4 59 639-709 193-251 (437)
238 1zk7_A HGII, reductase, mercur 96.8 0.0029 1E-07 69.4 9.2 32 435-467 178-209 (467)
239 2wpf_A Trypanothione reductase 96.7 0.0028 9.6E-08 70.5 8.8 33 435-467 193-227 (495)
240 4eqs_A Coenzyme A disulfide re 96.7 0.0022 7.6E-08 70.2 7.7 33 435-468 149-181 (437)
241 1fec_A Trypanothione reductase 96.7 0.0027 9.1E-08 70.6 8.4 33 435-467 189-223 (490)
242 3klj_A NAD(FAD)-dependent dehy 96.6 0.0013 4.4E-08 71.0 4.9 36 433-469 9-44 (385)
243 4g6h_A Rotenone-insensitive NA 96.5 0.00096 3.3E-08 74.8 3.3 34 434-468 43-76 (502)
244 3qfa_A Thioredoxin reductase 1 96.3 0.013 4.5E-07 65.5 10.7 31 435-466 212-242 (519)
245 1cjc_A Protein (adrenodoxin re 95.8 0.05 1.7E-06 60.1 12.1 52 648-700 270-335 (460)
246 4g6h_A Rotenone-insensitive NA 95.7 0.02 6.9E-07 64.0 8.5 50 646-700 283-334 (502)
247 2gag_A Heterotetrameric sarcos 95.6 0.031 1.1E-06 67.5 10.0 32 435-467 286-317 (965)
248 1nhp_A NADH peroxidase; oxidor 95.3 0.013 4.3E-07 63.9 4.9 36 433-469 149-184 (447)
249 1lss_A TRK system potassium up 95.1 0.019 6.4E-07 51.4 4.6 31 435-466 6-36 (140)
250 3klj_A NAD(FAD)-dependent dehy 95.1 0.017 5.8E-07 62.3 5.1 34 435-469 148-181 (385)
251 3llv_A Exopolyphosphatase-rela 95.0 0.02 6.9E-07 52.1 4.7 31 435-466 8-38 (141)
252 4gcm_A TRXR, thioredoxin reduc 95.0 0.017 5.7E-07 59.2 4.4 34 435-469 147-180 (312)
253 2g1u_A Hypothetical protein TM 94.9 0.021 7.3E-07 53.2 4.6 32 434-466 20-51 (155)
254 3fwz_A Inner membrane protein 94.9 0.023 7.9E-07 52.2 4.7 31 435-466 9-39 (140)
255 1lvl_A Dihydrolipoamide dehydr 94.6 0.024 8.1E-07 62.2 4.8 34 435-469 173-206 (458)
256 3ic5_A Putative saccharopine d 94.6 0.027 9.2E-07 48.8 4.1 31 435-466 7-38 (118)
257 4a5l_A Thioredoxin reductase; 94.4 0.027 9.3E-07 57.2 4.4 35 434-469 153-187 (314)
258 2v3a_A Rubredoxin reductase; a 94.3 0.032 1.1E-06 59.4 4.8 35 434-469 146-180 (384)
259 1xhc_A NADH oxidase /nitrite r 94.3 0.031 1.1E-06 59.6 4.7 35 434-469 144-178 (367)
260 2hmt_A YUAA protein; RCK, KTN, 94.2 0.034 1.2E-06 49.8 4.1 31 435-466 8-38 (144)
261 1id1_A Putative potassium chan 94.2 0.047 1.6E-06 50.6 5.1 31 435-466 5-35 (153)
262 2gqw_A Ferredoxin reductase; f 93.6 0.051 1.7E-06 58.7 4.8 35 434-469 146-180 (408)
263 3d1c_A Flavin-containing putat 93.5 0.053 1.8E-06 56.4 4.6 34 435-469 168-201 (369)
264 3cgb_A Pyridine nucleotide-dis 93.5 0.041 1.4E-06 60.7 4.0 35 434-469 187-221 (480)
265 3ado_A Lambda-crystallin; L-gu 93.3 0.062 2.1E-06 57.2 4.8 31 435-466 8-38 (319)
266 2bc0_A NADH oxidase; flavoprot 93.2 0.062 2.1E-06 59.4 4.9 35 434-469 195-229 (490)
267 1f0y_A HCDH, L-3-hydroxyacyl-C 93.1 0.07 2.4E-06 55.2 4.7 31 435-466 17-47 (302)
268 3l4b_C TRKA K+ channel protien 93.0 0.071 2.4E-06 52.4 4.4 31 435-466 2-32 (218)
269 1q1r_A Putidaredoxin reductase 92.9 0.082 2.8E-06 57.5 5.1 34 435-469 151-184 (431)
270 3ic9_A Dihydrolipoamide dehydr 92.9 0.08 2.8E-06 58.7 5.1 34 435-469 176-209 (492)
271 3kd9_A Coenzyme A disulfide re 92.8 0.08 2.7E-06 57.6 4.9 34 435-469 150-183 (449)
272 4e12_A Diketoreductase; oxidor 92.7 0.087 3E-06 54.2 4.7 32 435-467 6-37 (283)
273 3ef6_A Toluene 1,2-dioxygenase 92.7 0.086 3E-06 56.8 4.9 35 434-469 144-178 (410)
274 1ks9_A KPA reductase;, 2-dehyd 92.7 0.1 3.4E-06 52.8 5.0 33 435-468 2-34 (291)
275 3i83_A 2-dehydropantoate 2-red 92.6 0.094 3.2E-06 54.9 4.9 32 435-467 4-35 (320)
276 2gv8_A Monooxygenase; FMO, FAD 92.4 0.092 3.1E-06 57.1 4.7 35 434-469 213-248 (447)
277 2cdu_A NADPH oxidase; flavoenz 92.3 0.098 3.4E-06 56.9 4.7 34 435-469 151-184 (452)
278 1trb_A Thioredoxin reductase; 92.2 0.1 3.5E-06 53.0 4.4 35 434-469 146-180 (320)
279 3hn2_A 2-dehydropantoate 2-red 92.1 0.1 3.5E-06 54.4 4.5 32 435-467 4-35 (312)
280 2ew2_A 2-dehydropantoate 2-red 92.0 0.12 4.1E-06 52.8 4.7 31 435-466 5-35 (316)
281 3urh_A Dihydrolipoyl dehydroge 92.0 0.11 3.8E-06 57.2 4.8 34 435-469 200-233 (491)
282 3ghy_A Ketopantoate reductase 91.9 0.14 4.7E-06 54.0 5.1 31 435-466 5-35 (335)
283 3ntd_A FAD-dependent pyridine 91.9 0.12 4E-06 57.8 4.8 34 435-469 153-186 (565)
284 3c85_A Putative glutathione-re 91.9 0.11 3.8E-06 49.4 4.0 32 435-466 41-72 (183)
285 2a87_A TRXR, TR, thioredoxin r 91.9 0.12 4E-06 53.5 4.5 35 434-469 156-190 (335)
286 2x8g_A Thioredoxin glutathione 91.9 0.12 4E-06 58.6 4.9 31 435-466 288-318 (598)
287 2xve_A Flavin-containing monoo 91.8 0.11 3.8E-06 57.2 4.5 34 435-469 199-232 (464)
288 3fg2_P Putative rubredoxin red 91.8 0.13 4.5E-06 55.1 4.9 34 435-469 144-177 (404)
289 3itj_A Thioredoxin reductase 1 91.8 0.12 4.2E-06 52.6 4.4 35 434-469 174-208 (338)
290 1jw9_B Molybdopterin biosynthe 91.7 0.13 4.5E-06 52.3 4.6 34 433-467 31-65 (249)
291 3gwf_A Cyclohexanone monooxyge 91.7 0.11 3.7E-06 58.7 4.3 35 434-469 179-213 (540)
292 3lxd_A FAD-dependent pyridine 91.7 0.14 4.7E-06 55.1 5.0 34 435-469 154-187 (415)
293 2y0c_A BCEC, UDP-glucose dehyd 91.7 0.12 4.2E-06 57.6 4.7 32 434-466 9-40 (478)
294 2raf_A Putative dinucleotide-b 91.6 0.16 5.5E-06 50.0 5.0 33 435-468 21-53 (209)
295 3g17_A Similar to 2-dehydropan 91.6 0.12 4.1E-06 53.4 4.2 32 435-467 4-35 (294)
296 2dpo_A L-gulonate 3-dehydrogen 91.5 0.15 5E-06 54.1 4.8 31 435-466 8-38 (319)
297 4ap3_A Steroid monooxygenase; 91.5 0.13 4.4E-06 58.2 4.7 35 434-469 192-226 (549)
298 1lld_A L-lactate dehydrogenase 91.4 0.15 5.2E-06 52.9 4.7 32 435-467 9-42 (319)
299 3dfz_A SIRC, precorrin-2 dehyd 91.4 0.14 4.9E-06 51.7 4.4 33 433-466 31-63 (223)
300 3uox_A Otemo; baeyer-villiger 91.4 0.11 3.9E-06 58.6 4.1 35 434-469 186-220 (545)
301 3l8k_A Dihydrolipoyl dehydroge 91.3 0.16 5.4E-06 55.7 5.0 34 435-469 174-207 (466)
302 3f8d_A Thioredoxin reductase ( 91.1 0.17 6E-06 51.0 4.7 35 434-469 155-189 (323)
303 3oc4_A Oxidoreductase, pyridin 91.1 0.16 5.6E-06 55.3 4.8 34 435-469 149-182 (452)
304 3ab1_A Ferredoxin--NADP reduct 91.0 0.13 4.4E-06 53.7 3.8 34 435-469 165-198 (360)
305 1kyq_A Met8P, siroheme biosynt 91.0 0.11 3.9E-06 54.1 3.3 33 434-467 14-46 (274)
306 1txg_A Glycerol-3-phosphate de 91.0 0.16 5.6E-06 52.6 4.5 30 435-465 2-31 (335)
307 4a7p_A UDP-glucose dehydrogena 90.9 0.18 6.1E-06 56.0 5.0 35 433-468 8-42 (446)
308 3gg2_A Sugar dehydrogenase, UD 90.7 0.18 6.1E-06 55.9 4.7 31 435-466 4-34 (450)
309 1bg6_A N-(1-D-carboxylethyl)-L 90.7 0.2 6.7E-06 52.4 4.8 31 435-466 6-36 (359)
310 3lad_A Dihydrolipoamide dehydr 90.6 0.2 6.7E-06 54.9 4.9 34 435-469 182-215 (476)
311 1zcj_A Peroxisomal bifunctiona 90.6 0.18 6.2E-06 55.9 4.6 32 435-467 39-70 (463)
312 3ics_A Coenzyme A-disulfide re 90.5 0.2 6.7E-06 56.6 4.9 34 435-469 189-222 (588)
313 1mo9_A ORF3; nucleotide bindin 90.4 0.21 7.3E-06 55.7 5.0 35 434-469 215-249 (523)
314 1mv8_A GMD, GDP-mannose 6-dehy 90.4 0.17 5.9E-06 55.4 4.2 31 435-466 2-32 (436)
315 3dgz_A Thioredoxin reductase 2 90.2 0.22 7.5E-06 54.9 4.9 32 435-467 187-218 (488)
316 3k6j_A Protein F01G10.3, confi 90.2 0.21 7.3E-06 55.7 4.7 32 435-467 56-87 (460)
317 3r9u_A Thioredoxin reductase; 90.1 0.26 8.7E-06 49.6 4.9 35 434-469 148-182 (315)
318 1z82_A Glycerol-3-phosphate de 90.1 0.24 8.1E-06 52.0 4.8 33 433-466 14-46 (335)
319 3lk7_A UDP-N-acetylmuramoylala 90.0 0.2 6.7E-06 55.2 4.3 32 435-467 11-42 (451)
320 3ego_A Probable 2-dehydropanto 89.9 0.24 8.1E-06 51.7 4.6 31 435-467 4-34 (307)
321 2x5o_A UDP-N-acetylmuramoylala 89.9 0.18 6.3E-06 55.2 3.9 34 435-469 7-40 (439)
322 1nyt_A Shikimate 5-dehydrogena 89.8 0.26 8.9E-06 50.5 4.7 31 435-466 121-151 (271)
323 2vdc_G Glutamate synthase [NAD 89.8 0.27 9.1E-06 54.3 5.1 35 434-469 265-300 (456)
324 3hwr_A 2-dehydropantoate 2-red 89.7 0.26 8.8E-06 51.6 4.7 30 435-466 21-50 (318)
325 1jay_A Coenzyme F420H2:NADP+ o 89.6 0.28 9.5E-06 47.5 4.5 31 435-466 2-33 (212)
326 1zej_A HBD-9, 3-hydroxyacyl-CO 89.6 0.26 8.9E-06 51.7 4.6 31 435-467 14-44 (293)
327 3vtf_A UDP-glucose 6-dehydroge 89.6 0.26 8.9E-06 54.7 4.8 32 434-466 22-53 (444)
328 4gwq_H DNA-directed RNA polyme 89.5 0.24 8.1E-06 36.1 2.9 32 172-208 1-35 (35)
329 2ewd_A Lactate dehydrogenase,; 89.5 0.27 9.4E-06 51.4 4.7 32 435-467 6-38 (317)
330 2a9f_A Putative malic enzyme ( 89.5 0.28 9.5E-06 53.8 4.8 37 430-467 185-222 (398)
331 4b1b_A TRXR, thioredoxin reduc 89.4 0.3 1E-05 55.3 5.3 34 435-469 225-258 (542)
332 3k96_A Glycerol-3-phosphate de 89.4 0.27 9.4E-06 52.7 4.7 32 434-466 30-61 (356)
333 4dio_A NAD(P) transhydrogenase 89.4 0.29 1E-05 53.7 5.0 34 433-467 190-223 (405)
334 3oj0_A Glutr, glutamyl-tRNA re 89.3 0.12 4.3E-06 47.3 1.7 31 435-466 23-53 (144)
335 3pef_A 6-phosphogluconate dehy 89.3 0.3 1E-05 50.0 4.7 32 435-467 3-34 (287)
336 1pzg_A LDH, lactate dehydrogen 89.3 0.29 1E-05 51.9 4.8 32 435-467 11-43 (331)
337 2vns_A Metalloreductase steap3 89.3 0.32 1.1E-05 48.0 4.7 32 434-466 29-60 (215)
338 3dtt_A NADP oxidoreductase; st 89.2 0.31 1.1E-05 49.0 4.6 33 434-467 20-52 (245)
339 3o0h_A Glutathione reductase; 89.1 0.3 1E-05 53.7 4.9 34 435-469 193-226 (484)
340 1vl6_A Malate oxidoreductase; 89.1 0.31 1.1E-05 53.3 4.8 38 430-468 189-227 (388)
341 2v6b_A L-LDH, L-lactate dehydr 89.1 0.31 1.1E-05 50.9 4.7 32 435-467 2-35 (304)
342 3l9w_A Glutathione-regulated p 89.0 0.3 1E-05 53.5 4.7 32 435-467 6-37 (413)
343 3doj_A AT3G25530, dehydrogenas 89.0 0.32 1.1E-05 50.6 4.7 32 435-467 23-54 (310)
344 3g0o_A 3-hydroxyisobutyrate de 89.0 0.32 1.1E-05 50.3 4.7 32 435-467 9-40 (303)
345 1evy_A Glycerol-3-phosphate de 88.9 0.19 6.6E-06 53.2 3.1 31 435-466 17-47 (366)
346 2hjr_A Malate dehydrogenase; m 88.9 0.35 1.2E-05 51.3 5.0 32 435-467 16-48 (328)
347 3mog_A Probable 3-hydroxybutyr 88.8 0.31 1.1E-05 54.5 4.8 32 435-467 7-38 (483)
348 4a9w_A Monooxygenase; baeyer-v 88.8 0.26 8.8E-06 50.3 3.8 32 434-467 164-195 (357)
349 3p2y_A Alanine dehydrogenase/p 88.7 0.32 1.1E-05 53.0 4.6 34 433-467 184-217 (381)
350 4huj_A Uncharacterized protein 88.6 0.29 9.9E-06 48.4 4.0 32 434-466 24-56 (220)
351 3fbs_A Oxidoreductase; structu 88.6 0.24 8.1E-06 49.4 3.3 33 434-468 142-174 (297)
352 3dgh_A TRXR-1, thioredoxin red 88.5 0.32 1.1E-05 53.4 4.7 32 435-467 189-220 (483)
353 3ew7_A LMO0794 protein; Q8Y8U8 88.5 0.39 1.3E-05 45.9 4.6 31 436-467 3-34 (221)
354 4dna_A Probable glutathione re 88.5 0.36 1.2E-05 52.7 4.9 34 435-469 172-205 (463)
355 3pdu_A 3-hydroxyisobutyrate de 88.4 0.31 1.1E-05 49.8 4.2 32 435-467 3-34 (287)
356 3qha_A Putative oxidoreductase 88.3 0.3 1E-05 50.5 3.9 34 434-468 16-49 (296)
357 2eez_A Alanine dehydrogenase; 88.2 0.36 1.2E-05 51.7 4.6 32 434-466 167-198 (369)
358 4g65_A TRK system potassium up 88.1 0.2 6.8E-06 55.7 2.6 32 435-467 5-36 (461)
359 3h2s_A Putative NADH-flavin re 88.1 0.42 1.4E-05 46.0 4.6 30 436-466 3-33 (224)
360 2h78_A Hibadh, 3-hydroxyisobut 88.1 0.34 1.2E-05 49.8 4.2 31 435-466 5-35 (302)
361 1yqg_A Pyrroline-5-carboxylate 88.1 0.4 1.4E-05 48.0 4.6 31 435-466 2-33 (263)
362 2f1k_A Prephenate dehydrogenas 88.0 0.41 1.4E-05 48.4 4.7 31 435-466 2-32 (279)
363 1pjc_A Protein (L-alanine dehy 88.0 0.38 1.3E-05 51.5 4.6 32 434-466 168-199 (361)
364 1hdo_A Biliverdin IX beta redu 88.0 0.44 1.5E-05 44.9 4.6 32 435-467 5-37 (206)
365 2o8l_A V8 protease, taphylococ 88.0 0.1 3.6E-06 53.6 0.2 8 176-183 220-227 (274)
366 3g79_A NDP-N-acetyl-D-galactos 87.9 0.36 1.2E-05 54.0 4.6 34 435-468 20-54 (478)
367 1x13_A NAD(P) transhydrogenase 87.9 0.39 1.3E-05 52.3 4.7 33 434-467 173-205 (401)
368 1a5z_A L-lactate dehydrogenase 87.8 0.4 1.4E-05 50.4 4.6 31 435-466 2-34 (319)
369 1yj8_A Glycerol-3-phosphate de 87.8 0.35 1.2E-05 51.5 4.2 33 435-468 23-62 (375)
370 4dll_A 2-hydroxy-3-oxopropiona 87.8 0.36 1.2E-05 50.5 4.2 32 435-467 33-64 (320)
371 2pv7_A T-protein [includes: ch 87.7 0.44 1.5E-05 49.3 4.8 32 435-467 23-55 (298)
372 3ojo_A CAP5O; rossmann fold, c 87.7 0.35 1.2E-05 53.5 4.2 31 435-466 13-43 (431)
373 3e8x_A Putative NAD-dependent 87.6 0.46 1.6E-05 46.4 4.7 32 435-467 23-55 (236)
374 1hyh_A L-hicdh, L-2-hydroxyiso 87.6 0.42 1.4E-05 49.8 4.5 31 435-466 3-35 (309)
375 3ius_A Uncharacterized conserv 87.5 0.41 1.4E-05 48.0 4.3 32 435-467 7-38 (286)
376 3c7a_A Octopine dehydrogenase; 87.5 0.3 1E-05 52.5 3.5 29 435-464 4-33 (404)
377 1p77_A Shikimate 5-dehydrogena 87.5 0.33 1.1E-05 49.8 3.6 31 435-466 121-151 (272)
378 3gpi_A NAD-dependent epimerase 87.5 0.53 1.8E-05 47.4 5.1 32 435-467 5-36 (286)
379 1l7d_A Nicotinamide nucleotide 87.4 0.48 1.6E-05 51.1 5.0 33 434-467 173-205 (384)
380 1x0v_A GPD-C, GPDH-C, glycerol 87.3 0.32 1.1E-05 51.0 3.5 33 435-468 10-49 (354)
381 2zyd_A 6-phosphogluconate dehy 87.3 0.47 1.6E-05 52.9 5.0 34 432-466 14-47 (480)
382 1zud_1 Adenylyltransferase THI 87.2 0.42 1.4E-05 48.7 4.2 35 432-467 27-62 (251)
383 2uyy_A N-PAC protein; long-cha 87.1 0.51 1.7E-05 48.8 4.8 32 435-467 32-63 (316)
384 2wtb_A MFP2, fatty acid multif 87.1 0.43 1.5E-05 56.0 4.7 31 435-466 314-344 (725)
385 1t2d_A LDH-P, L-lactate dehydr 87.0 0.52 1.8E-05 49.8 4.9 32 435-467 6-38 (322)
386 4ezb_A Uncharacterized conserv 87.0 0.45 1.5E-05 49.9 4.4 32 435-467 26-58 (317)
387 2egg_A AROE, shikimate 5-dehyd 87.0 0.49 1.7E-05 49.4 4.6 31 435-466 143-174 (297)
388 1guz_A Malate dehydrogenase; o 86.9 0.54 1.9E-05 49.2 4.9 33 435-467 2-35 (310)
389 2rcy_A Pyrroline carboxylate r 86.8 0.65 2.2E-05 46.4 5.3 33 435-468 6-42 (262)
390 3c24_A Putative oxidoreductase 86.8 0.52 1.8E-05 48.1 4.7 31 435-466 13-44 (286)
391 2g5c_A Prephenate dehydrogenas 86.8 0.55 1.9E-05 47.6 4.8 31 435-466 3-35 (281)
392 3qsg_A NAD-binding phosphogluc 86.7 0.48 1.6E-05 49.4 4.4 32 434-466 25-57 (312)
393 3iwa_A FAD-dependent pyridine 86.7 0.43 1.5E-05 52.2 4.2 36 434-469 160-195 (472)
394 3l6d_A Putative oxidoreductase 86.7 0.55 1.9E-05 48.8 4.8 33 434-467 10-42 (306)
395 3ond_A Adenosylhomocysteinase; 86.7 0.5 1.7E-05 53.1 4.7 32 434-466 266-297 (488)
396 3phh_A Shikimate dehydrogenase 86.6 0.6 2.1E-05 48.4 5.0 33 434-467 119-151 (269)
397 1vpd_A Tartronate semialdehyde 86.6 0.47 1.6E-05 48.4 4.2 31 435-466 7-37 (299)
398 2aef_A Calcium-gated potassium 86.5 0.28 9.5E-06 48.5 2.3 31 435-467 11-41 (234)
399 2ywl_A Thioredoxin reductase r 86.5 1.2 4.1E-05 41.6 6.6 60 638-709 60-119 (180)
400 2gf2_A Hibadh, 3-hydroxyisobut 86.5 0.52 1.8E-05 48.0 4.4 32 435-467 2-33 (296)
401 1nvt_A Shikimate 5'-dehydrogen 86.3 0.44 1.5E-05 49.2 3.8 30 435-466 130-159 (287)
402 3ggo_A Prephenate dehydrogenas 86.3 0.57 1.9E-05 49.2 4.8 32 435-467 35-68 (314)
403 2vhw_A Alanine dehydrogenase; 86.3 0.54 1.8E-05 50.7 4.6 32 434-466 169-200 (377)
404 2dkn_A 3-alpha-hydroxysteroid 86.3 0.61 2.1E-05 45.6 4.6 31 436-467 4-35 (255)
405 3tl2_A Malate dehydrogenase; c 86.3 0.55 1.9E-05 49.7 4.6 32 434-466 9-41 (315)
406 1pgj_A 6PGDH, 6-PGDH, 6-phosph 86.1 0.59 2E-05 52.1 5.0 31 435-466 3-33 (478)
407 3o38_A Short chain dehydrogena 86.0 0.43 1.5E-05 47.7 3.5 31 435-466 24-56 (266)
408 1wdk_A Fatty oxidation complex 85.9 0.52 1.8E-05 55.2 4.6 31 435-466 316-346 (715)
409 4e21_A 6-phosphogluconate dehy 85.9 0.6 2.1E-05 50.2 4.8 33 434-467 23-55 (358)
410 1gte_A Dihydropyrimidine dehyd 85.9 0.53 1.8E-05 57.2 4.8 32 435-467 334-366 (1025)
411 3rui_A Ubiquitin-like modifier 85.8 0.62 2.1E-05 50.1 4.7 36 432-468 33-69 (340)
412 2pgd_A 6-phosphogluconate dehy 85.8 0.64 2.2E-05 51.7 5.1 32 435-467 4-35 (482)
413 1m6i_A Programmed cell death p 85.8 0.62 2.1E-05 51.6 4.9 34 435-468 182-218 (493)
414 1o94_A Tmadh, trimethylamine d 85.7 0.46 1.6E-05 55.5 4.1 32 435-467 530-563 (729)
415 2p4q_A 6-phosphogluconate dehy 85.7 0.7 2.4E-05 51.9 5.3 34 433-467 10-43 (497)
416 3dhn_A NAD-dependent epimerase 85.7 0.62 2.1E-05 45.0 4.3 32 435-467 6-38 (227)
417 1ur5_A Malate dehydrogenase; o 85.7 0.67 2.3E-05 48.6 4.8 32 435-467 4-36 (309)
418 2hk9_A Shikimate dehydrogenase 85.7 0.63 2.2E-05 47.7 4.6 31 435-466 131-161 (275)
419 3r6d_A NAD-dependent epimerase 85.6 0.7 2.4E-05 44.7 4.7 30 436-466 8-39 (221)
420 3eag_A UDP-N-acetylmuramate:L- 85.5 0.64 2.2E-05 48.9 4.6 33 435-468 6-39 (326)
421 3vps_A TUNA, NAD-dependent epi 85.5 0.73 2.5E-05 46.6 4.9 33 435-468 9-42 (321)
422 3d1l_A Putative NADP oxidoredu 85.4 0.69 2.4E-05 46.5 4.7 31 435-466 12-43 (266)
423 1i36_A Conserved hypothetical 85.4 0.57 2E-05 47.0 4.0 30 435-465 2-31 (264)
424 3h8v_A Ubiquitin-like modifier 85.4 0.65 2.2E-05 48.8 4.6 37 430-467 33-70 (292)
425 1lu9_A Methylene tetrahydromet 85.3 0.69 2.4E-05 47.5 4.7 31 435-466 121-152 (287)
426 2iz1_A 6-phosphogluconate dehy 85.2 0.78 2.7E-05 50.9 5.4 32 434-466 6-37 (474)
427 3cky_A 2-hydroxymethyl glutara 85.1 0.62 2.1E-05 47.5 4.2 31 435-466 6-36 (301)
428 1dlj_A UDP-glucose dehydrogena 85.0 0.56 1.9E-05 50.9 4.0 30 435-466 2-31 (402)
429 1pjq_A CYSG, siroheme synthase 84.9 0.6 2E-05 51.7 4.3 32 434-466 13-44 (457)
430 3jyo_A Quinate/shikimate dehyd 84.8 0.76 2.6E-05 47.8 4.7 32 434-466 128-160 (283)
431 2o3j_A UDP-glucose 6-dehydroge 84.7 0.6 2E-05 52.0 4.1 32 435-466 11-43 (481)
432 2pzm_A Putative nucleotide sug 84.6 0.8 2.8E-05 47.2 4.8 32 435-467 22-54 (330)
433 3zwc_A Peroxisomal bifunctiona 84.6 0.67 2.3E-05 54.7 4.6 31 435-466 318-348 (742)
434 3tnl_A Shikimate dehydrogenase 84.5 0.77 2.6E-05 48.7 4.7 32 434-466 155-187 (315)
435 3dqp_A Oxidoreductase YLBE; al 84.4 0.7 2.4E-05 44.6 4.0 31 436-467 3-34 (219)
436 1leh_A Leucine dehydrogenase; 84.4 0.75 2.6E-05 49.7 4.6 32 434-466 174-205 (364)
437 3don_A Shikimate dehydrogenase 84.3 0.67 2.3E-05 48.2 4.0 33 434-467 118-151 (277)
438 2d5c_A AROE, shikimate 5-dehyd 84.3 0.88 3E-05 46.1 4.8 31 435-466 118-148 (263)
439 1y8q_A Ubiquitin-like 1 activa 84.2 0.72 2.5E-05 49.3 4.4 35 432-467 35-70 (346)
440 3pid_A UDP-glucose 6-dehydroge 84.2 0.73 2.5E-05 51.0 4.5 31 435-467 38-68 (432)
441 3d4o_A Dipicolinate synthase s 84.1 0.83 2.8E-05 47.2 4.7 32 434-466 156-187 (293)
442 3u62_A Shikimate dehydrogenase 84.0 0.84 2.9E-05 46.7 4.6 31 435-466 110-141 (253)
443 1cyd_A Carbonyl reductase; sho 84.0 0.89 3E-05 44.5 4.6 31 435-466 9-40 (244)
444 3h5n_A MCCB protein; ubiquitin 84.0 0.77 2.6E-05 49.2 4.5 35 432-467 117-152 (353)
445 4gwg_A 6-phosphogluconate dehy 84.0 0.95 3.3E-05 50.7 5.4 33 434-467 5-37 (484)
446 3ktd_A Prephenate dehydrogenas 84.0 0.86 2.9E-05 48.7 4.8 32 435-467 10-41 (341)
447 2rir_A Dipicolinate synthase, 83.9 0.85 2.9E-05 47.2 4.7 32 434-466 158-189 (300)
448 2z1m_A GDP-D-mannose dehydrata 83.9 0.92 3.2E-05 46.3 4.9 32 435-467 5-37 (345)
449 2qyt_A 2-dehydropantoate 2-red 83.9 0.58 2E-05 47.9 3.3 32 435-466 10-46 (317)
450 3d3w_A L-xylulose reductase; u 83.9 0.91 3.1E-05 44.5 4.6 31 435-466 9-40 (244)
451 4id9_A Short-chain dehydrogena 83.8 0.96 3.3E-05 46.6 5.0 35 433-468 19-54 (347)
452 3gt0_A Pyrroline-5-carboxylate 83.8 0.94 3.2E-05 45.3 4.8 31 435-466 4-38 (247)
453 3pwz_A Shikimate dehydrogenase 83.6 0.89 3.1E-05 47.0 4.6 32 434-466 121-153 (272)
454 1w4x_A Phenylacetone monooxyge 83.6 0.82 2.8E-05 51.2 4.7 35 434-469 187-221 (542)
455 2izz_A Pyrroline-5-carboxylate 83.5 0.92 3.2E-05 47.4 4.8 33 434-467 23-59 (322)
456 3ko8_A NAD-dependent epimerase 83.4 0.99 3.4E-05 45.7 4.8 31 436-467 3-34 (312)
457 1edz_A 5,10-methylenetetrahydr 83.4 0.74 2.5E-05 49.1 3.9 33 433-466 177-210 (320)
458 2ydy_A Methionine adenosyltran 83.3 0.88 3E-05 46.2 4.4 31 435-466 4-35 (315)
459 3vh1_A Ubiquitin-like modifier 83.2 0.85 2.9E-05 52.5 4.6 35 432-467 326-361 (598)
460 2i6t_A Ubiquitin-conjugating e 83.2 0.91 3.1E-05 47.7 4.6 33 434-467 15-49 (303)
461 1np3_A Ketol-acid reductoisome 83.1 1 3.5E-05 47.7 4.9 32 435-467 18-49 (338)
462 4gx0_A TRKA domain protein; me 83.0 0.99 3.4E-05 50.7 5.0 35 434-469 349-383 (565)
463 2pd4_A Enoyl-[acyl-carrier-pro 83.0 0.86 2.9E-05 46.0 4.2 32 435-467 8-42 (275)
464 3o8q_A Shikimate 5-dehydrogena 82.8 0.94 3.2E-05 47.1 4.4 32 434-466 127-159 (281)
465 3oig_A Enoyl-[acyl-carrier-pro 82.7 0.99 3.4E-05 45.1 4.4 31 435-466 9-42 (266)
466 4gsl_A Ubiquitin-like modifier 82.6 0.95 3.2E-05 52.2 4.7 36 432-468 325-361 (615)
467 3gvi_A Malate dehydrogenase; N 82.6 1.2 3.9E-05 47.4 5.1 33 434-467 8-41 (324)
468 3pqe_A L-LDH, L-lactate dehydr 82.6 0.96 3.3E-05 48.1 4.5 31 435-466 7-39 (326)
469 1lqt_A FPRA; NADP+ derivative, 82.5 0.98 3.4E-05 49.7 4.7 50 648-700 265-328 (456)
470 1oju_A MDH, malate dehydrogena 82.5 0.98 3.3E-05 47.3 4.4 32 435-467 2-35 (294)
471 4ffl_A PYLC; amino acid, biosy 82.5 1.1 3.8E-05 47.1 4.9 34 435-469 3-36 (363)
472 2q3e_A UDP-glucose 6-dehydroge 82.4 0.85 2.9E-05 50.5 4.1 32 435-466 7-39 (467)
473 1y1p_A ARII, aldehyde reductas 82.3 1.1 3.7E-05 45.7 4.6 31 435-466 13-44 (342)
474 2bka_A CC3, TAT-interacting pr 82.3 1.2 4E-05 43.5 4.6 33 435-468 20-55 (242)
475 1y6j_A L-lactate dehydrogenase 82.2 1.1 3.8E-05 47.2 4.7 33 434-467 8-42 (318)
476 3fbt_A Chorismate mutase and s 82.1 0.91 3.1E-05 47.4 4.0 32 434-466 123-155 (282)
477 2wyu_A Enoyl-[acyl carrier pro 82.0 0.98 3.4E-05 45.2 4.1 32 435-467 10-44 (261)
478 1uay_A Type II 3-hydroxyacyl-C 82.0 1.3 4.3E-05 43.1 4.8 33 435-468 4-37 (242)
479 2ahr_A Putative pyrroline carb 82.0 0.98 3.4E-05 45.2 4.1 31 435-466 5-35 (259)
480 2cfc_A 2-(R)-hydroxypropyl-COM 82.0 1.2 4E-05 43.7 4.6 30 436-466 5-35 (250)
481 3tri_A Pyrroline-5-carboxylate 81.9 1.4 4.9E-05 45.2 5.4 33 434-467 4-39 (280)
482 3ldh_A Lactate dehydrogenase; 81.8 1.1 3.7E-05 48.0 4.5 32 434-466 22-55 (330)
483 3awd_A GOX2181, putative polyo 81.8 1.2 4.1E-05 44.0 4.6 31 435-466 15-46 (260)
484 3orf_A Dihydropteridine reduct 81.8 1.3 4.5E-05 44.1 4.9 33 435-468 24-57 (251)
485 3t4e_A Quinate/shikimate dehyd 81.8 1.1 3.7E-05 47.4 4.5 32 434-466 149-181 (312)
486 1gpj_A Glutamyl-tRNA reductase 81.7 1.1 3.8E-05 48.6 4.7 32 434-466 168-200 (404)
487 1qyc_A Phenylcoumaran benzylic 81.7 1.1 3.7E-05 45.3 4.3 32 435-467 6-38 (308)
488 4b4o_A Epimerase family protei 81.7 1.2 4.3E-05 45.0 4.8 32 435-467 2-34 (298)
489 2o7s_A DHQ-SDH PR, bifunctiona 81.5 0.9 3.1E-05 51.1 4.0 31 435-466 366-396 (523)
490 3k31_A Enoyl-(acyl-carrier-pro 81.4 1.1 3.7E-05 46.1 4.3 31 435-466 32-65 (296)
491 2cvz_A Dehydrogenase, 3-hydrox 81.4 1.1 3.7E-05 45.3 4.2 31 435-467 3-33 (289)
492 3dfu_A Uncharacterized protein 81.2 0.4 1.4E-05 48.8 0.9 31 435-466 8-38 (232)
493 3qiv_A Short-chain dehydrogena 81.2 1.3 4.4E-05 43.8 4.6 31 435-466 11-42 (253)
494 3k30_A Histamine dehydrogenase 81.2 0.94 3.2E-05 52.4 4.1 33 435-468 525-559 (690)
495 3qvo_A NMRA family protein; st 81.1 0.94 3.2E-05 44.5 3.5 32 435-467 25-58 (236)
496 1qsg_A Enoyl-[acyl-carrier-pro 81.0 0.99 3.4E-05 45.2 3.7 32 435-467 11-45 (265)
497 2wsb_A Galactitol dehydrogenas 80.9 1.3 4.6E-05 43.4 4.6 31 435-466 13-44 (254)
498 3i1j_A Oxidoreductase, short c 80.9 1.1 3.6E-05 44.2 3.8 30 436-466 17-47 (247)
499 3f1l_A Uncharacterized oxidore 80.9 1.4 4.6E-05 44.0 4.6 30 436-466 15-45 (252)
500 1yb4_A Tartronic semialdehyde 80.7 0.77 2.6E-05 46.6 2.8 28 436-464 6-33 (295)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=1.1e-37 Score=355.56 Aligned_cols=280 Identities=33% Similarity=0.460 Sum_probs=237.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC--CcccCCccccccc-cccccccccccccccccccccccee
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI--HSRIPGMSSVLSL-SEFDHAYLAEPSQFAGLGVRNARIK 509 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~--ss~~Pg~~~~~~~-~~l~~~y~s~p~~~g~l~l~~~~i~ 509 (720)
+||+||||||.+||++|.+|++..|++|||||||..... ...+|.+...... ..++|.|..+++.+ +.++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 589999999999999999999955999999999976522 2345554444443 67899998887765 6788899
Q ss_pred eccccccCCcccccchhhhcCCchhHHHHHHh-cCCCCChhHHHHHHHhhhhchhhhc------cccccccCcCCccccc
Q psy14408 510 ITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGYDETLKYFVKSEDYRSVIY------NESKAVHGTQGYLPVG 582 (720)
Q Consensus 510 ~~~G~~lGGgStvN~~~~~r~s~~d~~eWae~-g~~dWsydellpyF~s~e~~~~~sl------d~d~~v~~~~G~L~va 582 (720)
|.+|+++||+|.+|++++.|+...+++.|++. |..+|.|+++++||+++|.+..... ..+...++..|.+.+.
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999998 8899999999999999998763211 1233577888988888
Q ss_pred ccccccchHHHHHHHHHHHHc--CCCCCCCCCCccccccccccCCccccCcchhHHHHHHHHHHhcCCCeEEEcCeEEEE
Q psy14408 583 LFKNKENNIIREIFETSAQEL--GYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTK 660 (720)
Q Consensus 583 ~~~~~~~~~~~q~llea~rkl--G~~~~~d~ng~~~~~G~~~~~~g~~~G~k~~aa~a~L~~Aa~e~aGVkIi~gt~Vtk 660 (720)
..... ......++++++++ |++...+++++. ..|++.+...+..|.|..+..+||..++ ++.|++|++++.|++
T Consensus 158 ~~~~~--~~~~~~~~~a~~~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~R~sa~~ayL~p~~-~r~NL~Vlt~a~V~r 233 (566)
T 3fim_B 158 LPGFP--TPLDDRVLATTQEQSEEFFFNPDMGTGH-PLGISWSIASVGNGQRSSSSTAYLRPAQ-SRPNLSVLINAQVTK 233 (566)
T ss_dssp SCSSC--CTHHHHHHHHHHHTHHHHCBCSCGGGSC-CCEEEECCBSEETTEECCHHHHTHHHHT-TCTTEEEESSCEEEE
T ss_pred cCCCC--CHHHHHHHHHHHHHhcCCCccCCCCCCC-cceEEeeeeecCCCEEcCHHHHHhhhhc-cCCCeEEECCCEEEE
Confidence 77665 56788899999999 998877777766 6788888877878889999999999887 688999999999999
Q ss_pred EEEc---cC-CcEEEEEEEecCC-cEEEEEcCcEEEEccCCcchHHHHHHcCCCCccccccCCCC
Q psy14408 661 VIIN---DQ-NVATGVEYVNSKG-ETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720 (720)
Q Consensus 661 Il~e---~g-GrAtGV~v~dt~G-~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgpk~~L~~~gip 720 (720)
|+++ ++ ++|+||++.+..| +.++|+|+|+||||||+++||+|||.|||||+++|+++||+
T Consensus 234 Il~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~ 298 (566)
T 3fim_B 234 LVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGID 298 (566)
T ss_dssp EECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCC
T ss_pred EEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCC
Confidence 9997 23 7899999987545 77889998899999999999999999999999999999996
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=8.3e-37 Score=349.30 Aligned_cols=282 Identities=30% Similarity=0.401 Sum_probs=231.2
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC-C--cccCCccccccccccccccccccccccccccccc
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI-H--SRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNA 506 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~-s--s~~Pg~~~~~~~~~l~~~y~s~p~~~g~l~l~~~ 506 (720)
.+.+||+||||||.+||++|.+|++++|.+|||||||..... . ...+..+...++..++|.|..+++. ..++
T Consensus 16 ~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r 90 (583)
T 3qvp_A 16 SGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQ 90 (583)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSC
T ss_pred CCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCC
Confidence 346799999999999999999999976899999999973211 1 2233334444566789999887653 3567
Q ss_pred ceeeccccccCCcccccchhhhcCCchhHHHHHHhcCC-CCChhHHHHHHHhhhhchhhh-------ccccccccCcCCc
Q psy14408 507 RIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYN-GWGYDETLKYFVKSEDYRSVI-------YNESKAVHGTQGY 578 (720)
Q Consensus 507 ~i~~~~G~~lGGgStvN~~~~~r~s~~d~~eWae~g~~-dWsydellpyF~s~e~~~~~s-------ld~d~~v~~~~G~ 578 (720)
.+.|.+|+++||+|.+|++++.|+.+.+++.|++++.. +|.|+++++||+++|.+.... ...+...++..|.
T Consensus 91 ~~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gp 170 (583)
T 3qvp_A 91 TALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGT 170 (583)
T ss_dssp CCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSS
T ss_pred eeeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCC
Confidence 88999999999999999999999999999999999877 999999999999999875211 1123457888888
Q ss_pred cccccc---ccccchHHHHHHHHHHHHcCCCCCCCCCCccccccccccCCccc-cCcchhHHHHHHHHHHhcCCCeEEEc
Q psy14408 579 LPVGLF---KNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTR-YGLRFSAADAYLTPIAGKRTNLYVLK 654 (720)
Q Consensus 579 L~va~~---~~~~~~~~~q~llea~rklG~~~~~d~ng~~~~~G~~~~~~g~~-~G~k~~aa~a~L~~Aa~e~aGVkIi~ 654 (720)
+.+... ... ....+.++++++++|++...+++++. ..|+..+..... .|.|..+..+||..++ ++.|++|++
T Consensus 171 l~v~~~~~~~~~--~~~~~~~~~a~~~~G~~~~~D~n~~~-~~G~~~~~~t~~~~g~R~saa~ayL~p~~-~r~NL~V~t 246 (583)
T 3qvp_A 171 VHAGPRDTGDDY--SPIVKALMSAVEDRGVPTKKDFGCGD-PHGVSMFPNTLHEDQVRSDAAREWLLPNY-QRPNLQVLT 246 (583)
T ss_dssp EEEBCCCCSSCB--CTHHHHHHHHHHTTTCCBCCCTTSSC-CCEEECCCBSBCTTCBBCCHHHHHTTTTT-TCTTEEEEC
T ss_pred EEecCCCCcccC--CHHHHHHHHHHHHcCCCcCCCCCCCC-CceecccceeEcCCCcEecHHHHHHHHhh-cCCCcEEEc
Confidence 887665 222 35678889999999999877888777 677776665543 5778888888998777 678999999
Q ss_pred CeEEEEEEEcc---CCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCCccccccCCCC
Q psy14408 655 RSKVTKVIIND---QNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720 (720)
Q Consensus 655 gt~VtkIl~e~---gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgpk~~L~~~gip 720 (720)
++.|++|+++. +++|+||++.+.+|+.++|+|+|+||||||+++||+|||.|||||+++|+++||+
T Consensus 247 ~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~ 315 (583)
T 3qvp_A 247 GQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGID 315 (583)
T ss_dssp SCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCC
T ss_pred CCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCC
Confidence 99999999983 5789999998557888899998899999999999999999999999999999996
No 3
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=2.9e-34 Score=319.82 Aligned_cols=280 Identities=32% Similarity=0.461 Sum_probs=222.1
Q ss_pred ccCCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC-cccCCccccccccccccccccccccccccccccc
Q psy14408 428 VKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH-SRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNA 506 (720)
Q Consensus 428 I~~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s-s~~Pg~~~~~~~~~l~~~y~s~p~~~g~l~l~~~ 506 (720)
++...+|||||||||.+|+++|.+|||..|++|||||||+..... ...|..+....+..++|.|..+++.+ +.++
T Consensus 12 ~~~~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~ 87 (526)
T 3t37_A 12 VEHAPNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGR 87 (526)
T ss_dssp -----CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTB
T ss_pred ccCCCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCC
Confidence 445568999999999999999999999548999999999765322 23344455556677889988877655 6678
Q ss_pred ceeeccccccCCcccccchhhhcCCchhHHHHHHh-cCCCCChhHHHHHHHhhhhchhhhccccccccCcCCcccccccc
Q psy14408 507 RIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFK 585 (720)
Q Consensus 507 ~i~~~~G~~lGGgStvN~~~~~r~s~~d~~eWae~-g~~dWsydellpyF~s~e~~~~~sld~d~~v~~~~G~L~va~~~ 585 (720)
.+.|.+|+++||+|.+|++++.|....+|+.|.+. +..+|.|+++++||+++|...... ...+...|.+.+....
T Consensus 88 ~~~~~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~----~~~~~~~g~~~~~~~~ 163 (526)
T 3t37_A 88 AHHWARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGG----DGIHGKGGPLPIHLPA 163 (526)
T ss_dssp CCEECCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTT----SSSSCSSCSEECBCCS
T ss_pred eEeccCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCC----ccccCcCCCcCccccc
Confidence 89999999999999999999999999999999874 667899999999999999776432 1244555655444332
Q ss_pred cccchHHHHHHHHHHHHcCCCCCCCCCCccccccccccCCccccCcchhHHHHHHHHHHhcCCCeEEEcCeEEEEEEEcc
Q psy14408 586 NKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND 665 (720)
Q Consensus 586 ~~~~~~~~q~llea~rklG~~~~~d~ng~~~~~G~~~~~~g~~~G~k~~aa~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~ 665 (720)
.. .....+.++++.+++|+....+.+... ..+.+.+...+..|.+......++..+++.+.+++|++++.|++|+++
T Consensus 164 ~~-~~p~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~- 240 (526)
T 3t37_A 164 DE-VSPLARAFIEAGASLGLPRLEGHNSGE-MIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLE- 240 (526)
T ss_dssp TT-SCHHHHHHHHHHHHTTCCBCSSSCSSC-CBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE-
T ss_pred cc-CCHHHHHHHHHHHHcCCCcccCCCCCc-ccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEec-
Confidence 22 135677888999999998876666655 566666677777888888887887665535789999999999999999
Q ss_pred CCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCCccccccCCCC
Q psy14408 666 QNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720 (720)
Q Consensus 666 gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgpk~~L~~~gip 720 (720)
+++|+||++.+ .++..+++|+ +||||||+++|++||++|||+++++|+++||+
T Consensus 241 ~~~a~gv~~~~-~~~~~~~~a~-~VILsAGai~SP~LLl~SGig~~~~l~~~gi~ 293 (526)
T 3t37_A 241 GNQVRSLEVVG-RQGSAEVFAD-QIVLCAGALESPALLMRSGIGPHDVLDAAGVG 293 (526)
T ss_dssp TTEEEEEEEEE-TTEEEEEEEE-EEEECSHHHHHHHHHHHTTEECHHHHHHHTCC
T ss_pred CCeEEEEEEEe-cCceEEEeec-ceEEcccccCCcchhhhccCCchhhhhccCCC
Confidence 89999999987 4556788885 79999999999999999999999999998875
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=2.9e-34 Score=328.12 Aligned_cols=280 Identities=30% Similarity=0.445 Sum_probs=224.9
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC--cc-cCCcccccccccccccccccccccccccccccc
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH--SR-IPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNAR 507 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s--s~-~Pg~~~~~~~~~l~~~y~s~p~~~g~l~l~~~~ 507 (720)
+.++||||||||.+|+++|.+|+++.|++|+|||||...... .. +|..+...++....|.+..++ .+.++.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~ 95 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRT 95 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCce
Confidence 467999999999999999999999339999999999765322 12 444443344455678776554 246678
Q ss_pred eeeccccccCCcccccchhhhcCCchhHHHHHHh-cCCCCChhHHHHHHHhhhhchhhh-------ccccccccCcCCcc
Q psy14408 508 IKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGYDETLKYFVKSEDYRSVI-------YNESKAVHGTQGYL 579 (720)
Q Consensus 508 i~~~~G~~lGGgStvN~~~~~r~s~~d~~eWae~-g~~dWsydellpyF~s~e~~~~~s-------ld~d~~v~~~~G~L 579 (720)
+.|.+|+++||+|.+|++++.|....+|+.|.+. |..+|.|+++++||+++|.+.... ...+...++..|.+
T Consensus 96 ~~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl 175 (587)
T 1gpe_A 96 NNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTV 175 (587)
T ss_dssp CEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSE
T ss_pred eeeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCE
Confidence 8999999999999999999999999999999998 889999999999999999887431 11133456677887
Q ss_pred ccccc---ccccchHHHHHHHHHHHHcCCCCCCCCCCccccccccccCCcc-ccCcchhHHHHHHHHHHhcCCCeEEEcC
Q psy14408 580 PVGLF---KNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMT-RYGLRFSAADAYLTPIAGKRTNLYVLKR 655 (720)
Q Consensus 580 ~va~~---~~~~~~~~~q~llea~rklG~~~~~d~ng~~~~~G~~~~~~g~-~~G~k~~aa~a~L~~Aa~e~aGVkIi~g 655 (720)
.+... ... ....+.+.++++++|++...+.+++. ..|++.+...+ ..|.|+.+..++|..++ ++.|++|+++
T Consensus 176 ~v~~~~~~~~~--~~~~~~~~~a~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~~g~R~sa~~~~l~~~~-~~~nl~i~~~ 251 (587)
T 1gpe_A 176 QSGARDNGQPW--SPIMKALMNTVSALGVPVQQDFLCGH-PRGVSMIMNNLDENQVRVDAARAWLLPNY-QRSNLEILTG 251 (587)
T ss_dssp EEBCCCCSSCB--CTHHHHHHHHHHHTTCCBSCCTTSSC-CCEEECCEESBCTTCCBCCHHHHHTTTTT-TCTTEEEEES
T ss_pred EEccCCCcCCC--CHHHHHHHHHHHHcCCCcCCCCCCCC-CCEEEecceEECCCCcccCHHHHHHHHhh-cCCCcEEEcC
Confidence 77633 122 45778899999999998877777766 56776655433 35788888888997666 5789999999
Q ss_pred eEEEEEEEcc-C--CcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCCccccccCCCC
Q psy14408 656 SKVTKVIIND-Q--NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720 (720)
Q Consensus 656 t~VtkIl~e~-g--GrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgpk~~L~~~gip 720 (720)
+.|++|++++ + ++|+||++.+.+|+..+|+|+|+||||||++++++||++|||||+++|+++||+
T Consensus 252 ~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~ 319 (587)
T 1gpe_A 252 QMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVT 319 (587)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCC
T ss_pred CEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCC
Confidence 9999999972 1 589999998556877899996689999999999999999999999999999996
No 5
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=2.8e-34 Score=328.12 Aligned_cols=275 Identities=27% Similarity=0.445 Sum_probs=217.2
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCC-CcEEEEccCCCCC---CCcccCCccccccccccccccccccccccccccccc
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTP---IHSRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNA 506 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G-~KVLVLEKG~~~~---~ss~~Pg~~~~~~~~~l~~~y~s~p~~~g~l~l~~~ 506 (720)
..+||+||||||.+||++|.+|+++ | .+|||||||.... ....+|..+....+..++|.|..+ +.++
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~-~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~--------~~~r 74 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAEN-PNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT--------MVRR 74 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTS-TTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE--------EEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE--------ECCc
Confidence 3569999999999999999999999 6 7999999997621 123455555556667788888655 2334
Q ss_pred cee------eccccccCCcccccchhhhcCCchhHHHHHHhcCCCCChhHHHHHHHhhhhchhhhc--cccccccCcCCc
Q psy14408 507 RIK------ITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKYFVKSEDYRSVIY--NESKAVHGTQGY 578 (720)
Q Consensus 507 ~i~------~~~G~~lGGgStvN~~~~~r~s~~d~~eWae~g~~dWsydellpyF~s~e~~~~~sl--d~d~~v~~~~G~ 578 (720)
.+. |.+|+++||+|.+|++++.|+...+++.|++.|..+|.|+++++||++.|.+..... +.+...++..|.
T Consensus 75 ~~~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gp 154 (577)
T 3q9t_A 75 DDYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGP 154 (577)
T ss_dssp TTEEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCS
T ss_pred cccccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCC
Confidence 444 899999999999999999999999999999998899999999999999987753211 111235677888
Q ss_pred cccccccccc-chHHHHHHHHHHHHcCCCCCCCCCCccccccccccCCccccCcchhHHHHHHHHHHhcCCCeEEEcCeE
Q psy14408 579 LPVGLFKNKE-NNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSK 657 (720)
Q Consensus 579 L~va~~~~~~-~~~~~q~llea~rklG~~~~~d~ng~~~~~G~~~~~~g~~~G~k~~aa~a~L~~Aa~e~aGVkIi~gt~ 657 (720)
+.+....... .....+.++++++++|++...+++++. ..|+......+..|.+..+. .++ + ++.|++|++++.
T Consensus 155 l~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~R~s~~-~~l---~-~r~Nl~v~~~a~ 228 (577)
T 3q9t_A 155 IPISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGE-MDGLTHCCDTIYRGQRSGSF-LFV---K-NKPNITIVPEVH 228 (577)
T ss_dssp EEEEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSC-CCEEEECEESEETTEECCGG-GGS---S-SCTTEEEECSEE
T ss_pred EEeeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCC-cCeEEeecceecCCeEeeHH-HHH---h-cCCCeEEEcCcE
Confidence 8776644320 023566778888999998877777766 67776666556566665543 232 3 477999999999
Q ss_pred EEEEEEcc-CCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCCccccccCCCC
Q psy14408 658 VTKVIIND-QNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720 (720)
Q Consensus 658 VtkIl~e~-gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgpk~~L~~~gip 720 (720)
|++|+++. +++|+||++.+.+|+.++|+|+|+||||||++.|++||+.|||||+++|+++||+
T Consensus 229 v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~ 292 (577)
T 3q9t_A 229 SKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGIN 292 (577)
T ss_dssp EEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCC
T ss_pred EEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCC
Confidence 99999983 5789999998755888899998899999999999999999999999999999996
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1e-32 Score=312.65 Aligned_cols=277 Identities=29% Similarity=0.407 Sum_probs=221.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC-C-cccCCccccccccccccccccccccccccccccccee
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI-H-SRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNARIK 509 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~-s-s~~Pg~~~~~~~~~l~~~y~s~p~~~g~l~l~~~~i~ 509 (720)
.++||||||||.+|+++|.+|++++|++|+|||||..... . ...+..+....+....|.+...++.. .++.+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~ 86 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMR 86 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEE
Confidence 4699999999999999999999976899999999976533 1 23333332233445677776554332 456788
Q ss_pred eccccccCCcccccchhhhcCCchhHHHHHH-hcCCCCChhHHHHHHHhhhhchhhhccccccccCcCCccccccccccc
Q psy14408 510 ITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKE 588 (720)
Q Consensus 510 ~~~G~~lGGgStvN~~~~~r~s~~d~~eWae-~g~~dWsydellpyF~s~e~~~~~sld~d~~v~~~~G~L~va~~~~~~ 588 (720)
|.+|+++||++.+|++++.|....+++.|.+ .|..+|.|+++++||+++|.+.... + +...++..|.+.+......
T Consensus 87 ~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~-~-~~~~~g~~Gpl~v~~~~~~- 163 (546)
T 2jbv_A 87 HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAG-P-DAPHHGDSGPVHLMNVPPK- 163 (546)
T ss_dssp ECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCB-T-TBTTSCBSCSEEEEECCSC-
T ss_pred eecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCC-C-ccccCCCCCCEEEecCCCC-
Confidence 9999999999999999999999999999998 7888999999999999999876411 0 0235666787777554444
Q ss_pred chHHHHHHHHHHHHcCCCCCCCCCCcc-ccccccccCCccc-cCcchhHHHHHHHHHHhcCCCeEEEcCeEEEEEEEccC
Q psy14408 589 NNIIREIFETSAQELGYPCPKDMNDRY-VDVGFAELPGMTR-YGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQ 666 (720)
Q Consensus 589 ~~~~~q~llea~rklG~~~~~d~ng~~-~~~G~~~~~~g~~-~G~k~~aa~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~g 666 (720)
....+.+.++++++|++.. +.++.. .+.|+..+..+|. .|.|..+..++|..++ ++.|++|++++.|++|+++ +
T Consensus 164 -~~~~~~~~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~-~~~~~~i~~~~~V~~i~~~-~ 239 (546)
T 2jbv_A 164 -DPTGVALLDACEQAGIPRA-KFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIV-EQENFTLLTGLRARQLVFD-A 239 (546)
T ss_dssp -CHHHHHHHHHHHHTTCCBC-CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGT-TCTTEEEECSCEEEEEEEC-T
T ss_pred -CHHHHHHHHHHHHCCCCcc-CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHh-cCCCcEEEeCCEEEEEEEC-C
Confidence 5678889999999999877 655432 1456667777777 7888888888998876 5789999999999999998 6
Q ss_pred -CcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCCCccccccCCCC
Q psy14408 667 -NVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720 (720)
Q Consensus 667 -GrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgpk~~L~~~gip 720 (720)
++|+||++.+. +|+..+|+|+|+||||||++++++||++||||++++|+++||+
T Consensus 240 ~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~ 295 (546)
T 2jbv_A 240 DRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIE 295 (546)
T ss_dssp TSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCC
T ss_pred CCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCc
Confidence 89999999873 2777889998689999999999999999999999999999985
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.94 E-value=4.1e-27 Score=266.16 Aligned_cols=266 Identities=27% Similarity=0.350 Sum_probs=179.7
Q ss_pred cccccccccccCCCCCCCCcccCCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCCc--ccCCcccccccc
Q psy14408 408 EKERYNIYRSVIYPPDMTPYVKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHS--RIPGMSSVLSLS 485 (720)
Q Consensus 408 ~~~~y~flq~~~~P~~~~~~I~~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~ss--~~Pg~~~~~~~~ 485 (720)
..+.|.|++.. . ......+|||||||||.+|+++|.+|++ |.+|||||||....... ..+..+.....
T Consensus 8 ~~~~~~~~~~~---~----~~~~~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~- 77 (536)
T 1ju2_A 8 DFSYLSFAYDA---T----DLELEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQ- 77 (536)
T ss_dssp CCGGGGGEEEG---G----GSCSEEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHH-
T ss_pred CcccCccccCc---c----cccccCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhcc-
Confidence 34567777751 1 1123457999999999999999999998 89999999997542111 11111100000
Q ss_pred cccccccccccccccccccccceeeccccccCCcccccchhhhcCCchhHHHHHHhcCCCCChhHHHHHHHhhhhchhhh
Q psy14408 486 EFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKYFVKSEDYRSVI 565 (720)
Q Consensus 486 ~l~~~y~s~p~~~g~l~l~~~~i~~~~G~~lGGgStvN~~~~~r~s~~d~~eWae~g~~dWsydellpyF~s~e~~~~~s 565 (720)
...| |...++.. +.++.+.+.+|+++||++.+|++++.|....+++.+ +.+|.|++++++|+++|.....
T Consensus 78 ~~~~-~~t~~q~~----~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~----G~~W~~~~~~p~~~~~e~~~~~- 147 (536)
T 1ju2_A 78 QEDD-GKTPVERF----VSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSAS----GVDWDMDLVNQTYEWVEDTIVY- 147 (536)
T ss_dssp SCCC-SSSSEEEE----ECTTSCEEEEECBTTGGGGTSCCEECBCCTTSSTTS----SSCCCHHHHHHHHHHHHHHHCB-
T ss_pred CCCc-CcCCCccc----cCCCcceeecceeccccccccCeEEEeCCHHHHhhc----cCCCChHHHHHHHHhhhcccCC-
Confidence 1112 22222222 334567889999999999999999999988877532 2359999999999999865421
Q ss_pred ccccccccCcCCcccccccccccchHHHHHHHHHHHHcCCCCCC----CCCCccccccccccCCccccCcchhHHHHHHH
Q psy14408 566 YNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPK----DMNDRYVDVGFAELPGMTRYGLRFSAADAYLT 641 (720)
Q Consensus 566 ld~d~~v~~~~G~L~va~~~~~~~~~~~q~llea~rklG~~~~~----d~ng~~~~~G~~~~~~g~~~G~k~~aa~a~L~ 641 (720)
. ... ....+.+.++++++|+.... +...+. .+|.+.+ +..|.+..+.. ++.
T Consensus 148 -------~-----------~~~--~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~-~~g~~~~---~~~g~r~s~~~-~~~ 202 (536)
T 1ju2_A 148 -------K-----------PNS--QSWQSVTKTAFLEAGVHPNHGFSLDHEEGT-RITGSTF---DNKGTRHAADE-LLN 202 (536)
T ss_dssp -------C-----------CCC--CHHHHHHHHHHHHTTCCCEEEECCBCCSEE-EECEESB---CTTSBBCCGGG-GGG
T ss_pred -------C-----------CCC--CcHHHHHHHHHHHcCCCCCCCcccCCCCCc-eeeeEEE---CCCCeEecHHH-hhh
Confidence 0 001 23456777888888885321 111111 1222221 13455554443 554
Q ss_pred HHHhcCCCeEEEcCeEEEEEEEccC--CcEEEEEEEecCCcEEEEE--cCcEEEEccCCcchHHHHHHcCCCCccccccC
Q psy14408 642 PIAGKRTNLYVLKRSKVTKVIINDQ--NVATGVEYVNSKGETVRVT--ANKEVILTAGAIANAQLLLLSGIGPKAHLDEV 717 (720)
Q Consensus 642 ~Aa~e~aGVkIi~gt~VtkIl~e~g--GrAtGV~v~dt~G~e~tIk--AkK~VVVAAGa~~Sp~LLl~SGIgpk~~L~~~ 717 (720)
.+ ++.|++|++++.|++|+++++ ++|+||++.+.+|++.+++ ++|+||||||++++++||++||||++++|+++
T Consensus 203 ~~--~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~ 280 (536)
T 1ju2_A 203 KG--NSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSL 280 (536)
T ss_dssp GS--CTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHT
T ss_pred hh--cCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhc
Confidence 43 478999999999999999822 4899999987557655663 54689999999999999999999999999999
Q ss_pred CCC
Q psy14408 718 KIP 720 (720)
Q Consensus 718 gip 720 (720)
||+
T Consensus 281 gi~ 283 (536)
T 1ju2_A 281 NIP 283 (536)
T ss_dssp TCC
T ss_pred CCc
Confidence 985
No 8
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.94 E-value=2.5e-26 Score=257.76 Aligned_cols=260 Identities=21% Similarity=0.219 Sum_probs=187.3
Q ss_pred ccCCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCCcccCC---ccccc-ccccccccccccccccc----
Q psy14408 428 VKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPG---MSSVL-SLSEFDHAYLAEPSQFA---- 499 (720)
Q Consensus 428 I~~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~ss~~Pg---~~~~~-~~~~l~~~y~s~p~~~g---- 499 (720)
+..+.++|+||||||.+|+++|.+|++. |++|+|||++..... ..+. +.... ......|.+..+++..+
T Consensus 6 ~~~~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~ 82 (507)
T 1coy_A 6 LADGDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMG 82 (507)
T ss_dssp CCTTCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTT
T ss_pred CCcCCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccc
Confidence 4455679999999999999999999998 999999999975431 1221 11111 12246777766543110
Q ss_pred -------cccc------cccceeeccccccCCcccccchhhhcCCchhHHHHHHhcCCCCChhHHH-HHHHhhhhchhhh
Q psy14408 500 -------GLGV------RNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL-KYFVKSEDYRSVI 565 (720)
Q Consensus 500 -------~l~l------~~~~i~~~~G~~lGGgStvN~~~~~r~s~~d~~eWae~g~~dWsydell-pyF~s~e~~~~~s 565 (720)
.... .++.+.|.+|+++||+|.+|++++.|....+|+.|.. .|.|++++ +||+++|.+....
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~----~w~~~~l~~pyy~~~E~~~~~~ 158 (507)
T 1coy_A 83 FGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILP----SVDSNEMYNKYFPRANTGLGVN 158 (507)
T ss_dssp BSCCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCT----TSCHHHHHHTHHHHHHHHHTCB
T ss_pred cccccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCC----ccchhcchhHHHHHHHHHhCCC
Confidence 0111 4567889999999999999999999999999999964 68999999 9999999876421
Q ss_pred ccccccccCcCCcccccccccccchHHHHHHHHHHHHcCC-----CCCCCCCCc--------cccccccccCCccccCcc
Q psy14408 566 YNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGY-----PCPKDMNDR--------YVDVGFAELPGMTRYGLR 632 (720)
Q Consensus 566 ld~d~~v~~~~G~L~va~~~~~~~~~~~q~llea~rklG~-----~~~~d~ng~--------~~~~G~~~~~~g~~~G~k 632 (720)
. ..+... .... . ....+.+.++++++|+ +...++++. ..+..++.|..+|..| |
T Consensus 159 ~--------~~~~~~-~~~~-~--~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R 225 (507)
T 1coy_A 159 N--------IDQAWF-ESTE-W--YKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-K 225 (507)
T ss_dssp C--------CCHHHH-HHCG-G--GHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-B
T ss_pred C--------CCCccc-cccc-c--chHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-C
Confidence 0 000000 0000 1 2456778889999999 433333211 1122334445678888 8
Q ss_pred hhHHHHHHHHHHhcCCCeEEEcCeEEEEEEEccCC-cEEEEEEEecCC---cEEEEEcCcEEEEccCCcchHHHHHHcC-
Q psy14408 633 FSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN-VATGVEYVNSKG---ETVRVTANKEVILTAGAIANAQLLLLSG- 707 (720)
Q Consensus 633 ~~aa~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gG-rAtGV~v~dt~G---~e~tIkAkK~VVVAAGa~~Sp~LLl~SG- 707 (720)
..+..++|..++ ++.|++|++++.|++|++++++ +|+||++.+.+| ++.+|+|+ +||||||++.+++||++||
T Consensus 226 ~s~~~~~l~~a~-~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~ 303 (507)
T 1coy_A 226 KSLDKTYLAQAA-ATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVSMKA 303 (507)
T ss_dssp CCTTTTHHHHHH-HTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHH-hcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHhccc
Confidence 888888998887 4557999999999999998324 799999986445 36789997 7999999999999999999
Q ss_pred CC
Q psy14408 708 IG 709 (720)
Q Consensus 708 Ig 709 (720)
++
T Consensus 304 iG 305 (507)
T 1coy_A 304 QG 305 (507)
T ss_dssp TT
T ss_pred CC
Confidence 66
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.94 E-value=5.4e-26 Score=254.76 Aligned_cols=257 Identities=17% Similarity=0.147 Sum_probs=184.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC-Cc--ccCCcccccccccccccccccccc-----------
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI-HS--RIPGMSSVLSLSEFDHAYLAEPSQ----------- 497 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~-ss--~~Pg~~~~~~~~~l~~~y~s~p~~----------- 497 (720)
.++||||||||.+|+++|.+|++. |++|+|||++..... .. ..+... ........|.+...++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 468999999999999999999998 999999999975432 21 111111 11123456776654431
Q ss_pred ---cccc----cccccceeeccccccCCcccccchhhhcCCchhHHHHHHhcCCCCChhHHH-HHHHhhhhchhhhcccc
Q psy14408 498 ---FAGL----GVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL-KYFVKSEDYRSVIYNES 569 (720)
Q Consensus 498 ---~g~l----~l~~~~i~~~~G~~lGGgStvN~~~~~r~s~~d~~eWae~g~~dWsydell-pyF~s~e~~~~~sld~d 569 (720)
.... ...++.+.|.+|+++||+|.+|++++.|....+|+.|.. .|.|++++ +||+++|.+......
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~----~w~~~~l~~pyy~~~E~~~~~~~~-- 155 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILP----RVDSSEMYDRYFPRANSMLRVNHI-- 155 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCT----TSCHHHHHHTHHHHHHHHHTCBCC--
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhcc----ccchhhhhhHHHHHHHHHhCCCCC--
Confidence 0011 115567889999999999999999999999999999963 78999999 999999987642110
Q ss_pred ccccCcCCcccccccccccchHHHHHHHHHHHHcCC-----CCCCCCCCc--------cccccccccCCccccCcchhHH
Q psy14408 570 KAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGY-----PCPKDMNDR--------YVDVGFAELPGMTRYGLRFSAA 636 (720)
Q Consensus 570 ~~v~~~~G~L~va~~~~~~~~~~~q~llea~rklG~-----~~~~d~ng~--------~~~~G~~~~~~g~~~G~k~~aa 636 (720)
.+.+. .... . ....+.+.++++++|+ +...++++. ..+..+..|..+|..| |..+.
T Consensus 156 ------~~~~~-~~~~-~--~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~ 224 (504)
T 1n4w_A 156 ------DTKWF-EDTE-W--YKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLD 224 (504)
T ss_dssp ------CHHHH-HHCG-G--GHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTT
T ss_pred ------Ccccc-cCCC-c--chHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHH
Confidence 00000 0000 1 2456778889999998 333333211 1123334455678888 88888
Q ss_pred HHHHHHHHhcCCCeEEEcCeEEEEEEEcc-CCcEEEEEEEecCC---cEEEEEcCcEEEEccCCcchHHHHHHcC-CC
Q psy14408 637 DAYLTPIAGKRTNLYVLKRSKVTKVIIND-QNVATGVEYVNSKG---ETVRVTANKEVILTAGAIANAQLLLLSG-IG 709 (720)
Q Consensus 637 ~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~-gGrAtGV~v~dt~G---~e~tIkAkK~VVVAAGa~~Sp~LLl~SG-Ig 709 (720)
.++|..++ ++.|++|++++.|++|++++ +++++||++.+.+| ++.+|+|+ +||||||++.+++||++|| ++
T Consensus 225 ~~~l~~a~-~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig 300 (504)
T 1n4w_A 225 KTYLAAAL-GTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRARDTG 300 (504)
T ss_dssp TTHHHHHH-HTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHH-hcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhccccC
Confidence 88998887 45569999999999999983 24899999986456 56789997 7999999999999999999 55
No 10
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.92 E-value=3.9e-25 Score=249.24 Aligned_cols=260 Identities=25% Similarity=0.311 Sum_probs=175.2
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCCc--ccCCccc--c---ccc-ccc-cccccccccccccc
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHS--RIPGMSS--V---LSL-SEF-DHAYLAEPSQFAGL 501 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~ss--~~Pg~~~--~---~~~-~~l-~~~y~s~p~~~g~l 501 (720)
+.+|||||||||.+|+++|.+|+++ |++|+|||||....... .....+. . ... .++ ...+.. .. .
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~-~--- 78 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTD-SN-P--- 78 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTC-SC-C---
T ss_pred CCceeEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcC-CC-c---
Confidence 4578999999999999999999999 99999999996542110 0000000 0 000 000 000000 00 0
Q ss_pred cccccceeeccccccCCcccccchhhhcCCchhHHH---HHHhcCCCCChhHHHHHHHhhhhchhhhccccccccCcCCc
Q psy14408 502 GVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYEN---FAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGY 578 (720)
Q Consensus 502 ~l~~~~i~~~~G~~lGGgStvN~~~~~r~s~~d~~e---Wae~g~~dWsydellpyF~s~e~~~~~sld~d~~v~~~~G~ 578 (720)
......+.+.+|+++||++.+|++++.+....+++. |. .+|.|++ ++|++++...... ......|.
T Consensus 79 ~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~----~~w~~~~--p~~~k~e~~~~~~-----~~~~~~g~ 147 (546)
T 1kdg_A 79 FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWP----SSWTNHA--PYTSKLSSRLPST-----DHPSTDGQ 147 (546)
T ss_dssp TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCC----GGGSCCH--HHHHHHHHHSCCB-----SCCSTTSC
T ss_pred cccccccccccceeecccccccceEEecCChHHhcCcccCc----cccCccc--HHHHHHHhcCCCC-----ccCCCCCC
Confidence 011123556789999999999999999998888876 73 3677777 8999887644210 01222232
Q ss_pred ccccccccccchHHHHHHHHHHHHcCCCCCCCCCCc-cccccccccCCccccCcchhHHHHHHHHHHhcCCCeEEEcCeE
Q psy14408 579 LPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDR-YVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSK 657 (720)
Q Consensus 579 L~va~~~~~~~~~~~q~llea~rklG~~~~~d~ng~-~~~~G~~~~~~g~~~G~k~~aa~a~L~~Aa~e~aGVkIi~gt~ 657 (720)
. +. ....+.+.++++++|+......... ....|+..+...+..|.|..+..+++..++ ++.|++|++++.
T Consensus 148 ~------~~--~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~-~~~~~~i~~~~~ 218 (546)
T 1kdg_A 148 R------YL--EQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTAL-ARPNFTFKTNVM 218 (546)
T ss_dssp C------CS--CHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHH-TCTTEEEECSCC
T ss_pred c------cC--CHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHh-hCCCcEEEeCCE
Confidence 1 11 2355677788888998643211111 113455555666677888888878998887 567999999999
Q ss_pred EEEEEEccCCcEEEEEEEec-CCc--EEEEEcCcEEEEccCCcchHHHHHHcCCCCccccccC
Q psy14408 658 VTKVIINDQNVATGVEYVNS-KGE--TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEV 717 (720)
Q Consensus 658 VtkIl~e~gGrAtGV~v~dt-~G~--e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgpk~~L~~~ 717 (720)
|++|+++ +++|+||++.+. +|+ +.++.+.|+||||||++++++||++|||+++++|+++
T Consensus 219 V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~ 280 (546)
T 1kdg_A 219 VSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTV 280 (546)
T ss_dssp EEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHH
T ss_pred EEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHh
Confidence 9999998 889999998764 354 3345444589999999999999999999999999887
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.64 E-value=2.9e-16 Score=180.93 Aligned_cols=87 Identities=23% Similarity=0.364 Sum_probs=72.1
Q ss_pred chhHHHHHHHHH------HhcCCCeEEEcCeEEEEEEEcc-CCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHH
Q psy14408 632 RFSAADAYLTPI------AGKRTNLYVLKRSKVTKVIIND-QNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 703 (720)
Q Consensus 632 k~~aa~a~L~~A------a~e~aGVkIi~gt~VtkIl~e~-gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LL 703 (720)
++.+...++..+ + ++.|++|++++.|++|+.++ +++|+||++.+. +|++.+|+|+ .||||+|++.++++|
T Consensus 252 r~s~~~~~l~~~~~l~~~~-~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~lL 329 (623)
T 3pl8_A 252 EWSSANTVFDLQNRPNTDA-PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQLL 329 (623)
T ss_dssp EECCHHHHCCCCCEEETTE-EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHHH
T ss_pred ccchHHhhhhhhhcchhhc-cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHHH
Confidence 334445566544 3 44599999999999999972 348999999874 6777889997 799999999999999
Q ss_pred HHcCCCCccccccCCCC
Q psy14408 704 LLSGIGPKAHLDEVKIP 720 (720)
Q Consensus 704 l~SGIgpk~~L~~~gip 720 (720)
+.||||++.+|+.+||+
T Consensus 330 ~~sgiG~~~~l~~~~i~ 346 (623)
T 3pl8_A 330 VNSGFGQLGRPNPANPP 346 (623)
T ss_dssp HTTTSSCCSSCCTTSCC
T ss_pred HhcCCCccccccccCCC
Confidence 99999999999999985
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.64 E-value=3.9e-15 Score=166.60 Aligned_cols=64 Identities=20% Similarity=0.331 Sum_probs=50.0
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcch-HHHH
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN-AQLL 703 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~S-p~LL 703 (720)
..|.+.+ ++.|++|+++++|++|+.+++|+|+||++.+ +|+..+|+|+|.||||+|++.. +.++
T Consensus 206 ~~L~~~~-~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~~m~ 270 (510)
T 4at0_A 206 KPLVETA-EKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYNDKMI 270 (510)
T ss_dssp HHHHHHH-HHTTCEEECSEEEEEEEECTTCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred HHHHHHH-HHcCCEEEecCEeEEEEECCCCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCHHHH
Confidence 3444444 3679999999999999987458999999887 5666789996469999999874 4443
No 13
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.59 E-value=4.2e-15 Score=155.23 Aligned_cols=65 Identities=12% Similarity=0.087 Sum_probs=48.7
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHc-CCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLS-GIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~S-GIg 709 (720)
.|.+++ ++.|++|+++++|++|+.+ ++.+.+|++. +|+..+++|+ .||+|+|+ |+..|+... |+.
T Consensus 155 ~l~~~~-~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~--~g~~~~~~a~-~VV~A~G~-~s~~l~~~~~g~~ 220 (369)
T 3dme_A 155 AYQGDA-ESDGAQLVFHTPLIAGRVR-PEGGFELDFG--GAEPMTLSCR-VLINAAGL-HAPGLARRIEGIP 220 (369)
T ss_dssp HHHHHH-HHTTCEEECSCCEEEEEEC-TTSSEEEEEC--TTSCEEEEEE-EEEECCGG-GHHHHHHTEETSC
T ss_pred HHHHHH-HHCCCEEECCCEEEEEEEc-CCceEEEEEC--CCceeEEEeC-EEEECCCc-chHHHHHHhcCCC
Confidence 344444 4789999999999999987 4443445543 3655689997 59999997 688999888 875
No 14
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.57 E-value=1.6e-14 Score=152.05 Aligned_cols=61 Identities=18% Similarity=0.081 Sum_probs=45.6
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.|.+++ ++.|++|+++++|++|+.+ +++ ++|++. +| +|+|+ .||+|+|+ |+..|+...|+.
T Consensus 159 ~l~~~a-~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~--~g---~i~a~-~VV~A~G~-~s~~l~~~~g~~ 219 (381)
T 3nyc_A 159 GYLRGI-RRNQGQVLCNHEALEIRRV-DGA-WEVRCD--AG---SYRAA-VLVNAAGA-WCDAIAGLAGVR 219 (381)
T ss_dssp HHHHHH-HHTTCEEESSCCCCEEEEE-TTE-EEEECS--SE---EEEES-EEEECCGG-GHHHHHHHHTCC
T ss_pred HHHHHH-HHCCCEEEcCCEEEEEEEe-CCe-EEEEeC--CC---EEEcC-EEEECCCh-hHHHHHHHhCCC
Confidence 344444 4789999999999999987 554 445432 23 78998 59999997 788888888875
No 15
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.55 E-value=6.8e-14 Score=148.40 Aligned_cols=62 Identities=21% Similarity=0.244 Sum_probs=47.8
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.|.+.+ ++.|++|+++++|++|+.+ ++++.||++.+ | +++|+ .||+|+|+ ++..++...|+.
T Consensus 154 ~l~~~~-~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~--g---~i~a~-~VV~A~G~-~s~~l~~~~g~~ 215 (382)
T 1y56_B 154 AFAVKA-KEYGAKLLEYTEVKGFLIE-NNEIKGVKTNK--G---IIKTG-IVVNATNA-WANLINAMAGIK 215 (382)
T ss_dssp HHHHHH-HHTTCEEECSCCEEEEEES-SSBEEEEEETT--E---EEECS-EEEECCGG-GHHHHHHHHTCC
T ss_pred HHHHHH-HHCCCEEECCceEEEEEEE-CCEEEEEEECC--c---EEECC-EEEECcch-hHHHHHHHcCCC
Confidence 344444 4789999999999999988 77888887532 3 69998 59999997 577777777764
No 16
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.54 E-value=1e-13 Score=147.73 Aligned_cols=62 Identities=21% Similarity=0.327 Sum_probs=47.5
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.|.+.+ ++.|++|+++++|++|+.+ ++++++|++.+ | +++|+ .||+|+|+ ++..++...|+.
T Consensus 179 ~l~~~~-~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~--g---~~~a~-~vV~a~G~-~s~~l~~~~g~~ 240 (405)
T 2gag_B 179 AFARKA-NEMGVDIIQNCEVTGFIKD-GEKVTGVKTTR--G---TIHAG-KVALAGAG-HSSVLAEMAGFE 240 (405)
T ss_dssp HHHHHH-HHTTCEEECSCCEEEEEES-SSBEEEEEETT--C---CEEEE-EEEECCGG-GHHHHHHHHTCC
T ss_pred HHHHHH-HHCCCEEEcCCeEEEEEEe-CCEEEEEEeCC--c---eEECC-EEEECCch-hHHHHHHHcCCC
Confidence 344444 4789999999999999988 77788877533 4 58897 59999997 566777777764
No 17
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.49 E-value=2.3e-13 Score=154.32 Aligned_cols=61 Identities=20% Similarity=0.255 Sum_probs=49.3
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccC-CcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHH
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 701 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~g-GrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~ 701 (720)
..|.+.+ ++.|++|+++++|++|+.+ + ++|+||++.+.+|+..+|+|+ .||+|+|++....
T Consensus 254 ~~L~~~~-~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~A~-~VVlAtGg~s~~~ 315 (566)
T 1qo8_A 254 DTLRKAA-KEQGIDTRLNSRVVKLVVN-DDHSVVGAVVHGKHTGYYMIGAK-SVVLATGGYGMNK 315 (566)
T ss_dssp HHHHHHH-HHTTCCEECSEEEEEEEEC-TTSBEEEEEEEETTTEEEEEEEE-EEEECCCCCTTCH
T ss_pred HHHHHHH-HhcCCEEEeCCEEEEEEEC-CCCcEEEEEEEeCCCcEEEEEcC-EEEEecCCcccCH
Confidence 4444444 4779999999999999998 6 899999998656766789996 6999999987643
No 18
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.49 E-value=1.5e-13 Score=149.13 Aligned_cols=58 Identities=24% Similarity=0.308 Sum_probs=45.0
Q ss_pred HHHHHHhcCCCeEEEcCe---EEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHH
Q psy14408 639 YLTPIAGKRTNLYVLKRS---KVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 704 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt---~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl 704 (720)
.|.+++ ++.|++|++++ +|++|+.+ +++++||++.+ |+ +|+|+ .||+|+|+ ++..|+.
T Consensus 166 ~L~~~a-~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~--G~--~i~Ad-~VV~AtG~-~s~~l~~ 226 (438)
T 3dje_A 166 AAAREA-QRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTAD--GK--IWRAE-RTFLCAGA-SAGQFLD 226 (438)
T ss_dssp HHHHHH-HHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETT--TE--EEECS-EEEECCGG-GGGGTSC
T ss_pred HHHHHH-HhcCCEEEeCCcCceEEEEEec-CCeEEEEEECC--CC--EEECC-EEEECCCC-ChhhhcC
Confidence 444444 47899999999 99999998 88888888754 53 78998 59999998 4656543
No 19
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.49 E-value=5.1e-13 Score=151.52 Aligned_cols=61 Identities=20% Similarity=0.215 Sum_probs=49.0
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccC-CcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHH
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 701 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~g-GrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~ 701 (720)
..|.+.+ ++.|++|+++++|++|+.+ + ++|+||++.+.+|+..+|+|+ .||+|+|++....
T Consensus 259 ~~L~~~~-~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~a~-~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 259 QVLYDNA-VKRNIDLRMNTRGIEVLKD-DKGTVKGILVKGMYKGYYWVKAD-AVILATGGFAKNN 320 (571)
T ss_dssp HHHHHHH-HHTTCEEESSEEEEEEEEC-TTSCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCH
T ss_pred HHHHHHH-HhcCCEEEeCCEeeEeEEc-CCCeEEEEEEEeCCCcEEEEECC-eEEEeCCCcccCH
Confidence 4444444 4789999999999999998 5 899999998656766789997 5999999986533
No 20
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.46 E-value=8.2e-13 Score=141.26 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=33.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
++||||||||++|+++|++|+++ |++|+||||+..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCC
Confidence 58999999999999999999999 999999999854
No 21
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.45 E-value=8.1e-13 Score=139.94 Aligned_cols=36 Identities=33% Similarity=0.553 Sum_probs=33.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
++||||||||++|+++|++|+++ |++|+||||+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 57999999999999999999999 9999999998543
No 22
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.45 E-value=2.1e-13 Score=148.63 Aligned_cols=35 Identities=37% Similarity=0.463 Sum_probs=32.8
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCC-CcEEEEccC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAG 466 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G-~KVLVLEKG 466 (720)
|.++||||||||++|+++|++|+++ | ++|+||||+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~ 56 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAG 56 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccC
Confidence 4578999999999999999999999 9 999999994
No 23
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.44 E-value=2.6e-13 Score=149.47 Aligned_cols=61 Identities=16% Similarity=0.148 Sum_probs=42.4
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHH
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLL 705 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~ 705 (720)
..|.+.+ ++.|++|+++++|++|+++ +++++||++.+ |+ ++.|+ .||++++...+...|+.
T Consensus 225 ~aL~~~~-~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~--g~--~~~ad-~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 225 QGMIKLF-QDLGGEVVLNARVSHMETT-GNKIEAVHLED--GR--RFLTQ-AVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--SC--EEECS-CEEECCC----------
T ss_pred HHHHHHH-HHhCCceeeecceeEEEee-CCeEEEEEecC--Cc--EEEcC-EEEECCCHHHHHHHhcc
Confidence 3444444 4889999999999999999 99999999876 64 68998 49999998777655543
No 24
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.44 E-value=7.8e-13 Score=150.34 Aligned_cols=67 Identities=19% Similarity=0.135 Sum_probs=55.3
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.++..+. +.|++|+++++|++|+.+ +++++||++.+. +|+..+|+|+ .||+|+|+ |+..++...|+.
T Consensus 175 ~L~~~a~--~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 175 EIMKEAV--ARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAK-KVVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HHHHHHH--HTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEE-EEEECCGG-GHHHHHHTTTCC
T ss_pred HHHHHHH--HcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECC-EEEECCCc-chHHHHHhcCCC
Confidence 3444444 789999999999999998 889999999874 5666789997 59999996 788888888876
No 25
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.43 E-value=9.8e-13 Score=149.83 Aligned_cols=67 Identities=18% Similarity=0.210 Sum_probs=53.3
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.++..+. +.|++|+++++|++|+.+ +++++||++.+. +|+..+|+|+ .||+|+|+ |+..++...|+.
T Consensus 193 ~l~~~a~--~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~-ws~~l~~~~g~~ 260 (571)
T 2rgh_A 193 DNIKKAA--EDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAK-LVINTSGP-WVDKVRNLNFTR 260 (571)
T ss_dssp HHHHHHH--HTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBS-CEEECCGG-GHHHHHTTCCSS
T ss_pred HHHHHHH--HcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcC-EEEECCCh-hHHHHHHhhccC
Confidence 4455554 789999999999999998 788999998864 4555689997 59999997 688887766653
No 26
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.42 E-value=1.8e-12 Score=153.29 Aligned_cols=62 Identities=21% Similarity=0.244 Sum_probs=47.6
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.|.+.+ ++.|++|+++++|++|+.+ ++++++|++.+ | +|+|+ .||+|+|+ ++..++...|+.
T Consensus 156 ~L~~~a-~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~--G---~i~Ad-~VV~AaG~-~s~~l~~~~g~~ 217 (830)
T 1pj5_A 156 LLIKRT-ESAGVTYRGSTTVTGIEQS-GGRVTGVQTAD--G---VIPAD-IVVSCAGF-WGAKIGAMIGMA 217 (830)
T ss_dssp HHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--E---EEECS-EEEECCGG-GHHHHHHTTTCC
T ss_pred HHHHHH-HHcCCEEECCceEEEEEEe-CCEEEEEEECC--c---EEECC-EEEECCcc-chHHHHHHhCCC
Confidence 344444 3789999999999999987 77777876533 3 69998 59999997 677887777753
No 27
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.40 E-value=5.1e-12 Score=146.66 Aligned_cols=50 Identities=12% Similarity=0.264 Sum_probs=43.9
Q ss_pred CCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcc
Q psy14408 647 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIA 698 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~ 698 (720)
+.|++|++++.|++|+.+ +|+|.||.+.++ +|+...|+|+ .||+|+|++.
T Consensus 170 ~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~ 220 (660)
T 2bs2_A 170 KLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAK-GTLIATGGYG 220 (660)
T ss_dssp HHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECS-EEEECCCCCG
T ss_pred hCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcC-EEEEccCcch
Confidence 679999999999999988 889999998764 5766789997 6999999986
No 28
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.40 E-value=6.9e-12 Score=144.65 Aligned_cols=58 Identities=14% Similarity=0.180 Sum_probs=47.6
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEe-cCCcEEEEEcCcEEEEccCCcch
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGAIAN 699 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~d-t~G~e~tIkAkK~VVVAAGa~~S 699 (720)
.|...+ ++.|++|++++.|++|+.+ +|+|.||.+.+ .+|+...|+|+ .||+|+|++..
T Consensus 160 ~L~~~~-~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 160 TLYGRS-LRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHHHHH-TTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHHH-HhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 344444 4789999999999999998 88999999886 36777789996 69999999763
No 29
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.40 E-value=7e-12 Score=143.43 Aligned_cols=58 Identities=16% Similarity=0.219 Sum_probs=45.9
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcc
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIA 698 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~ 698 (720)
.|.+.+ ++.|++|++++.|++|+.+++++|.||.+.+. +|+..+|+|+ .||+|+|++.
T Consensus 148 ~L~~~~-~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~ 206 (588)
T 2wdq_A 148 TLYQQN-LKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKAR-ATVLATGGAG 206 (588)
T ss_dssp HHHHHH-HHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EEEECCCCCG
T ss_pred HHHHHH-HhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcC-EEEECCCCCc
Confidence 343443 36799999999999999853678999998863 5766789996 6999999965
No 30
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.38 E-value=3.3e-12 Score=134.71 Aligned_cols=36 Identities=25% Similarity=0.452 Sum_probs=33.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
++||||||||++|+++|++|+++ |++|+||||+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 57999999999999999999999 9999999998543
No 31
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.37 E-value=1.8e-11 Score=139.27 Aligned_cols=64 Identities=19% Similarity=0.200 Sum_probs=49.6
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccC-CcEEEEEEEecCCcEEEEEcCcEEEEccCCcch-HHHHH
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAGAIAN-AQLLL 704 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~g-GrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~S-p~LLl 704 (720)
..|.+.+ ++.|++|+++++|++|+.+ + ++|+||++.+.+|+..+|+|+ .||+|+|++.. ..++.
T Consensus 259 ~~L~~~~-~~~gv~i~~~t~v~~l~~~-~~g~v~GV~~~~~~G~~~~i~A~-~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 259 QVLWDNA-VKRGTDIRLNSRVVRILED-ASGKVTGVLVKGEYTGYYVIKAD-AVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHH-HHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHHH
T ss_pred HHHHHHH-HHcCCeEEecCEEEEEEEC-CCCeEEEEEEEeCCCcEEEEEcC-EEEEeCCCCccCHHHHH
Confidence 3444444 4779999999999999988 6 899999998656766789996 69999999864 34443
No 32
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.34 E-value=1.3e-12 Score=138.20 Aligned_cols=62 Identities=18% Similarity=0.188 Sum_probs=45.0
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
..|.+.+ ++.|++|+++++|++|+.+ ++++ +|++. +| +++|+ .||+|+|+ ++..++...|+.
T Consensus 168 ~~l~~~~-~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~--~g---~~~a~-~vV~A~G~-~s~~l~~~~~~~ 229 (382)
T 1ryi_A 168 KAYVKAA-KMLGAEIFEHTPVLHVERD-GEAL-FIKTP--SG---DVWAN-HVVVASGV-WSGMFFKQLGLN 229 (382)
T ss_dssp HHHHHHH-HHTTCEEETTCCCCEEECS-SSSE-EEEET--TE---EEEEE-EEEECCGG-GTHHHHHHTTCC
T ss_pred HHHHHHH-HHCCCEEEcCCcEEEEEEE-CCEE-EEEcC--Cc---eEEcC-EEEECCCh-hHHHHHHhcCCC
Confidence 3444444 3679999999999999887 6665 55542 23 68897 59999997 577777777653
No 33
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.34 E-value=2e-12 Score=149.53 Aligned_cols=36 Identities=22% Similarity=0.195 Sum_probs=33.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.+||||||||++|++||++|+++ |++|+||||+...
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR-GWQVTLYCADEAP 307 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 48999999999999999999999 9999999997543
No 34
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.33 E-value=1.8e-11 Score=136.61 Aligned_cols=62 Identities=19% Similarity=0.078 Sum_probs=48.1
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHH
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLL 705 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~ 705 (720)
.++..+. +.|++|+++++|++|+.+ + +++||++.+. +|+..+|+|+ .||+|+|+ |+..++..
T Consensus 154 ~l~~~a~--~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~-~s~~l~~~ 216 (501)
T 2qcu_A 154 ANAQMVV--RKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQAR-GLVNATGP-WVKQFFDD 216 (501)
T ss_dssp HHHHHHH--HTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEES-CEEECCGG-GHHHHHHH
T ss_pred HHHHHHH--HcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECC-EEEECCCh-hHHHHHHH
Confidence 3444444 789999999999999987 4 6788988763 5666789997 59999997 67777663
No 35
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.32 E-value=8.5e-12 Score=137.23 Aligned_cols=64 Identities=16% Similarity=0.154 Sum_probs=48.9
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcch---------HHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN---------AQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~S---------p~LLl~SGIg 709 (720)
.|.+.+ ++.|++|+++++|++|+.+ ++++.+|++.+ |. +|+|+ .||+|+|++.. -.++.+.|+.
T Consensus 139 ~L~~~~-~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~--G~--~i~Ad-~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 139 ALLTRL-KDLGVKIRTNTPVETIEYE-NGQTKAVILQT--GE--VLETN-HVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp HHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--CC--EEECS-CEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred HHHHHH-HHCCCEEEeCcEEEEEEec-CCcEEEEEECC--CC--EEECC-EEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 344444 3689999999999999987 77888887654 53 68997 59999998652 3677888875
No 36
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.32 E-value=3.1e-11 Score=139.42 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=46.1
Q ss_pred HHHHHHHhcCC-Ce-EEEcCeEEEEEEEccCC---cEEEEEEEec-CCcEEEEEcCcEEEEccCCcch
Q psy14408 638 AYLTPIAGKRT-NL-YVLKRSKVTKVIINDQN---VATGVEYVNS-KGETVRVTANKEVILTAGAIAN 699 (720)
Q Consensus 638 a~L~~Aa~e~a-GV-kIi~gt~VtkIl~e~gG---rAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~S 699 (720)
..|..++ ++. |+ +|++++.|++|+.+ ++ +|+||.+.+. +|+...|+|+ .||+|+|++..
T Consensus 155 ~~l~~~~-~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGG~~~ 219 (643)
T 1jnr_A 155 PIIAEAA-KMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSVREPKFYVFKAK-AVILATGGATL 219 (643)
T ss_dssp HHHHHHH-HHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred HHHHHHH-HhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEecCCcEEEEEcC-EEEECCCcccc
Confidence 3444444 355 99 99999999999997 55 9999998653 5666689996 69999999764
No 37
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.30 E-value=7.2e-11 Score=135.52 Aligned_cols=58 Identities=17% Similarity=0.314 Sum_probs=46.3
Q ss_pred HHHHHHhcCCC-eEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcch
Q psy14408 639 YLTPIAGKRTN-LYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 699 (720)
Q Consensus 639 ~L~~Aa~e~aG-VkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~S 699 (720)
.|...+ ++.| ++|++++.|++|+.+ +++|.||.+.+. +|+..+|+|+ .||+|+|++..
T Consensus 139 ~L~~~~-~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~ 198 (602)
T 1kf6_A 139 TLFQTS-LQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGR 198 (602)
T ss_dssp HHHHHH-TTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECS-CEEECCCCCGG
T ss_pred HHHHHH-HhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCCcc
Confidence 344444 3667 999999999999998 889999988763 5766689997 59999999654
No 38
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.30 E-value=2.6e-11 Score=140.87 Aligned_cols=48 Identities=19% Similarity=0.299 Sum_probs=41.8
Q ss_pred CeEEEcCeEEEEEEEccCC---cEEEEEEEec-CCcEEEEEcCcEEEEccCCcc
Q psy14408 649 NLYVLKRSKVTKVIINDQN---VATGVEYVNS-KGETVRVTANKEVILTAGAIA 698 (720)
Q Consensus 649 GVkIi~gt~VtkIl~e~gG---rAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~ 698 (720)
|++|++++.|++|+.+ ++ +|.||.+.+. +|+...|+|+ .||+|+|++.
T Consensus 182 gV~i~~~~~v~dLi~~-~~~~g~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLD-KNTPNRIAGAVGFNLRANEVHIFKAN-AMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEEC-SSSTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBC
T ss_pred CcEEEEceEEEEEEEe-CCccceEEEEEEEEcCCCcEEEEEeC-EEEECCCccc
Confidence 9999999999999998 55 9999988764 5777789997 6999999976
No 39
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.30 E-value=5e-12 Score=146.69 Aligned_cols=37 Identities=27% Similarity=0.319 Sum_probs=33.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.++||||||||++|+++|++|+++ |++|+||||+...
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQP 299 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSST
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCcc
Confidence 358999999999999999999999 9999999997543
No 40
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.29 E-value=1.6e-11 Score=128.79 Aligned_cols=69 Identities=23% Similarity=0.269 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 635 AADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 635 aa~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
....+|...+ ++.|++++.+++|+.++.+ ++++++|.... +|+..+++|+ -||.|.| .++. +-...|+.
T Consensus 103 ~~~~~L~~~a-~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~-~~~~~~~~a~-~vIgAdG-~~S~-vr~~~g~~ 171 (397)
T 3oz2_A 103 KFDKHLAALA-AKAGADVWVKSPALGVIKE-NGKVAGAKIRH-NNEIVDVRAK-MVIAADG-FESE-FGRWAGLK 171 (397)
T ss_dssp HHHHHHHHHH-HHHTCEEESSCCEEEEEEE-TTEEEEEEEEE-TTEEEEEEEE-EEEECCC-TTCH-HHHHHTCG
T ss_pred HHHHHHHHHH-HhcCcEEeeeeeeeeeeec-cceeeeeeecc-cccceEEEEe-EEEeCCc-cccH-HHHHcCCC
Confidence 3445565555 4789999999999999998 88888888765 5666789995 3555555 4553 33444554
No 41
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.28 E-value=1.4e-11 Score=139.53 Aligned_cols=51 Identities=25% Similarity=0.377 Sum_probs=42.3
Q ss_pred CCCeEEEcCeEEEEEEEccCC------cEEEEEEEec-CCcEEEEEcCcEEEEccCCcc
Q psy14408 647 RTNLYVLKRSKVTKVIINDQN------VATGVEYVNS-KGETVRVTANKEVILTAGAIA 698 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gG------rAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~ 698 (720)
..|++|++++.|++|+.++++ +|.||.+.+. +|+..+|+|+ .||+|+|++.
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~ 208 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAK-AVVLATGGAS 208 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECS-EEEECCCCCG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCcc
Confidence 379999999999999984245 8999999863 5766789997 6999999865
No 42
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Probab=99.26 E-value=4.7e-13 Score=167.44 Aligned_cols=19 Identities=47% Similarity=0.761 Sum_probs=0.0
Q ss_pred CCCCCcccccccccCCCCC
Q psy14408 159 NPDSPYYNQYQFLYSPLSP 177 (720)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~ 177 (720)
+|+||.|..-..-|||+||
T Consensus 1634 sptsp~ysp~sp~~sp~sp 1652 (1733)
T 1twf_A 1634 SPTSPSYSPTSPSYSPTSP 1652 (1733)
T ss_dssp -------------------
T ss_pred CCCCCCCCCCCCCCCCCCC
Confidence 4445554444444444444
No 43
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.25 E-value=9.5e-12 Score=133.77 Aligned_cols=59 Identities=22% Similarity=0.215 Sum_probs=45.4
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHH
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 704 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl 704 (720)
..|.+.+ ++.|++|+++++|++|+.+ +++++||++ +|+ +++|+ .||+|+|+..+..||.
T Consensus 200 ~~l~~~~-~~~G~~i~~~~~V~~i~~~-~~~~~gv~~---~g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 200 DALETVI-SANGGKIHTGQEVSKILIE-NGKAAGIIA---DDR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEE---TTE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHHHHHH-HHcCCEEEECCceeEEEEE-CCEEEEEEE---CCE--EEECC-EEEECCCHHHHHHhcC
Confidence 3344444 4789999999999999998 888888875 243 78997 5999999876666543
No 44
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.24 E-value=6.4e-11 Score=125.47 Aligned_cols=69 Identities=23% Similarity=0.265 Sum_probs=51.3
Q ss_pred HHHHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCC
Q psy14408 636 ADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 710 (720)
Q Consensus 636 a~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgp 710 (720)
...+|.+.+ ++.|++|+.+++|++|+.+ +++++||++.+ .++..+|+|+ .||.|+|. ++ .+....|+..
T Consensus 104 l~~~L~~~~-~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~-~~~~~~~~a~-~vV~A~G~-~s-~~~~~~g~~~ 172 (397)
T 3cgv_A 104 FDKHLAALA-AKAGADVWVKSPALGVIKE-NGKVAGAKIRH-NNEIVDVRAK-MVIAADGF-ES-EFGRWAGLKS 172 (397)
T ss_dssp HHHHHHHHH-HHHTCEEESSCCEEEEEEE-TTEEEEEEEEE-TTEEEEEEEE-EEEECCCT-TC-HHHHHHTCCT
T ss_pred HHHHHHHHH-HhCCCEEEECCEEEEEEEe-CCEEEEEEEEE-CCeEEEEEcC-EEEECCCc-ch-HhHHhcCCCc
Confidence 334555555 4679999999999999998 88899998876 3444689997 58888886 45 5555666655
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.18 E-value=7.1e-11 Score=129.77 Aligned_cols=37 Identities=30% Similarity=0.443 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.++||||||||++|++||+.|+++ |++|+||||+...
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~~ 62 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARAP 62 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCC
Confidence 468999999999999999999999 9999999998543
No 46
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.17 E-value=5.6e-10 Score=115.54 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=47.5
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-------C---CcEEEEEcCcEEEEccCC-----cchHHHH
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-------K---GETVRVTANKEVILTAGA-----IANAQLL 703 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-------~---G~e~tIkAkK~VVVAAGa-----~~Sp~LL 703 (720)
++..+. ++.|++|+++++|++|..+ ++++.||++.+. + |+..+++|+ .||+|+|+ .+...++
T Consensus 125 l~~~~~-~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad-~VV~AtG~~s~~~~~~~~~~ 201 (284)
T 1rp0_A 125 IMSKLL-ARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAK-IVVSSCGHDGPFGATGVKRL 201 (284)
T ss_dssp HHHHHH-TSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEE-EEEECCCSSSTTTTHHHHHH
T ss_pred HHHHHH-hcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECC-EEEECCCCchHHHHHHHHHh
Confidence 334444 3579999999999999988 788999988631 1 334689997 59999995 3445555
Q ss_pred HHcC
Q psy14408 704 LLSG 707 (720)
Q Consensus 704 l~SG 707 (720)
...|
T Consensus 202 ~~~g 205 (284)
T 1rp0_A 202 KSIG 205 (284)
T ss_dssp HHTT
T ss_pred hhcc
Confidence 4444
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.17 E-value=2.2e-10 Score=130.43 Aligned_cols=65 Identities=20% Similarity=0.284 Sum_probs=49.1
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchH--HHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANA--QLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp--~LLl~SGIg 709 (720)
..|.+.+ ++.|++|+++++|++|+.+ ++++.||++.+ |+ +++|+. ||+|+|+.... .+|...|+.
T Consensus 224 ~~L~~~l-~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~--G~--~i~Ad~-VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 224 EKMRATI-IELGGEIRFSTRVDDLHME-DGQITGVTLSN--GE--EIKSRH-VVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp HHHHHHH-HHTTCEEESSCCEEEEEES-SSBEEEEEETT--SC--EEECSC-EEECCCTTCHHHHHHHHHTTCC
T ss_pred HHHHHHH-HhcCCEEEeCCEEEEEEEe-CCEEEEEEECC--CC--EEECCE-EEECCCCChhhHHHHHHHcCCC
Confidence 3444444 4679999999999999988 78888888754 54 689984 99999986532 356666765
No 48
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.13 E-value=5.3e-10 Score=124.37 Aligned_cols=53 Identities=13% Similarity=0.283 Sum_probs=40.4
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcc
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 698 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~ 698 (720)
.|.+.+ ++.|++|++++.| +|+.+ ++++.||.+.+.+| ++.|+ .||+|+|++.
T Consensus 124 ~L~~~~-~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g---~~~a~-~VVlAtGg~~ 176 (472)
T 2e5v_A 124 FLLKLA-REEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGL---VEDVD-KLVLATGGYS 176 (472)
T ss_dssp HHHHHH-HHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEE---ECCCS-EEEECCCCCG
T ss_pred HHHHHH-HhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCC---eEEee-eEEECCCCCc
Confidence 344444 4679999999999 99988 78999998764223 46786 6999999864
No 49
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.13 E-value=3.7e-10 Score=121.17 Aligned_cols=68 Identities=18% Similarity=0.148 Sum_probs=46.5
Q ss_pred HHHHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 636 ADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 636 a~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
...+|.+.+ ++.|++|+.+++|++|+.+ ++.+. |.+.+.+|+..+++|+ .||+|+|. ++ .+....|+.
T Consensus 108 ~~~~L~~~a-~~~gv~i~~~~~v~~i~~~-~~~~~-v~v~~~~g~~~~~~a~-~vV~A~G~-~s-~l~~~~g~~ 175 (421)
T 3nix_A 108 FDKTLADEA-ARQGVDVEYEVGVTDIKFF-GTDSV-TTIEDINGNKREIEAR-FIIDASGY-GR-VIPRMFGLD 175 (421)
T ss_dssp HHHHHHHHH-HHHTCEEECSEEEEEEEEE-TTEEE-EEEEETTSCEEEEEEE-EEEECCGG-GC-HHHHHTTCE
T ss_pred HHHHHHHHH-HhCCCEEEcCCEEEEEEEe-CCEEE-EEEEcCCCCEEEEEcC-EEEECCCC-ch-hhHHhcCCC
Confidence 334555554 3669999999999999987 44332 4454446776789997 59999986 44 444555554
No 50
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.12 E-value=6.2e-10 Score=120.24 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=34.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
||||||||++||+||++|+++ |++|+||||+...++.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~ 38 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMIGGR 38 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCce
Confidence 899999999999999999999 9999999998776544
No 51
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.11 E-value=5e-10 Score=125.22 Aligned_cols=59 Identities=25% Similarity=0.346 Sum_probs=47.8
Q ss_pred HHHHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCc
Q psy14408 636 ADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 697 (720)
Q Consensus 636 a~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~ 697 (720)
...+|.+.+ ++.|++|+.+++|++|+.+ ++++.||++.+.+|...+|+|+ .||+|+|..
T Consensus 113 l~~~L~~~a-~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad-~VI~AdG~~ 171 (512)
T 3e1t_A 113 FDDMLLRNS-ERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHAR-FIVDASGNR 171 (512)
T ss_dssp HHHHHHHHH-HHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEE-EEEECCCTT
T ss_pred HHHHHHHHH-HhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcC-EEEECCCcc
Confidence 344555555 4689999999999999998 8899999988766766789997 599999974
No 52
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.08 E-value=3.4e-10 Score=126.81 Aligned_cols=41 Identities=27% Similarity=0.513 Sum_probs=37.0
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
+.++||||||+|++|+++|+.||++ |++|+||||+...++.
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYGGE 58 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCCCC
Confidence 3568999999999999999999999 9999999999877544
No 53
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.07 E-value=2.8e-10 Score=123.10 Aligned_cols=37 Identities=35% Similarity=0.642 Sum_probs=33.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhc-CCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea-~G~KVLVLEKG~~ 468 (720)
.++||||||||++|+++|++|+++ +|++|+||||+..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 458999999999999999999986 3899999999843
No 54
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.06 E-value=5.2e-10 Score=122.02 Aligned_cols=36 Identities=31% Similarity=0.463 Sum_probs=33.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.++||||||||++|++||++|+++ |++|+||||+..
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~ 38 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKK 38 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 368999999999999999999999 999999999854
No 55
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.06 E-value=1.4e-09 Score=124.77 Aligned_cols=68 Identities=22% Similarity=0.225 Sum_probs=50.1
Q ss_pred HHHHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 636 ADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 636 a~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
...+|.+.+ ++.|++|+++++|++|..+ ++++.+|++.+ +|+..+|+|+ .||.|+|. ++ .+....|+.
T Consensus 130 l~~~L~~~a-~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~-~G~~~~i~Ad-lVV~AdG~-~S-~lr~~lg~~ 197 (591)
T 3i3l_A 130 FDKLLLDEA-RSRGITVHEETPVTDVDLS-DPDRVVLTVRR-GGESVTVESD-FVIDAGGS-GG-PISRKLGVR 197 (591)
T ss_dssp HHHHHHHHH-HHTTCEEETTCCEEEEECC-STTCEEEEEEE-TTEEEEEEES-EEEECCGG-GC-HHHHHHTCE
T ss_pred HHHHHHHHH-HhCCCEEEeCCEEEEEEEc-CCCEEEEEEec-CCceEEEEcC-EEEECCCC-cc-hhHHHcCCC
Confidence 345565555 4689999999999999987 67778888875 4666789997 59999986 44 344445554
No 56
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.04 E-value=3.1e-10 Score=125.13 Aligned_cols=40 Identities=28% Similarity=0.415 Sum_probs=36.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
.++||||||||++||+||.+|+++ |++|+||||+...++.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCcc
Confidence 468999999999999999999999 9999999999877655
No 57
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.01 E-value=5.4e-09 Score=112.66 Aligned_cols=37 Identities=38% Similarity=0.530 Sum_probs=33.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhc-CCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea-~G~KVLVLEKG~~ 468 (720)
.++||||||||++||++|++|+++ .|++|+||||+..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 468999999999999999999995 5999999999843
No 58
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.00 E-value=1.2e-09 Score=124.75 Aligned_cols=73 Identities=12% Similarity=0.217 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEe----cCCcE-------EEEEcCcEEEEccCCcchH--H
Q psy14408 635 AADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVN----SKGET-------VRVTANKEVILTAGAIANA--Q 701 (720)
Q Consensus 635 aa~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~d----t~G~e-------~tIkAkK~VVVAAGa~~Sp--~ 701 (720)
....+|.+.+ ++.|++|+.+++|++|+.+++|+++||++.+ .+|+. .+++|+ .||+|.|+.... .
T Consensus 145 ~l~~~L~~~a-~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad-~VV~AdG~~S~vr~~ 222 (584)
T 2gmh_A 145 HLVSWMGEQA-EALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK-VTIFAEGCHGHLAKQ 222 (584)
T ss_dssp HHHHHHHHHH-HHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECS-EEEECCCTTCHHHHH
T ss_pred HHHHHHHHHH-HHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECC-EEEEeeCCCchHHHH
Confidence 4445666666 4679999999999999987347899998763 23432 479997 699999986542 3
Q ss_pred HHHHcCCC
Q psy14408 702 LLLLSGIG 709 (720)
Q Consensus 702 LLl~SGIg 709 (720)
++...|+.
T Consensus 223 l~~~~gl~ 230 (584)
T 2gmh_A 223 LYKKFDLR 230 (584)
T ss_dssp HHHHTTTT
T ss_pred HHHHhCCC
Confidence 44445654
No 59
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.00 E-value=1.6e-09 Score=118.83 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=45.6
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcc
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIA 698 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~ 698 (720)
.+|.+.+ ++.|++|+.+++|++|..+ +++++||++.+. +|+..+++|+ .||.|+|+..
T Consensus 104 ~~L~~~a-~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad-~VV~AdG~~s 162 (453)
T 3atr_A 104 QRVLKEA-QDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSK-VVVEATGYSR 162 (453)
T ss_dssp HHHHHHH-HHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECS-EEEECCGGGC
T ss_pred HHHHHHH-HHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcC-EEEECcCCch
Confidence 4455544 3689999999999999988 788999988754 5666689997 5999999743
No 60
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.96 E-value=1.1e-08 Score=114.73 Aligned_cols=36 Identities=28% Similarity=0.416 Sum_probs=33.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.++||||||||++||++|+.|+++ |++|+||||...
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 468999999999999999999999 999999999853
No 61
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.95 E-value=7.8e-09 Score=112.01 Aligned_cols=66 Identities=15% Similarity=0.222 Sum_probs=53.4
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 710 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgp 710 (720)
.++.+.+ ++.|++|++++.|++|..+ ++++.+|++.+ |+ ++.|+ .||+|+|......+|..+|+.-
T Consensus 198 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~d--G~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~~ 263 (415)
T 3lxd_A 198 EFYQAEH-RAHGVDLRTGAAMDCIEGD-GTKVTGVRMQD--GS--VIPAD-IVIVGIGIVPCVGALISAGASG 263 (415)
T ss_dssp HHHHHHH-HHTTCEEEETCCEEEEEES-SSBEEEEEESS--SC--EEECS-EEEECSCCEESCHHHHHTTCCC
T ss_pred HHHHHHH-HhCCCEEEECCEEEEEEec-CCcEEEEEeCC--CC--EEEcC-EEEECCCCccChHHHHhCCCCc
Confidence 4455555 5789999999999999987 78888888765 64 68898 5999999887777888888763
No 62
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.93 E-value=5.8e-09 Score=118.94 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=31.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
+++||||||||++||++|+.|+++ |++|+||||...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCC
Confidence 468999999999999999999999 999999999843
No 63
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.93 E-value=2.3e-09 Score=117.76 Aligned_cols=42 Identities=17% Similarity=0.336 Sum_probs=37.5
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
++.+||||||||++||+||++|+++.|++|+||||..+.++.
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 456899999999999999999998449999999999888764
No 64
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.92 E-value=1.6e-09 Score=111.70 Aligned_cols=67 Identities=9% Similarity=0.142 Sum_probs=49.8
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
++..+. ++.|++|+.++.|++|..+ ++++.+|++.+. +|+..++.++ .||+|+|......++.. |+.
T Consensus 214 ~~~~l~-~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~~~-~l~ 281 (338)
T 3itj_A 214 MQKRAE-KNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIVAG-QVD 281 (338)
T ss_dssp HHHHHH-HCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGGBT-TBC
T ss_pred HHHHHH-hcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHhhC-ceE
Confidence 444444 3459999999999999987 778899999874 4555789998 69999997655554433 543
No 65
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.92 E-value=5.7e-09 Score=111.67 Aligned_cols=35 Identities=26% Similarity=0.482 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.++||||||||++|+++|+.|+++ |++|+||||..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~ 39 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQAR 39 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 357999999999999999999999 99999999984
No 66
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.92 E-value=4.3e-09 Score=113.47 Aligned_cols=38 Identities=34% Similarity=0.487 Sum_probs=34.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
+||||||||++|++||++|+++ |++|+||||....++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERLGGR 39 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCccCe
Confidence 6999999999999999999999 9999999997666443
No 67
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.90 E-value=1.7e-08 Score=109.33 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=35.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCC------CcEEEEccCCCCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSS------LKVLLIEAGGDTPIH 472 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G------~KVLVLEKG~~~~~s 472 (720)
.+||||||||++||+||++|+++ | ++|+||||....++.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCCce
Confidence 47999999999999999999999 9 999999998766543
No 68
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.89 E-value=2.4e-08 Score=106.84 Aligned_cols=38 Identities=34% Similarity=0.401 Sum_probs=33.6
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhc-CCCcEEEEccCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGD 468 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea-~G~KVLVLEKG~~ 468 (720)
..++||||||||++|++||+.|+++ +|++|+|+||+..
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 3568999999999999999999986 3899999999853
No 69
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.87 E-value=1.3e-09 Score=103.60 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=34.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 470 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~ 470 (720)
+++||+|||||++||+||+.|+++ |++|+||||+..++
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSG 38 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCC
Confidence 358999999999999999999999 99999999987654
No 70
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.87 E-value=7.9e-09 Score=105.66 Aligned_cols=67 Identities=22% Similarity=0.288 Sum_probs=53.0
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
++..+. ++.|++|+.+++|++|..+ +++.+|++.+. +|++.++.++ .||+|+|......+|..+|+.
T Consensus 195 ~~~~~~-~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 195 YVETVK-KKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGIE 262 (323)
T ss_dssp HHHHHH-TCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTCC
T ss_pred HHHHHH-hCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCee
Confidence 455555 4569999999999999865 56778888763 5766789998 599999987777888888775
No 71
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.87 E-value=2.5e-08 Score=107.74 Aligned_cols=66 Identities=17% Similarity=0.328 Sum_probs=53.0
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 710 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgp 710 (720)
.++.+.+ ++.|++|++++.|++|..+ ++++.+|++.+ |+ ++.|+ .||+|+|......++..+|+.-
T Consensus 188 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~d--G~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~~ 253 (404)
T 3fg2_P 188 SYFHDRH-SGAGIRMHYGVRATEIAAE-GDRVTGVVLSD--GN--TLPCD-LVVVGVGVIPNVEIAAAAGLPT 253 (404)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--SC--EEECS-EEEECCCEEECCHHHHHTTCCB
T ss_pred HHHHHHH-HhCCcEEEECCEEEEEEec-CCcEEEEEeCC--CC--EEEcC-EEEECcCCccCHHHHHhCCCCC
Confidence 4455555 5789999999999999987 78888888755 64 68898 6999999877777888888763
No 72
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.86 E-value=1.9e-08 Score=100.83 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=32.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.++||||||||++|+.+|..|++. |++|+|||++
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~ 35 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQS 35 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecC
Confidence 468999999999999999999999 9999999997
No 73
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.85 E-value=5.2e-09 Score=114.78 Aligned_cols=40 Identities=23% Similarity=0.387 Sum_probs=36.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
.++||||||||++|+++|..|+++ |++|+||||+...++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGGE 44 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCcccc
Confidence 468999999999999999999999 9999999998777554
No 74
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.82 E-value=5.1e-09 Score=109.94 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=32.2
Q ss_pred ccEEEECCcHHHHHHHHHHHh---cCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAe---a~G~KVLVLEKG~~~ 469 (720)
.||||||||++|++||+.|++ + |++|+||||+...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCCC
Confidence 499999999999999999999 8 9999999998543
No 75
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.82 E-value=1.4e-08 Score=105.15 Aligned_cols=36 Identities=19% Similarity=0.450 Sum_probs=33.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
..+||||||||++|+++|+.|+++ |++|+||||+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~~ 37 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 358999999999999999999999 999999999843
No 76
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.82 E-value=8.2e-09 Score=106.99 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=33.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.+||||||||++|+++|+.|+++ |++|+||||+...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCCC
Confidence 36999999999999999999999 9999999998543
No 77
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.82 E-value=3.5e-08 Score=110.44 Aligned_cols=40 Identities=28% Similarity=0.373 Sum_probs=35.2
Q ss_pred ccCCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 428 VKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 428 I~~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
++.+.++||||||||++||++|+.|+++ |++|+||||...
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~ 45 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVE 45 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 4566789999999999999999999999 999999999843
No 78
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.82 E-value=1.6e-08 Score=116.83 Aligned_cols=52 Identities=25% Similarity=0.520 Sum_probs=40.2
Q ss_pred HHHHHHHhcC-CCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCc
Q psy14408 638 AYLTPIAGKR-TNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 697 (720)
Q Consensus 638 a~L~~Aa~e~-aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~ 697 (720)
..|.+.+ ++ .|++|+ ++.|++|+.+ ++++.||++.+ |. +++|+ .||+|+|++
T Consensus 127 ~~L~~~L-e~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~d--G~--~i~Ad-aVVLATG~~ 179 (637)
T 2zxi_A 127 EYMKKVC-ENQENLYIK-QEEVVDIIVK-NNQVVGVRTNL--GV--EYKTK-AVVVTTGTF 179 (637)
T ss_dssp HHHHHHH-HTCTTEEEE-ESCEEEEEES-SSBEEEEEETT--SC--EEECS-EEEECCTTC
T ss_pred HHHHHHH-HhCCCCEEE-EeEEEEEEec-CCEEEEEEECC--Cc--EEEeC-EEEEccCCC
Confidence 4455555 35 699995 6799999998 88899998754 63 68997 699999985
No 79
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.81 E-value=1.3e-08 Score=109.30 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=32.8
Q ss_pred ccCCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 428 VKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 428 I~~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.+....+||||||||++||++|+.|+++ |++|+||||..
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~ 56 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVK 56 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 4455678999999999999999999999 99999999984
No 80
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.81 E-value=6.7e-09 Score=113.44 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=34.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC--cEEEEccCCCCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGGDTPIH 472 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG~~~~~s 472 (720)
.||||||||++||+||++|+++ |+ +|+||||+...++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~GG~ 42 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLGGW 42 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSBTT
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCc
Confidence 5999999999999999999999 99 99999998776544
No 81
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.81 E-value=8.1e-09 Score=110.16 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
++||||||||++||++|+.|+++ |++|+||||..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 57999999999999999999999 99999999974
No 82
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.80 E-value=1.8e-10 Score=121.16 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=30.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcCC------CcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSS------LKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G------~KVLVLEKG~ 467 (720)
||||||||++||++|++|+++ | ++|+||||+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCC
Confidence 999999999999999999999 8 9999999984
No 83
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.80 E-value=1.6e-08 Score=117.12 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=32.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.++||||||||.+|++||+.||+. |++|+|||++
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~ 60 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHN 60 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeec
Confidence 468999999999999999999999 9999999997
No 84
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.78 E-value=4.1e-08 Score=107.48 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=35.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCC--CcEEEEccCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSS--LKVLLIEAGGDTPI 471 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G--~KVLVLEKG~~~~~ 471 (720)
..+||||||||++||+||++|+++ | ++|+||||....++
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERLGG 43 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSSBT
T ss_pred CcccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCCCc
Confidence 357999999999999999999999 9 99999999876644
No 85
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.78 E-value=1.1e-07 Score=106.82 Aligned_cols=69 Identities=22% Similarity=0.348 Sum_probs=50.0
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHH-HHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-LLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~-LLl~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..++++++.|+.+...+|+ .++.|+. ||+|+|...... +|...|+.
T Consensus 259 ~~l~~~l-~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~-~~i~aD~-Vv~A~G~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 259 AYVLDRM-KEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGE-MRIETDF-VFLGLGEQPRSAELAKILGLD 328 (523)
T ss_dssp HHHHHHH-HHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEE-EEEECSC-EEECCCCEECCHHHHHHHTCC
T ss_pred HHHHHHH-HhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCc-EEEEcCE-EEECcCCccCCccCHHHcCCc
Confidence 3455555 57899999999999998753456656655543452 3789984 999999876666 78887775
No 86
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.78 E-value=8.2e-09 Score=112.92 Aligned_cols=42 Identities=17% Similarity=0.285 Sum_probs=35.1
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
....+||||||||++||+||+.|+++ |++|+||||....++.
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLGGA 54 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSBTT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCce
Confidence 34467999999999999999999999 9999999998776544
No 87
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.78 E-value=2.6e-08 Score=110.40 Aligned_cols=63 Identities=21% Similarity=0.342 Sum_probs=44.3
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
.+.+.+ ++.|++|+++++|++|..+ ++++ .|++. +|+ ++.|+ .||+|+|......+ |...|+.
T Consensus 237 ~l~~~l-~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~--~g~--~i~aD-~Vi~A~G~~p~~~~l~l~~~g~~ 301 (484)
T 3o0h_A 237 LLNDAM-VAKGISIIYEATVSQVQST-ENCY-NVVLT--NGQ--TICAD-RVMLATGRVPNTTGLGLERAGVK 301 (484)
T ss_dssp HHHHHH-HHHTCEEESSCCEEEEEEC-SSSE-EEEET--TSC--EEEES-EEEECCCEEECCTTCCHHHHTCC
T ss_pred HHHHHH-HHCCCEEEeCCEEEEEEee-CCEE-EEEEC--CCc--EEEcC-EEEEeeCCCcCCCCCChhhcCce
Confidence 444444 4779999999999999887 5554 45443 353 68898 59999997655554 5666664
No 88
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.77 E-value=5.6e-08 Score=108.79 Aligned_cols=38 Identities=29% Similarity=0.382 Sum_probs=33.7
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
+..++||||||||++||++|+.|+++ |++|+||||...
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~ 46 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQ 46 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 44678999999999999999999999 999999999743
No 89
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.73 E-value=5.9e-08 Score=107.79 Aligned_cols=58 Identities=14% Similarity=0.162 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchH
Q psy14408 635 AADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANA 700 (720)
Q Consensus 635 aa~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp 700 (720)
....+|.+.+ ++.|++++.+ +|++|..++++++.+|++.+ |+ +++|+ .||.|+|. ++.
T Consensus 174 ~l~~~L~~~a-~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~--g~--~~~ad-~vV~A~G~-~S~ 231 (511)
T 2weu_A 174 EVARYLSEYA-IARGVRHVVD-DVQHVGQDERGWISGVHTKQ--HG--EISGD-LFVDCTGF-RGL 231 (511)
T ss_dssp HHHHHHHHHH-HHTTCEEEEC-CEEEEEECTTSCEEEEEESS--SC--EEECS-EEEECCGG-GCC
T ss_pred HHHHHHHHHH-HHCCCEEEEC-eEeEEEEcCCCCEEEEEECC--CC--EEEcC-EEEECCCc-chH
Confidence 3444555555 4689999999 99999985356777777644 53 68997 58888886 443
No 90
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.72 E-value=1.6e-08 Score=113.26 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=33.7
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
...+||||||||++|+++|+.|++. |++|+||||+..
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEeccc
Confidence 3467999999999999999999999 999999999843
No 91
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.72 E-value=2.5e-08 Score=101.76 Aligned_cols=63 Identities=13% Similarity=0.182 Sum_probs=49.1
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHH
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 704 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl 704 (720)
++..++ ++.|++|+.++.|++|..+ ++++.+|++...+|++.++.++ .||+|+|......++.
T Consensus 188 ~~~~~~-~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 188 TVEKVK-KNEKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVP-GIFTFVGLNVRNEILK 250 (315)
T ss_dssp HHHHHH-HCTTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCS-CEEECSCEEECCGGGB
T ss_pred HHHHHH-hcCCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecC-eEEEEEcCCCCchhhh
Confidence 444554 5789999999999999887 7788999988445776789998 5999999765555543
No 92
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.72 E-value=2.3e-08 Score=115.70 Aligned_cols=36 Identities=36% Similarity=0.617 Sum_probs=32.6
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.+.++||||||||++|+.||+.||+. |++|+|||+.
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~ 53 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSD 53 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEec
Confidence 34568999999999999999999999 9999999987
No 93
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.70 E-value=1.7e-08 Score=112.35 Aligned_cols=39 Identities=26% Similarity=0.403 Sum_probs=35.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
.+||||||||++||+||++|+++ |++|+||||....++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCc
Confidence 46999999999999999999999 9999999998777544
No 94
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.70 E-value=1e-07 Score=105.03 Aligned_cols=39 Identities=26% Similarity=0.408 Sum_probs=35.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
++||||||||++||+||++|+++ |++|+||||....++.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIGGR 77 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSBTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCCCc
Confidence 48999999999999999999999 9999999998777544
No 95
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.70 E-value=1e-08 Score=107.99 Aligned_cols=67 Identities=18% Similarity=0.180 Sum_probs=50.7
Q ss_pred HHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 640 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 640 L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
|.+.. ++.|++|+.+++|++|..+ ++++.+|++...+|++.++.++ .||+|+|......+|...|+.
T Consensus 208 l~~~~-~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~~ 274 (360)
T 3ab1_A 208 VERAR-ANGTIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEAD-RLLILIGFKSNLGPLARWDLE 274 (360)
T ss_dssp SHHHH-HHTSEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECS-EEEECCCBCCSCGGGGGSSCC
T ss_pred HHHHh-hcCceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCC-EEEECCCCCCCHHHHHhhccc
Confidence 33433 4679999999999999987 7788888887335766789998 599999965555567666654
No 96
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.69 E-value=9.3e-08 Score=107.40 Aligned_cols=35 Identities=31% Similarity=0.447 Sum_probs=32.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHh---cCCCcEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAe---a~G~KVLVLEKG~ 467 (720)
..+||||||||++|+++|+.|++ + |++|+||||..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCC
Confidence 35799999999999999999999 8 99999999964
No 97
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.69 E-value=1.7e-07 Score=104.03 Aligned_cols=68 Identities=21% Similarity=0.261 Sum_probs=47.5
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecC-CcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSK-GETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~-G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+ ++.+ .|.+.+.. |+..++.++ .||+|+|......+ |...|+.
T Consensus 243 ~~l~~~l-~~~gV~v~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~g~~ 313 (491)
T 3urh_A 243 KQLQRML-TKQGIDFKLGAKVTGAVKS-GDGA-KVTFEPVKGGEATTLDAE-VVLIATGRKPSTDGLGLAKAGVV 313 (491)
T ss_dssp HHHHHHH-HHTTCEEECSEEEEEEEEE-TTEE-EEEEEETTSCCCEEEEES-EEEECCCCEECCTTSCHHHHTCC
T ss_pred HHHHHHH-HhCCCEEEECCeEEEEEEe-CCEE-EEEEEecCCCceEEEEcC-EEEEeeCCccCCCccCchhcCce
Confidence 3444555 5789999999999999876 4443 45565432 545688998 59999997655554 5666664
No 98
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.67 E-value=4.6e-07 Score=99.85 Aligned_cols=37 Identities=35% Similarity=0.533 Sum_probs=34.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.+|||||||||.+|++||++|+++ |++|+||||+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCCcc
Confidence 468999999999999999999999 9999999998644
No 99
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.67 E-value=1.3e-07 Score=101.46 Aligned_cols=35 Identities=26% Similarity=0.261 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
..+||||||||++||++|+.|+++ |++|+||||..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCC
Confidence 457999999999999999999999 99999999984
No 100
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.67 E-value=6.8e-08 Score=102.96 Aligned_cols=36 Identities=22% Similarity=0.189 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
..+||||||||++|+++|+.|+++ |++|+||||...
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~ 45 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSE 45 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCC
Confidence 357999999999999999999999 999999999843
No 101
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.67 E-value=1.2e-07 Score=104.33 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=32.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.++||||||||++|++||++|+++ |++|+||||+
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 358999999999999999999999 9999999994
No 102
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.66 E-value=8.1e-08 Score=98.77 Aligned_cols=60 Identities=13% Similarity=0.217 Sum_probs=45.9
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-C-CcEEEEEcCcEEEEccCCcchHHHHHHcCC
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-K-GETVRVTANKEVILTAGAIANAQLLLLSGI 708 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~-G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGI 708 (720)
++.|++|+++++|++|..+ ++++.+|++.+. + |+..++.++ .||+|+|......+|. .|+
T Consensus 195 ~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~~-~~l 256 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIFE-GQL 256 (320)
T ss_dssp HTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGGT-TTS
T ss_pred ccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHhc-ccc
Confidence 4789999999999999877 668889998763 2 545689998 5999999765555443 444
No 103
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.65 E-value=1.3e-07 Score=103.50 Aligned_cols=64 Identities=22% Similarity=0.340 Sum_probs=49.3
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEE--ccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVII--NDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~--e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
++.+.+ ++.|++|++++.|++|.. + ++++.+|++.+ |+ ++.++ .||+|+|......+|..+|+.
T Consensus 196 ~l~~~l-~~~GV~i~~~~~v~~i~~~~~-~~~v~~v~~~~--G~--~i~~D-~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 196 FYEHLH-REAGVDIRTGTQVCGFEMSTD-QQKVTAVLCED--GT--RLPAD-LVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHH-HHHTCEEECSCCEEEEEECTT-TCCEEEEEETT--SC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHH-HhCCeEEEeCCEEEEEEeccC-CCcEEEEEeCC--CC--EEEcC-EEEECCCCCcCcchhhccCCC
Confidence 444444 477999999999999987 5 67777777644 63 68898 599999976666788888875
No 104
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.65 E-value=3.7e-07 Score=103.18 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=33.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.++||||||||++||++|+.|+++ |++|+||||...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 468999999999999999999999 999999999843
No 105
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.64 E-value=1.5e-07 Score=106.33 Aligned_cols=54 Identities=15% Similarity=0.200 Sum_probs=40.1
Q ss_pred HHHHHHHHHhcCC-CeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCC
Q psy14408 636 ADAYLTPIAGKRT-NLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 696 (720)
Q Consensus 636 a~a~L~~Aa~e~a-GVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa 696 (720)
...+|.+.+ ++. |++|+.+ +|++|..++++++.+|++.+ |+ +++|+ .||+|+|.
T Consensus 196 l~~~L~~~~-~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~--G~--~i~ad-~vI~A~G~ 250 (550)
T 2e4g_A 196 VADFLRRFA-TEKLGVRHVED-RVEHVQRDANGNIESVRTAT--GR--VFDAD-LFVDCSGF 250 (550)
T ss_dssp HHHHHHHHH-HHHSCCEEEEC-CEEEEEECTTSCEEEEEETT--SC--EEECS-EEEECCGG
T ss_pred HHHHHHHHH-HhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC--CC--EEECC-EEEECCCC
Confidence 445565555 456 9999999 99999886356777777644 53 68997 59999996
No 106
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.64 E-value=1.2e-07 Score=109.13 Aligned_cols=35 Identities=29% Similarity=0.518 Sum_probs=33.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHh-cCCCcEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSE-VSSLKVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAe-a~G~KVLVLEKG~ 467 (720)
.++||||||||++||++|+.|++ . |++|+||||..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~ 66 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKE 66 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 46899999999999999999999 9 99999999984
No 107
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.63 E-value=5.5e-08 Score=107.71 Aligned_cols=69 Identities=17% Similarity=0.186 Sum_probs=47.8
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHH--HHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL--LLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LL--l~SGIg 709 (720)
..+.+.+ ++.|++|++++.|++|..++++++ .|++.+. .|+..++.++ .||+|+|......+| ...|+.
T Consensus 231 ~~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l~l~~~gl~ 302 (483)
T 3dgh_A 231 ELVAASM-EERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDLNLPNAGVT 302 (483)
T ss_dssp HHHHHHH-HHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEES-EEEECSCEEECCGGGTGGGTTCC
T ss_pred HHHHHHH-HhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcC-EEEECcccccCcCcCCchhcCcc
Confidence 3455555 578999999999999987523443 4666663 3556689998 599999976555554 455554
No 108
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.62 E-value=2.8e-07 Score=99.34 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=32.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCc-EEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLK-VLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~K-VLVLEKG~~ 468 (720)
.++||||||||++||++|+.|+++ |++ |+||||...
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~ 39 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSE 39 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCC
Confidence 357999999999999999999999 999 999999843
No 109
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.62 E-value=4.9e-07 Score=98.74 Aligned_cols=37 Identities=35% Similarity=0.460 Sum_probs=33.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCC-----CcEEEEccCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSS-----LKVLLIEAGGDT 469 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G-----~KVLVLEKG~~~ 469 (720)
..+||||||||++|+++|..|+++ | ++|+||||....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCC
Confidence 468999999999999999999999 9 999999998644
No 110
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.61 E-value=1.7e-07 Score=105.18 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhcC-CCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCC
Q psy14408 635 AADAYLTPIAGKR-TNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 696 (720)
Q Consensus 635 aa~a~L~~Aa~e~-aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa 696 (720)
....+|.+.+ ++ .|++++.+ +|++|..++++.+++|++.+ |+ +++|+ .||.|+|.
T Consensus 176 ~l~~~L~~~a-~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~--g~--~i~ad-~vV~AdG~ 231 (526)
T 2pyx_A 176 KFSQLLTEHC-TQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ--NG--EISGQ-LFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHH-HHTSCCEEEEC-CEEEEEECTTSCEEEEEESS--SC--EEECS-EEEECSGG
T ss_pred HHHHHHHHHH-HhcCCCEEEEe-EEEEEEecCCCcEEEEEECC--CC--EEEcC-EEEECCCc
Confidence 3445565555 35 79999999 59999886345666776543 54 48997 59999886
No 111
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.60 E-value=2.4e-07 Score=109.46 Aligned_cols=40 Identities=30% Similarity=0.353 Sum_probs=36.0
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 471 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~ 471 (720)
...+||||||||++|++||+.|+++ |++|+||||+...++
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccceec
Confidence 3468999999999999999999999 999999999876654
No 112
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.60 E-value=2.7e-07 Score=101.70 Aligned_cols=64 Identities=22% Similarity=0.229 Sum_probs=48.2
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+ ++++. |++.+ |+ ++.++ .||+|+|......++...|+.
T Consensus 206 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~-v~~~~--g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 206 QMLRHDL-EKNDVVVHTGEKVVRLEGE-NGKVA-RVITD--KR--TLDAD-LVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEES-SSBEE-EEEES--SC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHH-HhcCCEEEeCCEEEEEEcc-CCeEE-EEEeC--CC--EEEcC-EEEECCCCCcCHHHHHhCCcc
Confidence 3455555 5789999999999999886 56655 55544 64 78898 599999987666677777875
No 113
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.58 E-value=2.1e-07 Score=108.03 Aligned_cols=38 Identities=32% Similarity=0.405 Sum_probs=34.7
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
...+||||||||++|++||++|+++ |++|+||||+...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 4567999999999999999999999 9999999998654
No 114
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.56 E-value=9.4e-08 Score=106.08 Aligned_cols=69 Identities=17% Similarity=0.188 Sum_probs=47.0
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecC-CcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSK-GETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~-G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
..+...+ ++.|++|++++.|++|...+++. ..|++.+.+ |++.++.++ .||+|+|......+ |...|+.
T Consensus 229 ~~l~~~l-~~~gv~~~~~~~v~~i~~~~~~~-~~v~~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~l~l~~~g~~ 300 (488)
T 3dgz_A 229 SLVTEHM-ESHGTQFLKGCVPSHIKKLPTNQ-LQVTWEDHASGKEDTGTFD-TVLWAIGRVPETRTLNLEKAGIS 300 (488)
T ss_dssp HHHHHHH-HHTTCEEEETEEEEEEEECTTSC-EEEEEEETTTTEEEEEEES-EEEECSCEEESCGGGTGGGGTCC
T ss_pred HHHHHHH-HHCCCEEEeCCEEEEEEEcCCCc-EEEEEEeCCCCeeEEEECC-EEEEcccCCcccCcCCccccCcE
Confidence 4455555 57899999999999998742343 346665543 555678998 59999997665555 4455553
No 115
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.55 E-value=2.2e-07 Score=95.44 Aligned_cols=34 Identities=26% Similarity=0.271 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.+||||||||++|++||+.|+++ |++|+||||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCC
Confidence 47999999999999999999999 99999999984
No 116
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.55 E-value=5.6e-07 Score=98.37 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=45.6
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.++.+.. ++.|+++++++.|++|.-+ ++.+.+.+|...+|.++ .||+++|.-. +.++..+|..
T Consensus 204 ~~l~~~l-~~~GV~~~~~~~v~~v~~~------~~~~~~~~g~~~~i~~d-~vi~~~G~~~-~~~~~~~~~~ 266 (430)
T 3hyw_A 204 RLVEDLF-AERNIDWIANVAVKAIEPD------KVIYEDLNGNTHEVPAK-FTMFMPSFQG-PEVVASAGDK 266 (430)
T ss_dssp HHHHHHH-HHTTCEEECSCEEEEECSS------EEEEECTTSCEEEEECS-EEEEECEEEC-CHHHHTTCTT
T ss_pred HHHHHHH-HhCCeEEEeCceEEEEeCC------ceEEEeeCCCceEeecc-eEEEeccCCC-chHHHhcccc
Confidence 4555555 5789999999999998532 35566656777789998 5899988644 4677777643
No 117
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.54 E-value=2.8e-07 Score=99.28 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=31.8
Q ss_pred cEEEECCcHHHHHHHHHHHh---cCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAe---a~G~KVLVLEKG~~~ 469 (720)
||||||||++|+++|.+|++ . |++|+|||++...
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~~ 39 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRFS 39 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCCc
Confidence 89999999999999999999 8 9999999998654
No 118
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.53 E-value=1.3e-06 Score=95.16 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=32.2
Q ss_pred ccEEEECCcHHHHHHHHHHHh--cCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSE--VSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAe--a~G~KVLVLEKG~~~ 469 (720)
.||||||||++|++||.+|++ . |++|+|||++...
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCC
Confidence 499999999999999999999 6 8999999998654
No 119
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.52 E-value=3.2e-07 Score=99.53 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=49.7
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 710 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgp 710 (720)
.++.+.+ ++.|++|++++.|++|..+ +++.+|++.+ |+ ++.|+ .||+|+|......+|..+|+.-
T Consensus 189 ~~l~~~l-~~~GV~i~~~~~v~~i~~~--~~~~~v~~~d--g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~~ 253 (410)
T 3ef6_A 189 AWLRGLL-TELGVQVELGTGVVGFSGE--GQLEQVMASD--GR--SFVAD-SALICVGAEPADQLARQAGLAC 253 (410)
T ss_dssp HHHHHHH-HHHTCEEECSCCEEEEECS--SSCCEEEETT--SC--EEECS-EEEECSCEEECCHHHHHTTCCB
T ss_pred HHHHHHH-HHCCCEEEeCCEEEEEecc--CcEEEEEECC--CC--EEEcC-EEEEeeCCeecHHHHHhCCCcc
Confidence 3455555 5789999999999999754 3566777654 64 68898 5999999877777888888753
No 120
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.51 E-value=5.1e-07 Score=95.40 Aligned_cols=33 Identities=30% Similarity=0.456 Sum_probs=31.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.|||||||++||++|+.|+++ |++|+||||...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 699999999999999999999 999999999743
No 121
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.49 E-value=1.4e-06 Score=97.11 Aligned_cols=67 Identities=19% Similarity=0.288 Sum_probs=46.7
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
..+.+.+ ++. ++|++++.|++|..+ ++++. |++.+.+|++.++.++ .||+|+|......+ |...|+.
T Consensus 219 ~~l~~~l-~~~-V~i~~~~~v~~i~~~-~~~v~-v~~~~~~G~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~gl~ 287 (492)
T 3ic9_A 219 RYAEKTF-NEE-FYFDAKARVISTIEK-EDAVE-VIYFDKSGQKTTESFQ-YVLAATGRKANVDKLGLENTSIE 287 (492)
T ss_dssp HHHHHHH-HTT-SEEETTCEEEEEEEC-SSSEE-EEEECTTCCEEEEEES-EEEECSCCEESCSSSCGGGSCCC
T ss_pred HHHHHHH-hhC-cEEEECCEEEEEEEc-CCEEE-EEEEeCCCceEEEECC-EEEEeeCCccCCCCCChhhcCCE
Confidence 3455555 355 999999999999887 55544 5554335766689998 59999998666555 5555654
No 122
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.48 E-value=2.1e-06 Score=95.72 Aligned_cols=64 Identities=16% Similarity=0.280 Sum_probs=47.3
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.++.+.+ ++.|++|++++.|++|..+ ++++ +|++. +|+ ++.|+ .||+|+|......++..+|+.
T Consensus 230 ~~~~~~l-~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~--dG~--~i~aD-~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 230 NWTMEKV-RREGVKVMPNAIVQSVGVS-SGKL-LIKLK--DGR--KVETD-HIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHHHHH-HTTTCEEECSCCEEEEEEE-TTEE-EEEET--TSC--EEEES-EEEECCCEEECCTTHHHHTCC
T ss_pred HHHHHHH-HhcCCEEEeCCEEEEEEec-CCeE-EEEEC--CCC--EEECC-EEEECCCCCccHHHHHHcCCc
Confidence 3455555 5889999999999999876 4443 45543 364 68898 599999987666788888875
No 123
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.47 E-value=9.8e-07 Score=96.58 Aligned_cols=37 Identities=32% Similarity=0.396 Sum_probs=33.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCC--cEEEEccCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGGDT 469 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG~~~ 469 (720)
..+||||||||++|+++|+.|+++ |+ +|+|+||....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCC
Confidence 357999999999999999999999 99 99999998654
No 124
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.45 E-value=3.7e-07 Score=103.43 Aligned_cols=36 Identities=19% Similarity=0.400 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHH-hcCCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLS-EVSSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LA-ea~G~KVLVLEKG~~ 468 (720)
.++||||||||++|+++|++|+ +. |++|+||||+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCCC
Confidence 4689999999999999999999 77 999999999843
No 125
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.44 E-value=6.7e-07 Score=101.51 Aligned_cols=37 Identities=30% Similarity=0.482 Sum_probs=33.4
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
..++||||||||++|+++|++|++. |++|+||||+..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~ 55 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAASG 55 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 3568999999999999999999998 999999999853
No 126
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.44 E-value=4.5e-07 Score=100.04 Aligned_cols=34 Identities=32% Similarity=0.595 Sum_probs=32.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
++||||||||.+|++||++|++. |++|+||||..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCC
Confidence 58999999999999999999999 99999999763
No 127
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.44 E-value=1e-07 Score=98.58 Aligned_cols=57 Identities=16% Similarity=0.186 Sum_probs=43.1
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
++.|++++.+. |+.+..+ ++++.+|++.+ |+ ++.++ .||+++|+.....+|...|+.
T Consensus 191 ~~~g~~~~~~~-v~~~~~~-~~~~~~v~~~~--g~--~i~~~-~~vi~~g~~~~~~~~~~~g~~ 247 (304)
T 4fk1_A 191 SNKNIPVITES-IRTLQGE-GGYLKKVEFHS--GL--RIERA-GGFIVPTFFRPNQFIEQLGCE 247 (304)
T ss_dssp HTTTCCEECSC-EEEEESG-GGCCCEEEETT--SC--EECCC-EEEECCEEECSSCHHHHTTCC
T ss_pred hccceeEeeee-EEEeecC-CCeeeeeeccc--cc--eeeec-ceeeeeccccCChhhhhcCeE
Confidence 37899999875 7777766 67788887654 64 57776 489988887777788888875
No 128
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.44 E-value=3e-07 Score=104.31 Aligned_cols=37 Identities=35% Similarity=0.548 Sum_probs=33.7
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
+.++||||||||++|+++|++|++. |++|+||||+..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~ 43 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGED 43 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 3468999999999999999999998 999999999853
No 129
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.41 E-value=8.7e-07 Score=102.81 Aligned_cols=35 Identities=43% Similarity=0.581 Sum_probs=32.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHh-----cCCCcEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSE-----VSSLKVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAe-----a~G~KVLVLEKG~ 467 (720)
.++||||||||++||++|+.|++ . |++|+||||..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~ 46 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCC
Confidence 35799999999999999999999 8 99999999974
No 130
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.41 E-value=1.3e-06 Score=96.74 Aligned_cols=70 Identities=11% Similarity=0.143 Sum_probs=45.7
Q ss_pred HHHHHHHHhcCCCeE--EEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCC
Q psy14408 637 DAYLTPIAGKRTNLY--VLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 708 (720)
Q Consensus 637 ~a~L~~Aa~e~aGVk--Ii~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGI 708 (720)
..++...+ ++.|++ |+.+++|++|..++++....|++.+. +|+..++.++ .||+|+|.+..+.+..--|+
T Consensus 104 ~~~l~~~~-~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p~ipG~ 176 (464)
T 2xve_A 104 WDYIKGRV-EKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVPEFEGF 176 (464)
T ss_dssp HHHHHHHH-HHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCCCCBTT
T ss_pred HHHHHHHH-HHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccCCCCCc
Confidence 35566655 456887 99999999998872222344555542 3545678998 59999997666654332343
No 131
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.41 E-value=1.4e-07 Score=97.26 Aligned_cols=62 Identities=13% Similarity=0.122 Sum_probs=43.3
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
++.++.++....+..+... +....++..... .+....+.++ .|+++.|......++...|+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d-~v~~~~g~~~~~~~~~~~g~~ 254 (312)
T 4gcm_A 192 KNDKIDFIWSHTLKSINEK-DGKVGSVTLTSTKDGSEETHEAD-GVFIYIGMKPLTAPFKDLGIT 254 (312)
T ss_dssp HCTTEEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGGGGTCB
T ss_pred HhcCcceeeecceeeeecc-ccccccceeeeecCCceeEEeee-eEEeecCCCcCchhHHhccee
Confidence 4778999988888888776 444444444332 4566789998 599999987766666666654
No 132
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.40 E-value=1.1e-06 Score=98.51 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=33.3
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
+.+|||||||||.+|++||++|++. |++|+||||..
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccC
Confidence 3568999999999999999999999 99999999964
No 133
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.37 E-value=2.7e-06 Score=91.15 Aligned_cols=64 Identities=9% Similarity=0.097 Sum_probs=46.3
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+ ++. ..|++. +|+ ++.++ .||+|+|......+|..+|+.
T Consensus 191 ~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~--~g~--~i~~d-~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 191 KAVQAGL-EGLGVRFHLGPVLASLKKA-GEG-LEAHLS--DGE--VIPCD-LVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHH-HTTTCEEEESCCEEEEEEE-TTE-EEEEET--TSC--EEEES-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHH-HHcCCEEEeCCEEEEEEec-CCE-EEEEEC--CCC--EEECC-EEEECcCCCcCHHHHHHCCCC
Confidence 3455555 5789999999999999876 443 344432 463 68898 599999987666688888875
No 134
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.35 E-value=3.4e-07 Score=95.93 Aligned_cols=43 Identities=30% Similarity=0.300 Sum_probs=36.2
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHh-cCCCcEEEEccCCCCCCC
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSE-VSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAe-a~G~KVLVLEKG~~~~~s 472 (720)
...++||||||||++||+||++|++ +.|++|+|+||+...++.
T Consensus 62 ~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~ 105 (326)
T 3fpz_A 62 KFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp HTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred hccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCce
Confidence 3457899999999999999999985 249999999998766543
No 135
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.33 E-value=5.7e-07 Score=96.37 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=41.2
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCCC
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 710 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIgp 710 (720)
++.|++++.+++|+.+..+ ++. ..|++. +|+ ++.++ .||++.|. ..+.++..+|+..
T Consensus 213 ~~~gi~v~~~~~v~~v~~~-~~~-~~v~~~--~g~--~i~~D-~vi~~~g~-~~~~~~~~~gl~~ 269 (401)
T 3vrd_B 213 ENALIEWHPGPDAAVVKTD-TEA-MTVETS--FGE--TFKAA-VINLIPPQ-RAGKIAQSASLTN 269 (401)
T ss_dssp TTCSEEEECTTTTCEEEEE-TTT-TEEEET--TSC--EEECS-EEEECCCE-EECHHHHHTTCCC
T ss_pred HhcCcEEEeCceEEEEEec-ccc-eEEEcC--CCc--EEEee-EEEEecCc-CCchhHhhccccc
Confidence 4679999999999999876 322 223333 364 68898 58888885 4557889999864
No 136
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.32 E-value=1.9e-06 Score=94.45 Aligned_cols=59 Identities=19% Similarity=0.174 Sum_probs=42.8
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHH
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 704 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl 704 (720)
..+.+.+ ++.|++|+++++|++|..+ ++++.+|.. +|+ ++.++ .||+|+|......+|.
T Consensus 195 ~~l~~~l-~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~---~g~--~i~~D-~vv~a~G~~p~~~ll~ 253 (452)
T 2cdu_A 195 DILAKDY-EAHGVNLVLGSKVAAFEEV-DDEIITKTL---DGK--EIKSD-IAILCIGFRPNTELLK 253 (452)
T ss_dssp HHHHHHH-HHTTCEEEESSCEEEEEEE-TTEEEEEET---TSC--EEEES-EEEECCCEEECCGGGT
T ss_pred HHHHHHH-HHCCCEEEcCCeeEEEEcC-CCeEEEEEe---CCC--EEECC-EEEECcCCCCCHHHHH
Confidence 3454555 5789999999999999875 566666543 353 68898 5999999766655543
No 137
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.31 E-value=1.5e-06 Score=95.47 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=33.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhc-CCCcEEEEccCCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDTP 470 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea-~G~KVLVLEKG~~~~ 470 (720)
.||||||||++|++||.+|+++ +|++|+||||+...+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 4999999999999999999985 479999999987653
No 138
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.29 E-value=4.4e-06 Score=90.65 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=44.9
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.++.+.+ ++.|++|+++++|++|. + + +|++. +|+ ++.++ .||+|+|......+|..+|+.
T Consensus 191 ~~l~~~l-~~~GV~i~~~~~v~~i~-~-~----~v~~~--~g~--~i~~D-~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 191 DFVARYH-AAQGVDLRFERSVTGSV-D-G----VVLLD--DGT--RIAAD-MVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHHHHH-HHTTCEEEESCCEEEEE-T-T----EEEET--TSC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHH-HHcCcEEEeCCEEEEEE-C-C----EEEEC--CCC--EEEcC-EEEECcCCCccHHHHHhCCCC
Confidence 3444444 57899999999999998 5 3 45553 364 68898 599999987666788888875
No 139
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.29 E-value=2.5e-06 Score=98.87 Aligned_cols=41 Identities=20% Similarity=0.310 Sum_probs=37.4
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
.++|||||||+|..|++.|..||+. |+|||+|||+.+.++.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccCc
Confidence 3479999999999999999999999 9999999999887554
No 140
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.29 E-value=3.4e-07 Score=93.90 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=44.8
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHH
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 703 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LL 703 (720)
...+.+++..+.+.++... ++...|+++.+. .+...++.++ .||+|.|......+|
T Consensus 199 ~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~i~~d-~vi~a~G~~pn~~~l 255 (314)
T 4a5l_A 199 NHPKIEVIWNSELVELEGD-GDLLNGAKIHNLVSGEYKVVPVA-GLFYAIGHSPNSKFL 255 (314)
T ss_dssp TCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred cccceeeEeeeeeEEEEee-eeccceeEEeecccccceeeccc-cceEecccccChhHh
Confidence 4778999999999999887 777889888764 4556789998 599999976665554
No 141
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.29 E-value=2.4e-06 Score=96.85 Aligned_cols=62 Identities=19% Similarity=0.252 Sum_probs=45.6
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+ ++ +|++. +|+ ++.++ .||+|+|......+|...|+.
T Consensus 232 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~---~v~~~--~g~--~i~~D-~Vi~a~G~~p~~~~l~~~g~~ 293 (588)
T 3ics_A 232 AYVHEHM-KNHDVELVFEDGVDALEEN-GA---VVRLK--SGS--VIQTD-MLILAIGVQPESSLAKGAGLA 293 (588)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEGG-GT---EEEET--TSC--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHH-HHcCCEEEECCeEEEEecC-CC---EEEEC--CCC--EEEcC-EEEEccCCCCChHHHHhcCce
Confidence 3444444 5789999999999999754 33 45543 354 68898 599999987777788888875
No 142
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.28 E-value=4.8e-07 Score=95.50 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=33.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.++||||||||++|+++|++|+++ |++|+||||+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK-GYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCC
Confidence 468999999999999999999999 999999999853
No 143
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.28 E-value=5.2e-06 Score=90.87 Aligned_cols=62 Identities=19% Similarity=0.143 Sum_probs=44.3
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
..+.+.+ ++. ++++.++.|++|..+ + ++..+. . +| .++.++ .||+|+|......+|...|+.
T Consensus 194 ~~l~~~l-~~~-v~i~~~~~v~~i~~~-~-~v~~v~-~--~g--~~i~~D-~Vv~a~G~~p~~~l~~~~gl~ 255 (449)
T 3kd9_A 194 DILEEKL-KKH-VNLRLQEITMKIEGE-E-RVEKVV-T--DA--GEYKAE-LVILATGIKPNIELAKQLGVR 255 (449)
T ss_dssp HHHHHHH-TTT-SEEEESCCEEEEECS-S-SCCEEE-E--TT--EEEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHH-HhC-cEEEeCCeEEEEecc-C-cEEEEE-e--CC--CEEECC-EEEEeeCCccCHHHHHhCCcc
Confidence 4555555 456 999999999999754 3 444442 2 35 378998 599999987666788888775
No 144
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.27 E-value=4.2e-06 Score=95.10 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=32.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
+|||||||||.+|++||.++|+. |+||+|||+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeccc
Confidence 69999999999999999999999 99999999874
No 145
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.22 E-value=3.9e-06 Score=101.89 Aligned_cols=61 Identities=21% Similarity=0.259 Sum_probs=45.4
Q ss_pred CCCeEEEcCeEEEEEEEccCCcEEEEEEEec----C-------CcEEEEEcCcEEEEccCCc-chHHHHHH-cCCC
Q psy14408 647 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS----K-------GETVRVTANKEVILTAGAI-ANAQLLLL-SGIG 709 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt----~-------G~e~tIkAkK~VVVAAGa~-~Sp~LLl~-SGIg 709 (720)
+.|++|+.++.|++|+.+ ++++++|++.+. + |++.++.|+ .||+|+|.. ....|+.. .|+.
T Consensus 382 ~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD-~Vi~A~G~~~~~~~l~~~~~gl~ 455 (1025)
T 1gte_A 382 EEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKAD-VVISAFGSVLRDPKVKEALSPIK 455 (1025)
T ss_dssp HTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECS-EEEECSCEECCCHHHHHHTTTSC
T ss_pred HcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCCCceEEEECC-EEEECCCCCCCchhhhhcccCce
Confidence 679999999999999876 788888877521 2 334578998 599999974 34566655 4664
No 146
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.21 E-value=2.8e-06 Score=94.15 Aligned_cols=63 Identities=21% Similarity=0.243 Sum_probs=45.2
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
..+.+.+ ++.|++|++++.|++|..+ +++.+|.. ++ .++.++ .||+|+|......+|..+|+.
T Consensus 231 ~~l~~~l-~~~Gv~i~~~~~v~~i~~~--~~v~~v~~---~~--~~i~~D-~vi~a~G~~p~~~~l~~~g~~ 293 (480)
T 3cgb_A 231 EYIYKEA-DKHHIEILTNENVKAFKGN--ERVEAVET---DK--GTYKAD-LVLVSVGVKPNTDFLEGTNIR 293 (480)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEES--SBEEEEEE---TT--EEEECS-EEEECSCEEESCGGGTTSCCC
T ss_pred HHHHHHH-HHcCcEEEcCCEEEEEEcC--CcEEEEEE---CC--CEEEcC-EEEECcCCCcChHHHHhCCcc
Confidence 3444444 4789999999999999764 45555543 23 278998 599999987665677777764
No 147
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.20 E-value=8.4e-06 Score=91.48 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=31.9
Q ss_pred cEEEECCcHHHHHHHHHHHhc-CCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea-~G~KVLVLEKG~~~ 469 (720)
||||||||++|++||++|+++ +|++|+|+|++...
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 899999999999999999986 37899999998765
No 148
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.19 E-value=8.1e-07 Score=99.03 Aligned_cols=40 Identities=28% Similarity=0.294 Sum_probs=36.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCC-CcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G-~KVLVLEKG~~~~~s 472 (720)
..+||||||||++||+||++|+++ | ++|+||||....++.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSBTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCCCc
Confidence 457999999999999999999999 9 999999999877655
No 149
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.18 E-value=1.3e-06 Score=94.06 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=36.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCC-CcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G-~KVLVLEKG~~~~~s 472 (720)
..+||||||||++||+||++|+++ | ++|+|+||....++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVGGK 45 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCCCc
Confidence 457999999999999999999999 9 999999998777544
No 150
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.15 E-value=1.2e-06 Score=95.20 Aligned_cols=40 Identities=33% Similarity=0.325 Sum_probs=36.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
.++||||||||++||+||++|+++ |++|+||||+...++.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCCc
Confidence 357999999999999999999999 9999999998776544
No 151
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.13 E-value=1.7e-06 Score=95.08 Aligned_cols=40 Identities=23% Similarity=0.323 Sum_probs=36.2
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
...||||||||++||+||++|+++ |++|+||||+...++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPGGR 49 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCCCc
Confidence 457999999999999999999999 9999999998877554
No 152
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.7e-06 Score=93.93 Aligned_cols=41 Identities=24% Similarity=0.379 Sum_probs=36.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
.++||||||||++||+||++|+++.|++|+||||+...++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 36899999999999999999999658999999999877554
No 153
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.08 E-value=1.7e-06 Score=92.86 Aligned_cols=39 Identities=38% Similarity=0.510 Sum_probs=35.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
++||||||||++||+||++|+++ |++|+||||+...++.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIGGN 39 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSSGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCCcc
Confidence 36999999999999999999999 9999999998766543
No 154
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.05 E-value=2.6e-06 Score=91.47 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=34.0
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
+.++||||||||++||++|+.|+++ |++|+||||...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 4568999999999999999999999 999999999854
No 155
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.05 E-value=2.6e-06 Score=93.35 Aligned_cols=41 Identities=37% Similarity=0.531 Sum_probs=36.5
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
...+||||||||++||+||++|+++ |++|+||||+...++.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCCCc
Confidence 3568999999999999999999999 9999999998776443
No 156
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.03 E-value=2e-05 Score=88.11 Aligned_cols=60 Identities=20% Similarity=0.196 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhcCCCeEEEcCeEEEEEEEccCC------cEEEEEEEec-CCcEEEEEcCcEEEEccCC
Q psy14408 635 AADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN------VATGVEYVNS-KGETVRVTANKEVILTAGA 696 (720)
Q Consensus 635 aa~a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gG------rAtGV~v~dt-~G~e~tIkAkK~VVVAAGa 696 (720)
....||+.++ ++.+..|+.+++|++|...+.+ ...-|++.+. .|+..++.|+ .||+|+|.
T Consensus 146 E~~~Yl~~~A-~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCA-QQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHH-HTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHHHH-HHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 3457888887 6778889999999999875111 2345566554 4677789997 69999995
No 157
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.03 E-value=2.9e-06 Score=93.44 Aligned_cols=39 Identities=26% Similarity=0.348 Sum_probs=35.7
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
.+||||||||++||+||++|+++ |++|+||||....++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAGGK 51 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCCCc
Confidence 57999999999999999999999 9999999999877554
No 158
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.02 E-value=3.1e-06 Score=85.46 Aligned_cols=34 Identities=41% Similarity=0.637 Sum_probs=31.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.+||||||||++|++||++|+++ |++|+||||+.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 47999999999999999999999 99999999864
No 159
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.97 E-value=5.2e-06 Score=90.34 Aligned_cols=39 Identities=31% Similarity=0.332 Sum_probs=35.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC-CCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG-GDTPI 471 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG-~~~~~ 471 (720)
..+||||||||++||+||++|+++ |++|+||||. ...++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRVGG 82 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCCBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccccCC
Confidence 457999999999999999999999 9999999998 76644
No 160
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.96 E-value=4.3e-06 Score=90.42 Aligned_cols=39 Identities=28% Similarity=0.404 Sum_probs=35.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
++||+|||||++|+++|++|+++ |++|+|+||+...++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcCCc
Confidence 47999999999999999999999 9999999998776543
No 161
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.96 E-value=5e-06 Score=86.08 Aligned_cols=68 Identities=18% Similarity=0.161 Sum_probs=50.4
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
..+.+.+ ++.|++|+.++.|++|..+ +++.+|++... +|+..++.++ .||+|+|......+|..+|+.
T Consensus 195 ~~l~~~l-~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~~ 263 (335)
T 2zbw_A 195 KELMKAH-EEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWGLA 263 (335)
T ss_dssp HHHHHHH-HTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSCCC
T ss_pred HHHHhcc-ccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhccee
Confidence 3455555 5779999999999999864 56778888743 4665689998 599999976555567666664
No 162
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.96 E-value=4.5e-06 Score=86.17 Aligned_cols=61 Identities=25% Similarity=0.432 Sum_probs=49.0
Q ss_pred CCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 647 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
+.|++|+.+++|++|..+ ++++.+|++.+. +|++.++.++ .||+|+|......+|..+|+.
T Consensus 202 ~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl~ 263 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGVK 263 (319)
T ss_dssp HTTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCCC
T ss_pred cCCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhcccc
Confidence 679999999999999876 677889988753 4666689998 699999976666677766663
No 163
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.94 E-value=4.2e-06 Score=91.45 Aligned_cols=35 Identities=29% Similarity=0.176 Sum_probs=31.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
+..||||||||++||++|+.|+++ |++|+||||..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 346999999999999999999999 99999999975
No 164
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.93 E-value=5.6e-06 Score=86.73 Aligned_cols=35 Identities=31% Similarity=0.564 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
.++||||||||++|+++|++|++. |+ +|+|||++.
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC
Confidence 468999999999999999999999 99 999999986
No 165
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.91 E-value=7.1e-06 Score=90.40 Aligned_cols=40 Identities=28% Similarity=0.283 Sum_probs=35.7
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~s 472 (720)
...||||||||++||+||+.|+++ |++|+||||....++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPGGR 71 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSBTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCc
Confidence 356999999999999999999999 9999999998776543
No 166
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.89 E-value=6.4e-06 Score=85.21 Aligned_cols=63 Identities=14% Similarity=0.206 Sum_probs=46.3
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHH
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLL 705 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~ 705 (720)
++..+. ++.|++|+.+++|++|..+ +++.+|++.+. +|++.++.++ .||+|+|......+|..
T Consensus 193 ~~~~l~-~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~ 256 (325)
T 2q7v_A 193 AQARAF-ANPKMKFIWDTAVEEIQGA--DSVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFVKD 256 (325)
T ss_dssp HHHHHH-TCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGTT
T ss_pred HHHHHH-hcCCceEecCCceEEEccC--CcEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHHhh
Confidence 344444 4569999999999999864 56788988753 5766789998 69999997655455543
No 167
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.87 E-value=6.8e-06 Score=90.67 Aligned_cols=37 Identities=19% Similarity=0.438 Sum_probs=33.8
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.+.++||||||||++|++||++|++. |++|+||||+.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 34568999999999999999999999 99999999874
No 168
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.86 E-value=9.9e-06 Score=77.01 Aligned_cols=33 Identities=36% Similarity=0.646 Sum_probs=31.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
+||||||||++|+.+|..|++. |.+|+|||++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 6999999999999999999999 99999999984
No 169
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.84 E-value=1.1e-05 Score=89.90 Aligned_cols=40 Identities=28% Similarity=0.233 Sum_probs=35.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCC-CcEEEEccCCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTPIH 472 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G-~KVLVLEKG~~~~~s 472 (720)
..+||||||||++||+||++|+++ | ++|+|+||+...++.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~GG~ 48 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPGGL 48 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSSGG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCCCe
Confidence 357999999999999999999999 8 899999998776544
No 170
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.84 E-value=9.7e-06 Score=83.03 Aligned_cols=66 Identities=12% Similarity=0.103 Sum_probs=49.0
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSG 707 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SG 707 (720)
++..+. ++.|++|+.++.|++|..+ ++++.+|++.+. +|++.++.++ .||+|+|......+|..+|
T Consensus 184 ~~~~l~-~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~g 250 (311)
T 2q0l_A 184 TLEHAK-NNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQED 250 (311)
T ss_dssp HHHHHH-TCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBCTT
T ss_pred HHHHHh-hCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhccc
Confidence 344444 3579999999999999876 577778888743 4666689998 5999999766556665553
No 171
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.83 E-value=8.8e-06 Score=89.54 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=41.7
Q ss_pred CCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 647 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
+.|++|+++++|++|..+ +++ ..|++.+.+|+..++.++ .||+|+|......+ |...|+.
T Consensus 228 ~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~gl~ 289 (468)
T 2qae_A 228 NEKMKFMTSTKVVGGTNN-GDS-VSLEVEGKNGKRETVTCE-ALLVSVGRRPFTGGLGLDKINVA 289 (468)
T ss_dssp HTCCEEECSCEEEEEEEC-SSS-EEEEEECC---EEEEEES-EEEECSCEEECCTTSCHHHHTCC
T ss_pred cCCcEEEeCCEEEEEEEc-CCe-EEEEEEcCCCceEEEECC-EEEECCCcccCCCCCCchhcCCc
Confidence 679999999999999876 444 345554223544578998 59999997666555 5666664
No 172
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.82 E-value=7.2e-06 Score=84.81 Aligned_cols=63 Identities=16% Similarity=0.256 Sum_probs=47.5
Q ss_pred HHHhcCCCeEEEcCeEEEEEEEccCC--cEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCC
Q psy14408 642 PIAGKRTNLYVLKRSKVTKVIINDQN--VATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 708 (720)
Q Consensus 642 ~Aa~e~aGVkIi~gt~VtkIl~e~gG--rAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGI 708 (720)
.++ ++.|++|+.++.|++|..+ ++ ++.+|++.+. +|+..++.++ .||+|+|......+|. +|+
T Consensus 203 ~~~-~~~gv~i~~~~~v~~i~~~-~~~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~~-~~l 268 (333)
T 1vdc_A 203 RAL-SNPKIDVIWNSSVVEAYGD-GERDVLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFLD-GGV 268 (333)
T ss_dssp HHH-TCTTEEEECSEEEEEEEES-SSSSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT-TSS
T ss_pred HHH-hCCCeeEecCCceEEEeCC-CCccceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHhh-ccc
Confidence 444 5789999999999999876 44 7888888753 4666789998 5999999765555443 454
No 173
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.82 E-value=1.4e-05 Score=87.81 Aligned_cols=38 Identities=29% Similarity=0.451 Sum_probs=34.5
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 470 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~ 470 (720)
.++||||||||++|++||++|++. |++|+||||+...+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~G 42 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGALG 42 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcc
Confidence 458999999999999999999999 99999999986543
No 174
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.82 E-value=9.5e-06 Score=89.19 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=46.2
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
.++.+.+ ++.|++|+++++|++|..+ ++++ .|++.+ +|+..++.++ .||+|+|......+ |...|+.
T Consensus 216 ~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~-~g~~~~~~~D-~vv~a~G~~p~~~~l~~~~~gl~ 284 (464)
T 2a8x_A 216 KEIEKQF-KKLGVTILTATKVESIADG-GSQV-TVTVTK-DGVAQELKAE-KVLQAIGFAPNVEGYGLDKAGVA 284 (464)
T ss_dssp HHHHHHH-HHHTCEEECSCEEEEEEEC-SSCE-EEEEES-SSCEEEEEES-EEEECSCEEECCSSSCHHHHTCC
T ss_pred HHHHHHH-HHcCCEEEeCcEEEEEEEc-CCeE-EEEEEc-CCceEEEEcC-EEEECCCCCccCCCCCchhcCCc
Confidence 3444544 4779999999999999876 4443 344442 3655678998 59999997655555 5666664
No 175
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.79 E-value=1.3e-05 Score=87.91 Aligned_cols=39 Identities=33% Similarity=0.452 Sum_probs=34.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCCCCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGDTPIH 472 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~~~~~s 472 (720)
.+||||||||++||++|++|+++ |+ +|+||||+...++.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIGGR 43 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSBTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCCCc
Confidence 57999999999999999999999 98 89999998776544
No 176
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.79 E-value=1.5e-05 Score=89.72 Aligned_cols=37 Identities=35% Similarity=0.548 Sum_probs=34.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.++||||||||++|+++|++|+++ |++|+||||+...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDV 51 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 468999999999999999999999 9999999998654
No 177
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.79 E-value=1.3e-05 Score=82.14 Aligned_cols=56 Identities=18% Similarity=0.330 Sum_probs=44.6
Q ss_pred CCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHH
Q psy14408 647 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLL 704 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl 704 (720)
..|++|+.+++|++|..+ ++++.+|++.+. +|++.++.++ .||+|+|......+|.
T Consensus 192 ~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWLE 248 (310)
T ss_dssp CTTEEEESSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred CCCeEEecCCceEEEEcC-CCcEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHHh
Confidence 369999999999999876 678889998863 4666789998 5999999655545554
No 178
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.78 E-value=1.2e-05 Score=88.97 Aligned_cols=35 Identities=29% Similarity=0.537 Sum_probs=32.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.++||||||||.+|++||++|++. |++|+||||+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 468999999999999999999999 99999999974
No 179
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.77 E-value=1.2e-05 Score=88.08 Aligned_cols=36 Identities=28% Similarity=0.528 Sum_probs=33.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
++||||||||.+|++||.+|++. |++|+||||+...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 37999999999999999999999 9999999998544
No 180
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77 E-value=1.5e-05 Score=88.89 Aligned_cols=34 Identities=29% Similarity=0.559 Sum_probs=32.4
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
++||||||||.+|++||++|++. |++|+||||+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 58999999999999999999999 99999999984
No 181
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.76 E-value=1.2e-05 Score=83.69 Aligned_cols=59 Identities=17% Similarity=0.263 Sum_probs=42.7
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCC
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 708 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGI 708 (720)
++.|++|+++++|++|..+ +++.+|++.+. +|+..++.++ .||+|+|......+|. .|+
T Consensus 202 ~~~gV~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~~-~~l 261 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGD--TTVTGLRVRDTNTGAETTLPVT-GVFVAIGHEPRSGLVR-EAI 261 (335)
T ss_dssp HCTTEEEECSEEEEEEECS--SSCCEEEEEEETTSCCEEECCS-CEEECSCEEECCTTTB-TTB
T ss_pred ccCCcEEEeCceeEEEecC--CcEeEEEEEEcCCCceEEeecC-EEEEccCCccChhHhh-ccc
Confidence 4789999999999999855 35567777653 4555688998 5999999765544443 444
No 182
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.76 E-value=1.2e-05 Score=88.47 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=33.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.++||||||||++|++||.+|++. |++|+||||+...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCc
Confidence 458999999999999999999999 9999999998644
No 183
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.75 E-value=1.3e-05 Score=88.26 Aligned_cols=70 Identities=13% Similarity=0.093 Sum_probs=46.3
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHH--HHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQ--LLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~--LLl~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+++++...|++.+. +|...++.++ .||+|+|...... +|...|+.
T Consensus 228 ~~l~~~l-~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~l~l~~~g~~ 300 (478)
T 1v59_A 228 KATQKFL-KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAE-VLLVAVGRRPYIAGLGAEKIGLE 300 (478)
T ss_dssp HHHHHHH-HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEES-EEEECSCEEECCTTSCTTTTTCC
T ss_pred HHHHHHH-HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECC-EEEECCCCCcCCCCCCchhcCce
Confidence 3455555 47899999999999998710233455666531 2434578998 5999999765554 45566654
No 184
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.75 E-value=1.5e-05 Score=88.24 Aligned_cols=36 Identities=22% Similarity=0.388 Sum_probs=33.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
++||||||||.+|++||++|++. |++|+||||....
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~~ 41 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 68999999999999999999999 9999999996544
No 185
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.73 E-value=1.7e-05 Score=87.14 Aligned_cols=35 Identities=26% Similarity=0.349 Sum_probs=32.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.++||||||||++|++||++|++. |++|+||||+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 357999999999999999999999 99999999983
No 186
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.72 E-value=1.8e-05 Score=86.74 Aligned_cols=33 Identities=33% Similarity=0.528 Sum_probs=31.9
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
++||||||||.+|++||.+|++. |++|+||||+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 57999999999999999999999 9999999997
No 187
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.72 E-value=1.7e-05 Score=87.10 Aligned_cols=34 Identities=32% Similarity=0.434 Sum_probs=32.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
++||||||||.+|++||++|++. |++|+||||+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 37 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCCC
Confidence 58999999999999999999998 99999999983
No 188
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.71 E-value=1.9e-05 Score=87.11 Aligned_cols=34 Identities=29% Similarity=0.559 Sum_probs=32.3
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
++||||||||.+|++||++|++. |++|+|||++.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESKA 37 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 58999999999999999999998 99999999983
No 189
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.71 E-value=2.1e-05 Score=83.90 Aligned_cols=35 Identities=26% Similarity=0.528 Sum_probs=32.1
Q ss_pred cEEEECCcHHHHHHHHHHHhc-CCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea-~G~KVLVLEKG~~~ 469 (720)
||||||||++||++|+.|+++ +|++|+||||....
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 899999999999999999986 48999999998654
No 190
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.69 E-value=2.4e-05 Score=87.01 Aligned_cols=65 Identities=23% Similarity=0.302 Sum_probs=44.3
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHH-H-HHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-L-LLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~-L-Ll~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+ ++....|++. +|+ ++.++ .||+|+|...... | |...|+.
T Consensus 235 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~--~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl~ 301 (490)
T 1fec_A 235 KQLTEQL-RANGINVRTHENPAKVTKN-ADGTRHVVFE--SGA--EADYD-VVMLAIGRVPRSQTLQLEKAGVE 301 (490)
T ss_dssp HHHHHHH-HHTTEEEEETCCEEEEEEC-TTSCEEEEET--TSC--EEEES-EEEECSCEEESCTTSCGGGGTCC
T ss_pred HHHHHHH-HhCCCEEEeCCEEEEEEEc-CCCEEEEEEC--CCc--EEEcC-EEEEccCCCcCccccCchhcCcc
Confidence 3444544 4789999999999999876 4333345443 364 68898 5999999765544 3 5566664
No 191
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.68 E-value=3e-05 Score=86.01 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=34.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 470 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~ 470 (720)
...||+|||||++|++||++|+++ |++|+|+|++...+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCCC
Confidence 356999999999999999999999 99999999987654
No 192
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=2.4e-05 Score=86.16 Aligned_cols=34 Identities=24% Similarity=0.418 Sum_probs=32.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.++||||||||.+|++||.+|++. |++|+|||++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-TCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEccC
Confidence 458999999999999999999999 9999999995
No 193
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.66 E-value=2.3e-05 Score=86.34 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=46.1
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEe-cCCcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~d-t~G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+ ++++ .|++.+ ..|++.++.++ .||+|+|......+ |...|+.
T Consensus 214 ~~l~~~l-~~~gV~i~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~~ 284 (464)
T 2eq6_A 214 ALLRRAL-EKEGIRVRTKTKAVGYEKK-KDGL-HVRLEPAEGGEGEEVVVD-KVLVAVGRKPRTEGLGLEKAGVK 284 (464)
T ss_dssp HHHHHHH-HHTTCEEECSEEEEEEEEE-TTEE-EEEEEETTCCSCEEEEES-EEEECSCEEESCTTSSHHHHTCC
T ss_pred HHHHHHH-HhcCCEEEcCCEEEEEEEe-CCEE-EEEEeecCCCceeEEEcC-EEEECCCcccCCCCCChhhcCce
Confidence 3455555 4789999999999999876 4433 355542 11655578998 59999997655444 4566664
No 194
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.61 E-value=0.0002 Score=73.75 Aligned_cols=33 Identities=24% Similarity=0.327 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~i~~~~ 188 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY-VKNVTIIEYMP 188 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-BSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCcEEEEEcCC
Confidence 3799999999999999999999 99999999873
No 195
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.60 E-value=6.2e-05 Score=82.94 Aligned_cols=35 Identities=29% Similarity=0.267 Sum_probs=32.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.||||||||.+|+.||+.||++ |++|+|+|+....
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCc
Confidence 4999999999999999999999 9999999997643
No 196
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.55 E-value=4.5e-05 Score=86.70 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=32.6
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
...+||||||||.+|++||.+|++. |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 4568999999999999999999999 9999999984
No 197
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.54 E-value=5.7e-05 Score=87.42 Aligned_cols=40 Identities=25% Similarity=0.349 Sum_probs=35.8
Q ss_pred CCcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC
Q psy14408 431 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 471 (720)
Q Consensus 431 d~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~ 471 (720)
....||+|||||++||+||++|+++ |++|+|+|+....++
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCCC
Confidence 3457999999999999999999999 999999999876644
No 198
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.53 E-value=4.3e-05 Score=85.17 Aligned_cols=65 Identities=18% Similarity=0.307 Sum_probs=44.5
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHH-H-HHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-L-LLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~-L-Ll~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+ ++....|++. +|+ ++.++ .||+|+|...... | |..+|+.
T Consensus 239 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~--~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl~ 305 (495)
T 2wpf_A 239 EEVTKQL-TANGIEIMTNENPAKVSLN-TDGSKHVTFE--SGK--TLDVD-VVMMAIGRIPRTNDLQLGNVGVK 305 (495)
T ss_dssp HHHHHHH-HHTTCEEEESCCEEEEEEC-TTSCEEEEET--TSC--EEEES-EEEECSCEEECCGGGTGGGTTCC
T ss_pred HHHHHHH-HhCCCEEEeCCEEEEEEEc-CCceEEEEEC--CCc--EEEcC-EEEECCCCcccccccchhhcCcc
Confidence 3444555 5789999999999999876 4333445543 364 68898 5999999765554 3 4556664
No 199
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.52 E-value=0.00033 Score=77.21 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=30.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||||..|+-+|..|++. |.+|+|+|++.
T Consensus 171 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 202 (464)
T 2eq6_A 171 RLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMP 202 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCC
Confidence 899999999999999999999 99999999974
No 200
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.52 E-value=4.2e-05 Score=85.04 Aligned_cols=64 Identities=17% Similarity=0.208 Sum_probs=43.9
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
..+.+.+ ++.|++|+++++|++|..+ ++++ .+...+|+ ++.++ .||+|+|......+ |...|+.
T Consensus 227 ~~l~~~l-~~~GV~i~~~~~V~~i~~~-~~~v---~v~~~~g~--~i~aD-~Vv~a~G~~p~~~~l~l~~~gl~ 292 (499)
T 1xdi_A 227 LVLEESF-AERGVRLFKNARAASVTRT-GAGV---LVTMTDGR--TVEGS-HALMTIGSVPNTSGLGLERVGIQ 292 (499)
T ss_dssp HHHHHHH-HHTTCEEETTCCEEEEEEC-SSSE---EEEETTSC--EEEES-EEEECCCEEECCSSSCTTTTTCC
T ss_pred HHHHHHH-HHCCCEEEeCCEEEEEEEe-CCEE---EEEECCCc--EEEcC-EEEECCCCCcCCCcCCchhcCce
Confidence 3455555 5789999999999999876 4443 33333453 68898 59999997655545 4555654
No 201
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.49 E-value=6e-05 Score=84.64 Aligned_cols=55 Identities=20% Similarity=0.355 Sum_probs=44.5
Q ss_pred CCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHH
Q psy14408 648 TNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLL 704 (720)
Q Consensus 648 aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl 704 (720)
.|++|+.++.|++|..+ ++++.+|++.+. +|++.++.++ .||+|+|......+|.
T Consensus 404 ~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l~ 459 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWLE 459 (521)
T ss_dssp TTEEEECSEEEEEEEEC-SSSEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGGT
T ss_pred CCcEEEeCCEEEEEEcC-CCcEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHHh
Confidence 69999999999999876 778889998863 5766789998 5999999765545543
No 202
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.47 E-value=0.00084 Score=68.49 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+++..
T Consensus 146 ~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 177 (310)
T 1fl2_A 146 RVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAP 177 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-BSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHh-CCEEEEEEeCc
Confidence 799999999999999999999 99999999874
No 203
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.46 E-value=6.7e-05 Score=83.26 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=33.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCC---CcEEEEccCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSS---LKVLLIEAGGDT 469 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G---~KVLVLEKG~~~ 469 (720)
+++||||||||.+|++||.+|++. | ++|+|||++...
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCCC
Confidence 358999999999999999999998 7 999999998653
No 204
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.45 E-value=0.00042 Score=76.23 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=30.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||||..|+-+|..|++. |.+|+|||++.
T Consensus 185 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 216 (478)
T 1v59_A 185 RLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQP 216 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 899999999999999999999 99999999984
No 205
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.45 E-value=8.6e-05 Score=86.93 Aligned_cols=39 Identities=26% Similarity=0.268 Sum_probs=35.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 471 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~ 471 (720)
...||||||||++|++||++|+++ |++|+|+|+....++
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~GG 426 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKIGG 426 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCC
Confidence 457999999999999999999999 999999999876543
No 206
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.44 E-value=9.8e-05 Score=88.20 Aligned_cols=39 Identities=26% Similarity=0.367 Sum_probs=35.4
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 471 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~ 471 (720)
...||+|||||++||+||++|+++ |++|+|||+....++
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCCC
Confidence 456999999999999999999999 999999999877654
No 207
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.44 E-value=0.00099 Score=68.00 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=30.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 176 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANI-CKKVYLIHRRD 176 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-SSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeeCC
Confidence 4899999999999999999999 99999999873
No 208
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.42 E-value=9.3e-05 Score=85.58 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=35.0
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 471 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~~~ 471 (720)
..+||||||||.+|+.||..|+++ |++|+|+|++...++
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEIGG 410 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCC
Confidence 357999999999999999999999 999999999876543
No 209
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=97.40 E-value=2.3e-05 Score=99.00 Aligned_cols=6 Identities=50% Similarity=0.960 Sum_probs=0.0
Q ss_pred CCCCCC
Q psy14408 71 NPFSPI 76 (720)
Q Consensus 71 ~~~~~~ 76 (720)
.||+|.
T Consensus 1541 sp~~~~ 1546 (1752)
T 3h0g_A 1541 SPFSSA 1546 (1752)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 355554
No 210
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.35 E-value=9.7e-05 Score=79.12 Aligned_cols=59 Identities=20% Similarity=0.261 Sum_probs=43.1
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.++.+.+ ++.|++|+++++|++|. . .+|++.+ | + +.++ .||+|+|......+|..+|+.
T Consensus 187 ~~l~~~l-~~~gV~i~~~~~v~~i~-~-----~~v~~~~--g-~--i~~D-~vi~a~G~~p~~~ll~~~gl~ 245 (367)
T 1xhc_A 187 NMIKDML-EETGVKFFLNSELLEAN-E-----EGVLTNS--G-F--IEGK-VKICAIGIVPNVDLARRSGIH 245 (367)
T ss_dssp HHHHHHH-HHTTEEEECSCCEEEEC-S-----SEEEETT--E-E--EECS-CEEEECCEEECCHHHHHTTCC
T ss_pred HHHHHHH-HHCCCEEEcCCEEEEEE-e-----eEEEECC--C-E--EEcC-EEEECcCCCcCHHHHHhCCCC
Confidence 3455555 57899999999999996 2 2455533 4 2 8898 499999977666688888875
No 211
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.34 E-value=0.0013 Score=67.89 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++++.
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~v~~~~ 185 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDT-ARRITLIHRRP 185 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEcCC
Confidence 3799999999999999999999 99999999874
No 212
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.33 E-value=0.0015 Score=67.23 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|+|||+|..|+-+|..|++. |.+|+|+++..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~-g~~V~lv~~~~ 192 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRD 192 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHhc-CCeEEEEecCC
Confidence 3799999999999999999999 99999999873
No 213
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.32 E-value=0.00011 Score=88.87 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=46.2
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEe--c---CCcEEEEEcCcEEEEccCCcchHHHHHHcC
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVN--S---KGETVRVTANKEVILTAGAIANAQLLLLSG 707 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~d--t---~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SG 707 (720)
++.|++|++++.|++|..++++++.+|++.+ . +|+..+|.++ .||+|+|......++...|
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred HhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 3789999999999999863136778888875 2 2444689998 5999999776667776655
No 214
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.31 E-value=0.00064 Score=74.40 Aligned_cols=33 Identities=21% Similarity=0.457 Sum_probs=30.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-+|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 203 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF-GTKVTILEGAG 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCC
Confidence 3899999999999999999999 99999999873
No 215
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.30 E-value=0.00088 Score=73.70 Aligned_cols=61 Identities=16% Similarity=0.154 Sum_probs=41.5
Q ss_pred CCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHH--HHHcCCC
Q psy14408 647 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQL--LLLSGIG 709 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~L--Ll~SGIg 709 (720)
+.|++|+++++|++|..+ +++...|++.+. .+...++.++ .||+|+|......+ |...|+.
T Consensus 232 ~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~~~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~~ 295 (474)
T 1zmd_A 232 KQGFKFKLNTKVTGATKK-SDGKIDVSIEAASGGKAEVITCD-VLLVCIGRRPFTKNLGLEELGIE 295 (474)
T ss_dssp HTTCEEECSEEEEEEEEC-TTSCEEEEEEETTSCCCEEEEES-EEEECSCEEECCTTSSHHHHTCC
T ss_pred HCCCEEEeCceEEEEEEc-CCceEEEEEEecCCCCceEEEcC-EEEECcCCCcCCCcCCchhcCCc
Confidence 679999999999999876 443233444321 1223478998 59999997665555 5666664
No 216
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.29 E-value=0.0042 Score=67.57 Aligned_cols=51 Identities=16% Similarity=0.087 Sum_probs=39.2
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcch
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 699 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~S 699 (720)
.+.|++|+.++.|++|..+ +++ ..|.+.+. +|+..++.++ .||+|+|....
T Consensus 327 ~~~~v~i~~~~~v~~v~~~-~~~-~~v~~~~~~~g~~~~~~~D-~Vv~AtG~~p~ 378 (463)
T 3s5w_A 327 GIPRHAFRCMTTVERATAT-AQG-IELALRDAGSGELSVETYD-AVILATGYERQ 378 (463)
T ss_dssp CCCCSEEETTEEEEEEEEE-TTE-EEEEEEETTTCCEEEEEES-EEEECCCEECC
T ss_pred CCCCeEEEeCCEEEEEEec-CCE-EEEEEEEcCCCCeEEEECC-EEEEeeCCCCC
Confidence 3579999999999999876 443 45666654 5777789998 69999997654
No 217
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.00035 Score=77.31 Aligned_cols=59 Identities=22% Similarity=0.180 Sum_probs=40.4
Q ss_pred CCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHH-HHHcCCC
Q psy14408 647 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL-LLLSGIG 709 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~L-Ll~SGIg 709 (720)
+.|++|+++++|++|..++++++..|++. +|+ .++.++ .||+|+|......| |..+|+.
T Consensus 238 ~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~--~G~-~~i~~D-~vv~a~G~~p~~~l~l~~~gl~ 297 (479)
T 2hqm_A 238 KEGINVHKLSKIVKVEKNVETDKLKIHMN--DSK-SIDDVD-ELIWTIGRKSHLGMGSENVGIK 297 (479)
T ss_dssp HHTCEEECSCCEEEEEECC-CCCEEEEET--TSC-EEEEES-EEEECSCEEECCCSSGGGGTCC
T ss_pred hCCeEEEeCCEEEEEEEcCCCcEEEEEEC--CCc-EEEEcC-EEEECCCCCCccccChhhcCce
Confidence 56999999999999987523323445543 353 478998 59999997555445 5666664
No 218
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.27 E-value=0.00044 Score=75.86 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=30.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 200 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGL-GAKTHLFEMFD 200 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCC
Confidence 899999999999999999999 99999999873
No 219
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.26 E-value=0.0006 Score=74.64 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=30.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|.+|+-+|..|++. |.+|+|+|++.
T Consensus 169 ~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~ 200 (455)
T 2yqu_A 169 RLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMD 200 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEecCC
Confidence 799999999999999999999 99999999873
No 220
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.24 E-value=0.00013 Score=81.28 Aligned_cols=57 Identities=14% Similarity=0.142 Sum_probs=43.9
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
++.|++|++++.|++|..+ +++.+|+.. +|+ ++.++ .||+|+|......|+..+|+.
T Consensus 268 ~~~GV~v~~~~~v~~i~~~--~~v~~v~~~--~g~--~i~aD-~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 268 ERWGIDYVHIPNVKRVEGN--EKVERVIDM--NNH--EYKVD-ALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHTCEEEECSSEEEEECS--SSCCEEEET--TCC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HhCCcEEEeCCeeEEEecC--CceEEEEeC--CCe--EEEeC-EEEECCCcCcCchHHHhcCCC
Confidence 3679999999999999754 445566542 353 78998 599999987777788888874
No 221
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.23 E-value=0.00019 Score=78.47 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=31.8
Q ss_pred cEEEECCcHHHHHHHHHHHhc-CCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea-~G~KVLVLEKG~~~ 469 (720)
||||||||.+|++||.+|++. +|++|+|||++...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 899999999999999999985 48999999998654
No 222
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.20 E-value=0.00016 Score=78.90 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=32.2
Q ss_pred ccEEEECCcHHHHHHHHHHHh---cCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAe---a~G~KVLVLEKG~~~ 469 (720)
.||||||||++|++||.+|++ . |++|+|||++...
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDYF 42 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCCC
Confidence 499999999999999999999 7 9999999998643
No 223
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.20 E-value=0.0011 Score=72.84 Aligned_cols=32 Identities=31% Similarity=0.380 Sum_probs=30.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 173 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 204 (464)
T 2a8x_A 173 SIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLP 204 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 899999999999999999999 99999999984
No 224
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.19 E-value=0.0023 Score=70.26 Aligned_cols=32 Identities=16% Similarity=0.370 Sum_probs=30.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 176 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 207 (468)
T 2qae_A 176 TMVVIGGGVIGLELGSVWARL-GAEVTVVEFAP 207 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHh-CCEEEEEecCC
Confidence 799999999999999999999 99999999984
No 225
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.19 E-value=0.0021 Score=72.13 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=30.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 357 ~V~ViGgG~~g~E~A~~L~~~-g~~Vtlv~~~~ 388 (521)
T 1hyu_A 357 RVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAP 388 (521)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-BSEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCc
Confidence 899999999999999999999 99999999873
No 226
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.18 E-value=0.0026 Score=65.49 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|++++.
T Consensus 154 ~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 185 (325)
T 2q7v_A 154 KVVVIGGGDAAVEEGMFLTKF-ADEVTVIHRRD 185 (325)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 799999999999999999999 99999999873
No 227
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.17 E-value=0.00095 Score=73.57 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=30.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 199 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSF-GSEVTVVALED 199 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 799999999999999999999 99999999873
No 228
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.12 E-value=0.00062 Score=74.63 Aligned_cols=32 Identities=16% Similarity=0.379 Sum_probs=30.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 179 ~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~ 210 (470)
T 1dxl_A 179 KLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFAS 210 (470)
T ss_dssp EEEESCCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCC
Confidence 899999999999999999999 99999999873
No 229
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.06 E-value=0.001 Score=73.95 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=30.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|+++
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 209 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRL-GIDSYIFARGN 209 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSS
T ss_pred eEEEECChHHHHHHHHHHHHc-CCeEEEEecCC
Confidence 899999999999999999999 99999999873
No 230
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.06 E-value=0.0013 Score=73.04 Aligned_cols=32 Identities=19% Similarity=0.491 Sum_probs=30.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 184 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 215 (499)
T 1xdi_A 184 HLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQD 215 (499)
T ss_dssp SEEEESCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 899999999999999999999 99999999984
No 231
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.05 E-value=0.0004 Score=76.91 Aligned_cols=36 Identities=25% Similarity=0.194 Sum_probs=33.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCC--CcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSS--LKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G--~KVLVLEKG~~~ 469 (720)
.+||||||||++|+.+|..|++. | ++|+|+|+....
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVP 43 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcC
Confidence 46999999999999999999998 8 999999998655
No 232
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.04 E-value=0.0014 Score=72.51 Aligned_cols=32 Identities=16% Similarity=0.326 Sum_probs=30.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||||..|+-+|..|++. |.+|+|+|+..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~ 218 (482)
T 1ojt_A 187 KLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMD 218 (482)
T ss_dssp EEEEESCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCeEEEEEECC
Confidence 899999999999999999999 99999999873
No 233
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.99 E-value=0.00036 Score=77.28 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=32.7
Q ss_pred cccEEEECCcHHHHHHHHHHHh-c-C----CCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSE-V-S----SLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAe-a-~----G~KVLVLEKG~~~ 469 (720)
.+||||||||++|+.||..|++ . + |++|+|+|+....
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 4699999999999999999998 5 2 7999999998654
No 234
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.99 E-value=0.0026 Score=65.01 Aligned_cols=60 Identities=10% Similarity=0.112 Sum_probs=46.6
Q ss_pred CCCeEEEcCeEEEEEEEccCCcEEEEEEEec-CCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 647 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 647 ~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt-~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
+.|++++.+++|++|..+ ++ +.+|++.+. .|+..++.++ .||+|+|......+|..+|+.
T Consensus 201 ~~gv~~~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~~ 261 (332)
T 3lzw_A 201 ASKVNVLTPFVPAELIGE-DK-IEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGLD 261 (332)
T ss_dssp HSSCEEETTEEEEEEECS-SS-CCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSCC
T ss_pred cCCeEEEeCceeeEEecC-Cc-eEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCcc
Confidence 568999999999999865 44 667888763 4556789998 699999977666777777765
No 235
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.96 E-value=0.00028 Score=82.85 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=33.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCC--------CcEEEEccCC-CC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSS--------LKVLLIEAGG-DT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G--------~KVLVLEKG~-~~ 469 (720)
..+|+|||||++||+||++|+++ | ++|+|+|+.. ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 46999999999999999999999 8 9999999987 55
No 236
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.93 E-value=0.003 Score=69.48 Aligned_cols=32 Identities=28% Similarity=0.271 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|++++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 220 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHD 220 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCC
Confidence 799999999999999999999 99999999873
No 237
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.80 E-value=0.0007 Score=74.22 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=41.8
Q ss_pred HHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 639 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 639 ~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.+.+.. ++.|++++++++|+++..+ .|.+. +|+ ++.++ .||+|+|......+|..+|+.
T Consensus 193 ~~~~~l-~~~gV~i~~~~~v~~~~~~------~v~~~--~g~--~~~~D-~vl~a~G~~Pn~~~~~~~gl~ 251 (437)
T 4eqs_A 193 PILDEL-DKREIPYRLNEEINAINGN------EITFK--SGK--VEHYD-MIIEGVGTHPNSKFIESSNIK 251 (437)
T ss_dssp HHHHHH-HHTTCCEEESCCEEEEETT------EEEET--TSC--EEECS-EEEECCCEEESCGGGTTSSCC
T ss_pred HHHHHh-hccceEEEeccEEEEecCC------eeeec--CCe--EEeee-eEEEEeceecCcHHHHhhhhh
Confidence 344444 5789999999999988532 23333 354 68898 599999977666677777775
No 238
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.78 E-value=0.0029 Score=69.36 Aligned_cols=32 Identities=19% Similarity=0.353 Sum_probs=30.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++.
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 209 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARL-GSKVTVLARNT 209 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEEECC
Confidence 799999999999999999999 99999999873
No 239
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.74 E-value=0.0028 Score=70.53 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC--CCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVS--SLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~--G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++.. |.+|+|||++.
T Consensus 193 ~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 227 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN 227 (495)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC
Confidence 8999999999999999998752 89999999874
No 240
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.73 E-value=0.0022 Score=70.24 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=31.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.|||||||..|+-+|..|++. |.+|+|+|++..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDK 181 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSC
T ss_pred EEEEECCccchhhhHHHHHhc-CCcceeeeeecc
Confidence 799999999999999999999 999999999853
No 241
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.72 E-value=0.0027 Score=70.56 Aligned_cols=33 Identities=18% Similarity=0.140 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC--CCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVS--SLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~--G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++.. |.+|+|||++.
T Consensus 189 ~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 189 RALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 223 (490)
T ss_dssp EEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC
Confidence 8999999999999999998752 89999999984
No 242
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.63 E-value=0.0013 Score=71.05 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
...|||||||.+|+.||..|++. |.+|+|+|+....
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGK-CDDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCC
Confidence 34899999999999999999666 9999999998764
No 243
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.55 E-value=0.00096 Score=74.76 Aligned_cols=34 Identities=12% Similarity=0.230 Sum_probs=31.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
-.|||||||.+|+.+|.+|+++ |++|+|||+..+
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~ 76 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY 76 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE
T ss_pred CCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC
Confidence 4799999999999999999998 999999999754
No 244
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.31 E-value=0.013 Score=65.49 Aligned_cols=31 Identities=26% Similarity=0.325 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGI-GLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEecc
Confidence 599999999999999999999 9999999975
No 245
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.79 E-value=0.05 Score=60.12 Aligned_cols=52 Identities=12% Similarity=0.125 Sum_probs=39.4
Q ss_pred CCeEEEcCeEEEEEEEccCC-cEEEEEEEec-------------CCcEEEEEcCcEEEEccCCcchH
Q psy14408 648 TNLYVLKRSKVTKVIINDQN-VATGVEYVNS-------------KGETVRVTANKEVILTAGAIANA 700 (720)
Q Consensus 648 aGVkIi~gt~VtkIl~e~gG-rAtGV~v~dt-------------~G~e~tIkAkK~VVVAAGa~~Sp 700 (720)
.|++|++++.+++|+.++++ ++.+|++.+. +|+..++.|+ .||+|+|.....
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 79999999999999865226 8888887632 2444689998 699999965544
No 246
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.68 E-value=0.02 Score=64.03 Aligned_cols=50 Identities=20% Similarity=0.259 Sum_probs=33.1
Q ss_pred cCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCc--EEEEEcCcEEEEccCCcchH
Q psy14408 646 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGE--TVRVTANKEVILTAGAIANA 700 (720)
Q Consensus 646 e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~--e~tIkAkK~VVVAAGa~~Sp 700 (720)
++.||+|+++++|++|.-+ +.+. .....+|. +.+|.|+ .||.|+|.-.++
T Consensus 283 ~~~GV~v~~~~~v~~v~~~--~~~~--~~~~~dg~~~~~~i~ad-~viwa~Gv~~~~ 334 (502)
T 4g6h_A 283 ENTSIKVHLRTAVAKVEEK--QLLA--KTKHEDGKITEETIPYG-TLIWATGNKARP 334 (502)
T ss_dssp HHTTCEEETTEEEEEECSS--EEEE--EEECTTSCEEEEEEECS-EEEECCCEECCH
T ss_pred HhcceeeecCceEEEEeCC--ceEE--EEEecCcccceeeeccC-EEEEccCCcCCH
Confidence 4789999999999998532 2222 22222343 3579998 699999975553
No 247
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.55 E-value=0.031 Score=67.49 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=30.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|||||+|..|+-+|..|++. |.+|+|||+..
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~ 317 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAAT-GGVVAVIDARS 317 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGG-TCCSEEEESCS
T ss_pred eEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCC
Confidence 799999999999999999999 99999999873
No 248
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.27 E-value=0.013 Score=63.95 Aligned_cols=36 Identities=17% Similarity=0.306 Sum_probs=33.0
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
..+|+|||+|.+|+.+|..|++. |.+|+|+|++...
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILDRP 184 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCccc
Confidence 35999999999999999999999 9999999998654
No 249
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.08 E-value=0.019 Score=51.40 Aligned_cols=31 Identities=39% Similarity=0.539 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|..|..+|..|++. |++|+++|+.
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~ 36 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEK-GHDIVLIDID 36 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 699999999999999999999 9999999985
No 250
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.07 E-value=0.017 Score=62.26 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=32.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDS-GTPASIGIILEYP 181 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCcc
Confidence 899999999999999999999 9999999998755
No 251
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.02 E-value=0.02 Score=52.13 Aligned_cols=31 Identities=32% Similarity=0.561 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|+|+|..|..+|..|+++ |++|+++|+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECC
Confidence 699999999999999999999 9999999986
No 252
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.96 E-value=0.017 Score=59.20 Aligned_cols=34 Identities=12% Similarity=0.266 Sum_probs=31.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||||..|+-+|..|++. |.+|+|||+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEeccccc
Confidence 799999999999999999998 9999999998655
No 253
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.90 E-value=0.021 Score=53.19 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-.|+|||+|..|..+|..|.+. |++|+++|+.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 3799999999999999999999 9999999986
No 254
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.87 E-value=0.023 Score=52.21 Aligned_cols=31 Identities=23% Similarity=0.507 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||.|-.|..+|..|.+. |++|+++|+.
T Consensus 9 ~viIiG~G~~G~~la~~L~~~-g~~v~vid~~ 39 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLAS-DIPLVVIETS 39 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 799999999999999999999 9999999987
No 255
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.60 E-value=0.024 Score=62.21 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=32.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||||..|+-+|..|++. |.+|+|+|++...
T Consensus 173 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 173 HLVVVGGGYIGLELGIAYRKL-GAQVSVVEARERI 206 (458)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred eEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCcc
Confidence 799999999999999999999 9999999998765
No 256
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.56 E-value=0.027 Score=48.84 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCC-CcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSS-LKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G-~KVLVLEKG 466 (720)
.|+|||+|..|..+|..|+++ | ++|+++++.
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~ 38 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTS-SNYSVTVADHD 38 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHC-SSEEEEEEESC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCceEEEEeCC
Confidence 699999999999999999999 9 999999986
No 257
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.42 E-value=0.027 Score=57.20 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=31.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|+|+....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccccc
Confidence 3799999999999999999999 9999999987543
No 258
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.32 E-value=0.032 Score=59.45 Aligned_cols=35 Identities=23% Similarity=0.426 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-+|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 180 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCEQV 180 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCcch
Confidence 3899999999999999999999 9999999998654
No 259
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.27 E-value=0.031 Score=59.61 Aligned_cols=35 Identities=34% Similarity=0.413 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCee
Confidence 3899999999999999999999 9999999998654
No 260
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.21 E-value=0.034 Score=49.79 Aligned_cols=31 Identities=16% Similarity=0.378 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|..|..+|..|++. |++|+++|+.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 599999999999999999999 9999999985
No 261
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.16 E-value=0.047 Score=50.61 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|-.|...|..|.+. |++|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 699999999999999999999 9999999986
No 262
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.62 E-value=0.051 Score=58.66 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=32.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQPRL 180 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCcc
Confidence 3899999999999999999999 9999999998654
No 263
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.52 E-value=0.053 Score=56.37 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTGL 201 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECC----
T ss_pred EEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCCC
Confidence 799999999999999999999 9999999998654
No 264
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.51 E-value=0.041 Score=60.67 Aligned_cols=35 Identities=31% Similarity=0.456 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-+|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 221 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVEL-GKKVRMIERNDHI 221 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCch
Confidence 4899999999999999999999 9999999998654
No 265
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.35 E-value=0.062 Score=57.23 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..+|.+ |++|+|+|..
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~ 38 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSC
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECC
Confidence 699999999999999999999 9999999964
No 266
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.24 E-value=0.062 Score=59.40 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccch
Confidence 3799999999999999999999 9999999998654
No 267
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.10 E-value=0.07 Score=55.21 Aligned_cols=31 Identities=16% Similarity=0.373 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |++|+|+|+.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~ 47 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQT 47 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 599999999999999999999 9999999986
No 268
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.05 E-value=0.071 Score=52.36 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|-.|..+|..|.++ |++|+|+|+.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 489999999999999999999 9999999986
No 269
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=92.88 E-value=0.082 Score=57.50 Aligned_cols=34 Identities=15% Similarity=0.381 Sum_probs=31.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|+....
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 151 RLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAARV 184 (431)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCcc
Confidence 799999999999999999999 9999999998654
No 270
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=92.87 E-value=0.08 Score=58.67 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=32.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 176 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 176 SVAVFGPGVIGLELGQALSRL-GVIVKVFGRSGSV 209 (492)
T ss_dssp EEEEESSCHHHHHHHHHHHHT-TCEEEEECCTTCC
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCcc
Confidence 799999999999999999999 9999999998765
No 271
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.80 E-value=0.08 Score=57.60 Aligned_cols=34 Identities=21% Similarity=0.410 Sum_probs=32.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGERV 183 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCcc
Confidence 899999999999999999999 9999999998754
No 272
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.73 E-value=0.087 Score=54.23 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|+++ |++|+|+|+..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 599999999999999999999 99999999863
No 273
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.71 E-value=0.086 Score=56.79 Aligned_cols=35 Identities=31% Similarity=0.616 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|+|+....
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL-GLSVTILEAGDEL 178 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCcc
Confidence 3799999999999999999999 9999999998654
No 274
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.65 E-value=0.1 Score=52.76 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.|.|||+|..|...|..|+++ |++|++++|...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCcc
Confidence 489999999999999999999 999999998753
No 275
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.59 E-value=0.094 Score=54.85 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|+++ |++|++++|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 699999999999999999999 99999999874
No 276
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.42 E-value=0.092 Score=57.11 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=31.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCc-EEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLK-VLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~K-VLVLEKG~~~ 469 (720)
-+|||||+|..|+-+|..|++. |.+ |+|++++...
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCCCc
Confidence 3899999999999999999999 999 9999998643
No 277
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=92.31 E-value=0.098 Score=56.95 Aligned_cols=34 Identities=29% Similarity=0.392 Sum_probs=31.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHERV 184 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSST
T ss_pred eEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCCch
Confidence 799999999999999999999 9999999998654
No 278
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.15 E-value=0.1 Score=53.02 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=32.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|+++....
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI-ASEVHLIHRRDGF 180 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCcc
Confidence 3799999999999999999999 9999999998654
No 279
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.14 E-value=0.1 Score=54.36 Aligned_cols=32 Identities=28% Similarity=0.279 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|+++ |++|++++|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 699999999999999999999 99999999974
No 280
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.04 E-value=0.12 Score=52.77 Aligned_cols=31 Identities=35% Similarity=0.349 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |++|++++|.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECC
Confidence 599999999999999999999 9999999985
No 281
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.99 E-value=0.11 Score=57.20 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=32.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARL-GAKVTVVEFLDTI 233 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEeccccc
Confidence 799999999999999999999 9999999998755
No 282
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.89 E-value=0.14 Score=53.97 Aligned_cols=31 Identities=35% Similarity=0.481 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |++|++++|.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 699999999999999999999 9999999985
No 283
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=91.88 E-value=0.12 Score=57.79 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=31.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|||||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHL-GIKTTLLELADQV 186 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCCcc
Confidence 799999999999999999999 9999999998654
No 284
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.88 E-value=0.11 Score=49.39 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|..|..+|..|.+..|++|+++|+.
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 69999999999999999987427999999986
No 285
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.86 E-value=0.12 Score=53.51 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=32.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++++...
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~~~ 190 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRDEF 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCCcC
Confidence 3799999999999999999999 9999999998654
No 286
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=91.86 E-value=0.12 Score=58.59 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|||||||..|+-+|..|++. |.+|+|+|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL-GGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEECC
Confidence 699999999999999999999 9999999997
No 287
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.83 E-value=0.11 Score=57.17 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=31.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|||||+|..|+=+|..|++. |.+|+|+++....
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~~ 232 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTAP 232 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSCC
T ss_pred EEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCCC
Confidence 799999999999999999999 9999999987553
No 288
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=91.81 E-value=0.13 Score=55.09 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=32.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|+....
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRV 177 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcc
Confidence 799999999999999999999 9999999998655
No 289
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.75 E-value=0.12 Score=52.58 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=32.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++++...
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCcc
Confidence 3799999999999999999999 9999999998654
No 290
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.74 E-value=0.13 Score=52.34 Aligned_cols=34 Identities=21% Similarity=0.434 Sum_probs=30.8
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
...|+|||+|-.|..+|..|++. |. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 45899999999999999999999 97 899999874
No 291
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.72 E-value=0.11 Score=58.72 Aligned_cols=35 Identities=9% Similarity=0.109 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++|.+.+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQY 213 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCCC
T ss_pred ceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCCc
Confidence 3899999999999999999999 9999999998653
No 292
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=91.71 E-value=0.14 Score=55.06 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=32.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|+....
T Consensus 154 ~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 154 NAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRV 187 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCch
Confidence 799999999999999999999 9999999998655
No 293
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.70 E-value=0.12 Score=57.60 Aligned_cols=32 Identities=19% Similarity=0.492 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
..|.|||+|..|+..|..||++ |++|+++|+.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI-GHDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 4799999999999999999999 9999999974
No 294
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.65 E-value=0.16 Score=49.98 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=30.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.|.|||+|..|.+.|..|+++ |++|++++|...
T Consensus 21 ~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~~ 53 (209)
T 2raf_A 21 EITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKDQ 53 (209)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECTTCC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 699999999999999999999 999999998743
No 295
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.61 E-value=0.12 Score=53.43 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=30.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|+++ |++|++++|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 699999999999999999999 99999999873
No 296
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.51 E-value=0.15 Score=54.09 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|.|||+|..|...|..|+++ |++|+|+|+.
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~ 38 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSC
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 589999999999999999999 9999999986
No 297
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.51 E-value=0.13 Score=58.21 Aligned_cols=35 Identities=9% Similarity=0.226 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++|.+..
T Consensus 192 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhh-CCEEEEEECCCCc
Confidence 3899999999999999999999 9999999998653
No 298
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.41 E-value=0.15 Score=52.88 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC--cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG~ 467 (720)
.|+|||+|..|...|..|+++ |+ +|+++|+..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 699999999999999999999 98 999999863
No 299
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.38 E-value=0.14 Score=51.74 Aligned_cols=33 Identities=6% Similarity=0.146 Sum_probs=30.5
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.--|+|||||-.|...|..|.++ |.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 34899999999999999999999 9999999864
No 300
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=91.38 E-value=0.11 Score=58.59 Aligned_cols=35 Identities=11% Similarity=0.202 Sum_probs=32.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++|.+..
T Consensus 186 krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCCc
Confidence 3799999999999999999999 9999999998753
No 301
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=91.33 E-value=0.16 Score=55.67 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=32.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 174 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 174 DMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDRA 207 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcC
Confidence 799999999999999999999 9999999998654
No 302
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.11 E-value=0.17 Score=50.95 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++++...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCC
Confidence 3899999999999999999999 9999999998654
No 303
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.08 E-value=0.16 Score=55.26 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=32.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLENL 182 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEEccCcc
Confidence 799999999999999999999 9999999998654
No 304
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.05 E-value=0.13 Score=53.68 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=31.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|++++...
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKN-AASVTLVHRGHEF 198 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSC
T ss_pred cEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCCC
Confidence 799999999999999999999 9999999998654
No 305
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.04 E-value=0.11 Score=54.09 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
--|||||+|-.|+..|..|.+. |++|+|++...
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 3799999999999999999999 99999999753
No 306
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.99 E-value=0.16 Score=52.57 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=28.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEcc
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA 465 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEK 465 (720)
.|.|||+|..|...|..|+++ |++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 489999999999999999999 999999998
No 307
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.94 E-value=0.18 Score=55.98 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=32.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.+.+.|||.|..|+..|..||++ |++|+++|+...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 46899999999999999999999 999999998654
No 308
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.74 E-value=0.18 Score=55.92 Aligned_cols=31 Identities=32% Similarity=0.444 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|+..|..|+++ |++|+++|+.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~ 34 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTD 34 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECC
Confidence 689999999999999999999 9999999985
No 309
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.65 E-value=0.2 Score=52.42 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |++|++++|.
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~ 36 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALK-GQSVLAWDID 36 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 699999999999999999999 9999999985
No 310
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=90.63 E-value=0.2 Score=54.85 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=32.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 182 ~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 182 KLGVIGAGVIGLELGSVWARL-GAEVTVLEAMDKF 215 (476)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCc
Confidence 799999999999999999999 9999999998654
No 311
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.57 E-value=0.18 Score=55.90 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|+++ |++|+|+|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999753
No 312
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=90.50 E-value=0.2 Score=56.56 Aligned_cols=34 Identities=21% Similarity=0.414 Sum_probs=31.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRER-GIEVTLVEMANQV 222 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCcc
Confidence 799999999999999999999 9999999998654
No 313
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.38 E-value=0.21 Score=55.69 Aligned_cols=35 Identities=9% Similarity=0.176 Sum_probs=32.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecCcc
Confidence 3799999999999999999999 9999999998654
No 314
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.35 E-value=0.17 Score=55.39 Aligned_cols=31 Identities=29% Similarity=0.338 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|+..|..|+++ |++|+++|+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 489999999999999999999 9999999974
No 315
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=90.19 E-value=0.22 Score=54.89 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|+..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 218 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGI-GLDTTVMMRSI 218 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCceEEEEcCc
Confidence 699999999999999999999 99999999874
No 316
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=90.16 E-value=0.21 Score=55.67 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|.|||+|..|...|..|+++ |++|+|+|+..
T Consensus 56 kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLA-GIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECcH
Confidence 699999999999999999999 99999999864
No 317
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=90.12 E-value=0.26 Score=49.63 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=32.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++++...
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI-CSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCCCC
Confidence 3799999999999999999999 9999999998654
No 318
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.07 E-value=0.24 Score=52.01 Aligned_cols=33 Identities=27% Similarity=0.363 Sum_probs=30.6
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
+..|.|||+|..|...|..|+++ |++|+|++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 44799999999999999999999 9999999985
No 319
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.99 E-value=0.2 Score=55.20 Aligned_cols=32 Identities=16% Similarity=0.294 Sum_probs=30.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|.+|+++|..|+++ |++|++.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 699999999999999999999 99999999864
No 320
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.92 E-value=0.24 Score=51.69 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|+ + |++|++++|+.
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 6999999999999999999 8 99999999864
No 321
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=89.87 E-value=0.18 Score=55.19 Aligned_cols=34 Identities=9% Similarity=0.215 Sum_probs=30.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-|+|||.|.+|+++|..|+++ |++|++.|.....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMTP 40 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSSC
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCCc
Confidence 589999999999999999999 9999999986544
No 322
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.83 E-value=0.26 Score=50.51 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|-+|..+|..|++. |.+|+|++|.
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~ 151 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSL-DCAVTITNRT 151 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCEEEEEECC
Confidence 699999999999999999999 9999999886
No 323
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.77 E-value=0.27 Score=54.32 Aligned_cols=35 Identities=6% Similarity=0.048 Sum_probs=31.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCc-EEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLK-VLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~K-VLVLEKG~~~ 469 (720)
-.|||||||..|+-+|..|++. |.+ |+||+|....
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCcc
Confidence 3799999999999999999999 885 9999998543
No 324
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.69 E-value=0.26 Score=51.60 Aligned_cols=30 Identities=37% Similarity=0.638 Sum_probs=28.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |++|+++ +.
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 699999999999999999999 9999999 54
No 325
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.58 E-value=0.28 Score=47.50 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=29.0
Q ss_pred cEEEEC-CcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVG-ASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIG-SGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.||| +|..|...|..|+++ |++|++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 489999 999999999999999 9999999986
No 326
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.57 E-value=0.26 Score=51.71 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|.|||+|..|...|..|+ + |++|+|+|+..
T Consensus 14 ~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 14 KVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 7999999999999999999 8 99999999853
No 327
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.57 E-value=0.26 Score=54.74 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
..+.|||.|..||.+|..||++ |++|+.+|..
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did 53 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVN 53 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECSC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEEECC
Confidence 4899999999999999999999 9999999963
No 328
>4gwq_H DNA-directed RNA polymerase II subunit RPB1; binding sites, mediator complex, models, molecular, phosphor protein structure, tertiary; 4.50A {Saccharomyces cerevisiae}
Probab=89.52 E-value=0.24 Score=36.14 Aligned_cols=32 Identities=50% Similarity=0.854 Sum_probs=0.0
Q ss_pred cCCCCC-CCCCCCCCCCCCCCCCCCC-CCCCC-CCCCCCC
Q psy14408 172 YSPLSP-YNPRSLFSSQNPLSPLSPL-NANSP-YNPRNQI 208 (720)
Q Consensus 172 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 208 (720)
|+|+|| |+|+|+. -||+||. +++|| |+|+++.
T Consensus 1 YsPtSP~ysPtSP~-----YsPtSP~YsPtSP~YsPtSP~ 35 (35)
T 4gwq_H 1 YSPTSPSYSPTSPS-----YSPTSPSYSPTSPSYSPTSPS 35 (35)
T ss_dssp -----CCSSSCCCC-----CCSSSSCSCCCCCCCC-----
T ss_pred CCCCCCCcCCCCCC-----cCCCCCCcCCCCCCCCCCCCC
No 329
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.49 E-value=0.27 Score=51.44 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|+++ |+ +|+|+|+..
T Consensus 6 kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 699999999999999999999 98 999999864
No 330
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.46 E-value=0.28 Score=53.76 Aligned_cols=37 Identities=27% Similarity=0.404 Sum_probs=33.2
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
...+..|||+|+|.+|..+|..|... |. +|+|+|+.+
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 34567999999999999999999999 98 999999974
No 331
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=89.43 E-value=0.3 Score=55.31 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=31.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.+||||||..|+-.|..+++. |.+|+|+++....
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~~~L 258 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSL-GYDVTVAVRSIVL 258 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TCCEEEEESSCSS
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCeEEEecccccc
Confidence 799999999999999999999 9999999986443
No 332
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.40 E-value=0.27 Score=52.70 Aligned_cols=32 Identities=34% Similarity=0.305 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-.|.|||+|..|.+.|..|+++ |++|++++|.
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCC
Confidence 3799999999999999999999 9999999985
No 333
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=89.40 E-value=0.29 Score=53.73 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=31.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
...|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 45899999999999999999988 99999999874
No 334
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.34 E-value=0.12 Score=47.30 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|..|..+|..|++. |++|+|+++.
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~ 53 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYP-QYKVTVAGRN 53 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTT-TCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 799999999999999999998 9999999986
No 335
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.32 E-value=0.3 Score=50.00 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|..|...|..|+++ |++|++.++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 589999999999999999999 99999999864
No 336
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.29 E-value=0.29 Score=51.89 Aligned_cols=32 Identities=16% Similarity=0.269 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
.|+|||+|..|.++|..|++. |+ +|+|+|+..
T Consensus 11 kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 11 KVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 699999999999999999999 98 999999864
No 337
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.26 E-value=0.32 Score=47.97 Aligned_cols=32 Identities=25% Similarity=0.260 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
..|.|||+|..|...|..|++. |++|++++|.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS-GFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 3699999999999999999999 9999999986
No 338
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.16 E-value=0.31 Score=49.00 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=30.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
..|.|||+|..|...|..|+++ |++|++.+|..
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 4799999999999999999999 99999999863
No 339
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=89.10 E-value=0.3 Score=53.69 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=31.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 193 ~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 193 SIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGDLI 226 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred cEEEECcCHHHHHHHHHHHHc-CCeEEEEECCCcc
Confidence 899999999999999999999 9999999998654
No 340
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.07 E-value=0.31 Score=53.27 Aligned_cols=38 Identities=18% Similarity=0.341 Sum_probs=33.4
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCCC
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 468 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~~ 468 (720)
...+..|||+|+|.+|..+|..|... |. +|+|+|+.+.
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~Gl 227 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKGI 227 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTEE
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCc
Confidence 34567999999999999999999999 98 7999999743
No 341
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.07 E-value=0.31 Score=50.92 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC--cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG~ 467 (720)
.|+|||+|..|.+.|..|+.. |+ +|+|+|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 489999999999999999999 98 999999863
No 342
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.02 E-value=0.3 Score=53.55 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|||||.|-.|..+|..|.++ |++|+|||+..
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 699999999999999999999 99999999863
No 343
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.98 E-value=0.32 Score=50.63 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|..|...|..|+++ |++|+++++..
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 699999999999999999999 99999999864
No 344
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.95 E-value=0.32 Score=50.30 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|..|...|..|+++ |++|+++++..
T Consensus 9 ~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 9 HVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 699999999999999999999 99999999853
No 345
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.93 E-value=0.19 Score=53.18 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 699999999999999999999 9999999985
No 346
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.88 E-value=0.35 Score=51.26 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
.|.|||+|..|.++|..||+. |+ +|+|+|+..
T Consensus 16 kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 799999999999999999999 98 999999864
No 347
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.83 E-value=0.31 Score=54.51 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|+++ |++|+|+|+..
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 699999999999999999999 99999999753
No 348
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.79 E-value=0.26 Score=50.33 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|+|||+|..|+-+|..|++. | +|+++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 3899999999999999999999 8 699999873
No 349
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.65 E-value=0.32 Score=53.00 Aligned_cols=34 Identities=12% Similarity=0.096 Sum_probs=31.1
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
...|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45899999999999999999998 99999999873
No 350
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.65 E-value=0.29 Score=48.38 Aligned_cols=32 Identities=28% Similarity=0.504 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEE-EccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLL-IEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLV-LEKG 466 (720)
..|.|||+|..|...|..|+++ |++|++ ++|.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-QIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-TCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCC
Confidence 4799999999999999999999 999999 8876
No 351
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=88.61 E-value=0.24 Score=49.44 Aligned_cols=33 Identities=18% Similarity=0.058 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
-.|+|||+|..|+-+|..|++. | +|++++++..
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhc-C-cEEEEECCCC
Confidence 3899999999999999999999 9 9999998754
No 352
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=88.55 E-value=0.32 Score=53.38 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|||+|..|+-+|..|++. |.+|+|+++..
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 220 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGL-GYEPTVMVRSI 220 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCC
Confidence 799999999999999999999 99999999853
No 353
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.48 E-value=0.39 Score=45.94 Aligned_cols=31 Identities=26% Similarity=0.283 Sum_probs=28.8
Q ss_pred EEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 436 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 436 VVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
|+|+|| |..|..+|.+|+++ |++|+++.|..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 899995 99999999999999 99999999863
No 354
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=88.47 E-value=0.36 Score=52.72 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=31.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
.|+|||+|..|+-+|..|++. |.+|+|+|++...
T Consensus 172 ~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 172 SILIAGGGYIAVEFANIFHGL-GVKTTLIYRGKEI 205 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCcc
Confidence 799999999999999999999 9999999998654
No 355
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.41 E-value=0.31 Score=49.84 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|..|...|..|+++ |++|++.+|..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 589999999999999999999 99999999864
No 356
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.27 E-value=0.3 Score=50.52 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
..|.|||.|..|...|..|+++ |++|+++|+...
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 4799999999999999999999 999999998754
No 357
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.20 E-value=0.36 Score=51.72 Aligned_cols=32 Identities=16% Similarity=0.324 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-.|+|||+|..|+.+|..|+.. |.+|+++|+.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM-GAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 4799999999999999999998 9999999986
No 358
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.12 E-value=0.2 Score=55.66 Aligned_cols=32 Identities=31% Similarity=0.534 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|||+|+|-.|...|..|+++ |+.|+|||+..
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 599999999999999999999 99999999853
No 359
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.12 E-value=0.42 Score=46.00 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=28.6
Q ss_pred EEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 436 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 436 VVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
|+|+|| |..|..+|.+|+++ |++|+++.|.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRR-GHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEEec
Confidence 899998 99999999999999 9999999986
No 360
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.09 E-value=0.34 Score=49.78 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||.|..|...|..|+++ |++|+++++.
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~ 35 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLV 35 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSS
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCC
Confidence 589999999999999999999 9999999986
No 361
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.08 E-value=0.4 Score=47.98 Aligned_cols=31 Identities=13% Similarity=0.393 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCC-CcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSS-LKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G-~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ | ++|+|++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-CCCeEEEECCC
Confidence 488999999999999999999 9 999999985
No 362
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.04 E-value=0.41 Score=48.42 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|++. |++|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 489999999999999999999 9999999985
No 363
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.03 E-value=0.38 Score=51.47 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-.|+|||+|.+|+.+|..|+.. |.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 3799999999999999999998 9999999986
No 364
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.99 E-value=0.44 Score=44.88 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=29.6
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|+|| |..|..+|.+|+++ |++|+++.|..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 5899998 99999999999999 99999999863
No 365
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=87.99 E-value=0.1 Score=53.64 Aligned_cols=8 Identities=38% Similarity=0.671 Sum_probs=0.0
Q ss_pred CCCCCCCC
Q psy14408 176 SPYNPRSL 183 (720)
Q Consensus 176 ~~~~~~~~ 183 (720)
.|+||..+
T Consensus 220 ~~~~~~~~ 227 (274)
T 2o8l_A 220 QPNNPDNP 227 (274)
T ss_dssp --------
T ss_pred CCCCCCCC
Confidence 34444443
No 366
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=87.95 E-value=0.36 Score=54.03 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=31.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~~ 468 (720)
.|.|||+|..|+..|..||+++|+ +|+++|+...
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 699999999999999999997689 9999998865
No 367
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.89 E-value=0.39 Score=52.35 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 4799999999999999999888 99999999863
No 368
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.81 E-value=0.4 Score=50.39 Aligned_cols=31 Identities=29% Similarity=0.344 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC--cEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG 466 (720)
.|.|||+|..|.+.|..|+++ |+ +|+++|+.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCC
Confidence 489999999999999999999 99 99999986
No 369
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.78 E-value=0.35 Score=51.54 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=30.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCC-------CcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSS-------LKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G-------~KVLVLEKG~~ 468 (720)
.|.|||+|..|.+.|..|+++ | ++|+++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 599999999999999999999 9 99999998754
No 370
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.76 E-value=0.36 Score=50.54 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|..|...|..|+++ |++|+++++..
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 799999999999999999999 99999999863
No 371
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.73 E-value=0.44 Score=49.32 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=30.0
Q ss_pred cEEEEC-CcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVG-ASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIG-SGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.||| +|..|.+.|..|++. |++|+++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 599999 999999999999999 99999999864
No 372
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.67 E-value=0.35 Score=53.47 Aligned_cols=31 Identities=16% Similarity=0.260 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
...|||.|..|+..|..||++ |++|+++|+.
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~ 43 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKH-GVDVLGVDIN 43 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSC
T ss_pred ccEEEeeCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 578999999999999999999 9999999974
No 373
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.62 E-value=0.46 Score=46.45 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=29.8
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|+|| |..|..+|.+|+++ |++|+++.|..
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNK-GHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhC-CCeEEEEECCh
Confidence 6999998 99999999999999 99999999863
No 374
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.62 E-value=0.42 Score=49.80 Aligned_cols=31 Identities=26% Similarity=0.368 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCC--CcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSS--LKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G--~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ | .+|+|+|+.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCC
Confidence 589999999999999999999 8 799999986
No 375
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.55 E-value=0.41 Score=48.02 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|+|+|..|..++.+|.++ |++|+++.|..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 599999999999999999999 99999999863
No 376
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.49 E-value=0.3 Score=52.52 Aligned_cols=29 Identities=10% Similarity=0.256 Sum_probs=27.5
Q ss_pred cEEEECCcHHHHHHHHHHHh-cCCCcEEEEc
Q psy14408 435 DIIIVGASAAGCVLANRLSE-VSSLKVLLIE 464 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAe-a~G~KVLVLE 464 (720)
.|.|||+|..|.+.|..|++ + |++|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 58999999999999999998 6 99999999
No 377
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.47 E-value=0.33 Score=49.81 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|-+|.++|..|++. |.+|+|+.|.
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~ 151 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQA-QQNIVLANRT 151 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHT-TCEEEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 699999999999999999999 9999999986
No 378
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.45 E-value=0.53 Score=47.38 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|+|+|..|..++..|.++ |++|+++.|..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 599999999999999999999 99999999874
No 379
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.36 E-value=0.48 Score=51.12 Aligned_cols=33 Identities=12% Similarity=0.229 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|+|||+|.+|+.+|..|... |.+|+++|+..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4899999999999999999888 99999999864
No 380
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.33 E-value=0.32 Score=51.01 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=30.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCC-------CcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSS-------LKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G-------~KVLVLEKG~~ 468 (720)
.|.|||+|..|.+.|..|+++ | ++|+++++...
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 699999999999999999999 9 99999998754
No 381
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.29 E-value=0.47 Score=52.92 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=30.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.+-+|.|||.|..|...|..|+++ |++|+|.+|.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 345899999999999999999999 9999999985
No 382
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.25 E-value=0.42 Score=48.70 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=30.6
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
....|+|||+|-.|..+|..|++. |. +++|+|...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 345899999999999999999999 97 688999763
No 383
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.13 E-value=0.51 Score=48.82 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|++. |++|+++++..
T Consensus 32 ~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 32 KIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred eEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 699999999999999999999 99999999863
No 384
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.11 E-value=0.43 Score=56.03 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |++|+|+|+.
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~ 344 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVN 344 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSS
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECC
Confidence 599999999999999999999 9999999975
No 385
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.01 E-value=0.52 Score=49.80 Aligned_cols=32 Identities=28% Similarity=0.488 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
.|.|||+|..|..+|..|+.. |+ +|+|+|...
T Consensus 6 kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 699999999999999999999 88 999999863
No 386
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.01 E-value=0.45 Score=49.90 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCC-CcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G-~KVLVLEKG~ 467 (720)
.|.|||.|..|...|..|+++ | ++|++.++..
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 699999999999999999999 9 9999999874
No 387
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.98 E-value=0.49 Score=49.37 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
.|+|||+|.+|..+|..|++. |. +|+|+.|.
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~ 174 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLST-AAERIDMANRT 174 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECSS
T ss_pred EEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 699999999999999999999 97 89999986
No 388
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=86.86 E-value=0.54 Score=49.16 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHHHhc-CCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea-~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|++. .|++|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 489999999999999999985 278999999874
No 389
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=86.78 E-value=0.65 Score=46.39 Aligned_cols=33 Identities=12% Similarity=0.263 Sum_probs=30.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCC----CcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSS----LKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G----~KVLVLEKG~~ 468 (720)
.|.|||+|..|...|..|+++ | ++|+|++|...
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSKK 42 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSCC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCcc
Confidence 699999999999999999999 9 79999998753
No 390
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.77 E-value=0.52 Score=48.14 Aligned_cols=31 Identities=19% Similarity=0.417 Sum_probs=29.4
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+ |..|...|..|+++ |++|+++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 6999999 99999999999999 9999999985
No 391
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.75 E-value=0.55 Score=47.65 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC--cEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG 466 (720)
.|.|||+|..|...|..|++. |+ +|+++|+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCC
Confidence 489999999999999999998 98 89999985
No 392
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=86.74 E-value=0.48 Score=49.44 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
-.|.|||.|..|...|..|+++ |+ +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 3699999999999999999999 99 99999995
No 393
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=86.72 E-value=0.43 Score=52.17 Aligned_cols=36 Identities=19% Similarity=0.321 Sum_probs=31.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++..|.+|+|+|++...
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 389999999999999999988548999999998654
No 394
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=86.69 E-value=0.55 Score=48.79 Aligned_cols=33 Identities=24% Similarity=0.453 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|.|||.|..|...|..|+++ |++|++.+|..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3799999999999999999999 99999999863
No 395
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=86.67 E-value=0.5 Score=53.12 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
--|+|+|+|..|..+|..|++. |.+|+|+|+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQA-GARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 3699999999999999999999 9999999975
No 396
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.62 E-value=0.6 Score=48.45 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=30.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-.|+|||+|-+|.++|..|++. |.+|+|+.|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ-GLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999874
No 397
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=86.58 E-value=0.47 Score=48.41 Aligned_cols=31 Identities=10% Similarity=0.263 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|++. |++|+++++.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 699999999999999999999 9999999985
No 398
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.50 E-value=0.28 Score=48.53 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|||||+|-.|..+|..|.+. |+ |+|+|+..
T Consensus 11 ~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 699999999999999999998 99 99999863
No 399
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=86.49 E-value=1.2 Score=41.57 Aligned_cols=60 Identities=23% Similarity=0.138 Sum_probs=41.4
Q ss_pred HHHHHHHhcCCCeEEEcCeEEEEEEEccCCcEEEEEEEecCCcEEEEEcCcEEEEccCCcchHHHHHHcCCC
Q psy14408 638 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 709 (720)
Q Consensus 638 a~L~~Aa~e~aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt~G~e~tIkAkK~VVVAAGa~~Sp~LLl~SGIg 709 (720)
.++.+.+ ++.|++++.+ +|++|..+ ++. +.+...+| +++++ .||+|+|... .++...|+.
T Consensus 60 ~~l~~~~-~~~gv~v~~~-~v~~i~~~-~~~---~~v~~~~g---~i~ad-~vI~A~G~~~--~~~~~~g~~ 119 (180)
T 2ywl_A 60 RRLEAHA-RRYGAEVRPG-VVKGVRDM-GGV---FEVETEEG---VEKAE-RLLLCTHKDP--TLPSLLGLT 119 (180)
T ss_dssp HHHHHHH-HHTTCEEEEC-CCCEEEEC-SSS---EEEECSSC---EEEEE-EEEECCTTCC--HHHHHHTCC
T ss_pred HHHHHHH-HHcCCEEEeC-EEEEEEEc-CCE---EEEEECCC---EEEEC-EEEECCCCCC--CccccCCCC
Confidence 4555555 5789999999 99999876 443 23333234 68897 5999999753 566777764
No 400
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.49 E-value=0.52 Score=48.04 Aligned_cols=32 Identities=13% Similarity=0.214 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|++. |++|+++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999999 99999999863
No 401
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.35 E-value=0.44 Score=49.16 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=28.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|+|+|-.|.++|..|+++ | +|+|++|.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 699999999999999999999 9 99999885
No 402
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.33 E-value=0.57 Score=49.20 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC--cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG~ 467 (720)
.|.|||.|..|.+.|..|+++ |+ +|+++|+..
T Consensus 35 kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 699999999999999999999 99 999999863
No 403
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.31 E-value=0.54 Score=50.68 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-.|+|||+|..|+.+|..|... |.+|+++|+.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM-GATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 4799999999999999999988 9999999975
No 404
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=86.27 E-value=0.61 Score=45.61 Aligned_cols=31 Identities=32% Similarity=0.474 Sum_probs=28.5
Q ss_pred EEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 436 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 436 VVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
|+|.|| |..|..+|.+|+++ |++|++++|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 789987 99999999999999 99999999864
No 405
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=86.25 E-value=0.55 Score=49.66 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
-.|.|||+|..|.++|..|+.. |+ .|+|+|+.
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 3699999999999999999999 99 99999986
No 406
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=86.12 E-value=0.59 Score=52.07 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
+|.|||+|..|...|..|+++ |++|+|++|.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 699999999999999999999 9999999985
No 407
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=85.97 E-value=0.43 Score=47.74 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=28.3
Q ss_pred cEEEECC-c-HHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-S-AAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-G-iAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|.|| | -.|..+|.+|+++ |++|++++|.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLE-GADVVISDYH 56 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEECCCCCchHHHHHHHHHHC-CCEEEEecCC
Confidence 5899998 7 5999999999999 9999999986
No 408
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=85.93 E-value=0.52 Score=55.25 Aligned_cols=31 Identities=16% Similarity=0.268 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |++|+|+|+.
T Consensus 316 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~ 346 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASK-GTPILMKDIN 346 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred EEEEECCChhhHHHHHHHHhC-CCEEEEEECC
Confidence 599999999999999999999 9999999975
No 409
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.91 E-value=0.6 Score=50.15 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
..|.|||.|..|...|..|+++ |++|+++++..
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999853
No 410
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.86 E-value=0.53 Score=57.19 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
.|||||||..|+-+|..|++. |. +|+||++..
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecC
Confidence 899999999999999999999 96 899999875
No 411
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.80 E-value=0.62 Score=50.05 Aligned_cols=36 Identities=19% Similarity=0.490 Sum_probs=31.1
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~~ 468 (720)
...-|+|||+|-.|+.+|..||+. |. +++|+|....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCEe
Confidence 345899999999999999999999 86 6889998643
No 412
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=85.79 E-value=0.64 Score=51.71 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
+|.|||.|..|...|..|+++ |++|+|++|..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 799999999999999999999 99999999853
No 413
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=85.77 E-value=0.62 Score=51.59 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhc---CCCcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEV---SSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea---~G~KVLVLEKG~~ 468 (720)
.|||||+|..|+-+|..|++. .|.+|+++++...
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~ 218 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 218 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc
Confidence 799999999999999999872 2789999998753
No 414
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=85.74 E-value=0.46 Score=55.45 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=30.6
Q ss_pred cEEEEC--CcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVG--ASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIG--SGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.||||| +|..|+-+|..|++. |.+|+|||++.
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 799999 999999999999999 99999999986
No 415
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.69 E-value=0.7 Score=51.85 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=31.2
Q ss_pred cccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 433 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 433 eyDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
...|.|||.|..|...|..|+++ |++|+|.+|..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35899999999999999999999 99999999863
No 416
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.68 E-value=0.62 Score=44.96 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=29.5
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|+|+|| |..|..++.+|+++ |++|.++.|..
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHP 38 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCc
Confidence 5999995 99999999999999 99999999973
No 417
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.66 E-value=0.67 Score=48.57 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
.|.|||+|..|..+|..|+.. |+ +|+|+|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 599999999999999999999 87 999999763
No 418
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=85.65 E-value=0.63 Score=47.69 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|.+|.++|..|++. |.+|+|++|.
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~ 161 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKE-GAKVFLWNRT 161 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHc-CCEEEEEECC
Confidence 699999999999999999999 9999999986
No 419
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=85.64 E-value=0.7 Score=44.66 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=27.9
Q ss_pred EEEEC-CcHHHHHHHHHHH-hcCCCcEEEEccC
Q psy14408 436 IIIVG-ASAAGCVLANRLS-EVSSLKVLLIEAG 466 (720)
Q Consensus 436 VVIIG-SGiAGLvAA~~LA-ea~G~KVLVLEKG 466 (720)
|+|+| +|..|..+|.+|+ ++ |++|+++.|.
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~ 39 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQ 39 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-CCEEEEEESS
T ss_pred EEEEeCCcHHHHHHHHHHHhcC-CceEEEEecC
Confidence 99999 5999999999999 78 9999999986
No 420
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=85.48 E-value=0.64 Score=48.88 Aligned_cols=33 Identities=24% Similarity=0.109 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHH-HHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVGASAAGCV-LANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGSGiAGLv-AA~~LAea~G~KVLVLEKG~~ 468 (720)
.|.|||.|.+|++ +|..|+++ |++|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCCC
Confidence 5899999999996 77888888 999999998743
No 421
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.45 E-value=0.73 Score=46.59 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=30.5
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
-|+|+|| |..|..++.+|+++ |++|+++.|...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVAS-GEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 6999999 99999999999999 999999998754
No 422
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.44 E-value=0.69 Score=46.48 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCc-EEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLK-VLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~K-VLVLEKG 466 (720)
.|.|||+|..|...|..|++. |++ |.++++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRK-GFRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCC
Confidence 699999999999999999999 999 8999975
No 423
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.41 E-value=0.57 Score=46.96 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=27.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEcc
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA 465 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEK 465 (720)
.|.|||+|..|...|..|++. |++|++.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-GVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-CCeEEEeCC
Confidence 378999999999999999999 999999877
No 424
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=85.38 E-value=0.65 Score=48.80 Aligned_cols=37 Identities=30% Similarity=0.469 Sum_probs=32.0
Q ss_pred CCCcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 430 SGDCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 430 ~d~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
.....-|+|||+|-.|..+|..||+. |. +++|+|...
T Consensus 33 kL~~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 33 KIRTFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GGGGCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred HHhCCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 44557999999999999999999999 85 788999763
No 425
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=85.30 E-value=0.69 Score=47.47 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=29.1
Q ss_pred cEEEEC-CcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVG-ASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIG-SGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|+| +|-+|..+|..|+++ |.+|+|++|.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 699999 999999999999999 9999999886
No 426
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.18 E-value=0.78 Score=50.92 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.+|.|||.|..|...|..|+++ |++|+|++|.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-GYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 4799999999999999999999 9999999985
No 427
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.08 E-value=0.62 Score=47.55 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|++. |++|+++++.
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~ 36 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKE-GVTVYAFDLM 36 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHT-TCEEEEECSS
T ss_pred EEEEECccHHHHHHHHHHHHC-CCeEEEEeCC
Confidence 699999999999999999999 9999999985
No 428
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.03 E-value=0.56 Score=50.94 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=27.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|+..|..|++ |++|+++|+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC--CCEEEEEECC
Confidence 48899999999999999997 8999999974
No 429
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.92 E-value=0.6 Score=51.70 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
--|+|||+|-.|...|..|.+. |.+|+|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 3699999999999999999999 9999999974
No 430
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=84.82 E-value=0.76 Score=47.80 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
--|+|||+|-+|.++|..|++. |. +|+|+.|.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECC
Confidence 3799999999999999999999 98 69999886
No 431
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=84.67 E-value=0.6 Score=52.00 Aligned_cols=32 Identities=16% Similarity=0.325 Sum_probs=28.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVS-SLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~-G~KVLVLEKG 466 (720)
.|.|||.|..|+..|..|+++. |++|+++|+.
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 6999999999999999999982 6899999974
No 432
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=84.57 E-value=0.8 Score=47.19 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=29.4
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|.|| |..|..+|.+|+++ |++|+++.|..
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r~~ 54 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQ-GHEILVIDNFA 54 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGG-TCEEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 5999997 99999999999999 99999999853
No 433
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.56 E-value=0.67 Score=54.65 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|.|||+|..|...|..+|.+ |++|+|+|..
T Consensus 318 ~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~ 348 (742)
T 3zwc_A 318 SVGVLGLGTMGRGIAISFARV-GISVVAVESD 348 (742)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSS
T ss_pred EEEEEcccHHHHHHHHHHHhC-CCchhcccch
Confidence 699999999999999999999 9999999975
No 434
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=84.46 E-value=0.77 Score=48.67 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
-.|+|+|+|-+|.++|..|++. |. +|+|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 3799999999999999999999 98 89999886
No 435
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=84.38 E-value=0.7 Score=44.61 Aligned_cols=31 Identities=26% Similarity=0.283 Sum_probs=28.9
Q ss_pred EEEEC-CcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 436 IIIVG-ASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 436 VVIIG-SGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
|+|+| +|..|..+|.+|+++ |++|+++.|..
T Consensus 3 ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTS-SCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECCc
Confidence 89999 799999999999999 99999999873
No 436
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=84.38 E-value=0.75 Score=49.72 Aligned_cols=32 Identities=13% Similarity=0.307 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
--|+|||+|-.|..+|..|.+. |.+|+|.|+.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 4699999999999999999999 9999999964
No 437
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=84.29 E-value=0.67 Score=48.18 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
-.|+|||+|-+|.++|..|++. |. +|+|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 3799999999999999999999 98 899999863
No 438
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=84.26 E-value=0.88 Score=46.07 Aligned_cols=31 Identities=29% Similarity=0.415 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|||+|-+|..+|..|++. |.+|+|++|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 799999999999999999998 9999999986
No 439
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.24 E-value=0.72 Score=49.32 Aligned_cols=35 Identities=14% Similarity=0.309 Sum_probs=30.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
....|+|||+|..|+.+|..|++. |. +++|+|...
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~ 70 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQ 70 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 456999999999999999999999 97 789998643
No 440
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=84.22 E-value=0.73 Score=50.96 Aligned_cols=31 Identities=16% Similarity=0.215 Sum_probs=28.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|..|+..|..||+ |++|+++|+..
T Consensus 38 kIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~ 68 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ--NHEVVALDIVQ 68 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT--TSEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHc--CCeEEEEecCH
Confidence 79999999999999999995 89999999753
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=84.09 E-value=0.83 Score=47.20 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-.|.|||.|..|..+|..|... |.+|+++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~ 187 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAAL-GAKVKVGARE 187 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 4799999999999999999988 9999999986
No 442
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=84.03 E-value=0.84 Score=46.68 Aligned_cols=31 Identities=16% Similarity=0.389 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
.|+|||+|-+|-++|..|++. |. +|+|++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 799999999999999999999 98 89999986
No 443
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=84.02 E-value=0.89 Score=44.46 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=28.2
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|.|| |..|..+|.+|+++ |++|++++|.
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~ 40 (244)
T 1cyd_A 9 RALVTGAGKGIGRDTVKALHAS-GAKVVAVTRT 40 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 4888887 89999999999999 9999999885
No 444
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=84.02 E-value=0.77 Score=49.23 Aligned_cols=35 Identities=17% Similarity=0.392 Sum_probs=30.8
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
....|+|||+|-.|..+|..||++ |. +++|+|...
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCc
Confidence 356899999999999999999999 86 688999763
No 445
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=83.98 E-value=0.95 Score=50.73 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=30.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-+|.|||.|..|...|..|+++ |++|++.++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3799999999999999999999 99999999864
No 446
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=83.96 E-value=0.86 Score=48.72 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|..|.+.|..|+++ |++|++.|+..
T Consensus 10 kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 699999999999999999999 99999999863
No 447
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.91 E-value=0.85 Score=47.22 Aligned_cols=32 Identities=13% Similarity=0.266 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-.|.|||+|-.|..+|..|... |.+|+++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~ 189 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL-GANVKVGARS 189 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCEEEEEECC
Confidence 3699999999999999999988 9999999986
No 448
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=83.87 E-value=0.92 Score=46.33 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=29.5
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|.|| |..|..+|.+|+++ |++|+++.|..
T Consensus 5 ~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~ 37 (345)
T 2z1m_A 5 RALITGIRGQDGAYLAKLLLEK-GYEVYGADRRS 37 (345)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCC
T ss_pred EEEEECCCChHHHHHHHHHHHC-CCEEEEEECCC
Confidence 4899998 99999999999999 99999999864
No 449
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.86 E-value=0.58 Score=47.90 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=28.6
Q ss_pred cEEEECCcHHHHHHHHHHHhcC----C-CcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVS----S-LKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~----G-~KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++. | ++|++++|.
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~ 46 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARG 46 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcH
Confidence 6999999999999999999862 6 899999983
No 450
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=83.86 E-value=0.91 Score=44.47 Aligned_cols=31 Identities=16% Similarity=0.311 Sum_probs=28.1
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|.|| |..|..+|.+|+++ |++|+++.|.
T Consensus 9 ~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~ 40 (244)
T 3d3w_A 9 RVLVTGAGKGIGRGTVQALHAT-GARVVAVSRT 40 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 4888887 89999999999999 9999999885
No 451
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=83.77 E-value=0.96 Score=46.61 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=30.5
Q ss_pred cccEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 433 CFDIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 433 eyDVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.--|+|.|| |..|..+|..|+++ |++|+++.|...
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCC
Confidence 346999998 99999999999999 999999998743
No 452
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.77 E-value=0.94 Score=45.25 Aligned_cols=31 Identities=10% Similarity=0.304 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC----cEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL----KVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~----KVLVLEKG 466 (720)
.|.|||+|..|...|..|+++ |+ +|++.+|.
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~-g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINK-NIVSSNQIICSDLN 38 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TSSCGGGEEEECSC
T ss_pred eEEEECccHHHHHHHHHHHhC-CCCCCCeEEEEeCC
Confidence 589999999999999999999 98 99999986
No 453
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=83.63 E-value=0.89 Score=47.04 Aligned_cols=32 Identities=9% Similarity=0.119 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
-.|+|||+|-+|.++|..|++. |. +|+|+.|.
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQA-GPSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 3799999999999999999999 95 89999885
No 454
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=83.57 E-value=0.82 Score=51.19 Aligned_cols=35 Identities=6% Similarity=0.260 Sum_probs=31.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|+|||+|..|+-+|..|++. |.+|+|++|....
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCcc
Confidence 3799999999999999999999 9999999997543
No 455
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=83.51 E-value=0.92 Score=47.43 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCC----CcEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSS----LKVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G----~KVLVLEKG~ 467 (720)
-.|.|||+|..|...|..|+++ | ++|+|++|..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-GVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-TSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCCCcceEEEECCCc
Confidence 3699999999999999999999 9 8999999875
No 456
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=83.39 E-value=0.99 Score=45.69 Aligned_cols=31 Identities=23% Similarity=0.504 Sum_probs=29.0
Q ss_pred EEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 436 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 436 VVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
|+|.|| |..|..+|.+|+++ |++|++++|..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 34 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLS 34 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEECCCS
T ss_pred EEEECCCChHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 899998 99999999999999 99999999864
No 457
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=83.35 E-value=0.74 Score=49.06 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=29.6
Q ss_pred cccEEEECCc-HHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 433 CFDIIIVGAS-AAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 433 eyDVVIIGSG-iAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.-.|+|||+| +.|-.+|..|++. |.+|+|++|.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 3489999999 6799999999999 9999999875
No 458
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=83.26 E-value=0.88 Score=46.21 Aligned_cols=31 Identities=10% Similarity=0.187 Sum_probs=27.5
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|+|| |..|..+|.+|+++ |++|+++.|.
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~ 35 (315)
T 2ydy_A 4 RVLVTGATGLLGRAVHKEFQQN-NWHAVGCGFR 35 (315)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEC--
T ss_pred eEEEECCCcHHHHHHHHHHHhC-CCeEEEEccC
Confidence 4899998 99999999999999 9999999975
No 459
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=83.24 E-value=0.85 Score=52.46 Aligned_cols=35 Identities=20% Similarity=0.531 Sum_probs=30.9
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
....|+|||+|-.|+.+|..||+. |. +++|+|...
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~ 361 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 361 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 346899999999999999999999 87 689999764
No 460
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.22 E-value=0.91 Score=47.66 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC--cEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG~ 467 (720)
.-|.|||+|..|..+|..|+.+ |+ .|+|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 3699999999999999999999 88 999999875
No 461
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=83.07 E-value=1 Score=47.66 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||.|..|.+.|..|++. |++|++.++..
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~-G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDS-GVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHC-cCEEEEEECCh
Confidence 699999999999999999999 99999999864
No 462
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.00 E-value=0.99 Score=50.74 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=32.1
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-.|||||+|-.|..+|..|.+. |+.|+|+|+....
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChHH
Confidence 3799999999999999999999 9999999998543
No 463
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=82.99 E-value=0.86 Score=46.00 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=28.8
Q ss_pred cEEEECC---cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA---SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS---GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|||.|| |-.|..+|.+|+++ |++|++++|..
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4899997 68999999999999 99999999874
No 464
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=82.78 E-value=0.94 Score=47.07 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
-.|+|||+|-+|.++|..|++. |. +|+|+.|.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~ 159 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQ-QPASITVTNRT 159 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESS
T ss_pred CEEEEECchHHHHHHHHHHHhc-CCCeEEEEECC
Confidence 3799999999999999999999 96 89999886
No 465
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=82.70 E-value=0.99 Score=45.09 Aligned_cols=31 Identities=23% Similarity=0.470 Sum_probs=27.2
Q ss_pred cEEEECC-cH--HHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SA--AGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-Gi--AGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|||.|| |. .|..+|.+|+++ |.+|+++.|.
T Consensus 9 ~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~ 42 (266)
T 3oig_A 9 NIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAG 42 (266)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCc
Confidence 4889997 45 899999999999 9999999876
No 466
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=82.64 E-value=0.95 Score=52.19 Aligned_cols=36 Identities=19% Similarity=0.490 Sum_probs=31.3
Q ss_pred CcccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCCC
Q psy14408 432 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 468 (720)
Q Consensus 432 ~eyDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~~ 468 (720)
...-|+|||+|-.|+.+|..||+. |. +++|+|....
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~V 361 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 361 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCCC
Confidence 456899999999999999999999 86 6889998743
No 467
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=82.58 E-value=1.2 Score=47.43 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG~ 467 (720)
..|.|||+|..|.++|..|+.. |+ .|+|+|...
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCc
Confidence 3799999999999999999998 88 999999864
No 468
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.56 E-value=0.96 Score=48.08 Aligned_cols=31 Identities=19% Similarity=0.419 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC--cEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG 466 (720)
.|.|||+|..|.++|..|+.. |+ .|+++|..
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 699999999999999999998 87 89999974
No 469
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=82.51 E-value=0.98 Score=49.67 Aligned_cols=50 Identities=10% Similarity=0.042 Sum_probs=36.4
Q ss_pred CCeEEEcCeEEEEEEEccCCcEEEEEEEec--------------CCcEEEEEcCcEEEEccCCcchH
Q psy14408 648 TNLYVLKRSKVTKVIINDQNVATGVEYVNS--------------KGETVRVTANKEVILTAGAIANA 700 (720)
Q Consensus 648 aGVkIi~gt~VtkIl~e~gGrAtGV~v~dt--------------~G~e~tIkAkK~VVVAAGa~~Sp 700 (720)
.|++|++++.|.+|..+ +++.+|++.+. +|+..++.|+ .||+|+|....+
T Consensus 265 ~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d-~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ-LVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS-EEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcC-EEEEccccccCC
Confidence 68999999999999743 56677776531 2444678997 599999965444
No 470
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=82.50 E-value=0.98 Score=47.31 Aligned_cols=32 Identities=19% Similarity=0.136 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCC--cEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG~ 467 (720)
.|.|||+|..|.++|..|++. |+ +|+|+|+..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 489999999999999999999 88 899999863
No 471
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=82.46 E-value=1.1 Score=47.13 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCCCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~~~ 469 (720)
-|+|||||.-|.-+|+.+.+. |++|+++|.....
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCCC
Confidence 489999999999999888888 9999999986543
No 472
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=82.39 E-value=0.85 Score=50.45 Aligned_cols=32 Identities=16% Similarity=0.371 Sum_probs=28.9
Q ss_pred cEEEECCcHHHHHHHHHHHhcC-CCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVS-SLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~-G~KVLVLEKG 466 (720)
.|.|||.|..|+..|..|+++. |++|+++|+.
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 6999999999999999999972 6899999974
No 473
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=82.27 E-value=1.1 Score=45.72 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=28.9
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|.|| |..|..+|.+|+++ |++|+++.|.
T Consensus 13 ~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~ 44 (342)
T 1y1p_A 13 LVLVTGANGFVASHVVEQLLEH-GYKVRGTARS 44 (342)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 5999998 99999999999999 9999999875
No 474
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=82.26 E-value=1.2 Score=43.48 Aligned_cols=33 Identities=33% Similarity=0.444 Sum_probs=29.5
Q ss_pred cEEEEC-CcHHHHHHHHHHHhcCCC--cEEEEccCCC
Q psy14408 435 DIIIVG-ASAAGCVLANRLSEVSSL--KVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIG-SGiAGLvAA~~LAea~G~--KVLVLEKG~~ 468 (720)
-|+|.| +|..|..+|.+|+++ |+ +|+++.|...
T Consensus 20 ~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 20 SVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKL 55 (242)
T ss_dssp EEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCC
T ss_pred eEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCCC
Confidence 589999 599999999999999 99 9999998743
No 475
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=82.16 E-value=1.1 Score=47.19 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC--cEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG~ 467 (720)
..|+|||+|..|.++|..|+.. |+ .|+++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 4899999999999999999998 87 899999863
No 476
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=82.13 E-value=0.91 Score=47.37 Aligned_cols=32 Identities=9% Similarity=0.186 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
-.|+|||+|-+|-++|..|++. |. +|+|+.|.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt 155 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRN 155 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESC
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 3799999999999999999999 98 89999886
No 477
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=82.03 E-value=0.98 Score=45.21 Aligned_cols=32 Identities=22% Similarity=0.382 Sum_probs=28.6
Q ss_pred cEEEECC---cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA---SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS---GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|.|| |..|..+|.+|+++ |++|++++|..
T Consensus 10 ~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~ 44 (261)
T 2wyu_A 10 KALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAE 44 (261)
T ss_dssp EEEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESCG
T ss_pred EEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 4899997 58999999999999 99999998863
No 478
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=81.98 E-value=1.3 Score=43.11 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=28.6
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
-|+|.|| |..|..+|.+|+++ |++|++++|...
T Consensus 4 ~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~ 37 (242)
T 1uay_A 4 SALVTGGASGLGRAAALALKAR-GYRVVVLDLRRE 37 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCC
T ss_pred EEEEeCCCChHHHHHHHHHHHC-CCEEEEEccCcc
Confidence 3788875 78899999999999 999999998754
No 479
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=81.98 E-value=0.98 Score=45.16 Aligned_cols=31 Identities=13% Similarity=0.296 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||+|..|...|..|++. |++|.++++.
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~-g~~v~~~~~~ 35 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQT-PHELIISGSS 35 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTS-SCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEECCC
Confidence 699999999999999999998 9999999985
No 480
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=81.97 E-value=1.2 Score=43.73 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=26.8
Q ss_pred EEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 436 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 436 VVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
|+|.|| |..|..+|.+|+++ |++|++++|.
T Consensus 5 vlItGasggiG~~~a~~l~~~-G~~V~~~~r~ 35 (250)
T 2cfc_A 5 AIVTGASSGNGLAIATRFLAR-GDRVAALDLS 35 (250)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 788875 78899999999999 9999999986
No 481
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=81.88 E-value=1.4 Score=45.24 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC---cEEEEccCC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL---KVLLIEAGG 467 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~---KVLVLEKG~ 467 (720)
..|.|||+|..|.+.|..|+++ |+ +|+|.|+..
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCH
Confidence 3699999999999999999999 98 999999864
No 482
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=81.84 E-value=1.1 Score=47.95 Aligned_cols=32 Identities=28% Similarity=0.303 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC--cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~--KVLVLEKG 466 (720)
.-|.|||+|..|.++|..|+.. |+ .|+|+|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-DLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECC
Confidence 3799999999999999999999 87 89999974
No 483
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=81.82 E-value=1.2 Score=43.96 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=27.3
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|.|| |..|..+|.+|+++ |++|++++|.
T Consensus 15 ~vlItGasggiG~~la~~l~~~-G~~V~~~~r~ 46 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEA-GARVIIADLD 46 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence 4788875 78899999999999 9999999986
No 484
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=81.81 E-value=1.3 Score=44.08 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=28.9
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
-|||.|| |-.|..+|.+|+++ |++|++++|...
T Consensus 24 ~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~ 57 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSK-SWNTISIDFREN 57 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 4888886 67899999999999 999999998754
No 485
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=81.75 E-value=1.1 Score=47.41 Aligned_cols=32 Identities=13% Similarity=0.301 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
-.|+|||+|-+|.++|..|++. |. +|+|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 3799999999999999999999 98 79999886
No 486
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=81.72 E-value=1.1 Score=48.64 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHHHhcCCC-cEEEEccC
Q psy14408 434 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 466 (720)
Q Consensus 434 yDVVIIGSGiAGLvAA~~LAea~G~-KVLVLEKG 466 (720)
-.|+|||+|-.|..+|..|... |. +|++++|.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~-G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-CCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 3699999999999999999998 98 89999986
No 487
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=81.68 E-value=1.1 Score=45.33 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=29.6
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|+|| |..|..+|..|+++ |++|+++.|..
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~ 38 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDL-GHPTFLLVRES 38 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhC-CCCEEEEECCc
Confidence 4999997 99999999999999 99999999874
No 488
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=81.66 E-value=1.2 Score=44.95 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=29.3
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|+|.|| |..|...+.+|.++ |++|++|-|..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~-G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNAR-GHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 3899998 99999999999999 99999998864
No 489
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=81.53 E-value=0.9 Score=51.09 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=28.2
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|+|+|||-+|.++|..|++. |.+|+|+.|.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~-G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEK-GAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 699999999999999999999 9999999885
No 490
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=81.42 E-value=1.1 Score=46.05 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=28.0
Q ss_pred cEEEECCc---HHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGAS---AAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSG---iAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|||.||+ -.|..+|.+|+++ |.+|+++++.
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~ 65 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLS 65 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCC
Confidence 58899985 7899999999999 9999999986
No 491
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=81.38 E-value=1.1 Score=45.25 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=28.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
.|.|||+|..|...|..|++ |++|+++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR--RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT--TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC--CCeEEEEeCCH
Confidence 48999999999999999997 89999999863
No 492
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=81.24 E-value=0.4 Score=48.83 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGSGiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
.|.|||.|..|.+.|..|+++ |++|+++++.
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~~ 38 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSV-GHYVTVLHAP 38 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHT-TCEEEECSSG
T ss_pred EEEEEeeCHHHHHHHHHHHHC-CCEEEEecCH
Confidence 699999999999999999999 9999999874
No 493
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.23 E-value=1.3 Score=43.79 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=27.4
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|.|| |-.|..+|.+|+++ |++|++++|.
T Consensus 11 ~vlITGas~giG~~~a~~l~~~-G~~V~~~~r~ 42 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALARE-GAAVVVADIN 42 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEECCCChHHHHHHHHHHHC-CCEEEEEcCC
Confidence 4788886 67799999999999 9999999985
No 494
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=81.19 E-value=0.94 Score=52.37 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=30.7
Q ss_pred cEEEEC--CcHHHHHHHHHHHhcCCCcEEEEccCCC
Q psy14408 435 DIIIVG--ASAAGCVLANRLSEVSSLKVLLIEAGGD 468 (720)
Q Consensus 435 DVVIIG--SGiAGLvAA~~LAea~G~KVLVLEKG~~ 468 (720)
.|+||| +|..|+-+|..|++. |.+|+|+++...
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~~ 559 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGAQ 559 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhC-CCeeEEEecccc
Confidence 699999 999999999999999 999999998753
No 495
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=81.07 E-value=0.94 Score=44.49 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=29.1
Q ss_pred cEEEEC-CcHHHHHHHHHHHhcCC-CcEEEEccCC
Q psy14408 435 DIIIVG-ASAAGCVLANRLSEVSS-LKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIG-SGiAGLvAA~~LAea~G-~KVLVLEKG~ 467 (720)
-|+|+| +|..|..+|.+|+++ | ++|+++.|..
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~ 58 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADK-QTIKQTLFARQP 58 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSG
T ss_pred EEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcCh
Confidence 599999 599999999999999 9 8999999873
No 496
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=80.96 E-value=0.99 Score=45.22 Aligned_cols=32 Identities=9% Similarity=0.185 Sum_probs=28.4
Q ss_pred cEEEECC---cHHHHHHHHHHHhcCCCcEEEEccCC
Q psy14408 435 DIIIVGA---SAAGCVLANRLSEVSSLKVLLIEAGG 467 (720)
Q Consensus 435 DVVIIGS---GiAGLvAA~~LAea~G~KVLVLEKG~ 467 (720)
-|||.|| |..|..+|.+|+++ |++|++++|..
T Consensus 11 ~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~ 45 (265)
T 1qsg_A 11 RILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND 45 (265)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESST
T ss_pred EEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcH
Confidence 3888897 58999999999999 99999999874
No 497
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=80.95 E-value=1.3 Score=43.43 Aligned_cols=31 Identities=19% Similarity=0.359 Sum_probs=27.0
Q ss_pred cEEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 435 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 435 DVVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
-|+|.|| |..|..+|.+|+++ |++|++++|.
T Consensus 13 ~vlITGasggiG~~la~~l~~~-G~~V~~~~r~ 44 (254)
T 2wsb_A 13 CAAVTGAGSGIGLEICRAFAAS-GARLILIDRE 44 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 3777775 78899999999999 9999999986
No 498
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=80.89 E-value=1.1 Score=44.17 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=0.0
Q ss_pred EEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 436 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 436 VVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
|||.|| |-.|..+|.+|+++ |++|++++|.
T Consensus 17 vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~ 47 (247)
T 3i1j_A 17 ILVTGAARGIGAAAARAYAAH-GASVVLLGRT 47 (247)
T ss_dssp EEESSTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEeCCCChHHHHHHHHHHHC-CCEEEEEecC
No 499
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=80.87 E-value=1.4 Score=44.02 Aligned_cols=30 Identities=23% Similarity=0.358 Sum_probs=0.0
Q ss_pred EEEECC-cHHHHHHHHHHHhcCCCcEEEEccC
Q psy14408 436 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 466 (720)
Q Consensus 436 VVIIGS-GiAGLvAA~~LAea~G~KVLVLEKG 466 (720)
|||.|| |-.|..+|.+|+++ |.+|++++|.
T Consensus 15 vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~ 45 (252)
T 3f1l_A 15 ILVTGASDGIGREAAMTYARY-GATVILLGRN 45 (252)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred EEEeCCCChHHHHHHHHHHHC-CCEEEEEeCC
No 500
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=80.71 E-value=0.77 Score=46.63 Aligned_cols=28 Identities=14% Similarity=0.251 Sum_probs=0.0
Q ss_pred EEEECCcHHHHHHHHHHHhcCCCcEEEEc
Q psy14408 436 IIIVGASAAGCVLANRLSEVSSLKVLLIE 464 (720)
Q Consensus 436 VVIIGSGiAGLvAA~~LAea~G~KVLVLE 464 (720)
|.|||+|..|...|..|++. |++|++++
T Consensus 6 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~ 33 (295)
T 1yb4_A 6 LGFIGLGIMGSPMAINLARA-GHQLHVTT 33 (295)
T ss_dssp EEECCCSTTHHHHHHHHHHT-TCEEEECC
T ss_pred EEEEccCHHHHHHHHHHHhC-CCEEEEEc
Done!