RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14408
(720 letters)
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 168 bits (425), Expect = 1e-46
Identities = 82/310 (26%), Positives = 123/310 (39%), Gaps = 21/310 (6%)
Query: 426 PYVKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHS---RIPGMSSVL 482
P SG D II G G A RL+E ++ VL+IE+G +
Sbjct: 10 PKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDI 69
Query: 483 SLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL- 541
S DHAY L N I +G GLGGS+ V + R +++ +
Sbjct: 70 FGSSVDHAYETVE-----LATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVF 124
Query: 542 GYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVG--------LFKNKENNIIR 593
G GW +D Y +++E R+ + A H + + I
Sbjct: 125 GNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPIV 184
Query: 594 EIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVL 653
+ ++ ++ G P KD + +R AA +L P +R NL VL
Sbjct: 185 KALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNY-QRPNLQVL 243
Query: 654 KRSKVTKVIINDQN---VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 710
V KV+++ A GVE+ KG T V A EV+L AG+ + +L SGIG
Sbjct: 244 TGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGM 303
Query: 711 KAHLDEVKIP 720
K+ L+ + I
Sbjct: 304 KSILEPLGID 313
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 166 bits (420), Expect = 6e-46
Identities = 84/310 (27%), Positives = 132/310 (42%), Gaps = 22/310 (7%)
Query: 426 PYVKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSVL 482
P +G +D II G G +A +L+E +KVL+IE G + P +
Sbjct: 17 PSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQI 76
Query: 483 SLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-L 541
+ D YL P + N I AGKGLGGS+ + + R +++ K
Sbjct: 77 FGTTVDQNYLTVP------LINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVF 130
Query: 542 GYNGWGYDETLKYFVKSEDYRSV-------IYNESKAVHGTQGYLPVGLFKN-KENNIIR 593
G GW +D +Y K+E R+ ++ + HGT G + G N + + I
Sbjct: 131 GMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIM 190
Query: 594 EIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVL 653
+ + LG P +D + + + +R AA A+L P +R+NL +L
Sbjct: 191 KALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPN-YQRSNLEIL 249
Query: 654 KRSKVTKVIINDQ---NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 710
V KV+ A GV + +K V A EV+L AG+ + +L SGIG
Sbjct: 250 TGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGL 309
Query: 711 KAHLDEVKIP 720
K+ LD+ +
Sbjct: 310 KSVLDQANVT 319
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 133 bits (335), Expect = 1e-34
Identities = 40/307 (13%), Positives = 81/307 (26%), Gaps = 27/307 (8%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 493
+D++IVG+ GC A L + KV + + G + + + ++
Sbjct: 5 YDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVN 63
Query: 494 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK----------LGY 543
L + + L +S + + R S ++ + +G
Sbjct: 64 VIQ--GQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGG 121
Query: 544 NGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFK-NKENNIIREIFETSAQE 602
+ F + + K + F+ S +
Sbjct: 122 MSTHWTCATPRFDREQRPL----LVKDDADADDAEWDRLYTKAESYFQTGTDQFKESIRH 177
Query: 603 LGYPCPKDMN---DRYVDVGFAELPGMTRYGLRFSAADAYLTPI-----AGKRTNLYVLK 654
R + + +S+A+ +
Sbjct: 178 NLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFP 237
Query: 655 RSKVTKVIINDQN-VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAH 713
+V+ N N + + +LTAGA+ N QLL+ SG G
Sbjct: 238 AVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGR 297
Query: 714 LDEVKIP 720
+ P
Sbjct: 298 PNPTNPP 304
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 130 bits (327), Expect = 1e-33
Identities = 59/292 (20%), Positives = 98/292 (33%), Gaps = 23/292 (7%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD---TPIHSRIPGMSSVLSLSEFDHA 490
+D IIVGA G + A+RLSE + KVLL+E GG + + ++ L++FD
Sbjct: 3 YDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIP 61
Query: 491 YLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDE 550
L E + L G N + +F+ +
Sbjct: 62 GLFESLFTDSNPFWWCKDITVFAGCLVGGGTSVN--GALYWYPNDGDFSSSVGWPSSWTN 119
Query: 551 TLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKD 610
Y K + T G + N++ ++ + Q D
Sbjct: 120 HAPYTSKLSSRLPSTDH-----PSTDGQRY----LEQSFNVVSQLLKG--QGYNQATIND 168
Query: 611 MNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVAT 670
+ V + + A A R N V+ V+ + +
Sbjct: 169 NPNYKDHVFGY--SAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVR-NGSQIL 225
Query: 671 GVEYVNS---KGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI 719
GV+ + + VT VIL+AGA +++L SGIGP + V+
Sbjct: 226 GVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQS 277
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 126 bits (317), Expect = 3e-32
Identities = 52/313 (16%), Positives = 96/313 (30%), Gaps = 51/313 (16%)
Query: 428 VKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIP----------- 476
+ GD +++G+ G V A RL++ + + ++E G
Sbjct: 2 LADGDRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDK 60
Query: 477 --------GMSSVLSLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQ 528
V + F + R + IK+ G+G+GG S V +
Sbjct: 61 RSMWLADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAV 120
Query: 529 RGTSYDYENFAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKE 588
+E + Y+ KYF ++ V + F++ E
Sbjct: 121 TPKRNYFEEILPSVDSNEMYN---KYFPRANTGLGV------------NNIDQAWFESTE 165
Query: 589 NNIIREIFETSAQELGYPC------------PKDMNDRYVDVGFAELPGMTRYGLRFSAA 636
+AQ G+ K+ + G + S
Sbjct: 166 WYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLD 225
Query: 637 DAYLTPIAGKRTNLYVLKRSKVTKVII-NDQNVATGVEYVNSKGETV--RVTANKEVILT 693
YL A L + +VTKV + +E ++ +G V +V V
Sbjct: 226 KTYLAQ-AAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFA 284
Query: 694 AGAIANAQLLLLS 706
AG++ ++LL+
Sbjct: 285 AGSVGTSKLLVSM 297
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 124 bits (312), Expect = 1e-31
Identities = 65/289 (22%), Positives = 104/289 (35%), Gaps = 34/289 (11%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 493
+D +IVG +GC LA LSE KVL++E G + + + + +
Sbjct: 27 YDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKT 84
Query: 494 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 553
+F I G+ LGG+S + +Y R + Y W D +
Sbjct: 85 PVERFVS----EDGIDNVRGRVLGGTSIINAGVYARANTSIYSASG----VDWDMDLVNQ 136
Query: 554 YFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMND 613
+ ED + + + + +T+ E G +
Sbjct: 137 TYEWVEDT---------------------IVYKPNSQSWQSVTKTAFLEAGVHPNHGFSL 175
Query: 614 RYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVE 673
+ + G R AAD L + V + ATGV
Sbjct: 176 DHEEGTRITGSTFDNKGTR-HAADELLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVI 234
Query: 674 YVNSKGETVRVT--ANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIP 720
Y +S G + + EVI++AG I QLLLLSG+GP+++L + IP
Sbjct: 235 YRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIP 283
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 120 bits (301), Expect = 3e-30
Identities = 47/297 (15%), Positives = 101/297 (34%), Gaps = 30/297 (10%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD----TPIHSRIPGMSSVLSLSEFDHA 490
+++G V A RL E + ++ L++E G P + GM + S +
Sbjct: 4 PAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKN 62
Query: 491 YLAEPSQFAGL----------------GVRNARIKITAGKGLGGSSAVQNILYQRGTSYD 534
P V ++ + G+G+GG S V +
Sbjct: 63 RTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSY 122
Query: 535 YENFAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNK-ENNIIR 593
+E + +YF ++ V + ++K T+ Y + + + +
Sbjct: 123 FEEI---LPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDTEWYKFARVSREQAGKAGLG 179
Query: 594 EIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVL 653
+F + + GY ++ A + S YL A + +
Sbjct: 180 TVFVPNVYDFGYM-QREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAA-ALGTGKVTIQ 237
Query: 654 KRSKVTKVII-NDQNVATGVEYVNSKGETV--RVTANKEVILTAGAIANAQLLLLSG 707
+V + D A VE ++ G+ + + + + + L AG++ + +LL+ +
Sbjct: 238 TLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 294
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 53.0 bits (126), Expect = 4e-08
Identities = 43/289 (14%), Positives = 94/289 (32%), Gaps = 31/289 (10%)
Query: 402 YDWQRLEK---ERYNIYRSVI--YPPDMTPYVKSGDCFDIIIVGASAAGCVLANRLSEVS 456
YD + + R + Y DM Y + D+++VGA +AG A +S+
Sbjct: 1 YDLNAFTFDPIKESIVSREMTRRYMTDMITYAE----TDVVVVGAGSAGLSAAYEISKNP 56
Query: 457 SLKVLLIEAGGDTPIHSRIPG-MSSVLSLSEFDHAYLAE---PSQFAGLGVRNARIKITA 512
+++V +IE + + G + S + + + H +L E V +
Sbjct: 57 NVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFT 116
Query: 513 GKGLGGSSAVQNILYQRGTSYDYENFAKLGYNG-WGYDETLKYFVKSEDYRSVIYNESKA 571
+ A N+ + + G + ++ E+K
Sbjct: 117 STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKI 176
Query: 572 VHGTQG----YLPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAEL-PGM 626
V + G + G+ + K +I + + + + E+ PGM
Sbjct: 177 VVSSCGHDGPFGATGVKRLKSIGMIDHVPGM------KALDMNTAEDAIVRLTREVVPGM 230
Query: 627 TRYGLRFSAADAY--LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVE 673
G+ + D + P G ++ K ++ + + ++
Sbjct: 231 IVTGMEVAEIDGAPRMGPTFGA----MMISGQKAGQLALKALGLPNAID 275
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 48.5 bits (114), Expect = 8e-07
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPG 477
+D+I++G +G + A +E VLL++ G I G
Sbjct: 3 YDVIVIGGGPSGLMAAIGAAE-EGANVLLLDKGNKLGRKLAISG 45
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 48.3 bits (113), Expect = 2e-06
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDH 489
+D+I++G C+L+ LS KVL I+ G ++ ++LS+
Sbjct: 6 YDVIVLGTGITECILSGLLSV-DGKKVLHIDK------QDHYGGEAASVTLSQLYE 54
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 47.5 bits (111), Expect = 3e-06
Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 7/128 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 493
+D+I++G C+L+ +S + KVL ++ + G SS ++ E +
Sbjct: 7 YDVIVLGTGLTECILSGIMSV-NGKKVLHMDR------NPYYGGESSSITPLEELYKRFQ 59
Query: 494 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 553
R + ++ + Y +F + + +
Sbjct: 60 LLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIY 119
Query: 554 YFVKSEDY 561
+E
Sbjct: 120 KVPSTETE 127
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 47.1 bits (110), Expect = 5e-06
Identities = 44/312 (14%), Positives = 89/312 (28%), Gaps = 36/312 (11%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA----GG------------DTPIHSRIPGM 478
++ +VG +G +A+ L +L+E+ GG + +S +
Sbjct: 2 NVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDRE 60
Query: 479 SSVLSL-SEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYEN 537
+ +L + + + A + + + + G
Sbjct: 61 PATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAG 120
Query: 538 FAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAV-HGTQGYLPVGLFKNKENNIIREIF 596
G DE+L F + AV G L ++ ++
Sbjct: 121 ELFSRRAPEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKME 180
Query: 597 ETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKR- 655
+ R + P ++ G + I +L
Sbjct: 181 REHRSLILGAIRAQKAQRQAALPAGTAPKLS--GALSTFDGGLQVLIDALAASLGDAAHV 238
Query: 656 -SKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL---------LL 705
++V + D + G ++ + V+L A A A A+LL L+
Sbjct: 239 GARVEGLAREDGGWRL---IIEEHGRRAELSVAQ-VVLAAPAHATAKLLRPLDDALAALV 294
Query: 706 SGIGPKAHLDEV 717
+GI HL+ V
Sbjct: 295 AGIYNLGHLERV 306
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 45.0 bits (105), Expect = 2e-05
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPG 477
D+++VG+ AG A ++ S KV+LIE ++++
Sbjct: 17 VDVVVVGSGGAGFSAAISATD-SGAKVILIEKEPVIGGNAKLAA 59
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 43.8 bits (102), Expect = 4e-05
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 410 ERYNIYRSVIYPPDMTPYVKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 469
++ I +++ P T +++VGA +AG + + + V+L++ +
Sbjct: 4 DQDKIQKAIAAGPSET--------TQVLVVGAGSAGFNASLAAKK-AGANVILVDKAPFS 54
Query: 470 PIHSRIPGMSSVLSLSEFDHAYLAEPS 496
+S I ++ A+ E
Sbjct: 55 GGNSMISAGGMNAVGTKQQTAHGVEDK 81
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 42.6 bits (99), Expect = 7e-05
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGM 478
+ II+GA AAG A +L++ V + + G + G
Sbjct: 5 SENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGKKIGRKILMSGG 48
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 43.0 bits (100), Expect = 7e-05
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 14/78 (17%)
Query: 401 PYDWQRLEKERYNIYRSVIYPPDMTPYVKSGDCFDIIIVGASAAGCVLANRLSEVSSLKV 460
P D + +++ ++ T D++I+G+ AG A + + KV
Sbjct: 4 PVDADKAAQDK-----AIAAGVKET--------TDVVIIGSGGAGLAAAVSARD-AGAKV 49
Query: 461 LLIEAGGDTPIHSRIPGM 478
+L+E ++++
Sbjct: 50 ILLEKEPIPGGNTKLAAG 67
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 288
Score = 42.0 bits (97), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSR 474
DI+I GA G A L + KV L+E+ +
Sbjct: 2 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGV 42
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 42.0 bits (97), Expect = 1e-04
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEA---GGDTPIHSRIP 476
+D+I++G + G A R + + KV L+E GG +P
Sbjct: 2 YDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSRLGGTCVNVGCVP 46
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 42.2 bits (98), Expect = 1e-04
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 422 PDMTPYVKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIP--GMS 479
P+ + D++I+G+ AAG LA RL++ +V+++ G T + G++
Sbjct: 4 PEHS--------CDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVTEGSTFYAQGGIA 53
Query: 480 SVLSLSEFDHAYLAEPSQFAGLGVRN 505
+V E + AG G+ +
Sbjct: 54 AVFD-ETDSIDSHVEDTLIAGAGICD 78
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 41.6 bits (96), Expect = 1e-04
Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 8/153 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG------GDTPIHSRIPGMSSVLSLSEF 487
FD+I++GA G V A + ++ LK LIE G +L +
Sbjct: 4 FDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDS 62
Query: 488 DHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWG 547
+ + F G+ + I + + L G + + + G G
Sbjct: 63 SYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNL-TGGVASLIKANGVTLFEGHG 121
Query: 548 YDETLKYFVKSEDYRSVIYNESKAVHGTQGYLP 580
K + S +++ V G P
Sbjct: 122 KLLAGKKVEVTAADGSSQVLDTENVILASGSKP 154
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 42.0 bits (97), Expect = 1e-04
Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAY 491
FD+I+VGA + G +L++ +K LL++A + G + ++ + +
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGRE 60
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living
yeast (Trichosporon cutaneum) [TaxId: 5554]}
Length = 360
Score = 41.6 bits (96), Expect = 2e-04
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 435 DIIIVGASAAGCVLANRLSEVSS----LKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHA 490
D++IVGA AG + A LSE LKV +I+ + + G+ +L +
Sbjct: 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCR-TLESLKNL 67
Query: 491 YLAEPSQFAGLGVRNARIKITAGKG 515
LA+ + + G
Sbjct: 68 GLADKILSEANDMSTIALYNPDENG 92
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 41.7 bits (96), Expect = 2e-04
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIP--GMSSVL 482
D +++G AG A + L +++ HS GM + L
Sbjct: 6 CDSLVIGGGLAGLRAAVATQQ-KGLSTIVLSLIPVKRSHSAAAQGGMQASL 55
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 40.6 bits (94), Expect = 3e-04
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 467
D++I+G AG V A + ++ +E G
Sbjct: 6 HDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKRG 38
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 40.3 bits (93), Expect = 4e-04
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG--GDTPIHSRIPGMSSVLSLSEFDHAY 491
+D I +G + G NR + K LIEA G T ++ + ++ A
Sbjct: 3 YDYIAIGGGSGGIASINRAAM-YGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAI 61
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 40.2 bits (93), Expect = 4e-04
Identities = 29/162 (17%), Positives = 51/162 (31%), Gaps = 10/162 (6%)
Query: 432 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEA----GGDTPIHSRIPGMSSVLSLSEF 487
D D++I+G G V A + ++ K IE GG IP +L
Sbjct: 2 DENDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKRGALGGTCLNVGCIPSK----ALLHS 56
Query: 488 DHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWG 547
H Y FA GV+ + ++I +G + L + +N
Sbjct: 57 SHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGK 116
Query: 548 YDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKEN 589
+ + V + + + + + T G G
Sbjct: 117 FVSPSEISVDTIEGENTVVKGKHIIIAT-GSDVKGRTPFTSG 157
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 40.6 bits (94), Expect = 4e-04
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIP--GMSSVLSLSEFDH 489
FD +++GA AG A ++S+ S L+ T H+ G++ L + D+
Sbjct: 8 FDAVVIGAGGAGMRAALQISQ-SGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDN 64
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia
coli [TaxId: 562]}
Length = 311
Score = 40.7 bits (94), Expect = 4e-04
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTPIHSRIP--GMSSVLS 483
D+ IVGA AG A ++ + K+ LI H+ G ++V
Sbjct: 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQ 58
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus
sp. [TaxId: 1409]}
Length = 276
Score = 40.5 bits (93), Expect = 4e-04
Identities = 7/33 (21%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466
++ +++G G +A L++ + L E+G
Sbjct: 5 YEAVVIGGGIIGSAIAYYLAK-ENKNTALFESG 36
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 39.9 bits (92), Expect = 5e-04
Identities = 17/151 (11%), Positives = 41/151 (27%), Gaps = 8/151 (5%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG--GDTPIHSRIPGMSSVLSLSEFDHAY 491
+D +++G + G A R +E + ++E+ G T ++ + + +
Sbjct: 4 YDYLVIGGGSGGLASARRAAE-LGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFM 62
Query: 492 LAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDET 551
A G + K A + L + ++ ++ G +
Sbjct: 63 ----HDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEI-IRGHAAFTS 117
Query: 552 LKYFVKSEDYRSVIYNESKAVHGTQGYLPVG 582
+ G P
Sbjct: 118 DPKPTIEVSGKKYTAPHILIATGGMPSTPHE 148
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 40.3 bits (93), Expect = 6e-04
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEV---SSLKVLLIEAGGDTPIHSRIPGMS 479
DI+I+G +GC A + LKV L+E + G+S
Sbjct: 22 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLS 70
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 39.5 bits (91), Expect = 7e-04
Identities = 20/119 (16%), Positives = 38/119 (31%), Gaps = 11/119 (9%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEA----GGDTPIHSRIPGMSSVLSLSEFDH 489
+D++++G G A ++ LKV ++E GG IP + +
Sbjct: 7 YDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYKTLGGVCLNVGCIPSKA-----LLHNA 60
Query: 490 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGY 548
A + E A G++ ++ V + L + G G
Sbjct: 61 AVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDV-IQGDGQ 118
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 39.9 bits (92), Expect = 8e-04
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 410 ERYNIYRSVI--YPPDMTPYVKSGDCFDIIIVGASAAGCVLANRLSEVS-SLKVLLIEAG 466
+ R++ Y D+ + D+IIVGA ++G A +++ LKV +IE+
Sbjct: 29 RESTVSRAMTSRYFKDLDKFAV----SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 84
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 39.4 bits (91), Expect = 9e-04
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEA 465
+D IIVG+ G V AN L + + KVL+IE
Sbjct: 2 YDYIIVGSGLFGAVCANELKK-LNKKVLVIEK 32
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 38.8 bits (89), Expect = 0.001
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466
++I+G G V A R ++ + +L+E
Sbjct: 6 TTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ 37
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 39.5 bits (90), Expect = 0.001
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA----GG 467
+I+VGA +G A RLSE +L++EA GG
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 38
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 39.5 bits (91), Expect = 0.001
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSS-----LKVLLIEAG 466
D++IVGA AG A RL ++++ L+V L+E
Sbjct: 33 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 70
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 38.5 bits (89), Expect = 0.001
Identities = 35/242 (14%), Positives = 63/242 (26%), Gaps = 55/242 (22%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 493
+ ++IVGA +G A L++ ++V L+ D M +
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQ-KGVRVGLLTQSLDA------VMMPFL------------ 43
Query: 494 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNG-----WGY 548
GS + + + + AK G
Sbjct: 44 ----------------PPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRPLHLFQ 87
Query: 549 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 608
++ V E G + L VG F + + E L
Sbjct: 88 ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGR--LSEASY 145
Query: 609 KDMNDRYVDVGF---------AELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVT 659
D+ + +GF E P Y +R+ A P + + + +
Sbjct: 146 PDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLA----FHPEEWEEKTFRLKRLEGLY 201
Query: 660 KV 661
V
Sbjct: 202 AV 203
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 38.4 bits (88), Expect = 0.002
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPG 477
+ I+GA +G +L L + + + +++E + RI
Sbjct: 4 QVAIIGAGPSGLLLGQLLHK-AGIDNVILERQTPDYVLGRIRA 45
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 37.8 bits (86), Expect = 0.003
Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYL 492
FD+II+G + G A ++ KV++++ TP+ + + +++ +
Sbjct: 4 FDLIIIGGGSGGLAAAKEAAK-FDKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIPKKLM 61
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 37.8 bits (86), Expect = 0.003
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466
I+I+GA G LA+ L + +++ G
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 37.1 bits (85), Expect = 0.003
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466
+ ++VGA G V A R ++ KV ++E G
Sbjct: 4 TETLVVGAGPGGYVAAIRAAQ-LGQKVTIVEKG 35
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 37.0 bits (84), Expect = 0.005
Identities = 18/177 (10%), Positives = 38/177 (21%), Gaps = 4/177 (2%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLAE 494
I +VG S +G A L + + + V + E S V
Sbjct: 6 RIAVVGGSISGLTAALMLRD-AGVDVDVYER--SPQPLSGFGTGIVVQPELVHYLLEQGV 62
Query: 495 PSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKY 554
+ + GS + Y + G + + L
Sbjct: 63 ELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIY-GGLYELFGPERYHTSKCLVG 121
Query: 555 FVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDM 611
+ + + +++ G ++ D
Sbjct: 122 LSQDSETVQMRFSDGTKAEANWVIGADGGASVVRKRLLGIETVDRMVHGRVLLIGDA 178
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 36.6 bits (83), Expect = 0.008
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA----GG 467
D+++VG +G A L + S L V+++EA GG
Sbjct: 1 DVVVVGGGISGMAAAKLLHD-SGLNVVVLEARDRVGG 36
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 36.1 bits (82), Expect = 0.010
Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
Query: 422 PDMTPYVKSGDC-----FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 468
PD + + D +D I +G AAG + L + L+++
Sbjct: 26 PDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRA-MGGRQLIVDRWPF 76
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 35.2 bits (79), Expect = 0.015
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 436 IIIVGASAAGCVLANRLSEV-SSLKVLLIEAG 466
+++VG G A + S++V LIE
Sbjct: 5 VVVVGGGTGGATAAKYIKLADPSIEVTLIEPN 36
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 36.0 bits (81), Expect = 0.016
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
Query: 436 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEF 487
+ ++GA +G A +L L V + EA + G +S
Sbjct: 4 VAVIGAGVSGLAAAYKLKI-HGLNVTVFEA------EGKAGGKLRSVSQDGL 48
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 35.4 bits (80), Expect = 0.018
Identities = 6/39 (15%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHS 473
++++G+ G A L+ V ++ + S
Sbjct: 8 RVVVLGSGVIGLSSALILAR-KGYSVHILARDLPEDVSS 45
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 35.0 bits (79), Expect = 0.020
Identities = 8/41 (19%), Positives = 18/41 (43%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSR 474
FD++++GA + G A + + +V +I+
Sbjct: 4 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFF 44
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 34.9 bits (79), Expect = 0.021
Identities = 6/41 (14%), Positives = 17/41 (41%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSR 474
+D++++GA + G + + +V +I+
Sbjct: 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHY 44
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 35.3 bits (79), Expect = 0.026
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA----GG 467
+II+G+ +G A +L + V L+EA GG
Sbjct: 7 KVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRVGG 42
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 34.3 bits (77), Expect = 0.041
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 435 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 466
++IVGA AG A L+ + +V ++EA
Sbjct: 32 HVVIVGAGMAGLSAAYVLAG-AGHQVTVLEAS 62
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 33.2 bits (74), Expect = 0.049
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 436 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSR 474
++IVG G LA +LS+ + +V +I+
Sbjct: 3 VVIVGNGPGGFELAKQLSQ--TYEVTVIDKEPVPYYSKP 39
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 34.0 bits (77), Expect = 0.055
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG---GDTPIHSRIPGMSSVLSLSEFDHA 490
D+++VGA +G RL E V +IE G +R PG + E+ ++
Sbjct: 8 VDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYS 66
Query: 491 YLAEP 495
+ E
Sbjct: 67 FSEEV 71
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 33.1 bits (74), Expect = 0.084
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 435 DIIIVGASAAGCVLANRLSEV--SSLKVLLIEA---GGDTPIHSRIP 476
I+I+G AG A + + +V +I+ GG + +P
Sbjct: 3 RIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVP 49
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 32.8 bits (74), Expect = 0.11
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 436 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFD 488
I+IVGA +G V+ +L+E +V +I+ I G S SE +
Sbjct: 5 ILIVGAGFSGAVIGRQLAE-KGHQVHIIDQ------RDHIGGNSYDARDSETN 50
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 32.5 bits (72), Expect = 0.12
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Query: 436 IIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTPIHSRIPGMSSVLS--LSEFDHAYL 492
+I++G+S G L + ++ E G S GM L + + +
Sbjct: 3 VIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLS--AGMQLYLEGKVKDVNSVRY 60
Query: 493 AEPSQFAGLGVR 504
+ GV
Sbjct: 61 MTGEKMESRGVN 72
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 32.5 bits (73), Expect = 0.15
Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Query: 436 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSS 480
++++GA G A + E VL R ++
Sbjct: 3 VVVIGAGVIGLSTALCIHE-RYHSVLQPLDV--KVYADRFTPFTT 44
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 32.0 bits (71), Expect = 0.17
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 434 FDIIIVGASAAGCVLANRLSEVSSLKVLLIE 464
+D++IVG+ AG A + ++ L+
Sbjct: 2 YDVLIVGSGPAGAAAAIYSAR-KGIRTGLMG 31
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 347
Score = 32.3 bits (72), Expect = 0.19
Identities = 19/149 (12%), Positives = 31/149 (20%), Gaps = 15/149 (10%)
Query: 272 HSVLNPYNLDSILNPFNVKSPLSPENPASPFNPYNPEPSIFDSHNIYSFFSPHNPYSPFN 331
+ V S N ++ N + DS + + P +N
Sbjct: 26 YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYN 85
Query: 332 PYNIDSPFNSDNPDSPF--------RNYPQYSRYNPKNPESPFSPQNEDSIYNPENPNSP 383
S + + F + +Y
Sbjct: 86 LGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYG----KVQ 141
Query: 384 YNPFNENSLYHPGNPDSPYDWQRLEKERY 412
P E P P SPY +L
Sbjct: 142 EIPQKET---TPFYPRSPYGAAKLYAYWI 167
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 31.6 bits (70), Expect = 0.22
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 435 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDTPIHSRIP 476
+++G A A + +VL++ + P + R P
Sbjct: 6 PFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP-YMRPP 47
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 29.0 bits (63), Expect = 1.5
Identities = 8/43 (18%), Positives = 15/43 (34%)
Query: 436 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGM 478
I ++GA A A+ L+ + + + E S
Sbjct: 7 IALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIP 49
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli
[TaxId: 562]}
Length = 357
Score = 29.4 bits (65), Expect = 1.5
Identities = 22/149 (14%), Positives = 41/149 (27%), Gaps = 16/149 (10%)
Query: 272 HSVLNPYNLDSILNPFNVKSPLSPENPASPFNPYNPEPSIFDSHNIYSFFSPHNPYSPFN 331
+ V S N V + +P + + D+ N+ P +N
Sbjct: 26 YEVHGIKRRASSFNTERVDHIYQDPHTCNP-KFHLHYGDLSDTSNLTRILREVQPDEVYN 84
Query: 332 PYNIDSPFNS-DNPDSPFR-------NYPQYSRYNPKNPESPFSPQNEDSIYNPENPNSP 383
+ S ++P+ + R+ ++ F + +Y
Sbjct: 85 LGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELY----GLVQ 140
Query: 384 YNPFNENSLYHPGNPDSPYDWQRLEKERY 412
P E P P SPY +L
Sbjct: 141 EIPQKET---TPFYPRSPYAVAKLYAYWI 166
>d1nlna_ d.3.1.7 (A:) Human adenovirus 2 proteinase, adenain
{Mastadenovirus H2 [TaxId: 10515]}
Length = 203
Score = 28.2 bits (63), Expect = 3.2
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 344 PDSPFRNYPQYSRYNPKNPESPFSPQNEDSIYNPENPNSPYNPFNENSLY 393
P +P + P + SPQ + ++ N Y+ +S Y
Sbjct: 136 PQTPMDHNPTMNLITGVPNSMLNSPQVQPTLR--RNQEQLYSFLERHSPY 183
>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]}
Length = 476
Score = 28.3 bits (63), Expect = 3.4
Identities = 9/52 (17%), Positives = 14/52 (26%)
Query: 318 YSFFSPHNPYSPFNPYNIDSPFNSDNPDSPFRNYPQYSRYNPKNPESPFSPQ 369
+ + P PF+ Y+ D D Y S + P
Sbjct: 346 HHQIPVNAPKCPFHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPP 397
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 28.1 bits (61), Expect = 3.9
Identities = 15/137 (10%), Positives = 41/137 (29%), Gaps = 4/137 (2%)
Query: 258 VYNNPDSPLSINSPHSVLNPYNLDSILNPFNVKSPLSPENPASPFNPYNPEPSIFDSHNI 317
+ + + H ++P+N++ L + + + P+ +
Sbjct: 31 LIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQS 90
Query: 318 YSFFSPHNPYSPFNPYNIDSPFNSDNPDSPFRNYPQYSRYNPKNPESPF----SPQNEDS 373
+ S P + + + S + + +Y F PQ+E +
Sbjct: 91 HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT 150
Query: 374 IYNPENPNSPYNPFNEN 390
++P +P +
Sbjct: 151 PFHPRSPYAASKCAAHW 167
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 27.7 bits (60), Expect = 4.9
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 436 IIIVGASAAGCVLANRLS-EVSSLKVLLIEAG---GDTPIHSRIPG 477
I I+GA +G V A L E + +V L E G ++
Sbjct: 7 IAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLS 52
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog
zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}
Length = 320
Score = 27.0 bits (58), Expect = 7.9
Identities = 20/202 (9%), Positives = 51/202 (25%), Gaps = 4/202 (1%)
Query: 152 DSVFNPRNPDSPYYNQYQFLYSPLSPYNPRSLFSSQNPLSPLSPLNANSPYNPRNQISYY 211
D + + + L + N N + P ++++
Sbjct: 58 DIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNH----EFYNFSRPSLLSSRLNSA 113
Query: 212 NIENPKSPYNIHNPESPLYSDSPYYYRNLPLYNPVETELIDQYSTSVYNNPDSPLSINSP 271
+ ++ + Y SP L + + +I + S + +
Sbjct: 114 QRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHN 173
Query: 272 HSVLNPYNLDSILNPFNVKSPLSPENPASPFNPYNPEPSIFDSHNIYSFFSPHNPYSPFN 331
H++ + + + + ++ D H P P
Sbjct: 174 HNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCA 233
Query: 332 PYNIDSPFNSDNPDSPFRNYPQ 353
I +N + S R++
Sbjct: 234 ADPICLAWNHEAVLSVLRSHQS 255
>d1ziva1 d.3.1.3 (A:28-337) Calpain large subunit, catalytic domain
(domain II) {Human (Homo sapiens), calpain 9 [TaxId:
9606]}
Length = 310
Score = 26.7 bits (58), Expect = 9.4
Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
Query: 386 PFNENSLYHPGNPDSPYDWQRLEK--ERYNIYRSVIYPPDMTPYVKSGDCFDIIIVGASA 443
P + +SL++ P P+ W+R + + D + G+ D ++ A A
Sbjct: 22 PASNSSLFYSERPQIPFVWKRPGEIVKNPEFILGGATRTD----ICQGELGDCWLLAAIA 77
Query: 444 A 444
+
Sbjct: 78 S 78
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.134 0.402
Gapped
Lambda K H
0.267 0.0609 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,809,331
Number of extensions: 142789
Number of successful extensions: 440
Number of sequences better than 10.0: 1
Number of HSP's gapped: 419
Number of HSP's successfully gapped: 89
Length of query: 720
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 628
Effective length of database: 1,144,436
Effective search space: 718705808
Effective search space used: 718705808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (25.6 bits)