Query psy14413
Match_columns 711
No_of_seqs 645 out of 5022
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 19:13:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14413.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14413hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 100.0 9.8E-47 3.4E-51 420.6 27.0 214 375-589 262-478 (479)
2 3swz_A Steroid 17-alpha-hydrox 100.0 1.6E-44 5.6E-49 404.5 29.0 312 276-588 145-480 (494)
3 1r9o_A Cytochrome P450 2C9; mo 100.0 1.4E-44 4.7E-49 403.3 26.4 209 378-587 262-474 (477)
4 3e6i_A CYPIIE1, P450-J, cytoch 100.0 1.5E-44 5.2E-49 402.7 25.8 211 378-589 260-474 (476)
5 1po5_A Cytochrome P450 2B4; ox 100.0 1.5E-44 5.1E-49 402.9 25.1 208 379-587 262-473 (476)
6 2fdv_A Cytochrome P450 2A6; CY 100.0 1.7E-44 6E-49 402.4 25.2 208 378-586 261-472 (476)
7 3ld6_A Lanosterol 14-alpha dem 100.0 3.6E-45 1.2E-49 406.1 19.6 303 276-588 142-455 (461)
8 3czh_A Cytochrome P450 2R1; vi 100.0 4.8E-44 1.6E-48 399.3 28.3 208 378-587 266-476 (481)
9 3nxu_A Cytochrome P450 3A4; al 100.0 7.5E-44 2.6E-48 398.1 23.2 302 277-588 147-476 (485)
10 3pm0_A Cypib1, cytochrome P450 100.0 8.7E-44 3E-48 399.8 23.8 208 380-589 274-486 (507)
11 3s79_A Cytochrome P450 19A1; o 100.0 2.7E-43 9.1E-48 395.5 27.0 302 276-590 183-497 (503)
12 3qz1_A Steroid 21-hydroxylase; 100.0 1.3E-43 4.3E-48 397.4 23.4 203 380-588 274-485 (496)
13 2hi4_A Cytochrome P450 1A2; CY 100.0 1.6E-43 5.4E-48 396.6 21.7 206 379-586 276-487 (495)
14 2ve3_A Putative cytochrome P45 100.0 5.1E-43 1.7E-47 386.9 25.2 279 277-561 140-420 (444)
15 3dbg_A Putative cytochrome P45 100.0 2.1E-43 7.3E-48 392.6 21.9 300 276-586 150-461 (467)
16 3k9v_A 1,25-dihydroxyvitamin D 100.0 9.8E-43 3.3E-47 388.6 25.7 201 379-584 277-480 (482)
17 3n9y_A Cholesterol SIDE-chain 100.0 2.1E-42 7.1E-47 386.7 26.0 205 379-589 269-477 (487)
18 2cib_A Cytochrome P450 51; hem 100.0 3.6E-43 1.2E-47 389.4 17.9 305 277-587 133-449 (455)
19 3mdm_A Cholesterol 24-hydroxyl 100.0 1.8E-42 6.3E-47 383.8 21.2 202 378-586 236-441 (456)
20 3gw9_A Sterol 14alpha-demethyl 100.0 1.5E-41 5.1E-46 375.6 20.5 301 276-588 136-449 (450)
21 2ij2_A Cytochrome P450 BM3; mo 100.0 1.2E-41 4.3E-46 378.6 18.8 300 277-586 138-451 (470)
22 3i3k_A Lanosterol 14-alpha dem 100.0 2.4E-41 8.2E-46 375.4 19.8 278 276-561 142-430 (461)
23 3dax_A Cytochrome P450 7A1; ch 100.0 1.4E-40 4.7E-45 372.3 21.6 208 380-589 252-486 (491)
24 3b98_A Prostaglandin I2 syntha 100.0 2.1E-39 7.2E-44 361.1 21.9 221 364-588 234-470 (475)
25 3b6h_A Prostacyclin synthase; 100.0 2.8E-39 9.5E-44 362.4 18.3 206 380-588 258-489 (498)
26 3v8d_A Cholesterol 7-alpha-mon 100.0 8.3E-39 2.8E-43 357.9 19.1 206 379-586 251-483 (491)
27 2jjn_A Cytochrome P450 113A1; 100.0 1.6E-38 5.3E-43 347.2 20.6 271 277-587 132-407 (411)
28 2xkr_A CYP142, putative cytoch 100.0 2.5E-38 8.6E-43 344.1 21.0 271 277-586 122-394 (398)
29 3a4g_A Vitamin D hydroxylase; 100.0 2.2E-38 7.5E-43 345.7 20.0 241 276-560 133-376 (411)
30 4fb2_A P450CIN; heme, monooxyg 100.0 1.2E-38 4.2E-43 346.6 17.9 259 277-584 131-391 (398)
31 3nc3_A Cytochrome P450 CYPX; c 100.0 1.4E-38 4.7E-43 350.5 17.3 257 276-560 159-418 (441)
32 3buj_A CALO2; heme, iron, meta 100.0 6.1E-38 2.1E-42 341.0 21.8 243 277-560 126-371 (397)
33 1izo_A P450bsbeta, cytochrome 100.0 8.7E-38 3E-42 342.1 22.0 258 276-560 130-391 (417)
34 2wiy_A XPLA-heme, cytochrome P 100.0 5.4E-38 1.8E-42 340.8 20.0 249 276-560 125-374 (394)
35 2cd8_A Cytochrome P450 monooxy 100.0 3.7E-38 1.3E-42 346.7 17.4 240 277-559 161-402 (436)
36 3oft_A Cytochrome P450, CYP101 100.0 4E-38 1.4E-42 342.4 17.5 174 363-562 202-376 (396)
37 2z3t_A Cytochrome P450; monoxy 100.0 1E-37 3.4E-42 342.0 20.2 246 277-560 145-392 (425)
38 3ejb_B Biotin biosynthesis cyt 100.0 1.2E-37 4.1E-42 339.6 20.6 244 277-560 127-373 (404)
39 3mgx_A Putative P450 monooxyge 100.0 8.5E-38 2.9E-42 341.3 18.8 239 276-560 152-393 (415)
40 2zwu_A Camphor 5-monooxygenase 100.0 7.4E-38 2.5E-42 341.9 18.1 238 277-560 148-387 (415)
41 1n40_A P450 MT2, cytochrome P4 100.0 1.4E-37 4.8E-42 337.8 19.8 243 276-560 129-374 (396)
42 1cpt_A Cytochrome P450-TERP; o 100.0 5.4E-38 1.8E-42 344.8 16.5 170 363-559 235-405 (428)
43 1ued_A P450 OXYC, P450 monooxy 100.0 4E-38 1.4E-42 343.3 15.2 238 277-559 145-384 (406)
44 1s1f_A Putative cytochrome P45 100.0 1.7E-37 5.8E-42 338.3 19.1 239 277-560 141-382 (406)
45 3aba_A Cytochrome P450; oxidor 100.0 7.4E-38 2.5E-42 340.8 16.2 241 277-560 135-377 (403)
46 1q5d_A P450 epoxidase; cytochr 100.0 3.3E-37 1.1E-41 337.5 20.6 247 277-560 142-394 (419)
47 1jfb_A Nitric-oxide reductase 100.0 2.7E-37 9.4E-42 336.7 19.8 243 277-559 138-381 (404)
48 2uuq_A CYP130, cytochrome P450 100.0 5.8E-38 2E-42 342.8 14.2 241 277-558 143-388 (414)
49 1z8o_A 6-deoxyerythronolide B 100.0 2.1E-37 7.3E-42 337.4 18.6 242 277-560 137-380 (404)
50 1n97_A CYP175A1; electron tran 100.0 1.2E-37 4.1E-42 337.7 16.4 258 276-585 124-385 (389)
51 3tkt_A Cytochrome P450; aromat 100.0 1.1E-37 3.9E-42 344.2 15.9 171 363-560 257-428 (450)
52 2zbx_A Cytochrome P450-SU1; be 100.0 1.4E-37 5E-42 339.6 16.5 171 364-560 213-384 (412)
53 2y5n_A MYCG, P-450-like protei 100.0 1.7E-37 5.8E-42 339.2 16.8 242 277-560 151-395 (417)
54 3tyw_A Putative cytochrome P45 100.0 7E-37 2.4E-41 334.8 21.3 242 277-561 147-390 (417)
55 3p3o_A Cytochrome P450; monoox 100.0 3.1E-37 1.1E-41 337.3 18.4 174 362-561 221-395 (416)
56 2rfb_A Cytochrome P450; heme, 100.0 3.8E-37 1.3E-41 327.8 17.9 231 277-560 91-324 (343)
57 3r9b_A Cytochrome P450 164A2; 100.0 5.6E-37 1.9E-41 335.8 19.7 249 277-560 143-395 (418)
58 1odo_A Putative cytochrome P45 100.0 4.6E-37 1.6E-41 335.2 18.4 171 364-559 208-382 (408)
59 3b4x_A 367AA long hypothetical 100.0 8.6E-37 3E-41 328.1 20.2 235 276-560 110-346 (367)
60 1lfk_A OXYB, P450 monooxygenas 100.0 1.7E-37 5.7E-42 337.6 14.0 238 277-559 136-375 (398)
61 3lxh_A Cytochrome P450; heme, 100.0 3E-37 1E-41 338.1 16.0 172 363-562 224-396 (421)
62 2dkk_A Cytochrome P450; CYP158 100.0 1.3E-36 4.5E-41 331.6 20.5 239 277-560 144-385 (411)
63 3rwl_A Cytochrome P450 alkane 100.0 1.3E-36 4.5E-41 333.1 20.6 173 362-561 233-406 (426)
64 3awm_A Fatty acid alpha-hydrox 100.0 1.7E-36 5.8E-41 331.6 21.3 257 276-560 129-389 (415)
65 1gwi_A CYP154C1, cytochrome P4 100.0 2.2E-37 7.6E-42 337.9 14.0 171 364-559 211-383 (411)
66 2wm5_A CYP124, putative cytoch 100.0 1.7E-36 6E-41 333.1 20.6 244 277-559 167-414 (435)
67 2z36_A MOXA, cytochrome P450 t 100.0 4.7E-37 1.6E-41 335.4 16.0 171 364-560 214-385 (413)
68 3abb_A CYP105D6, cytochrome P4 100.0 7.4E-37 2.5E-41 333.6 17.3 237 277-559 142-381 (408)
69 3ivy_A Cytochrome P450 CYP125; 100.0 1.4E-36 4.9E-41 333.8 18.6 242 276-561 162-407 (433)
70 1io7_A Cytochrome P450 CYP119; 100.0 3.8E-36 1.3E-40 323.4 19.0 230 277-559 114-345 (368)
71 2xbk_A PIMD protein; epoxidati 100.0 3.3E-36 1.1E-40 327.4 17.7 156 380-560 225-382 (404)
72 3dsk_A Cytochrome P450 74A, ch 100.0 1.9E-35 6.3E-40 331.1 21.5 181 378-559 275-471 (495)
73 3dan_A Cytochrome P450 74A2; A 100.0 4.9E-36 1.7E-40 333.7 16.4 181 379-560 258-454 (473)
74 3tbg_A Cytochrome P450 2D6; mo 100.0 4.1E-36 1.4E-40 334.7 15.4 196 20-227 246-445 (479)
75 3oo3_A OXY protein; cytochrome 100.0 9.6E-36 3.3E-40 322.2 16.6 235 277-561 127-362 (384)
76 1r9o_A Cytochrome P450 2C9; mo 100.0 8.6E-36 2.9E-40 332.2 15.6 211 4-226 225-441 (477)
77 3czh_A Cytochrome P450 2R1; vi 100.0 1.1E-35 3.6E-40 331.8 16.1 211 4-226 229-445 (481)
78 1po5_A Cytochrome P450 2B4; ox 100.0 8.7E-36 3E-40 332.1 13.9 211 4-226 224-440 (476)
79 2fdv_A Cytochrome P450 2A6; CY 100.0 1.7E-35 5.8E-40 329.7 15.9 211 4-226 224-440 (476)
80 2ve3_A Putative cytochrome P45 100.0 1.6E-35 5.4E-40 326.9 14.4 208 4-226 205-414 (444)
81 3ld6_A Lanosterol 14-alpha dem 100.0 7.2E-36 2.5E-40 331.3 10.7 208 4-227 214-425 (461)
82 2hi4_A Cytochrome P450 1A2; CY 100.0 1.2E-35 4E-40 332.7 12.3 212 4-226 238-457 (495)
83 3e6i_A CYPIIE1, P450-J, cytoch 100.0 3.5E-35 1.2E-39 327.0 15.7 212 4-227 223-440 (476)
84 3swz_A Steroid 17-alpha-hydrox 100.0 5.5E-35 1.9E-39 327.1 14.7 212 5-227 224-448 (494)
85 3pm0_A Cypib1, cytochrome P450 100.0 5.1E-35 1.7E-39 328.4 12.4 212 5-227 231-454 (507)
86 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.3E-34 4.6E-39 322.8 14.4 198 7-226 251-453 (482)
87 4dnj_A Putative cytochrome P45 100.0 3E-34 1E-38 313.0 16.6 160 375-560 230-390 (412)
88 2cib_A Cytochrome P450 51; hem 100.0 6.7E-35 2.3E-39 322.9 11.5 208 4-226 203-417 (455)
89 3qz1_A Steroid 21-hydroxylase; 100.0 1E-34 3.5E-39 325.0 12.5 206 4-226 234-450 (496)
90 3dbg_A Putative cytochrome P45 100.0 8.3E-35 2.8E-39 323.3 10.0 208 3-226 224-433 (467)
91 3nxu_A Cytochrome P450 3A4; al 100.0 8.3E-35 2.8E-39 324.8 9.6 195 19-226 245-443 (485)
92 3mdm_A Cholesterol 24-hydroxyl 100.0 2.1E-34 7E-39 319.1 11.2 200 6-226 206-412 (456)
93 2ij2_A Cytochrome P450 BM3; mo 100.0 2.7E-34 9.1E-39 319.5 9.6 207 4-227 214-424 (470)
94 3n9y_A Cholesterol SIDE-chain 100.0 9.7E-34 3.3E-38 316.4 13.6 185 20-226 258-445 (487)
95 3i3k_A Lanosterol 14-alpha dem 100.0 4.9E-34 1.7E-38 316.6 10.7 208 4-227 214-425 (461)
96 3s79_A Cytochrome P450 19A1; o 100.0 2.7E-33 9.4E-38 314.0 12.9 200 4-226 253-460 (503)
97 3gw9_A Sterol 14alpha-demethyl 100.0 3.9E-33 1.3E-37 308.1 12.5 201 4-226 211-418 (450)
98 3dax_A Cytochrome P450 7A1; ch 100.0 6.1E-33 2.1E-37 310.2 10.7 193 18-227 234-451 (491)
99 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.5E-32 5.2E-37 293.3 13.3 147 388-560 214-361 (381)
100 3b98_A Prostaglandin I2 syntha 100.0 2.2E-32 7.5E-37 304.4 10.1 191 18-226 231-435 (475)
101 4dxy_A Cytochrome P450, CYP101 100.0 3.1E-31 1.1E-35 288.9 16.4 172 362-561 222-394 (417)
102 1jfb_A Nitric-oxide reductase 100.0 5.4E-31 1.8E-35 286.9 16.5 182 3-224 193-374 (404)
103 3nc3_A Cytochrome P450 CYPX; c 100.0 1.4E-31 4.7E-36 294.6 11.9 189 3-224 222-410 (441)
104 3b6h_A Prostacyclin synthase; 100.0 7.6E-32 2.6E-36 302.0 9.4 193 17-227 239-455 (498)
105 3oft_A Cytochrome P450, CYP101 100.0 3.3E-31 1.1E-35 287.8 14.0 182 3-226 187-369 (396)
106 2z3t_A Cytochrome P450; monoxy 100.0 3.1E-31 1.1E-35 290.5 13.2 180 5-227 209-389 (425)
107 1ued_A P450 OXYC, P450 monooxy 100.0 4.2E-31 1.4E-35 287.8 12.9 178 3-224 200-377 (406)
108 3a4g_A Vitamin D hydroxylase; 100.0 1E-30 3.5E-35 285.1 15.8 181 3-224 188-368 (411)
109 3aba_A Cytochrome P450; oxidor 100.0 8.9E-31 3E-35 284.9 14.7 180 3-224 190-369 (403)
110 2z36_A MOXA, cytochrome P450 t 100.0 9.2E-31 3.2E-35 285.6 14.8 181 3-225 198-378 (413)
111 4fb2_A P450CIN; heme, monooxyg 100.0 5.6E-31 1.9E-35 286.1 13.0 180 3-226 185-365 (398)
112 2jjn_A Cytochrome P450 113A1; 100.0 1.3E-30 4.4E-35 284.5 15.7 181 4-225 195-375 (411)
113 2y5n_A MYCG, P-450-like protei 100.0 1.2E-30 4.2E-35 284.9 15.4 180 3-224 207-387 (417)
114 3tyw_A Putative cytochrome P45 100.0 7.6E-31 2.6E-35 286.9 13.7 182 3-226 202-384 (417)
115 1cpt_A Cytochrome P450-TERP; o 100.0 8.7E-31 3E-35 287.4 13.9 179 4-225 221-399 (428)
116 2xkr_A CYP142, putative cytoch 100.0 1.1E-30 3.8E-35 283.8 14.6 178 4-224 184-361 (398)
117 2zbx_A Cytochrome P450-SU1; be 100.0 1.2E-30 4E-35 284.8 14.6 180 3-224 197-376 (412)
118 1s1f_A Putative cytochrome P45 100.0 1.5E-30 5.3E-35 283.3 15.0 178 3-224 196-374 (406)
119 3buj_A CALO2; heme, iron, meta 100.0 1E-30 3.5E-35 284.0 13.2 176 4-224 188-363 (397)
120 1z8o_A 6-deoxyerythronolide B 100.0 1.4E-30 4.8E-35 283.6 14.3 181 3-225 193-373 (404)
121 1lfk_A OXYB, P450 monooxygenas 100.0 6.4E-31 2.2E-35 285.6 11.5 178 3-224 191-368 (398)
122 1odo_A Putative cytochrome P45 100.0 1.2E-30 4.1E-35 284.4 13.6 183 3-224 192-375 (408)
123 3ejb_B Biotin biosynthesis cyt 100.0 1.7E-30 5.9E-35 282.9 14.7 177 4-224 189-365 (404)
124 2cd8_A Cytochrome P450 monooxy 100.0 1.7E-30 5.9E-35 285.5 14.6 181 3-224 215-395 (436)
125 1n40_A P450 MT2, cytochrome P4 100.0 2.1E-30 7.1E-35 281.4 14.9 168 20-224 199-366 (396)
126 1q5d_A P450 epoxidase; cytochr 100.0 3.1E-30 1E-34 282.2 15.3 179 4-224 207-386 (419)
127 2xbk_A PIMD protein; epoxidati 100.0 2.5E-30 8.6E-35 281.1 14.1 175 3-224 199-374 (404)
128 2wiy_A XPLA-heme, cytochrome P 100.0 2.5E-30 8.5E-35 280.4 14.0 180 4-225 188-367 (394)
129 1gwi_A CYP154C1, cytochrome P4 100.0 9.3E-31 3.2E-35 285.5 10.2 181 3-224 195-376 (411)
130 2uuq_A CYP130, cytochrome P450 100.0 9.4E-31 3.2E-35 285.6 9.9 181 3-224 201-382 (414)
131 3lxh_A Cytochrome P450; heme, 100.0 2.4E-30 8.2E-35 283.3 12.9 180 3-226 209-389 (421)
132 3abb_A CYP105D6, cytochrome P4 100.0 1.7E-30 5.7E-35 283.3 11.4 179 3-224 196-374 (408)
133 2dkk_A Cytochrome P450; CYP158 100.0 1.8E-30 6.2E-35 283.0 11.7 177 4-224 200-377 (411)
134 3p3o_A Cytochrome P450; monoox 100.0 6.3E-30 2.1E-34 279.4 15.9 181 3-225 207-387 (416)
135 3mgx_A Putative P450 monooxyge 100.0 2.1E-30 7.2E-35 282.7 11.7 175 3-224 211-385 (415)
136 3v8d_A Cholesterol 7-alpha-mon 100.0 1.6E-30 5.5E-35 290.7 10.7 194 18-228 234-452 (491)
137 3tkt_A Cytochrome P450; aromat 100.0 3.9E-30 1.3E-34 283.9 13.1 179 4-225 243-421 (450)
138 2wm5_A CYP124, putative cytoch 100.0 8.1E-30 2.8E-34 280.0 15.3 180 4-225 228-408 (435)
139 2zwu_A Camphor 5-monooxygenase 100.0 3.5E-30 1.2E-34 281.1 11.7 179 3-225 202-380 (415)
140 3r9b_A Cytochrome P450 164A2; 100.0 1.1E-29 3.9E-34 277.7 14.1 178 4-224 210-387 (418)
141 1izo_A P450bsbeta, cytochrome 100.0 6.2E-30 2.1E-34 279.7 11.4 190 3-226 191-386 (417)
142 3rwl_A Cytochrome P450 alkane 100.0 9E-30 3.1E-34 278.8 12.6 179 4-224 219-397 (426)
143 3b4x_A 367AA long hypothetical 100.0 1.1E-29 3.7E-34 272.7 12.8 170 4-224 169-338 (367)
144 3ivy_A Cytochrome P450 CYP125; 100.0 1.3E-29 4.4E-34 278.4 12.6 177 4-225 222-399 (433)
145 3dan_A Cytochrome P450 74A2; A 100.0 1.1E-29 3.8E-34 282.4 11.5 185 21-226 245-449 (473)
146 3dsk_A Cytochrome P450 74A, ch 100.0 4.9E-30 1.7E-34 287.0 7.3 176 39-226 276-467 (495)
147 3awm_A Fatty acid alpha-hydrox 100.0 1.3E-29 4.3E-34 277.1 8.9 188 4-226 191-384 (415)
148 2rfb_A Cytochrome P450; heme, 100.0 1E-28 3.5E-33 262.7 12.6 159 21-225 158-317 (343)
149 1io7_A Cytochrome P450 CYP119; 100.0 8.4E-29 2.9E-33 266.0 11.9 157 21-225 183-339 (368)
150 3oo3_A OXY protein; cytochrome 100.0 1.2E-28 4.2E-33 266.4 12.1 175 3-226 181-356 (384)
151 4dnj_A Putative cytochrome P45 100.0 2.8E-28 9.6E-33 265.8 13.5 162 22-224 221-382 (412)
152 1n97_A CYP175A1; electron tran 99.9 5.4E-29 1.9E-33 269.6 5.8 155 40-226 205-359 (389)
153 4dxy_A Cytochrome P450, CYP101 99.9 7.1E-26 2.4E-30 246.6 13.1 178 3-224 208-385 (417)
154 2yjn_B Erycii, DTDP-4-keto-6-d 99.9 7.4E-26 2.5E-30 241.6 6.1 142 48-226 214-356 (381)
155 2diu_A KIAA0430 protein; struc 86.9 1.1 3.7E-05 36.4 5.6 64 633-701 12-79 (96)
156 3lqv_A PRE-mRNA branch site pr 78.4 3.8 0.00013 34.2 6.2 69 624-700 2-79 (115)
157 2krb_A Eukaryotic translation 68.4 12 0.00041 28.7 6.4 64 633-698 4-78 (81)
158 2dnz_A Probable RNA-binding pr 67.9 11 0.00037 29.9 6.2 66 627-700 2-79 (95)
159 3ns6_A Eukaryotic translation 67.7 10 0.00034 30.7 6.0 71 627-699 3-86 (100)
160 2kxn_B Transformer-2 protein h 67.3 17 0.0006 31.0 7.8 67 626-700 42-120 (129)
161 2dhg_A TRNA selenocysteine ass 67.1 14 0.00049 29.8 7.0 68 625-700 4-84 (104)
162 1s79_A Lupus LA protein; RRM, 65.8 11 0.00039 30.8 6.0 62 631-700 12-83 (103)
163 1whx_A Hypothetical protein ri 62.1 11 0.00039 31.1 5.4 61 632-700 12-78 (111)
164 1iqt_A AUF1, heterogeneous nuc 60.2 9.1 0.00031 28.8 4.1 57 634-698 3-70 (75)
165 3bs9_A Nucleolysin TIA-1 isofo 58.4 6 0.0002 30.9 2.8 65 626-698 2-78 (87)
166 4fxv_A ELAV-like protein 1; RN 58.2 7 0.00024 31.7 3.3 58 633-698 22-91 (99)
167 4f25_A Polyadenylate-binding p 57.7 7.4 0.00025 32.5 3.5 59 632-698 7-75 (115)
168 1why_A Hypothetical protein ri 57.6 27 0.00094 27.7 6.9 66 626-699 13-86 (97)
169 2mss_A Protein (musashi1); RNA 56.2 12 0.00041 28.1 4.2 57 634-698 3-70 (75)
170 3beg_B Splicing factor, argini 54.4 15 0.00052 30.6 4.9 58 632-697 18-80 (115)
171 1x5u_A Splicing factor 3B subu 54.3 26 0.0009 28.2 6.3 64 629-700 14-89 (105)
172 3s8s_A Histone-lysine N-methyl 54.2 8.9 0.00031 31.8 3.3 64 629-700 5-80 (110)
173 3mdf_A Peptidyl-prolyl CIS-tra 54.1 16 0.00056 28.0 4.8 64 627-698 4-79 (85)
174 1p27_B RNA-binding protein 8A; 54.1 21 0.0007 29.0 5.6 59 633-699 26-96 (106)
175 1x5s_A Cold-inducible RNA-bind 54.0 32 0.0011 27.5 6.8 67 626-700 8-86 (102)
176 2d9p_A Polyadenylate-binding p 53.8 18 0.00062 29.1 5.2 69 624-700 9-87 (103)
177 2dgv_A HnRNP M, heterogeneous 53.0 25 0.00086 27.5 5.8 62 631-700 9-80 (92)
178 2dnp_A RNA-binding protein 14; 52.1 23 0.00079 27.6 5.4 65 626-698 5-73 (90)
179 2cq3_A RNA-binding protein 9; 52.0 19 0.00066 29.0 5.1 65 626-698 11-85 (103)
180 1oo0_B CG8781-PA, drosophila Y 51.9 17 0.00058 29.8 4.8 59 633-699 29-99 (110)
181 2hvz_A Splicing factor, argini 51.5 20 0.00069 28.7 5.1 58 634-699 4-68 (101)
182 1sjq_A Polypyrimidine tract-bi 51.5 28 0.00094 28.7 5.8 69 624-700 10-86 (105)
183 2ad9_A Polypyrimidine tract-bi 50.7 26 0.0009 29.5 5.7 64 629-700 30-101 (119)
184 3s7r_A Heterogeneous nuclear r 50.1 15 0.00052 28.5 4.0 62 628-697 9-81 (87)
185 2cqc_A Arginine/serine-rich sp 49.9 25 0.00084 27.7 5.3 67 624-698 9-87 (95)
186 3ex7_B RNA-binding protein 8A; 49.1 23 0.0008 29.7 5.3 61 632-700 24-96 (126)
187 3s6e_A RNA-binding protein 39; 49.0 16 0.00054 30.6 4.1 75 626-700 3-87 (114)
188 2a3j_A U1 small nuclear ribonu 48.9 52 0.0018 27.9 7.5 66 631-700 30-104 (127)
189 3p5t_L Cleavage and polyadenyl 48.4 12 0.00042 29.4 3.2 59 633-699 4-76 (90)
190 2wbr_A GW182, gawky, LD47780P; 48.3 19 0.00064 28.7 4.1 62 630-699 7-74 (89)
191 2div_A TRNA selenocysteine ass 48.2 19 0.00065 28.7 4.4 64 626-697 5-81 (99)
192 2e44_A Insulin-like growth fac 48.2 48 0.0017 26.0 6.9 61 631-699 16-85 (96)
193 2dnq_A RNA-binding protein 4B; 48.1 29 0.00099 27.1 5.4 66 627-700 5-74 (90)
194 1whw_A Hypothetical protein ri 48.1 17 0.00058 29.0 4.1 62 629-698 7-80 (99)
195 2i2y_A Fusion protein consists 47.9 33 0.0011 29.9 6.3 66 627-700 70-142 (150)
196 2do4_A Squamous cell carcinoma 47.9 25 0.00086 28.1 5.1 63 628-698 15-88 (100)
197 2dnm_A SRP46 splicing factor; 47.7 25 0.00087 28.2 5.1 62 631-700 14-87 (103)
198 3d2w_A TAR DNA-binding protein 47.4 22 0.00076 27.9 4.6 55 626-688 7-65 (89)
199 2cph_A RNA binding motif prote 45.5 49 0.0017 26.6 6.7 62 630-699 15-90 (107)
200 1rk8_A CG8781-PA, CG8781-PA pr 45.5 17 0.0006 32.4 4.1 60 633-700 75-146 (165)
201 2e5h_A Zinc finger CCHC-type a 45.2 38 0.0013 26.5 5.8 64 626-697 12-87 (94)
202 2jrs_A RNA-binding protein 39; 45.1 30 0.001 28.3 5.2 61 632-700 28-100 (108)
203 2dgx_A KIAA0430 protein; RRM d 45.0 23 0.00079 28.1 4.4 65 630-698 9-82 (96)
204 2dgs_A DAZ-associated protein 44.9 42 0.0014 26.6 6.1 64 629-700 9-83 (99)
205 1x4e_A RNA binding motif, sing 44.8 18 0.00062 27.9 3.6 63 627-697 2-76 (85)
206 2la6_A RNA-binding protein FUS 44.8 19 0.00064 28.8 3.8 65 626-698 9-93 (99)
207 1x4c_A Splicing factor, argini 44.8 42 0.0014 27.2 6.1 56 632-695 17-77 (108)
208 2ytc_A PRE-mRNA-splicing facto 44.6 54 0.0018 24.9 6.5 60 630-697 12-78 (85)
209 2x1f_A MRNA 3'-END-processing 44.3 23 0.00078 28.1 4.3 61 630-698 2-74 (96)
210 3ue2_A Poly(U)-binding-splicin 44.0 21 0.00071 30.1 4.1 69 629-700 19-103 (118)
211 2nlw_A Eukaryotic translation 43.6 31 0.0011 28.0 5.0 67 628-696 13-89 (105)
212 3md1_A Nuclear and cytoplasmic 43.6 18 0.00061 27.7 3.4 57 634-698 5-73 (83)
213 2dnh_A Bruno-like 5, RNA bindi 43.0 51 0.0017 26.4 6.3 63 629-699 14-90 (105)
214 1wex_A Hypothetical protein (r 42.6 52 0.0018 26.8 6.2 64 629-700 14-85 (104)
215 1x4a_A Splicing factor, argini 42.1 52 0.0018 26.6 6.3 63 629-699 21-92 (109)
216 2dh8_A DAZ-associated protein 41.3 31 0.0011 27.8 4.7 63 627-697 13-86 (105)
217 1nu4_A U1A RNA binding domain; 41.3 28 0.00095 27.5 4.3 65 630-698 8-81 (97)
218 2lea_A Serine/arginine-rich sp 41.2 44 0.0015 28.6 5.9 61 632-700 49-121 (135)
219 3ucg_A Polyadenylate-binding p 40.8 23 0.00078 27.5 3.7 58 633-698 9-77 (89)
220 3zzy_A Polypyrimidine tract-bi 40.7 25 0.00086 30.2 4.1 57 625-689 21-84 (130)
221 1p1t_A Cleavage stimulation fa 40.7 27 0.00092 28.0 4.2 60 632-699 10-81 (104)
222 2dgp_A Bruno-like 4, RNA bindi 40.1 51 0.0017 26.5 5.9 65 628-700 11-90 (106)
223 2fy1_A RNA-binding motif prote 40.1 29 0.00098 28.9 4.4 63 629-699 6-79 (116)
224 2kn4_A Immunoglobulin G-bindin 40.0 34 0.0012 30.0 5.2 66 626-699 66-143 (158)
225 4a8x_A RNA-binding protein wit 39.8 29 0.001 26.7 4.2 59 632-698 6-77 (88)
226 2pe8_A Splicing factor 45; RRM 38.9 15 0.00053 30.1 2.4 71 627-700 5-88 (105)
227 2rs2_A Musashi-1, RNA-binding 38.7 29 0.00098 28.4 4.1 62 628-697 23-95 (109)
228 2jvr_A Nucleolar protein 3; RN 38.5 20 0.00069 29.8 3.1 59 632-698 30-97 (111)
229 2cpj_A Non-POU domain-containi 38.4 36 0.0012 27.0 4.6 63 630-700 15-83 (99)
230 3ulh_A THO complex subunit 4; 38.1 28 0.00096 28.1 3.9 60 631-698 30-100 (107)
231 1x4g_A Nucleolysin TIAR; struc 37.8 39 0.0013 27.4 4.8 61 630-698 25-91 (109)
232 1sjr_A Polypyrimidine tract-bi 37.8 47 0.0016 29.8 5.5 57 626-690 40-103 (164)
233 2cpx_A Hypothetical protein FL 37.4 30 0.001 28.4 4.1 67 626-700 21-99 (115)
234 2ywk_A Putative RNA-binding pr 37.3 25 0.00084 27.7 3.4 62 629-698 15-87 (95)
235 2voo_A Lupus LA protein; RNA-b 36.7 29 0.001 32.0 4.2 60 633-700 112-181 (193)
236 2e5j_A Methenyltetrahydrofolat 36.6 76 0.0026 24.9 6.3 60 632-699 21-87 (97)
237 1wg5_A Heterogeneous nuclear r 36.2 61 0.0021 26.0 5.8 63 630-700 15-88 (104)
238 2ki2_A SS-DNA binding protein 36.2 24 0.00082 27.5 3.1 58 634-700 5-74 (90)
239 2cpz_A CUG triplet repeat RNA- 36.1 28 0.00097 28.6 3.7 60 631-698 26-97 (115)
240 1x4b_A Heterogeneous nuclear r 35.9 26 0.00088 29.0 3.4 60 631-698 28-98 (116)
241 3v4m_A Splicing factor U2AF 65 35.9 45 0.0015 27.2 4.8 72 630-701 5-92 (105)
242 2dgt_A RNA-binding protein 30; 35.7 61 0.0021 25.2 5.5 62 629-698 9-74 (92)
243 2cqi_A Nucleolysin TIAR; RNA r 35.5 60 0.002 25.9 5.6 62 629-698 14-85 (103)
244 1x4h_A RNA-binding protein 28; 35.0 85 0.0029 25.3 6.5 54 628-689 13-75 (111)
245 2cq1_A PTB-like protein L; RRM 34.9 49 0.0017 26.7 4.8 64 629-700 14-85 (101)
246 3r27_A HnRNP L, heterogeneous 34.8 72 0.0025 25.8 5.8 64 627-698 18-89 (100)
247 1x4f_A Matrin 3; structural ge 34.7 29 0.00098 28.9 3.4 65 628-700 23-96 (112)
248 1uaw_A Mouse-musashi-1; RNP-ty 34.7 16 0.00056 27.4 1.8 57 634-698 4-71 (77)
249 2dis_A Unnamed protein product 34.6 69 0.0023 25.8 5.9 60 631-698 9-84 (109)
250 2ku7_A MLL1 PHD3-CYP33 RRM chi 33.9 74 0.0025 26.9 6.2 64 626-697 59-134 (140)
251 2jvo_A Nucleolar protein 3; nu 33.8 34 0.0012 27.9 3.8 61 631-699 32-96 (108)
252 4f02_A Polyadenylate-binding p 32.6 34 0.0012 31.9 4.0 64 626-697 11-86 (213)
253 2qfj_A FBP-interacting repress 32.1 69 0.0024 29.4 6.2 59 632-698 30-100 (216)
254 2cpf_A RNA binding motif prote 32.0 64 0.0022 25.4 5.1 61 630-698 5-80 (98)
255 1x5p_A Negative elongation fac 31.7 86 0.0029 24.6 5.9 60 628-697 13-78 (97)
256 2dgo_A Cytotoxic granule-assoc 31.4 56 0.0019 26.7 4.8 63 627-697 12-86 (115)
257 2cq2_A Hypothetical protein LO 31.0 98 0.0034 25.7 6.1 57 626-690 21-82 (114)
258 2err_A Ataxin-2-binding protei 30.9 30 0.001 28.3 2.9 61 630-698 29-99 (109)
259 2kvi_A Nuclear polyadenylated 30.6 69 0.0024 25.2 5.1 62 631-700 11-77 (96)
260 2bz2_A Negative elongation fac 30.3 46 0.0016 27.9 4.1 65 626-700 35-105 (121)
261 2kt5_A RNA and export factor-b 30.2 59 0.002 27.1 4.8 59 632-698 37-106 (124)
262 1x4d_A Matrin 3; structural ge 29.9 64 0.0022 26.1 4.7 68 625-700 10-86 (102)
263 1wi8_A EIF-4B, eukaryotic tran 29.4 61 0.0021 25.9 4.6 66 625-699 10-87 (104)
264 2dit_A HIV TAT specific factor 29.4 64 0.0022 26.3 4.8 75 626-700 11-96 (112)
265 2f3j_A RNA and export factor b 29.1 79 0.0027 28.5 5.7 64 629-700 87-161 (177)
266 1x5t_A Splicing factor 3B subu 28.7 30 0.001 27.2 2.5 63 630-700 5-80 (96)
267 3tyt_A Heterogeneous nuclear r 28.6 45 0.0015 31.0 4.1 59 631-697 5-71 (205)
268 1u6f_A Tcubp1, RNA-binding pro 28.5 77 0.0026 26.9 5.4 59 631-697 43-113 (139)
269 2jwn_A Embryonic polyadenylate 28.2 59 0.002 27.0 4.4 59 632-698 38-107 (124)
270 2cqd_A RNA-binding region cont 28.1 1.3E+02 0.0045 24.4 6.7 62 629-698 16-88 (116)
271 2cjk_A Nuclear polyadenylated 28.1 65 0.0022 28.1 5.0 60 632-699 89-159 (167)
272 3q2s_C Cleavage and polyadenyl 28.1 44 0.0015 31.7 3.9 63 630-700 68-144 (229)
273 2e5i_A Heterogeneous nuclear r 27.9 81 0.0028 26.6 5.2 55 634-696 29-90 (124)
274 2cqb_A Peptidyl-prolyl CIS-tra 27.6 55 0.0019 26.0 4.0 65 626-698 8-84 (102)
275 2dgu_A Heterogeneous nuclear r 27.4 95 0.0033 24.7 5.5 59 631-697 12-74 (103)
276 2hzc_A Splicing factor U2AF 65 27.0 90 0.0031 23.7 5.1 61 629-697 5-81 (87)
277 3n9u_C Cleavage and polyadenyl 26.2 46 0.0016 29.4 3.5 63 630-700 55-131 (156)
278 3pgw_S U1-70K; protein-RNA com 25.7 64 0.0022 34.0 5.0 65 628-700 100-176 (437)
279 2cqg_A TDP-43, TAR DNA-binding 25.2 1.3E+02 0.0045 23.7 5.9 61 629-697 14-84 (103)
280 2la4_A Nuclear and cytoplasmic 25.0 85 0.0029 24.8 4.7 59 631-697 28-92 (101)
281 2khc_A Testis-specific RNP-typ 25.0 40 0.0014 27.8 2.7 58 632-697 42-111 (118)
282 1wf1_A RNA-binding protein RAL 25.0 89 0.003 25.2 4.9 62 629-698 26-92 (110)
283 2adc_A Polypyrimidine tract-bi 24.9 99 0.0034 28.9 5.9 59 632-698 36-102 (229)
284 2cq4_A RNA binding motif prote 24.8 60 0.0021 26.5 3.8 58 633-698 28-96 (114)
285 2cpy_A RNA-binding protein 12; 24.5 37 0.0013 27.9 2.4 65 626-698 11-86 (114)
286 2do0_A HnRNP M, heterogeneous 24.5 94 0.0032 25.2 5.0 60 631-698 16-86 (114)
287 2xnq_A Nuclear polyadenylated 23.6 1.3E+02 0.0043 23.7 5.4 60 631-698 23-87 (97)
288 3pgw_A U1-A; protein-RNA compl 23.5 1.1E+02 0.0036 29.7 6.0 59 632-698 209-275 (282)
289 2dng_A Eukaryotic translation 23.5 73 0.0025 25.3 4.0 66 625-699 10-86 (103)
290 2cjk_A Nuclear polyadenylated 23.5 61 0.0021 28.3 3.8 58 632-697 5-72 (167)
291 1x5o_A RNA binding motif, sing 23.3 1.1E+02 0.0038 24.7 5.2 61 629-697 24-95 (114)
292 2cq0_A Eukaryotic translation 23.3 52 0.0018 26.3 3.0 62 629-698 14-87 (103)
293 2cpi_A CCR4-NOT transcription 22.9 21 0.00073 29.3 0.5 61 630-698 15-93 (111)
294 2d9o_A DNAJ (HSP40) homolog, s 22.8 1.9E+02 0.0065 23.1 6.4 48 652-699 31-83 (100)
295 1b7f_A Protein (SXL-lethal pro 22.8 1.1E+02 0.0038 26.5 5.5 59 629-695 88-158 (168)
296 2cpd_A Apobec-1 stimulating pr 22.1 1.3E+02 0.0043 23.6 5.2 60 630-697 15-80 (99)
297 1wf0_A TDP-43, TAR DNA-binding 21.7 47 0.0016 25.6 2.3 51 631-689 6-60 (88)
298 1wel_A RNA-binding protein 12; 21.3 41 0.0014 28.2 2.0 67 626-700 21-98 (124)
299 1h2v_Z 20 kDa nuclear CAP bind 21.3 1.4E+02 0.0048 25.9 5.7 61 629-697 38-110 (156)
300 1fxl_A Paraneoplastic encephal 21.3 1.1E+02 0.0037 26.5 5.0 58 632-697 90-159 (167)
301 1l3k_A Heterogeneous nuclear r 20.8 79 0.0027 28.4 4.1 61 629-697 12-83 (196)
302 2e5g_A U6 snRNA-specific termi 20.7 1.2E+02 0.0042 23.5 4.8 59 632-698 10-74 (94)
303 2g4b_A Splicing factor U2AF 65 20.4 85 0.0029 27.5 4.2 65 626-698 90-166 (172)
304 2qfj_A FBP-interacting repress 20.3 80 0.0028 28.9 4.1 61 631-699 126-198 (216)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=9.8e-47 Score=420.64 Aligned_cols=214 Identities=35% Similarity=0.682 Sum_probs=195.2
Q ss_pred cccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHH
Q psy14413 375 KRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEI 451 (711)
Q Consensus 375 ~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~ 451 (711)
......++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++.+ ++.++.+++.+||||+|||+|+
T Consensus 262 ~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~Et 341 (479)
T 3tbg_A 262 GNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEV 341 (479)
T ss_dssp TCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCHHHHTTCHHHHHHHHHH
T ss_pred cCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccccchhhhccccccccceeee
Confidence 3455679999999999999999999999999999999999999999999999988 5678999999999999999999
Q ss_pred hcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCC
Q psy14413 452 MRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRR 531 (711)
Q Consensus 452 lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~ 531 (711)
||++|++|...+|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++ +++....+.+|+|||+|+|+
T Consensus 342 lRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~-~~~~~~~~~~~~pFG~G~R~ 420 (479)
T 3tbg_A 342 QRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLD-AQGHFVKPEAFLPFSAGRRA 420 (479)
T ss_dssp HHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBC-TTCCBCCCTTCCTTCCSTTS
T ss_pred ccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccCC-CCcccCCCCceecCCCCCcC
Confidence 99999999888888899999999999999999999999999999999999999999998 44555567889999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCcccceeecccc
Q psy14413 532 CLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPGELYPKQ 589 (711)
Q Consensus 532 C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~ 589 (711)
|+|++||.+|++++++.||++|+|+++++.+.+......+++..|.+++++++-|...
T Consensus 421 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~~~~v~~~pRs~~ 478 (479)
T 3tbg_A 421 CLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPRHHH 478 (479)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEECCCCBEEEEC---
T ss_pred ChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCCCeEEEEEECCCC
Confidence 9999999999999999999999999988877676666778899999998888776543
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=1.6e-44 Score=404.54 Aligned_cols=312 Identities=24% Similarity=0.414 Sum_probs=230.4
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhh--hhchhHHHHHHHHHhCC------CCCcccccc-cchhHHHHHHHHHHH
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPED--VKNNEDKIYSIAKRYGG------IPAGESNGR-RGYMLTYIIAYIRDF 346 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~i~~~ 346 (711)
..+|+.+.+.++++|+|+.++||.+++.++ ..........+...... +|....... .........+.+.++
T Consensus 145 ~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~ 224 (494)
T 3swz_A 145 QSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDL 224 (494)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 358889999999999999999999876321 11111111111112111 111111000 000111111222222
Q ss_pred Hhhhhcc-CCCCCcCCCchhHHHHHHHhhcc----------cCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhC
Q psy14413 347 ACDYYFI-GDSFETSVPWDKTVLLCINVKKR----------LTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRY 415 (711)
Q Consensus 347 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~ 415 (711)
..+.+.. ++...... ..+.+..++..... ....++++++..++.++++||+|||+++++|++++|++|
T Consensus 225 ~~~~i~~~~~~~~~~~-~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~ 303 (494)
T 3swz_A 225 LNKILENYKEKFRSDS-ITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHN 303 (494)
T ss_dssp HHHHHHHHTTTCCTTC-CCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcccc-hhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhC
Confidence 2222211 11111222 23444444433211 223589999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhc
Q psy14413 416 PHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMR 492 (711)
Q Consensus 416 p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~ 492 (711)
|++|+|+++||+++ ++.++.+++.+|||++|||+|+||++|++|..++|.+++|++++||.|||||.|.++.+++||
T Consensus 304 P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~ 383 (494)
T 3swz_A 304 PQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHH 383 (494)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhC
Confidence 99999999999998 456899999999999999999999999999878999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccCCCCCCCCCCC-cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccC
Q psy14413 493 DQEHWGDPDVFRPERFIHPTSGEV-LYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDG 571 (711)
Q Consensus 493 d~~~~~~p~~F~P~Rfl~~~~~~~-~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g 571 (711)
||++|+||++|+||||++++.... .....++|||.|+|+|+|++||.+|++++++.||++|+|+++++.+.+......|
T Consensus 384 d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~ 463 (494)
T 3swz_A 384 NEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPK 463 (494)
T ss_dssp CTTTSSSTTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEES
T ss_pred CcccCCCcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccc
Confidence 999999999999999997432221 2456899999999999999999999999999999999999987655555555668
Q ss_pred eeecccCcccceeeccc
Q psy14413 572 VTLAPAPYKAPGELYPK 588 (711)
Q Consensus 572 ~~~~p~~~~~~~~~~~~ 588 (711)
++..|.+++++++.|..
T Consensus 464 ~~~~p~~~~v~~~~R~~ 480 (494)
T 3swz_A 464 VVFLIDSFKVKIKVRQA 480 (494)
T ss_dssp SSEECCCCCEEEEECHH
T ss_pred eeecCCCcEEEEEEcCc
Confidence 88999999998887754
No 3
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1.4e-44 Score=403.28 Aligned_cols=209 Identities=33% Similarity=0.575 Sum_probs=185.9
Q ss_pred CCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcC
Q psy14413 378 TRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRH 454 (711)
Q Consensus 378 ~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl 454 (711)
+..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++ ++.++.+++.+||||+|||+|+||+
T Consensus 262 ~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl 341 (477)
T 1r9o_A 262 PSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRY 341 (477)
T ss_dssp SCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChHhhccCcHHHHHHHHHHHh
Confidence 3569999999999999999999999999999999999999999999999998 3468999999999999999999999
Q ss_pred CCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCcc
Q psy14413 455 GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLG 534 (711)
Q Consensus 455 ~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G 534 (711)
+|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||+++ ++....+..|+|||.|+|+|+|
T Consensus 342 ~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~-~~~~~~~~~~~pFG~G~r~C~G 420 (477)
T 1r9o_A 342 IDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE-GGNFKKSKYFMPFSAGKRICVG 420 (477)
T ss_dssp HTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCT-TSCBCCCTTCCTTCCGGGSCTT
T ss_pred cCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECC-CCCcCccccccCCCCccCCCCC
Confidence 999997799999999999999999999999999999999999999999999999973 3333345689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHceeeCCCCCCCCcccc-ccCeeecccCcccceeecc
Q psy14413 535 EPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTV-LDGVTLAPAPYKAPGELYP 587 (711)
Q Consensus 535 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~ 587 (711)
++||.+|++++++.|+++|+++++++.+.+.... ..+++..|.+++++++.|.
T Consensus 421 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~R~ 474 (477)
T 1r9o_A 421 EALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPFYQLCFIPIH 474 (477)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBCCCCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecCCCeEEEEEEec
Confidence 9999999999999999999999876543233333 5577778877777666553
No 4
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=1.5e-44 Score=402.65 Aligned_cols=211 Identities=34% Similarity=0.618 Sum_probs=188.3
Q ss_pred CCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcC
Q psy14413 378 TRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRH 454 (711)
Q Consensus 378 ~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl 454 (711)
...+++++++.+++++++||+|||+++++|++++|++||++|+|+++||+++ +..++.+++.+||||+|||+|+||+
T Consensus 260 ~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl 339 (476)
T 3e6i_A 260 ERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRF 339 (476)
T ss_dssp SCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCChhhccCCchHHHHHHHHHHh
Confidence 3468999999999999999999999999999999999999999999999998 4568999999999999999999999
Q ss_pred CCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCcc
Q psy14413 455 GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLG 534 (711)
Q Consensus 455 ~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G 534 (711)
+|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++ ++....+..|+|||.|+|+|+|
T Consensus 340 ~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~-~~~~~~~~~~~pFg~G~r~C~G 418 (476)
T 3e6i_A 340 ITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNE-NGKFKYSDYFKPFSTGKRVCAG 418 (476)
T ss_dssp HCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCT-TSSBCCCTTCCTTCCSTTCCTT
T ss_pred ccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcCC-CCCccCccceecCCCCCccCcc
Confidence 999997799999999999999999999999999999999999999999999999973 3344456789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHceeeCCCCCCCCcccc-ccCeeecccCcccceeecccc
Q psy14413 535 EPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTV-LDGVTLAPAPYKAPGELYPKQ 589 (711)
Q Consensus 535 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~~~ 589 (711)
++||.+|++++++.|+++|+|+++.+....+... ..|++..|.+++++++.|..+
T Consensus 419 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~R~~~ 474 (476)
T 3e6i_A 419 EGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVIPRSHH 474 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEECCCCCEEEEECC--
T ss_pred HHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCCCCeEEEEEecccc
Confidence 9999999999999999999999764433233322 368888999999888877654
No 5
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=1.5e-44 Score=402.89 Aligned_cols=208 Identities=36% Similarity=0.670 Sum_probs=185.8
Q ss_pred CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcCC
Q psy14413 379 RECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHG 455 (711)
Q Consensus 379 ~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl~ 455 (711)
..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++ ++.++.+++.+|||++|||+|+||++
T Consensus 262 ~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~ 341 (476)
T 1po5_A 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLG 341 (476)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhc
Confidence 458999999999999999999999999999999999999999999999998 34589999999999999999999999
Q ss_pred CCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCccH
Q psy14413 456 NTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGE 535 (711)
Q Consensus 456 p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~ 535 (711)
|+++..++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||+++ ++....+..|+|||.|+|.|+|+
T Consensus 342 p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~-~~~~~~~~~~lpFG~G~r~C~G~ 420 (476)
T 1po5_A 342 DLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA-NGALKRNEGFMPFSLGKRICLGE 420 (476)
T ss_dssp CSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCT-TSCBCCCTTCCTTCCSTTCCTTH
T ss_pred cCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCC-CCCccCCccccCCCCccccCcch
Confidence 99997799999999999999999999999999999999999999999999999973 33333456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHceeeCCCCCCCCcccc-ccCeeecccCcccceeecc
Q psy14413 536 PMARTSLFIFLSSLLYHFNISIPSDEPLPAVTV-LDGVTLAPAPYKAPGELYP 587 (711)
Q Consensus 536 ~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~~ 587 (711)
+||.+|++++++.|+++|+++++++.+.+.... ..|++..|.+++++++.|.
T Consensus 421 ~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~ 473 (476)
T 1po5_A 421 GIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQIRFLARH 473 (476)
T ss_dssp HHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCCCCCCBEEEECC
T ss_pred HHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecCcceEEEEEecC
Confidence 999999999999999999999876643333333 5577788888877776553
No 6
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=1.7e-44 Score=402.36 Aligned_cols=208 Identities=31% Similarity=0.614 Sum_probs=185.6
Q ss_pred CCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcC
Q psy14413 378 TRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRH 454 (711)
Q Consensus 378 ~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl 454 (711)
+..+++++++++++++++||+|||+++++|++++|++||++|+|+++|++++ ++.++.+++.+||||+|||+|+||+
T Consensus 261 ~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl 340 (476)
T 2fdv_A 261 NTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRF 340 (476)
T ss_dssp TCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCChhhhhcChHHHHHHHHHHHh
Confidence 3569999999999999999999999999999999999999999999999998 2458999999999999999999999
Q ss_pred CCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCcc
Q psy14413 455 GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLG 534 (711)
Q Consensus 455 ~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G 534 (711)
+|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||+++ ++....+..|+|||.|+|.|+|
T Consensus 341 ~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~-~~~~~~~~~~lpFG~G~r~C~G 419 (476)
T 2fdv_A 341 GDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE-KGQFKKSDAFVPFSIGKRNCFG 419 (476)
T ss_dssp HCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCT-TSCBCCCTTCCTTCCSTTCCTT
T ss_pred cCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCC-CCCCCCCcCcccCCCCCCCCCC
Confidence 999997899999999999999999999999999999999999999999999999973 3333345689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHceeeCCCCCCCCcccc-ccCeeecccCcccceeec
Q psy14413 535 EPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTV-LDGVTLAPAPYKAPGELY 586 (711)
Q Consensus 535 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~g~~~~p~~~~~~~~~~ 586 (711)
++||.+|++++++.|+++|+++++++.+.+.... ..|++..|.+++++++.|
T Consensus 420 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R 472 (476)
T 2fdv_A 420 EGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMSFLPR 472 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEECCCCCEEEEEC
T ss_pred hHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecCCceEEEEEec
Confidence 9999999999999999999999876643233333 557778888777766655
No 7
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=3.6e-45 Score=406.14 Aligned_cols=303 Identities=17% Similarity=0.183 Sum_probs=223.5
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHH-------HHhCCCCCcccccccchhHHHHHHHHHHHHh
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIA-------KRYGGIPAGESNGRRGYMLTYIIAYIRDFAC 348 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 348 (711)
.++++.+.+.++++++++.++||.+++.+........+..+. ..+..+.............+ .+.+...
T Consensus 142 ~~~~~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ 217 (461)
T 3ld6_A 142 GEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHR----EIKDIFY 217 (461)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHH----HHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHcCcchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHH----HHHHHHH
Confidence 457788899999999999999997654221111111111111 11111111100001111111 2222222
Q ss_pred hhhccCCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhh
Q psy14413 349 DYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS 428 (711)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~ 428 (711)
+.+.. +.......++.+..++....+++..+++++++++++++++||+|||+++++|++++|+.||++|+|+++|+++
T Consensus 218 ~~i~~--r~~~~~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~ 295 (461)
T 3ld6_A 218 KAIQK--RRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKT 295 (461)
T ss_dssp HHHHH--HTTCCCCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHH--HHhcCCCCcchhhhhHHhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHH
Confidence 22211 1122233345555555555555667999999999999999999999999999999999999999999999999
Q ss_pred h----CCCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcc
Q psy14413 429 L----NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFR 504 (711)
Q Consensus 429 ~----~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~ 504 (711)
+ ....+.+++++||||+|||+|+||++|+++ ...|.+++|++++||.|||||.|.++.+++|+||++|+||++|+
T Consensus 296 v~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~-~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~ 374 (461)
T 3ld6_A 296 VCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIM-IMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFN 374 (461)
T ss_dssp HHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCC
T ss_pred HhcccccchhHHHHHHHhhhhheeeeccccCCchh-ccccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccC
Confidence 8 234678889999999999999999999998 67899999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCccccee
Q psy14413 505 PERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPGE 584 (711)
Q Consensus 505 P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~ 584 (711)
||||++ +++....+..|+|||+|+|+|+|++||.+|++++++.||++|+|+++++.. |... ..+++..|..+.|+++
T Consensus 375 PeRfl~-~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~-~~~~-~~~~~~~p~~~~v~~~ 451 (461)
T 3ld6_A 375 PDRYLQ-DNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYF-PTVN-YTTMIHTPENPVIRYK 451 (461)
T ss_dssp GGGGGS-CCHHHHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCC-CCBC-CSSSSCCBSSCEEEEE
T ss_pred ccccCC-CCcccCCCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCC-Cccc-ccceEEcCCceEEEEE
Confidence 999998 333344567899999999999999999999999999999999999987643 2222 3456667777766665
Q ss_pred eccc
Q psy14413 585 LYPK 588 (711)
Q Consensus 585 ~~~~ 588 (711)
.|..
T Consensus 452 ~Rss 455 (461)
T 3ld6_A 452 RRST 455 (461)
T ss_dssp ECC-
T ss_pred ECCC
Confidence 5543
No 8
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=4.8e-44 Score=399.32 Aligned_cols=208 Identities=37% Similarity=0.729 Sum_probs=187.0
Q ss_pred CCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcC
Q psy14413 378 TRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRH 454 (711)
Q Consensus 378 ~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl 454 (711)
+..+++++++.++.++++||+|||+++++|++++|++||++|+|+++|++++ ++.++.+++.+|||++|||+|+||+
T Consensus 266 ~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl 345 (481)
T 3czh_A 266 SSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRF 345 (481)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhh
Confidence 3469999999999999999999999999999999999999999999999998 3568999999999999999999999
Q ss_pred CCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCcc
Q psy14413 455 GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLG 534 (711)
Q Consensus 455 ~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G 534 (711)
+|+++..++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||+++ ++....+..|+|||.|+|.|+|
T Consensus 346 ~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~-~~~~~~~~~~lpFG~G~r~C~G 424 (481)
T 3czh_A 346 CNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDS-SGYFAKKEALVPFSLGRRHCLG 424 (481)
T ss_dssp HCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCT-TSCBCCCTTCCTTCCSTTCCTT
T ss_pred ccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCceeCC-CCCCcCCcceeCCCCCCCCCCC
Confidence 999997789999999999999999999999999999999999999999999999973 3333456789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCcccceeecc
Q psy14413 535 EPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPGELYP 587 (711)
Q Consensus 535 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~ 587 (711)
++||.+|++++++.|+++|+++++++.. +......|++..|.++.++++-|.
T Consensus 425 ~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~ 476 (481)
T 3czh_A 425 EHLARMEMFLFFTALLQRFHLHFPHELV-PDLKPRLGMTLQPQPYLICAERRH 476 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEECGGGCC-CCCCCCSSSSCCCCCCCBEEEECC
T ss_pred HHHHHHHHHHHHHHHHHheEEeCCCCCC-CCcccCCCceecCCceEEEEEecc
Confidence 9999999999999999999999865542 223334588889999988777654
No 9
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=7.5e-44 Score=398.13 Aligned_cols=302 Identities=23% Similarity=0.323 Sum_probs=219.5
Q ss_pred ccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCC-------------CCc-------ccccccchhH
Q psy14413 277 QVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGI-------------PAG-------ESNGRRGYML 336 (711)
Q Consensus 277 ~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-------~~~~~~~~~~ 336 (711)
.+|+.+.+.++++|+|+.++||.+++. +.+..+.+......+... +.. ..........
T Consensus 147 ~~d~~~~~~~~~~dvi~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 224 (485)
T 3nxu_A 147 PVTLKDVFGAYSMDVITSTSFGVNIDS--LNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVT 224 (485)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHSCCCCG--GGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHH
Confidence 578899999999999999999999873 222222222221111100 000 0000111122
Q ss_pred HHHHHHHHHHHhhhhccCCCCCcCCCchhHHHHHHHhhcc----cCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHH
Q psy14413 337 TYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKR----LTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYL 412 (711)
Q Consensus 337 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l 412 (711)
..+...+.+..++.. ........+.+..++..... ....+++++++++++++++||+|||+++++|++++|
T Consensus 225 ~~~~~~~~~~~~~~~-----~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L 299 (485)
T 3nxu_A 225 NFLRKSVKRMKESRL-----EDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYEL 299 (485)
T ss_dssp HHHHHHHHHHHHHHH-----HCC---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----hccCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 222222222221110 01112223444444433221 234699999999999999999999999999999999
Q ss_pred HhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhh
Q psy14413 413 IRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWS 489 (711)
Q Consensus 413 ~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~ 489 (711)
++||++|+|+++|++++ .+.++.+++.+||||+|||+|+||++|+++ .++|.+++|++++|+.|||||.|.++.++
T Consensus 300 ~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~ 378 (485)
T 3nxu_A 300 ATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAM-RLERVCKKDVEINGMFIPKGVVVMIPSYA 378 (485)
T ss_dssp HTCHHHHHHHHHHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCS-CEEEECCSCEEETTEEECTTCEEEECHHH
T ss_pred HcCHHHHHHHHHHHHHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCcc-CcceeeCCCeeECCEEECCCCEEEEchHH
Confidence 99999999999999998 456899999999999999999999999998 58999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccc
Q psy14413 490 IMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVL 569 (711)
Q Consensus 490 ~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~ 569 (711)
+||||++|+||++|+||||+++ ++....+..++|||.|+|+|+|++||.+|++++++.|+++|+|+++++.+.+ ....
T Consensus 379 ~~~d~~~~~dp~~F~PeR~l~~-~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~-~~~~ 456 (485)
T 3nxu_A 379 LHRDPKYWTEPEKFLPERFSKK-NKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIP-LKLS 456 (485)
T ss_dssp HHTCTTTCSSTTSCCGGGGSHH-HHTTSCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSS-CCBC
T ss_pred hcCChhhcCCccCcCccccCCC-ccccCCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCC-cccC
Confidence 9999999999999999999963 2222345689999999999999999999999999999999999987664322 2233
Q ss_pred cCeeecc-cCcccceeeccc
Q psy14413 570 DGVTLAP-APYKAPGELYPK 588 (711)
Q Consensus 570 ~g~~~~p-~~~~~~~~~~~~ 588 (711)
.+.+..| .+++++++.|..
T Consensus 457 ~~~~~~p~~~~~~~~~~r~~ 476 (485)
T 3nxu_A 457 LGGLLQPEKPVVLKVESRDG 476 (485)
T ss_dssp SSSSCCBSSCCEEEEEEC--
T ss_pred CCeeccCCCCeEEEEEEccC
Confidence 3444555 577777766643
No 10
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-44 Score=399.84 Aligned_cols=208 Identities=29% Similarity=0.600 Sum_probs=185.7
Q ss_pred CCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcCCC
Q psy14413 380 ECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHGN 456 (711)
Q Consensus 380 ~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl~p 456 (711)
.++++++..+++++++||+|||+++++|++++|++||++|+|+++||+++ ++.++.+++.+||||+|||+|+||++|
T Consensus 274 ~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p 353 (507)
T 3pm0_A 274 RLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSS 353 (507)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCC
Confidence 59999999999999999999999999999999999999999999999998 356899999999999999999999999
Q ss_pred CCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCc--CCCCccccCCCCCCCcc
Q psy14413 457 TAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVL--YDETLIPFGLGKRRCLG 534 (711)
Q Consensus 457 ~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~--~~~~~l~FG~G~r~C~G 534 (711)
++|..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++++ +... .+..++|||.|+|+|+|
T Consensus 354 ~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~-~~~~~~~~~~~~pFg~G~r~C~G 432 (507)
T 3pm0_A 354 FVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKD-GLINKDLTSRVMIFSVGKRRCIG 432 (507)
T ss_dssp SSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSSCCGGGGBCTT-SCBCHHHHTTCCSSCCSTTCCSC
T ss_pred CcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCccCCCcccCCC-CcccCCCcccccCCCCCCCCCCC
Confidence 99977899999999999999999999999999999999999999999999999732 2211 23589999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCcccceeecccc
Q psy14413 535 EPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPGELYPKQ 589 (711)
Q Consensus 535 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~ 589 (711)
++||.+|++++++.||++|+|+++++.+ +......|++..|.+++++++.|...
T Consensus 433 ~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~p~~~~v~~~~R~~~ 486 (507)
T 3pm0_A 433 EELSKMQLFLFISILAHQCDFRANPNEP-AKMNFSYGLTIKPKSFKVNVTLRESM 486 (507)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEECTTCC-SCCCEEESSSEEECSCCEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHeEEecCCCCC-CCCCCCCCccccCCCcEEEEEEcccc
Confidence 9999999999999999999999876643 33334457788888887777766543
No 11
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=2.7e-43 Score=395.52 Aligned_cols=302 Identities=19% Similarity=0.234 Sum_probs=225.3
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhH-HHHHHHHHhCC------CCCc--ccccccchhHHHHHHHHHHH
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNED-KIYSIAKRYGG------IPAG--ESNGRRGYMLTYIIAYIRDF 346 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~i~~~ 346 (711)
..+|+.+.++++++|+|+.++||.+++.++...... .+..+...... .+.. ........+.+++...+++.
T Consensus 183 ~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 262 (503)
T 3s79_A 183 GYVDVLTLLRRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEK 262 (503)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHTTCCHHHHHSGGGTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEcHHHHHHHHHHHHHHHHHcCcccCchhHHHHHHHHHHHHHHHhcCcHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 358889999999999999999999987433222211 11111111100 0000 00001111122222222222
Q ss_pred HhhhhccCCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHH
Q psy14413 347 ACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEI 426 (711)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei 426 (711)
.++. +..+......+.+..++... .+.+++++++...++++++||+|||+++++|++++|++||++|+|+++||
T Consensus 263 ~~~~----~~~~~~~~~~d~l~~ll~~~--~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei 336 (503)
T 3s79_A 263 RRRI----STEEKLEECMDFATELILAE--KRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEI 336 (503)
T ss_dssp HHHH----HTCTTTTTTCCHHHHHHHHH--HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHh----hcccccchHHHHHHHHHHhc--ccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 2111 00011111223444444332 34569999999999999999999999999999999999999999999999
Q ss_pred hhh--CCCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcc
Q psy14413 427 DSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFR 504 (711)
Q Consensus 427 ~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~ 504 (711)
+++ ++.++.+++.+|||++|||+|+||++|++|. ..|.+++|++++||.|||||.|.++.+++|+| ++|+||++|+
T Consensus 337 ~~v~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~ 414 (503)
T 3s79_A 337 QTVIGERDIKIDDIQKLKVMENFIYESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFT 414 (503)
T ss_dssp HHHTTTSCCCHHHHTTCHHHHHHHHHHHHHSCSSCC-EEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCC
T ss_pred HHHhCCCCCCHHHHhcCHHHHHHHHhhhccCCCccc-ccccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCC
Confidence 998 5678999999999999999999999999995 66999999999999999999999999999999 9999999999
Q ss_pred cCCCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCcc--cc
Q psy14413 505 PERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYK--AP 582 (711)
Q Consensus 505 P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~--~~ 582 (711)
||||++. .....|+|||+|+|.|+|++||.+|++++++.|+++|+|+++++.+.++.....|++..|.+.+ +.
T Consensus 415 PeRf~~~-----~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 489 (503)
T 3s79_A 415 LENFAKN-----VPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLE 489 (503)
T ss_dssp GGGGSSC-----CCTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCC
T ss_pred hhhcCCC-----CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceee
Confidence 9999972 1345799999999999999999999999999999999999988766555666678888888854 56
Q ss_pred eeeccccc
Q psy14413 583 GELYPKQM 590 (711)
Q Consensus 583 ~~~~~~~~ 590 (711)
++++++..
T Consensus 490 v~~~~R~~ 497 (503)
T 3s79_A 490 MIFTPRNS 497 (503)
T ss_dssp EEEEECC-
T ss_pred EEeccCCc
Confidence 66666653
No 12
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=1.3e-43 Score=397.44 Aligned_cols=203 Identities=33% Similarity=0.623 Sum_probs=180.4
Q ss_pred CCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh-C------CCCChhhhcCChhHHHHHHHHh
Q psy14413 380 ECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL-N------KEPTILDRYKCPYLEATIMEIM 452 (711)
Q Consensus 380 ~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~-~------~~~~~~~~~~lpyl~a~i~E~l 452 (711)
.++++++..++.++++||+|||+++++|++++|++||++|+|+++|++++ . +.+ .+++.+|||++|||+|+|
T Consensus 274 ~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~l 352 (496)
T 3qz1_A 274 QLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVL 352 (496)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999988 2 235 889999999999999999
Q ss_pred cCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCC
Q psy14413 453 RHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRC 532 (711)
Q Consensus 453 Rl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C 532 (711)
|++|++|..++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||++++ ....++|||.|+|+|
T Consensus 353 Rl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~-----~~~~~~pFg~G~r~C 427 (496)
T 3qz1_A 353 RLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPG-----ANPSALAFGCGARVC 427 (496)
T ss_dssp HHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCCCCCC--------CCCCCCSSCCSSSSC
T ss_pred HhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCcccccCCC-----CCcCccCCCCCCCCC
Confidence 999999977899999999999999999999999999999999999999999999999732 123799999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccc--cCeeecccCcccceeeccc
Q psy14413 533 LGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVL--DGVTLAPAPYKAPGELYPK 588 (711)
Q Consensus 533 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~--~g~~~~p~~~~~~~~~~~~ 588 (711)
+|++||.+|++++++.|+++|+++++++...++.... .|++..|.+++++++.|..
T Consensus 428 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~ 485 (496)
T 3qz1_A 428 LGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQVRLQPRGV 485 (496)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCCCCCCCCCCC--
T ss_pred ccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCCceEEEEEEecc
Confidence 9999999999999999999999998865433333333 5888889998888877654
No 13
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=396.60 Aligned_cols=206 Identities=34% Similarity=0.698 Sum_probs=184.9
Q ss_pred CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcCC
Q psy14413 379 RECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHG 455 (711)
Q Consensus 379 ~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl~ 455 (711)
..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++ ++.++.+++.+|||++|||+|+||++
T Consensus 276 ~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~ 355 (495)
T 2hi4_A 276 NLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHS 355 (495)
T ss_dssp EECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHcc
Confidence 358999999999999999999999999999999999999999999999998 34588999999999999999999999
Q ss_pred CCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCC--cCCCCccccCCCCCCCc
Q psy14413 456 NTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEV--LYDETLIPFGLGKRRCL 533 (711)
Q Consensus 456 p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~--~~~~~~l~FG~G~r~C~ 533 (711)
|++|..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||++++.... ..+..|+|||.|+|+|+
T Consensus 356 p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~ 435 (495)
T 2hi4_A 356 SFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCI 435 (495)
T ss_dssp CSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCT
T ss_pred CCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCC
Confidence 9999778999999999999999999999999999999999999999999999997322111 23567999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCc-ccceeec
Q psy14413 534 GEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPY-KAPGELY 586 (711)
Q Consensus 534 G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~-~~~~~~~ 586 (711)
|++||.+|++++++.|+++|+++++++.. ++.....|++..|.++ +++++ |
T Consensus 436 G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~~~~p~~~~~v~~~-R 487 (495)
T 2hi4_A 436 GEVLAKWEIFLFLAILLQQLEFSVPPGVK-VDLTPIYGLTMKHARCEHVQAR-R 487 (495)
T ss_dssp THHHHHHHHHHHHHHHHHHCEEECCTTCC-CCCCCBCSSSCBCCCCCCBEEE-C
T ss_pred CHHHHHHHHHHHHHHHHHhCEEeCCCCCC-CCccccCCceecCCCcceEEEE-E
Confidence 99999999999999999999999876543 3334455888889998 88887 6
No 14
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=5.1e-43 Score=386.92 Aligned_cols=279 Identities=19% Similarity=0.255 Sum_probs=207.6
Q ss_pred ccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCCC
Q psy14413 277 QVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 356 (711)
Q Consensus 277 ~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 356 (711)
.+|+.+.++++++|+|+.++|| +.+.++ ......+..+...+...+............+ ....+.++..+.+..+.
T Consensus 140 ~vd~~~~~~~~~~~vi~~~~fG-~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~i~~r~- 215 (444)
T 2ve3_A 140 EVIWYPQLRRMTFDVAATLFMG-EKVSQN-PQLFPWFETYIQGLFSLPIPLPNTLFGKSQR-ARALLLAELEKIIKARQ- 215 (444)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTC-HHHHSC-TTHHHHHHHHHHHHSSCCCCSTTSHHHHHHH-HHHHHHHHHHHHHHHHH-
T ss_pred cEeHHHHHHHHHHHHHHHHHcC-CCcccH-HHHHHHHHHHHHHHhcCCccCCCcHHHHHHH-HHHHHHHHHHHHHHHHh-
Confidence 5788889999999999999999 322212 2222333333333322211100000000100 11112222222221111
Q ss_pred CCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh--CCCCC
Q psy14413 357 FETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL--NKEPT 434 (711)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~--~~~~~ 434 (711)
+...+.++.+..++......+..+++++++++++++++||+|||+++++|++++|++||++|+|+++|++.+ ...++
T Consensus 216 -~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~ 294 (444)
T 2ve3_A 216 -QQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELT 294 (444)
T ss_dssp -TSCCCCSSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSSCCC
T ss_pred -cCCCCccCHHHHHHhccccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCC
Confidence 111233455554444333334569999999999999999999999999999999999999999999999998 44689
Q ss_pred hhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 435 ILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 435 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
.+++.+||||+|||+|+||++|+++ .++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||++++..
T Consensus 295 ~~~l~~lpyl~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~ 373 (444)
T 2ve3_A 295 AETLKKMPYLDQVLQEVLRLIPPVG-GGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSA 373 (444)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTT
T ss_pred hhhhhcChHHHHHHHHHHhcCCCcc-CccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcc
Confidence 9999999999999999999999999 578999999999999999999999999999999999999999999999973322
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDE 561 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~ 561 (711)
....+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++.
T Consensus 374 ~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 420 (444)
T 2ve3_A 374 THNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ 420 (444)
T ss_dssp TTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSC
T ss_pred cCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCC
Confidence 22345579999999999999999999999999999999999987553
No 15
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=2.1e-43 Score=392.57 Aligned_cols=300 Identities=17% Similarity=0.206 Sum_probs=218.8
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhC---CCCC-------cccccccchhHHHHHHHHHH
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYG---GIPA-------GESNGRRGYMLTYIIAYIRD 345 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~i~~ 345 (711)
..+|+.+.+.++++++++.++||.+++.+........+..+..... ..+. .............+.+++.+
T Consensus 150 ~~~d~~~~~~~~~~~vi~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (467)
T 3dbg_A 150 KTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDE 229 (467)
T ss_dssp SCEEHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHC------------------------CCHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHH
Confidence 4578888999999999999999999875333333332222221110 0000 00000011112222223333
Q ss_pred HHhhhhccCCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHH
Q psy14413 346 FACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEE 425 (711)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~E 425 (711)
.+++. .+.....++.+..++......+..++++++..+++.+++||+|||+++++|++++|++||++|+++++|
T Consensus 230 ~i~~r------~~~~~~~~dll~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E 303 (467)
T 3dbg_A 230 IIAER------RASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDE 303 (467)
T ss_dssp HHHHH------TTCCSSCCSHHHHHTTC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHH------HhcCCCchHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 22211 111122334444444433333446999999999999999999999999999999999999999999999
Q ss_pred Hhhh--CCCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCc
Q psy14413 426 IDSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 503 (711)
Q Consensus 426 i~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F 503 (711)
++++ +..++.+++.+|||++|||+|+||++|+++ .++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|
T Consensus 304 i~~~~~~~~~~~~~l~~l~yl~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F 382 (467)
T 3dbg_A 304 VEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVW-VLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEF 382 (467)
T ss_dssp HHHHHTTSCCCHHHHTTCHHHHHHHHHHHHHSCSCC-CEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCC
T ss_pred HHHHhCCCCCCHHHHhhCHHHHHHHHHHhhcCCCcc-ccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCcccc
Confidence 9988 567899999999999999999999999998 5899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCcccce
Q psy14413 504 RPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPG 583 (711)
Q Consensus 504 ~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~ 583 (711)
+||||+++ .+.......++|||.|+|.|+|++||.+|++++++.|+++|+++++++.+ .....+++..|..+++.=
T Consensus 383 ~PeRfl~~-~~~~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~p~~l~~~~ 458 (467)
T 3dbg_A 383 DPDRWLPE-RAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN---DAVRVGITLRPHDLLVRP 458 (467)
T ss_dssp CGGGGSHH-HHTTSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCE---EEEEESSSEEEEECEEEE
T ss_pred CCccCCCC-ccccCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCC---CccceeeEecCCCCccch
Confidence 99999962 22223456899999999999999999999999999999999999876542 233447777888766554
Q ss_pred eec
Q psy14413 584 ELY 586 (711)
Q Consensus 584 ~~~ 586 (711)
..|
T Consensus 459 ~~~ 461 (467)
T 3dbg_A 459 VAR 461 (467)
T ss_dssp EEC
T ss_pred hhh
Confidence 433
No 16
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=9.8e-43 Score=388.62 Aligned_cols=201 Identities=27% Similarity=0.489 Sum_probs=176.5
Q ss_pred CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcCC
Q psy14413 379 RECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHG 455 (711)
Q Consensus 379 ~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl~ 455 (711)
..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++ .+.++.+++.+||||+|||+|+||++
T Consensus 277 ~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~ 356 (482)
T 3k9v_A 277 DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLT 356 (482)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHS
T ss_pred cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcC
Confidence 358999999999999999999999999999999999999999999999998 35689999999999999999999999
Q ss_pred CCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCccH
Q psy14413 456 NTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGE 535 (711)
Q Consensus 456 p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~ 535 (711)
|++| .++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++++. ...+..|+|||.|+|+|+|+
T Consensus 357 p~~~-~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~--~~~~~~~~pFg~G~r~C~G~ 433 (482)
T 3k9v_A 357 PSVP-FTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEK--KINPFAHLPFGIGKRMCIGR 433 (482)
T ss_dssp CSCC-EEEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGGGTCTTS--CCCGGGCCTTCCSTTSCSCH
T ss_pred CCCc-CcccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCccccCCCCC--CCCCccccCCCCCCcCCccH
Confidence 9999 48999999999999999999999999999999999999999999999997432 23456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCccccee
Q psy14413 536 PMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPGE 584 (711)
Q Consensus 536 ~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~ 584 (711)
+||.+|+++++++|+++|+++++++.+.. ....+......+.+++++
T Consensus 434 ~~A~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~ 480 (482)
T 3k9v_A 434 RLAELQLHLALCWIIQKYDIVATDNEPVE--MLHLGILVPSRELPIAFR 480 (482)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEESCCCCCC--EEESSSEEESSSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcEEeccCCCCcc--cccceeecCCCCcceEEe
Confidence 99999999999999999999987654321 112234444445555554
No 17
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=2.1e-42 Score=386.66 Aligned_cols=205 Identities=21% Similarity=0.347 Sum_probs=179.3
Q ss_pred CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcCC
Q psy14413 379 RECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHG 455 (711)
Q Consensus 379 ~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl~ 455 (711)
..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++ .+.++.+++.+||||+|||+|+||++
T Consensus 269 ~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~ 348 (487)
T 3n9y_A 269 SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLH 348 (487)
T ss_dssp CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhC
Confidence 368999999999999999999999999999999999999999999999988 45567899999999999999999999
Q ss_pred CCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCccH
Q psy14413 456 NTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGE 535 (711)
Q Consensus 456 p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~ 535 (711)
|+++ .++|.+++|++++||.|||||.|.++.+++||||++|+||++|+||||++++ + ......++|||.|+|+|+|+
T Consensus 349 p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~-~-~~~~~~~~pFg~G~r~C~G~ 425 (487)
T 3n9y_A 349 PISV-TLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD-K-NITYFRNLGFGWGVRQCLGR 425 (487)
T ss_dssp CSSS-EEEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTCSC-T-TSSTTTCCTTCCGGGSCTTH
T ss_pred Cccc-ccceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCcccCChhhcCCCC-C-CCCCCCCCCCCCCCCCCchH
Confidence 9998 6899999999999999999999999999999999999999999999999732 2 23456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeeccc-Ccccceeecccc
Q psy14413 536 PMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPA-PYKAPGELYPKQ 589 (711)
Q Consensus 536 ~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~-~~~~~~~~~~~~ 589 (711)
+||.+|++++++.|+++|+|+++++.+ .....+++..|. ++.++++.|..+
T Consensus 426 ~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~r~~~ 477 (487)
T 3n9y_A 426 RIAELEMTIFLINMLENFRVEIQHLSD---VGTTFNLILMPEKPISFTFWPFNQE 477 (487)
T ss_dssp HHHHHHHHHHHHHHHHHEEEECTTCCC---CCEEESSSEEESSCCCEEEEEC---
T ss_pred HHHHHHHHHHHHHHHHhCEEEecCCcc---cccceeeeecCCCCceeEEEECCcc
Confidence 999999999999999999999876532 223335555554 666666655443
No 18
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=3.6e-43 Score=389.41 Aligned_cols=305 Identities=17% Similarity=0.191 Sum_probs=212.4
Q ss_pred ccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCC----CCCccccc--ccchhHHHHHHHHHHHHhhh
Q psy14413 277 QVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGG----IPAGESNG--RRGYMLTYIIAYIRDFACDY 350 (711)
Q Consensus 277 ~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~i~~~~~~~ 350 (711)
.+|+.+.+.++++|+|+.++||.+++..........+..+...+.. .+...... ........+.+++.+.+++.
T Consensus 133 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r 212 (455)
T 2cib_A 133 EIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGR 212 (455)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTCHHHHTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEeHHHHHHHHHHHHHHHHHcCCCcchhhhHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788899999999999999999875421111112222222111100 01000000 00001111222222222111
Q ss_pred hccCCCCCcCCCchhHHHHHHHhhcccCCC-CCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh
Q psy14413 351 YFIGDSFETSVPWDKTVLLCINVKKRLTRE-CTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL 429 (711)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~ 429 (711)
.. .........+.+..++......+.. +++++++.+++++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus 213 ~~---~~~~~~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~ 289 (455)
T 2cib_A 213 IA---NPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDEL 289 (455)
T ss_dssp HH---CC-----CCCHHHHHHHCBCTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred Hh---cccCCCCcccHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 00 0010001114444444333233334 9999999999999999999999999999999999999999999999998
Q ss_pred ---CCCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccC
Q psy14413 430 ---NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPE 506 (711)
Q Consensus 430 ---~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~ 506 (711)
.+.++.+++.+|||++|||+|+||++|+++ .++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||
T Consensus 290 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~Pe 368 (455)
T 2cib_A 290 YGDGRSVSFHALRQIPQLENVLKETLRLHPPLI-ILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPA 368 (455)
T ss_dssp GGGCCCHHHHTTSCCHHHHHHHHHHHHHSCSCC-CEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGG
T ss_pred hCCCCCCCHHHHhcCHHHHHHHHHHHhcCCccc-ccceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcc
Confidence 246788999999999999999999999998 6899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCcc-ccccCeeeccc-Cccccee
Q psy14413 507 RFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAV-TVLDGVTLAPA-PYKAPGE 584 (711)
Q Consensus 507 Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~g~~~~p~-~~~~~~~ 584 (711)
||++++......+..++|||.|+|.|+|++||.+|++++++.|+++|+++++.+. +.. ....+....|. +++++++
T Consensus 369 R~l~~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~p~~~~~v~~~ 446 (455)
T 2cib_A 369 RYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPP--ESYRNDHSKMVVQLAQPAAVRYR 446 (455)
T ss_dssp GGSTTTCHHHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCG--GGCCEECSSSSCEECSCCEEEEE
T ss_pred cCCCCCcccccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCc--cccccccccccccCCCCceEEEE
Confidence 9996322111135679999999999999999999999999999999999986321 111 11134444454 5666665
Q ss_pred ecc
Q psy14413 585 LYP 587 (711)
Q Consensus 585 ~~~ 587 (711)
.|.
T Consensus 447 ~R~ 449 (455)
T 2cib_A 447 RRT 449 (455)
T ss_dssp EC-
T ss_pred ECc
Confidence 443
No 19
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=1.8e-42 Score=383.77 Aligned_cols=202 Identities=24% Similarity=0.395 Sum_probs=176.6
Q ss_pred CCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CCCCChhhhcCChhHHHHHHHHhcC
Q psy14413 378 TRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRH 454 (711)
Q Consensus 378 ~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~~~~~~~~~~lpyl~a~i~E~lRl 454 (711)
...++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++ .+.++.+++.+||||+|||+|+||+
T Consensus 236 ~~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl 315 (456)
T 3mdm_A 236 EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRL 315 (456)
T ss_dssp SSCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHh
Confidence 3468899999999999999999999999999999999999999999999998 4568999999999999999999999
Q ss_pred CCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCcc
Q psy14413 455 GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLG 534 (711)
Q Consensus 455 ~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G 534 (711)
+|+++ .+.|.+++|++++||.|||||.|.++.+++||||++|+||++|+||||+++. ......++|||.|+|.|+|
T Consensus 316 ~p~~~-~~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~---~~~~~~~~pFg~G~r~C~G 391 (456)
T 3mdm_A 316 YPPAW-GTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA---PKPRFTYFPFSLGHRSCIG 391 (456)
T ss_dssp CCSSC-CEEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTS---CCCSSSCCTTCCGGGSCTT
T ss_pred CCCcc-ccccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCC---CCCCCcccCCCCCCcCCCC
Confidence 99999 6789999999999999999999999999999999999999999999999732 2235679999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeeccc-Ccccceeec
Q psy14413 535 EPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPA-PYKAPGELY 586 (711)
Q Consensus 535 ~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~-~~~~~~~~~ 586 (711)
++||.+|++++++.|+++|+++++++.+. ....+.+..|. ++++.++.|
T Consensus 392 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~r 441 (456)
T 3mdm_A 392 QQFAQMEVKVVMAKLLQRLEFRLVPGQRF---GLQEQATLKPLDPVLCTLRPR 441 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEECTTCCC---CEEESSSEEESSCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCeEEeCCCCcc---eeecceEEecCCCeEEEEEEc
Confidence 99999999999999999999998766432 12223334443 555555433
No 20
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=1.5e-41 Score=375.58 Aligned_cols=301 Identities=14% Similarity=0.183 Sum_probs=215.8
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhh-hhchhHHHHHHHHHhC----CCCCcccccc-----cchhHHHHHHHHHH
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPED-VKNNEDKIYSIAKRYG----GIPAGESNGR-----RGYMLTYIIAYIRD 345 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~i~~ 345 (711)
..+|+.+.+.++++|+|+.++||.+++... .......+..+..... ..|....... .......+.+++.+
T Consensus 136 ~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~ 215 (450)
T 3gw9_A 136 GEINLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSE 215 (450)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHcCcchhhhhhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHH
Confidence 357889999999999999999997754211 1112222222211110 0111000000 00111112222222
Q ss_pred HHhhhhccCCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHH--hCCchHHHHH
Q psy14413 346 FACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLI--RYPHVQRKIQ 423 (711)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~--~~p~~~~kl~ 423 (711)
.+.+... .........++.+..++......+..++++++..+++++++||+|||+++++|++++|+ .||++|++++
T Consensus 216 ~i~~r~~--~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~ 293 (450)
T 3gw9_A 216 IIIARKE--EEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALR 293 (450)
T ss_dssp HHHHHHH--HHHHTSCCCCSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHH
T ss_pred HHHHHHH--hhcccCCccchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHH
Confidence 2111100 00011123345555555444444557999999999999999999999999999999999 9999999999
Q ss_pred HHHhhhCCCCChhhh-cCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCC
Q psy14413 424 EEIDSLNKEPTILDR-YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 502 (711)
Q Consensus 424 ~Ei~~~~~~~~~~~~-~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~ 502 (711)
+|++++...++.+++ .+||||+|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++||||++|+||++
T Consensus 294 ~Ei~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~ 372 (450)
T 3gw9_A 294 KEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLL-MLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRR 372 (450)
T ss_dssp HHHTTCCSSCCHHHHHHHCHHHHHHHHHHHHHSCSCC-CEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HHHHhccCCCChHHHHHhcHHHHHHHHHHHHhCCchh-ccccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccc
Confidence 999999777899999 999999999999999999998 578999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCcccc
Q psy14413 503 FRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAP 582 (711)
Q Consensus 503 F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~~~ 582 (711)
|+|||+.. .+..|+|||.|+|+|+|++||.+|++++++.|+++|+|+++++.. +.... .+++..|.+..+.
T Consensus 373 F~PeR~~~-------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~-~~~~~~p~~~~~~ 443 (450)
T 3gw9_A 373 WDPERDEK-------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEV-PDPDY-HTMVVGPTASQCR 443 (450)
T ss_dssp CCTTCCCS-------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSC-CCEET-TSSSCEECGGGCE
T ss_pred cCCCcCcC-------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCC-CCCcc-ccceecCCCCceE
Confidence 99999321 256799999999999999999999999999999999999875432 22222 3455556533444
Q ss_pred eeeccc
Q psy14413 583 GELYPK 588 (711)
Q Consensus 583 ~~~~~~ 588 (711)
++++++
T Consensus 444 v~~~~R 449 (450)
T 3gw9_A 444 VKYIRR 449 (450)
T ss_dssp EEEEEC
T ss_pred eEeeec
Confidence 444443
No 21
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=1.2e-41 Score=378.57 Aligned_cols=300 Identities=21% Similarity=0.321 Sum_probs=213.5
Q ss_pred ccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHH---HHHh---CCC-CCcccc--cccchhHHHHHHHHHHHH
Q psy14413 277 QVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSI---AKRY---GGI-PAGESN--GRRGYMLTYIIAYIRDFA 347 (711)
Q Consensus 277 ~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~---~~~~---~~~-~~~~~~--~~~~~~~~~~~~~i~~~~ 347 (711)
.+|+.+.+.++++|+|+.++||.+++..+..........+ .... ... +..... ........ ....+.++.
T Consensus 138 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (470)
T 2ij2_A 138 HIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQE-DIKVMNDLV 216 (470)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHH-HHHHHHHHH
T ss_pred eEEHHHHHHHHHHHHHHHHHcCCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHH-HHHHHHHHH
Confidence 5788889999999999999999987632111111111111 1110 000 100000 00000000 011122222
Q ss_pred hhhhccCCCCCcCCCchhHHHHHHHhhcc-cCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHH
Q psy14413 348 CDYYFIGDSFETSVPWDKTVLLCINVKKR-LTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEI 426 (711)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei 426 (711)
.+.+..+ .+.....++.+..++..... .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus 217 ~~~i~~r--~~~~~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei 294 (470)
T 2ij2_A 217 DKIIADR--KASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEA 294 (470)
T ss_dssp HHHHHHH--HHHCCCCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHH--HhcccCchhHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 2221111 01111223444444433221 24569999999999999999999999999999999999999999999999
Q ss_pred hhh--CCCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCC-EEeCCCCEEEechhhhhcCCCCC-CCCCC
Q psy14413 427 DSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGS-YVIPQDSIILVNLWSIMRDQEHW-GDPDV 502 (711)
Q Consensus 427 ~~~--~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g-~~ip~Gt~V~~~~~~~~~d~~~~-~~p~~ 502 (711)
+++ .+.++++++.+|||++|||+|+||++|+++ .+.|.+.+|++++| |.|||||.|.++.+++||||++| +||++
T Consensus 295 ~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~-~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~ 373 (470)
T 2ij2_A 295 ARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEE 373 (470)
T ss_dssp HHHCCSSSCCHHHHHTCHHHHHHHHHHHHHSCSSC-EEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTS
T ss_pred HHHcCCCCCCHHHHhCCHHHHHHHHHHHhcCCCcc-ccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccc
Confidence 998 455899999999999999999999999999 57899999999999 99999999999999999999999 89999
Q ss_pred cccCCCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeecccCcccc
Q psy14413 503 FRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAP 582 (711)
Q Consensus 503 F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~~~~~~ 582 (711)
|+|||| + + .....+..|+|||.|+|.|+|++||.+|++++++.|+++|+++ ..+. .......+++..|.+++++
T Consensus 374 F~PeR~-~-~-~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~--~~~~~~~~~~~~p~~~~v~ 447 (470)
T 2ij2_A 374 FRPERF-E-N-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTN--YELDIKETLTLKPEGFVVK 447 (470)
T ss_dssp CCGGGG-S-S-GGGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTC--CCCCEEESSSEEETTCEEE
T ss_pred cCcccc-C-C-CCcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCC--CccccccceEecCCCeEEE
Confidence 999999 3 2 1112346799999999999999999999999999999999999 3221 1223334667777777776
Q ss_pred eeec
Q psy14413 583 GELY 586 (711)
Q Consensus 583 ~~~~ 586 (711)
++.|
T Consensus 448 ~~~R 451 (470)
T 2ij2_A 448 AKSK 451 (470)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6654
No 22
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=2.4e-41 Score=375.39 Aligned_cols=278 Identities=18% Similarity=0.203 Sum_probs=206.5
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHH-------HhCCCCCcccccccchhHHHHHHHHHHHHh
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAK-------RYGGIPAGESNGRRGYMLTYIIAYIRDFAC 348 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 348 (711)
.++++.+.+..+++++++.+.||.+++..........+..+.. .++.+............ ...+.++..
T Consensus 142 ~~~dl~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~----~~~~~~~~~ 217 (461)
T 3i3k_A 142 GEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRA----HREIKDIFY 217 (461)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHH----HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHccHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHH----HHHHHHHHH
Confidence 3477888999999999999999966432111111111111111 11111000000001111 122222222
Q ss_pred hhhccCCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhh
Q psy14413 349 DYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS 428 (711)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~ 428 (711)
+.+..+ .+.....++.+..++....+.+..+++++++..++++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus 218 ~~i~~~--~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~ 295 (461)
T 3i3k_A 218 KAIQKR--RQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKT 295 (461)
T ss_dssp HHHHHH--TTCCCCCCSHHHHHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHH--HhcccccccHHHHHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 222111 111222344555555443344556999999999999999999999999999999999999999999999999
Q ss_pred h-C---CCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcc
Q psy14413 429 L-N---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFR 504 (711)
Q Consensus 429 ~-~---~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~ 504 (711)
+ + ..++.+++.+|||++|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+
T Consensus 296 ~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~ 374 (461)
T 3i3k_A 296 VCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIM-IMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFN 374 (461)
T ss_dssp HHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCC-CEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCC
T ss_pred HhcCCCCCCCHHHHhcChHHHHHHHHHHhcCCCcc-ccccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCC
Confidence 8 2 23588999999999999999999999997 68999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCC
Q psy14413 505 PERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDE 561 (711)
Q Consensus 505 P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~ 561 (711)
||||++. .+....+..|+|||+|+|.|||++||.+|++++++.||++|+|+++++.
T Consensus 375 P~Rfl~~-~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~ 430 (461)
T 3i3k_A 375 PDRYLQD-NPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY 430 (461)
T ss_dssp GGGGGSC-CHHHHSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTC
T ss_pred CCCCCCC-CCCCCCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCC
Confidence 9999973 2222345689999999999999999999999999999999999988764
No 23
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=1.4e-40 Score=372.26 Aligned_cols=208 Identities=22% Similarity=0.284 Sum_probs=177.0
Q ss_pred CCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh-C--C----------CCChhhhcCChhHHH
Q psy14413 380 ECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL-N--K----------EPTILDRYKCPYLEA 446 (711)
Q Consensus 380 ~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~-~--~----------~~~~~~~~~lpyl~a 446 (711)
.++++++.++++.+++||+|||+++++|++++|++||++|+|+++||+++ . + .++.+++.+||||+|
T Consensus 252 ~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a 331 (491)
T 3dax_A 252 TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDS 331 (491)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCCCCHHHHHCCHHHHH
T ss_pred CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccccCHHHHhcCHHHHH
Confidence 58999999999999999999999999999999999999999999999988 1 2 248899999999999
Q ss_pred HHHHHhcCCCCCCcccceeccccccc----CCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC-------
Q psy14413 447 TIMEIMRHGNTAPIGVAHRAMKTSRL----GSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE------- 515 (711)
Q Consensus 447 ~i~E~lRl~p~~~~~~~r~~~~d~~~----~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~------- 515 (711)
||+|+||++|+ + .++|.+.+|+++ +||.|||||.|.++.+++|+||++|+||++|+||||++++...
T Consensus 332 ~i~E~lRl~p~-~-~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~ 409 (491)
T 3dax_A 332 IIKESLRLSSA-S-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCN 409 (491)
T ss_dssp HHHHHHHHHEE-E-CEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEET
T ss_pred HHHHHHhcCCC-c-cceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHcCCccccCCCcccccccccc
Confidence 99999999975 5 589999999999 7899999999999999999999999999999999999632111
Q ss_pred -CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCC-CCcccc-ccCeeecccCcccceeecccc
Q psy14413 516 -VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEP-LPAVTV-LDGVTLAPAPYKAPGELYPKQ 589 (711)
Q Consensus 516 -~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~-~~g~~~~p~~~~~~~~~~~~~ 589 (711)
...+..|+|||+|+|+|||++||.+|++++++.||++|+|+++++.. .+.... ..|+...++...+++++|.+-
T Consensus 410 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~~ 486 (491)
T 3dax_A 410 GLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKFKH 486 (491)
T ss_dssp TEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECCBSSCCEEEEEECC
T ss_pred CcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccCCCCCceEEEEecc
Confidence 12356899999999999999999999999999999999999876542 233322 246656666666666666543
No 24
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=2.1e-39 Score=361.09 Aligned_cols=221 Identities=14% Similarity=0.195 Sum_probs=169.8
Q ss_pred hhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCChh
Q psy14413 364 DKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPY 443 (711)
Q Consensus 364 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lpy 443 (711)
++.+..++....+ .+.++++++. .++.+++||+|||+++++|++++|++||++|+++++|++.....++.+++.+|||
T Consensus 234 ~d~l~~ll~~~~~-~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~lpy 311 (475)
T 3b98_A 234 QSWLGSYVKQLQD-EGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQGGKHLRLEERQKNTPV 311 (475)
T ss_dssp TSHHHHHHHHHHH-TTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC------------CCHH
T ss_pred cHHHHHHHHHHHH-cCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhcCCCCCCHHHHhcCHH
Confidence 3444444433222 2357888888 8899999999999999999999999999999999999984444578999999999
Q ss_pred HHHHHHHHhcCCCCCCcccceeccccccc-----CCEEeCCCCEEEechhh-hhcCCCCCCCCCCcccCCCCCCCCCC--
Q psy14413 444 LEATIMEIMRHGNTAPIGVAHRAMKTSRL-----GSYVIPQDSIILVNLWS-IMRDQEHWGDPDVFRPERFIHPTSGE-- 515 (711)
Q Consensus 444 l~a~i~E~lRl~p~~~~~~~r~~~~d~~~-----~g~~ip~Gt~V~~~~~~-~~~d~~~~~~p~~F~P~Rfl~~~~~~-- 515 (711)
++|||+|+||++|+ + .++|.+.+|+++ +||.|||||.|.++.++ +||||++|+||++|+||||++++...
T Consensus 312 l~a~i~E~lRl~p~-~-~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~ 389 (475)
T 3b98_A 312 FDSVLWETLRLTAA-A-LITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389 (475)
T ss_dssp HHHHHHHHHHHHEE-E-CEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSCBCC
T ss_pred HHHHHHHHHhcCCc-c-ceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCCCCCccc
Confidence 99999999999986 6 689999999999 88999999999999999 99999999999999999999632211
Q ss_pred ------CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCC-CCcccc-ccCeeecccCcccceeecc
Q psy14413 516 ------VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEP-LPAVTV-LDGVTLAPAPYKAPGELYP 587 (711)
Q Consensus 516 ------~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~-~~g~~~~p~~~~~~~~~~~ 587 (711)
...+..++|||+|+|.|+|++||.+|++++++.|+++|+++++++.. .+.... ..+....++...+++++++
T Consensus 390 ~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 469 (475)
T 3b98_A 390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRI 469 (475)
T ss_dssp CCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEE
T ss_pred cccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEEEe
Confidence 12346899999999999999999999999999999999999876642 232222 2355455444444444444
Q ss_pred c
Q psy14413 588 K 588 (711)
Q Consensus 588 ~ 588 (711)
+
T Consensus 470 R 470 (475)
T 3b98_A 470 R 470 (475)
T ss_dssp C
T ss_pred c
Confidence 4
No 25
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=2.8e-39 Score=362.43 Aligned_cols=206 Identities=19% Similarity=0.341 Sum_probs=172.4
Q ss_pred CCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---CC-------CCChhhhcCChhHHHHHH
Q psy14413 380 ECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NK-------EPTILDRYKCPYLEATIM 449 (711)
Q Consensus 380 ~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~~-------~~~~~~~~~lpyl~a~i~ 449 (711)
.++++++. .++.+++||+|||+++++|++++|++||++|+|+++|++++ .+ .++.+++.+||||+|||+
T Consensus 258 ~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~ 336 (498)
T 3b6h_A 258 VSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLS 336 (498)
T ss_dssp CCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----------CCTHHHHSCHHHHHHHH
T ss_pred CCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCcccccCHHHHhcCHHHHHHHH
Confidence 46777887 88888999999999999999999999999999999999988 22 248899999999999999
Q ss_pred HHhcCCCCCCcccceeccccccc-----CCEEeCCCCEEEechhh-hhcCCCCCCCCCCcccCCCCCCCCCC--------
Q psy14413 450 EIMRHGNTAPIGVAHRAMKTSRL-----GSYVIPQDSIILVNLWS-IMRDQEHWGDPDVFRPERFIHPTSGE-------- 515 (711)
Q Consensus 450 E~lRl~p~~~~~~~r~~~~d~~~-----~g~~ip~Gt~V~~~~~~-~~~d~~~~~~p~~F~P~Rfl~~~~~~-------- 515 (711)
|+||++|+ + .++|.+.+|+++ +||.|||||.|.++.++ +|+||++|+||++|+||||++++...
T Consensus 337 E~lRl~p~-~-~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~~ 414 (498)
T 3b6h_A 337 ESLRLTAA-P-FITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDG 414 (498)
T ss_dssp HHHHHHBC-B-CEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETT
T ss_pred HHHhccCC-C-cceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhhcCcccccCCCccccccccccc
Confidence 99999985 5 589999999988 68999999999999999 99999999999999999999632211
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCC-CCcccc-ccCeeecccCcccceeeccc
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEP-LPAVTV-LDGVTLAPAPYKAPGELYPK 588 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~-~~g~~~~p~~~~~~~~~~~~ 588 (711)
...+..++|||+|+|+|||++||.+|++++++.||++|+|+++++.. .+.... ..|....|++..++++++++
T Consensus 415 ~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 489 (498)
T 3b6h_A 415 KRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRYRIR 489 (498)
T ss_dssp EECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSCCEEEEEEC
T ss_pred ccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCCccEEEEec
Confidence 11356899999999999999999999999999999999999876532 233222 24665566666666665554
No 26
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=8.3e-39 Score=357.92 Aligned_cols=206 Identities=21% Similarity=0.282 Sum_probs=177.5
Q ss_pred CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhh---C----------CCCChhhhcCChhHH
Q psy14413 379 RECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---N----------KEPTILDRYKCPYLE 445 (711)
Q Consensus 379 ~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~---~----------~~~~~~~~~~lpyl~ 445 (711)
+.+++++++.+++.+++||+|||+++++|++++|++||++|+++++||+++ . ..++.+++.++|||+
T Consensus 251 ~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 330 (491)
T 3v8d_A 251 STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLD 330 (491)
T ss_dssp BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHH
T ss_pred CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccccccccCCHHHHhcChHHH
Confidence 368999999999999999999999999999999999999999999999988 1 246788899999999
Q ss_pred HHHHHHhcCCCCCCcccceeccccccc----CCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC------
Q psy14413 446 ATIMEIMRHGNTAPIGVAHRAMKTSRL----GSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE------ 515 (711)
Q Consensus 446 a~i~E~lRl~p~~~~~~~r~~~~d~~~----~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~------ 515 (711)
|||+|+||++|+ + .++|.+++|+++ +|+.||||+.|.++.+++|+||++|+||++|+|+||++++...
T Consensus 331 a~i~E~lRl~p~-~-~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~ 408 (491)
T 3v8d_A 331 SIIKESLRLSSA-S-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYC 408 (491)
T ss_dssp HHHHHHHHHHEE-E-CEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEE
T ss_pred HHHHHHhhcCCC-C-ccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccCcccccCCCCCccccccc
Confidence 999999999974 4 578999999999 9999999999999999999999999999999999999733221
Q ss_pred --CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCC-CCcc-ccccCeeecccCcccceeec
Q psy14413 516 --VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEP-LPAV-TVLDGVTLAPAPYKAPGELY 586 (711)
Q Consensus 516 --~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~-~~~~-~~~~g~~~~p~~~~~~~~~~ 586 (711)
...+..|+|||+|+|.|||++||.+|++++++.|+++|+|+++++.. .|.. ....|+...|+..+++++++
T Consensus 409 ~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~v~~~ 483 (491)
T 3v8d_A 409 NGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYK 483 (491)
T ss_dssp TTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBSSCCEEEEE
T ss_pred ccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCCCCeEEEEE
Confidence 12356899999999999999999999999999999999999987643 2333 33457777777777777665
No 27
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=1.6e-38 Score=347.19 Aligned_cols=271 Identities=20% Similarity=0.216 Sum_probs=193.8
Q ss_pred ccCCc-hhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccc---hhHHHHHHHHHHHHhhhhc
Q psy14413 277 QVPTQ-PNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRG---YMLTYIIAYIRDFACDYYF 352 (711)
Q Consensus 277 ~v~~~-~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~ 352 (711)
.+|+. +....+++|+|+.+ ||.+.+. ..........+..... +......... .....+..++.+.+++.
T Consensus 132 ~~d~~~~~~~~~~~~vi~~~-fG~~~~~--~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r-- 204 (411)
T 2jjn_A 132 SFDLVDVLAFPLPVTIVAEL-LGLPPMD--HEQFGDWSGALVDIQM--DDPTDPALAERIADVLNPLTAYLKARCAER-- 204 (411)
T ss_dssp EEEHHHHTTTHHHHHHHHHH-HTCCSCC--CSTTCCHHHHHHHSCC--SCTTCHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ceeHHHHHHHHHHHHHHHHH-cCCCHHH--HHHHHHHHHHHHhccC--ccccchHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 56776 45568999999998 9988652 2222223333322111 1000000000 01111122222222111
Q ss_pred cCCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCC
Q psy14413 353 IGDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKE 432 (711)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~ 432 (711)
. + .+.++.+..++.... .+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 205 --~--~--~~~~d~l~~ll~~~~-~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~----- 272 (411)
T 2jjn_A 205 --R--A--DPGDDLISRLVLAEV-DGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG----- 272 (411)
T ss_dssp --H--H--SCCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG-----
T ss_pred --H--h--CCCCCHHHHHHhccc-CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----
Confidence 1 1 123444444443322 345699999999999999999999999999999999999999999999975
Q ss_pred CChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCC
Q psy14413 433 PTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPT 512 (711)
Q Consensus 433 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~ 512 (711)
|++|||+|+||++|+++ .++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||.+
T Consensus 273 ----------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-- 339 (411)
T 2jjn_A 273 ----------RIPAIVEEVLRYRPPFP-QMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG-- 339 (411)
T ss_dssp ----------GHHHHHHHHHHHSCSSC-EEEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS--
T ss_pred ----------hHHHHHHHHhhhCCCcC-CcceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC--
Confidence 89999999999999999 69999999999999999999999999999999999999999999999853
Q ss_pred CCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHce-eeCCCCCCCCccccccCeeecccCcccceeecc
Q psy14413 513 SGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPSDEPLPAVTVLDGVTLAPAPYKAPGELYP 587 (711)
Q Consensus 513 ~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~ 587 (711)
...++|||.|+|.|+|++||++|++++++.|+++|+ ++++++..+. .........+....+.+..++
T Consensus 340 ------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~lpv~~~~~~ 407 (411)
T 2jjn_A 340 ------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDERL--RHFEQIVLGTRHLPVLAGSSP 407 (411)
T ss_dssp ------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSSCCC--CBCCSSSSSBSCCEEECSCCT
T ss_pred ------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCCcee--ccccccccCcceeEEEecCCC
Confidence 135899999999999999999999999999999995 9987432210 012233344555555544333
No 28
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-38 Score=344.12 Aligned_cols=271 Identities=15% Similarity=0.141 Sum_probs=193.6
Q ss_pred ccCCc-hhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQ-PNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~-~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+. +....+++|+|+.+ ||.+.+ +..........+......................+..++.+.+++. .
T Consensus 122 ~~d~~~~~~~~~~~~vi~~~-fG~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r----~ 194 (398)
T 2xkr_A 122 ECDFVRDLAAPLPMAVIGDM-LGVRPE--QRDMFLRWSDDLVTFLSSHVSQEDFQITMDAFAAYNDFTRATIAAR----R 194 (398)
T ss_dssp EEEHHHHTTTHHHHHHHHHH-HTCCGG--GHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CccHHHHHHHHHHHHHHHHH-hCCCHH--HHHHHHHHHHHHHhccCcccchhhHHHHHHHHHHHHHHHHHHHHHH----H
Confidence 57777 55678999999998 998865 3222333333332221110000000000011111222222222111 1
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++.... .+..+++++++.++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 195 --~--~~~~dll~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------- 261 (398)
T 2xkr_A 195 --A--DPTDDLVSVLVSSEV-DGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS-------- 261 (398)
T ss_dssp --H--SCCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG--------
T ss_pred --h--CCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------
Confidence 0 123444444443322 345699999999999999999999999999999999999999999999975
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++ .++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||..
T Consensus 262 -------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----- 328 (398)
T 2xkr_A 262 -------LLPGAIEEMLRWTAPVK-NMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN----- 328 (398)
T ss_dssp -------GHHHHHHHHHHHHCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC-----
T ss_pred -------HHHHHHHHHHhhccccc-CcceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC-----
Confidence 89999999999999999 49999999999999999999999999999999999999999999999853
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCCCCCccccccCeeecccCcccceeec
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDEPLPAVTVLDGVTLAPAPYKAPGELY 586 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~ 586 (711)
.++|||.|+|.|+|++||.+|++++++.|+++| +++++++..... ....+....+....|.+..+
T Consensus 329 -----~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~-~~~~~~~~~~~~lpv~~~p~ 394 (398)
T 2xkr_A 329 -----SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLP-LRPANFVSGLESMPVVFTPS 394 (398)
T ss_dssp -----CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCTTCCCC-BCCCSSBCCBSCCEEECCCC
T ss_pred -----CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCCcceec-ccCcccccCccceeEEecCC
Confidence 389999999999999999999999999999999 599874322100 01223444555555554433
No 29
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=2.2e-38 Score=345.72 Aligned_cols=241 Identities=18% Similarity=0.255 Sum_probs=183.8
Q ss_pred cccCCc-hhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCC-CCcccccccchhHHHHHHHHHHHHhhhhcc
Q psy14413 276 CQVPTQ-PNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGI-PAGESNGRRGYMLTYIIAYIRDFACDYYFI 353 (711)
Q Consensus 276 ~~v~~~-~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 353 (711)
..+|+. +....+++|+|+.. ||.+.+ +.. .+......+... +.. ........+..++.+.+++..
T Consensus 133 ~~vd~~~~~~~~~~~~vi~~~-~G~~~~--~~~----~~~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~i~~r~-- 199 (411)
T 3a4g_A 133 GPVDLMREYAFQIPVQVICEL-LGVPAE--DRD----DFSAWSSVLVDDSPAD----DKNAAMGKLHGYLSDLLERKR-- 199 (411)
T ss_dssp SCEEHHHHTTTTHHHHHHHHH-HTCCGG--GHH----HHHHHHHHHTTSSCTT----THHHHHHHHHHHHHHHHHHHH--
T ss_pred CCccHHHHHHHHhHHHHHHHH-hCCCHH--HHH----HHHHHHHHHhccCCHH----HHHHHHHHHHHHHHHHHHHHH--
Confidence 356765 45578999999975 998764 222 222222222221 111 111111222222222222110
Q ss_pred CCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCC
Q psy14413 354 GDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEP 433 (711)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~ 433 (711)
+ .+.++.+..++......+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 200 ----~--~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------ 267 (411)
T 3a4g_A 200 ----T--EPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS------ 267 (411)
T ss_dssp ----H--SCCSSHHHHHHHCCCTTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------
T ss_pred ----h--CCCCCHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH------
Confidence 0 1233444444433222345699999999999999999999999999999999999999999999864
Q ss_pred ChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCC
Q psy14413 434 TILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTS 513 (711)
Q Consensus 434 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~ 513 (711)
|++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 268 ---------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---- 334 (411)
T 3a4g_A 268 ---------LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA---- 334 (411)
T ss_dssp ---------GHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC----
T ss_pred ---------HHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC----
Confidence 8999999999999999978999999999999999999999999999999999999999999999983
Q ss_pred CCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 514 GEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 514 ~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++++
T Consensus 335 ------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 376 (411)
T 3a4g_A 335 ------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVG 376 (411)
T ss_dssp ------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred ------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence 2589999999999999999999999999999999 6998753
No 30
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=1.2e-38 Score=346.56 Aligned_cols=259 Identities=16% Similarity=0.151 Sum_probs=191.6
Q ss_pred ccCC-chhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPT-QPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~-~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+ .+....+++++|+. .||.+.+ +......+...+.. . ............+..++.+.+.++.+
T Consensus 131 ~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~i~~r~~------- 197 (398)
T 4fb2_A 131 EGDAATWLANEIPARLTAI-LLGLPPE--DGDTYRRWVWAITH--V-ENPEEGAEIFAELVAHARTLIAERRT------- 197 (398)
T ss_dssp EEEHCCCCCTTHHHHHHHH-HTTSCGG--GHHHHHHHHHHHHH--C-CCHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred CccHHHHHHHHHHHHHHHH-HcCCCHH--HHHHHHHHHHHHhc--C-CCHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 4564 44557899999998 6998754 33333333333322 1 00000111111122222222222211
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
.+.++.+..++.... .+..+++++++.++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 198 -----~~~~d~l~~ll~~~~-~~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-------- 263 (398)
T 4fb2_A 198 -----NPGNDIMSRVIMSKI-DGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE-------- 263 (398)
T ss_dssp -----SCCSSHHHHHHHCCB-TTBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------
T ss_pred -----CCCCCHHHHHHHccc-CCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------
Confidence 123444444443332 344699999999999999999999999999999999999999999999976
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++ ++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 264 -------~l~a~i~E~lRl~p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------ 328 (398)
T 4fb2_A 264 -------LIPNAVDELLRFYGPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTP------ 328 (398)
T ss_dssp -------GHHHHHHHHHHHHCCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCS------
T ss_pred -------HHHHHHHHHHHhCCCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCC------
Confidence 78999999999999998 899999999999999999999999999999999999999999999983
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCCCCCccccccCeeecccCccccee
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDEPLPAVTVLDGVTLAPAPYKAPGE 584 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~ 584 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++++.+. ....+....|....|++.
T Consensus 329 ----~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~---~~~~~~~~~~~~lpv~~~ 391 (398)
T 4fb2_A 329 ----NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKEC---EWLMGQVAGMLHVPIIFP 391 (398)
T ss_dssp ----CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTSCC---EEECSSBCEEEECEEECC
T ss_pred ----CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCCCc---eeccccccccceeEEEEc
Confidence 3589999999999999999999999999999999 9999866431 112244444554444443
No 31
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=1.4e-38 Score=350.47 Aligned_cols=257 Identities=17% Similarity=0.243 Sum_probs=189.1
Q ss_pred cccCCc-hhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCccc-ccccchhHHHHHHHHHHHHhhhhcc
Q psy14413 276 CQVPTQ-PNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGES-NGRRGYMLTYIIAYIRDFACDYYFI 353 (711)
Q Consensus 276 ~~v~~~-~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~ 353 (711)
..+|+. +....+++++|+. .||.+.+ +......+...+............ ..........+.+++.+.+++
T Consensus 159 ~~~dl~~~~~~~~~~~vi~~-l~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~---- 231 (441)
T 3nc3_A 159 GKSDLVNDFGKTFAVCVTMD-MLGLDKR--DHEKISEWHSGVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKE---- 231 (441)
T ss_dssp TEEECCCCCHHHHHHHHHHH-HTTCCGG--GHHHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CCCcHHHHHHHHHHHHHHHH-HcCCCHH--HHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 357764 5556799999998 5898764 333334444433333211111000 000011111222222222221
Q ss_pred CCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCC
Q psy14413 354 GDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEP 433 (711)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~ 433 (711)
+. ..+.++.+..++... ..+..+++++++.+++.+++||+|||+++++|++++|++||++|+++++|+
T Consensus 232 rr----~~~~~Dll~~Ll~~~-~~~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------- 299 (441)
T 3nc3_A 232 RR----VNPGSDLISILCTSE-YEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR------- 299 (441)
T ss_dssp HT----TSCCSSHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG-------
T ss_pred HH----hCCCCCHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------
Confidence 11 123344444444322 244579999999999999999999999999999999999999999999985
Q ss_pred ChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCC
Q psy14413 434 TILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTS 513 (711)
Q Consensus 434 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~ 513 (711)
+|++++|+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||+.+..
T Consensus 300 --------~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~ 370 (441)
T 3nc3_A 300 --------SLVPRAIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIK 370 (441)
T ss_dssp --------GGHHHHHHHHHHHSCSBCE-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGG
T ss_pred --------HHHHHHHHHhhhcCCcccC-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccc
Confidence 4999999999999999995 8999999999999999999999999999999999999999999999976333
Q ss_pred CCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 514 GEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 514 ~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
........++|||.|+|.|+|++||++|++++++.|+++| +++++++
T Consensus 371 ~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 418 (441)
T 3nc3_A 371 SAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEED 418 (441)
T ss_dssp GTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTT
T ss_pred cccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC
Confidence 3333357899999999999999999999999999999999 9998765
No 32
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=6.1e-38 Score=340.96 Aligned_cols=243 Identities=18% Similarity=0.236 Sum_probs=182.0
Q ss_pred ccCCc-hhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCc-ccccccchhHHHHHHHHHHHHhhhhccC
Q psy14413 277 QVPTQ-PNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAG-ESNGRRGYMLTYIIAYIRDFACDYYFIG 354 (711)
Q Consensus 277 ~v~~~-~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 354 (711)
.+|+. +....+++|+|+.+ ||.+.+ +......+...+...+. .... ............+..++.+.+++.
T Consensus 126 ~~dl~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~r---- 197 (397)
T 3buj_A 126 AMDVVDELAYPLALRAVLGL-LGLPAA--DWGAVGRWSRDVGRTLD-RGASAEDMRRGHAAIAEFADYVERALARR---- 197 (397)
T ss_dssp EEEHHHHTHHHHHHHHHHHH-HTCCGG--GHHHHHHHHHHHHGGGC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CeehHHHHHHHhHHHHHHHH-hCCCHH--HHHHHHHHHHHHHhhcC-CCCChHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 46665 45578999999998 998865 32223233333322221 1000 000000011111122222222111
Q ss_pred CCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCC
Q psy14413 355 DSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPT 434 (711)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~ 434 (711)
. + .+.++.+..++.... .+. ++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 198 ~--~--~~~~dll~~ll~~~~-~~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------- 264 (397)
T 3buj_A 198 R--R--EGGEDLLALMLDAHD-RGL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD------- 264 (397)
T ss_dssp H--H--HCCCSHHHHHHHHHH-TTS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-------
T ss_pred H--c--CCCCCHHHHHHHhhh-cCC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH-------
Confidence 0 0 123344444443332 223 99999999999999999999999999999999999999999999964
Q ss_pred hhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 435 ILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 435 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
|++|||+|+||++|+++ .++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 265 --------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----- 330 (397)
T 3buj_A 265 --------LLAQAVEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----- 330 (397)
T ss_dssp --------GHHHHHHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC-----
T ss_pred --------HHHHHHHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC-----
Confidence 89999999999999999 8999999999999999999999999999999999999999999999995
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.| ++| +++++++
T Consensus 331 -----~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~ 371 (397)
T 3buj_A 331 -----VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCA 371 (397)
T ss_dssp -----CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSC
T ss_pred -----CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCC
Confidence 247999999999999999999999999999 999 8998765
No 33
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=8.7e-38 Score=342.11 Aligned_cols=258 Identities=18% Similarity=0.210 Sum_probs=189.1
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
..+|+.+.+..+++|+|+.+ +|.+.+..+.......+..+...+..... ...........+..++.+.+++. .
T Consensus 130 ~~~dl~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~r----~ 202 (417)
T 1izo_A 130 DEVVLFEEAKEILCRVACYW-AGVPLKETEVKERADDFIDMVDAFGAVGP--RHWKGRRARPRAEEWIEVMIEDA----R 202 (417)
T ss_dssp SEEEHHHHHHHHHHHHHHHH-HTCCCCTTTHHHHHHHHHHHHHHTTCCSH--HHHHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CCeeHHHHHHHHHHHHHHHH-cCCCCCchHHHHHHHHHHHHHhhcccCCc--cchhHHHHHHHHHHHHHHHHHHH----H
Confidence 46888899999999999998 69987743333222333333332211000 00000011111222222222211 1
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
......+.++.+..++......+..++++++...+..++ ||++||+++++|++++|++||++|+++++|
T Consensus 203 ~~~~~~~~~d~l~~ll~~~~~~g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E---------- 271 (417)
T 1izo_A 203 AGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG---------- 271 (417)
T ss_dssp TTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC----------
T ss_pred hhccCCCcCCHHHHHHHhccccCCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc----------
Confidence 111111234444444433333445688888877776655 999999999999999999999999999987
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
++||+++||+|+||++|+++ .++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++.+
T Consensus 272 ----~~~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~--- 343 (417)
T 1izo_A 272 ----NSREREMFVQEVRRYYPFGP-FLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE--- 343 (417)
T ss_dssp ----CHHHHHHHHHHHHHHSCCCC-EEEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC---
T ss_pred ----CCHHHHHHHHHHhhcCCccc-ccceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC---
Confidence 46899999999999999999 4899999999999999999999999999999999999999999999999632
Q ss_pred CcCCCCccccCCC----CCCCccHHHHHHHHHHHHHHHHHHceeeCCCC
Q psy14413 516 VLYDETLIPFGLG----KRRCLGEPMARTSLFIFLSSLLYHFNISIPSD 560 (711)
Q Consensus 516 ~~~~~~~l~FG~G----~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 560 (711)
..+..++|||.| +|.|+|++||.+|++++++.|+++|+++++++
T Consensus 344 -~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~ 391 (417)
T 1izo_A 344 -ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQ 391 (417)
T ss_dssp -CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSC
T ss_pred -CCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCC
Confidence 135679999999 59999999999999999999999999998654
No 34
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=5.4e-38 Score=340.81 Aligned_cols=249 Identities=18% Similarity=0.250 Sum_probs=187.5
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
..+|+.+.+..+++++++...||++.+ +......++..........+..............+.+++.+.+++. .
T Consensus 125 ~~~d~~~~~~~~~~~vi~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~i~~r----r 198 (394)
T 2wiy_A 125 QVIEARRDLAVVPTHVTMARVLQLPED--DADAVMEAMFEAMLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDK----R 198 (394)
T ss_dssp CCEEHHHHHTHHHHHHHHHHHHTCCCC--CHHHHHHHHHHHHGGGSSSCCTTHHHHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CCeeHHHHHHhhhHHHHHHHHcCCCHh--HHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHHHHHHHHHHHh----h
Confidence 357888889999999999999999865 3333333322221111111110000000001112222222222211 1
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
..+.++.+..++.... ++.++++++.++++.+++||+|||+++++|++++|++||++|+++++|++
T Consensus 199 ----~~~~~dll~~Ll~~~~--~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-------- 264 (394)
T 2wiy_A 199 ----VNPGDGLADSLLDAAR--AGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES-------- 264 (394)
T ss_dssp ----HSCCSSHHHHHHHHHH--TTSSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------
T ss_pred ----cCCCCcHHHHHHHhhh--cCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH--------
Confidence 1233444444443322 23599999999999999999999999999999999999999999999864
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++++|+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||++
T Consensus 265 -------~l~a~i~E~LRl~pp~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~----- 331 (394)
T 2wiy_A 265 -------ARAAIINEMVRMDPPQL-SFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPA----- 331 (394)
T ss_dssp -------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGG-----
T ss_pred -------hHHHHHHHHHhhCCCcc-CeeEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCC-----
Confidence 79999999999999998 78999999999999999999999999999999999999999999999974
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHce-eeCCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPSD 560 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~ 560 (711)
...++|||.|+|.|+|++||++|++++++.|+++|+ ++++++
T Consensus 332 ---~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~ 374 (394)
T 2wiy_A 332 ---ASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE 374 (394)
T ss_dssp ---GSCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSC
T ss_pred ---CCCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCC
Confidence 135899999999999999999999999999999998 998753
No 35
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=3.7e-38 Score=346.69 Aligned_cols=240 Identities=18% Similarity=0.237 Sum_probs=183.5
Q ss_pred ccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+.+ ..+++|+|+. .||.+.+ +... +......+.... ...........+.+++.+.+++. .
T Consensus 161 ~vd~~~~~~~~~~~~vi~~-~~G~~~~--~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~r----~ 226 (436)
T 2cd8_A 161 RADLMESLAWPLPITVISE-LLGVPEP--DRAA----FRVWTDAFVFPD---DPAQAQTAMAEMSGYLSRLIDSK----R 226 (436)
T ss_dssp CEEHHHHTTTHHHHHHHHH-HHTCCGG--GHHH----HHHHHHHHHSCS---STTHHHHHHHHHHHHHHHHHHHH----T
T ss_pred CcchHHHHHHHHHHHHHHH-HhCCCHH--HHHH----HHHHHHHHhccC---CHHHHHHHHHHHHHHHHHHHHHH----h
Confidence 56777755 5799999997 6998754 2222 222222221111 00101111122222333222211 1
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
. .+.++.+..++......+..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 227 ~----~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~-------- 294 (436)
T 2cd8_A 227 G----QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT-------- 294 (436)
T ss_dssp T----SCCCSHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------
T ss_pred c----CCCCCHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh--------
Confidence 1 1234454444443333355799999999999999999999999999999999999999999999863
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||-
T Consensus 295 -------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------ 361 (436)
T 2cd8_A 295 -------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT------ 361 (436)
T ss_dssp -------GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC------
T ss_pred -------hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC------
Confidence 7999999999999999978999999999999999999999999999999999999999999999961
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~ 559 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++.
T Consensus 362 ----~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~ 402 (436)
T 2cd8_A 362 ----AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDV 402 (436)
T ss_dssp ----TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCS
T ss_pred ----CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecC
Confidence 3689999999999999999999999999999999 699864
No 36
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=4e-38 Score=342.36 Aligned_cols=174 Identities=22% Similarity=0.300 Sum_probs=158.0
Q ss_pred chhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCCh
Q psy14413 363 WDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCP 442 (711)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lp 442 (711)
.++.+..++... ..+.++++++++.+++.+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 202 ~~d~l~~ll~~~-~~~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 265 (396)
T 3oft_A 202 GDDLFSRILSEP-VGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD--------------- 265 (396)
T ss_dssp CSSHHHHHHTSC-BTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------
T ss_pred CCCHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------
Confidence 345555444433 2445699999999999999999999999999999999999999999999976
Q ss_pred hHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCc
Q psy14413 443 YLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETL 522 (711)
Q Consensus 443 yl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~ 522 (711)
|++|+|+|+||++|++ .++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||++ +..+
T Consensus 266 ~l~a~i~E~lRl~p~~--~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~--------~~~~ 335 (396)
T 3oft_A 266 LIPAAADELMRRYPTV--AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA--------PIRH 335 (396)
T ss_dssp GHHHHHHHHHHHCCCB--EEEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC--------GGGS
T ss_pred hHHHHHHHHHHhcCcc--cCceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC--------CCCc
Confidence 8999999999999999 68999999999999999999999999999999999999999999999975 3468
Q ss_pred cccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCCC
Q psy14413 523 IPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDEP 562 (711)
Q Consensus 523 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~ 562 (711)
+|||.|+|.|+|++||.+|++++++.|+++| +++++++.+
T Consensus 336 ~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~ 376 (396)
T 3oft_A 336 TTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKA 376 (396)
T ss_dssp STTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSC
T ss_pred ccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCCC
Confidence 9999999999999999999999999999999 999986543
No 37
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=1e-37 Score=342.03 Aligned_cols=246 Identities=22% Similarity=0.207 Sum_probs=183.2
Q ss_pred ccCCch-hHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQP-NLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~-~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+ ....+++|+|+.+ ||.+.+ +..........+...+...+.. . ...... ......+.++..+.+..+
T Consensus 145 ~~dl~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~~~~~i~~r- 217 (425)
T 2z3t_A 145 RPDLVEGFAAPLPILVISAL-LGIPEE--DHTWLRANAVALQEASTTRARD-G-RGYARA-EAASQEFTRYFRREVDRR- 217 (425)
T ss_dssp SCBHHHHTTTHHHHHHHHHH-HTCCGG--GHHHHHHHHHHHHTTCTTCCC-----HHHHH-HHHHHHHHHHHHHHHCC--
T ss_pred CccHHHHHHHHHHHHHHHHH-hCCCHH--HHHHHHHHHHHHHhhccccCCC-H-HHHHHH-HHHHHHHHHHHHHHHHHH-
Confidence 577765 4578999999998 998865 2222222222222111100100 0 000011 111122333333332211
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
.+ .+.++.+..++.... .+..+++++++.++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 218 -~~--~~~~dll~~ll~~~~-~~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------- 285 (425)
T 2z3t_A 218 -GG--DDRDDLLTLLVRARD-TGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE-------- 285 (425)
T ss_dssp ---------CHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG--------
T ss_pred -Hh--CCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH--------
Confidence 11 233444444443332 345799999999999999999999999999999999999999999999964
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++ .++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 286 -------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------ 351 (425)
T 2z3t_A 286 -------STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA------ 351 (425)
T ss_dssp -------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS------
T ss_pred -------hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC------
Confidence 89999999999999999 8999999999999999999999999999999999999999999999995
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++ +++
T Consensus 352 ----~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~ 392 (425)
T 2z3t_A 352 ----ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGA 392 (425)
T ss_dssp ----SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSC
T ss_pred ----CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCC
Confidence 2579999999999999999999999999999999 899 654
No 38
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=1.2e-37 Score=339.56 Aligned_cols=244 Identities=21% Similarity=0.280 Sum_probs=181.1
Q ss_pred ccCCc-hhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcc-cccccchhHHHHHHHHHHHHhhhhccC
Q psy14413 277 QVPTQ-PNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGE-SNGRRGYMLTYIIAYIRDFACDYYFIG 354 (711)
Q Consensus 277 ~v~~~-~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 354 (711)
.+|+. +....+++++|+.+ ||.+.+ +......+...+...+. .+... ...........+.+++.+.+++.
T Consensus 127 ~~d~~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~i~~r---- 198 (404)
T 3ejb_B 127 KMEVISDFAFPLASFVIANI-IGVPEE--DREQLKEWAASLIQTID-FTRSRKALTEGNIMAVQAMAYFKELIQKR---- 198 (404)
T ss_dssp EEEHHHHTHHHHHHHHHHHH-HTCCGG--GHHHHHHHHHHHHGGGS-TTCCHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CcchHHHHHHHHHHHHHHHH-cCCCHH--HHHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 46654 44556889999885 898754 33333333333332222 11110 00000111112222222222211
Q ss_pred CCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCC
Q psy14413 355 DSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPT 434 (711)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~ 434 (711)
. ..+.++.+..++ ....+..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 199 ~----~~~~~d~l~~ll--~~~~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------- 265 (404)
T 3ejb_B 199 K----RHPQQDMISMLL--KGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD------- 265 (404)
T ss_dssp H----HSCCSSHHHHHH--HC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------
T ss_pred H----hCCcchHHHHHH--hcccCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------
Confidence 1 122344444444 333455799999999999999999999999999999999999999999999975
Q ss_pred hhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 435 ILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 435 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
|++++|+|+||++|+++ .++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 266 --------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~----- 331 (404)
T 3ejb_B 266 --------LIGTAVEECLRYESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP----- 331 (404)
T ss_dssp --------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS-----
T ss_pred --------HHHHHHHHHHHhCCccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC-----
Confidence 79999999999999999 8999999999999999999999999999999999999999999999982
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++++
T Consensus 332 -----~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 373 (404)
T 3ejb_B 332 -----NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADF 373 (404)
T ss_dssp -----CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--
T ss_pred -----CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCC
Confidence 2479999999999999999999999999999999 9998753
No 39
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=8.5e-38 Score=341.26 Aligned_cols=239 Identities=20% Similarity=0.256 Sum_probs=182.6
Q ss_pred cccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCccc-ccccchhHHHHHHHHHHHHhhhhcc
Q psy14413 276 CQVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGES-NGRRGYMLTYIIAYIRDFACDYYFI 353 (711)
Q Consensus 276 ~~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~ 353 (711)
..+|+.+.+ ..+++++|+. .||.+.+ +......+ ...+........ ..........+.+++.+.+++.
T Consensus 152 ~~~dl~~~~~~~~~~~vi~~-l~G~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r--- 221 (415)
T 3mgx_A 152 EVCDAATAIGPRIPAAVVCE-ILGVPAE--DEDMLIDL----TNHAFGGEDELFDGMTPRQAHTEILVYFDELITAR--- 221 (415)
T ss_dssp SCEESTTTTTTHHHHHHHHH-HHTCCGG--GHHHHHHH----HHHHTSCCC----CCCHHHHHHHHHHHHHHHHHHH---
T ss_pred CCcchHHHHHHHHHHHHHHH-HcCCCHH--HHHHHHHH----HHHHHcccCcccchHHHHHHHHHHHHHHHHHHHHH---
Confidence 467888766 6799999998 5897643 33322223 222221111000 0001111222222232222211
Q ss_pred CCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCC
Q psy14413 354 GDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEP 433 (711)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~ 433 (711)
. ..+.++.+..++... .+++++++.++..+++||+|||+++++|++++|++||++|+|+++|+
T Consensus 222 -r----~~~~~dll~~ll~~~-----~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------- 284 (415)
T 3mgx_A 222 -R----KEPGDDLVSTLVTDD-----DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS------- 284 (415)
T ss_dssp -H----HSCCSSHHHHHHHCT-----TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS-------
T ss_pred -H----hCCCCCHHHHHHhCC-----CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh-------
Confidence 0 012344444444322 79999999999999999999999999999999999999999999985
Q ss_pred ChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCC
Q psy14413 434 TILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTS 513 (711)
Q Consensus 434 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~ 513 (711)
+|++++|+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 285 --------~~l~a~i~E~LRl~pp~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~---- 351 (415)
T 3mgx_A 285 --------ADVDTVVEEVLRWTSPAM-HVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP---- 351 (415)
T ss_dssp --------SCHHHHHHHHHHHHCCBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----
T ss_pred --------HhHHHHHHHHHHhcCccc-ccceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC----
Confidence 699999999999999999 7899999999999999999999999999999999999999999999973
Q ss_pred CCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 514 GEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 514 ~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++++
T Consensus 352 ------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 393 (415)
T 3mgx_A 352 ------NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLERE 393 (415)
T ss_dssp ------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSC
T ss_pred ------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCC
Confidence 2589999999999999999999999999999999 8998744
No 40
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=7.4e-38 Score=341.87 Aligned_cols=238 Identities=18% Similarity=0.187 Sum_probs=182.4
Q ss_pred ccCCchh-HHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPN-LKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~-~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+. ...+++++|+.+ ||.+.+ +..........+.... .|. . .......+..++.+.+++...
T Consensus 148 ~~d~~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~~~~~~~~~--~P~-~----~~~~~~~~~~~~~~~i~~r~~--- 214 (415)
T 2zwu_A 148 QCNFTEDYAEPFPIRIFMLL-AGLPEE--DIPHLKYLTDQMTRPD--GSM-T----FAEAKEALYDYLIPIIEQRRQ--- 214 (415)
T ss_dssp EEEHHHHTTTHHHHHHHHHH-HTCCGG--GHHHHHHHHHHHHSCC--SSS-C----HHHHHHHHHHHHHHHHHHHHH---
T ss_pred CccHHHHHHHHHHHHHHHHH-cCCCHH--HHHHHHHHHHHHHhcc--CHH-H----HHHHHHHHHHHHHHHHHHHHh---
Confidence 4777764 578999999998 998865 2222222222221110 011 1 111122222233222221110
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
.+.++.+..++... ..+..+++++++.++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 215 -----~~~~dll~~ll~~~-~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------- 280 (415)
T 2zwu_A 215 -----KPGTDAISIVANGQ-VNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE-------- 280 (415)
T ss_dssp -----SCCSSHHHHHHTCE-ETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG--------
T ss_pred -----CCCCCHHHHHHHhh-hcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------
Confidence 12334444444332 2334599999999999999999999999999999999999999999999964
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|+|+|+||++|+++ .+ |.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||-
T Consensus 281 -------~l~a~i~E~lRl~p~~~-~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------ 345 (415)
T 2zwu_A 281 -------RIPAACEELLRRFSLVA-DG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK------ 345 (415)
T ss_dssp -------GHHHHHHHHHHHTCCBC-CE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCSS------
T ss_pred -------HHHHHHHHHHhhcCCcC-Cc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCCC------
Confidence 89999999999999999 68 9999999999999999999999999999999999999999999951
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHce-eeCCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPSD 560 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~ 560 (711)
..++|||.|+|.|+|++||.+|++++++.|+++|+ ++++++
T Consensus 346 ----~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 387 (415)
T 2zwu_A 346 ----VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG 387 (415)
T ss_dssp ----CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTT
T ss_pred ----CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCC
Confidence 35899999999999999999999999999999998 998763
No 41
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=1.4e-37 Score=337.82 Aligned_cols=243 Identities=17% Similarity=0.228 Sum_probs=185.2
Q ss_pred cccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccC
Q psy14413 276 CQVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIG 354 (711)
Q Consensus 276 ~~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 354 (711)
..+|+.+.+ ..+++|+|+. .||.+.+ +.. .+......+........ . ....+. ...+ ++..+.+.
T Consensus 129 ~~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~~----~~~~~~~~~~~~~~~~p--~-~~~~~~-~~~~-~~~~~~i~-- 194 (396)
T 1n40_A 129 APADLRNDFADPLATALHCK-VLGIPQE--DGP----KLFRSLSIAFMSSADPI--P-AAKINW-DRDI-EYMAGILE-- 194 (396)
T ss_dssp SCEETTTTTHHHHHHHHHHH-HHTCCGG--GHH----HHHHTHHHHTBCCSSCC--H-HHHHHH-HHHH-HHHHHHHH--
T ss_pred CCccHHHHHHHHhHHHHHHH-HhCCChh--hHH----HHHHHHHHHhccccCCC--H-HHHHHH-HHHH-HHHHHHHh--
Confidence 357777555 5899999998 7998864 222 22222222221111000 0 111111 1122 33333322
Q ss_pred CCCCcCCCchhHHHHHHHhhcc-cCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCC
Q psy14413 355 DSFETSVPWDKTVLLCINVKKR-LTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEP 433 (711)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~ 433 (711)
+.. ..++.+..++..... .+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 195 ---~~~-~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------ 264 (396)
T 1n40_A 195 ---NPN-ITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------ 264 (396)
T ss_dssp ---CTT-CCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------
T ss_pred ---CCC-CCCCHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH------
Confidence 111 123444444433312 345799999999999999999999999999999999999999999999864
Q ss_pred ChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCC
Q psy14413 434 TILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTS 513 (711)
Q Consensus 434 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~ 513 (711)
|++|||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||.+
T Consensus 265 ---------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~--- 332 (396)
T 1n40_A 265 ---------LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP--- 332 (396)
T ss_dssp ---------GHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---
T ss_pred ---------HHHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---
Confidence 89999999999999999789999999999999999999999999999999999999999999999963
Q ss_pred CCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 514 GEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 514 ~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++++
T Consensus 333 ------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 374 (396)
T 1n40_A 333 ------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVP 374 (396)
T ss_dssp ------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred ------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCC
Confidence 3589999999999999999999999999999999 5998654
No 42
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=5.4e-38 Score=344.80 Aligned_cols=170 Identities=23% Similarity=0.326 Sum_probs=154.0
Q ss_pred chhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCCh
Q psy14413 363 WDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCP 442 (711)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lp 442 (711)
.++.+..++... ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 235 ~~dll~~ll~~~-~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 298 (428)
T 1cpt_A 235 KDDVMSLLANSK-LDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA--------------- 298 (428)
T ss_dssp CSSHHHHHHHCB-SSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------
T ss_pred CCcHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH---------------
Confidence 344444444332 2344699999999999999999999999999999999999999999999975
Q ss_pred hHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCc
Q psy14413 443 YLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETL 522 (711)
Q Consensus 443 yl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~ 522 (711)
|++|||+|+||++|+++ .++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||.+ .+
T Consensus 299 ~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------~~ 367 (428)
T 1cpt_A 299 LIPRLVDEAVRWTAPVK-SFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN----------RH 367 (428)
T ss_dssp GHHHHHHHHHHHHCCBC-CCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCCSC----------CC
T ss_pred HHHHHHHHHHHhCCccc-ccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCCCCC----------CC
Confidence 89999999999999999 68999999999999999999999999999999999999999999999952 38
Q ss_pred cccCCCCCCCccHHHHHHHHHHHHHHHHHHce-eeCCC
Q psy14413 523 IPFGLGKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPS 559 (711)
Q Consensus 523 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~ 559 (711)
+|||.|+|.|+|++||++|++++++.|+++|+ +++++
T Consensus 368 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 405 (428)
T 1cpt_A 368 LGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG 405 (428)
T ss_dssp CTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESS
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCC
Confidence 99999999999999999999999999999997 88763
No 43
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=4e-38 Score=343.27 Aligned_cols=238 Identities=21% Similarity=0.256 Sum_probs=181.0
Q ss_pred ccCCchhHHH-HHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNLKK-YLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~~~-~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+.+.. +++|+|+. .||.+.+ +. +.+......+..... ...........+..++.+.+++. .
T Consensus 145 ~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~r----~ 211 (406)
T 1ued_A 145 SADLQGLFADPVGAHALCE-LLGIPRD--DQ----REFVRRIRRNADLSR--GLKARAADSAAFNRYLDNLLARQ----R 211 (406)
T ss_dssp TEEHHHHTHHHHHHHHHHH-HHTCCHH--HH----HHHHHHHHHCC---C--CHHHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CeeHHHHHHHHhHHHHHHH-HcCCCHH--HH----HHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHH----H
Confidence 5777776764 99999984 7998742 22 223333333221100 00000111112222222222211 0
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++... +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 212 --~--~~~~d~l~~ll~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-------- 276 (406)
T 1ued_A 212 --A--DPDDGLLGMIVRDH---GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE-------- 276 (406)
T ss_dssp --H--SCCSSHHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH--------
T ss_pred --h--CCCCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH--------
Confidence 0 12234444444332 34689999999999999999999999999999999999999999999875
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||-
T Consensus 277 -------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------ 343 (406)
T 1ued_A 277 -------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAA------ 343 (406)
T ss_dssp -------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------
T ss_pred -------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCCC------
Confidence 7999999999999999977999999999999999999999999999999999999999999999982
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~ 559 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++.
T Consensus 344 ----~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~ 384 (406)
T 1ued_A 344 ----VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAV 384 (406)
T ss_dssp ----CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred ----CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecC
Confidence 3589999999999999999999999999999999 799864
No 44
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=1.7e-37 Score=338.35 Aligned_cols=239 Identities=19% Similarity=0.230 Sum_probs=182.7
Q ss_pred ccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+...+ ..+++|+|+. .||.+.+ +......+...+...... . .........+..++.+.+++ +.
T Consensus 141 ~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~~----r~ 207 (406)
T 1s1f_A 141 PADLTEAVLSPFPIAVICE-LMGVPAT--DRHSMHTWTQLILSSSHG--A----EVSERAKNEMNAYFSDLIGL----RS 207 (406)
T ss_dssp SEEHHHHTTTHHHHHHHHH-HHTCCGG--GHHHHHHHHHHHHHHHTT--C----CCCHHHHTHHHHHHHHHHHT----SC
T ss_pred CccHHHHHhhHhHHHHHHH-HhCCCHH--HHHHHHHHHHHHHhccCC--H----HHHHHHHHHHHHHHHHHHHH----HH
Confidence 56766444 5799999988 5998865 322233333333222211 1 11111222223333332221 11
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++....+ ..++++++..++.++++|| |||+++++|++++|++||++|+|+++|++
T Consensus 208 --~--~~~~d~l~~ll~~~~~--~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------- 272 (406)
T 1s1f_A 208 --D--SAGEDVTSLLGAAVGR--DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE-------- 272 (406)
T ss_dssp --C--SCCCSHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG--------
T ss_pred --h--CCCCCHHHHHHHhhcc--cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------
Confidence 1 1234554444443322 6799999999999999999 99999999999999999999999999975
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCC-cccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAP-IGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~-~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
|++|||+|+||++|+++ ..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||..
T Consensus 273 -------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---- 341 (406)
T 1s1f_A 273 -------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPN---- 341 (406)
T ss_dssp -------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC--C----
T ss_pred -------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCCC----
Confidence 79999999999999999 679999999999999999999999999999999999999999999999952
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
.++|||.|+|.|+|++||.+|++++++.|+++| +++++++
T Consensus 342 ------~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 382 (406)
T 1s1f_A 342 ------PHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVA 382 (406)
T ss_dssp ------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred ------CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCC
Confidence 479999999999999999999999999999999 7998765
No 45
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=7.4e-38 Score=340.84 Aligned_cols=241 Identities=16% Similarity=0.222 Sum_probs=182.4
Q ss_pred ccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+.+ ..+++|+|+. .||.+.+ +.. .+......+....... .........+..++.+.+++. .
T Consensus 135 ~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~~----~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~i~~r----~ 201 (403)
T 3aba_A 135 PVDLVKTFANAVPSMVISD-LFGVPVE--RRA----EFQDIAEAMMRVDQDA--AATEAAGMRLGGLLYQLVQER----R 201 (403)
T ss_dssp CEEHHHHTTTHHHHHHHHH-HHTCCGG--GHH----HHHHHHHHHSBSSSCH--HHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CccHHHHHHHHHHHHHHHH-HcCCCHH--HHH----HHHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHHH----H
Confidence 46766544 5799999997 6998754 222 2333333332111100 000111112222222222211 0
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++... ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 202 --~--~~~~dll~~ll~~~-~~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------- 268 (403)
T 3aba_A 202 --A--NPGDDLISALITTE-DPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS-------- 268 (403)
T ss_dssp --H--SCCSSHHHHHHTSC-CTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG--------
T ss_pred --h--CCCCCHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------
Confidence 0 12234444444332 2345799999999999999999999999999999999999999999999864
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 269 -------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~------ 335 (403)
T 3aba_A 269 -------LVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP------ 335 (403)
T ss_dssp -------GHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------
T ss_pred -------HHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC------
Confidence 8999999999999999978999999999999999999999999999999999999999999999983
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++.+
T Consensus 336 ----~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 377 (403)
T 3aba_A 336 ----APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377 (403)
T ss_dssp ----CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred ----CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCC
Confidence 2589999999999999999999999999999999 5888654
No 46
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=3.3e-37 Score=337.54 Aligned_cols=247 Identities=18% Similarity=0.265 Sum_probs=185.1
Q ss_pred ccCCch-hHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCC--CCCcccc-cccchhHHHHHHHHHHHHhhhhc
Q psy14413 277 QVPTQP-NLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGG--IPAGESN-GRRGYMLTYIIAYIRDFACDYYF 352 (711)
Q Consensus 277 ~v~~~~-~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 352 (711)
.+|+.. ....+++|+|+.+ ||.+.+ +..........+...... .|..... .........+..++.+.+++.
T Consensus 142 ~~d~~~~~~~~~~~~vi~~~-fG~~~~--~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r-- 216 (419)
T 1q5d_A 142 EFDVVRDYAEGIPMRAISAL-LKVPAE--CDEKFRRFGSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDER-- 216 (419)
T ss_dssp CEETTTTTGGGSHHHHHHHH-TTCCGG--GHHHHHHHHHHHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHHHHH-hCCCHH--HHHHHHHHHHHHHHhcccccccCChHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 567764 5588999999998 998865 222222222222222111 1110000 000111112222222222211
Q ss_pred cCCCCCcCCCch-hHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCC
Q psy14413 353 IGDSFETSVPWD-KTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNK 431 (711)
Q Consensus 353 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~ 431 (711)
. + .+.+ +.+..++... ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 217 --~--~--~~~~~dll~~ll~~~-~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---- 285 (419)
T 1q5d_A 217 --R--R--NPLENDVLTMLLQAE-ADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG---- 285 (419)
T ss_dssp --H--H--SCCSSCHHHHHHHHH-HSSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----
T ss_pred --H--h--CCCCCCHHHHHHhhh-ccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH----
Confidence 0 0 1223 4444444332 2345799999999999999999999999999999999999999999999853
Q ss_pred CCChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCC
Q psy14413 432 EPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHP 511 (711)
Q Consensus 432 ~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~ 511 (711)
|++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+|||+-
T Consensus 286 -----------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-- 352 (419)
T 1q5d_A 286 -----------LMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT-- 352 (419)
T ss_dssp -----------GHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC--
T ss_pred -----------HHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCC--
Confidence 8999999999999999978999999999999999999999999999999999999999999999941
Q ss_pred CCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 512 TSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 512 ~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++++
T Consensus 353 --------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 394 (419)
T 1q5d_A 353 --------SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKET 394 (419)
T ss_dssp --------TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred --------CCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCC
Confidence 3589999999999999999999999999999999 8998764
No 47
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=2.7e-37 Score=336.69 Aligned_cols=243 Identities=16% Similarity=0.230 Sum_probs=183.2
Q ss_pred ccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCCC
Q psy14413 277 QVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 356 (711)
Q Consensus 277 ~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 356 (711)
.+|+.+.+...+.++++...||.+.+.. . .+......+..... ...........+..++.+.+++. .
T Consensus 138 ~~d~~~~~~~~~~~~i~~~~~G~~~~~~--~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~r----~- 204 (404)
T 1jfb_A 138 PVDLVKEFALPVPSYIIYTLLGVPFNDL--E----YLTQQNAIRTNGSS--TAREASAANQELLDYLAILVEQR----L- 204 (404)
T ss_dssp CEEHHHHTTTHHHHHHHHHHHTCCGGGH--H----HHHHHHHHHHCTTS--CHHHHHHHHHHHHHHHHHHHHHH----H-
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCHHHH--H----HHHHHHHHHhccCc--chHHHHHHHHHHHHHHHHHHHHH----H-
Confidence 3666777778888889999999886521 1 11111111111100 00000011111222222222211 0
Q ss_pred CCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChh
Q psy14413 357 FETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTIL 436 (711)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~ 436 (711)
+ .+.++.+..++... ..+..++++++..++..+++||+|||+++++|++++|++||++|+|++++
T Consensus 205 -~--~~~~d~l~~ll~~~-~~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~----------- 269 (404)
T 1jfb_A 205 -V--EPKDDIISKLCTEQ-VKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN----------- 269 (404)
T ss_dssp -H--SCCSSHHHHHHHHT-TTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-----------
T ss_pred -h--CCCCcHHHHHHHhh-ccCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-----------
Confidence 0 12234444444322 23456999999999999999999999999999999999999999999982
Q ss_pred hhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCC
Q psy14413 437 DRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEV 516 (711)
Q Consensus 437 ~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~ 516 (711)
.+|++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||+++
T Consensus 270 ----~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~----- 340 (404)
T 1jfb_A 270 ----PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP----- 340 (404)
T ss_dssp ----GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS-----
T ss_pred ----hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC-----
Confidence 36999999999999999997799999999999999999999999999999999999999999999999752
Q ss_pred cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCC
Q psy14413 517 LYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559 (711)
Q Consensus 517 ~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~ 559 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++.
T Consensus 341 ---~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~ 381 (404)
T 1jfb_A 341 ---QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAV 381 (404)
T ss_dssp ---SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred ---CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecC
Confidence 2489999999999999999999999999999999 799864
No 48
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=5.8e-38 Score=342.76 Aligned_cols=241 Identities=17% Similarity=0.216 Sum_probs=183.1
Q ss_pred ccCCc-hhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHH-hCCCCCcccccccchhHHHHHHHHHHHHhhhhccC
Q psy14413 277 QVPTQ-PNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKR-YGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIG 354 (711)
Q Consensus 277 ~v~~~-~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 354 (711)
.+|+. +.+..+++|+|+. .||.+.+ +......+...+... +. .+... ........+..++.+.+++.
T Consensus 143 ~vdl~~~~~~~~~~~vi~~-~~G~~~~--~~~~~~~~~~~~~~~~~~-~p~~~---~~~~~~~~~~~~~~~~i~~r---- 211 (414)
T 2uuq_A 143 GGDIVTELFKPLPSMVVAH-YLGVPEE--DWTQFDGWTQAIVAANAV-DGATT---GALDAVGSMMAYFTGLIERR---- 211 (414)
T ss_dssp EEEHHHHTTTHHHHHHHHH-HTTCCGG--GHHHHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHH----
T ss_pred CccHHHHHHHHhHHHHHHH-HhCCCHH--HHHHHHHHHHHHHhhccc-CCchh---HHHHHHHHHHHHHHHHHHHH----
Confidence 47775 5678999999998 6998865 222222222222221 11 01100 11112222233333322211
Q ss_pred CCCCcCCCchhHHHHHHHhhcc-cCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCC
Q psy14413 355 DSFETSVPWDKTVLLCINVKKR-LTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEP 433 (711)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~ 433 (711)
. + .+.++.+..++..... .+..+++++++.++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 212 ~--~--~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------ 281 (414)
T 2uuq_A 212 R--T--EPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPE------ 281 (414)
T ss_dssp T--T--SCCSSHHHHHHHTTTTCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------
T ss_pred H--h--CCCCCHHHHHHhcccccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------
Confidence 1 1 1234444444433221 334589999999999999999999999999999999999999999999863
Q ss_pred ChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCC-CCCCCcccCCCCCCC
Q psy14413 434 TILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW-GDPDVFRPERFIHPT 512 (711)
Q Consensus 434 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~ 512 (711)
|++|||+|+||++|+++ .++|.+++|++++|+.|||||.|.++.+++||||++| +||++|+||||..
T Consensus 282 ---------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~~-- 349 (414)
T 2uuq_A 282 ---------GIPDAVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPR-- 349 (414)
T ss_dssp ---------GHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCCC--
T ss_pred ---------HHHHHHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCCC--
Confidence 89999999999999999 8999999999999999999999999999999999999 8999999999852
Q ss_pred CCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCC
Q psy14413 513 SGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIP 558 (711)
Q Consensus 513 ~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~ 558 (711)
.++|||.|+|.|+|++||.+|++++++.|+++| +++++
T Consensus 350 --------~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~ 388 (414)
T 2uuq_A 350 --------NILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVA 388 (414)
T ss_dssp --------SCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEEC
T ss_pred --------CCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEEC
Confidence 479999999999999999999999999999999 69987
No 49
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=2.1e-37 Score=337.40 Aligned_cols=242 Identities=21% Similarity=0.241 Sum_probs=181.9
Q ss_pred ccCCch-hHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQP-NLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~-~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+ ....+++|+|+.+ ||.+.+ +......+...+.. ...+ . ..........+..++.+.+++. .
T Consensus 137 ~~d~~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~~~~~~~--~~~p-~--~~~~~~~~~~~~~~~~~~i~~r----~ 204 (404)
T 1z8o_A 137 VVDIVDRFAHPLPIKVICEL-LGVDEK--YRGEFGRWSSEILV--MDPE-R--AEQRGQAAREVVNFILDLVERR----R 204 (404)
T ss_dssp EEEHHHHTTTHHHHHHHHHH-TTCCGG--GTTTHHHHHHHHHC--CCGG-G--HHHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CcchHHHHhHHHHHHHHHHH-hCCCHH--HHHHHHHHHHHHhc--cCCh-h--HHHHHHHHHHHHHHHHHHHHHH----H
Confidence 467765 4468999999985 998754 32223233222222 1111 0 0000011112222222222211 0
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++......+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 205 --~--~~~~dll~~ll~~~~~~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-------- 272 (404)
T 1z8o_A 205 --T--EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS-------- 272 (404)
T ss_dssp --H--SCCSSHHHHHHHCEETTTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------
T ss_pred --h--CCCCCHHHHHHhhhcccCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------
Confidence 0 1233444444433122334699999999999999999999999999999999999999999999864
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++ .++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 273 -------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~------ 338 (404)
T 1z8o_A 273 -------ALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT------ 338 (404)
T ss_dssp -------GHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC------
T ss_pred -------hHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC------
Confidence 79999999999999999 8999999999999999999999999999999999999999999999984
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++++
T Consensus 339 ----~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 380 (404)
T 1z8o_A 339 ----RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGID 380 (404)
T ss_dssp ----TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred ----CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCC
Confidence 2589999999999999999999999999999999 5888653
No 50
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=1.2e-37 Score=337.72 Aligned_cols=258 Identities=22% Similarity=0.239 Sum_probs=191.6
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCC--CCCcccccc-cchhHHHHHHHHHHHHhhhhc
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGG--IPAGESNGR-RGYMLTYIIAYIRDFACDYYF 352 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~ 352 (711)
..+|+.+.++++++|+|+.++||.+.+. .....+..+...... ......... ...-.......+.++..+.+.
T Consensus 124 ~~~dl~~~~~~~~~~vi~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~ 199 (389)
T 1n97_A 124 EERDLDHEMLALSLRLLGRALFGKPLSP----SLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIV 199 (389)
T ss_dssp CCEEHHHHHHHHHHHHHHHHHHSSCCCH----HHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTT
T ss_pred CcCcHHHHHHHHHHHHHHHHHcCCcchH----HHHHHHHHHHHHHHHHHhhHHHhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence 3578889999999999999999999872 222222222111100 000000000 000000111122222222211
Q ss_pred cCCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCC
Q psy14413 353 IGDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKE 432 (711)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~ 432 (711)
++ ++ .+++++++..++.++++||+|||+++++|++++|++||++|+|+++|++.+.
T Consensus 200 --~r-------------ll-------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~-- 255 (389)
T 1n97_A 200 --HP-------------PL-------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-- 255 (389)
T ss_dssp --ST-------------TG-------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH--
T ss_pred --HH-------------hc-------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH--
Confidence 11 01 3589999999999999999999999999999999999999999999998642
Q ss_pred CChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCC
Q psy14413 433 PTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPT 512 (711)
Q Consensus 433 ~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~ 512 (711)
|||+|+||++|+++. ++|.+.+|++++|+.|||||.|.++.+++||| +|+||++|+||||+++
T Consensus 256 -------------a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~- 318 (389)
T 1n97_A 256 -------------AAFQEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEE- 318 (389)
T ss_dssp -------------HHHHHHHHHSCSSCC-EEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHS-
T ss_pred -------------HHHHHHHhcCCCccc-cceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCC-
Confidence 999999999999995 69999999999999999999999999999999 9999999999999863
Q ss_pred CCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCCCCCCccccccCeeeccc-Ccccceee
Q psy14413 513 SGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPA-PYKAPGEL 585 (711)
Q Consensus 513 ~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~g~~~~p~-~~~~~~~~ 585 (711)
....+..++|||.|+|.|+|++||.+|++++++.|+++|+++++++.+ + ..+++..|. +++++++.
T Consensus 319 --~~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~----~~~~~~~p~~~~~v~~~~ 385 (389)
T 1n97_A 319 --RGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR-V----LAQVTLRPEGGLPARPRE 385 (389)
T ss_dssp --CCCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCC-E----EESSSEEETTCCEECCBC
T ss_pred --CCCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCc-c----cceEEeeeCCCceEEEee
Confidence 112356899999999999999999999999999999999999876543 2 345556665 56655543
No 51
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.1e-37 Score=344.21 Aligned_cols=171 Identities=21% Similarity=0.311 Sum_probs=154.0
Q ss_pred chhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCCh
Q psy14413 363 WDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCP 442 (711)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lp 442 (711)
.++.+..++... ..+..+++++++.+++.+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 257 ~~dll~~ll~~~-~~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 320 (450)
T 3tkt_A 257 TDDVATVIANAV-VDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN--------------- 320 (450)
T ss_dssp CSSHHHHHHTCE-ETTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG---------------
T ss_pred CCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH---------------
Confidence 445544444332 2344699999999999999999999999999999999999999999999974
Q ss_pred hHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCc
Q psy14413 443 YLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETL 522 (711)
Q Consensus 443 yl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~ 522 (711)
|++++|+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|||+. ..+
T Consensus 321 ~l~a~i~E~LRl~pp~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~----------~~~ 389 (450)
T 3tkt_A 321 LLPGIVEEAIRWTTPVQ-HFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA----------NRH 389 (450)
T ss_dssp GHHHHHHHHHHHHCSBC-EEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT----------TCS
T ss_pred HHHHHHHHHHHhCCCcc-CcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC----------CCC
Confidence 89999999999999999 7999999999999999999999999999999999999999999999952 257
Q ss_pred cccCCCCCCCccHHHHHHHHHHHHHHHHHHce-eeCCCC
Q psy14413 523 IPFGLGKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPSD 560 (711)
Q Consensus 523 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~ 560 (711)
+|||.|+|.|+|++||++|++++++.|+++|+ ++++++
T Consensus 390 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 428 (450)
T 3tkt_A 390 LAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGE 428 (450)
T ss_dssp STTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSC
T ss_pred CCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence 99999999999999999999999999999998 776643
No 52
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=1.4e-37 Score=339.56 Aligned_cols=171 Identities=22% Similarity=0.312 Sum_probs=154.8
Q ss_pred hhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCChh
Q psy14413 364 DKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPY 443 (711)
Q Consensus 364 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lpy 443 (711)
++.+..++.... .+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++ |
T Consensus 213 ~d~l~~ll~~~~-~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------~ 276 (412)
T 2zbx_A 213 AGLVGALVADQL-ANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS---------------L 276 (412)
T ss_dssp SSHHHHHHHTTT-TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------G
T ss_pred CCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH---------------h
Confidence 344444443332 345799999999999999999999999999999999999999999999854 7
Q ss_pred HHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCcc
Q psy14413 444 LEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLI 523 (711)
Q Consensus 444 l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l 523 (711)
++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||- ..++
T Consensus 277 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l 346 (412)
T 2zbx_A 277 VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA----------RHHL 346 (412)
T ss_dssp HHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCC
T ss_pred HHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCCC----------CCcc
Confidence 999999999999999977999999999999999999999999999999999999999999999972 3589
Q ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 524 PFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 524 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
|||.|+|.|+|++||++|++++++.|+++| +++++.+
T Consensus 347 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~ 384 (412)
T 2zbx_A 347 AFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVP 384 (412)
T ss_dssp TTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence 999999999999999999999999999999 7998643
No 53
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=1.7e-37 Score=339.23 Aligned_cols=242 Identities=20% Similarity=0.281 Sum_probs=182.6
Q ss_pred ccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+.+ ..+++|+|+. .||.+.+ +. ..+......+........ .........+..++.+.+++. .
T Consensus 151 ~vdl~~~~~~~~~~~vi~~-~~G~~~~--~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~i~~r----~ 218 (417)
T 2y5n_A 151 PADLVAMFARQLPVRVICE-LLGVPSA--DH----DRFTRWSGAFLSTAEVTA-EEMQEAAEQAYAYMGDLIDRR----R 218 (417)
T ss_dssp SEEHHHHTTTTHHHHHHHH-HHTCCGG--GH----HHHHHHHHTTSTTCCCCH-HHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CeeHHHHHHHHhHHHHHHH-HcCCCHH--HH----HHHHHHHHHHhcccCCCH-HHHHHHHHHHHHHHHHHHHHH----H
Confidence 56776555 5699999997 6998754 22 223333333322111000 000111112222222222211 0
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++... ..+..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 219 --~--~~~~dll~~ll~~~-~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------- 285 (417)
T 2y5n_A 219 --K--EPTDDLVSALVQAR-DQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE-------- 285 (417)
T ss_dssp --H--SCCSSHHHHHHHCC-BTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------
T ss_pred --h--CCCCCHHHHHHhhh-ccCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------
Confidence 0 12334444444332 2344699999999999999999999999999999999999999999999864
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCC-cccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAP-IGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~-~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
|++|||+|+||++|+++ ..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 286 -------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----- 353 (417)
T 2y5n_A 286 -------LIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP----- 353 (417)
T ss_dssp -------GHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS-----
T ss_pred -------HHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC-----
Confidence 79999999999999999 67999999999999999999999999999999999999999999999983
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++++
T Consensus 354 -----~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 395 (417)
T 2y5n_A 354 -----NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIP 395 (417)
T ss_dssp -----CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred -----CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCC
Confidence 2589999999999999999999999999999999 5888654
No 54
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=7e-37 Score=334.79 Aligned_cols=242 Identities=21% Similarity=0.289 Sum_probs=185.6
Q ss_pred ccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+.+ ..+++++|+.+ ||.+.+ +......+...+ ...... ..........+..++.+.+++. .
T Consensus 147 ~~d~~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~l~~~~~~~i~~r----~ 213 (417)
T 3tyw_A 147 PVDLVSAYANAVSTSVICEL-LGIPRH--DLEFFRDVTRIS----GSRNST--AEQVSEALGGLFGLLGGLVAER----R 213 (417)
T ss_dssp SEEHHHHTHHHHHHHHHHHH-HTCCTT--TTTHHHHHHHHH----HSSSSC--TTHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CcchHHHHHHHHHHHHHHHH-hCCCHH--HHHHHHHHHHHH----hcccCC--HHHHHHHHHHHHHHHHHHHHHH----h
Confidence 36777766 57889999987 998876 222222222222 111110 0111111222222333222211 1
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++.... .+.++++++++.++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 214 --~--~~~~d~l~~ll~~~~-~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------- 280 (417)
T 3tyw_A 214 --E--EPRDDLISKLVTDHL-VPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD-------- 280 (417)
T ss_dssp --S--SCCSSHHHHHHHHTT-TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG--------
T ss_pred --h--CCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH--------
Confidence 1 123455544444332 334699999999999999999999999999999999999999999999975
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+|+||.
T Consensus 281 -------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------ 347 (417)
T 3tyw_A 281 -------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD------ 347 (417)
T ss_dssp -------GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC------
T ss_pred -------HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC------
Confidence 7999999999999999976899999999999999999999999999999999999999999999993
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDE 561 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~ 561 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++.+.
T Consensus 348 ----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~ 390 (417)
T 3tyw_A 348 ----NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGER 390 (417)
T ss_dssp ----CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSCT
T ss_pred ----CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCCC
Confidence 2589999999999999999999999999999999 99987543
No 55
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=3.1e-37 Score=337.27 Aligned_cols=174 Identities=22% Similarity=0.290 Sum_probs=156.4
Q ss_pred CchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCC
Q psy14413 362 PWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441 (711)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l 441 (711)
+.++.+..++....+. .+++++++.+++.+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 221 ~~~dll~~ll~~~~~~--~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-------------- 284 (416)
T 3p3o_A 221 PGDDLTSDIVRAFHDG--VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE-------------- 284 (416)
T ss_dssp CCSSHHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------
T ss_pred CCccHHHHHHHhhccC--CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------------
Confidence 3445555444433322 799999999999999999999999999999999999999999999875
Q ss_pred hhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCC
Q psy14413 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 521 (711)
Q Consensus 442 pyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~ 521 (711)
|++++|+|+||++|++|..++|.+++|++++|+.||||+.|.++.+++||||++|+||++|||+||.+ ..
T Consensus 285 -~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~---------~~ 354 (416)
T 3p3o_A 285 -LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---------AP 354 (416)
T ss_dssp -GHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS---------SC
T ss_pred -HHHHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC---------CC
Confidence 89999999999999997789999999999999999999999999999999999999999999999743 35
Q ss_pred ccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCC
Q psy14413 522 LIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDE 561 (711)
Q Consensus 522 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~ 561 (711)
++|||.|+|.|+|++||++|++++++.|+++| +++++++.
T Consensus 355 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~ 395 (416)
T 3p3o_A 355 SIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEI 395 (416)
T ss_dssp CCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCC
T ss_pred eecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCC
Confidence 89999999999999999999999999999999 58876543
No 56
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=3.8e-37 Score=327.81 Aligned_cols=231 Identities=20% Similarity=0.233 Sum_probs=177.5
Q ss_pred ccCCchh-HHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPN-LKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~-~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+. ...+++|+|+.+ ||.+.+ +... +......+..... ......... .....+.++..+.+
T Consensus 91 ~~d~~~~~~~~~~~~vi~~~-~G~~~~--~~~~----~~~~~~~~~~~~~-p~~~~~~~~--~~~~~~~~~~~~~i---- 156 (343)
T 2rfb_A 91 NKDIISEYAVRLPVNIISKI-LGIPDS--DMPL----FKLWSDYIIGNKR-DENFNYVNN--RMVSRLLEIFKSDS---- 156 (343)
T ss_dssp TSCHHHHTTTHHHHHHHHHH-HTCCGG--GHHH----HHHHHHHHHTSCC-SSHHHHHHH--HHHHHHHHHHHSCC----
T ss_pred ccCHHHHHhhhhhHHHHHHH-cCCCHH--HHHH----HHHHHHHHhhccC-cchhhHHHH--HHHHHHHHHHHHHH----
Confidence 5677664 489999999998 998764 2222 2222222211100 000000001 11122233333221
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
.++ +..++... ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus 157 -------~~d-l~~ll~~~-~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~--------- 218 (343)
T 2rfb_A 157 -------HGI-INVLAGSS-LKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR--------- 218 (343)
T ss_dssp -------SSH-HHHHHTCB-CSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH---------
T ss_pred -------hcc-HHHHHhhh-cCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc---------
Confidence 123 33333222 234569999999999999999999999999999999999999999999985
Q ss_pred hhhcCChhHHHHHHHHhcCCCCC-CcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTA-PIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~-~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
+|||+|+||++|++ + .++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+|||+
T Consensus 219 ---------~a~i~E~lRl~p~~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~------ 282 (343)
T 2rfb_A 219 ---------SGFVEETLRYYSPIQF-LPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR------ 282 (343)
T ss_dssp ---------HHHHHHHHHHSCSBCC-BCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS------
T ss_pred ---------HHHHHHHHhhCccccc-ccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC------
Confidence 79999999999999 8 899999999999999999999999999999999999999999999994
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHce-eeCCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPSD 560 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.|+++|+ ++++++
T Consensus 283 -----~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 324 (343)
T 2rfb_A 283 -----EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYK 324 (343)
T ss_dssp -----SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTT
T ss_pred -----CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence 24799999999999999999999999999999996 998763
No 57
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=5.6e-37 Score=335.76 Aligned_cols=249 Identities=22% Similarity=0.253 Sum_probs=184.2
Q ss_pred ccCCc-hhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCc--ccccccchhHHHHHHHHHHHHhhhhcc
Q psy14413 277 QVPTQ-PNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAG--ESNGRRGYMLTYIIAYIRDFACDYYFI 353 (711)
Q Consensus 277 ~v~~~-~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~ 353 (711)
.+|+. +....+++++|+. .||.+.+ +......+...+...+...... ......... ......+.++..+.+..
T Consensus 143 ~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~ 218 (418)
T 3r9b_A 143 EFNLIDNLAYPLPVAVICR-LLGVPIE--DEPKFSRASALLAAALDPFLALTGETSDLFDEQ-MKAGMWLRDYLRALIDE 218 (418)
T ss_dssp EEEHHHHTTTHHHHHHHHH-HHTCCGG--GHHHHHHHHHHHHHTTSCHHHHHSSCCTTHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CeehHHHHhCcCCHHHHHH-HcCCCHH--HHHHHHHHHHHHHhhcCccccccccCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 56654 4456899999999 8998865 3233333333332222111000 000000011 11112222233322221
Q ss_pred CCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCC
Q psy14413 354 GDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEP 433 (711)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~ 433 (711)
+.. .+.++.+..++.. ...+..+++++++.++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 219 r~~----~~~~d~l~~ll~~-~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------ 287 (418)
T 3r9b_A 219 RRR----TPGEDLMSGLVAV-EESGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------ 287 (418)
T ss_dssp TTT----SCCSSHHHHHHHH-HHHSSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------
T ss_pred HHh----CCCccHHHHHHHh-hhccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------
Confidence 111 1234554444433 23445699999999999999999999999999999999999999999999975
Q ss_pred ChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCC
Q psy14413 434 TILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTS 513 (711)
Q Consensus 434 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~ 513 (711)
|++|+|+|+||++|+++. +.|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+|.
T Consensus 288 ---------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~----- 352 (418)
T 3r9b_A 288 ---------RASAVIEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA----- 352 (418)
T ss_dssp ---------GHHHHHHHHHHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----
T ss_pred ---------hHHHHHHHHHHhCCcccc-ceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC-----
Confidence 799999999999999995 77999999999999999999999999999999999999999999992
Q ss_pred CCCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 514 GEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 514 ~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
...++|||.|+|.|+|++||++|++++++.|+++| +++++++
T Consensus 353 -----~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 395 (418)
T 3r9b_A 353 -----QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGE 395 (418)
T ss_dssp -----CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred -----CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC
Confidence 23589999999999999999999999999999999 8998754
No 58
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=4.6e-37 Score=335.22 Aligned_cols=171 Identities=24% Similarity=0.304 Sum_probs=152.6
Q ss_pred hhHHHHHHHhhccc--CCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCC
Q psy14413 364 DKTVLLCINVKKRL--TRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441 (711)
Q Consensus 364 ~~~~~~~~~~~~~~--~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l 441 (711)
++.+..++...... +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus 208 ~d~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------------- 272 (408)
T 1odo_A 208 DDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE--------------- 272 (408)
T ss_dssp SSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS---------------
T ss_pred CCHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH---------------
Confidence 34444444433221 4569999999999999999999999999999999999999999999974
Q ss_pred hhHHHHHHHHhcCCCCCCcccceecccccccC-CEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCC
Q psy14413 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLG-SYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDE 520 (711)
Q Consensus 442 pyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~-g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~ 520 (711)
+|++|||+|+||++|+++..++|.+.+|++++ ||.|||||.|.++.+++||||++|+||++|+|||+ +.
T Consensus 273 ~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~ 342 (408)
T 1odo_A 273 VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT----------VK 342 (408)
T ss_dssp SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS----------CC
T ss_pred HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC----------CC
Confidence 37999999999999999977899999999999 99999999999999999999999999999999994 23
Q ss_pred CccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCC
Q psy14413 521 TLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559 (711)
Q Consensus 521 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~ 559 (711)
.++|||.|+|.|+|++||.+|++++++.|+++| ++++..
T Consensus 343 ~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~ 382 (408)
T 1odo_A 343 EHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLAD 382 (408)
T ss_dssp CCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESC
T ss_pred CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecC
Confidence 689999999999999999999999999999999 799864
No 59
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=8.6e-37 Score=328.06 Aligned_cols=235 Identities=20% Similarity=0.187 Sum_probs=180.1
Q ss_pred cccCCchh-HHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccC
Q psy14413 276 CQVPTQPN-LKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIG 354 (711)
Q Consensus 276 ~~v~~~~~-~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 354 (711)
.++|+.+. ...+++|+|+. .||.+ + +......+...+...+...+.. .. .......+..++.+.+++.
T Consensus 110 g~~d~~~~~~~~~~~~vi~~-~~G~~-~--~~~~~~~~~~~~~~~~~~~p~~--~~-~~~~~~~~~~~~~~~i~~r---- 178 (367)
T 3b4x_A 110 EEFDVIESFAIPLPILVISK-MLGIN-P--DVKKVKDWSDLVALRLGRADEI--FS-IGRKYLELISFSKKELDSR---- 178 (367)
T ss_dssp SEEEHHHHTTTHHHHHHHHH-HHTCC-C--CHHHHHHHHHHHHTTTTSTTGG--GC-CCHHHHHHHHHHHHHHHHH----
T ss_pred CCcchHHHHHHhhHHHHHHH-HcCCC-C--cHHHHHHHHHHHHhccCCChhh--HH-HHHHHHHHHHHHHHHHHHH----
Confidence 34777754 47999999999 79998 5 2222233333322221111111 01 1122223333333332221
Q ss_pred CCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCC
Q psy14413 355 DSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPT 434 (711)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~ 434 (711)
.. .+.++.+..++.. .++++++..++..+++||+|||+++++|++++|++ |++|+|+++|++
T Consensus 179 ~~----~~~~dll~~ll~~------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~------- 240 (367)
T 3b4x_A 179 KG----KEIVDLTGKIANS------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA------- 240 (367)
T ss_dssp TT----TCCSSHHHHHHTS------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS-------
T ss_pred hc----CCCCCHHHHHHhc------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc-------
Confidence 11 1233444433321 68999999999999999999999999999999999 999999999963
Q ss_pred hhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 435 ILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 435 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
++||+|+||++|+++ .++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 241 ----------~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----- 304 (367)
T 3b4x_A 241 ----------LKAVEEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----- 304 (367)
T ss_dssp ----------HHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS-----
T ss_pred ----------hHHHHHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC-----
Confidence 799999999999999 8999999999999999999999999999999999999999999999984
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++++
T Consensus 305 -----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 346 (367)
T 3b4x_A 305 -----NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK 346 (367)
T ss_dssp -----CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc
Confidence 2589999999999999999999999999999999 7998653
No 60
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=1.7e-37 Score=337.58 Aligned_cols=238 Identities=18% Similarity=0.218 Sum_probs=182.9
Q ss_pred ccCCchhHHH-HHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNLKK-YLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~~~-~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+.+.. ++.++++. .||.+.+ +. ..+......+...+... .........+..++.+.+++. .
T Consensus 136 ~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~r----~ 202 (398)
T 1lfk_A 136 PADLIAFVADKVPGAVLCE-LVGVPRD--DR----DMFMKLCHGHLDASLSQ--KRRAALGDKFSRYLLAMIARE----R 202 (398)
T ss_dssp SEEHHHHTTTTHHHHHHHH-HHTCCGG--GH----HHHHHHHHHTTCTTSCH--HHHHHHHHHHHHHHHHHHHHH----H
T ss_pred CccHHHHHHHHHHHHHHHH-HcCCCHH--HH----HHHHHHHHHHHhcccch--HHHHHHHHHHHHHHHHHHHHH----H
Confidence 4777777776 88998887 5898764 22 22333333332211110 000111112222222222211 0
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++... +..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 203 --~--~~~~dll~~ll~~~---~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------- 267 (398)
T 1lfk_A 203 --K--EPGEGMIGAVVAEY---GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ-------- 267 (398)
T ss_dssp --H--SCCSSHHHHHHHHH---GGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH--------
T ss_pred --h--CCCCCHHHHHHHhc---CCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH--------
Confidence 0 12334444444332 34699999999999999999999999999999999999999999999975
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||.
T Consensus 268 -------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~------ 334 (398)
T 1lfk_A 268 -------SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP------ 334 (398)
T ss_dssp -------HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC------
T ss_pred -------HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC------
Confidence 7999999999999999977999999999999999999999999999999999999999999999983
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~ 559 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++.
T Consensus 335 ----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~ 375 (398)
T 1lfk_A 335 ----IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLAD 375 (398)
T ss_dssp ----CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred ----CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCC
Confidence 2489999999999999999999999999999999 899864
No 61
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=3e-37 Score=338.14 Aligned_cols=172 Identities=23% Similarity=0.294 Sum_probs=156.1
Q ss_pred chhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCCh
Q psy14413 363 WDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCP 442 (711)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lp 442 (711)
.++.+..++... ..+.++++++++.+++.+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 224 ~~dll~~ll~~~-~~~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~--------------- 287 (421)
T 3lxh_A 224 GTDLITRILNVE-IDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL--------------- 287 (421)
T ss_dssp CCSHHHHHHTSC-BTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH---------------
T ss_pred CCCHHHHHHhhh-ccCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------
Confidence 345544444332 2445799999999999999999999999999999999999999999999987
Q ss_pred hHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCc
Q psy14413 443 YLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETL 522 (711)
Q Consensus 443 yl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~ 522 (711)
|++++|+|+||++|++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|||| +..+
T Consensus 288 ~l~a~i~E~lRl~p~~--~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~ 355 (421)
T 3lxh_A 288 KLQRGVEELFRRFAVV--SDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR----------DVTH 355 (421)
T ss_dssp HHHHHHHHHHHHCCCB--EEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCC
T ss_pred HHHHHHHHHHHhcCcc--CCceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC----------CCCC
Confidence 8999999999999999 689999999999999999999999999999999999999999999995 3468
Q ss_pred cccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCCC
Q psy14413 523 IPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDEP 562 (711)
Q Consensus 523 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~~ 562 (711)
+|||.|+|.|+|++||++|++++++.|+++| +++++++.+
T Consensus 356 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~ 396 (421)
T 3lxh_A 356 STFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAV 396 (421)
T ss_dssp CTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCC
T ss_pred CCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCCC
Confidence 9999999999999999999999999999999 999976543
No 62
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=1.3e-36 Score=331.57 Aligned_cols=239 Identities=14% Similarity=0.170 Sum_probs=184.5
Q ss_pred ccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+.+ ..+++|+|+. .||.+.+ +. ..+......+..... ...........+..++. +.+..+.
T Consensus 144 ~~dl~~~~~~~~~~~vi~~-l~G~~~~--~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~----~~i~~r~ 210 (411)
T 2dkk_A 144 PADLVERVLEPFPIAVVSE-VMGVPAA--DR----ERVHSWTRQIISTSG--GAEAAERAKRGLYGWIT----ETVRARA 210 (411)
T ss_dssp CEEHHHHTTTHHHHHHHHH-HHTCCSS--HH----HHHHHHHGGGCSSCS--CSHHHHHHHHHHHHHHH----HHHHTTT
T ss_pred CeehHHHHHHHHHHHHHHH-HhCCCHH--HH----HHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 46666555 4799999998 5999876 22 233333333332211 00000111122222332 2222111
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
+ .+.++.+..++.. ..+..+++++++.++..+++|| |||+++++|++++|++||++|+++++|++
T Consensus 211 --~--~~~~dll~~ll~~--~~~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------- 275 (411)
T 2dkk_A 211 --G--SEGGDVYSMLGAA--VGRGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG-------- 275 (411)
T ss_dssp --T--CCSSCHHHHHHHH--HHTTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT--------
T ss_pred --h--CCCCCHHHHHHHh--cCCCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------
Confidence 1 1334444444433 3445799999999999999999 99999999999999999999999999974
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcc-cceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIG-VAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~-~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
|++++|+|+||++|+++.. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|+||.
T Consensus 276 -------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----- 343 (411)
T 2dkk_A 276 -------ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----- 343 (411)
T ss_dssp -------CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS-----
T ss_pred -------HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC-----
Confidence 7999999999999999977 899999999999999999999999999999999999999999999995
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++++
T Consensus 344 -----~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 385 (411)
T 2dkk_A 344 -----NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVP 385 (411)
T ss_dssp -----CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred -----CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCC
Confidence 2589999999999999999999999999999999 8998754
No 63
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=1.3e-36 Score=333.11 Aligned_cols=173 Identities=26% Similarity=0.391 Sum_probs=156.3
Q ss_pred CchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCC
Q psy14413 362 PWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441 (711)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l 441 (711)
+.++.+..++... .++++++++++.+++.+++||+|||+++++|++++|++||++|+++++|++
T Consensus 233 ~~~dll~~ll~~~--~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~-------------- 296 (426)
T 3rwl_A 233 PGNDLISMLAHSP--ATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPA-------------- 296 (426)
T ss_dssp CCSSHHHHHHHCG--GGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------
T ss_pred CCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChH--------------
Confidence 3455555444332 334589999999999999999999999999999999999999999999853
Q ss_pred hhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCC
Q psy14413 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 521 (711)
Q Consensus 442 pyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~ 521 (711)
|++++|+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||.. ..
T Consensus 297 -~l~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~---------~~ 365 (426)
T 3rwl_A 297 -LVETMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP---------RQ 365 (426)
T ss_dssp -GHHHHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT---------TC
T ss_pred -hHHHHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC---------CC
Confidence 899999999999999994 8999999999999999999999999999999999999999999999953 35
Q ss_pred ccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCC
Q psy14413 522 LIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDE 561 (711)
Q Consensus 522 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~ 561 (711)
++|||.|+|.|+|++||++|++++++.|+++| +++++++.
T Consensus 366 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~ 406 (426)
T 3rwl_A 366 HLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP 406 (426)
T ss_dssp CSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCC
T ss_pred ccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCC
Confidence 89999999999999999999999999999999 99987543
No 64
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=1.7e-36 Score=331.64 Aligned_cols=257 Identities=16% Similarity=0.221 Sum_probs=187.7
Q ss_pred cccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 276 CQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 276 ~~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
..+|+.+.+..+++++|+.+ ||.+.+..+.......+..+...+... .............+..++.+.+++..
T Consensus 129 ~~vdl~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~---- 201 (415)
T 3awm_A 129 GEIVFYDELHEPLTRAVCAW-AGVPLPDDEAGNRAGELRALFDAAGSA--SPRHLWSRLARRRVDAWAKRIIEGIR---- 201 (415)
T ss_dssp SEEEHHHHHHHHHHHHHHHH-HTCCCCGGGHHHHHHHHHHHHHSTTCS--SHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CcEeHHHHHHHHHHHHHHHH-cCCCCCcchHHHHHHHHHHHHHHhccc--CchHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 35778888999999999998 899887533322222222222221100 00000000111112222222222111
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
......+.++.+..++......+..++++++...+..++ ||++||+++++|++++|++||++|+++++|
T Consensus 202 ~~~~~~~~~d~l~~ll~~~~~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e---------- 270 (415)
T 3awm_A 202 AGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ---------- 270 (415)
T ss_dssp HTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC----------
T ss_pred HhhhcCCCCCHHHHHHhhhhccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH----------
Confidence 000112233444444433333445688988887777655 999999999999999999999999999986
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
+||++++|+|+||++|+++ .++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||++++
T Consensus 271 -----~~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~--- 341 (415)
T 3awm_A 271 -----PDYAELFVQEVRRFYPFFP-AVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD--- 341 (415)
T ss_dssp -----TTHHHHHHHHHHHHSCCSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC---
T ss_pred -----HHHHHHHHHHHhhcCCCcc-ccceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC---
Confidence 5899999999999999999 5899999999999999999999999999999999999999999999998632
Q ss_pred CcCCCCccccCCC----CCCCccHHHHHHHHHHHHHHHHHHceeeCCCC
Q psy14413 516 VLYDETLIPFGLG----KRRCLGEPMARTSLFIFLSSLLYHFNISIPSD 560 (711)
Q Consensus 516 ~~~~~~~l~FG~G----~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 560 (711)
.....++|||.| +|.|+|++||++|++++++.|+++|+++++++
T Consensus 342 -~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 389 (415)
T 3awm_A 342 -EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQ 389 (415)
T ss_dssp -CCSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSC
T ss_pred -CCCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCC
Confidence 134679999999 59999999999999999999999999998654
No 65
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=2.2e-37 Score=337.91 Aligned_cols=171 Identities=22% Similarity=0.278 Sum_probs=154.4
Q ss_pred hhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCChh
Q psy14413 364 DKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPY 443 (711)
Q Consensus 364 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lpy 443 (711)
++.+..++.... .+..++++++..++..+++||+|||+++++|++++|++||++|+|+++|+ +|
T Consensus 211 ~d~l~~ll~~~~-~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~---------------~~ 274 (411)
T 1gwi_A 211 DDLTSALIQASE-NGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE---------------AE 274 (411)
T ss_dssp SSHHHHHHHCCB-TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS---------------SC
T ss_pred CCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh---------------HH
Confidence 344444443322 34569999999999999999999999999999999999999999999874 37
Q ss_pred HHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCC-CCCCCcccCCCCCCCCCCCcCCCCc
Q psy14413 444 LEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW-GDPDVFRPERFIHPTSGEVLYDETL 522 (711)
Q Consensus 444 l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~~~~~~~~~~ 522 (711)
++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++| +||++|+||||.+ ..+
T Consensus 275 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~~~ 345 (411)
T 1gwi_A 275 WSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------NRH 345 (411)
T ss_dssp HHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------SCC
T ss_pred HHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------CCc
Confidence 999999999999999977999999999999999999999999999999999999 8999999999953 368
Q ss_pred cccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCC
Q psy14413 523 IPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559 (711)
Q Consensus 523 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~ 559 (711)
+|||.|+|.|+|++||.+|++++++.|+++| ++++..
T Consensus 346 lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 383 (411)
T 1gwi_A 346 ISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAV 383 (411)
T ss_dssp CTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred ccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCC
Confidence 9999999999999999999999999999999 799864
No 66
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=1.7e-36 Score=333.10 Aligned_cols=244 Identities=19% Similarity=0.218 Sum_probs=184.6
Q ss_pred ccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccc-cccchhHHHHHHHHHHHHhhhhccC
Q psy14413 277 QVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESN-GRRGYMLTYIIAYIRDFACDYYFIG 354 (711)
Q Consensus 277 ~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 354 (711)
.+|+.+.+ ..+++|+|+.+ ||.+.+ +..........+..... +..... .........+..++.+.+++.
T Consensus 167 ~vd~~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~i~~r---- 237 (435)
T 2wm5_A 167 QADLVSELAGPLPLQIICDM-MGIPKA--DHQRIFHWTNVILGFGD--PDLATDFDEFMQVSADIGAYATALAEDR---- 237 (435)
T ss_dssp EEEHHHHTTTHHHHHHHHHH-HTCCGG--GHHHHHHHHHHHHHTTC--TTSCCCHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred cEehHHHHHHHHHHHHHHHH-cCCCHH--HHHHHHHHHHHHhccCC--cchhhhHHHHHHHHHHHHHHHHHHHHHH----
Confidence 46676544 78999999999 999865 32223333333322111 110000 000111112222222222211
Q ss_pred CCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCC
Q psy14413 355 DSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPT 434 (711)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~ 434 (711)
. + .+.++.+..++... ..+..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++
T Consensus 238 ~--~--~~~~dll~~ll~~~-~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------- 305 (435)
T 2wm5_A 238 R--V--NHHDDLTSSLVEAE-VDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD------- 305 (435)
T ss_dssp H--H--SCCSSHHHHHHHCC-BTTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-------
T ss_pred h--c--CCCCCHHHHHHhhh-ccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-------
Confidence 1 0 12344444444332 2344699999999999999999999999999999999999999999999986
Q ss_pred hhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 435 ILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 435 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
+|++|||+|+||++|+++ .++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+|||+
T Consensus 306 -------~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~------ 371 (435)
T 2wm5_A 306 -------GLAPTAVEEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN------ 371 (435)
T ss_dssp -------HHHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC------
T ss_pred -------hHHHHHHHHHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC------
Confidence 389999999999999999 899999999999999999999999999999999999999999999993
Q ss_pred CCcCCCCccccCC-CCCCCccHHHHHHHHHHHHHHHHHHce-eeCCC
Q psy14413 515 EVLYDETLIPFGL-GKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPS 559 (711)
Q Consensus 515 ~~~~~~~~l~FG~-G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~ 559 (711)
+..++|||. |+|.|+|++||.+|++++++.|+++|+ +++++
T Consensus 372 ----~~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~ 414 (435)
T 2wm5_A 372 ----PNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATE 414 (435)
T ss_dssp ----SCCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred ----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECC
Confidence 135899999 999999999999999999999999997 99875
No 67
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=4.7e-37 Score=335.40 Aligned_cols=171 Identities=24% Similarity=0.328 Sum_probs=154.6
Q ss_pred hhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCChh
Q psy14413 364 DKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPY 443 (711)
Q Consensus 364 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lpy 443 (711)
++.+..++... ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++ |
T Consensus 214 ~dll~~ll~~~-~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~ 277 (413)
T 2z36_A 214 DDLFSRQIARQ-RQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG---------------R 277 (413)
T ss_dssp SSHHHHHHHHH-HHHSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG---------------G
T ss_pred CCHHHHHHHhh-cCCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH---------------H
Confidence 34444444332 2335799999999999999999999999999999999999999999999964 7
Q ss_pred HHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCcc
Q psy14413 444 LEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLI 523 (711)
Q Consensus 444 l~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l 523 (711)
++|||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||. ..++
T Consensus 278 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l 347 (413)
T 2z36_A 278 TPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA----------RHHL 347 (413)
T ss_dssp HHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC----------CCCC
T ss_pred HHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC----------CCCC
Confidence 999999999999999978999999999999999999999999999999999999999999999984 2479
Q ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 524 PFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 524 ~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
|||.|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus 348 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 385 (413)
T 2z36_A 348 AFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVP 385 (413)
T ss_dssp TTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred CCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 999999999999999999999999999999 5888654
No 68
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=7.4e-37 Score=333.60 Aligned_cols=237 Identities=21% Similarity=0.331 Sum_probs=180.9
Q ss_pred ccCCchhHH-HHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCC-cccccccchhHHHHHHHHHHHHhhhhccC
Q psy14413 277 QVPTQPNLK-KYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPA-GESNGRRGYMLTYIIAYIRDFACDYYFIG 354 (711)
Q Consensus 277 ~v~~~~~~~-~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 354 (711)
.+|+.+.+. .+++|+|+. .||.+.+ +.. .+......+..... .........+..++.+.+.+..+
T Consensus 142 ~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~------ 208 (408)
T 3abb_A 142 GADLVSAFALPVPSVAICE-LLGVPYG--DHD----FFEECSRNFVGAATSAEADAAFGELYTYLHGLVGRKQA------ 208 (408)
T ss_dssp CEEHHHHTTTHHHHHHHHH-HHTCCGG--GHH----HHHHHHHHHC------CCSSHHHHHHHHHHHHHHHHHH------
T ss_pred CeehHHHHHHHHHHHHHHH-HhCCCHH--HHH----HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 456666554 588999987 6998754 222 22222222221111 11111122222333333333221
Q ss_pred CCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCC
Q psy14413 355 DSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPT 434 (711)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~ 434 (711)
.+.++.+..++.... .+..++++++..++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus 209 ------~~~~d~l~~ll~~~~-~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------- 274 (408)
T 3abb_A 209 ------EPEDGLLDELIARQL-EEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG------- 274 (408)
T ss_dssp ------SCCSSHHHHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH-------
T ss_pred ------CCCCCHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------
Confidence 122344444443332 345699999999999999999999999999999999999999999998764
Q ss_pred hhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCC
Q psy14413 435 ILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 514 (711)
Q Consensus 435 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 514 (711)
|++|||+|+||++|+++ .++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||-
T Consensus 275 --------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----- 340 (408)
T 3abb_A 275 --------AVSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNA----- 340 (408)
T ss_dssp --------HHHHHHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCC-----
T ss_pred --------hHHHHHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCC-----
Confidence 79999999999999999 8999999999999999999999999999999999999999999999962
Q ss_pred CCcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCC
Q psy14413 515 EVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559 (711)
Q Consensus 515 ~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~ 559 (711)
..++|||.|+|.|+|++||++|++++++.|+++| +++++.
T Consensus 341 -----~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 381 (408)
T 3abb_A 341 -----RHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAV 381 (408)
T ss_dssp -----TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred -----CCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecC
Confidence 3589999999999999999999999999999999 898864
No 69
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=1.4e-36 Score=333.83 Aligned_cols=242 Identities=20% Similarity=0.245 Sum_probs=180.4
Q ss_pred cccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCccccc-ccchhHHHHHHHHHHHHhhhhcc
Q psy14413 276 CQVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNG-RRGYMLTYIIAYIRDFACDYYFI 353 (711)
Q Consensus 276 ~~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~ 353 (711)
..+|+...+ ..+++++|+.+ ||.+. ++.. .+......+.......... ........+..++.+.+++
T Consensus 162 ~~~d~~~~~~~~~~~~vi~~l-~G~~~--~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~---- 230 (433)
T 3ivy_A 162 GSGDFVEQVSCELPLQAIAGL-LGVPQ--EDRG----KLFHWSNEMTGNEDPEYAHIDPKASSAELIGYAMKMAEE---- 230 (433)
T ss_dssp CEEEHHHHTTSHHHHHHHHHH-HTCCH--HHHH----HHHHHHTTCSCCCCGGGTTCCHHHHHHHHHHHHHHHHHH----
T ss_pred CCeeHHHHHHHHHHHHHHHHH-cCCCH--HHHH----HHHHHHHHHhccCCchhhhHHHHHHHHHHHHHHHHHHHH----
Confidence 346776666 99999999996 89763 2332 2333332322111100000 0111122222233322221
Q ss_pred CCCCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCC
Q psy14413 354 GDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEP 433 (711)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~ 433 (711)
+. ..+.++.+..++.. ...+..+++++++.++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus 231 r~----~~~~~dll~~ll~~-~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~------ 299 (433)
T 3ivy_A 231 KA----KNPADDIVTQLIQA-DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP------ 299 (433)
T ss_dssp C-----------CHHHHHSC-C--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC------
T ss_pred Hh----cCCCCcHHHHHHhh-hcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc------
Confidence 11 12334444444432 23445799999999999999999999999999999999999999999999975
Q ss_pred ChhhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCC
Q psy14413 434 TILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTS 513 (711)
Q Consensus 434 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~ 513 (711)
+++|+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++||||++|+||++|+|+||..
T Consensus 300 -----------~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~~~--- 364 (433)
T 3ivy_A 300 -----------ETAADEIVRWATPVTA-FQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPN--- 364 (433)
T ss_dssp -----------TTHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCSC---
T ss_pred -----------cchhHHHhhhCcchhc-eeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCCCC---
Confidence 5999999999999994 8999999999999999999999999999999999999999999999943
Q ss_pred CCCcCCCCccccC-CCCCCCccHHHHHHHHHHHHHHHHHHce-eeCCCCC
Q psy14413 514 GEVLYDETLIPFG-LGKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPSDE 561 (711)
Q Consensus 514 ~~~~~~~~~l~FG-~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~~~ 561 (711)
.++||| .|+|.|+|++||++|++++++.|+++|+ ++++++.
T Consensus 365 -------~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~ 407 (433)
T 3ivy_A 365 -------PHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAP 407 (433)
T ss_dssp -------CCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCC
T ss_pred -------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCC
Confidence 589999 9999999999999999999999999999 9987543
No 70
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=3.8e-36 Score=323.36 Aligned_cols=230 Identities=23% Similarity=0.270 Sum_probs=178.5
Q ss_pred ccCCchhH-HHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCC
Q psy14413 277 QVPTQPNL-KKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGD 355 (711)
Q Consensus 277 ~v~~~~~~-~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 355 (711)
.+|+.+.+ ..+++|+|+.+ ||.+.+ +.. .+......+........ . ..... .....+.++..+.+
T Consensus 114 ~~d~~~~~~~~~~~~vi~~~-~G~~~~--~~~----~~~~~~~~~~~~~~~p~-~-~~~~~-~~~~~~~~~~~~~i---- 179 (368)
T 1io7_A 114 EDDIVKKLAVPLPIIVISKI-LGLPIE--DKE----KFKEWSDLVAFRLGKPG-E-IFELG-KKYLELIGYVKDHL---- 179 (368)
T ss_dssp SEEHHHHTTTHHHHHHHHHH-HTCCGG--GHH----HHHHHGGGCTTSCCCTT-C-HHHHH-HHHHHHHHHHHHHT----
T ss_pred CccHHHHHHHHHHHHHHHHH-hCCCHH--HHH----HHHHHHHHHHhccCChH-H-HHHHH-HHHHHHHHHHHHHh----
Confidence 47777655 78999999998 998764 221 23333333222110000 0 00111 11222333333332
Q ss_pred CCCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCCh
Q psy14413 356 SFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435 (711)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~ 435 (711)
.+.++.+..++. . .++++++..++.++++||+|||+++++|++++|++|| +|+|+++| +
T Consensus 180 -----~~~~d~l~~ll~--~----~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~-------- 238 (368)
T 1io7_A 180 -----NSGTEVVSRVVN--S----NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N-------- 238 (368)
T ss_dssp -----TSSCHHHHHHHT--S----SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T--------
T ss_pred -----CCCCCHHHHHHh--c----cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c--------
Confidence 123344333332 1 6899999999999999999999999999999999999 99999999 3
Q ss_pred hhhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC
Q psy14413 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 515 (711)
Q Consensus 436 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 515 (711)
|++|+|+|+||++|+++ .++|.+++|++++|+.|||||.|.++.+++||||++|+||++|+|||+
T Consensus 239 -------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~------- 303 (368)
T 1io7_A 239 -------LYLKAIEEALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN------- 303 (368)
T ss_dssp -------CHHHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC-------
T ss_pred -------hHHHHHHHHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC-------
Confidence 79999999999999999 899999999999999999999999999999999999999999999993
Q ss_pred CcCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHce-eeCCC
Q psy14413 516 VLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFN-ISIPS 559 (711)
Q Consensus 516 ~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~-~~~~~ 559 (711)
+..++|||.|+|.|+|++||.+|++++++.|+++|+ +++++
T Consensus 304 ---~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 345 (368)
T 1io7_A 304 ---PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD 345 (368)
T ss_dssp ---SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred ---CCCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC
Confidence 135899999999999999999999999999999996 99864
No 71
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=3.3e-36 Score=327.45 Aligned_cols=156 Identities=21% Similarity=0.361 Sum_probs=149.2
Q ss_pred CCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCChhHHHHHHHHhcCCCCCC
Q psy14413 380 ECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAP 459 (711)
Q Consensus 380 ~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~ 459 (711)
.+++++++.++.++++||+|||+++++|++++|++||++|+|+++|++ |++|||+|+||++|+++
T Consensus 225 ~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------~l~a~i~E~lRl~p~~~ 289 (404)
T 2xbk_A 225 ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD---------------VMARAVEEVLRTARAGG 289 (404)
T ss_dssp SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH---------------HHHHHHHHHHHHSCSSC
T ss_pred CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH---------------HHHHHHHHHHHhCCCcc
Confidence 799999999999999999999999999999999999999999999975 79999999999999999
Q ss_pred -cccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCccHHHH
Q psy14413 460 -IGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMA 538 (711)
Q Consensus 460 -~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA 538 (711)
..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||
T Consensus 290 ~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C~G~~lA 359 (404)
T 2xbk_A 290 SVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP----------NPHLTFGHGIWHCIGAPLA 359 (404)
T ss_dssp CBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS----------CCCCTTEETTEECTTHHHH
T ss_pred ccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC----------CCCCCCCCCCcCCCcHHHH
Confidence 67999999999999999999999999999999999999999999999983 2589999999999999999
Q ss_pred HHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 539 RTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 539 ~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
.+|++++++.|+++| +++++++
T Consensus 360 ~~e~~~~la~ll~~f~~~~l~~~ 382 (404)
T 2xbk_A 360 RLELRTMFTKLFTRLPELRPELP 382 (404)
T ss_dssp HHHHHHHHHHHHHHCTTCEESSC
T ss_pred HHHHHHHHHHHHHhCCcceecCC
Confidence 999999999999999 7998654
No 72
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=1.9e-35 Score=331.07 Aligned_cols=181 Identities=16% Similarity=0.146 Sum_probs=157.7
Q ss_pred CCCCCHHHHHHHHHHHH-hhchhhHHHHHHHHHHHHHh-CCchHHHHHHHHhhh----CCCCChhhhcCChhHHHHHHHH
Q psy14413 378 TRECTDDQLLVLLLDLF-MAGSETTSNSLSFSVLYLIR-YPHVQRKIQEEIDSL----NKEPTILDRYKCPYLEATIMEI 451 (711)
Q Consensus 378 ~~~l~~~~l~~~~~~~~-~aG~~tt~~~l~~~l~~l~~-~p~~~~kl~~Ei~~~----~~~~~~~~~~~lpyl~a~i~E~ 451 (711)
+.++++++++.+++.++ +||+|||+.+++|++++|+. ||++|+++++|++++ ++.++.+++.+||||+|||+|+
T Consensus 275 ~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~ 354 (495)
T 3dsk_A 275 KLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYEC 354 (495)
T ss_dssp HTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHH
Confidence 35799999998666655 99999999999999999995 999999999999988 3678999999999999999999
Q ss_pred hcCCCCCCcccceeccccccc----CCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC------CcCCCC
Q psy14413 452 MRHGNTAPIGVAHRAMKTSRL----GSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE------VLYDET 521 (711)
Q Consensus 452 lRl~p~~~~~~~r~~~~d~~~----~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~------~~~~~~ 521 (711)
||++|+++. ..|.+.+|+++ +||.||||+.|.++.+++|+||++|+||++|+|+||++++... ......
T Consensus 355 lRl~p~~~~-~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~ 433 (495)
T 3dsk_A 355 LRFEPPVTA-QYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPE 433 (495)
T ss_dssp HHHSCSSCE-EEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCT
T ss_pred HhcCCCccc-cceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcC
Confidence 999999994 56779999999 4999999999999999999999999999999999999631110 111224
Q ss_pred ccccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCC
Q psy14413 522 LIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPS 559 (711)
Q Consensus 522 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~ 559 (711)
++|||+|+|.|||++||.+|++++++.|+++|++...+
T Consensus 434 ~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~ 471 (495)
T 3dsk_A 434 TETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE 471 (495)
T ss_dssp TSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCC
Confidence 56666677999999999999999999999999987643
No 73
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=4.9e-36 Score=333.71 Aligned_cols=181 Identities=11% Similarity=0.140 Sum_probs=156.6
Q ss_pred CCCCHHHHHHHHHHHH-hhchhhHHHHHHHHHHHHHh-CCchHHHHHHHHhhh--C---CCCChhhhcCChhHHHHHHHH
Q psy14413 379 RECTDDQLLVLLLDLF-MAGSETTSNSLSFSVLYLIR-YPHVQRKIQEEIDSL--N---KEPTILDRYKCPYLEATIMEI 451 (711)
Q Consensus 379 ~~l~~~~l~~~~~~~~-~aG~~tt~~~l~~~l~~l~~-~p~~~~kl~~Ei~~~--~---~~~~~~~~~~lpyl~a~i~E~ 451 (711)
.++++++++.+++.++ ++|++||+++++|++++|++ ||++|+++++|++++ . +.++.+++.+||||+|||+|+
T Consensus 258 ~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~ 337 (473)
T 3dan_A 258 LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYES 337 (473)
T ss_dssp HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHH
Confidence 5799999998886666 78889999999999999999 799999999999888 3 578999999999999999999
Q ss_pred hcCCCCCCcccceeccccccc----CCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCC-----CcCCCCc
Q psy14413 452 MRHGNTAPIGVAHRAMKTSRL----GSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE-----VLYDETL 522 (711)
Q Consensus 452 lRl~p~~~~~~~r~~~~d~~~----~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~-----~~~~~~~ 522 (711)
||++|+++. ..|.+++|+++ +|+.||||+.|.++.+++||||++|+||++|||+||+++.... ......+
T Consensus 338 lRl~p~~~~-~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~ 416 (473)
T 3dan_A 338 LRIEPPVPP-QYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPET 416 (473)
T ss_dssp HHHSCSSCE-EEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTTTSGGGGGGGGGCCTTSSCTT
T ss_pred HhcCCCccc-ccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCCcccCCccccCCCcccccccceecCCcCc
Confidence 999999995 55669999999 9999999999999999999999999999999999999731100 0112234
Q ss_pred cccCCCCCCCccHHHHHHHHHHHHHHHHHHceeeCCCC
Q psy14413 523 IPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSD 560 (711)
Q Consensus 523 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 560 (711)
++||+|+|.|||++||.+|++++++.|+++|++...++
T Consensus 417 ~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 454 (473)
T 3dan_A 417 ESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL 454 (473)
T ss_dssp SCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccC
Confidence 55555669999999999999999999999999765443
No 74
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=4.1e-36 Score=334.72 Aligned_cols=196 Identities=32% Similarity=0.570 Sum_probs=172.7
Q ss_pred hhhHHHHHHHHHHh-ccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhh---CCCCCc
Q psy14413 20 FYDLVSAYIEEMKA-RSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTI 95 (711)
Q Consensus 20 ~~d~l~~~l~~~~~-~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~---~~~~~~ 95 (711)
..|.++.++..... ..+....++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++ ...++.
T Consensus 246 ~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~ 325 (479)
T 3tbg_A 246 PRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEM 325 (479)
T ss_dssp CCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCH
T ss_pred cchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccccch
Confidence 46777777665443 33345679999999999999999999999999999999999999999999999987 456778
Q ss_pred cccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCC
Q psy14413 96 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 175 (711)
Q Consensus 96 ~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~ 175 (711)
+++.+|||++|||+|+||++|++|...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++ +.
T Consensus 326 ~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~-~~ 404 (479)
T 3tbg_A 326 GDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQ-GH 404 (479)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBCTT-CC
T ss_pred hhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccCCCC-cc
Confidence 89999999999999999999999987778888999999999999999999999999999999999999999999754 34
Q ss_pred CcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 176 VLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 176 ~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
...+.+|+|||.|+|. |+|+.||..++++++|.++.+|++.
T Consensus 405 ~~~~~~~~pFG~G~R~-----------C~G~~lA~~e~~~~la~ll~~f~~~ 445 (479)
T 3tbg_A 405 FVKPEAFLPFSAGRRA-----------CLGEPLARMELFLFFTSLLQHFSFS 445 (479)
T ss_dssp BCCCTTCCTTCCSTTS-----------CTTHHHHHHHHHHHHHHHHHHEEEE
T ss_pred cCCCCceecCCCCCcC-----------ChhHHHHHHHHHHHHHHHHHccEEE
Confidence 4457789999999987 6777777788999999999998863
No 75
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=9.6e-36 Score=322.20 Aligned_cols=235 Identities=20% Similarity=0.260 Sum_probs=180.0
Q ss_pred ccCCchhHHHHHHHHHHhhcCCCCCChhhhhchhHHHHHHHHHhCCCCCcccccccchhHHHHHHHHHHHHhhhhccCCC
Q psy14413 277 QVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 356 (711)
Q Consensus 277 ~v~~~~~~~~~t~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 356 (711)
.+|+.+.+..++.+.++...||.+.+ +......++..+.. ... ..........+..++.+.+++. .
T Consensus 127 ~~d~~~~~~~~~~~~v~~~~~G~~~~--~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~i~~~----~- 192 (384)
T 3oo3_A 127 PVDFVRHAAWPIPAYIACEFLGVPRD--DQAELSRMIRESRE----SRL---PRQRTLSGLGIVNYTKRLTSGK----R- 192 (384)
T ss_dssp SEEHHHHTTTHHHHHHHHHHHTCCGG--GHHHHHHHHHHHHH----CSC---HHHHHHHHHHHHHHHHHHHHHH----H-
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHHHhc----cCC---hHHHHHHHHHHHHHHHHHHHHH----H-
Confidence 57777888887777777778998864 32223333332222 000 0000111112222222222211 0
Q ss_pred CCcCCCchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChh
Q psy14413 357 FETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTIL 436 (711)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~ 436 (711)
..+.++.+..++.. .+.+++++++..++..+++||+|||+++++|++++|++||++|+++++|++.
T Consensus 193 ---~~~~~d~l~~ll~~---~~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~-------- 258 (384)
T 3oo3_A 193 ---RDPGDGMIGVIVRE---HGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL-------- 258 (384)
T ss_dssp ---HSCCSSHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG--------
T ss_pred ---hCCCCCHHHHHHHh---cCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH--------
Confidence 12234444444433 2356999999999999999999999999999999999999999999999874
Q ss_pred hhcCChhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCC
Q psy14413 437 DRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEV 516 (711)
Q Consensus 437 ~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~ 516 (711)
++|||+|+||++|+++..++|.+++|++++|+.|||||.|.++.+++|| +||++|+||||.
T Consensus 259 -------l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~~------- 319 (384)
T 3oo3_A 259 -------IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITREK------- 319 (384)
T ss_dssp -------HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCSC-------
T ss_pred -------HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCCC-------
Confidence 8999999999999999779999999999999999999999999999999 999999999962
Q ss_pred cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCC
Q psy14413 517 LYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDE 561 (711)
Q Consensus 517 ~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~ 561 (711)
..++|||.|+|.|+|++||.+|++++++.|+++| +++++++.
T Consensus 320 ---~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~ 362 (384)
T 3oo3_A 320 ---ATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPE 362 (384)
T ss_dssp ---CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG
T ss_pred ---CCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCC
Confidence 3689999999999999999999999999999999 99987653
No 76
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=8.6e-36 Score=332.19 Aligned_cols=211 Identities=27% Similarity=0.488 Sum_probs=179.4
Q ss_pred hhhHHHHHHhhhc--cCchhhHHHHHHHHHHhc-cCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHH
Q psy14413 4 ADKTEIVSDHKKN--TDKFYDLVSAYIEEMKAR-SNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR 80 (711)
Q Consensus 4 ~~~~~~~~~~~~~--~~~~~d~l~~~l~~~~~~-~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 80 (711)
++..++++++++. .....|+++.+++...+. .+.+..+++++++++++.+++||+|||+++++|++++|++||++|+
T Consensus 225 ~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~ 304 (477)
T 1r9o_A 225 SYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTA 304 (477)
T ss_dssp HHHHHHHHHHHHTCCTTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHhccCCCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHH
Confidence 4556677777654 233469999999765432 2234569999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhC---CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCC
Q psy14413 81 KIQEEIDSLN---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW 157 (711)
Q Consensus 81 ~l~~Ei~~~~---~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~ 157 (711)
++++|++++. ..++.+++.+|||+++||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|
T Consensus 305 kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~ 384 (477)
T 1r9o_A 305 KVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF 384 (477)
T ss_dssp HHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS
T ss_pred HHHHHHHHhcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccC
Confidence 9999999883 3478889999999999999999999999977899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 158 GDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 158 ~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+||++|+||||++.+ +....+..|+|||.|+|. |+|+.||..+++++++.++.+|++
T Consensus 385 ~dP~~F~PeR~l~~~-~~~~~~~~~~pFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 441 (477)
T 1r9o_A 385 PNPEMFDPHHFLDEG-GNFKKSKYFMPFSAGKRI-----------CVGEALAGMELFLFLTSILQNFNL 441 (477)
T ss_dssp SSTTSCCGGGGBCTT-SCBCCCTTCCTTCCGGGS-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCccccCccceECCC-CCcCccccccCCCCccCC-----------CCCHHHHHHHHHHHHHHHHHhcEE
Confidence 999999999999643 222345689999999987 556666666788888888888775
No 77
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=1.1e-35 Score=331.77 Aligned_cols=211 Identities=29% Similarity=0.552 Sum_probs=178.8
Q ss_pred hhhHHHHHHhhhcc--CchhhHHHHHHHHHHhcc-CCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHH
Q psy14413 4 ADKTEIVSDHKKNT--DKFYDLVSAYIEEMKARS-NKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR 80 (711)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~d~l~~~l~~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 80 (711)
++..++++++++.. ....|+++.+++...+.. +.+..++++++++++..+++||+|||+++++|++++|++||++|+
T Consensus 229 ~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~ 308 (481)
T 3czh_A 229 DFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQG 308 (481)
T ss_dssp HHHHHHHHHHHTTCCTTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHH
Confidence 45566777776542 234699999998754422 223469999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhC---CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCC
Q psy14413 81 KIQEEIDSLN---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW 157 (711)
Q Consensus 81 ~l~~Ei~~~~---~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~ 157 (711)
++++|++++. ..++.+++.+|||+++||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|
T Consensus 309 kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~ 388 (481)
T 3czh_A 309 QVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW 388 (481)
T ss_dssp HHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTC
T ss_pred HHHHHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccC
Confidence 9999999873 4578889999999999999999999999977899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 158 GDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 158 ~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+||++|+||||++++. ....+..|+|||.|+|. |+|+.+|..+++++++.++.+|++
T Consensus 389 ~dP~~F~PeR~l~~~~-~~~~~~~~lpFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 445 (481)
T 3czh_A 389 RDPEVFHPERFLDSSG-YFAKKEALVPFSLGRRH-----------CLGEHLARMEMFLFFTALLQRFHL 445 (481)
T ss_dssp SSTTSCCGGGGBCTTS-CBCCCTTCCTTCCSTTC-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCccccCCCceeCCCC-CCcCCcceeCCCCCCCC-----------CCCHHHHHHHHHHHHHHHHHheEE
Confidence 9999999999996432 22346789999999988 455555556688888888888764
No 78
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=8.7e-36 Score=332.06 Aligned_cols=211 Identities=29% Similarity=0.550 Sum_probs=178.7
Q ss_pred hhhHHHHHHhhhc--cCchhhHHHHHHHHHHhc-cCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHH
Q psy14413 4 ADKTEIVSDHKKN--TDKFYDLVSAYIEEMKAR-SNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR 80 (711)
Q Consensus 4 ~~~~~~~~~~~~~--~~~~~d~l~~~l~~~~~~-~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 80 (711)
+...++++++++. .+...|+++.+++.+.+. .+.+..++++++.+++..+++||+|||+++++|++++|++||++|+
T Consensus 224 ~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~ 303 (476)
T 1po5_A 224 TFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTE 303 (476)
T ss_dssp HHHHHHHHHHHTTCCTTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHH
Confidence 4456677777654 223469999999765432 2223458999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhC---CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCC
Q psy14413 81 KIQEEIDSLN---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW 157 (711)
Q Consensus 81 ~l~~Ei~~~~---~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~ 157 (711)
++++|++++. ..++.+++.+|||+++||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|
T Consensus 304 ~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~ 383 (476)
T 1po5_A 304 RVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYF 383 (476)
T ss_dssp HHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC
T ss_pred HHHHHHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCcccc
Confidence 9999999883 3478889999999999999999999999977899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 158 GDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 158 ~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+||++|+||||++.+ +....+..|+|||.|+|. |+|+.+|..+++++++.++.+|++
T Consensus 384 ~dp~~F~PeR~l~~~-~~~~~~~~~lpFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 440 (476)
T 1po5_A 384 ETPNTFNPGHFLDAN-GALKRNEGFMPFSLGKRI-----------CLGEGIARTELFLFFTTILQNFSI 440 (476)
T ss_dssp SSTTSCCGGGGBCTT-SCBCCCTTCCTTCCSTTC-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCccccCchhhCCCC-CCccCCccccCCCCcccc-----------CcchHHHHHHHHHHHHHHHhceEE
Confidence 999999999999643 222345689999999988 556666667788888888888765
No 79
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=1.7e-35 Score=329.71 Aligned_cols=211 Identities=26% Similarity=0.492 Sum_probs=179.1
Q ss_pred hhhHHHHHHhhhc--cCchhhHHHHHHHHHHhcc-CCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHH
Q psy14413 4 ADKTEIVSDHKKN--TDKFYDLVSAYIEEMKARS-NKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR 80 (711)
Q Consensus 4 ~~~~~~~~~~~~~--~~~~~d~l~~~l~~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 80 (711)
+...++++++++. .+...|+++.+++...+.. +++..+++++++++++.+++||+|||+++++|++++|++||++|+
T Consensus 224 ~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~ 303 (476)
T 2fdv_A 224 DFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEA 303 (476)
T ss_dssp HHHHHHHHHHHTTCCTTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHH
Confidence 4556667777654 2334799999998754321 234569999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCC---CCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCC
Q psy14413 81 KIQEEIDSLNK---EPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW 157 (711)
Q Consensus 81 ~l~~Ei~~~~~---~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~ 157 (711)
++++|++++.+ .++.+++.+|||+++||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|
T Consensus 304 ~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~ 383 (476)
T 2fdv_A 304 KVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF 383 (476)
T ss_dssp HHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC
T ss_pred HHHHHHHHhhcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhc
Confidence 99999998833 478889999999999999999999999977899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 158 GDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 158 ~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+||++|+||||++.+. ....+..|+|||.|+|. |+|+.+|..+++++++.++.+|++
T Consensus 384 ~dp~~F~PeR~l~~~~-~~~~~~~~lpFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 440 (476)
T 2fdv_A 384 SNPQDFNPQHFLNEKG-QFKKSDAFVPFSIGKRN-----------CFGEGLARMELFLFFTTVMQNFRL 440 (476)
T ss_dssp SSTTSCCGGGGBCTTS-CBCCCTTCCTTCCSTTC-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCccccCchhhCCCCC-CCCCCcCcccCCCCCCC-----------CCChHHHHHHHHHHHHHHHhhcEE
Confidence 9999999999997432 22345689999999988 555666666788888888888765
No 80
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=1.6e-35 Score=326.93 Aligned_cols=208 Identities=19% Similarity=0.270 Sum_probs=176.5
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
+...++++++++..+...|+++.+++.. .+++..+++++++++++.+++||+|||+++++|++++|++||++|++++
T Consensus 205 ~~~~~~i~~r~~~~~~~~d~l~~ll~~~---~~~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~ 281 (444)
T 2ve3_A 205 AELEKIIKARQQQPPSEEDALGILLAAR---DDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVR 281 (444)
T ss_dssp HHHHHHHHHHHTSCCCCSSHHHHHHHCB---CTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCccCHHHHHHhcc---ccCCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 4566777777766445679999988642 2233468999999999999999999999999999999999999999999
Q ss_pred HHHhhh--CCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCC
Q psy14413 84 EEIDSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161 (711)
Q Consensus 84 ~Ei~~~--~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~ 161 (711)
+|++.+ ...++.+++.+||||++||+|+||++|+++. .+|.+.+|++++|+.||||+.|.++.+++||||++|+||+
T Consensus 282 ~Ei~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 360 (444)
T 2ve3_A 282 QEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGG-GFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPE 360 (444)
T ss_dssp HHHHSSCCSSCCCHHHHTTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTT
T ss_pred HHHHHhccCCCCChhhhhcChHHHHHHHHHHhcCCCccC-ccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcC
Confidence 999987 3357788899999999999999999999996 7899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+|+||||++.+......+..++|||.|+|. |+|+.+|..++++.++.++.+|++
T Consensus 361 ~F~PeR~l~~~~~~~~~~~~~~pFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 414 (444)
T 2ve3_A 361 KFDPERFTPDGSATHNPPFAHVPFGGGLRE-----------CLGKEFARLEMKLFATRLIQQFDW 414 (444)
T ss_dssp SCCGGGSSTTSTTTTSCTTSCCTTCCGGGC-----------CSCHHHHHHHHHHHHHHHHHHEEE
T ss_pred ccCccccCCCCcccCCCCceeeCCCCCCcc-----------CccHHHHHHHHHHHHHHHHHhCEE
Confidence 999999997443222345679999999988 555555666688888888888764
No 81
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=7.2e-36 Score=331.33 Aligned_cols=208 Identities=18% Similarity=0.255 Sum_probs=180.0
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
+...+.+++++...+...|+++.+++. ..+++..+++++++++++.+++||+|||+++++|++++|+.||++|++++
T Consensus 214 ~~~~~~i~~r~~~~~~~~d~l~~ll~~---~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~ 290 (461)
T 3ld6_A 214 DIFYKAIQKRRQSQEKIDDILQTLLDA---TYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCY 290 (461)
T ss_dssp HHHHHHHHHHTTCCCCCCSHHHHHHTC---BCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcchhhhhHHh---hhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHH
Confidence 456677788887777788999998864 22344569999999999999999999999999999999999999999999
Q ss_pred HHHhhhC----CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCC
Q psy14413 84 EEIDSLN----KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 159 (711)
Q Consensus 84 ~Ei~~~~----~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~ 159 (711)
+|++++. ...+.+++.+||||+|||+|+||++|+++. ..|.+++|++++||.|||||.|+++.+++||||++|+|
T Consensus 291 ~Ei~~v~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~d 369 (461)
T 3ld6_A 291 LEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVE 369 (461)
T ss_dssp HHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTT
T ss_pred HHHHHHhcccccchhHHHHHHHhhhhheeeeccccCCchhc-cccccccceeeCCcccCCCCeeeechHhhcCCccccCC
Confidence 9999883 234667788999999999999999999986 78999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 160 PDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 160 p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
|++|+||||++++ +....+..|+|||.|+|. |+|+.||..+++++++.++.+|+++
T Consensus 370 P~~F~PeRfl~~~-~~~~~~~~~~pFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~~ 425 (461)
T 3ld6_A 370 RLDFNPDRYLQDN-PASGEKFAYVPFGAGRHR-----------CIGENFAYVQIKTIWSTMLRLYEFD 425 (461)
T ss_dssp TTSCCGGGGGSCC-HHHHSSSSSCTTCCGGGC-----------CSCHHHHHHHHHHHHHHHHHHEEEE
T ss_pred ccccCccccCCCC-cccCCCCccccCCCcCcC-----------ChhHHHHHHHHHHHHHHHHHhCEEE
Confidence 9999999999753 223346789999999987 5666667777888999999888763
No 82
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=332.67 Aligned_cols=212 Identities=29% Similarity=0.560 Sum_probs=178.6
Q ss_pred hhhHHHHHHhhhc--cCchhhHHHHHHHHHHhcc-CCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHH
Q psy14413 4 ADKTEIVSDHKKN--TDKFYDLVSAYIEEMKARS-NKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR 80 (711)
Q Consensus 4 ~~~~~~~~~~~~~--~~~~~d~l~~~l~~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 80 (711)
+...++++++++. .+...|+++.+++...+.. +.+..++++++.+++..+++||+|||+++++|++++|++||++|+
T Consensus 238 ~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~ 317 (495)
T 2hi4_A 238 WFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQR 317 (495)
T ss_dssp HHHHHHHHHHHHTCCTTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhhcccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHH
Confidence 4556677777664 2334799999997654321 123358999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhC---CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCC
Q psy14413 81 KIQEEIDSLN---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW 157 (711)
Q Consensus 81 ~l~~Ei~~~~---~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~ 157 (711)
++++|++++. ..++.+++.+|||+++||+|+||++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|
T Consensus 318 kl~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~ 397 (495)
T 2hi4_A 318 KIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELW 397 (495)
T ss_dssp HHHHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTC
T ss_pred HHHHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccC
Confidence 9999999883 3478889999999999999999999999977899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCC--cCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 158 GDPDVFRPERFIHPTSGEV--LYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 158 ~~p~~F~P~Rfl~~~~~~~--~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+||++|+||||++.+.... ..+..|+|||.|+|. |+|+.+|..++++.++.++.+|++
T Consensus 398 ~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 457 (495)
T 2hi4_A 398 EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRR-----------CIGEVLAKWEIFLFLAILLQQLEF 457 (495)
T ss_dssp SSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGC-----------CTTHHHHHHHHHHHHHHHHHHCEE
T ss_pred CCcCccCcccccCCCCcccccCCCCceeCCCCCCCC-----------CCCHHHHHHHHHHHHHHHHHhCEE
Confidence 9999999999997432211 135679999999988 555666666788888888888875
No 83
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=3.5e-35 Score=326.97 Aligned_cols=212 Identities=28% Similarity=0.518 Sum_probs=181.0
Q ss_pred hhhHHHHHHhhhccC--chhhHHHHHHHHHHhccC-CCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHH
Q psy14413 4 ADKTEIVSDHKKNTD--KFYDLVSAYIEEMKARSN-KTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR 80 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~--~~~d~l~~~l~~~~~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 80 (711)
+...+.++++++..+ ...|+++.++....+... .+..+++++++++++.+++||+|||+++++|++++|++||++|+
T Consensus 223 ~~~~~~i~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~ 302 (476)
T 3e6i_A 223 EYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEE 302 (476)
T ss_dssp HHHHHHHHHHHHTCCTTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHH
Confidence 345566666665432 246999999987654322 33468999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh---CCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCC
Q psy14413 81 KIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW 157 (711)
Q Consensus 81 ~l~~Ei~~~---~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~ 157 (711)
++++|++++ ...++.+++.+||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|
T Consensus 303 ~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~ 382 (476)
T 3e6i_A 303 KLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF 382 (476)
T ss_dssp HHHHHHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS
T ss_pred HHHHHHHHhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccC
Confidence 999999987 34577889999999999999999999999977899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 158 GDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 158 ~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
+||++|+||||++++ +....+..|+|||.|+|. |+|+.+|..++++.++.++.+|++.
T Consensus 383 ~~p~~F~PeR~l~~~-~~~~~~~~~~pFg~G~r~-----------C~G~~lA~~e~~~~l~~ll~~f~~~ 440 (476)
T 3e6i_A 383 PDPEKFKPEHFLNEN-GKFKYSDYFKPFSTGKRV-----------CAGEGLARMELFLLLCAILQHFNLK 440 (476)
T ss_dssp SSTTSCCGGGGBCTT-SSBCCCTTCCTTCCSTTC-----------CTTHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CCccccCchhhcCCC-CCccCccceecCCCCCcc-----------CccHHHHHHHHHHHHHHHHHhcEee
Confidence 999999999999753 333456789999999988 5666666677888899999888763
No 84
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=5.5e-35 Score=327.12 Aligned_cols=212 Identities=28% Similarity=0.529 Sum_probs=178.5
Q ss_pred hhHHHHHHhhhccC--chhhHHHHHHHHHHhccC-------CCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhC
Q psy14413 5 DKTEIVSDHKKNTD--KFYDLVSAYIEEMKARSN-------KTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRY 75 (711)
Q Consensus 5 ~~~~~~~~~~~~~~--~~~d~l~~~l~~~~~~~~-------~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~ 75 (711)
...++++++++..+ ...|+++.+++...+..+ ....++++++++++..+++||+|||+++++|++++|+.|
T Consensus 224 ~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~ 303 (494)
T 3swz_A 224 LLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHN 303 (494)
T ss_dssp HHHHHHHHHTTTCCTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhcccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhC
Confidence 34455666655432 356999999986543211 223589999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh---CCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhcc
Q psy14413 76 PHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMR 152 (711)
Q Consensus 76 p~~~~~l~~Ei~~~---~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~ 152 (711)
|++|+++++|++++ ...++.+++.+|||++|||+|+||++|++|..++|.+.+|++++||.|||||.|+++.+++||
T Consensus 304 P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~ 383 (494)
T 3swz_A 304 PQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHH 383 (494)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhC
Confidence 99999999999988 345788899999999999999999999999878999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-cCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 153 DQEHWGDPDVFRPERFIHPTSGEV-LYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 153 d~~~~~~p~~F~P~Rfl~~~~~~~-~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
||++|+||++|+||||++++.... .....|+|||.|+|. |+|+.+|..+++++++.++.+|++.
T Consensus 384 d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~-----------C~G~~~A~~e~~~~l~~ll~~f~~~ 448 (494)
T 3swz_A 384 NEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRS-----------CIGEILARQELFLIMAWLLQRFDLE 448 (494)
T ss_dssp CTTTSSSTTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGS-----------CSCHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CcccCCCcccCCcccccCCCCccccCCCCcccCCCCCCCC-----------CCcHHHHHHHHHHHHHHHHHhcEEe
Confidence 999999999999999997543322 245689999999987 5666666677888889998888763
No 85
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-35 Score=328.41 Aligned_cols=212 Identities=22% Similarity=0.400 Sum_probs=177.0
Q ss_pred hhHHHHHHhhhcc---CchhhHHHHHHHHHHhccCC-----CCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhCh
Q psy14413 5 DKTEIVSDHKKNT---DKFYDLVSAYIEEMKARSNK-----TSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYP 76 (711)
Q Consensus 5 ~~~~~~~~~~~~~---~~~~d~l~~~l~~~~~~~~~-----~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p 76 (711)
...++++++++.. +...|+++.+++......+. +..++++++.++++.+++||+|||+++++|++++|++||
T Consensus 231 ~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P 310 (507)
T 3pm0_A 231 FILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYP 310 (507)
T ss_dssp HHHHHHHHHHHHCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHhccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCH
Confidence 3445555555432 33579999999654332211 235899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhC---CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccC
Q psy14413 77 HVQRKIQEEIDSLN---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRD 153 (711)
Q Consensus 77 ~~~~~l~~Ei~~~~---~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d 153 (711)
++|+++++|++++. ..++.+++.+||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++|||
T Consensus 311 ~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d 390 (507)
T 3pm0_A 311 DVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHD 390 (507)
T ss_dssp HHHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCC
Confidence 99999999999873 457888999999999999999999999998789999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCc-CCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 154 QEHWGDPDVFRPERFIHPTSGEVL-YDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 154 ~~~~~~p~~F~P~Rfl~~~~~~~~-~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
|++|+||++|+||||++.+..... .+..++|||.|+|. |+|+.||..+++++++.++.+|++.
T Consensus 391 ~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~~ 454 (507)
T 3pm0_A 391 PLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRR-----------CIGEELSKMQLFLFISILAHQCDFR 454 (507)
T ss_dssp TTTCSSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTC-----------CSCHHHHHHHHHHHHHHHHHHEEEE
T ss_pred cccCCCcCccCCCcccCCCCcccCCCcccccCCCCCCCC-----------CCCHHHHHHHHHHHHHHHHHHeEEe
Confidence 999999999999999975432111 13589999999988 5666667777888899999888763
No 86
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=1.3e-34 Score=322.76 Aligned_cols=198 Identities=22% Similarity=0.392 Sum_probs=169.9
Q ss_pred HHHHHHhhhcc--CchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHH
Q psy14413 7 TEIVSDHKKNT--DKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQE 84 (711)
Q Consensus 7 ~~~~~~~~~~~--~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 84 (711)
.++++++.+.. +...|+++.++++ ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++
T Consensus 251 ~~~i~~r~~~~~~~~~~d~l~~ll~~--------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~ 322 (482)
T 3k9v_A 251 KPCIDNRLQRYSQQPGADFLCDIYQQ--------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQ 322 (482)
T ss_dssp HHHHHHHHHHTTTCTTSCHHHHHHHH--------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCchHHHHHHHhc--------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 34555554322 2345777776653 2489999999999999999999999999999999999999999999
Q ss_pred HHhhhC---CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCC
Q psy14413 85 EIDSLN---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161 (711)
Q Consensus 85 Ei~~~~---~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~ 161 (711)
|++++. ..++.+++.+|||++|||+|++|++|++|. ++|.+.+|++++||.|||||.|.++.+++||||++|+||+
T Consensus 323 Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~ 401 (482)
T 3k9v_A 323 EVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSH 401 (482)
T ss_dssp HHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTT
T ss_pred HHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcC
Confidence 999883 457889999999999999999999999996 8999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+|+||||++.+.. ..+..|+|||.|+|. |+|+.+|..+++++++.++.+|++
T Consensus 402 ~F~PeRfl~~~~~--~~~~~~~pFg~G~r~-----------C~G~~~A~~e~~~~la~ll~~f~~ 453 (482)
T 3k9v_A 402 KFRPERWLQKEKK--INPFAHLPFGIGKRM-----------CIGRRLAELQLHLALCWIIQKYDI 453 (482)
T ss_dssp SCCGGGGTCTTSC--CCGGGCCTTCCSTTS-----------CSCHHHHHHHHHHHHHHHHHHEEE
T ss_pred ccCccccCCCCCC--CCCccccCCCCCCcC-----------CccHHHHHHHHHHHHHHHHHhcEE
Confidence 9999999975432 346789999999988 556666667788888989888875
No 87
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=3e-34 Score=313.00 Aligned_cols=160 Identities=24% Similarity=0.349 Sum_probs=149.8
Q ss_pred cccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCChhHHHHHHHHhcC
Q psy14413 375 KRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRH 454 (711)
Q Consensus 375 ~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lpyl~a~i~E~lRl 454 (711)
..++.+++++++..++..+++||+|||+++++|++++|++||++|+|+++|. .++.++++|++|+
T Consensus 230 ~~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~---------------~~~~~~~eE~lR~ 294 (412)
T 4dnj_A 230 FSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP---------------SLARNAFEEAVRF 294 (412)
T ss_dssp TTTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG---------------GGHHHHHHHHHHH
T ss_pred hhhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc---------------cccccccceeeee
Confidence 3456679999999999999999999999999999999999999999999864 3788999999999
Q ss_pred CCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCcc
Q psy14413 455 GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLG 534 (711)
Q Consensus 455 ~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G 534 (711)
+|+++ .+.|.+++|++++|+.||||+.|.++.+++||||++|+||++|+||||.. .|+|||.|+|.|+|
T Consensus 295 ~pp~~-~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~~----------~~lpFG~G~r~CiG 363 (412)
T 4dnj_A 295 ESPVQ-TFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTS----------GHVGFGSGVHMCVG 363 (412)
T ss_dssp HCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCT----------TCCTTCCSTTSCTT
T ss_pred cCCcc-cccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCCC----------CCCCcCCCCcCChh
Confidence 99998 78999999999999999999999999999999999999999999999843 47999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHc-eeeCCCC
Q psy14413 535 EPMARTSLFIFLSSLLYHF-NISIPSD 560 (711)
Q Consensus 535 ~~lA~~e~~~~l~~ll~~f-~~~~~~~ 560 (711)
++||++|++++++.|+++| +++++++
T Consensus 364 ~~lA~~E~~~~l~~Ll~rf~~~~l~~~ 390 (412)
T 4dnj_A 364 QLVARLEGEVVLAALARKVAAIEIAGP 390 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeECCC
Confidence 9999999999999999999 8998654
No 88
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=6.7e-35 Score=322.92 Aligned_cols=208 Identities=21% Similarity=0.295 Sum_probs=172.8
Q ss_pred hhhHHHHHHhhhccCc---hhhHHHHHHHHHHhccCCCCC-CCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHH
Q psy14413 4 ADKTEIVSDHKKNTDK---FYDLVSAYIEEMKARSNKTSS-FSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQ 79 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~---~~d~l~~~l~~~~~~~~~~~~-~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~ 79 (711)
+...++++++++..+. ..|+++.+++.. .+++.. +++++++++++.+++||+|||+++++|++++|++||++|
T Consensus 203 ~~~~~~i~~r~~~~~~~~~~~dll~~ll~~~---~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~ 279 (455)
T 2cib_A 203 ALVADIMNGRIANPPTDKSDRDMLDVLIAVK---AETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAY 279 (455)
T ss_dssp HHHHHHHHHHHHCC-----CCCHHHHHHHCB---CTTSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHhcccCCCCcccHHHHHHHhh---hhcCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHH
Confidence 3455667777655432 238999988642 122234 899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhC---CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCC
Q psy14413 80 RKIQEEIDSLN---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEH 156 (711)
Q Consensus 80 ~~l~~Ei~~~~---~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~ 156 (711)
+++++|++++. ..++.+++.+|||+++||+|+||++|+++. ++|.+.+|++++|+.|||||.|.++.+++||||++
T Consensus 280 ~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~ 358 (455)
T 2cib_A 280 AAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPED 358 (455)
T ss_dssp HHHHHHHHHHGGGCCCHHHHTTSCCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHHHHHHHhCCCCCCCHHHHhcCHHHHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCccc
Confidence 99999999873 345678899999999999999999999885 89999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 157 WGDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 157 ~~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
|+||++|+||||++.+......+..|+|||.|+|. |+|+.+|..++++.++.++.+|++
T Consensus 359 ~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 417 (455)
T 2cib_A 359 FPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHR-----------CVGAAFAIMQIKAIFSVLLREYEF 417 (455)
T ss_dssp SSSTTSCCGGGGSTTTCHHHHCTTTCCTTCCGGGC-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCCccccCcccCCCCCcccccCCccccCCCCCCCC-----------CCcHHHHHHHHHHHHHHHHHheEE
Confidence 99999999999996432111125689999999988 556666667788888888888765
No 89
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=1e-34 Score=325.01 Aligned_cols=206 Identities=26% Similarity=0.480 Sum_probs=171.8
Q ss_pred hhhHHHHHHhhhcc--CchhhHHHHHHHHHHhccC-CC-CCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHH
Q psy14413 4 ADKTEIVSDHKKNT--DKFYDLVSAYIEEMKARSN-KT-SSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQ 79 (711)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~d~l~~~l~~~~~~~~-~~-~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~ 79 (711)
+...++++++++.. +...|+++.+++...+... .+ ..++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus 234 ~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~ 313 (496)
T 3qz1_A 234 HMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQ 313 (496)
T ss_dssp HHHHHHHHHHHHSCCSSCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHhhccCCCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHH
Confidence 34556667666543 2456899988865432211 11 26999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhC-------CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhcc
Q psy14413 80 RKIQEEIDSLN-------KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMR 152 (711)
Q Consensus 80 ~~l~~Ei~~~~-------~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~ 152 (711)
+++++|++++. ..+ .+++.+|||++|||+|++|++|+++..++|.+.+|++++|+.|||||.|.++.+++||
T Consensus 314 ~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~ 392 (496)
T 3qz1_A 314 RRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHL 392 (496)
T ss_dssp HHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTT
T ss_pred HHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhC
Confidence 99999999872 234 7789999999999999999999999878999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 153 DQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 153 d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
||++|+||++|+||||++++. ...++|||.|+|. |+|+.+|..++++.++.++.+|++
T Consensus 393 d~~~~~dp~~F~PeR~l~~~~-----~~~~~pFg~G~r~-----------C~G~~lA~~e~~~~l~~ll~~f~~ 450 (496)
T 3qz1_A 393 DETVWEQPHEFRPDRFLEPGA-----NPSALAFGCGARV-----------CLGESLARLELFVVLARLLQAFTL 450 (496)
T ss_dssp CTTTSSSTTSCCCCCCC---C-----CCCCCSSCCSSSS-----------CSSHHHHHHHHHHHHHHHHHHCCC
T ss_pred ChhhcCCcccCCcccccCCCC-----CcCccCCCCCCCC-----------CccHHHHHHHHHHHHHHHHHhcEE
Confidence 999999999999999997431 2389999999988 556666667788888989888875
No 90
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=8.3e-35 Score=323.35 Aligned_cols=208 Identities=20% Similarity=0.327 Sum_probs=175.3
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
++...++++++++..+...|+++.+++...+ ++..++++++.++++.+++||+|||+++++|++++|++||++|+++
T Consensus 224 ~~~~~~~i~~r~~~~~~~~dll~~ll~~~~~---~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l 300 (467)
T 3dbg_A 224 HLLVDEIIAERRASGQKPDDLLTALLEAKDD---NGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRI 300 (467)
T ss_dssp HHHHHHHHHHHTTCCSSCCSHHHHHTTC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHhhccC---CCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3456677888877766677999998864322 2235899999999999999999999999999999999999999999
Q ss_pred HHHHhhh--CCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCC
Q psy14413 83 QEEIDSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160 (711)
Q Consensus 83 ~~Ei~~~--~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p 160 (711)
++|++++ ...++.+++.+|||+++||+|+||++|+++. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||
T Consensus 301 r~Ei~~~~~~~~~~~~~l~~l~yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP 379 (467)
T 3dbg_A 301 RDEVEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDN 379 (467)
T ss_dssp HHHHHHHHTTSCCCHHHHTTCHHHHHHHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTT
T ss_pred HHHHHHHhCCCCCCHHHHhhCHHHHHHHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCc
Confidence 9999987 3457788999999999999999999999986 899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 161 DVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 161 ~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
++|+|+||++.+. ....+..++|||.|+|. |+|+.||..++++.++.++.+|++
T Consensus 380 ~~F~PeRfl~~~~-~~~~~~~~~~FG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 433 (467)
T 3dbg_A 380 LEFDPDRWLPERA-ANVPKYAMKPFSAGKRK-----------CPSDHFSMAQLTLITAALATKYRF 433 (467)
T ss_dssp TCCCGGGGSHHHH-TTSCTTSCCSSCSSSSS-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred cccCCccCCCCcc-ccCCCccccCCCCCCCC-----------CccHHHHHHHHHHHHHHHHHhcee
Confidence 9999999996432 22245689999999998 555666666788888888888775
No 91
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=8.3e-35 Score=324.83 Aligned_cols=195 Identities=26% Similarity=0.418 Sum_probs=166.3
Q ss_pred chhhHHHHHHHHHHhcc-CCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhh---CCCCC
Q psy14413 19 KFYDLVSAYIEEMKARS-NKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPT 94 (711)
Q Consensus 19 ~~~d~l~~~l~~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~---~~~~~ 94 (711)
...|+++.+++...... +.+..+++++++++++.+++||+|||+++++|++++|++||++|+++++|++++ ...++
T Consensus 245 ~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~ 324 (485)
T 3nxu_A 245 HRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT 324 (485)
T ss_dssp -CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCCC
T ss_pred CcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCC
Confidence 45699999997643321 123469999999999999999999999999999999999999999999999987 34577
Q ss_pred ccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCC
Q psy14413 95 ILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSG 174 (711)
Q Consensus 95 ~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~ 174 (711)
.+++.+|||++|||+|+||++|+++. ++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||++.+.
T Consensus 325 ~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~- 402 (485)
T 3nxu_A 325 YDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK- 402 (485)
T ss_dssp HHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHHH-
T ss_pred HHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCcc-
Confidence 88899999999999999999999986 8999999999999999999999999999999999999999999999996432
Q ss_pred CCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 175 EVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 175 ~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
....+..|+|||.|+|. |+|+.+|..+++++++.++.+|++
T Consensus 403 ~~~~~~~~~pFg~G~r~-----------C~G~~lA~~e~~~~l~~ll~~f~~ 443 (485)
T 3nxu_A 403 DNIDPYIYTPFGSGPRN-----------CIGMRFALMNMKLALIRVLQNFSF 443 (485)
T ss_dssp TTSCTTTCCTTCCSTTS-----------CTTHHHHHHHHHHHHHHHHTTEEE
T ss_pred ccCCCCCccCCCCCCcC-----------CchHHHHHHHHHHHHHHHHHhcEE
Confidence 22345689999999988 555666666788888888888876
No 92
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=2.1e-34 Score=319.07 Aligned_cols=200 Identities=21% Similarity=0.308 Sum_probs=170.6
Q ss_pred hHHHHHHhhhc----cCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHH
Q psy14413 6 KTEIVSDHKKN----TDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81 (711)
Q Consensus 6 ~~~~~~~~~~~----~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~ 81 (711)
..++++++++. .+...|+++.+++.. +..++++++.++++.+++||+|||+++++|++++|++||++|++
T Consensus 206 ~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~k 279 (456)
T 3mdm_A 206 GRDWVQRRREALKRGEEVPADILTQILKAE------EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVAR 279 (456)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCHHHHHHHHT------SSCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhhccccchhhHHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 34455555432 123468999998642 23478899999999999999999999999999999999999999
Q ss_pred HHHHHhhhC---CCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCC
Q psy14413 82 IQEEIDSLN---KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 158 (711)
Q Consensus 82 l~~Ei~~~~---~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~ 158 (711)
+++|++++. ..++.+++.+|||++|||+|+||++|+++. ..|++.+|++++||.|||||.|.++.+++||||++|+
T Consensus 280 l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~ 358 (456)
T 3mdm_A 280 LQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFE 358 (456)
T ss_dssp HHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCCSSCC-EEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSS
T ss_pred HHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCCCccc-cccccCCceeECCEEECCCCEEEeehHHhcCCchhcC
Confidence 999999873 456778899999999999999999999984 7899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 159 DPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 159 ~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
||++|+||||++... .....++|||.|+|. |+|+.||..+++++++.++.+|++
T Consensus 359 dp~~F~PeRfl~~~~---~~~~~~~pFg~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 412 (456)
T 3mdm_A 359 DPLTFNPDRFGPGAP---KPRFTYFPFSLGHRS-----------CIGQQFAQMEVKVVMAKLLQRLEF 412 (456)
T ss_dssp STTSCCGGGGSTTSC---CCSSSCCTTCCGGGS-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CccccCccccCCCCC---CCCCcccCCCCCCcC-----------CCCHHHHHHHHHHHHHHHHHhCeE
Confidence 999999999997432 235689999999987 566666667788889999888876
No 93
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=2.7e-34 Score=319.46 Aligned_cols=207 Identities=24% Similarity=0.419 Sum_probs=174.5
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
+...++++++++......|+++.+++... .+++..++++++.+++..+++||+|||+++++|++++|++||++|++++
T Consensus 214 ~~~~~~i~~r~~~~~~~~dll~~ll~~~~--~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~ 291 (470)
T 2ij2_A 214 DLVDKIIADRKASGEQSDDLLTHMLNGKD--PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291 (470)
T ss_dssp HHHHHHHHHHHHHCCCCSSHHHHHHHCCC--TTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCchhHHHHHHhccC--cccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 45566777777666556799999886421 1123469999999999999999999999999999999999999999999
Q ss_pred HHHhhh--CCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecC-eeeCCCCEEEechhhhccCCCCC-CC
Q psy14413 84 EEIDSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGS-YVIPQDSIILVNLWSIMRDQEHW-GD 159 (711)
Q Consensus 84 ~Ei~~~--~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g-~~ip~Gt~v~~~~~~~~~d~~~~-~~ 159 (711)
+|++++ ...++.+++.+|||+++||+|+||++|+++. ..|.+.+|++++| |.|||||.|.++.+++||||++| +|
T Consensus 292 ~Ei~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~d 370 (470)
T 2ij2_A 292 EEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDD 370 (470)
T ss_dssp HHHHHHCCSSSCCHHHHHTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSC
T ss_pred HHHHHHcCCCCCCHHHHhCCHHHHHHHHHHHhcCCCccc-cceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCC
Confidence 999987 3346778899999999999999999999996 7899999999999 99999999999999999999999 89
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 160 PDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 160 p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
|++|+|||| ++ .....+..|+|||.|+|. |+|+.||..++++.++.++.+|++.
T Consensus 371 P~~F~PeR~-~~--~~~~~~~~~~pFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~~ 424 (470)
T 2ij2_A 371 VEEFRPERF-EN--PSAIPQHAFKPFGNGQRA-----------CIGQQFALHEATLVLGMMLKHFDFE 424 (470)
T ss_dssp TTSCCGGGG-SS--GGGSCTTSCCTTCCGGGS-----------CTTHHHHHHHHHHHHHHHHHHEEEE
T ss_pred ccccCcccc-CC--CCcCCCccccCCCCCCCc-----------CCcHHHHHHHHHHHHHHHHHHeeEe
Confidence 999999999 31 111234689999999988 5555666667888888898888764
No 94
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=9.7e-34 Score=316.37 Aligned_cols=185 Identities=17% Similarity=0.269 Sum_probs=163.1
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhh---CCCCCcc
Q psy14413 20 FYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTIL 96 (711)
Q Consensus 20 ~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~---~~~~~~~ 96 (711)
..|+++.++++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++ ...++.+
T Consensus 258 ~~d~l~~ll~~--------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~ 329 (487)
T 3n9y_A 258 YRGILYRLLGD--------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMAT 329 (487)
T ss_dssp CCCHHHHHHHS--------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred hHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcccccchhh
Confidence 46788877741 248999999999999999999999999999999999999999999999987 3445578
Q ss_pred ccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCC
Q psy14413 97 DRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEV 176 (711)
Q Consensus 97 ~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~ 176 (711)
++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.+. .
T Consensus 330 ~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~--~ 406 (487)
T 3n9y_A 330 MLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDK--N 406 (487)
T ss_dssp HTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTCSCT--T
T ss_pred hhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCcccCChhhcCCCCC--C
Confidence 899999999999999999999984 8999999999999999999999999999999999999999999999997432 2
Q ss_pred cCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 177 LYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 177 ~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
..+..++|||.|+|. |+|+.+|..+++++++.++.+|++
T Consensus 407 ~~~~~~~pFg~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 445 (487)
T 3n9y_A 407 ITYFRNLGFGWGVRQ-----------CLGRRIAELEMTIFLINMLENFRV 445 (487)
T ss_dssp SSTTTCCTTCCGGGS-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCCCCCCCCCCCCCC-----------CchHHHHHHHHHHHHHHHHHhCEE
Confidence 245789999999987 566666667788888888888875
No 95
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=4.9e-34 Score=316.57 Aligned_cols=208 Identities=18% Similarity=0.253 Sum_probs=177.5
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
+...++++++++..+...|+++.+++.. .+++..+++++++.+++.+++||+|||+++++|++++|++||++|++++
T Consensus 214 ~~~~~~i~~~~~~~~~~~d~l~~ll~~~---~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~ 290 (461)
T 3i3k_A 214 DIFYKAIQKRRQSQEKIDDILQTLLDAT---YKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCY 290 (461)
T ss_dssp HHHHHHHHHHTTCCCCCCSHHHHHHTCB---CTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHhh---hccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 4556677777776666789999988642 2233459999999999999999999999999999999999999999999
Q ss_pred HHHhhhCC----CCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCC
Q psy14413 84 EEIDSLNK----EPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 159 (711)
Q Consensus 84 ~Ei~~~~~----~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~ 159 (711)
+|++++.+ ..+.+++.++||+++||+|++|++|+++. ++|.+.+|++++||.||||+.|+++.+++|+||++|+|
T Consensus 291 ~Ei~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~ 369 (461)
T 3i3k_A 291 LEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVE 369 (461)
T ss_dssp HHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTT
T ss_pred HHHHHHhcCCCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCC
Confidence 99998833 33677889999999999999999999974 89999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 160 PDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 160 p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
|++|+||||++.+ +....+..|+|||.|+|. |+|+.+|..+++++++.++.+|++.
T Consensus 370 p~~F~P~Rfl~~~-~~~~~~~~~~~Fg~G~r~-----------C~G~~~A~~e~~~~l~~ll~~f~~~ 425 (461)
T 3i3k_A 370 RLDFNPDRYLQDN-PASGEKFAYVPFGAGRHR-----------CIGENFAYVQIKTIWSTMLRLYEFD 425 (461)
T ss_dssp TTCCCGGGGGSCC-HHHHSSSSSCTTCCGGGC-----------CSCHHHHHHHHHHHHHHHHHHEEEE
T ss_pred cccCCCCCCCCCC-CCCCCCcceeCCCCCCCC-----------CcCHHHHHHHHHHHHHHHHHhCeEE
Confidence 9999999999743 222245689999999987 5666666677888889998888763
No 96
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=2.7e-33 Score=314.02 Aligned_cols=200 Identities=21% Similarity=0.332 Sum_probs=170.9
Q ss_pred hhhHHHHHHhhhccC------chhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChH
Q psy14413 4 ADKTEIVSDHKKNTD------KFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPH 77 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~------~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~ 77 (711)
+...++++++++..+ +..|+++.+++...+ .++++++++++++.+++||+|||+++++|++++|++||+
T Consensus 253 ~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-----~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~ 327 (503)
T 3s79_A 253 DAIEVLIAEKRRRISTEEKLEECMDFATELILAEKR-----GDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPN 327 (503)
T ss_dssp HHHHHHHHHHHHHHHTCTTTTTTCCHHHHHHHHHHT-----TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHhhcccccchHHHHHHHHHHhccc-----CCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHH
Confidence 445556666654321 234899999876321 358999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh--CCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCC
Q psy14413 78 VQRKIQEEIDSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQE 155 (711)
Q Consensus 78 ~~~~l~~Ei~~~--~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~ 155 (711)
+|+|+++|++++ ...++.+++.+|||+++||+|++|++|+++. ..|.+++|++++||.|||||.|.++.+++||| +
T Consensus 328 ~~~kl~~Ei~~v~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~ 405 (503)
T 3s79_A 328 VEEAIIKEIQTVIGERDIKIDDIQKLKVMENFIYESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-E 405 (503)
T ss_dssp HHHHHHHHHHHHTTTSCCCHHHHTTCHHHHHHHHHHHHHSCSSCC-EEEECSSCEEETTEEECTTCEEEECHHHHTTT-S
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHhhhccCCCccc-ccccccCCeeECCEEECCCCEEEeehHHhCCC-c
Confidence 999999999988 4457788999999999999999999999997 66999999999999999999999999999999 9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 156 HWGDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 156 ~~~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+|+||++|+||||++.. ....|+|||.|+|. |+|+.+|..++++.++.++.+|++
T Consensus 406 ~~~dp~~F~PeRf~~~~-----~~~~~~pFg~G~r~-----------C~G~~lA~~e~~~~l~~ll~~f~~ 460 (503)
T 3s79_A 406 FFPKPNEFTLENFAKNV-----PYRYFQPFGFGPRG-----------CAGKYIAMVMMKAILVTLLRRFHV 460 (503)
T ss_dssp SCSSTTSCCGGGGSSCC-----CTTTCCSSCCSTTS-----------CTTHHHHHHHHHHHHHHHHTTEEE
T ss_pred cCCChhhCChhhcCCCC-----CcccccCCCCCCCC-----------CCcHHHHHHHHHHHHHHHHHheEE
Confidence 99999999999999642 24579999999988 556666667788888888888876
No 97
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.98 E-value=3.9e-33 Score=308.06 Aligned_cols=201 Identities=20% Similarity=0.317 Sum_probs=172.6
Q ss_pred hhhHHHHHHhhhcc----CchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH--hChH
Q psy14413 4 ADKTEIVSDHKKNT----DKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLI--RYPH 77 (711)
Q Consensus 4 ~~~~~~~~~~~~~~----~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~ 77 (711)
+...++++++++.. +...|+++.+++.. .+++..+++++++++++.+++||+|||+++++|++++|+ .||+
T Consensus 211 ~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~---~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~ 287 (450)
T 3gw9_A 211 KILSEIIIARKEEEVNKDSSTSDLLSGLLSAV---YRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVK 287 (450)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCCSHHHHHHHCB---CTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHH
T ss_pred HHHHHHHHHHHHhhcccCCccchHHHHHHHhh---ccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchh
Confidence 34555666665432 34579999998642 223446999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHhhhCCCCCcccc-CCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCC
Q psy14413 78 VQRKIQEEIDSLNKEPTILDR-YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEH 156 (711)
Q Consensus 78 ~~~~l~~Ei~~~~~~~~~~~~-~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~ 156 (711)
+|+++++|++++...++.+++ .+|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++
T Consensus 288 ~~~~l~~Ei~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~ 366 (450)
T 3gw9_A 288 HLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLM-LMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 366 (450)
T ss_dssp HHHHHHHHHTTCCSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHHHHHHHhccCCCChHHHHHhcHHHHHHHHHHHHhCCchhc-cccccccccccCCEEECCCCEEEEChHHhhCChhh
Confidence 999999999998667788888 8999999999999999999986 78999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 157 WGDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 157 ~~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
|+||++|+|||+.. .+..|+|||.|+|. |+|+.+|..+++++++.++.+|++
T Consensus 367 ~~dp~~F~PeR~~~-------~~~~~~~Fg~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 418 (450)
T 3gw9_A 367 FPEPRRWDPERDEK-------VEGAFIGFGAGVHK-----------CIGQKFGLLQVKTILATAFRSYDF 418 (450)
T ss_dssp SSSTTSCCTTCCCS-------STTCCCTTCCGGGC-----------CSSHHHHHHHHHHHHHHHHHHEEE
T ss_pred cCCccccCCCcCcC-------CCCceeCCCCCCCC-----------CccHHHHHHHHHHHHHHHHHHceE
Confidence 99999999999321 24689999999987 566666777788889999888875
No 98
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.97 E-value=6.1e-33 Score=310.23 Aligned_cols=193 Identities=20% Similarity=0.252 Sum_probs=164.2
Q ss_pred CchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCC------
Q psy14413 18 DKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNK------ 91 (711)
Q Consensus 18 ~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~------ 91 (711)
+...|+++.+++...+.. .++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++.+
T Consensus 234 ~~~~d~l~~ll~~~~~~~----~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~ 309 (491)
T 3dax_A 234 ESISELISLRMFLNDTLS----TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKV 309 (491)
T ss_dssp BSCCHHHHHHHHHHHHHB----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCC
T ss_pred cchhHHHHHHHHHHHhcC----CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhcccccc
Confidence 345689998887654322 3789999999999999999999999999999999999999999999998721
Q ss_pred -------CCCccccCCCchhHHHhhhccccccCCccccceecccccee----cCeeeCCCCEEEechhhhccCCCCCCCC
Q psy14413 92 -------EPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRL----GSYVIPQDSIILVNLWSIMRDQEHWGDP 160 (711)
Q Consensus 92 -------~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l----~g~~ip~Gt~v~~~~~~~~~d~~~~~~p 160 (711)
..+.+++.+||||+|||+|+||++|+ +. ++|.+.+|+++ +||.|||||.|+++.+++||||++|+||
T Consensus 310 ~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp 387 (491)
T 3dax_A 310 SLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDP 387 (491)
T ss_dssp CSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSST
T ss_pred ccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCH
Confidence 24778889999999999999999975 54 88999999999 7899999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC--------CcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 161 DVFRPERFIHPTSGE--------VLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 161 ~~F~P~Rfl~~~~~~--------~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
++|+||||++.+... ...+..|+|||.|+|. |+|+.||..++++++|.++.+|++.
T Consensus 388 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~-----------C~G~~~A~~e~~~~la~ll~~f~~~ 451 (491)
T 3dax_A 388 LTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATI-----------CPGRLFAIHEIKQFLILMLSYFELE 451 (491)
T ss_dssp TSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEE-----------CTTHHHHHHHHHHHHHHHHHHEEEE
T ss_pred HHcCCccccCCCccccccccccCcCCccccccCCCCCCC-----------CCcHHHHHHHHHHHHHHHHHHeeEE
Confidence 999999999643211 0135689999999987 6667777778899999999998763
No 99
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.97 E-value=1.5e-32 Score=293.31 Aligned_cols=147 Identities=20% Similarity=0.202 Sum_probs=128.9
Q ss_pred HHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCChhHHHHHHHHhcCCCCCCcccceecc
Q psy14413 388 VLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAM 467 (711)
Q Consensus 388 ~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~ 467 (711)
.+++.+++||+|||+++++|++++|++||++++++++|++ |++++|+|+||++|+++ .++|.++
T Consensus 214 ~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------~l~~~i~E~LR~~pp~~-~~~R~a~ 277 (381)
T 2yjn_B 214 DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA---------------AAQRTVAEVLRLHPALH-LERRTAT 277 (381)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC-----------------HHHHHHHHHHSCSCS-EEEEEES
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH---------------HHHHHhCeeeeecCCCc-ceeEEEC
Confidence 6788899999999999999999999999999999999864 89999999999999999 5889999
Q ss_pred cccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCCccccCCCCCCCccHHHHHHHHHHHHH
Q psy14413 468 KTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLS 547 (711)
Q Consensus 468 ~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~ 547 (711)
+|++++|+.||||+.|.++.+++||||++|+||++|||+||++ ..++|||.| |.|+|+.||++|++++++
T Consensus 278 ~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~---------~~~l~FG~G-h~C~G~~lA~~e~~~~l~ 347 (381)
T 2yjn_B 278 AEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA---------DRALSAHRG-HPGRLEELVTALATAALR 347 (381)
T ss_dssp SCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC---------CCCCC-----CCSSHHHHHHHHHHHHHH
T ss_pred CCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC---------CCccCCCCC-CCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999974 358999999 999999999999999999
Q ss_pred HHHHHc-eeeCCCC
Q psy14413 548 SLLYHF-NISIPSD 560 (711)
Q Consensus 548 ~ll~~f-~~~~~~~ 560 (711)
.|+++| +++++++
T Consensus 348 ~ll~~~p~~~l~~~ 361 (381)
T 2yjn_B 348 AAAKALPGLTPSGP 361 (381)
T ss_dssp HTTTTCCC-----C
T ss_pred HHHHhCCCcEECCC
Confidence 999999 9998754
No 100
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.97 E-value=2.2e-32 Score=304.36 Aligned_cols=191 Identities=13% Similarity=0.208 Sum_probs=153.6
Q ss_pred CchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCCCCCccc
Q psy14413 18 DKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILD 97 (711)
Q Consensus 18 ~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~ 97 (711)
+...|+++.+++...+. ..++++++. +++.+++||+|||+++++|++++|++||++|+++++|++.....++.++
T Consensus 231 ~~~~d~l~~ll~~~~~~----~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~ 305 (475)
T 3b98_A 231 PREQSWLGSYVKQLQDE----GIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQGGKHLRLEER 305 (475)
T ss_dssp CCTTSHHHHHHHHHHHT----TCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC----------
T ss_pred ccccHHHHHHHHHHHHc----CCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhcCCCCCCHHH
Confidence 34579999998765432 247788888 8899999999999999999999999999999999999984334467889
Q ss_pred cCCCchhHHHhhhccccccCCccccceecccccee-----cCeeeCCCCEEEechhh-hccCCCCCCCCCCCCCCCCCCC
Q psy14413 98 RYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRL-----GSYVIPQDSIILVNLWS-IMRDQEHWGDPDVFRPERFIHP 171 (711)
Q Consensus 98 ~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l-----~g~~ip~Gt~v~~~~~~-~~~d~~~~~~p~~F~P~Rfl~~ 171 (711)
+.+|||+++||+|+||++|+ + .++|.+.+|+++ +||.||||+.|+++.++ +||||++|+||++|+||||++.
T Consensus 306 ~~~lpyl~a~i~E~lRl~p~-~-~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~ 383 (475)
T 3b98_A 306 QKNTPVFDSVLWETLRLTAA-A-LITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNA 383 (475)
T ss_dssp --CCHHHHHHHHHHHHHHEE-E-CEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCT
T ss_pred HhcCHHHHHHHHHHHhcCCc-c-ceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCC
Confidence 99999999999999999986 6 489999999999 88999999999999999 9999999999999999999964
Q ss_pred CCCC--------CcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 172 TSGE--------VLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 172 ~~~~--------~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+... ...+..++|||.|+|. |+|+.+|..+++++++.++.+|++
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~pFG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~ 435 (475)
T 3b98_A 384 DRTEKKDFFKNGARVKYPSVPWGTEDNL-----------CPGRHFAVHAIKELVFTILTRFDV 435 (475)
T ss_dssp TSCBCCCCBSSSCBCSCSCCTTCSTTSC-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCCccccccccccccccCccCcCCCCCC-----------CCCHHHHHHHHHHHHHHHHHhEEE
Confidence 3211 1124689999999998 555666666788888888888875
No 101
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.97 E-value=3.1e-31 Score=288.94 Aligned_cols=172 Identities=22% Similarity=0.220 Sum_probs=146.1
Q ss_pred CchhHHHHHHHhhcccCCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHhCCchHHHHHHHHhhhCCCCChhhhcCC
Q psy14413 362 PWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441 (711)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~aG~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l 441 (711)
+.++....++. ....+..++++++..++..+++||+|||+++++|++++|++||++++++++|...+
T Consensus 222 ~~ddl~s~L~~-~~~~~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------ 288 (417)
T 4dxy_A 222 DGDDLITLMVN-SEINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------ 288 (417)
T ss_dssp CCCSHHHHHHT-CEETTEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------
T ss_pred Cccchhhhhcc-ccccCCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------
Confidence 34444443332 33455679999999999999999999999999999999999999999999986632
Q ss_pred hhHHHHHHHHhcCCCCCCcccceecccccccCCEEeCCCCEEEechhhhhcCCCCCCCCCCcccCCCCCCCCCCCcCCCC
Q psy14413 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 521 (711)
Q Consensus 442 pyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~V~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~ 521 (711)
....|.+|++++++ .+.|.+++|++++|+.||+|+.|.++.+++||||++|+||++|+|+|+ +..
T Consensus 289 ----~~avee~~~~~~~~-~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~----------~~~ 353 (417)
T 4dxy_A 289 ----MRGAEEMFRRFPVV-SEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR----------SIS 353 (417)
T ss_dssp ----HHTHHHHHHHSCCB-EEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCC
T ss_pred ----ccceeeeecccccc-ccccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC----------CCC
Confidence 22234444455555 688999999999999999999999999999999999999999999994 235
Q ss_pred ccccCCCCCCCccHHHHHHHHHHHHHHHHHHc-eeeCCCCC
Q psy14413 522 LIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDE 561 (711)
Q Consensus 522 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f-~~~~~~~~ 561 (711)
++|||.|+|.|+|++||++|++++++.|+++| +++++++.
T Consensus 354 ~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~ 394 (417)
T 4dxy_A 354 HSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGE 394 (417)
T ss_dssp CCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTC
T ss_pred CCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCC
Confidence 79999999999999999999999999999999 99987654
No 102
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.97 E-value=5.4e-31 Score=286.92 Aligned_cols=182 Identities=17% Similarity=0.222 Sum_probs=155.5
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
+++..++++++++.. ..|+++.+++.. .++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 193 ~~~~~~~i~~r~~~~--~~d~l~~ll~~~----~~~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l 266 (404)
T 1jfb_A 193 LDYLAILVEQRLVEP--KDDIISKLCTEQ----VKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQL 266 (404)
T ss_dssp HHHHHHHHHHHHHSC--CSSHHHHHHHHT----TTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCcHHHHHHHhh----ccCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHH
Confidence 345667777776654 358999988642 12346899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
+++ .+|+++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 267 ~~~---------------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 331 (404)
T 1jfb_A 267 KAN---------------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDE 331 (404)
T ss_dssp HHC---------------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HhC---------------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhh
Confidence 983 36999999999999999996689999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+||||++. ..++|||.|+|. |+ |+.+|..++++.++.++.+|
T Consensus 332 F~PeRf~~~--------~~~~~Fg~G~r~--C~---------G~~lA~~e~~~~l~~ll~~f 374 (404)
T 1jfb_A 332 FNMNRKWPP--------QDPLGFGFGDHR--CI---------AEHLAKAELTTVFSTLYQKF 374 (404)
T ss_dssp CCTTCCCCS--------SCCCTTCCGGGS--CT---------THHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCCCC--------CCCCCCCCCCcc--CC---------CHHHHHHHHHHHHHHHHHHC
Confidence 999999752 258999999988 44 45555556777777777776
No 103
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.97 E-value=1.4e-31 Score=294.64 Aligned_cols=189 Identities=19% Similarity=0.286 Sum_probs=158.0
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++... ++..+++++++++++.+++||+|||+++++|++++|++||++|+++
T Consensus 222 ~~~~~~~i~~rr~~~~--~Dll~~Ll~~~~----~~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l 295 (441)
T 3nc3_A 222 SQYLMPVIKERRVNPG--SDLISILCTSEY----EGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV 295 (441)
T ss_dssp HHHHHHHHHHHTTSCC--SSHHHHHCC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHHhhc----cCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3456677777766443 489998886422 3346999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+ +|+++||+|+||++|+++. ++|.+++|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 296 ~~E~---------------~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~ 359 (441)
T 3nc3_A 296 LADR---------------SLVPRAIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDV 359 (441)
T ss_dssp HHCG---------------GGHHHHHHHHHHHSCSBCE-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTS
T ss_pred HhCH---------------HHHHHHHHHhhhcCCcccC-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCccc
Confidence 9986 4999999999999999997 89999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+|+||+.........+..++|||.|+|. |+| +.+|..+++++++.++.+|
T Consensus 360 F~PeR~~~~~~~~~~~~~~~l~FG~G~r~--C~G---------~~lA~~e~~~~l~~ll~~f 410 (441)
T 3nc3_A 360 FNIHREDLGIKSAFSGAARHLAFGSGIHN--CVG---------TAFAKNEIEIVANIVLDKM 410 (441)
T ss_dssp CCTTCTTSCGGGTTSSSCSSCTTCCGGGC--CTT---------HHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCcccccccCCCCCcccCCCCCcc--CCC---------HHHHHHHHHHHHHHHHHhC
Confidence 99999976543333335789999999998 444 5555556777777777776
No 104
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.97 E-value=7.6e-32 Score=301.97 Aligned_cols=193 Identities=16% Similarity=0.237 Sum_probs=161.7
Q ss_pred cCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCC-----
Q psy14413 17 TDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNK----- 91 (711)
Q Consensus 17 ~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~----- 91 (711)
.+...|+++.+++...+. ..++++++. .++.+++||++||+++++|++++|++||++|+++++|++++.+
T Consensus 239 ~~~~~d~l~~ll~~~~~~----~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~ 313 (498)
T 3b6h_A 239 RAHRSKWLESYLLHLEEM----GVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQP 313 (498)
T ss_dssp CBSCCHHHHHHHHHHHHT----TCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----
T ss_pred cccHHHHHHHHHHHHHhC----CCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCC
Confidence 334569999998765432 136777777 8888899999999999999999999999999999999998722
Q ss_pred -----CCCccccCCCchhHHHhhhccccccCCccccceecccccee-----cCeeeCCCCEEEechhh-hccCCCCCCCC
Q psy14413 92 -----EPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRL-----GSYVIPQDSIILVNLWS-IMRDQEHWGDP 160 (711)
Q Consensus 92 -----~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l-----~g~~ip~Gt~v~~~~~~-~~~d~~~~~~p 160 (711)
..+.+++.+|||++|||+|++|++|+ + .++|.+.+|+++ +||.|||||.|.++.++ +|+||++|+||
T Consensus 314 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~-~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p 391 (498)
T 3b6h_A 314 VSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-P-FITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDP 391 (498)
T ss_dssp ------CCTHHHHSCHHHHHHHHHHHHHHBC-B-CEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSST
T ss_pred CCcccccCHHHHhcCHHHHHHHHHHHhccCC-C-cceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCCh
Confidence 14778889999999999999999975 5 488999999988 68999999999999999 99999999999
Q ss_pred CCCCCCCCCCCCCCCC--------cCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHH
Q psy14413 161 DVFRPERFIHPTSGEV--------LYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFL 227 (711)
Q Consensus 161 ~~F~P~Rfl~~~~~~~--------~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 227 (711)
++|+||||++.+.... ..+..|+|||+|+|. |+|+.||..++++++|.++.+|++.
T Consensus 392 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~-----------C~G~~~A~~e~~~~la~ll~~f~~~ 455 (498)
T 3b6h_A 392 EVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNH-----------CLGRSYAVNSIKQFVFLVLVHLDLE 455 (498)
T ss_dssp TSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEE-----------CSSHHHHHHHHHHHHHHHHHTEEEE
T ss_pred hhcCcccccCCCcccccccccccccCCcceeccCCCCCC-----------CCcHHHHHHHHHHHHHHHHHHceeE
Confidence 9999999996432110 125689999999987 6666777777889999999888763
No 105
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.97 E-value=3.3e-31 Score=287.81 Aligned_cols=182 Identities=18% Similarity=0.169 Sum_probs=157.3
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++.. ..|+++.+++. ..++..+++++++++++.+++||+|||+++++|++++|++||++|+++
T Consensus 187 ~~~~~~~i~~r~~~~--~~d~l~~ll~~----~~~~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l 260 (396)
T 3oft_A 187 DDYLWPFIEKRMAQP--GDDLFSRILSE----PVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLL 260 (396)
T ss_dssp HHHHHHHHHHHHHSC--CSSHHHHHHTS----CBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCCHHHHHHHh----hccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 356677788777763 35899998864 223446999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++ |+++||+|+||++|++ .++|.+.+|++++|+.||||+.|+++.+++||||++|+||++
T Consensus 261 ~~E~~---------------~l~a~i~E~lRl~p~~--~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~ 323 (396)
T 3oft_A 261 RERPD---------------LIPAAADELMRRYPTV--AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEE 323 (396)
T ss_dssp HHCGG---------------GHHHHHHHHHHHCCCB--EEEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTS
T ss_pred HhCHH---------------hHHHHHHHHHHhcCcc--cCceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCc
Confidence 99976 8999999999999998 589999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH-HH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA-QF 226 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 226 (711)
|+|+||++ +..++|||.|+|. |+|+.+|..++++.++.++.+| ++
T Consensus 324 F~PeR~~~--------~~~~~~FG~G~r~-----------C~G~~lA~~e~~~~l~~ll~~~~~~ 369 (396)
T 3oft_A 324 VRFDRGLA--------PIRHTTMGVGAHR-----------CVGAGLARMEVIVFLREWLGGMPEF 369 (396)
T ss_dssp CCSCCCCC--------GGGSSTTCCGGGC-----------CTTHHHHHHHHHHHHHHHHHHSCCE
T ss_pred cCCCCCCC--------CCCcccCCCCCcc-----------CcCHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999974 3579999999988 4555555566777777777776 43
No 106
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.97 E-value=3.1e-31 Score=290.47 Aligned_cols=180 Identities=26% Similarity=0.286 Sum_probs=151.7
Q ss_pred hhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHH
Q psy14413 5 DKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQE 84 (711)
Q Consensus 5 ~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~ 84 (711)
+..+++++++++. ..|+++.+++...+ +..++++++++++..+++||+|||+++++|++++|++||++|+++++
T Consensus 209 ~~~~~i~~r~~~~--~~dll~~ll~~~~~----~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~ 282 (425)
T 2z3t_A 209 YFRREVDRRGGDD--RDDLLTLLVRARDT----GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRT 282 (425)
T ss_dssp HHHHHHCC---------CHHHHHHHHHHT----TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHhCC--CCCHHHHHHHhhcc----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHh
Confidence 4445555555433 45899999876422 34689999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCC
Q psy14413 85 EIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFR 164 (711)
Q Consensus 85 Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~ 164 (711)
|++ |+++||+|+||++|+++ .++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+
T Consensus 283 E~~---------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~ 346 (425)
T 2z3t_A 283 TPE---------------STPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346 (425)
T ss_dssp CGG---------------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCC
T ss_pred ChH---------------hHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCC
Confidence 974 89999999999999999 69999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH-HHH
Q psy14413 165 PERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA-QFL 227 (711)
Q Consensus 165 P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 227 (711)
||||. ..++|||.|+|. |+|+.+|..++++.++.++.+| ++.
T Consensus 347 PeR~~----------~~~l~FG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~~~~ 389 (425)
T 2z3t_A 347 VHRAA----------ERQVGFGLGIHY-----------CLGATLARAEAEIGLRALLDGIPALG 389 (425)
T ss_dssp TTSCS----------SCCCTTCCSTTC-----------CTTHHHHHHHHHHHHHHHHHHCGGGG
T ss_pred CCCCC----------CCCCCCCCCCcc-----------CCCHHHHHHHHHHHHHHHHHhCCcCc
Confidence 99995 258999999998 4555555566788888888887 553
No 107
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.97 E-value=4.2e-31 Score=287.77 Aligned_cols=178 Identities=20% Similarity=0.247 Sum_probs=155.1
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++.. +..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 200 ~~~~~~~i~~r~~~~~--~d~l~~ll~~~------~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l 271 (406)
T 1ued_A 200 NRYLDNLLARQRADPD--DGLLGMIVRDH------GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELL 271 (406)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHHH------GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHHhc------CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHH
Confidence 3456677777776543 58999998753 234899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+. |+++||+|+||++|+++..++|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus 272 ~~e~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~ 336 (406)
T 1ued_A 272 FESPE---------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDV 336 (406)
T ss_dssp HHCHH---------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HhCHH---------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhh
Confidence 99875 799999999999999997789999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+||||- ..++|||.|+|. | +|+.+|..+++++++.++.+|
T Consensus 337 F~PeR~~----------~~~~pFG~G~r~--C---------~G~~lA~~e~~~~la~ll~~f 377 (406)
T 1ued_A 337 LDANRAA----------VSDVGFGHGIHY--C---------VGAALARSMLRMAYQTLWRRF 377 (406)
T ss_dssp CCTTSCC----------CCCCTTCCSTTS--C---------TTHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCC----------CCCCCCCCCCcC--C---------CcHHHHHHHHHHHHHHHHHhC
Confidence 9999982 368999999998 4 455555566777778777776
No 108
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.97 E-value=1e-30 Score=285.08 Aligned_cols=181 Identities=17% Similarity=0.283 Sum_probs=155.6
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++.. .+++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 188 ~~~~~~~i~~r~~~~~--~d~l~~ll~~~---~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l 262 (411)
T 3a4g_A 188 HGYLSDLLERKRTEPD--DALLSSLLAVS---DEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLL 262 (411)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHCC---CTTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHHhh---ccCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence 3456677777776543 48999888631 113346999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+. |+++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 263 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 327 (411)
T 3a4g_A 263 AEDPS---------------LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDR 327 (411)
T ss_dssp HHCGG---------------GHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTS
T ss_pred hcCHH---------------HHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccc
Confidence 99964 899999999999999996689999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+||||. ..++|||.|+|. | +|+.+|..++++.++.++.+|
T Consensus 328 F~PeR~~----------~~~l~FG~G~r~--C---------~G~~lA~~e~~~~la~ll~~f 368 (411)
T 3a4g_A 328 LDITRDA----------SGGVFFGHGIHF--C---------LGAQLARLEGRVAIGRLFADR 368 (411)
T ss_dssp CCTTSCC----------TTCCTTCCSTTC--C---------TTHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCC----------CCCCCCCCCCcc--C---------CCHHHHHHHHHHHHHHHHHhC
Confidence 9999983 258999999998 4 455555566777788787776
No 109
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.97 E-value=8.9e-31 Score=284.93 Aligned_cols=180 Identities=17% Similarity=0.229 Sum_probs=154.9
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++. ..++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 190 ~~~~~~~i~~r~~~~~--~dll~~ll~~----~~~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l 263 (403)
T 3aba_A 190 GGLLYQLVQERRANPG--DDLISALITT----EDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALL 263 (403)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHTS----CCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHhh----ccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3456677777776543 4888888853 123446999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+. |+++||+|+||++|+++..++|.+.+|++++|+.||||+.|+++.+++||||++|+||++
T Consensus 264 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~ 328 (403)
T 3aba_A 264 REDPS---------------LVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPER 328 (403)
T ss_dssp HHCGG---------------GHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HhCHH---------------HHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccc
Confidence 99964 899999999999999996689999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+||||. ..++|||.|+|. |+ |+.+|..++++.++.++.+|
T Consensus 329 F~PeR~~----------~~~l~FG~G~r~--C~---------G~~lA~~e~~~~la~ll~~f 369 (403)
T 3aba_A 329 FDITRRP----------APHLAFGFGAHQ--CI---------GQQLARIELQIVFETLFRRL 369 (403)
T ss_dssp CCTTSCC----------CCCSTTCCGGGS--CT---------THHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCCC----------CCccCCCCCCcc--Cc---------CHHHHHHHHHHHHHHHHHhC
Confidence 9999983 258999999988 44 45555556777777777776
No 110
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.97 E-value=9.2e-31 Score=285.60 Aligned_cols=181 Identities=21% Similarity=0.264 Sum_probs=155.6
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++...+ +..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 198 ~~~~~~~i~~r~~~~~--~dll~~ll~~~~~----~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l 271 (413)
T 2z36_A 198 RAYIDDLITRKESEPG--DDLFSRQIARQRQ----EGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVV 271 (413)
T ss_dssp HHHHHHHHHHHHSSCC--SSHHHHHHHHHHH----HSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHHhhcC----CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3456677777766543 4899999875321 235899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++ |+++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 272 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 336 (413)
T 2z36_A 272 KANPG---------------RTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAV 336 (413)
T ss_dssp HHCGG---------------GHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HhChH---------------HHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccc
Confidence 99964 799999999999999996699999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
|+||||. ..++|||.|+|. |+|+.+|..++++.++.++.+|+
T Consensus 337 F~PeR~~----------~~~l~FG~G~r~-----------C~G~~lA~~e~~~~la~ll~~f~ 378 (413)
T 2z36_A 337 LDVERGA----------RHHLAFGFGPHQ-----------CLGQNLARMELQIVFDTLFRRIP 378 (413)
T ss_dssp CCTTCCC----------CCCCTTCCSTTS-----------CTTHHHHHHHHHHHHHHHHHHST
T ss_pred cCCCCCC----------CCCCCCCCCCcc-----------CccHHHHHHHHHHHHHHHHHhCC
Confidence 9999984 257999999988 45555555667777787777763
No 111
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.97 E-value=5.6e-31 Score=286.14 Aligned_cols=180 Identities=17% Similarity=0.211 Sum_probs=155.7
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..+++++++++. ..|+++.+++.. .++..+++++++.++..+++||+|||+++++|++++|++||++|+++
T Consensus 185 ~~~~~~~i~~r~~~~--~~d~l~~ll~~~----~~~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l 258 (398)
T 4fb2_A 185 VAHARTLIAERRTNP--GNDIMSRVIMSK----IDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRL 258 (398)
T ss_dssp HHHHHHHHHHHHHSC--CSSHHHHHHHCC----BTTBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCCHHHHHHHcc----cCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 345667777777654 358999988642 23345999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++ ++++||+|+||++|+++ ++|.+.+|++++|+.||||+.|+++.+++||||++|+||++
T Consensus 259 ~~E~~---------------~l~a~i~E~lRl~p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~ 321 (398)
T 4fb2_A 259 IAHPE---------------LIPNAVDELLRFYGPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDN 321 (398)
T ss_dssp HHCGG---------------GHHHHHHHHHHHHCCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HhCHH---------------HHHHHHHHHHHhCCCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCe
Confidence 99976 78999999999999998 89999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH-HH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA-QF 226 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 226 (711)
|+||||. ..++|||.|+|. |+|+.+|..++++.++.++.+| ++
T Consensus 322 F~PeR~~----------~~~~~FG~G~r~-----------C~G~~lA~~e~~~~l~~ll~~f~~~ 365 (398)
T 4fb2_A 322 IVIERTP----------NRHLSLGHGIHR-----------CLGAHLIRVEARVAITEFLKRIPEF 365 (398)
T ss_dssp CCTTCCS----------CCCCTTCCSTTC-----------CTTHHHHHHHHHHHHHHHHHHCCSC
T ss_pred eCCCCCC----------CCCCCCCCCCcC-----------CCCHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999983 368999999998 4555555566778888887776 54
No 112
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.97 E-value=1.3e-30 Score=284.51 Aligned_cols=181 Identities=20% Similarity=0.236 Sum_probs=155.4
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..+++++++++. ..|+++.+++.. .++..++++++.+++..+++||+|||+++++|++++|++||++|++++
T Consensus 195 ~~~~~~i~~r~~~~--~~d~l~~ll~~~----~~~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~ 268 (411)
T 2jjn_A 195 AYLKARCAERRADP--GDDLISRLVLAE----VDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAA 268 (411)
T ss_dssp HHHHHHHHHHHHSC--CSSHHHHHHHCC----BTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCCHHHHHHhcc----cCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 45566677776643 358999888641 133469999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|++ |+++||+|+||++|+++. ++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|
T Consensus 269 ~E~~---------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F 332 (411)
T 2jjn_A 269 EDPG---------------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRF 332 (411)
T ss_dssp HCGG---------------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSC
T ss_pred hCHH---------------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCcccc
Confidence 9975 899999999999999995 899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
+||||.+ ...++|||.|+|. |+ |+.+|..++++.++.++.+|+
T Consensus 333 ~PeR~~~--------~~~~~pFG~G~r~--C~---------G~~lA~~e~~~~la~ll~~f~ 375 (411)
T 2jjn_A 333 DPSRKSG--------GAAQLSFGHGVHF--CL---------GAPLARLENRVALEEIIARFG 375 (411)
T ss_dssp CTTCCCS--------SCCCGGGCSSTTC--CT---------THHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCC--------CCCccCCCCCCcc--Cc---------CHHHHHHHHHHHHHHHHHhCC
Confidence 9999853 1368999999998 44 455555667788888888874
No 113
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.97 E-value=1.2e-30 Score=284.92 Aligned_cols=180 Identities=21% Similarity=0.286 Sum_probs=154.7
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++.. +++..++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus 207 ~~~~~~~i~~r~~~~~--~dll~~ll~~~----~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l 280 (417)
T 2y5n_A 207 YAYMGDLIDRRRKEPT--DDLVSALVQAR----DQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQL 280 (417)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHCC----BTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHhhh----ccCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3456677777776543 48999888641 23346999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCc-cccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAP-IGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~-~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~ 161 (711)
++|+. |+++||+|+||++|+++ ..++|.+.+|++++|+.||||+.|.++.+++||||++|+||+
T Consensus 281 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 345 (417)
T 2y5n_A 281 LDRPE---------------LIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD 345 (417)
T ss_dssp HHCGG---------------GHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTT
T ss_pred HhCHH---------------HHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCcc
Confidence 99864 79999999999999999 568999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+||||. ..++|||.|+|. |+| +.+|..+++++++.++.+|
T Consensus 346 ~F~PeR~~----------~~~lpFG~G~r~--C~G---------~~lA~~e~~~~la~ll~~f 387 (417)
T 2y5n_A 346 RIDVDRTP----------NQHLGFGHGVHH--CLG---------APLARVELQVALEVLLQRL 387 (417)
T ss_dssp SCCTTCSS----------CCCCTTCCSTTS--CTT---------HHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCC----------CCcCCCCCCCcC--CcC---------HHHHHHHHHHHHHHHHHhC
Confidence 99999983 258999999998 444 5555556777777777776
No 114
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.97 E-value=7.6e-31 Score=286.85 Aligned_cols=182 Identities=21% Similarity=0.265 Sum_probs=157.8
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..+++++++++.. .|+++.+++... ++..++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus 202 ~~~~~~~i~~r~~~~~--~d~l~~ll~~~~----~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l 275 (417)
T 3tyw_A 202 FGLLGGLVAERREEPR--DDLISKLVTDHL----VPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAEL 275 (417)
T ss_dssp HHHHHHHHHHHHSSCC--SSHHHHHHHHTT----TTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHH
T ss_pred HHHHHHHHHHHhhCCC--CCHHHHHHHhcc----cCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 3456677777776543 599999987532 2235999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++ |+++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 276 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 340 (417)
T 3tyw_A 276 RKDPD---------------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPER 340 (417)
T ss_dssp HHCGG---------------GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HhChH---------------HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccc
Confidence 99975 799999999999999997679999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH-HH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA-QF 226 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 226 (711)
|+|+||. ..++|||.|+|. |+|+.+|..+++++++.++.+| ++
T Consensus 341 F~PeR~~----------~~~l~FG~G~r~-----------C~G~~lA~~e~~~~l~~ll~~fp~~ 384 (417)
T 3tyw_A 341 VDFHRTD----------NHHVAFGYGVHQ-----------CVGQHLARLELEVALETLLRRVPTL 384 (417)
T ss_dssp CCTTCSC----------CCCCTTCCSTTC-----------CSCHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCCCC----------CCCCCCCCCCcc-----------CcCHHHHHHHHHHHHHHHHHhCCcc
Confidence 9999993 368999999998 4555555566778888888877 54
No 115
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.97 E-value=8.7e-31 Score=287.40 Aligned_cols=179 Identities=18% Similarity=0.197 Sum_probs=152.8
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..+++++++++. ..|+++.+++. ..++..++++++.+++..+++||+|||+++++|++++|++||++|++++
T Consensus 221 ~~~~~~i~~r~~~~--~~dll~~ll~~----~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~ 294 (428)
T 1cpt_A 221 DYFNGFTVDRRSCP--KDDVMSLLANS----KLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAK 294 (428)
T ss_dssp HHHHHHHHHHTTSC--CSSHHHHHHHC----BSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHcCC--CCcHHHHHHhc----cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 44566677766643 35899988864 1233459999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|++ |+++||+|+||++|+++. ++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|
T Consensus 295 ~E~~---------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F 358 (428)
T 1cpt_A 295 SDPA---------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEF 358 (428)
T ss_dssp HCGG---------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSC
T ss_pred HhHH---------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhc
Confidence 9975 899999999999999984 899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
+||||.+ .++|||.|+|. |+|..+ |..++++.++.++.+|+
T Consensus 359 ~PeR~~~----------~~l~FG~G~r~--C~G~~l---------A~~e~~~~l~~ll~~f~ 399 (428)
T 1cpt_A 359 DITRFPN----------RHLGFGWGAHM--CLGQHL---------AKLEMKIFFEELLPKLK 399 (428)
T ss_dssp CTTCCSC----------CCCTTCCSTTC--CTTHHH---------HHHHHHHHHHHHGGGEE
T ss_pred CCCCCCC----------CCCCCCCCCCC--CCcHHH---------HHHHHHHHHHHHHHhCC
Confidence 9999952 38999999998 555555 44556777777777664
No 116
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.1e-30 Score=283.77 Aligned_cols=178 Identities=19% Similarity=0.232 Sum_probs=154.1
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..+++++++++. ..|+++.+++.. .++..++++++++++..+++||+|||+++++|++++|++||++|++++
T Consensus 184 ~~~~~~i~~r~~~~--~~dll~~ll~~~----~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~ 257 (398)
T 2xkr_A 184 DFTRATIAARRADP--TDDLVSVLVSSE----VDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQ 257 (398)
T ss_dssp HHHHHHHHHHHHSC--CSSHHHHHHHCC----BTTBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCCHHHHHHHhh----ccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 45566777776643 358999888641 233469999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|++ |+++||+|++|++|+++. ++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|
T Consensus 258 ~E~~---------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F 321 (398)
T 2xkr_A 258 RDPS---------------LLPGAIEEMLRWTAPVKN-MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKF 321 (398)
T ss_dssp HCGG---------------GHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSC
T ss_pred hCHH---------------HHHHHHHHHHhhcccccC-cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCee
Confidence 9975 899999999999999996 899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+||||.+ .++|||.|+|. |+ |+.+|..++++.++.++.+|
T Consensus 322 ~PeR~~~----------~~l~FG~G~r~--C~---------G~~lA~~e~~~~l~~ll~~f 361 (398)
T 2xkr_A 322 DVQRNPN----------SHLAFGFGTHF--CL---------GNQLARLELSLMTERVLRRL 361 (398)
T ss_dssp CTTCSSC----------CCCTTCCSTTC--CT---------THHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCC----------CCCcCCCCCcC--Cc---------CHHHHHHHHHHHHHHHHHhC
Confidence 9999852 48999999998 44 45555556777778887776
No 117
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.97 E-value=1.2e-30 Score=284.84 Aligned_cols=180 Identities=18% Similarity=0.223 Sum_probs=155.5
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++.. .++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 197 ~~~~~~~i~~r~~~~~--~d~l~~ll~~~----~~~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l 270 (412)
T 2zbx_A 197 AGYLDGLITQFQTEPG--AGLVGALVADQ----LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAAL 270 (412)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHTT----TTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHHhc----ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3456677777776543 58999988642 12346999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+. |+++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 271 ~~e~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 335 (412)
T 2zbx_A 271 RADRS---------------LVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDA 335 (412)
T ss_dssp HHCGG---------------GHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HhChH---------------hHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccc
Confidence 99864 799999999999999997689999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+||||- ..++|||.|+|. | +|+.+|..+++++++.++.+|
T Consensus 336 F~PeR~~----------~~~l~FG~G~r~--C---------~G~~lA~~e~~~~l~~ll~~f 376 (412)
T 2zbx_A 336 LDIHRSA----------RHHLAFGFGVHQ--C---------LGQNLARLELEVILNALMDRV 376 (412)
T ss_dssp CCTTSCC----------TTCCTTCCSTTS--C---------TTHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCC----------CCccCCCCCCCc--C---------ccHHHHHHHHHHHHHHHHHhc
Confidence 9999972 368999999988 4 455555566777788887776
No 118
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.97 E-value=1.5e-30 Score=283.31 Aligned_cols=178 Identities=19% Similarity=0.253 Sum_probs=152.0
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++.. ..|+++.+++...+ ..++++++.+++..+++|| |||+++++|++++|++||++|+++
T Consensus 196 ~~~~~~~i~~r~~~~--~~d~l~~ll~~~~~-----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l 267 (406)
T 1s1f_A 196 NAYFSDLIGLRSDSA--GEDVTSLLGAAVGR-----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERL 267 (406)
T ss_dssp HHHHHHHHHTSCCSC--CCSHHHHHHHHHHT-----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCCHHHHHHHhhcc-----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHH
Confidence 345566777766543 35999999976321 4689999999999999999 999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCc-cccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAP-IGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~-~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~ 161 (711)
++|++ |+++||+|+||++|+++ ..++|.+.+|++++|+.||||+.|+++.+++||||++|+||+
T Consensus 268 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 332 (406)
T 1s1f_A 268 RSEPE---------------IRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD 332 (406)
T ss_dssp HHCGG---------------GHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTT
T ss_pred HhCHH---------------HHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcc
Confidence 99975 79999999999999999 568999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+||||.. .++|||.|+|. |+| +.+|..++++.++.++.+|
T Consensus 333 ~F~PeR~~~----------~~~~FG~G~r~--C~G---------~~lA~~e~~~~l~~ll~~f 374 (406)
T 1s1f_A 333 RIDFERSPN----------PHVSFGFGPHY--CPG---------GMLARLESELLVDAVLDRV 374 (406)
T ss_dssp SCCTTC--C----------CCCTTCCSTTC--CTT---------HHHHHHHHHHHHHHHHHHS
T ss_pred eeCCCCCCC----------CCCCCCCCCCC--CcC---------HHHHHHHHHHHHHHHHHhC
Confidence 999999952 57999999998 455 4555556777777777776
No 119
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.97 E-value=1e-30 Score=284.01 Aligned_cols=176 Identities=17% Similarity=0.232 Sum_probs=151.0
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..++++++++.. ..|+++.+++... ++. ++++++.+++..+++||+|||+++++|++++|++||++|++++
T Consensus 188 ~~~~~~i~~r~~~~--~~dll~~ll~~~~----~~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~ 260 (397)
T 3buj_A 188 DYVERALARRRREG--GEDLLALMLDAHD----RGL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLR 260 (397)
T ss_dssp HHHHHHHHHHHHHC--CCSHHHHHHHHHH----TTS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHHHHHHcCC--CCCHHHHHHHhhh----cCC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHh
Confidence 45566677776654 3489999987531 222 8999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|+. |+++||+|+||++|+++ .++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus 261 ~E~~---------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F 324 (397)
T 3buj_A 261 RRPD---------------LLAQAVEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDF 324 (397)
T ss_dssp HCGG---------------GHHHHHHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSC
T ss_pred hCHH---------------HHHHHHHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCcccc
Confidence 9964 89999999999999999 6999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+||||. ..++|||.|+|. |+|.++| ..++++.++.+ .+|
T Consensus 325 ~PeR~~----------~~~~~FG~G~r~--C~G~~lA---------~~e~~~~l~~l-~~f 363 (397)
T 3buj_A 325 DIERDP----------VPSMSFGAGMRY--CLGSYLA---------RTQLRAAVAAL-ARL 363 (397)
T ss_dssp CTTSCC----------CCCSTTCCGGGC--CTTHHHH---------HHHHHHHHHHH-HTS
T ss_pred CCCCCC----------CCCCCCCCCCcc--CCCHHHH---------HHHHHHHHHHH-hcC
Confidence 999995 257999999998 5555554 45566666666 555
No 120
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.97 E-value=1.4e-30 Score=283.56 Aligned_cols=181 Identities=21% Similarity=0.276 Sum_probs=153.7
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++.. .+++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 193 ~~~~~~~i~~r~~~~~--~dll~~ll~~~---~~~~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l 267 (404)
T 1z8o_A 193 VNFILDLVERRRTEPG--DDLLSALIRVQ---DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALV 267 (404)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHCE---ETTTEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHhhh---cccCCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3456677777766543 48999888531 112335899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+. |+++||+|+||++|+++ .++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 268 ~~E~~---------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~ 331 (404)
T 1z8o_A 268 RRDPS---------------ALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHR 331 (404)
T ss_dssp HHCGG---------------GHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred HhCHH---------------hHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhh
Confidence 99964 79999999999999999 699999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
|+||||. ..++|||.|+|. |+| +.+|..++++.++.++.+|+
T Consensus 332 F~PeR~~----------~~~~~FG~G~r~--C~G---------~~lA~~e~~~~l~~ll~~f~ 373 (404)
T 1z8o_A 332 FDVTRDT----------RGHLSFGQGIHF--CMG---------RPLAKLEGEVALRALFGRFP 373 (404)
T ss_dssp CCTTSCC----------TTCCTTCSSTTC--CTT---------HHHHHHHHHHHHHHHHHHCT
T ss_pred cCCCCCC----------CCccCCCCCCcc--CCc---------HHHHHHHHHHHHHHHHHhCC
Confidence 9999984 258999999998 455 45555567777777777763
No 121
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.97 E-value=6.4e-31 Score=285.60 Aligned_cols=178 Identities=15% Similarity=0.155 Sum_probs=154.9
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++.. +..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 191 ~~~~~~~i~~r~~~~~--~dll~~ll~~~------~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l 262 (398)
T 1lfk_A 191 SRYLLAMIARERKEPG--EGMIGAVVAEY------GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAF 262 (398)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHHH------GGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGG
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHHhc------CCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3456677777776543 58999998753 125899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++ |+++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 263 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 327 (398)
T 1lfk_A 263 RGDEQ---------------SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDR 327 (398)
T ss_dssp SSCHH---------------HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTS
T ss_pred HhCHH---------------HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccc
Confidence 99976 799999999999999996689999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+||||. ..++|||.|+|. |+|+.+|..++++.++.++.+|
T Consensus 328 F~PeR~~----------~~~l~FG~G~r~-----------C~G~~lA~~e~~~~l~~ll~~f 368 (398)
T 1lfk_A 328 LDVTREP----------IPHVAFGHGVHH-----------CLGAALARLELRTVFTELWRRF 368 (398)
T ss_dssp CCTTSCC----------CCCCTTCCSTTS-----------CTTHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCC----------CCCCCCCCCCCc-----------CCCHHHHHHHHHHHHHHHHHhC
Confidence 9999983 258999999998 4455555566777777777776
No 122
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.97 E-value=1.2e-30 Score=284.42 Aligned_cols=183 Identities=17% Similarity=0.179 Sum_probs=153.9
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++...+ ..++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 192 ~~~~~~~i~~r~~~~~--~d~l~~ll~~~~~-~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l 268 (408)
T 1odo_A 192 YEVLDQLIAAKRATPG--DDMTSLLIAARDD-EGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALV 268 (408)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHHHCC------CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC--CCHHHHHHHhccc-ccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3456677777766543 5899999876321 111346999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceec-CeeeCCCCEEEechhhhccCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLG-SYVIPQDSIILVNLWSIMRDQEHWGDPD 161 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~-g~~ip~Gt~v~~~~~~~~~d~~~~~~p~ 161 (711)
++|+ +|+++||+|+||++|+++..++|.+.+|++++ ||.||||+.|+++.+++||||++|+||+
T Consensus 269 ~~e~---------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~ 333 (408)
T 1odo_A 269 RKGE---------------VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDAD 333 (408)
T ss_dssp HHTS---------------SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTT
T ss_pred HhCH---------------HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCcc
Confidence 9984 37999999999999999977899999999999 9999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+|||+ +..++|||.|+|. | +|+.+|..++++.++.++.+|
T Consensus 334 ~F~PeR~----------~~~~~pFG~G~r~--C---------~G~~lA~~e~~~~la~ll~~f 375 (408)
T 1odo_A 334 TFDATRT----------VKEHLAFGHGVHF--C---------LGAPLARMEVTLALESLFGRF 375 (408)
T ss_dssp SCCTTCS----------CCCCCTTCSSTTS--C---------TTHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCC----------CCCCCCCCCCCcc--C---------CCHHHHHHHHHHHHHHHHHhC
Confidence 9999994 2368999999998 4 455555566777777777776
No 123
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.97 E-value=1.7e-30 Score=282.89 Aligned_cols=177 Identities=23% Similarity=0.288 Sum_probs=151.7
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..++++++++.. ..|+++.++ . . .++..++++++++++..+++||+|||+++++|++++|++||++|++++
T Consensus 189 ~~~~~~i~~r~~~~--~~d~l~~ll-~--~--~~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~ 261 (404)
T 3ejb_B 189 AYFKELIQKRKRHP--QQDMISMLL-K--G--REKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLR 261 (404)
T ss_dssp HHHHHHHHHHHHSC--CSSHHHHHH-H--C------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--cchHHHHHH-h--c--ccCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 45566677776544 358999988 3 1 123469999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|++ |++++|+|+||++|+++ .++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus 262 ~E~~---------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F 325 (404)
T 3ejb_B 262 ENPD---------------LIGTAVEECLRYESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF 325 (404)
T ss_dssp HCGG---------------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSC
T ss_pred hCHH---------------HHHHHHHHHHHhCCccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCccee
Confidence 9975 79999999999999999 6899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+||. ..++|||.|+|. | +|+.+|..++++.++.++.+|
T Consensus 326 ~p~R~~----------~~~~~Fg~G~r~--C---------~G~~lA~~e~~~~l~~ll~~f 365 (404)
T 3ejb_B 326 DITRSP----------NPHLSFGHGHHV--C---------LGSSLARLEAQIAINTLLQRM 365 (404)
T ss_dssp CTTCSS----------CCCCTTCCSTTC--C---------TTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCC----------CCCCCCCCcCcc--C---------cCHHHHHHHHHHHHHHHHHhC
Confidence 999982 257999999998 4 455555566777888887776
No 124
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.97 E-value=1.7e-30 Score=285.49 Aligned_cols=181 Identities=20% Similarity=0.296 Sum_probs=155.1
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++...+ ++..++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus 215 ~~~~~~~i~~r~~~~~--~d~l~~ll~~~~~---~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l 289 (436)
T 2cd8_A 215 SGYLSRLIDSKRGQDG--EDLLSALVRTSDE---DGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAAL 289 (436)
T ss_dssp HHHHHHHHHHHTTSCC--CSHHHHHHHHHHH---CTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC--CCHHHHHHHhhhc---cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 3456677777776543 5899999976432 2345899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+. |+++||+|+||++|+++..++|.+.+|++++|+.||||+.|+++.+++||||++|+||++
T Consensus 290 ~~e~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 354 (436)
T 2cd8_A 290 RADMT---------------LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHR 354 (436)
T ss_dssp HHCGG---------------GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTS
T ss_pred hhChh---------------hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccc
Confidence 99864 799999999999999996689999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+||||- ..++|||.|+|. |+|. .+|..++++.++.++.+|
T Consensus 355 F~PeR~~----------~~~~pFG~G~r~--C~G~---------~lA~~e~~~~la~ll~~f 395 (436)
T 2cd8_A 355 FDIRRDT----------AGHLAFGHGIHF--CIGA---------PLARLEARIAVRALLERC 395 (436)
T ss_dssp CCTTSCC----------TTCCTTCCSTTC--CTTH---------HHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCC----------CCCCCCCCCCCC--CcCH---------HHHHHHHHHHHHHHHHhC
Confidence 9999961 368999999998 5554 455555677777777665
No 125
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.97 E-value=2.1e-30 Score=281.37 Aligned_cols=168 Identities=20% Similarity=0.286 Sum_probs=146.6
Q ss_pred hhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCCCCCccccC
Q psy14413 20 FYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRY 99 (711)
Q Consensus 20 ~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 99 (711)
..|+++.+++.... +++..++++++++++..+++||+|||+++++|++++|++||++|+++++|+.
T Consensus 199 ~~dll~~ll~~~~~--~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------ 264 (396)
T 1n40_A 199 TTGLMGELSRLRKD--PAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE------------ 264 (396)
T ss_dssp CSHHHHHHHHHHTS--GGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------
T ss_pred CCCHHHHHHHhhcc--cccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH------------
Confidence 36899999875311 0233589999999999999999999999999999999999999999999964
Q ss_pred CCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCCcCC
Q psy14413 100 KCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYD 179 (711)
Q Consensus 100 ~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~ 179 (711)
|+++||+|++|++|+++..++|.+.+|++++|+.||||+.|+++.+++||||++|+||++|+||||.+
T Consensus 265 ---~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~--------- 332 (396)
T 1n40_A 265 ---LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP--------- 332 (396)
T ss_dssp ---GHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---------
T ss_pred ---HHHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---------
Confidence 89999999999999999669999999999999999999999999999999999999999999999963
Q ss_pred CCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 180 ETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 180 ~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
..++|||.|+|. |+|. .+|..++++.++.++.+|
T Consensus 333 ~~~~~FG~G~r~--C~G~---------~lA~~e~~~~la~ll~~f 366 (396)
T 1n40_A 333 TSHLAFGRGQHF--CPGS---------ALGRRHAQIGIEALLKKM 366 (396)
T ss_dssp TCSSTTCCGGGC--CTTH---------HHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCcC--CCCH---------HHHHHHHHHHHHHHHHhC
Confidence 368999999988 5554 455556777777777766
No 126
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.96 E-value=3.1e-30 Score=282.19 Aligned_cols=179 Identities=21% Similarity=0.335 Sum_probs=153.9
Q ss_pred hhhHHHHHHhhhccCchh-hHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFY-DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
++..+++++++++. .. |+++.+++... ++..++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus 207 ~~~~~~i~~r~~~~--~~~dll~~ll~~~~----~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l 280 (419)
T 1q5d_A 207 ALLHGVLDERRRNP--LENDVLTMLLQAEA----DGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELV 280 (419)
T ss_dssp HHHHHHHHHHHHSC--CSSCHHHHHHHHHH----SSTTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHhCC--CCCCHHHHHHhhhc----cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 45566777776543 34 89999997632 2346899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+. |+++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 281 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 345 (419)
T 1q5d_A 281 KAEPG---------------LMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDV 345 (419)
T ss_dssp HHCGG---------------GHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTS
T ss_pred HhCHH---------------HHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhh
Confidence 99953 899999999999999996699999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+||||- ..++|||.|+|. | +|+.+|..++++.++.++.+|
T Consensus 346 F~PeR~~----------~~~l~FG~G~r~--C---------~G~~lA~~e~~~~la~ll~~f 386 (419)
T 1q5d_A 346 FDVRRDT----------SASLAYGRGPHV--C---------PGVSLARLEAEIAVGTIFRRF 386 (419)
T ss_dssp CCTTSCC----------TTCCTTCCGGGC--C---------TTHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCC----------CCCCCCCCCCCc--C---------ccHHHHHHHHHHHHHHHHHhC
Confidence 9999941 368999999988 4 455555566777788787776
No 127
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.96 E-value=2.5e-30 Score=281.13 Aligned_cols=175 Identities=15% Similarity=0.216 Sum_probs=151.3
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+ + ++ .++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus 199 ~~~~~~~i~~r~~~~~--~dll~~l-----~---~~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l 267 (404)
T 2xbk_A 199 FGYVAGLVEHKRAEPG--PDIISRL-----N---DG-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAA 267 (404)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHH-----H---SS-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHh-----h---cC-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3556677777766543 4888776 1 12 5999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCc-cccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAP-IGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~-~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~ 161 (711)
++|+. |+++||+|+||++|+++ ..++|.+.+|++++||.||||+.|+++.+++||||++|+||+
T Consensus 268 ~~E~~---------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 332 (404)
T 2xbk_A 268 LADPD---------------VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPE 332 (404)
T ss_dssp HHCHH---------------HHHHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTT
T ss_pred HhCHH---------------HHHHHHHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCcc
Confidence 99975 79999999999999999 568999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+||||. ..++|||.|+|. |+ |+.+|..++++.++.++.+|
T Consensus 333 ~F~PeR~~----------~~~lpFG~G~r~--C~---------G~~lA~~e~~~~la~ll~~f 374 (404)
T 2xbk_A 333 EFDAARTP----------NPHLTFGHGIWH--CI---------GAPLARLELRTMFTKLFTRL 374 (404)
T ss_dssp SCCTTCSS----------CCCCTTEETTEE--CT---------THHHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCC----------CCCCCCCCCCcC--CC---------cHHHHHHHHHHHHHHHHHhC
Confidence 99999993 268999999998 44 45555556777777777776
No 128
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.96 E-value=2.5e-30 Score=280.45 Aligned_cols=180 Identities=18% Similarity=0.263 Sum_probs=153.7
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..+++++++++.. +|+++.+++...+ ..++++++.++++.+++||+|||+++++|++++|++||++|++++
T Consensus 188 ~~~~~~i~~rr~~~~--~dll~~Ll~~~~~-----~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~ 260 (394)
T 2wiy_A 188 ARVAEMLEDKRVNPG--DGLADSLLDAARA-----GEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFR 260 (394)
T ss_dssp HHHHHHHHHHHHSCC--SSHHHHHHHHHHT-----TSSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHhhcCCC--CcHHHHHHHhhhc-----CCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHH
Confidence 455667777766543 4899999876422 248999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|+. |++++|+|+||++|+++ .++|.+++|++++|+.||||+.|+++.+++||||++|+||++|
T Consensus 261 ~e~~---------------~l~a~i~E~LRl~pp~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F 324 (394)
T 2wiy_A 261 NDES---------------ARAAIINEMVRMDPPQL-SFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVF 324 (394)
T ss_dssp HCGG---------------GHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSC
T ss_pred hChH---------------hHHHHHHHHHhhCCCcc-CeeEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCcccc
Confidence 9864 79999999999999998 5889999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
+|+||++. ..++|||.|+|. |+|..+|+ .++++.++.++.+|+
T Consensus 325 ~p~R~~~~--------~~~l~FG~G~r~--C~G~~lA~---------~e~~~~l~~ll~~~~ 367 (394)
T 2wiy_A 325 DHTRPPAA--------SRNLSFGLGPHS--CAGQIISR---------AEATTVFAVLAERYE 367 (394)
T ss_dssp CTTCCGGG--------SCCSTTCCGGGS--CTTHHHHH---------HHHHHHHHHHHHHCS
T ss_pred CCCCCCCC--------CCccCCCCCCCc--CCcHHHHH---------HHHHHHHHHHHHhCC
Confidence 99999742 358999999998 55655555 456666666666654
No 129
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.96 E-value=9.3e-31 Score=285.46 Aligned_cols=181 Identities=20% Similarity=0.227 Sum_probs=154.5
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
..+..++++++++... .|+++.+++.. +++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 195 ~~~~~~~i~~r~~~~~--~d~l~~ll~~~----~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l 268 (411)
T 1gwi_A 195 ASIMTDTVAAKRAAPG--DDLTSALIQAS----ENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALV 268 (411)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHCC----BTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHHhc----ccCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHH
Confidence 3456677777766543 58999888642 12346999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCC-CCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW-GDPD 161 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~ 161 (711)
++|+ +|+++||+|+||++|+++..++|.+.+|++++|+.||||+.|+++.+++||||++| +||+
T Consensus 269 ~~e~---------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~ 333 (411)
T 1gwi_A 269 LSGE---------------AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTAD 333 (411)
T ss_dssp HTTS---------------SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGG
T ss_pred HcCh---------------HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChh
Confidence 9874 37999999999999999977899999999999999999999999999999999999 8999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+||||.. ..++|||.|+|. |+|.+ +|..++++.++.++.+|
T Consensus 334 ~F~PeRf~~---------~~~lpFG~G~r~--C~G~~---------lA~~e~~~~l~~ll~~f 376 (411)
T 1gwi_A 334 RFDLTRTSG---------NRHISFGHGPHV--CPGAA---------LSRMEAGVALPALYARF 376 (411)
T ss_dssp SCCTTCCCS---------SCCCTTCCSTTC--CTTHH---------HHHHHHHHHHHHHHHHC
T ss_pred hcCCCCCCC---------CCcccCCCCccc--CCCHH---------HHHHHHHHHHHHHHHhC
Confidence 999999952 368999999998 55554 45555777777777776
No 130
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.96 E-value=9.4e-31 Score=285.64 Aligned_cols=181 Identities=15% Similarity=0.219 Sum_probs=154.6
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++.. ..|+++.+++... .+++..++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus 201 ~~~~~~~i~~r~~~~--~~dll~~ll~~~~--~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l 276 (414)
T 2uuq_A 201 MAYFTGLIERRRTEP--ADDAISHLVAAGV--GADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLL 276 (414)
T ss_dssp HHHHHHHHHHHTTSC--CSSHHHHHHHTTT--TCTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCCHHHHHHhccc--ccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 345667777776653 3589999886421 112345899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCC-CCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHW-GDPD 161 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~ 161 (711)
++|+. |+++||+|+||++|+++ .++|.+.+|++++|+.||||+.|+++.+++||||++| +||+
T Consensus 277 ~~E~~---------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~ 340 (414)
T 2uuq_A 277 LDDPE---------------GIPDAVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAA 340 (414)
T ss_dssp HHCGG---------------GHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTT
T ss_pred HhCHH---------------HHHHHHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCch
Confidence 99964 89999999999999999 6999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+||||.. .++|||.|+|. | +|+.+|..++++.++.++.+|
T Consensus 341 ~F~PeR~~~----------~~~~FG~G~r~--C---------~G~~lA~~e~~~~la~ll~~f 382 (414)
T 2uuq_A 341 ELDVTRCPR----------NILTFSHGAHH--C---------LGAAAARMQCRVALTELLARC 382 (414)
T ss_dssp SCCTTCCCC----------SCCTTCSSTTC--C---------TTHHHHHHHHHHHHHHHHHHC
T ss_pred hcCCCCCCC----------CCcCCCCCCcc--C---------CCHHHHHHHHHHHHHHHHHhC
Confidence 999999852 58999999998 4 455555566777778777776
No 131
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.96 E-value=2.4e-30 Score=283.28 Aligned_cols=180 Identities=20% Similarity=0.221 Sum_probs=155.2
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++.. ..|+++.+++. ..++..+++++++++++.+++||+|||+++++|++++|++||++|+++
T Consensus 209 ~~~~~~~i~~r~~~~--~~dll~~ll~~----~~~~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l 282 (421)
T 3lxh_A 209 FEYVAPIIAARRGGS--GTDLITRILNV----EIDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEM 282 (421)
T ss_dssp HHHHHHHHHHHTTCC--CCSHHHHHHTS----CBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCCHHHHHHhh----hccCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 345667777777663 35899988853 223446999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++ |++++|+|+||++|++ .++|.+.+|++++|+.||||+.|+++.+++||||++|+||++
T Consensus 283 ~~E~~---------------~l~a~i~E~lRl~p~~--~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~ 345 (421)
T 3lxh_A 283 RREPL---------------KLQRGVEELFRRFAVV--SDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMT 345 (421)
T ss_dssp HHCHH---------------HHHHHHHHHHHHCCCB--EEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTS
T ss_pred HhCHH---------------HHHHHHHHHHHhcCcc--CCceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCe
Confidence 99987 8999999999999998 589999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH-HH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA-QF 226 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 226 (711)
|+|||| +..++|||.|+|. | +|+.||..++++.++.++.+| ++
T Consensus 346 F~PeR~----------~~~~l~FG~G~r~--C---------~G~~lA~~e~~~~l~~ll~~fp~~ 389 (421)
T 3lxh_A 346 VDLSRR----------DVTHSTFAQGPHR--C---------AGMHLARLEVTVMLQEWLARIPEF 389 (421)
T ss_dssp CCTTCS----------CCCCCTTCCGGGS--C---------TTHHHHHHHHHHHHHHHHHHCCCC
T ss_pred eCCCCC----------CCCCCCCCCcCcc--C---------cCHHHHHHHHHHHHHHHHHhCCCc
Confidence 999995 3478999999988 4 455555566777778777776 54
No 132
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.96 E-value=1.7e-30 Score=283.32 Aligned_cols=179 Identities=19% Similarity=0.306 Sum_probs=154.9
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++... ++..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 196 ~~~~~~~i~~r~~~~~--~d~l~~ll~~~~----~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l 269 (408)
T 3abb_A 196 YTYLHGLVGRKQAEPE--DGLLDELIARQL----EEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVL 269 (408)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHHHH----TSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGG
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHhccc----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 3556777777776543 589999987643 2345999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+. |+++||+|+||++|+++ .++|.+.+|++++||.|||||.|+++.+++||||++|+||++
T Consensus 270 ~~e~~---------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~ 333 (408)
T 3abb_A 270 LRDPG---------------AVSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDI 333 (408)
T ss_dssp GSCHH---------------HHHHHHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTS
T ss_pred HhCHH---------------hHHHHHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCccc
Confidence 98864 79999999999999999 699999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+|||| +..++|||.|+|. |+ |+.+|..++++.++.++.+|
T Consensus 334 F~PeR~----------~~~~~~FG~G~r~--C~---------G~~lA~~e~~~~l~~ll~~f 374 (408)
T 3abb_A 334 FDARRN----------ARHHVGFGHGIHQ--CL---------GQNLARAELEIALGGLFARI 374 (408)
T ss_dssp CCTTSC----------CTTCCTTCCGGGC--CT---------THHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCC----------CCCCCCCCCCCcC--Cc---------CHHHHHHHHHHHHHHHHHhC
Confidence 999997 2368999999988 44 45555556777777777776
No 133
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.96 E-value=1.8e-30 Score=282.97 Aligned_cols=177 Identities=16% Similarity=0.169 Sum_probs=153.2
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..++++++++... .|+++.+++. .+ +..++++++++++..+++|| |||+++++|++++|++||++|++++
T Consensus 200 ~~~~~~i~~r~~~~~--~dll~~ll~~-~~----~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~ 271 (411)
T 2dkk_A 200 GWITETVRARAGSEG--GDVYSMLGAA-VG----RGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMR 271 (411)
T ss_dssp HHHHHHHHTTTTCCS--SCHHHHHHHH-HH----TTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC--CCHHHHHHHh-cC----CCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 455667777765543 4999999976 22 23589999999999999999 9999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccc-cceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIG-VAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~-~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
+|++ |+++||+|+||++|+++.. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||++
T Consensus 272 ~E~~---------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~ 336 (411)
T 2dkk_A 272 ERPG---------------ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDR 336 (411)
T ss_dssp HCTT---------------CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTS
T ss_pred hCHH---------------HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCC
Confidence 9974 7999999999999999976 88999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+|+||. ..++|||.|+|. |+|. .+|..++++.++.++.+|
T Consensus 337 F~PeR~~----------~~~l~FG~G~r~--C~G~---------~lA~~e~~~~l~~ll~~f 377 (411)
T 2dkk_A 337 IDLDRDP----------NPHLAYGNGHHF--CTGA---------VLARMQTELLVDTLLERL 377 (411)
T ss_dssp CCCSCSS----------CCCCTTCCSTTS--CTTH---------HHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCC----------CCCCCCCCCCCC--CcCH---------HHHHHHHHHHHHHHHHHC
Confidence 9999995 258999999998 5554 445555777777777776
No 134
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.96 E-value=6.3e-30 Score=279.37 Aligned_cols=181 Identities=20% Similarity=0.267 Sum_probs=155.8
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++... .|+++.+++...+. .+++++++++++.+++||+|||+++++|++++|++||++|+++
T Consensus 207 ~~~~~~~i~~rr~~~~--~dll~~ll~~~~~~-----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l 279 (416)
T 3p3o_A 207 FDYLVAAIEKRKVEPG--DDLTSDIVRAFHDG-----VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKI 279 (416)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--ccHHHHHHHhhccC-----CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3556677777776543 49999999764321 6999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++ |++++|+|+||++|+++..++|.+.+|++++|+.||||+.|+++.+++||||++|+||++
T Consensus 280 ~~e~~---------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~ 344 (416)
T 3p3o_A 280 KENPE---------------LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADR 344 (416)
T ss_dssp HHCGG---------------GHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTS
T ss_pred HhCHH---------------HHHHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccc
Confidence 99975 899999999999999977799999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
|+|+||.+ ..++|||.|+|. |+|..+|+ .++++.++.++.+|+
T Consensus 345 F~p~R~~~---------~~~l~FG~G~r~--C~G~~lA~---------~e~~~~l~~ll~~f~ 387 (416)
T 3p3o_A 345 FDITVKRE---------APSIAFGGGPHF--CLGTALAR---------LELTEAVAALATRLD 387 (416)
T ss_dssp CCTTCCCS---------SCCCTTCCSTTS--CTTHHHHH---------HHHHHHHHHHHHHSC
T ss_pred cCCCCCCC---------CCeecCCCCCcc--CcCHHHHH---------HHHHHHHHHHHHhCC
Confidence 99999842 358999999998 55555554 556667777766653
No 135
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.96 E-value=2.1e-30 Score=282.74 Aligned_cols=175 Identities=19% Similarity=0.261 Sum_probs=152.7
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..+++++++++.. .|+++.+++.. .++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus 211 ~~~~~~~i~~rr~~~~--~dll~~ll~~~--------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l 280 (415)
T 3mgx_A 211 LVYFDELITARRKEPG--DDLVSTLVTDD--------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTAL 280 (415)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHCT--------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHhCC--------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3566777888776643 48999988531 5899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|+ ||++++|+|+||++|+++ .++|.+++|++++|+.||||+.|+++.+++||||++|+||++
T Consensus 281 ~~E~---------------~~l~a~i~E~LRl~pp~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~ 344 (415)
T 3mgx_A 281 RDGS---------------ADVDTVVEEVLRWTSPAM-HVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDT 344 (415)
T ss_dssp HHTS---------------SCHHHHHHHHHHHHCCBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTS
T ss_pred HhCh---------------HhHHHHHHHHHHhcCccc-ccceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccc
Confidence 9995 699999999999999998 589999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+|+||. ..++|||.|+|. |+|..+| ..++++.++.++.+|
T Consensus 345 F~P~R~~----------~~~l~FG~G~r~--C~G~~lA---------~~e~~~~l~~ll~~f 385 (415)
T 3mgx_A 345 FLPGRKP----------NRHITFGHGMHH--CLGSALA---------RIELSVVLRVLAERV 385 (415)
T ss_dssp CCTTCCS----------CCCCTTCCGGGC--CTTHHHH---------HHHHHHHHHHHHHHE
T ss_pred cCCCCCC----------CCCCCCCCCCcc--CcCHHHH---------HHHHHHHHHHHHHhC
Confidence 9999983 258999999998 5555554 455677777777665
No 136
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.96 E-value=1.6e-30 Score=290.67 Aligned_cols=194 Identities=20% Similarity=0.226 Sum_probs=163.8
Q ss_pred CchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhC-------
Q psy14413 18 DKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLN------- 90 (711)
Q Consensus 18 ~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~------- 90 (711)
+...|+++.+++...+. +.+++++++.+++.+++||++||+++++|++++|++||++|+++++|++++.
T Consensus 234 ~~~~d~l~~l~~~~~~~----~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~ 309 (491)
T 3v8d_A 234 ESISELISLRMFLNDTL----STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKV 309 (491)
T ss_dssp BSCCHHHHHHHHHHHHH----BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccHHHHHHHHHhhcc----CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcccccc
Confidence 34568898888764332 2489999999999999999999999999999999999999999999999872
Q ss_pred ------CCCCccccCCCchhHHHhhhccccccCCccccceecccccee----cCeeeCCCCEEEechhhhccCCCCCCCC
Q psy14413 91 ------KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRL----GSYVIPQDSIILVNLWSIMRDQEHWGDP 160 (711)
Q Consensus 91 ------~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l----~g~~ip~Gt~v~~~~~~~~~d~~~~~~p 160 (711)
..++.+++.++||+++||+|+||++|+ + .++|.+.+|+++ +|+.||||+.|.++.+++||||++|+||
T Consensus 310 ~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~-~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p 387 (491)
T 3v8d_A 310 SLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-S-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDP 387 (491)
T ss_dssp CSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-E-CEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSST
T ss_pred ccccccccCCHHHHhcChHHHHHHHHHhhcCCC-C-ccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCc
Confidence 234566778999999999999999974 4 478999999999 9999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC--------CcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHHHH
Q psy14413 161 DVFRPERFIHPTSGE--------VLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFLD 228 (711)
Q Consensus 161 ~~F~P~Rfl~~~~~~--------~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 228 (711)
++|+|+||++.+... ...+..|+|||.|+|. |+|+.||..+++++++.++.+|++..
T Consensus 388 ~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~-----------C~G~~lA~~e~~~~l~~ll~~~~~~~ 452 (491)
T 3v8d_A 388 LTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATI-----------CPGRLFAIHEIKQFLILMLSYFELEL 452 (491)
T ss_dssp TSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEE-----------CTTHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred cccCcccccCCCCCcccccccccccCCCcccCCCCCCCC-----------CCCHHHHHHHHHHHHHHHHHHceEEe
Confidence 999999999754321 1235689999999988 55666666778888899998887643
No 137
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.96 E-value=3.9e-30 Score=283.92 Aligned_cols=179 Identities=17% Similarity=0.207 Sum_probs=153.5
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..+++++++++.. .|+++.+++. ..++..+++++++++++.+++||+|||+++++|++++|++||++|++++
T Consensus 243 ~~~~~~i~~r~~~~~--~dll~~ll~~----~~~~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~ 316 (450)
T 3tkt_A 243 RYFAGLAAERRRNPT--DDVATVIANA----VVDGEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVK 316 (450)
T ss_dssp HHHHHHHHHHHHSCC--SSHHHHHHTC----EETTEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC--CCHHHHHHhc----cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 455666777776543 4888888753 1233459999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|+. |++++|+|+||++|+++ .++|.+++|++++|+.||||+.|+++.+++||||++|+||++|
T Consensus 317 ~E~~---------------~l~a~i~E~LRl~pp~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F 380 (450)
T 3tkt_A 317 ADRN---------------LLPGIVEEAIRWTTPVQ-HFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKF 380 (450)
T ss_dssp HCGG---------------GHHHHHHHHHHHHCSBC-EEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSC
T ss_pred HCHH---------------HHHHHHHHHHHhCCCcc-CcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCee
Confidence 9974 89999999999999999 5899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
+|||+. ..++|||.|+|. |+|.. +|..++++.++.++.+|+
T Consensus 381 ~PeR~~----------~~~l~FG~G~r~--C~G~~---------lA~~e~~~~l~~ll~~f~ 421 (450)
T 3tkt_A 381 DPTRPA----------NRHLAFGAGSHQ--CLGLH---------LARLEMRVLLDVLLDRVD 421 (450)
T ss_dssp CTTSCT----------TCSSTTCCSTTC--CTTHH---------HHHHHHHHHHHHHHHHEE
T ss_pred CCCCCC----------CCCCCCCCcCcc--CccHH---------HHHHHHHHHHHHHHHhCC
Confidence 999953 258999999998 55554 455567777787877766
No 138
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.96 E-value=8.1e-30 Score=279.97 Aligned_cols=180 Identities=22% Similarity=0.285 Sum_probs=154.7
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..+++++++++. ..|+++.+++. ..++..+++++++.++..+++||+|||+++++|++++|++||++|++++
T Consensus 228 ~~~~~~i~~r~~~~--~~dll~~ll~~----~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~ 301 (435)
T 2wm5_A 228 AYATALAEDRRVNH--HDDLTSSLVEA----EVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWW 301 (435)
T ss_dssp HHHHHHHHHHHHSC--CSSHHHHHHHC----CBTTBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHhcCC--CCCHHHHHHhh----hccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 45666777776643 35899998864 1123469999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|++ +|+++||+|+||++|+++ .++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus 302 ~E~~--------------~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F 366 (435)
T 2wm5_A 302 SDFD--------------GLAPTAVEEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTF 366 (435)
T ss_dssp HSHH--------------HHHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCC
T ss_pred hChH--------------hHHHHHHHHHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCcc
Confidence 9986 389999999999999999 6999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCC-CcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGL-DPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
+|||+ +..++|||. |+|. |+ |+.+|..++++.++.++.+|+
T Consensus 367 ~PeR~----------~~~~lpFG~~G~r~--C~---------G~~lA~~e~~~~la~ll~~f~ 408 (435)
T 2wm5_A 367 DLARN----------PNPHLGFGGGGAHF--CL---------GANLARREIRVAFDELRRQMP 408 (435)
T ss_dssp CTTCC----------SCCCCTTCSSSTTC--CT---------THHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCC----------CCCCCCCCCCCCCC--CC---------CHHHHHHHHHHHHHHHHHhCC
Confidence 99994 135899999 9998 44 555555567777787777764
No 139
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.96 E-value=3.5e-30 Score=281.08 Aligned_cols=179 Identities=16% Similarity=0.119 Sum_probs=153.1
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
.++..++++++++.. ..|+++.+++.. .++..++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus 202 ~~~~~~~i~~r~~~~--~~dll~~ll~~~----~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l 275 (415)
T 2zwu_A 202 YDYLIPIIEQRRQKP--GTDAISIVANGQ----VNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQEL 275 (415)
T ss_dssp HHHHHHHHHHHHHSC--CSSHHHHHHTCE----ETTEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHhCC--CCCHHHHHHHhh----hcCCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHH
Confidence 345667777777643 358999888531 12345899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++ |+++||+|++|++|+++ .+ |.+.+|++++|+.||||+.|+++.+++||||++|+||++
T Consensus 276 ~~E~~---------------~l~a~i~E~lRl~p~~~-~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~ 338 (415)
T 2zwu_A 276 IERPE---------------RIPAACEELLRRFSLVA-DG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMH 338 (415)
T ss_dssp HHCGG---------------GHHHHHHHHHHHTCCBC-CE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTS
T ss_pred HhCHH---------------HHHHHHHHHHhhcCCcC-Cc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccc
Confidence 99964 89999999999999999 48 999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
|+||||- ..++|||.|+|. |+| +.+|..++++.++.++.+|+
T Consensus 339 F~PeR~~----------~~~l~FG~G~r~--C~G---------~~lA~~e~~~~la~ll~~f~ 380 (415)
T 2zwu_A 339 VDFSRQK----------VSHTTFGHGSHL--CLG---------QHLARREIIVTLKEWLTRIP 380 (415)
T ss_dssp CCTTCSS----------CCCCTTCCGGGC--CSS---------HHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCC----------CCCCCCCCCCcc--CCC---------HHHHHHHHHHHHHHHHHhCC
Confidence 9999962 358999999988 444 55555567777777777765
No 140
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.96 E-value=1.1e-29 Score=277.75 Aligned_cols=178 Identities=21% Similarity=0.295 Sum_probs=153.4
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..++++++++.. ..|+++.+++...+ +..++++++++++..+++||+|||+++++|++++|++||++|++++
T Consensus 210 ~~~~~~i~~r~~~~--~~d~l~~ll~~~~~----~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~ 283 (418)
T 3r9b_A 210 DYLRALIDERRRTP--GEDLMSGLVAVEES----GDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALA 283 (418)
T ss_dssp HHHHHHHHHTTTSC--CSSHHHHHHHHHHH----SSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHhCC--CccHHHHHHHhhhc----cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 45666777776654 45999999976322 2358999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|++ |+++||+|+||++|+++. ..|.+++|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus 284 ~E~~---------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F 347 (418)
T 3r9b_A 284 ADGS---------------RASAVIEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRF 347 (418)
T ss_dssp HCGG---------------GHHHHHHHHHHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSC
T ss_pred hChH---------------hHHHHHHHHHHhCCcccc-ceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcC
Confidence 9975 799999999999999997 679999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+|. ...++|||.|+|. |+ |+.+|..++++.++.++.+|
T Consensus 348 ~p~R~----------~~~~~~FG~G~r~--C~---------G~~lA~~e~~~~l~~ll~~f 387 (418)
T 3r9b_A 348 DPDRA----------QIRHLGFGKGAHF--CL---------GAPLARLEATVALPALAARF 387 (418)
T ss_dssp CTTCS----------CCCCCTTCCGGGC--CT---------THHHHHHHHHHHHHHHHHHC
T ss_pred CCCCC----------CCCCcCCCCcCcc--Cc---------cHHHHHHHHHHHHHHHHHhC
Confidence 99993 2368999999998 44 45555556777777777776
No 141
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.96 E-value=6.2e-30 Score=279.73 Aligned_cols=190 Identities=16% Similarity=0.180 Sum_probs=155.1
Q ss_pred hhhhHHHHHHhhhcc--CchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHH
Q psy14413 3 RADKTEIVSDHKKNT--DKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR 80 (711)
Q Consensus 3 r~~~~~~~~~~~~~~--~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~ 80 (711)
.++..++++++++.. ....|+++.+++. ...++..++++++...+..+ +||++||+++++|++++|++||++|+
T Consensus 191 ~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~---~~~~g~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~ 266 (417)
T 1izo_A 191 EEWIEVMIEDARAGLLKTTSGTALHEMAFH---TQEDGSQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKE 266 (417)
T ss_dssp HHHHHHHHHHHHTTSSCCCTTSHHHHHHHC---BCTTSCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHH
T ss_pred HHHHHHHHHHHHhhccCCCcCCHHHHHHHh---ccccCCCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHH
Confidence 345667777777643 2346889888753 12233458888877766655 48999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCC
Q psy14413 81 KIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160 (711)
Q Consensus 81 ~l~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p 160 (711)
++++| ++||+++||+|+||++|+++. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||
T Consensus 267 ~l~~E--------------~~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp 331 (417)
T 1izo_A 267 WLRSG--------------NSREREMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHP 331 (417)
T ss_dssp HHHTC--------------CHHHHHHHHHHHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSST
T ss_pred HHHhc--------------CCHHHHHHHHHHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCc
Confidence 99987 468999999999999999996 899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcCCCCccccCCCc----ccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 161 DVFRPERFIHPTSGEVLYDETLIPFGLDP----GYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 161 ~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
++|+|+||++.+ ..+..++|||.|+ |. |+|+.+|..+++++++.++.+|++
T Consensus 332 ~~F~P~R~~~~~----~~~~~~~~FG~G~r~~~r~-----------C~G~~lA~~e~~~~l~~ll~~~~~ 386 (417)
T 1izo_A 332 DEFRPERFAERE----ENLFDMIPQGGGHAEKGHR-----------CPGEGITIEVMKASLDFLVHQIEY 386 (417)
T ss_dssp TSCCGGGGTTCC----CCSSSCCTTCSSCTTSSSC-----------CTTHHHHHHHHHHHHHHHHHTEEE
T ss_pred cccChhhcCCCC----CCCcceeCCCCCCCCCCCc-----------CCCHHHHHHHHHHHHHHHHHhCeE
Confidence 999999999642 1356899999994 77 455555556677788888777654
No 142
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.96 E-value=9e-30 Score=278.84 Aligned_cols=179 Identities=22% Similarity=0.249 Sum_probs=151.6
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
.+..++++++++ .+...|+++.+++... +.++++++++++++.+++||+|||+++++|++++|++||++|++++
T Consensus 219 ~~~~~~i~~r~~-~~~~~dll~~ll~~~~-----~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr 292 (426)
T 3rwl_A 219 AYFQVLWNERVN-KDPGNDLISMLAHSPA-----TRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLK 292 (426)
T ss_dssp HHHHHHHHHHHT-SCCCSSHHHHHHHCGG-----GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHhh-cCCCCCHHHHHHhccc-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 455666666622 2234699999986421 1248999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|+. |++++|+|+||++|+++. ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|
T Consensus 293 ~E~~---------------~l~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F 356 (426)
T 3rwl_A 293 ANPA---------------LVETMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEF 356 (426)
T ss_dssp HCGG---------------GHHHHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSC
T ss_pred hChH---------------hHHHHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCcc
Confidence 9964 899999999999999996 899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+|+||.. ..++|||.|+|. |+|..+|+ .++++.++.++.+|
T Consensus 357 ~p~R~~~---------~~~l~FG~G~r~--C~G~~lA~---------~e~~~~l~~ll~~f 397 (426)
T 3rwl_A 357 IIDRPRP---------RQHLSFGFGIHR--CVGNRLAE---------MQLRILWEEILTRF 397 (426)
T ss_dssp CTTCSCT---------TCCSTTCCSTTS--CSSHHHHH---------HHHHHHHHHHHTTC
T ss_pred CCCCCCC---------CCccCCCCCCcC--CccHHHHH---------HHHHHHHHHHHHhC
Confidence 9999953 468999999998 55555555 55666667666665
No 143
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.96 E-value=1.1e-29 Score=272.75 Aligned_cols=170 Identities=18% Similarity=0.201 Sum_probs=147.3
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..++++++++.. ..|+++.+++. .++++++++++..+++||+|||+++++|++++|++ |++|++++
T Consensus 169 ~~~~~~i~~r~~~~--~~dll~~ll~~---------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~ 236 (367)
T 3b4x_A 169 SFSKKELDSRKGKE--IVDLTGKIANS---------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVR 236 (367)
T ss_dssp HHHHHHHHHHTTTC--CSSHHHHHHTS---------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHHHHHHHHhcCC--CCCHHHHHHhc---------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHH
Confidence 45666777776543 35888888742 48999999999999999999999999999999999 99999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|++ ++||+|+||++|+++ .++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus 237 ~e~~-----------------~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F 298 (367)
T 3b4x_A 237 EKGA-----------------LKAVEEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSF 298 (367)
T ss_dssp HHCS-----------------HHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSC
T ss_pred hCCc-----------------hHHHHHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCcccc
Confidence 9953 799999999999999 6999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
+||||. ..++|||.|+|. |+|.++ |..++++.++.++.+|
T Consensus 299 ~PeR~~----------~~~l~FG~G~r~--C~G~~l---------A~~e~~~~l~~ll~~f 338 (367)
T 3b4x_A 299 IPDRTP----------NPHLSFGSGIHL--CLGAPL---------ARLEARIALEEFAKKF 338 (367)
T ss_dssp CTTCSS----------CCCCTTCCSTTS--CTTHHH---------HHHHHHHHHHHHHHHE
T ss_pred CCCCCC----------CCCcCCCCCCcc--CccHHH---------HHHHHHHHHHHHHHhC
Confidence 999994 258999999998 555555 4455667777777665
No 144
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.96 E-value=1.3e-29 Score=278.39 Aligned_cols=177 Identities=20% Similarity=0.229 Sum_probs=147.5
Q ss_pred hhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy14413 4 ADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 83 (711)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~ 83 (711)
++..+++++++++. ..|+++.+++. ..++..++++++++++..+++||+|||+++++|++++|++||++|++++
T Consensus 222 ~~~~~~i~~r~~~~--~~dll~~ll~~----~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~ 295 (433)
T 3ivy_A 222 GYAMKMAEEKAKNP--ADDIVTQLIQA----DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK 295 (433)
T ss_dssp HHHHHHHHHC---------CHHHHHSC----C--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHhcCC--CCcHHHHHHhh----hcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 45666777766544 34888888853 2234469999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCC
Q psy14413 84 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163 (711)
Q Consensus 84 ~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F 163 (711)
+|++ ++||+|+||++|+++. ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|
T Consensus 296 ~E~~-----------------~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F 357 (433)
T 3ivy_A 296 KVRP-----------------ETAADEIVRWATPVTA-FQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTF 357 (433)
T ss_dssp HHCC-----------------TTHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSC
T ss_pred hCcc-----------------cchhHHHhhhCcchhc-eeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCcc
Confidence 9964 6999999999999996 799999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCccccC-CCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 164 RPERFIHPTSGEVLYDETLIPFG-LDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 164 ~P~Rfl~~~~~~~~~~~~~lpFG-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
+|+||.. .++||| .|+|. |+ |+.+|..++++.++.++.+|+
T Consensus 358 ~p~R~~~----------~~l~FGg~G~r~--C~---------G~~lA~~e~~~~l~~ll~~f~ 399 (433)
T 3ivy_A 358 NILRNPN----------PHVGFGGTGAHY--CI---------GANLARMTINLIFNAVADHMP 399 (433)
T ss_dssp CTTCCSC----------CCCTTCSSSTTC--CT---------THHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCCCC----------CCCCCCCCCCcc--CC---------CHHHHHHHHHHHHHHHHHhCC
Confidence 9999942 589999 99998 44 455555667777787777766
No 145
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.96 E-value=1.1e-29 Score=282.36 Aligned_cols=185 Identities=10% Similarity=0.111 Sum_probs=152.1
Q ss_pred hhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHh-hcCchhHHHHHHHHHHHHHh-ChHHHHHHHHHHhhh--C---CCC
Q psy14413 21 YDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLF-MAGSETTSNSLSFSVLYLIR-YPHVQRKIQEEIDSL--N---KEP 93 (711)
Q Consensus 21 ~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~--~---~~~ 93 (711)
.|+++.++++..+ .++++++++.+++.++ ++|++||+++++|++++|++ ||++|+++++|++++ . ..+
T Consensus 245 ~~~~~~ll~~~~~-----~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~ 319 (473)
T 3dan_A 245 QSVATPVMEQAEK-----LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNV 319 (473)
T ss_dssp HHHCHHHHHHHHH-----HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSC
T ss_pred HHHHHHHHHhHhh-----cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCC
Confidence 3444445554322 3589999998886666 78888999999999999999 899999999999877 2 467
Q ss_pred CccccCCCchhHHHhhhccccccCCccccceecccccee----cCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCC
Q psy14413 94 TILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRL----GSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFI 169 (711)
Q Consensus 94 ~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l----~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl 169 (711)
+.+++.+|||+++||+|+||++|+++. ..|++++|+++ +||.||||+.|.++.+++||||++|+||++|+|+||+
T Consensus 320 ~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~ 398 (473)
T 3dan_A 320 TLEAIEQMPLTKSVVYESLRIEPPVPP-QYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFV 398 (473)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTTTS
T ss_pred CHHHHhcCchHHHHHHHHHhcCCCccc-ccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCCcccCCccccC
Confidence 888899999999999999999999997 55669999999 9999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCCccccCCCc---------ccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 170 HPTSGEVLYDETLIPFGLDP---------GYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 170 ~~~~~~~~~~~~~lpFG~G~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+.. .....++|||.|+ |. |+|+.+|..+++++++.++.+|++
T Consensus 399 ~~~----~~~~~~~~fg~G~~~~~Fg~G~~~-----------C~G~~lA~~e~~~~l~~ll~~f~~ 449 (473)
T 3dan_A 399 GDG----EALLKYVWWSNGPETESPTVENKQ-----------CAGKDFVVLITRLFVIELFRRYDS 449 (473)
T ss_dssp GGG----GGGGGGCCTTSSCTTSCCCTTSCS-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCc----ccccccceecCCcCcCCCCCCCCC-----------CCcHHHHHHHHHHHHHHHHHhCCe
Confidence 741 1233455555555 77 566666667788888888888764
No 146
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.96 E-value=4.9e-30 Score=287.03 Aligned_cols=176 Identities=15% Similarity=0.073 Sum_probs=146.2
Q ss_pred CCCCHHHHHHHHHHHh-hcCchhHHHHHHHHHHHHHh-ChHHHHHHHHHHhhh----CCCCCccccCCCchhHHHhhhcc
Q psy14413 39 SSFSDDQLLVLLLDLF-MAGSETTSNSLSFSVLYLIR-YPHVQRKIQEEIDSL----NKEPTILDRYKCPYLEATIMEIM 112 (711)
Q Consensus 39 ~~~~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~----~~~~~~~~~~~lp~l~~~i~E~l 112 (711)
.++++++++.+++.++ +||++||+.+++|++++|+. ||++|+++++|++++ ...++.+++.+|||+++||+|+|
T Consensus 276 ~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~l 355 (495)
T 3dsk_A 276 LGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECL 355 (495)
T ss_dssp TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHH
Confidence 3589999998666665 99999999999999999995 999999999999987 25678888999999999999999
Q ss_pred ccccCCccccceecccccee----cCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCC------CcCCCCc
Q psy14413 113 RHGNTAPIGVAHRAMKTSRL----GSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE------VLYDETL 182 (711)
Q Consensus 113 Rl~~~~~~~~~r~~~~d~~l----~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~------~~~~~~~ 182 (711)
|++|+++. ..|++.+|+++ +||.||||+.|+++.+++||||++|+||++|+|+||++.+... ......+
T Consensus 356 Rl~p~~~~-~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~ 434 (495)
T 3dsk_A 356 RFEPPVTA-QYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPET 434 (495)
T ss_dssp HHSCSSCE-EEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCHHHHHHGGGGCCTTSSCTT
T ss_pred hcCCCccc-cceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCCCCccchhhcccccCCcCc
Confidence 99999997 56779999999 4999999999999999999999999999999999999742111 0111234
Q ss_pred cccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 183 IPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 183 lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+|||+|+|. |+|+.+|..++++.++.++.+|++
T Consensus 435 ~~fg~G~r~-----------C~G~~lA~~e~~~~l~~ll~~f~~ 467 (495)
T 3dsk_A 435 ETPTVGNKQ-----------CAGKDFVVLVARLFVIEIFRRYDS 467 (495)
T ss_dssp SCCCTTSCS-----------CTTHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCCCCCCCc-----------CchHHHHHHHHHHHHHHHHHHCce
Confidence 455555576 566666667788888888888765
No 147
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.96 E-value=1.3e-29 Score=277.11 Aligned_cols=188 Identities=17% Similarity=0.203 Sum_probs=154.2
Q ss_pred hhhHHHHHHhhhcc--CchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHH
Q psy14413 4 ADKTEIVSDHKKNT--DKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81 (711)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~ 81 (711)
++..++++++++.. ....|+++.+++.. ..++..++++++...++.++ ||++||+++++|++++|++||++|++
T Consensus 191 ~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~---~~~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~ 266 (415)
T 3awm_A 191 AWAKRIIEGIRAGSIGSGSGTAAYAIAWHR---DRHDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAA 266 (415)
T ss_dssp HHHHHHHHHHHHTSSCCCTTSHHHHHHHCB---CTTSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHhhh---hccCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHH
Confidence 45667777776642 23458999887531 22334588888887766554 89999999999999999999999999
Q ss_pred HHHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCC
Q psy14413 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161 (711)
Q Consensus 82 l~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~ 161 (711)
+++| +||+++||+|+||++|+++. ++|.+.+|++++|+.||||+.|.++.+++||||++|+||+
T Consensus 267 l~~e---------------~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~ 330 (415)
T 3awm_A 267 LVQQ---------------PDYAELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQ 330 (415)
T ss_dssp HHHC---------------TTHHHHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTT
T ss_pred HHHH---------------HHHHHHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCcc
Confidence 9986 47999999999999999996 8999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCccccCCCc----ccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 162 VFRPERFIHPTSGEVLYDETLIPFGLDP----GYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 162 ~F~P~Rfl~~~~~~~~~~~~~lpFG~G~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+|+|+||++.+. .+..++|||.|+ |. | +|+.+|..++++.++.++.+|++
T Consensus 331 ~F~P~R~~~~~~----~~~~~~~FG~G~r~~~r~--C---------~G~~lA~~e~~~~l~~ll~~f~~ 384 (415)
T 3awm_A 331 EFRPERFRAWDE----DSFNFIPQGGGDHYLGHR--C---------PGEWIVLAIMKVAAHLLVNAMRY 384 (415)
T ss_dssp SCCGGGGGGCCC----CSSSCCTTCCSCTTTSCC--C---------TTHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccChhhcCCCCC----CCCCccCCCCCCCCCCCc--C---------chHHHHHHHHHHHHHHHHHhcEE
Confidence 999999986431 346899999994 77 4 45555556677778888777654
No 148
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.95 E-value=1e-28 Score=262.67 Aligned_cols=159 Identities=19% Similarity=0.215 Sum_probs=138.0
Q ss_pred hhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCCCCCccccCC
Q psy14413 21 YDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYK 100 (711)
Q Consensus 21 ~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 100 (711)
.| ++.+++. ..++..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+
T Consensus 158 ~d-l~~ll~~----~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-------------- 218 (343)
T 2rfb_A 158 GI-INVLAGS----SLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR-------------- 218 (343)
T ss_dssp SH-HHHHHTC----BCSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH--------------
T ss_pred cc-HHHHHhh----hcCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc--------------
Confidence 35 6666642 1223469999999999999999999999999999999999999999999985
Q ss_pred CchhHHHhhhccccccCC-ccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCCcCC
Q psy14413 101 CPYLEATIMEIMRHGNTA-PIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYD 179 (711)
Q Consensus 101 lp~l~~~i~E~lRl~~~~-~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~ 179 (711)
++||+|+||++|++ + .++|.+.+|++++||.||||+.|.++.+++||||++|+||++|+|||+
T Consensus 219 ----~a~i~E~lRl~p~~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~----------- 282 (343)
T 2rfb_A 219 ----SGFVEETLRYYSPIQF-LPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR----------- 282 (343)
T ss_dssp ----HHHHHHHHHHSCSBCC-BCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----------
T ss_pred ----HHHHHHHHhhCccccc-ccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-----------
Confidence 79999999999999 8 699999999999999999999999999999999999999999999994
Q ss_pred CCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 180 ETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 180 ~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
..++|||.|+|. |+| +.+|..++++.++.++.+|+
T Consensus 283 ~~~~~FG~G~r~--C~G---------~~lA~~e~~~~la~ll~~f~ 317 (343)
T 2rfb_A 283 EMHLAFGIGIHM--CLG---------APLARLEASIALNDILNHFK 317 (343)
T ss_dssp SCCCTTCCSTTS--CTT---------HHHHHHHHHHHHHHHHHHCS
T ss_pred CCCccCCCCCcc--CCC---------hHHHHHHHHHHHHHHHHhCC
Confidence 258999999998 444 55555567777777777664
No 149
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.95 E-value=8.4e-29 Score=265.99 Aligned_cols=157 Identities=24% Similarity=0.317 Sum_probs=138.0
Q ss_pred hhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCCCCCccccCC
Q psy14413 21 YDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYK 100 (711)
Q Consensus 21 ~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 100 (711)
.|+++.+++. .++++++.+++..+++||+|||+++++|++++|++|| +|+++++| +
T Consensus 183 ~d~l~~ll~~---------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~------------- 238 (368)
T 1io7_A 183 TEVVSRVVNS---------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N------------- 238 (368)
T ss_dssp CHHHHHHHTS---------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T-------------
T ss_pred CCHHHHHHhc---------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c-------------
Confidence 4788877742 4899999999999999999999999999999999999 99999999 3
Q ss_pred CchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCCcCCC
Q psy14413 101 CPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDE 180 (711)
Q Consensus 101 lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~ 180 (711)
|+++||+|++|++|+++ .++|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+|||+ +.
T Consensus 239 --~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~ 305 (368)
T 1io7_A 239 --LYLKAIEEALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN----------PN 305 (368)
T ss_dssp --CHHHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC----------SC
T ss_pred --hHHHHHHHHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC----------CC
Confidence 79999999999999999 689999999999999999999999999999999999999999999994 13
Q ss_pred CccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHHH
Q psy14413 181 TLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQ 225 (711)
Q Consensus 181 ~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 225 (711)
.++|||.|+|. |+|..+| ..++++.++.++.+|+
T Consensus 306 ~~~~FG~G~r~--C~G~~lA---------~~e~~~~l~~ll~~f~ 339 (368)
T 1io7_A 306 PHLSFGSGIHL--CLGAPLA---------RLEARIAIEEFSKRFR 339 (368)
T ss_dssp CCCTTCCGGGS--CTTHHHH---------HHHHHHHHHHHHTTCS
T ss_pred CCcCCCCCccC--CCCHHHH---------HHHHHHHHHHHHHhCC
Confidence 58999999998 5555554 4556666666666653
No 150
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.95 E-value=1.2e-28 Score=266.38 Aligned_cols=175 Identities=16% Similarity=0.231 Sum_probs=151.4
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
+++..+++++++++.. .|+++.+++. + +..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus 181 ~~~~~~~i~~~~~~~~--~d~l~~ll~~--~----~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l 252 (384)
T 3oo3_A 181 VNYTKRLTSGKRRDPG--DGMIGVIVRE--H----GAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALL 252 (384)
T ss_dssp HHHHHHHHHHHHHSCC--SSHHHHHHHH--H----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC--CCHHHHHHHh--c----CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 3456677777766443 5999999975 1 134899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|++. +++||+|+||++|+++..++|.+.+|++++|+.||||+.|.++.+++|| +||++
T Consensus 253 ~~E~~~---------------l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~ 312 (384)
T 3oo3_A 253 REKPEL---------------IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDR 312 (384)
T ss_dssp HHCGGG---------------HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCC
T ss_pred HhCHHH---------------HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcce
Confidence 999873 8999999999999998778999999999999999999999999999999 89999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH-HH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA-QF 226 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 226 (711)
|+|||| +..++|||.|+|. |+|+.+|..++++.++.++.+| ++
T Consensus 313 F~PeR~----------~~~~~~FG~G~r~-----------C~G~~lA~~e~~~~l~~ll~~f~~~ 356 (384)
T 3oo3_A 313 FDITRE----------KATHMAFGHGIHH-----------CIGAPLARLQLRVALPAVVGRFPSL 356 (384)
T ss_dssp CCTTCS----------CCCCCTTCCSTTS-----------CTTHHHHHHHHHHHHHHHHHHCTTC
T ss_pred eCCCCC----------CCCcCCCCCCCcC-----------CCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 999996 2468999999988 5555556666788888888777 54
No 151
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.95 E-value=2.8e-28 Score=265.77 Aligned_cols=162 Identities=20% Similarity=0.282 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCCCCCccccCCC
Q psy14413 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101 (711)
Q Consensus 22 d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l 101 (711)
|.++.++.. ..++..++++++.+++..+++||+|||+++++|++++|++||++|++|++|..
T Consensus 221 ~~~~~l~~~----~~~~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~~-------------- 282 (412)
T 4dnj_A 221 GGFGACIHA----FSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPS-------------- 282 (412)
T ss_dssp TSHHHHHHH----TTTTTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG--------------
T ss_pred ccchhhhHh----hhhccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCcc--------------
Confidence 445555543 23345689999999999999999999999999999999999999999998753
Q ss_pred chhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCCcCCCC
Q psy14413 102 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 181 (711)
Q Consensus 102 p~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~ 181 (711)
++.++++|++|++|+++. +.|.+++|++++|+.||||+.|.++.+++||||++|+||++|+||||.. .
T Consensus 283 -~~~~~~eE~lR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~~----------~ 350 (412)
T 4dnj_A 283 -LARNAFEEAVRFESPVQT-FFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTS----------G 350 (412)
T ss_dssp -GHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCT----------T
T ss_pred -ccccccceeeeecCCccc-ccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCCC----------C
Confidence 788999999999999985 8999999999999999999999999999999999999999999999843 5
Q ss_pred ccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 182 LIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 182 ~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+|||.|+|. |+|.++|+ .++++.++.++.+|
T Consensus 351 ~lpFG~G~r~--CiG~~lA~---------~E~~~~l~~Ll~rf 382 (412)
T 4dnj_A 351 HVGFGSGVHM--CVGQLVAR---------LEGEVVLAALARKV 382 (412)
T ss_dssp CCTTCCSTTS--CTTHHHHH---------HHHHHHHHHHHHHE
T ss_pred CCCcCCCCcC--ChhHHHHH---------HHHHHHHHHHHHHC
Confidence 8999999998 55555554 55667777776664
No 152
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.95 E-value=5.4e-29 Score=269.61 Aligned_cols=155 Identities=23% Similarity=0.378 Sum_probs=136.4
Q ss_pred CCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCCCCCccccCCCchhHHHhhhccccccCCc
Q psy14413 40 SFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAP 119 (711)
Q Consensus 40 ~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~ 119 (711)
+++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+ .+||+|+||++|+++
T Consensus 205 ~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~---------------~a~i~E~lRl~p~~~ 269 (389)
T 1n97_A 205 HLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA---------------LAAFQEALRLYPPAW 269 (389)
T ss_dssp GSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH---------------HHHHHHHHHHSCSSC
T ss_pred cCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH---------------HHHHHHHHhcCCCcc
Confidence 48999999999999999999999999999999999999999999999853 299999999999999
Q ss_pred cccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhH
Q psy14413 120 IGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGL 199 (711)
Q Consensus 120 ~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~ 199 (711)
. .+|.+.+|++++|+.||||+.|.++.+++||| +|+||++|+||||++.. ...+..++|||.|+|. |+|
T Consensus 270 ~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~---~~~~~~~~~FG~G~r~--C~G--- 338 (389)
T 1n97_A 270 I-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER---GTPSGRYFPFGLGQRL--CLG--- 338 (389)
T ss_dssp C-EEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC---CCCBTTBCTTCCSTTC--CTT---
T ss_pred c-cceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC---CCCCCCccCCCCCCCC--Cch---
Confidence 7 69999999999999999999999999999999 99999999999998641 1234689999999998 445
Q ss_pred HHHHHhhhhcccchhhhhHHHHHHHHH
Q psy14413 200 KKLYVTKILGFRDDEMCAATVLFEAQF 226 (711)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~l~~~~~ 226 (711)
+.+|..++++.++.++.+|++
T Consensus 339 ------~~lA~~e~~~~la~ll~~f~~ 359 (389)
T 1n97_A 339 ------RDFALLEGPIVLRAFFRRFRL 359 (389)
T ss_dssp ------HHHHHHHHHHHHHHHHTTCBC
T ss_pred ------HHHHHHHHHHHHHHHHHhceE
Confidence 455555677777777777654
No 153
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.93 E-value=7.1e-26 Score=246.59 Aligned_cols=178 Identities=17% Similarity=0.119 Sum_probs=142.0
Q ss_pred hhhhHHHHHHhhhccCchhhHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy14413 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKI 82 (711)
Q Consensus 3 r~~~~~~~~~~~~~~~~~~d~l~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l 82 (711)
..+..++++++++... +|+++.++.. ..++..++++++.+++..+++||+|||+++++|++++|++||++++++
T Consensus 208 ~~~~~~li~~rr~~~~--ddl~s~L~~~----~~~~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l 281 (417)
T 4dxy_A 208 YAYVDPIIRARVGGDG--DDLITLMVNS----EINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAEL 281 (417)
T ss_dssp HHHHHHHHHHHTTCCC--CSHHHHHHTC----EETTEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCc--cchhhhhccc----cccCCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhh
Confidence 3456667777666544 4888877743 234456899999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceeccccceecCeeeCCCCEEEechhhhccCCCCCCCCCC
Q psy14413 83 QEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDV 162 (711)
Q Consensus 83 ~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~ 162 (711)
++|... +..++ |.+|++++.+ .+.|.+++|++++|+.||+|+.|.++++++||||++|+||++
T Consensus 282 ~~e~~~---------------~~~av-ee~~~~~~~~-~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~ 344 (417)
T 4dxy_A 282 RSDPLK---------------LMRGA-EEMFRRFPVV-SEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWK 344 (417)
T ss_dssp HHCHHH---------------HHHTH-HHHHHHSCCB-EEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTS
T ss_pred ccCccc---------------cccce-eeeecccccc-ccccccccceEecCccccCCCEEEEeehhhcCChhhCCCccc
Confidence 998653 22333 4444444444 478999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhhhcccchhhhhHHHHHHH
Q psy14413 163 FRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEA 224 (711)
Q Consensus 163 F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 224 (711)
|+|+|+ +..++|||.|+|. |+|.++|+ .++++.++.++.+|
T Consensus 345 FdpeR~----------~~~~l~FG~G~r~--ClG~~LA~---------~E~~i~l~~Ll~rf 385 (417)
T 4dxy_A 345 LDFSRR----------SISHSTFGGGPHR--CAGMHLAR---------MEVIVTLEEWLKRI 385 (417)
T ss_dssp CCTTCS----------CCCCCTTCCGGGS--CTTHHHHH---------HHHHHHHHHHHHHC
T ss_pred cCCCCC----------CCCCCCcCCCccc--CccHHHHH---------HHHHHHHHHHHHhC
Confidence 999994 2368999999998 66666555 45666666666664
No 154
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.92 E-value=7.4e-26 Score=241.64 Aligned_cols=142 Identities=19% Similarity=0.183 Sum_probs=119.7
Q ss_pred HHHHHHhhcCchhHHHHHHHHHHHHHhChHHHHHHHHHHhhhCCCCCccccCCCchhHHHhhhccccccCCccccceecc
Q psy14413 48 VLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAM 127 (711)
Q Consensus 48 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~lp~l~~~i~E~lRl~~~~~~~~~r~~~ 127 (711)
++++.+++||+|||+++++|++++|++||++++++++|+. |++++|+|+||++|+++. +.|.+.
T Consensus 214 ~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~---------------~l~~~i~E~LR~~pp~~~-~~R~a~ 277 (381)
T 2yjn_B 214 DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA---------------AAQRTVAEVLRLHPALHL-ERRTAT 277 (381)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC-----------------HHHHHHHHHHSCSCSE-EEEEES
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH---------------HHHHHhCeeeeecCCCcc-eeEEEC
Confidence 5688899999999999999999999999999999999864 899999999999999995 889999
Q ss_pred ccceecCeeeCCCCEEEechhhhccCCCCCCCCCCCCCCCCCCCCCCCCcCCCCccccCCCcccchhhhhhHHHHHHhhh
Q psy14413 128 KTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKI 207 (711)
Q Consensus 128 ~d~~l~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~lpFG~G~~~~~~~~~~~~~~~~~~~ 207 (711)
+|++++|+.||||+.|+++.+++||||++|+||++|+|+||++ ..++|||.| |. |+|..+|+
T Consensus 278 ~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~---------~~~l~FG~G-h~--C~G~~lA~------ 339 (381)
T 2yjn_B 278 AEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA---------DRALSAHRG-HP--GRLEELVT------ 339 (381)
T ss_dssp SCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC---------CCCCC-----CC--SSHHHHHH------
T ss_pred CCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC---------CCccCCCCC-CC--CchHHHHH------
Confidence 9999999999999999999999999999999999999999973 368999999 98 66666655
Q ss_pred hcccchhhhhHHHHHHH-HH
Q psy14413 208 LGFRDDEMCAATVLFEA-QF 226 (711)
Q Consensus 208 ~~~~~~~~~~~~~l~~~-~~ 226 (711)
.++++.++.++.+| ++
T Consensus 340 ---~e~~~~l~~ll~~~p~~ 356 (381)
T 2yjn_B 340 ---ALATAALRAAAKALPGL 356 (381)
T ss_dssp ---HHHHHHHHHTTTTCCC-
T ss_pred ---HHHHHHHHHHHHhCCCc
Confidence 44666666676666 55
No 155
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.92 E-value=1.1 Score=36.36 Aligned_cols=64 Identities=11% Similarity=-0.034 Sum_probs=50.1
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHc-CCeeEEeecCeeEEEEcCHHHHHHHhhc---CCCCCCCCcch
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRY-GPITGLRLGRDRIILVSGFKAVREVLTR---DEFDGRPSGYF 701 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~y-g~v~~~~~g~~~~vv~~~~~~~~e~~~~---~~f~~r~~~~~ 701 (711)
-+||||+.=.+ ...+...|+++..+| |+|..+ .|+.=+|+..+.|.++.+++. .++.+||....
T Consensus 12 lYV~NL~~~~~----~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i~v~ 79 (96)
T 2diu_A 12 LYVYNLPANKD----GKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRIIVS 79 (96)
T ss_dssp EEEESCCTTSC----HHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCCEEE
T ss_pred EEEeCCCCcCC----HHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceEEEE
Confidence 44999998531 133455688999999 599999 689999999999999999843 57889987653
No 156
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=78.41 E-value=3.8 Score=34.23 Aligned_cols=69 Identities=10% Similarity=0.030 Sum_probs=51.3
Q ss_pred CCCCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEee---c---CeeEEEEcCHHHHHHHhh---cCCCC
Q psy14413 624 LNVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRL---G---RDRIILVSGFKAVREVLT---RDEFD 694 (711)
Q Consensus 624 ~~ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~---g---~~~~vv~~~~~~~~e~~~---~~~f~ 694 (711)
+.||.|..--+||||+.-. ..+.+.++..+||+|..+++ + +.=.|-..+.+.+..++. +..+.
T Consensus 2 r~~~~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 73 (115)
T 3lqv_A 2 RLPPEVNRILYIRNLPYKI--------TAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDHLSGFNVS 73 (115)
T ss_dssp -CCTTCCSEEEEESCCTTC--------CHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred CCCCCCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 3577777788999998642 23567788899999999998 2 356888999999999884 33577
Q ss_pred CCCCcc
Q psy14413 695 GRPSGY 700 (711)
Q Consensus 695 ~r~~~~ 700 (711)
+|+-..
T Consensus 74 g~~l~v 79 (115)
T 3lqv_A 74 NRYLVV 79 (115)
T ss_dssp SCBCEE
T ss_pred CeEEEE
Confidence 776443
No 157
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=68.36 E-value=12 Score=28.71 Aligned_cols=64 Identities=11% Similarity=0.034 Sum_probs=44.1
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec-------CeeEEEEcCHHHHHHHhhc---CCCCCC-CC
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG-------RDRIILVSGFKAVREVLTR---DEFDGR-PS 698 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-------~~~~vv~~~~~~~~e~~~~---~~f~~r-~~ 698 (711)
-++|||+.-.. .+.....+.+.++..+||+|..+++- +.=.|-..+.+.++.++.. ..+.+| +-
T Consensus 4 l~V~nLp~~~~--~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~lng~~~~g~~~l 78 (81)
T 2krb_A 4 IVVDNVPQVGP--DRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTF 78 (81)
T ss_dssp EEEESCCCCCT--TTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTTSSSCCCSSSSCC
T ss_pred EEEeCCCCCcH--HHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHHhcCcccCCceeE
Confidence 36788875310 00001346678888999999999885 3457888999999999954 358887 53
No 158
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.86 E-value=11 Score=29.91 Aligned_cols=66 Identities=21% Similarity=0.142 Sum_probs=48.2
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCC
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFD 694 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~ 694 (711)
|.|..--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|...+.+.++.++.. ..+.
T Consensus 2 ~~~~~~l~v~nlp~~~--------t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 73 (95)
T 2dnz_A 2 SSGSSGLYVGSLHFNI--------TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELA 73 (95)
T ss_dssp CSCCCEEEEESCCTTC--------CHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSS
T ss_pred CCCCcEEEEeCCCCCC--------CHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeC
Confidence 3344567889998631 2356778889999999998844 447888999999999853 3588
Q ss_pred CCCCcc
Q psy14413 695 GRPSGY 700 (711)
Q Consensus 695 ~r~~~~ 700 (711)
+|+-..
T Consensus 74 g~~l~V 79 (95)
T 2dnz_A 74 GRPMRV 79 (95)
T ss_dssp SSCCEE
T ss_pred CcEEEE
Confidence 887654
No 159
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=67.71 E-value=10 Score=30.75 Aligned_cols=71 Identities=8% Similarity=0.033 Sum_probs=49.4
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc---CCCC
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR---DEFD 694 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~---~~f~ 694 (711)
.|....-+||||+..... +.....+.+.++..+||+|..+++- +.=.|-..+.+.++.++.. ..+.
T Consensus 3 ~~~~~~vfV~nLp~v~~~--~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~lng~~~~ 80 (100)
T 3ns6_A 3 LGSDQYIVVNGAPVIPSA--KVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLD 80 (100)
T ss_dssp SCGGGEEEEESCCCCBGG--GHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred CCcCcEEEEeCCCcCChH--HHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHHhCCcccC
Confidence 344456788999874211 1123446788888999999999984 3457889999999999843 3587
Q ss_pred C-CCCc
Q psy14413 695 G-RPSG 699 (711)
Q Consensus 695 ~-r~~~ 699 (711)
+ |+-.
T Consensus 81 g~r~l~ 86 (100)
T 3ns6_A 81 LKHRLF 86 (100)
T ss_dssp SSCBCE
T ss_pred CCeEEE
Confidence 7 7643
No 160
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=67.35 E-value=17 Score=31.00 Aligned_cols=67 Identities=19% Similarity=0.218 Sum_probs=48.7
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f 693 (711)
.|.|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. ..+
T Consensus 42 ~~~~~~~l~V~nLp~~~--------te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~lng~~i 113 (129)
T 2kxn_B 42 NPDPNCCLGVFGLSLYT--------TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 113 (129)
T ss_dssp CCCCSSCBCEETCTTSC--------CHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHHHTTCCS
T ss_pred CCCCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCEE
Confidence 44555567899998742 2346778889999999999842 457888999999999853 347
Q ss_pred CCCCCcc
Q psy14413 694 DGRPSGY 700 (711)
Q Consensus 694 ~~r~~~~ 700 (711)
.+|+-..
T Consensus 114 ~g~~l~V 120 (129)
T 2kxn_B 114 DGRRIRV 120 (129)
T ss_dssp SSSCCEE
T ss_pred CCEEEEE
Confidence 7776543
No 161
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.09 E-value=14 Score=29.81 Aligned_cols=68 Identities=13% Similarity=0.136 Sum_probs=49.0
Q ss_pred CCCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHH-cCCeeEEeec--------CeeEEEEcCHHHHHHHhhc---CC
Q psy14413 625 NVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARR-YGPITGLRLG--------RDRIILVSGFKAVREVLTR---DE 692 (711)
Q Consensus 625 ~ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~-yg~v~~~~~g--------~~~~vv~~~~~~~~e~~~~---~~ 692 (711)
..+.|..--+||||+.-. -.+.+.++..+ ||+|..+++- +.=.|-..+.+.++.++.. ..
T Consensus 4 ~~~~~~~~l~V~nLp~~~--------t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~ 75 (104)
T 2dhg_A 4 GSSGPEYSLFVGDLTPDV--------DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAV 75 (104)
T ss_dssp CCSSCCCCEEEECCCTTC--------CHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHHTTTCC
T ss_pred CCCCCCcEEEEeCCCCCC--------CHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHHccCCc
Confidence 345566678899998742 23567778888 9999999883 2457888999999999853 34
Q ss_pred -CCCCCCcc
Q psy14413 693 -FDGRPSGY 700 (711)
Q Consensus 693 -f~~r~~~~ 700 (711)
+.+|+-..
T Consensus 76 ~~~g~~l~v 84 (104)
T 2dhg_A 76 GLGSKPVRL 84 (104)
T ss_dssp SSSSSCCCC
T ss_pred ccCCEeEEE
Confidence 77776544
No 162
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=65.82 E-value=11 Score=30.76 Aligned_cols=62 Identities=2% Similarity=0.068 Sum_probs=47.8
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec--------CeeEEEEcCHHHHHHHhhcC--CCCCCCCcc
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG--------RDRIILVSGFKAVREVLTRD--EFDGRPSGY 700 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g--------~~~~vv~~~~~~~~e~~~~~--~f~~r~~~~ 700 (711)
.--+||||+.-. ..+.+.++..+||+|..+++- +.=.|...+.+.++.++..+ .|.+|+-..
T Consensus 12 ~~lfV~~Lp~~~--------te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~~gr~l~V 83 (103)
T 1s79_A 12 RSVYIKGFPTDA--------TLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKETDLLI 83 (103)
T ss_dssp GCEEEECCCTTC--------CHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCCTTTTCEE
T ss_pred CEEEEECCCCCC--------CHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEECCEEEEE
Confidence 457889998742 245677888999999999884 35678889999999999643 588887654
No 163
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=62.06 E-value=11 Score=31.14 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=45.6
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc---CCCCCCCCcc
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR---DEFDGRPSGY 700 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~---~~f~~r~~~~ 700 (711)
.-+||||+.- -..+.+.++..+||+|..+++- +.=.|...+.+.++.++.. ..|.+|+-..
T Consensus 12 ~l~V~nLp~~--------~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V 78 (111)
T 1whx_A 12 VILAKNLPAG--------TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYL 78 (111)
T ss_dssp EEEEESCCTT--------CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEE
T ss_pred EEEEeCCCCC--------CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeEEEE
Confidence 4678998763 1245678889999999999983 3567888999999988843 3588887543
No 164
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=60.18 E-value=9.1 Score=28.78 Aligned_cols=57 Identities=12% Similarity=0.135 Sum_probs=41.7
Q ss_pred cccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 634 VVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 634 ~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
++|||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.++.++..+ .+.+|+-
T Consensus 3 ~v~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g~~l 70 (75)
T 1iqt_A 3 FVGGLSPDT--------PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKC 70 (75)
T ss_dssp EESCCCSSC--------CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSSCCBTTBCC
T ss_pred EEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCCCeECCEEE
Confidence 567776531 2356778889999999998832 4578889999999999654 4766654
No 165
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=58.38 E-value=6 Score=30.88 Aligned_cols=65 Identities=12% Similarity=0.071 Sum_probs=44.0
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f 693 (711)
|..|..--++|||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.+..++.. + .+
T Consensus 2 p~~~~~~l~v~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 73 (87)
T 3bs9_A 2 PLGSHFHVFVGDLSPEI--------TTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 73 (87)
T ss_dssp ----CEEEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred CCCCceEEEEeCCCCCC--------CHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCEE
Confidence 34444457789998642 2356778889999999988843 346888999999999853 3 36
Q ss_pred CCCCC
Q psy14413 694 DGRPS 698 (711)
Q Consensus 694 ~~r~~ 698 (711)
.+|+-
T Consensus 74 ~g~~l 78 (87)
T 3bs9_A 74 GGRQI 78 (87)
T ss_dssp TTEEC
T ss_pred CCeEE
Confidence 66643
No 166
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=58.22 E-value=7 Score=31.72 Aligned_cols=58 Identities=9% Similarity=0.015 Sum_probs=43.0
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCCCCCC
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFDGRPS 698 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~~r~~ 698 (711)
.+||||+.=. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. ..+.+|+-
T Consensus 22 lfV~nLp~~~--------te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~lng~~~~gr~l 91 (99)
T 4fxv_A 22 LIVNYLPQNM--------TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTI 91 (99)
T ss_dssp EEEESCCTTC--------CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEEC
T ss_pred EEEeCCCCCC--------CHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHHhCCCEECCEEE
Confidence 6889998742 2457788889999999998842 236888999999998853 34777653
No 167
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=57.74 E-value=7.4 Score=32.52 Aligned_cols=59 Identities=7% Similarity=0.005 Sum_probs=43.7
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC-------eeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR-------DRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-------~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
--+||||+.-. -.+.|.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+.+|+-
T Consensus 7 ~lfV~nLp~~~--------te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~l~~~~~~g~~i 75 (115)
T 4f25_A 7 NIFIKNLDKSI--------DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 75 (115)
T ss_dssp EEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHHHTTCEETTEEC
T ss_pred EEEECCCCCCC--------CHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHHcCCCEECCEEE
Confidence 37899998742 2457888899999999988742 347899999999999843 2 3666643
No 168
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=57.58 E-value=27 Score=27.66 Aligned_cols=66 Identities=14% Similarity=0.090 Sum_probs=47.5
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---eeEEEEcCHHHHHHHhhc-C--CCC--CCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---DRIILVSGFKAVREVLTR-D--EFD--GRP 697 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---~~~vv~~~~~~~~e~~~~-~--~f~--~r~ 697 (711)
.+.|..--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.++.++.. + .+. +|+
T Consensus 13 ~~~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~g~~ 84 (97)
T 1why_A 13 KANPTTRLWVGGLGPNT--------SLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRR 84 (97)
T ss_dssp CCCCCSCEEEECCCSSC--------CHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCB
T ss_pred CCCCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHHHCCCEeCCCCcE
Confidence 34444567899998642 2356778889999999998864 567888999999998853 3 466 665
Q ss_pred Cc
Q psy14413 698 SG 699 (711)
Q Consensus 698 ~~ 699 (711)
-.
T Consensus 85 l~ 86 (97)
T 1why_A 85 LR 86 (97)
T ss_dssp CE
T ss_pred EE
Confidence 43
No 169
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=56.25 E-value=12 Score=28.10 Aligned_cols=57 Identities=14% Similarity=0.113 Sum_probs=41.6
Q ss_pred cccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 634 VVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 634 ~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
++|||+.-. ..+.+.++..+||+|..+++-. .-.|-..+.+.++.++..+ .+.+|+-
T Consensus 3 ~v~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g~~l 70 (75)
T 2mss_A 3 FVGGLSVNT--------TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 70 (75)
T ss_dssp EEECCCSSC--------CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSCCCSSSCCC
T ss_pred EEecCCCCC--------CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCCCEECCEEE
Confidence 467776531 2356778889999999998843 4467889999999998543 4777764
No 170
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=54.39 E-value=15 Score=30.56 Aligned_cols=58 Identities=9% Similarity=0.041 Sum_probs=44.2
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec--CeeEEEEcCHHHHHHHhhc---CCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG--RDRIILVSGFKAVREVLTR---DEFDGRP 697 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g--~~~~vv~~~~~~~~e~~~~---~~f~~r~ 697 (711)
--+||||+.-. ..+.|.++..+||+|..+.+- +.=.|...+.+.++.++.. ..+.+|+
T Consensus 18 ~l~V~nLp~~~--------t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~ 80 (115)
T 3beg_B 18 RVVVSGLPPSG--------SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE 80 (115)
T ss_dssp CEEEEECCSSC--------CTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCTT
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 46789998642 234677888999999999885 3567888999999999853 3588887
No 171
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=54.29 E-value=26 Score=28.20 Aligned_cols=64 Identities=13% Similarity=0.064 Sum_probs=47.1
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDGR 696 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r 696 (711)
|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+.+|
T Consensus 14 ~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 85 (105)
T 1x5u_A 14 QDATVYVGGLDEKV--------SEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGK 85 (105)
T ss_dssp TTTEEEEECCCTTC--------CHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSC
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHHhCCCeECCe
Confidence 33457789998642 2356788889999999999854 347888999999999954 3 47777
Q ss_pred CCcc
Q psy14413 697 PSGY 700 (711)
Q Consensus 697 ~~~~ 700 (711)
+-..
T Consensus 86 ~l~v 89 (105)
T 1x5u_A 86 PIRV 89 (105)
T ss_dssp BCEE
T ss_pred EEEE
Confidence 6544
No 172
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=54.21 E-value=8.9 Score=31.83 Aligned_cols=64 Identities=11% Similarity=0.109 Sum_probs=46.8
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDGR 696 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r 696 (711)
|..--+||||..-. -.+.|.++..+||+|..+++-. .=.|...+.+.++.++.. + .+.+|
T Consensus 5 p~~~lfV~nL~~~~--------te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~lng~~~~gr 76 (110)
T 3s8s_A 5 PLKEVTFARLNDNV--------RETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSVMGN 76 (110)
T ss_dssp CCCEEEEESCCTTC--------CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCcEEEEECCCCCC--------CHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 44467899998642 2456788889999999998831 237889999999999843 3 47777
Q ss_pred CCcc
Q psy14413 697 PSGY 700 (711)
Q Consensus 697 ~~~~ 700 (711)
+-..
T Consensus 77 ~i~V 80 (110)
T 3s8s_A 77 IIHA 80 (110)
T ss_dssp ECEE
T ss_pred EEEE
Confidence 6543
No 173
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=54.13 E-value=16 Score=28.05 Aligned_cols=64 Identities=16% Similarity=0.090 Sum_probs=45.7
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCC
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFD 694 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~ 694 (711)
+.|...-+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.++.++.. ..+.
T Consensus 4 ~~~~~~l~V~nl~~~~--------~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 75 (85)
T 3mdf_A 4 ATTKRVLYVGGLAEEV--------DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELF 75 (85)
T ss_dssp CCCSSEEEEECCCTTC--------CHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred CCCCCEEEEECCCCCC--------CHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 3445567899998642 2356778889999999998822 347888999999999843 3466
Q ss_pred CCCC
Q psy14413 695 GRPS 698 (711)
Q Consensus 695 ~r~~ 698 (711)
+|+-
T Consensus 76 g~~l 79 (85)
T 3mdf_A 76 GRTI 79 (85)
T ss_dssp TEEC
T ss_pred CcEE
Confidence 6653
No 174
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=54.13 E-value=21 Score=28.96 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=43.5
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
-+||||+.-. ..+.+.++..+||+|..+++- +.=.|-..+.+.+..++.. ..+.+|+-.
T Consensus 26 l~V~nlp~~~--------t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l~ 96 (106)
T 1p27_B 26 LFVTGVHEEA--------TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPIS 96 (106)
T ss_dssp EEEECCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHHHTTCBSSSSBCE
T ss_pred EEEeCCCCCC--------CHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHHhcCCEECCcEEE
Confidence 6789998742 235677888999999999883 2346788999999999853 347777643
No 175
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=53.96 E-value=32 Score=27.51 Aligned_cols=67 Identities=13% Similarity=0.148 Sum_probs=48.5
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f 693 (711)
.+-+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. ..+
T Consensus 8 ~~~~~~~l~v~nLp~~~--------t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 79 (102)
T 1x5s_A 8 MASDEGKLFVGGLSFDT--------NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 79 (102)
T ss_dssp CCCCCSEEEEESCCTTC--------CHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCT
T ss_pred CCCCCCEEEEECCCCCC--------CHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHHhCCCEE
Confidence 33445567899998642 2356778889999999999854 446788999999999843 358
Q ss_pred CCCCCcc
Q psy14413 694 DGRPSGY 700 (711)
Q Consensus 694 ~~r~~~~ 700 (711)
.+|+-..
T Consensus 80 ~g~~l~v 86 (102)
T 1x5s_A 80 DGRQIRV 86 (102)
T ss_dssp TSCCCEE
T ss_pred CCeEEEE
Confidence 8877544
No 176
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.84 E-value=18 Score=29.15 Aligned_cols=69 Identities=10% Similarity=-0.101 Sum_probs=49.3
Q ss_pred CCCCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec-------CeeEEEEcCHHHHHHHhhc---CCC
Q psy14413 624 LNVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG-------RDRIILVSGFKAVREVLTR---DEF 693 (711)
Q Consensus 624 ~~ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-------~~~~vv~~~~~~~~e~~~~---~~f 693 (711)
+..+-+..--+||||+.-. ..+.+.++..+||+|..+.+- +.=.|-..+.+.+..++.. ..+
T Consensus 9 ~~~~~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~ 80 (103)
T 2d9p_A 9 RITRYQVVNLYVKNLDDGI--------DDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIV 80 (103)
T ss_dssp CCCCSSCCCEEEECCCTTC--------CHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTCBS
T ss_pred ccCCCCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHHhCCCEe
Confidence 3355566678899998642 235677888899999998885 2456888999999999853 347
Q ss_pred CCCCCcc
Q psy14413 694 DGRPSGY 700 (711)
Q Consensus 694 ~~r~~~~ 700 (711)
.+|+-..
T Consensus 81 ~g~~l~V 87 (103)
T 2d9p_A 81 ATKPLYV 87 (103)
T ss_dssp SSSBCEE
T ss_pred CCcEEEE
Confidence 7776443
No 177
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=53.03 E-value=25 Score=27.46 Aligned_cols=62 Identities=6% Similarity=-0.052 Sum_probs=44.6
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec-------CeeEEEEcCHHHHHHHhhc---CCCCCCCCcc
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG-------RDRIILVSGFKAVREVLTR---DEFDGRPSGY 700 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-------~~~~vv~~~~~~~~e~~~~---~~f~~r~~~~ 700 (711)
.--+||||+.-. ..+.+.++..+||+|..+.+- +.=.|-..+.+.++.++.. ..+.+|+-..
T Consensus 9 ~~l~V~nlp~~~--------t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~l~g~~~~g~~l~v 80 (92)
T 2dgv_A 9 CQIFVRNLPFDF--------TWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDV 80 (92)
T ss_dssp CEEEECSCCTTC--------CHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHHHTTCCBTTBCCCC
T ss_pred cEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHHhCCCEECCcEEEE
Confidence 356789998631 245677888999999998874 2446778899999998853 3577776433
No 178
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.07 E-value=23 Score=27.64 Aligned_cols=65 Identities=12% Similarity=0.190 Sum_probs=46.6
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC-eeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR-DRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
.+.+..--+||||+.-. ..+.+.++..+||+|..+++-. .-.|-..+.+.++.++.. + .+.+|+-
T Consensus 5 ~~~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g~~l 73 (90)
T 2dnp_A 5 SSGNTWKIFVGNVSAAC--------TSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRI 73 (90)
T ss_dssp SSCCSCCEEEESCCTTC--------CHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHHHTTCEETTEEC
T ss_pred CCCCCCEEEEeCCCCCC--------CHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHHhCCCEECCcEE
Confidence 34445567899998742 2356778889999999998854 556778999999998843 2 3666654
No 179
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=52.04 E-value=19 Score=28.96 Aligned_cols=65 Identities=8% Similarity=-0.062 Sum_probs=46.8
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec-------CeeEEEEcCHHHHHHHhhc-C--CCCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG-------RDRIILVSGFKAVREVLTR-D--EFDG 695 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-------~~~~vv~~~~~~~~e~~~~-~--~f~~ 695 (711)
.+.+..--+||||+.-. ..+.+.++..+||+|..+++- +.=.|...+.+.++.++.. + .+.+
T Consensus 11 ~~~~~~~l~V~nlp~~~--------t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 82 (103)
T 2cq3_A 11 SKSTPKRLHVSNIPFRF--------RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEG 82 (103)
T ss_dssp CSCCCCEEEEESCCTTC--------CHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred CCCCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 34444567899998642 235677888999999999884 3457888999999999853 3 3666
Q ss_pred CCC
Q psy14413 696 RPS 698 (711)
Q Consensus 696 r~~ 698 (711)
|+-
T Consensus 83 ~~l 85 (103)
T 2cq3_A 83 RKI 85 (103)
T ss_dssp EEC
T ss_pred EEE
Confidence 654
No 180
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=51.94 E-value=17 Score=29.77 Aligned_cols=59 Identities=15% Similarity=0.091 Sum_probs=43.7
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc-C--CCCCCCCc
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR-D--EFDGRPSG 699 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~-~--~f~~r~~~ 699 (711)
-+||||+.-. ..+.+.++..+||+|..+++- +.=.|-..+.+.+..++.. + .+.+|+-.
T Consensus 29 l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~ 99 (110)
T 1oo0_B 29 LFVTSIHEEA--------QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQ 99 (110)
T ss_dssp EEEESCCTTC--------CHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHHHTTCEETTEECE
T ss_pred EEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHcCCCEECCcEEE
Confidence 6789998642 235677888999999999984 3457888999999999853 3 46666543
No 181
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=51.54 E-value=20 Score=28.71 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=42.3
Q ss_pred cccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec----CeeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 634 VVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG----RDRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 634 ~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g----~~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
+||||+.-. ..+.+.++..+||+|..+.+- +.=.|-..+.+.+..++.. ..+.+|+-.
T Consensus 4 ~V~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l~ 68 (101)
T 2hvz_A 4 YVGNLGTGA--------GKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVR 68 (101)
T ss_dssp EEECCCSSC--------SHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSCCCE
T ss_pred EEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCcEEE
Confidence 578887531 235677888999999999874 3567888999999998843 457777643
No 182
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=51.53 E-value=28 Score=28.66 Aligned_cols=69 Identities=13% Similarity=0.016 Sum_probs=49.9
Q ss_pred CCCCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc---C--CCCC
Q psy14413 624 LNVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR---D--EFDG 695 (711)
Q Consensus 624 ~~ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~---~--~f~~ 695 (711)
.+-|-|..--+||||+.=. --+.|.++..+||+|..+++- +.=.|-..+.+.+..++.. + .+.+
T Consensus 10 ~~~~~~~~~LfV~nLp~~v--------te~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~~l~~~~~~l~G 81 (105)
T 1sjq_A 10 HGSGVPSRVIHIRKLPIDV--------TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRG 81 (105)
T ss_dssp --CCCCCCEEEECSCCTTS--------CHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTSCCEETT
T ss_pred cCCCCCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHHhccCCceECC
Confidence 3455566678899998742 235678899999999999985 3568889999999998852 2 3777
Q ss_pred CCCcc
Q psy14413 696 RPSGY 700 (711)
Q Consensus 696 r~~~~ 700 (711)
|+-..
T Consensus 82 r~l~V 86 (105)
T 1sjq_A 82 QPIYI 86 (105)
T ss_dssp EECCB
T ss_pred EEEEE
Confidence 76543
No 183
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=50.67 E-value=26 Score=29.52 Aligned_cols=64 Identities=14% Similarity=0.067 Sum_probs=47.6
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc-----CCCCCCCCcc
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR-----DEFDGRPSGY 700 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~-----~~f~~r~~~~ 700 (711)
|...-+||||+.=. .-+.|.++..+||+|..+++- +.=.|-..+.+.+..++.. -.+.+|+-..
T Consensus 30 ps~~LfVgNLp~~v--------te~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~~l~~~~~~l~Gr~l~V 101 (119)
T 2ad9_A 30 PSRVIHIRKLPIDV--------TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYI 101 (119)
T ss_dssp CCSEEEEESCCTTC--------CHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHHHHHHHCCCBTTBCCEE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhccCCceECCeEEEE
Confidence 44567899998742 235678899999999999885 3567888899999888842 2588887644
No 184
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=50.07 E-value=15 Score=28.47 Aligned_cols=62 Identities=21% Similarity=0.225 Sum_probs=44.7
Q ss_pred CCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcCC--CCCC
Q psy14413 628 GPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRDE--FDGR 696 (711)
Q Consensus 628 gp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~~--f~~r 696 (711)
.+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++..+. +.+|
T Consensus 9 ~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~~g~ 80 (87)
T 3s7r_A 9 EDAGKMFVGGLSWDT--------SKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGR 80 (87)
T ss_dssp SCTTEEEEECCCTTC--------CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSSCEEETTE
T ss_pred CCCCEEEEeCCCCCC--------CHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhCCCEECCE
Confidence 344467889998642 2456778889999999998731 34678889999999996542 5555
Q ss_pred C
Q psy14413 697 P 697 (711)
Q Consensus 697 ~ 697 (711)
+
T Consensus 81 ~ 81 (87)
T 3s7r_A 81 V 81 (87)
T ss_dssp E
T ss_pred E
Confidence 4
No 185
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=49.91 E-value=25 Score=27.70 Aligned_cols=67 Identities=21% Similarity=0.274 Sum_probs=47.9
Q ss_pred CCCCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec------C---eeEEEEcCHHHHHHHhhc-C--
Q psy14413 624 LNVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG------R---DRIILVSGFKAVREVLTR-D-- 691 (711)
Q Consensus 624 ~~ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g------~---~~~vv~~~~~~~~e~~~~-~-- 691 (711)
+..|.|...-+||||+.-. ..+.+.++.++||+|..+.+- . .=.|-..+.+.++.++.. +
T Consensus 9 ~~~~~~~~~l~v~nlp~~~--------t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~ 80 (95)
T 2cqc_A 9 RANPDPNCCLGVFGLSLYT--------TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGM 80 (95)
T ss_dssp CCSCCGGGCEEEESCCSSC--------CHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTE
T ss_pred CCCCCCCCEEEEECCCCCC--------CHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHHhCCC
Confidence 3455566678899998642 235677888999999999883 2 346788999999999854 3
Q ss_pred CCCCCCC
Q psy14413 692 EFDGRPS 698 (711)
Q Consensus 692 ~f~~r~~ 698 (711)
.+.+|+-
T Consensus 81 ~~~g~~l 87 (95)
T 2cqc_A 81 ELDGRRI 87 (95)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 3666643
No 186
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=49.08 E-value=23 Score=29.74 Aligned_cols=61 Identities=15% Similarity=0.208 Sum_probs=45.1
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
.-+||||+.-. ..+.+.++..+||+|..+.+- +.=.|...+.+.+..++.. ..+.+|+-.
T Consensus 24 ~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l~ 95 (126)
T 3ex7_B 24 ILFVTGVHEEA--------TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPIS 95 (126)
T ss_dssp EEEEESCCTTC--------CHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSSBCE
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCeEEE
Confidence 46789998642 235677888999999999883 3457889999999999843 347777644
Q ss_pred c
Q psy14413 700 Y 700 (711)
Q Consensus 700 ~ 700 (711)
.
T Consensus 96 v 96 (126)
T 3ex7_B 96 V 96 (126)
T ss_dssp E
T ss_pred E
Confidence 3
No 187
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=48.95 E-value=16 Score=30.61 Aligned_cols=75 Identities=7% Similarity=-0.086 Sum_probs=52.0
Q ss_pred CCCCCCCccccchhhhhhhhhh--cchHHHHHHHHHHHcCCeeEEeec-----CeeEEEEcCHHHHHHHhh---cCCCCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSK--FKYHYLVCENYARRYGPITGLRLG-----RDRIILVSGFKAVREVLT---RDEFDG 695 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~--~~~~~~~~~~~~~~yg~v~~~~~g-----~~~~vv~~~~~~~~e~~~---~~~f~~ 695 (711)
||-|...-++-|+.....+... ...+.+-+.+...+||+|..+++- +.-.|-..+.+.++.++. +..|.+
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 6777778888888876432110 134455667777899999999983 344677788888888873 346999
Q ss_pred CCCcc
Q psy14413 696 RPSGY 700 (711)
Q Consensus 696 r~~~~ 700 (711)
|+-..
T Consensus 83 R~i~v 87 (114)
T 3s6e_A 83 KMITA 87 (114)
T ss_dssp EECEE
T ss_pred EEEEE
Confidence 97654
No 188
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=48.87 E-value=52 Score=27.93 Aligned_cols=66 Identities=11% Similarity=0.047 Sum_probs=46.2
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec------CeeEEEEcCHHHHHHHhhc---CCCCCCCCcc
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG------RDRIILVSGFKAVREVLTR---DEFDGRPSGY 700 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g------~~~~vv~~~~~~~~e~~~~---~~f~~r~~~~ 700 (711)
.--+||||+.-.. ...+-+.|.++..+||+|..+.+- +.=.|...+.+.+..++.. ..+.+|+-..
T Consensus 30 ~~LfV~nL~~~~~----e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~lng~~l~gr~l~V 104 (127)
T 2a3j_A 30 QVVLITNINPEVP----KEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEAFQGYPFQGNPLVI 104 (127)
T ss_dssp SEEEEESCCTTSC----HHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHHSTTCCCTTSCCEE
T ss_pred CEEEEeCCCCCCC----HHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHHHCCCEeCCCEEEE
Confidence 3578899986311 022333566788999999998883 2457888999999999843 3588887543
No 189
>3p5t_L Cleavage and polyadenylation specificity factor S; RRM domain, poly(A) site recognition, RNA, nuclear, RNA BIND protein; 2.70A {Homo sapiens} PDB: 3p6y_C
Probab=48.43 E-value=12 Score=29.38 Aligned_cols=59 Identities=10% Similarity=0.120 Sum_probs=41.4
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcC--CeeEEeecC---------eeEEEEcCHHHHHHHhh---cCCCCCCCC
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYG--PITGLRLGR---------DRIILVSGFKAVREVLT---RDEFDGRPS 698 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg--~v~~~~~g~---------~~~vv~~~~~~~~e~~~---~~~f~~r~~ 698 (711)
-+||||+.-. ..+.+.++..+|| +|..+++-. .=.|-..+.+.++.++. +..+.+|+-
T Consensus 4 l~V~nL~~~~--------t~~~l~~~F~~~G~~~v~~v~i~~~~~~g~~kG~afV~f~~~~~a~~Ai~~l~g~~~~gr~i 75 (90)
T 3p5t_L 4 LYIGNLTWWT--------TDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNP 75 (90)
T ss_dssp CEEESCCTTC--------CHHHHHHHHHTTTCCCCCCEEEEECTTTCCEEEEEEECC-CHHHHHHHHHHGGGSCSSSCCC
T ss_pred EEEeCCCCCC--------CHHHHHHHHHHhCCCceEEEEEEecCCCCccCcEEEEEECCHHHHHHHHHHcCCCeeCCEEE
Confidence 4678887632 2356778889999 898887632 24677889999988883 346888875
Q ss_pred c
Q psy14413 699 G 699 (711)
Q Consensus 699 ~ 699 (711)
.
T Consensus 76 ~ 76 (90)
T 3p5t_L 76 V 76 (90)
T ss_dssp E
T ss_pred E
Confidence 3
No 190
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=48.31 E-value=19 Score=28.69 Aligned_cols=62 Identities=5% Similarity=-0.101 Sum_probs=45.1
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---eeEEEEcCHHHHHHHhhc-C--CCCCCCCc
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---DRIILVSGFKAVREVLTR-D--EFDGRPSG 699 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---~~~vv~~~~~~~~e~~~~-~--~f~~r~~~ 699 (711)
..|-++|||..=. --..+.++..+||+|..+++.. .=.|-..+.+.+..+.+. | ++.+|+..
T Consensus 7 ~~wL~VgNL~~~~--------te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~~Ln~~~l~gr~I~ 74 (89)
T 2wbr_A 7 SSWLLLKNLTAQI--------DGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMALNNCVLANTTIF 74 (89)
T ss_dssp CCEEEEECCCTTC--------CCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cceEEEeCCCccC--------CHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHHHhcCCEECCcEEE
Confidence 3588899998742 1257889999999999999854 457777888777777743 2 46666543
No 191
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.25 E-value=19 Score=28.74 Aligned_cols=64 Identities=9% Similarity=0.099 Sum_probs=47.1
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCee-EEeecC---------eeEEEEcCHHHHHHHhhc-C--C
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPIT-GLRLGR---------DRIILVSGFKAVREVLTR-D--E 692 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~-~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~ 692 (711)
++.|..--+||||+.-. ..+.+.++..+||+|. .+++-. .=.|-..+.+.++.++.. + .
T Consensus 5 ~~~~~~~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~ 76 (99)
T 2div_A 5 SSGMAASLWMGDLEPYM--------DENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 76 (99)
T ss_dssp CCSSSSEEEECSCCTTC--------CHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHTTTTSE
T ss_pred CCCCccEEEEeCCCCCC--------CHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHHHcCCc
Confidence 44556677899998642 2356778889999999 887742 346788999999999954 3 4
Q ss_pred CCCCC
Q psy14413 693 FDGRP 697 (711)
Q Consensus 693 f~~r~ 697 (711)
+.+|+
T Consensus 77 ~~g~~ 81 (99)
T 2div_A 77 LPGAT 81 (99)
T ss_dssp ESSCS
T ss_pred cCCCC
Confidence 77877
No 192
>2e44_A Insulin-like growth factor 2 mRNA binding protein 3; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.20 E-value=48 Score=25.99 Aligned_cols=61 Identities=11% Similarity=0.110 Sum_probs=43.9
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEe-ecCe-----eEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLR-LGRD-----RIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~-~g~~-----~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
.--+||||+.-. ..+.+.++..+||+|..+. +-.. -.|-..+.+.++.++.. ..+.+|+-.
T Consensus 16 ~~l~V~nlp~~~--------t~~~l~~~F~~~G~v~~~~~i~~~~~~~~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~ 85 (96)
T 2e44_A 16 RKLQIRNIPPHL--------QWEVLDSLLVQYGVVESCEQVNTDSETAVVNVTYSSKDQARQALDKLNGFQLENFTLK 85 (96)
T ss_dssp CCEEEEEECSSS--------CHHHHHHHHHHHSCEEEEEEECCSSSSEEEEEEESSHHHHHHHHHHHTTCBCSSCBCE
T ss_pred CEEEEEcCCCCC--------CHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEECCHHHHHHHHHHhCCCEECCcEEE
Confidence 357789998632 2456788889999999984 4322 57888999999998843 357777643
No 193
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.13 E-value=29 Score=27.05 Aligned_cols=66 Identities=8% Similarity=0.072 Sum_probs=46.8
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC-eeEEEEcCHHHHHHHhhc-C--CCCCCCCcc
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR-DRIILVSGFKAVREVLTR-D--EFDGRPSGY 700 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-~~~vv~~~~~~~~e~~~~-~--~f~~r~~~~ 700 (711)
+.|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.+..++.. + .+.+|+-..
T Consensus 5 ~~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~v 74 (90)
T 2dnq_A 5 SSGMVKLFIGNLPREA--------TEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKLHGVNINV 74 (90)
T ss_dssp SSCCEEEEEESCCSSC--------CHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHHHTTCBCSSCBCEE
T ss_pred CCCCeEEEEeCCCCCC--------CHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHHhcCCccCCcEEEE
Confidence 3444467889998642 2356788889999999888743 556778899999998843 3 477776433
No 194
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=48.11 E-value=17 Score=29.03 Aligned_cols=62 Identities=19% Similarity=0.061 Sum_probs=45.2
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDGR 696 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r 696 (711)
|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+.+|
T Consensus 7 ~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 78 (99)
T 1whw_A 7 GSGRLFVRNLSYTS--------SEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGR 78 (99)
T ss_dssp SCEEEEEECCCTTC--------CHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSC
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 34457889998632 2356778889999999999843 457888999999999943 3 36666
Q ss_pred CC
Q psy14413 697 PS 698 (711)
Q Consensus 697 ~~ 698 (711)
+-
T Consensus 79 ~l 80 (99)
T 1whw_A 79 ML 80 (99)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 195
>2i2y_A Fusion protein consists of immunoglobin G- binding protein G and splicing factor,...; protein-RNA complex RRM alpha-beta sandwich BETA1-alpha1- BETA2-BETA3-alpha2-BETA4; NMR {Streptococcus SP} PDB: 2i38_A
Probab=47.94 E-value=33 Score=29.89 Aligned_cols=66 Identities=11% Similarity=0.029 Sum_probs=48.1
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec----CeeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG----RDRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g----~~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
+.+..--+||||+.-. ..+.+.++..+||+|..+++- +.=.|-..+.+.+..++.. ..+.+|+-.
T Consensus 70 ~~~~~~l~V~nl~~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l~ 141 (150)
T 2i2y_A 70 CPLDCKVYVGNLGNNG--------NKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVR 141 (150)
T ss_dssp STTSCEEEEESCCSCC--------SCHHHHHHHHHHSCEEEEEECSSSCSEEEEEESSHHHHHHHHHHHSSSCSSSSCCE
T ss_pred CCCCCEEEEeCCCCCC--------CHHHHHHHHHhhCCEEEEEEeeCCCcEEEEEECCHHHHHHHHHHcCCCEECCeEEE
Confidence 3444567899998642 124577888999999999984 3567888999999999843 358888754
Q ss_pred c
Q psy14413 700 Y 700 (711)
Q Consensus 700 ~ 700 (711)
.
T Consensus 142 v 142 (150)
T 2i2y_A 142 V 142 (150)
T ss_dssp E
T ss_pred E
Confidence 3
No 196
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.89 E-value=25 Score=28.06 Aligned_cols=63 Identities=10% Similarity=-0.025 Sum_probs=45.8
Q ss_pred CCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC--------eeEEEEcCHHHHHHHhhc-C--CCCCC
Q psy14413 628 GPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR--------DRIILVSGFKAVREVLTR-D--EFDGR 696 (711)
Q Consensus 628 gp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~--------~~~vv~~~~~~~~e~~~~-~--~f~~r 696 (711)
-+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+.+|
T Consensus 15 ~~~~~l~v~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 86 (100)
T 2do4_A 15 LEKHKLFISGLPFSC--------TKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKEN 86 (100)
T ss_dssp CCCSCEEEESCCTTC--------CHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHHTTEESSSC
T ss_pred CCCCEEEEeCCCCCC--------CHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 344467889998642 2356778889999999998842 457888999999999843 3 47776
Q ss_pred CC
Q psy14413 697 PS 698 (711)
Q Consensus 697 ~~ 698 (711)
+-
T Consensus 87 ~l 88 (100)
T 2do4_A 87 II 88 (100)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 197
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.66 E-value=25 Score=28.22 Aligned_cols=62 Identities=13% Similarity=0.084 Sum_probs=45.7
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFDGRPS 698 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~~r~~ 698 (711)
.--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.++.++.. ..+.+|+-
T Consensus 14 ~~l~V~nLp~~~--------t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l 85 (103)
T 2dnm_A 14 ITLKVDNLTYRT--------SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGREL 85 (103)
T ss_dssp CEEEEESCCTTC--------CHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBTTBCC
T ss_pred eEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEECCcEE
Confidence 357789998642 2356778889999999998842 457888999999998853 35777765
Q ss_pred cc
Q psy14413 699 GY 700 (711)
Q Consensus 699 ~~ 700 (711)
..
T Consensus 86 ~V 87 (103)
T 2dnm_A 86 RV 87 (103)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 198
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=47.38 E-value=22 Score=27.92 Aligned_cols=55 Identities=11% Similarity=0.023 Sum_probs=40.2
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec----CeeEEEEcCHHHHHHHh
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG----RDRIILVSGFKAVREVL 688 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g----~~~~vv~~~~~~~~e~~ 688 (711)
++-|...-++|||+.=. -.+.+.++..+||+|..+++- +.=.|-..+.+.++++.
T Consensus 7 ~~~~~~~l~V~~Lp~~~--------te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~~ 65 (89)
T 3d2w_A 7 HHHHGSKVFVGRCTEDM--------TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSLC 65 (89)
T ss_dssp ----CCEEEEESCCTTC--------CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHHT
T ss_pred CCCCCCEEEEeCCCCCC--------CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHHc
Confidence 44555678899998742 245678888999999999985 46678899999998644
No 199
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=45.54 E-value=49 Score=26.56 Aligned_cols=62 Identities=10% Similarity=0.058 Sum_probs=45.4
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecCe----------eEEEEcCHHHHHHHhhc----CCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRD----------RIILVSGFKAVREVLTR----DEFDG 695 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~~----------~~vv~~~~~~~~e~~~~----~~f~~ 695 (711)
..--+||||+.-. ..+.+.++..+||+|..+++-.. =.|-..+.+.+..++.. ..+.+
T Consensus 15 ~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~~g 86 (107)
T 2cph_A 15 TSKILVRNIPFQA--------NQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYG 86 (107)
T ss_dssp CCCEEEESCCTTC--------CHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSS
T ss_pred CCEEEEeCCCCcC--------CHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHHhccCCeECC
Confidence 3456789998642 23567788899999999998543 47888999999998843 34777
Q ss_pred CCCc
Q psy14413 696 RPSG 699 (711)
Q Consensus 696 r~~~ 699 (711)
|+-.
T Consensus 87 ~~l~ 90 (107)
T 2cph_A 87 RRLV 90 (107)
T ss_dssp CBCE
T ss_pred CEEE
Confidence 7543
No 200
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=45.49 E-value=17 Score=32.43 Aligned_cols=60 Identities=15% Similarity=0.084 Sum_probs=44.3
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc-C--CCCCCCCcc
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR-D--EFDGRPSGY 700 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~-~--~f~~r~~~~ 700 (711)
-+||||+.-. ....|.++..+||+|..+.+- +.=+|-..+.+.++.++.. + .+.+|+...
T Consensus 75 l~V~nLp~~~--------t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V 146 (165)
T 1rk8_A 75 LFVTSIHEEA--------QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQV 146 (165)
T ss_dssp EEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred EEEeCCCCCC--------CHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 7789998632 245678888999999998884 2457888999999998843 3 477765443
No 201
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.17 E-value=38 Score=26.47 Aligned_cols=64 Identities=11% Similarity=0.028 Sum_probs=46.1
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f 693 (711)
++.|...-+||||+.-. ..+.+.++.++||+|..+++-. .-.|-..+.+.++.++.. + .+
T Consensus 12 ~~~~~~~l~V~nlp~~~--------t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 83 (94)
T 2e5h_A 12 LAPSKSTVYVSNLPFSL--------TNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAINNKQL 83 (94)
T ss_dssp CCCCTTSEEEESCCTTS--------CHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHHTTTEEE
T ss_pred CCCCCCEEEEECCCCCC--------CHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHHcCCCee
Confidence 34444567899998632 2356778889999999999843 457889999999999953 3 36
Q ss_pred CCCC
Q psy14413 694 DGRP 697 (711)
Q Consensus 694 ~~r~ 697 (711)
.+|+
T Consensus 84 ~g~~ 87 (94)
T 2e5h_A 84 FGRV 87 (94)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 5654
No 202
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=45.10 E-value=30 Score=28.30 Aligned_cols=61 Identities=20% Similarity=0.165 Sum_probs=44.9
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
--+||||+.-. ..+.+.++..+||+|..+.+- +.-.|-..+.+.+..++.. ..+.+|+-.
T Consensus 28 ~l~V~nLp~~~--------te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~i~g~~l~ 99 (108)
T 2jrs_A 28 RLYVGSLHFNI--------TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMK 99 (108)
T ss_dssp EEEEECCCSSC--------CHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHHHHTTCCSSSSCCE
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 57789997632 235677888999999998874 2457888999999999843 357787754
Q ss_pred c
Q psy14413 700 Y 700 (711)
Q Consensus 700 ~ 700 (711)
.
T Consensus 100 V 100 (108)
T 2jrs_A 100 V 100 (108)
T ss_dssp E
T ss_pred E
Confidence 3
No 203
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=45.01 E-value=23 Score=28.15 Aligned_cols=65 Identities=8% Similarity=-0.011 Sum_probs=44.5
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec------CeeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG------RDRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g------~~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
..--+||||+.-.. ...+...+.++..+||+|..+++- +.=.|-..+.+.++.++.. + .+.+|+-
T Consensus 9 ~~~l~V~nL~~~~~----~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~gr~l 82 (96)
T 2dgx_A 9 GADVQVSNIDYRLS----RKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKI 82 (96)
T ss_dssp CEEEEEESCCTTSC----HHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred CCEEEEECCCCCCC----HHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHHhCCCEECCeEE
Confidence 33578899986421 022333344888999999999985 3457888999999999853 3 3666653
No 204
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.89 E-value=42 Score=26.58 Aligned_cols=64 Identities=14% Similarity=0.106 Sum_probs=46.4
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRP 697 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~ 697 (711)
|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++..+ .+.+|+
T Consensus 9 ~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~~ 80 (99)
T 2dgs_A 9 KSNKIFVGGIPHNC--------GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKK 80 (99)
T ss_dssp SCCEEEEESCCSSC--------CHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSCB
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCeE
Confidence 33457789998642 2356778889999999999842 4578889999999999533 477776
Q ss_pred Ccc
Q psy14413 698 SGY 700 (711)
Q Consensus 698 ~~~ 700 (711)
-..
T Consensus 81 l~V 83 (99)
T 2dgs_A 81 VEV 83 (99)
T ss_dssp CEE
T ss_pred EEE
Confidence 443
No 205
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=44.81 E-value=18 Score=27.86 Aligned_cols=63 Identities=10% Similarity=-0.050 Sum_probs=44.6
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCC
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFD 694 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~ 694 (711)
+.|..--+||||+.-. ..+.+.++..+||+|..+.+-. .-.|-..+.+.++.++.. ..+.
T Consensus 2 ~~~~~~l~v~nlp~~~--------t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 73 (85)
T 1x4e_A 2 SSGSSGLYIRGLQPGT--------TDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQ 73 (85)
T ss_dssp CCCCCEEEEESCCTTC--------CHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred CCCCcEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHHhcCCeEe
Confidence 4455567889997642 2345777888999999998743 357888999999998843 3455
Q ss_pred CCC
Q psy14413 695 GRP 697 (711)
Q Consensus 695 ~r~ 697 (711)
+|.
T Consensus 74 g~~ 76 (85)
T 1x4e_A 74 AQM 76 (85)
T ss_dssp EES
T ss_pred eEE
Confidence 554
No 206
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=44.77 E-value=19 Score=28.83 Aligned_cols=65 Identities=15% Similarity=0.162 Sum_probs=44.3
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeE--------EeecC---------eeEEEEcCHHHHHHHh
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITG--------LRLGR---------DRIILVSGFKAVREVL 688 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~--------~~~g~---------~~~vv~~~~~~~~e~~ 688 (711)
+|-|..--+||||+.-. -.+.+.++..+||+|.. +++-. .=.|...+.+.++.++
T Consensus 9 ~~~~~~~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai 80 (99)
T 2la6_A 9 SHSDNNTIFVQGLGENV--------TIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAI 80 (99)
T ss_dssp SCCCCSEEEEECCCSSC--------CHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCC--------CHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHH
Confidence 33333456789998642 23567788899999987 65532 3467788999999988
Q ss_pred hc---CCCCCCCC
Q psy14413 689 TR---DEFDGRPS 698 (711)
Q Consensus 689 ~~---~~f~~r~~ 698 (711)
.. ..+.+|+-
T Consensus 81 ~~l~g~~~~g~~l 93 (99)
T 2la6_A 81 DWFDGKEFSGNPI 93 (99)
T ss_dssp HHHTTCBSSSSBC
T ss_pred HHhCCCEeCCcEE
Confidence 43 34777754
No 207
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=44.77 E-value=42 Score=27.23 Aligned_cols=56 Identities=11% Similarity=0.070 Sum_probs=42.8
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec--CeeEEEEcCHHHHHHHhhc-C--CCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG--RDRIILVSGFKAVREVLTR-D--EFDG 695 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g--~~~~vv~~~~~~~~e~~~~-~--~f~~ 695 (711)
--+||||+.-. ..+.|.++..+||+|..+.+- +.=.|...+.+.++.++.. + .+.+
T Consensus 17 ~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 77 (108)
T 1x4c_A 17 RVVVSGLPPSG--------SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 77 (108)
T ss_dssp EEEEESCCSSC--------CHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHHSSSEEEEC
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHHHCcCCccC
Confidence 46789998632 246778899999999999885 3678888999999999853 3 3655
No 208
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.57 E-value=54 Score=24.95 Aligned_cols=60 Identities=15% Similarity=0.070 Sum_probs=44.3
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---eeEEEEcCHHHHHHHhhc--C--CCCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---DRIILVSGFKAVREVLTR--D--EFDGRP 697 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---~~~vv~~~~~~~~e~~~~--~--~f~~r~ 697 (711)
..--+||||+.-. ..+.+.++..+||+|..+.+-. .-.|-..+.+.+..++.. + .+.+|+
T Consensus 12 ~~~l~V~~l~~~~--------t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~l~~~~~~~g~~ 78 (85)
T 2ytc_A 12 ITTLYVGGLGDTI--------TETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRR 78 (85)
T ss_dssp CCCEEEECCTTTS--------CHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHTTTTTCEETTEE
T ss_pred ccEEEEcCCCCCC--------CHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHHhcCCeeECCCE
Confidence 3457789998642 2356778889999999998853 567888999999999863 2 366654
No 209
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=44.31 E-value=23 Score=28.11 Aligned_cols=61 Identities=11% Similarity=0.081 Sum_probs=43.3
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc---CCCCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR---DEFDGRP 697 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~---~~f~~r~ 697 (711)
..--+||||+.-. ..+.+.++..+||+|..+.+- +.=.|-..+.+.+..++.. ..+.+|+
T Consensus 2 ~~~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 73 (96)
T 2x1f_A 2 SRVVYLGSIPYDQ--------TEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLNGYQLGSRF 73 (96)
T ss_dssp CSEEEEESCCTTC--------CHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred CcEEEEECCCCCC--------CHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHHhCCCeECCeE
Confidence 3445788887531 235677888999999999983 3457888999999999843 2366654
Q ss_pred C
Q psy14413 698 S 698 (711)
Q Consensus 698 ~ 698 (711)
-
T Consensus 74 l 74 (96)
T 2x1f_A 74 L 74 (96)
T ss_dssp C
T ss_pred E
Confidence 3
No 210
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=44.01 E-value=21 Score=30.07 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=49.2
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC-------------eeEEEEcCHHHHHHHhhc---CC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR-------------DRIILVSGFKAVREVLTR---DE 692 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-------------~~~vv~~~~~~~~e~~~~---~~ 692 (711)
|...-++.|+..-..+. ....+-+.+...+||+|..+++-. .-.|-..+++.++.++.. ..
T Consensus 19 ps~vl~L~Nm~~~~el~---ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~ 95 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDID---DDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRW 95 (118)
T ss_dssp SCCEEEEESCSCGGGCC---TTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCE
T ss_pred CCCEEEEECCCCHHHHH---HHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCE
Confidence 56678889997653322 335567778888999999998743 235667799988888743 46
Q ss_pred CCCCCCcc
Q psy14413 693 FDGRPSGY 700 (711)
Q Consensus 693 f~~r~~~~ 700 (711)
|.+|+-..
T Consensus 96 f~GR~i~v 103 (118)
T 3ue2_A 96 FAGRKVVA 103 (118)
T ss_dssp ETTEECEE
T ss_pred ECCcEEEE
Confidence 99997654
No 211
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=43.60 E-value=31 Score=27.97 Aligned_cols=67 Identities=13% Similarity=0.098 Sum_probs=47.0
Q ss_pred CCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec-------CeeEEEEcCHHHHHHHhhc-C--CCCCC
Q psy14413 628 GPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG-------RDRIILVSGFKAVREVLTR-D--EFDGR 696 (711)
Q Consensus 628 gp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-------~~~~vv~~~~~~~~e~~~~-~--~f~~r 696 (711)
++..--+||||+.-.. .+.....+.+.++..+||+|..+++- +.=.|...+.+.++.++.. + .|.+|
T Consensus 13 ~~~~~l~V~nLp~~~~--~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~~g~ 89 (105)
T 2nlw_A 13 GIDSVIVVDNVPQVGP--DRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQ 89 (105)
T ss_dssp SCCSEEEEESCCCCCT--TTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEECSTT
T ss_pred CCCCEEEEeCCCcchh--hhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCcccCCC
Confidence 3344578999987420 00001346788888999999999985 3557888999999999854 3 48887
No 212
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=43.58 E-value=18 Score=27.67 Aligned_cols=57 Identities=11% Similarity=0.096 Sum_probs=41.0
Q ss_pred cccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCCCCCC
Q psy14413 634 VVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFDGRPS 698 (711)
Q Consensus 634 ~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~~r~~ 698 (711)
++|||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. ..+.+|+-
T Consensus 5 ~V~nlp~~~--------t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~l~g~~~~g~~l 73 (83)
T 3md1_A 5 FVGDLNVNV--------DDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 73 (83)
T ss_dssp EEECCCTTC--------CHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHHHTTCEETTEEC
T ss_pred EEeCCCCCC--------CHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHHhcCCeeCCcEE
Confidence 578886632 2356778889999999988742 347889999999999853 34666654
No 213
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=42.96 E-value=51 Score=26.41 Aligned_cols=63 Identities=10% Similarity=-0.029 Sum_probs=45.2
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC--------eeEEEEcCHHHHHHHhhc---CCCCC--
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR--------DRIILVSGFKAVREVLTR---DEFDG-- 695 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~--------~~~vv~~~~~~~~e~~~~---~~f~~-- 695 (711)
|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. ..+.+
T Consensus 14 ~~~~l~v~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gg~ 85 (105)
T 2dnh_A 14 RDRKLFVGMLNKQQ--------SEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGA 85 (105)
T ss_dssp CCCEEEEESCCTTC--------CHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHHHSSCCCCTTC
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHHHcCCccCCCC
Confidence 44567899998642 2356778889999999998853 446788999999999843 34666
Q ss_pred -CCCc
Q psy14413 696 -RPSG 699 (711)
Q Consensus 696 -r~~~ 699 (711)
|+-.
T Consensus 86 ~~~l~ 90 (105)
T 2dnh_A 86 SSSLV 90 (105)
T ss_dssp SSCCE
T ss_pred CccEE
Confidence 6543
No 214
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=42.60 E-value=52 Score=26.76 Aligned_cols=64 Identities=14% Similarity=0.075 Sum_probs=47.1
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc---C--CCCCCCCcc
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR---D--EFDGRPSGY 700 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~---~--~f~~r~~~~ 700 (711)
|...-+||||+.= -..+.|.++..+||+|..+.+- +.=.|-..+.+.+..++.. + .+.+|+-..
T Consensus 14 p~~~l~V~nLp~~--------~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~l~~~~~~i~Gr~l~V 85 (104)
T 1wex_A 14 VSPVVHVRGLCES--------VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCSEEEEESCCSS--------CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred CCCEEEEeCCCCC--------CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHhccCCceECCEEEEE
Confidence 4456889999863 1245678899999999999875 3567888999999988842 3 377877544
No 215
>1x4a_A Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)...; structure genomics, SURP domain, splicing factor SF2; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=42.14 E-value=52 Score=26.60 Aligned_cols=63 Identities=16% Similarity=0.147 Sum_probs=45.0
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC------eeEEEEcCHHHHHHHhhc-C--CCCCCCCc
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR------DRIILVSGFKAVREVLTR-D--EFDGRPSG 699 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~------~~~vv~~~~~~~~e~~~~-~--~f~~r~~~ 699 (711)
+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|...+.+.++.++.. + .+.+|+-.
T Consensus 21 ~~~~l~V~nLp~~~--------t~~~l~~~F~~~G~v~~~~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~ 92 (109)
T 1x4a_A 21 NDCRIYVGNLPPDI--------RTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLR 92 (109)
T ss_dssp CSSEEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEECCHHHHHHHHHHcCCCEECCeEEE
Confidence 33457789998642 2356788999999998888743 347889999999999833 2 36666543
No 216
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.30 E-value=31 Score=27.81 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=45.6
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCC
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDG 695 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~ 695 (711)
+.+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++..+ .+.+
T Consensus 13 ~~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~~g 84 (105)
T 2dh8_A 13 ADEIGKLFVGGLDWST--------TQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDG 84 (105)
T ss_dssp SSSSSEECCBSCCTTC--------CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEETT
T ss_pred CCCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeECC
Confidence 3444567899998642 2356778889999999988743 3468889999999999654 2666
Q ss_pred CC
Q psy14413 696 RP 697 (711)
Q Consensus 696 r~ 697 (711)
|+
T Consensus 85 ~~ 86 (105)
T 2dh8_A 85 RN 86 (105)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 217
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=41.29 E-value=28 Score=27.52 Aligned_cols=65 Identities=11% Similarity=0.128 Sum_probs=45.3
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec------CeeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG------RDRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g------~~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
..--+||||+.-.. ...+...|.++..+||+|..+.+- +.=.|-..+.+.+..++.. + .+.+|+-
T Consensus 8 ~~~l~V~nLp~~~~----~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l 81 (97)
T 1nu4_A 8 NHTIYINNLNEKIK----KDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPM 81 (97)
T ss_dssp CSEEEEESCCTTSC----HHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEEC
T ss_pred CCEEEEeCCCCCCC----HHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHHhCCCEECCcEE
Confidence 34567899986421 122334455889999999999875 4668889999999999853 2 3666653
No 218
>2lea_A Serine/arginine-rich splicing factor 2; SR protein, RNA binding protein; NMR {Homo sapiens} PDB: 2leb_A 2lec_A
Probab=41.23 E-value=44 Score=28.58 Aligned_cols=61 Identities=11% Similarity=0.087 Sum_probs=45.7
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.++.++.. ..+.+|+-.
T Consensus 49 ~l~V~nLp~~~--------te~~L~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~F~~~~~A~~Ai~~l~g~~i~g~~l~ 120 (135)
T 2lea_A 49 SLKVDNLTYRT--------SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELR 120 (135)
T ss_dssp CEEEECCCSSC--------HHHHHHHHHGGGSCCSEEECCCCSSSSSCCSCCEEECSCHHHHHHHHTTTTTCCSSSSCCE
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 46789998632 3456778889999999999854 347889999999999953 347777643
Q ss_pred c
Q psy14413 700 Y 700 (711)
Q Consensus 700 ~ 700 (711)
.
T Consensus 121 V 121 (135)
T 2lea_A 121 V 121 (135)
T ss_dssp E
T ss_pred E
Confidence 3
No 219
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=40.85 E-value=23 Score=27.46 Aligned_cols=58 Identities=22% Similarity=0.079 Sum_probs=41.6
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
-+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.-+ .+.+|+-
T Consensus 9 l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~~~~g~~l 77 (89)
T 3ucg_A 9 IYVGNVDYGA--------TAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQI 77 (89)
T ss_dssp EEEESCCTTC--------CHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTCEETTEEC
T ss_pred EEEeCCCCCC--------CHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCCEECCcEE
Confidence 4678887632 2356778889999999988743 3478889999999998333 3666654
No 220
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=40.69 E-value=25 Score=30.19 Aligned_cols=57 Identities=9% Similarity=0.034 Sum_probs=39.4
Q ss_pred CCCCCCCC--ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecCe-----eEEEEcCHHHHHHHhh
Q psy14413 625 NVPGPSWL--PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRD-----RIILVSGFKAVREVLT 689 (711)
Q Consensus 625 ~ppgp~~~--p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~~-----~~vv~~~~~~~~e~~~ 689 (711)
.+++|.+. -+||||..= --.+.|+++..+||+|-.+++..+ =.|...|.+.++.++.
T Consensus 21 ~~~~ps~VL~I~V~NL~~~--------vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 21 AMAGQSPVLRIIVENLFYP--------VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp ----CCSEEEEEEESCCSC--------CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred ccCCCCceEEEEECCCCCC--------CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 35555554 448999753 124578889999999999988643 5788888888888773
No 221
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.65 E-value=27 Score=28.04 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=43.3
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCCCCCc
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDGRPSG 699 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r~~~ 699 (711)
--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+.+|+-.
T Consensus 10 ~l~V~nlp~~~--------~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l~ 81 (104)
T 1p1t_A 10 SVFVGNIPYEA--------TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 81 (104)
T ss_dssp CEEEESCCTTS--------CHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBE
T ss_pred EEEEeCCCCcC--------CHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCcEEE
Confidence 46788887531 2356778889999999988742 346788999999999943 3 47777643
No 222
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=40.13 E-value=51 Score=26.46 Aligned_cols=65 Identities=9% Similarity=-0.006 Sum_probs=45.9
Q ss_pred CCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CC--
Q psy14413 628 GPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EF-- 693 (711)
Q Consensus 628 gp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f-- 693 (711)
.+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+
T Consensus 11 ~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~~ 82 (106)
T 2dgp_A 11 HDAIKLFIGQIPRNL--------DEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLP 82 (106)
T ss_dssp TTCEEEEEESCCTTC--------CHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHHHHTTTCCCT
T ss_pred CCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHhcCCcccC
Confidence 334457789998632 2356788899999999999843 457888899999999843 2 34
Q ss_pred -CCCCCcc
Q psy14413 694 -DGRPSGY 700 (711)
Q Consensus 694 -~~r~~~~ 700 (711)
.+|+-..
T Consensus 83 ~~g~~l~v 90 (106)
T 2dgp_A 83 GMNRPIQV 90 (106)
T ss_dssp TCSSCCEE
T ss_pred CCCceEEE
Confidence 5666443
No 223
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=40.09 E-value=29 Score=28.86 Aligned_cols=63 Identities=11% Similarity=0.081 Sum_probs=45.5
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC--------eeEEEEcCHHHHHHHhhc---CCCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR--------DRIILVSGFKAVREVLTR---DEFDGRP 697 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~--------~~~vv~~~~~~~~e~~~~---~~f~~r~ 697 (711)
+..--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.++.++.. ..+.+|+
T Consensus 6 ~~~~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~~ 77 (116)
T 2fy1_A 6 HPGKLFIGGLNRET--------NEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKA 77 (116)
T ss_dssp SCCEEEEECCTTTC--------CHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSSSB
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 34457789998632 2356778889999999988854 457888999999999853 2476665
Q ss_pred Cc
Q psy14413 698 SG 699 (711)
Q Consensus 698 ~~ 699 (711)
-.
T Consensus 78 l~ 79 (116)
T 2fy1_A 78 IK 79 (116)
T ss_dssp CE
T ss_pred EE
Confidence 43
No 224
>2kn4_A Immunoglobulin G-binding protein G, splicing FACT arginine/serine-rich 2, S35, splicing factor SC35,; RRM domain, cell WALL; NMR {Streptococcus SP}
Probab=40.03 E-value=34 Score=29.98 Aligned_cols=66 Identities=14% Similarity=0.097 Sum_probs=48.1
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecCe---------eEEEEcCHHHHHHHhhc-C--CC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRD---------RIILVSGFKAVREVLTR-D--EF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~~---------~~vv~~~~~~~~e~~~~-~--~f 693 (711)
.+.+..--+||||+.-. ..+.+.++..+||+|..+++-.. =.|-..+.+.+..++.. + .+
T Consensus 66 ~~~~~~~l~v~nl~~~~--------~~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~ 137 (158)
T 2kn4_A 66 DVEGMTSLKVDNLTYRT--------SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVL 137 (158)
T ss_dssp CCCBCCEEEEESCCTTC--------CHHHHHHHHHHHSCEEEEECCCCSSCTTSCCEEEEEESBHHHHHHHHHHSTTEES
T ss_pred CCCCCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEeecCCCCccceEEEEEECCHHHHHHHHHHhCCCEE
Confidence 33444567899998642 23567788899999999998543 47888999999999954 3 47
Q ss_pred CCCCCc
Q psy14413 694 DGRPSG 699 (711)
Q Consensus 694 ~~r~~~ 699 (711)
.+|+-.
T Consensus 138 ~g~~l~ 143 (158)
T 2kn4_A 138 DGRELR 143 (158)
T ss_dssp SSSEEE
T ss_pred CCeEEE
Confidence 777643
No 225
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=39.84 E-value=29 Score=26.69 Aligned_cols=59 Identities=14% Similarity=0.102 Sum_probs=42.4
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec----------CeeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG----------RDRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g----------~~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
--+||||+.-. ..+.+.++..+||+|..+.+- +.=.|...+.+.++.++.. + .+.+|+-
T Consensus 6 ~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 77 (88)
T 4a8x_A 6 KVHIGRLTRNV--------TKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI 77 (88)
T ss_dssp EEEEECCCTTC--------CHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHHHTTCEETTEEC
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHHcCCCeECCeEE
Confidence 35688887632 235677888999999998872 2447888999999999853 3 3666654
No 226
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=38.89 E-value=15 Score=30.09 Aligned_cols=71 Identities=8% Similarity=0.078 Sum_probs=47.4
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC----------eeEEEEcCHHHHHHHhhc---CCC
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR----------DRIILVSGFKAVREVLTR---DEF 693 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~----------~~~vv~~~~~~~~e~~~~---~~f 693 (711)
|-|...-+++|+..-..+. ....+-+.+...+||+|..+++-. .=.|-..+.+.+..+... ..|
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~---dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~ 81 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVD---EDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYF 81 (105)
T ss_dssp GSCCSEEEEESSSCSCCC------CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEEcCCChHHhh---HHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEE
Confidence 4456677788887431111 223466777888999999998742 235777898888888743 459
Q ss_pred CCCCCcc
Q psy14413 694 DGRPSGY 700 (711)
Q Consensus 694 ~~r~~~~ 700 (711)
.+|+-..
T Consensus 82 ~Gr~i~v 88 (105)
T 2pe8_A 82 GGRVVKA 88 (105)
T ss_dssp TTEECEE
T ss_pred CCcEEEE
Confidence 9987654
No 227
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=38.65 E-value=29 Score=28.44 Aligned_cols=62 Identities=15% Similarity=0.153 Sum_probs=44.0
Q ss_pred CCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCC
Q psy14413 628 GPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGR 696 (711)
Q Consensus 628 gp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r 696 (711)
.+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|...+.+.++.++... .+.+|
T Consensus 23 ~~~~~lfV~nLp~~~--------te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~~~~l~g~ 94 (109)
T 2rs2_A 23 SSGCKMFIGGLSWQT--------TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSK 94 (109)
T ss_dssp ---CCEEEESCCTTC--------CHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSSCEEETTE
T ss_pred CCCCEEEEeCCCCCC--------CHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHCCCcCCCE
Confidence 344457899998632 2356778889999999999843 3478899999999999653 35555
Q ss_pred C
Q psy14413 697 P 697 (711)
Q Consensus 697 ~ 697 (711)
+
T Consensus 95 ~ 95 (109)
T 2rs2_A 95 T 95 (109)
T ss_dssp E
T ss_pred E
Confidence 4
No 228
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=38.49 E-value=20 Score=29.77 Aligned_cols=59 Identities=17% Similarity=0.093 Sum_probs=45.0
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcC-CeeEEeec-----CeeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYG-PITGLRLG-----RDRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg-~v~~~~~g-----~~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
--+||||+.-. -.+.|.++..+|| +|..+.+- +.=.|-..+.+.++.++.+ + .+.+|+.
T Consensus 30 ~l~VgnLp~~~--------te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~lng~~l~Gr~i 97 (111)
T 2jvr_A 30 RITMKNLPEGC--------SWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGSVI 97 (111)
T ss_dssp EEEEECSSCCC--------CHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHHTTTEEETTEEE
T ss_pred EEEEECCCCCC--------CHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHHcCCCEECCeEE
Confidence 57789998742 2467888999999 89888883 4568888999999999854 3 4777753
No 229
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.38 E-value=36 Score=27.05 Aligned_cols=63 Identities=10% Similarity=-0.042 Sum_probs=45.7
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---eeEEEEcCHHHHHHHhhc---CCCCCCCCcc
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---DRIILVSGFKAVREVLTR---DEFDGRPSGY 700 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---~~~vv~~~~~~~~e~~~~---~~f~~r~~~~ 700 (711)
..--+||||+.-. ..+.+.++..+||+|..+++.. .=.|-..+.+.++.++.. ..+.+|+-..
T Consensus 15 ~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~l~g~~~~g~~l~v 83 (99)
T 2cpj_A 15 RSRLFVGNLPPDI--------TEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 83 (99)
T ss_dssp TTEEEEESCCTTC--------CHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEE
T ss_pred CCEEEEeCCCCCC--------CHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHHhCCCEeCCceEEE
Confidence 3457889998642 2356778889999999999864 557778899999888833 3577776543
No 230
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=38.08 E-value=28 Score=28.15 Aligned_cols=60 Identities=10% Similarity=0.036 Sum_probs=43.3
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec--------CeeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG--------RDRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g--------~~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
.--+||||+.-. ..+.+.++..+||+|..+.+- +.=.|-..+.+.++.++.. + .+.+|+-
T Consensus 30 ~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 100 (107)
T 3ulh_A 30 GKLLVSNLDFGV--------SDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPM 100 (107)
T ss_dssp EEEEEESCCTTC--------CHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHHTTCEETTEEC
T ss_pred CEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHHhCCCEeCCcEE
Confidence 357789998742 235677888999999988874 2447788899999999853 3 3666653
No 231
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.82 E-value=39 Score=27.44 Aligned_cols=61 Identities=10% Similarity=0.075 Sum_probs=44.5
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc---CCCCCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR---DEFDGRPS 698 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~---~~f~~r~~ 698 (711)
..--+||||+.-. -.+.+.++..+||+|..+.+- +.=.|-..+.+.+..++.. ..+.+|+-
T Consensus 25 ~~~l~V~nl~~~~--------t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 91 (109)
T 1x4g_A 25 NCTVYCGGIASGL--------TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVV 91 (109)
T ss_dssp CCEEEEECCSSCC--------CHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEETTEEC
T ss_pred CcEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHHcCCCEECCcEE
Confidence 3457889998631 235677888999999999984 4667888999999998843 23666543
No 232
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=37.82 E-value=47 Score=29.78 Aligned_cols=57 Identities=9% Similarity=0.037 Sum_probs=40.5
Q ss_pred CCCCCCC--ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC-----eeEEEEcCHHHHHHHhhc
Q psy14413 626 VPGPSWL--PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR-----DRIILVSGFKAVREVLTR 690 (711)
Q Consensus 626 ppgp~~~--p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-----~~~vv~~~~~~~~e~~~~ 690 (711)
+|.|... -+||||..= --.+.|.++..+||+|-.+++.. .=.|-..|.+.+.+++..
T Consensus 40 ~~~ps~vl~l~VgNL~~~--------vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 40 MAGQSPVLRIIVENLFYP--------VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp CCCCCCEEEEEECSCCSC--------CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred CCCCCceEEEEEeCcCCC--------CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 4444443 458999753 12457888999999999998842 457888898888888743
No 233
>2cpx_A Hypothetical protein FLJ11016; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.41 E-value=30 Score=28.43 Aligned_cols=67 Identities=9% Similarity=-0.050 Sum_probs=45.8
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCe----eEEeec-----CeeEEEEcCHHHHHHHhhc---CCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPI----TGLRLG-----RDRIILVSGFKAVREVLTR---DEF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v----~~~~~g-----~~~~vv~~~~~~~~e~~~~---~~f 693 (711)
++.|..--+||||+.-. ..+.+.++..+||+| +.+.+- +.=.|-..+.+.++.++.. ..+
T Consensus 21 ~~~~~~~l~V~nLp~~~--------t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 92 (115)
T 2cpx_A 21 PGEPNKVLYLKNLSPRV--------TERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKL 92 (115)
T ss_dssp CCSCCSEEEEECCCTTC--------CHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBC
T ss_pred CCCCCCEEEEeCCCCCC--------CHHHHHHHHHHhCCccceEEEEEcCCCccceEEEEEECCHHHHHHHHHHhCCCEe
Confidence 44455578899998632 235677788899988 555543 3457888999999999853 347
Q ss_pred CCCCCcc
Q psy14413 694 DGRPSGY 700 (711)
Q Consensus 694 ~~r~~~~ 700 (711)
.+|+-..
T Consensus 93 ~g~~l~v 99 (115)
T 2cpx_A 93 YGKILVI 99 (115)
T ss_dssp SSCBCEE
T ss_pred CCcEEEE
Confidence 7776443
No 234
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=37.26 E-value=25 Score=27.73 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=44.9
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC--------eeEEEEcCHHHHHHHhhc-C--CCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR--------DRIILVSGFKAVREVLTR-D--EFDGRP 697 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~--------~~~vv~~~~~~~~e~~~~-~--~f~~r~ 697 (711)
+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+.+|+
T Consensus 15 ~~~~l~v~nlp~~~--------~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 86 (95)
T 2ywk_A 15 ADRTVFVGNLEARV--------REEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGRP 86 (95)
T ss_dssp GGGEEEEECCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHHHTTCEETTEE
T ss_pred CCCEEEEECCCCCC--------CHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHHhCCCEECCCE
Confidence 33457789998642 2356778889999999998843 447888899999999853 3 466665
Q ss_pred C
Q psy14413 698 S 698 (711)
Q Consensus 698 ~ 698 (711)
-
T Consensus 87 l 87 (95)
T 2ywk_A 87 I 87 (95)
T ss_dssp C
T ss_pred E
Confidence 4
No 235
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=36.71 E-value=29 Score=31.97 Aligned_cols=60 Identities=2% Similarity=0.072 Sum_probs=45.5
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec--------CeeEEEEcCHHHHHHHhhcC--CCCCCCCcc
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG--------RDRIILVSGFKAVREVLTRD--EFDGRPSGY 700 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g--------~~~~vv~~~~~~~~e~~~~~--~f~~r~~~~ 700 (711)
-++|||+.- ...+.+.++..+||+|..+++- +.=.|-..+.+.++.++... .|.+|+-..
T Consensus 112 l~V~nLp~~--------~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~~~~~~Gr~l~V 181 (193)
T 2voo_A 112 VYIKGFPTD--------ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKETDLLI 181 (193)
T ss_dssp EEEECCCTT--------CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCTTCEETTEECEE
T ss_pred EEecCCCCc--------CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhCCCeECCEEEEE
Confidence 578998863 2346788899999999998873 35578889999999999543 478876544
No 236
>2e5j_A Methenyltetrahydrofolate synthetase domain containing; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.60 E-value=76 Score=24.92 Aligned_cols=60 Identities=12% Similarity=0.030 Sum_probs=41.1
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCe-eEEeec---CeeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPI-TGLRLG---RDRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v-~~~~~g---~~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
--+||||+.-. ..+.+.++..+||+| ..+..+ +.=.|-..+.+.+..++.. ..+.+|+-.
T Consensus 21 ~l~V~nL~~~~--------t~~~l~~~F~~~G~v~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l~ 87 (97)
T 2e5j_A 21 DVYVGNLPRDA--------RVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDTLR 87 (97)
T ss_dssp EEEEECCCTTC--------CHHHHHHHHHHTTCCCSEEEEETTTTEEEEECSSHHHHHHHHHHHTTCCSSSSCCE
T ss_pred EEEEeCCCCcC--------cHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEECCHHHHHHHHHHhCCCEECCcEEE
Confidence 46789998632 235677888999998 333322 3567788899999988843 357787643
No 237
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.23 E-value=61 Score=26.02 Aligned_cols=63 Identities=5% Similarity=-0.050 Sum_probs=45.7
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeE-Eeec--------CeeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITG-LRLG--------RDRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~-~~~g--------~~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
..--++|||+.-. ..+.+.++.++||+|.. +.+- +.=.|...+.+.++.++..+ .+.+|+.
T Consensus 15 ~~~l~V~nLp~~~--------te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr~i 86 (104)
T 1wg5_A 15 DGFVRLRGLPFGC--------SKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYI 86 (104)
T ss_dssp CCEEEEESCCTTC--------CHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSSCC
T ss_pred CCEEEEeCCCCCC--------CHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCcEE
Confidence 3456789998742 23567788889999875 6552 35688899999999999664 4888864
Q ss_pred cc
Q psy14413 699 GY 700 (711)
Q Consensus 699 ~~ 700 (711)
..
T Consensus 87 ~v 88 (104)
T 1wg5_A 87 EI 88 (104)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 238
>2ki2_A SS-DNA binding protein 12RNP2; HP0827, RRM, SS-DNA binding proteins, RNA binding protein/SS-DNA binding protein complex; NMR {Helicobacter pylori}
Probab=36.18 E-value=24 Score=27.49 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=40.7
Q ss_pred cccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCCCCCCcc
Q psy14413 634 VVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFDGRPSGY 700 (711)
Q Consensus 634 ~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~~r~~~~ 700 (711)
+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+ +.+++.. ..+.+|+-..
T Consensus 5 ~V~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~-a~~a~~~l~g~~~~g~~l~V 74 (90)
T 2ki2_A 5 YVGNLVYSA--------TSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEES-VSEAIAKLDNTDFMGRTIRV 74 (90)
T ss_dssp EEEEECTTS--------SHHHHTTTHHHHTCCSEEEECCCSSSCCCCEEEEEEECTTH-HHHHHHTSCSSCCSSSSCSE
T ss_pred EECCCCCCC--------CHHHHHHHHHhcCCEEEEEEEEcCCCCCcceEEEEEECCHH-HHHHHHHhCCCEECCeEEEE
Confidence 578887531 2345777888999999998842 3468889999 8888853 3477776543
No 239
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=36.10 E-value=28 Score=28.63 Aligned_cols=60 Identities=2% Similarity=-0.154 Sum_probs=43.4
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
.--+||||+.-. ..+.+.++..+||+|..+++-. .=+|-..+.+.++.++.. + .+.+|+-
T Consensus 26 ~~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 97 (115)
T 2cpz_A 26 ANLFIYHLPQEF--------GDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRL 97 (115)
T ss_dssp CCEEEESCCSSC--------CHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEEC
T ss_pred cEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHHcCCCEECCEEE
Confidence 357789998642 2356788889999999888743 346788999999999843 2 3666644
No 240
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.95 E-value=26 Score=28.96 Aligned_cols=60 Identities=18% Similarity=0.186 Sum_probs=43.9
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
.--+||||+.-. ..+.+.++..+||+|..+++-. .=.|...+.+.++.++..+ .+.+|+-
T Consensus 28 ~~l~V~nLp~~~--------te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~~~~~g~~l 98 (116)
T 1x4b_A 28 RKLFIGGLSFET--------TEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVV 98 (116)
T ss_dssp TEEEEECCTTCC--------CHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEETTEEE
T ss_pred CEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhCCcEECCEEE
Confidence 346789997632 2356778889999999988843 4568889999999999664 2666643
No 241
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=35.95 E-value=45 Score=27.19 Aligned_cols=72 Identities=10% Similarity=0.113 Sum_probs=47.8
Q ss_pred CCCccccchhhhhhhhhh--cchHHHHHHHHHHHcCCeeEEeecC-----------eeEEEEcCHHHHHHHhhc---CCC
Q psy14413 630 SWLPVVGCYLEFSRLLSK--FKYHYLVCENYARRYGPITGLRLGR-----------DRIILVSGFKAVREVLTR---DEF 693 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~--~~~~~~~~~~~~~~yg~v~~~~~g~-----------~~~vv~~~~~~~~e~~~~---~~f 693 (711)
...-++-|+.....+... .....+-+.+...+||+|..+++-. .=.|-..+++.++.++.. ..|
T Consensus 5 s~vl~L~Nm~~~~~l~~d~~~~~~~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f 84 (105)
T 3v4m_A 5 TEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKF 84 (105)
T ss_dssp CSEEEEESSCCGGGSSSHHHHHHHHHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred CeEEEEECCCCHHHccChHHHHHHHHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEe
Confidence 445567777554322211 1224466777788999999999842 336888899998888843 469
Q ss_pred CCCCCcch
Q psy14413 694 DGRPSGYF 701 (711)
Q Consensus 694 ~~r~~~~~ 701 (711)
.+|+-...
T Consensus 85 ~GR~i~v~ 92 (105)
T 3v4m_A 85 ANRVVVTK 92 (105)
T ss_dssp TTEECEEE
T ss_pred CCCEEEEE
Confidence 99976553
No 242
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.72 E-value=61 Score=25.20 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=44.4
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC-eeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR-DRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
+..--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.+..++.. + .+.+|+-
T Consensus 9 ~~~~l~V~nLp~~~--------t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g~~l 74 (92)
T 2dgt_A 9 ASTKLHVGNISPTC--------TNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQGKRM 74 (92)
T ss_dssp SSEEEEEESCCSSC--------CHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHHHTTEEETTEEE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHHhCCCeeCCcEE
Confidence 34457789997632 2456788999999999998855 456777899999988843 3 3666543
No 243
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.54 E-value=60 Score=25.88 Aligned_cols=62 Identities=10% Similarity=0.063 Sum_probs=44.9
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC-------eeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR-------DRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-------~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|...+.+.+..++.. + .+.+|+-
T Consensus 14 ~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 85 (103)
T 2cqi_A 14 QPRTLYVGNLSRDV--------TEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEV 85 (103)
T ss_dssp CCCEEEEESCCTTC--------CHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred CCCEEEEeCCCccC--------CHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHHHhCCCCcCCCeE
Confidence 34467889998642 2356778889999999998843 457888999999999852 3 3666543
No 244
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.02 E-value=85 Score=25.27 Aligned_cols=54 Identities=9% Similarity=-0.046 Sum_probs=40.9
Q ss_pred CCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhh
Q psy14413 628 GPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLT 689 (711)
Q Consensus 628 gp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~ 689 (711)
-|...-+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.+..++.
T Consensus 13 ~~~~~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 75 (111)
T 1x4h_A 13 TEGKTVFIRNLSFDS--------EEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLA 75 (111)
T ss_dssp CCCCCEEEESCCTTC--------CHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHH
Confidence 344467899998642 2356778889999999999852 34688899999999994
No 245
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.87 E-value=49 Score=26.75 Aligned_cols=64 Identities=9% Similarity=0.035 Sum_probs=46.4
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc---C--CCCCCCCcc
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR---D--EFDGRPSGY 700 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~---~--~f~~r~~~~ 700 (711)
|...-+||||+.=. ..+.|.++..+||+|..+.+- +.=.|-..+.+.+..++.. + .+.+|+-..
T Consensus 14 p~~~l~V~nLp~~~--------te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~~l~~~~~~~~Gr~l~V 85 (101)
T 2cq1_A 14 PSRVLHIRKLPGEV--------TETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYI 85 (101)
T ss_dssp CCSEEEEESCCTTC--------CHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHHHhccCCceECCcEEEE
Confidence 34468899998631 235677888999999999885 3568888999999988852 2 377776543
No 246
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=34.76 E-value=72 Score=25.81 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=47.1
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc---CC--CCCCCC
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR---DE--FDGRPS 698 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~---~~--f~~r~~ 698 (711)
..|...-++|||+.=. .-+.+.++..+||+|..+.+- +.=.|-..+.+.++.++.. .. +.+||-
T Consensus 18 ~~ps~~l~V~NLp~~~--------te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~~ln~~~~~i~Gr~i 89 (100)
T 3r27_A 18 TPASPVVHIRGLIDGV--------VEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNYAADNQIYIAGHPA 89 (100)
T ss_dssp CCCCSEEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCEEETTEEE
T ss_pred CCCCcEEEEeCCCCCC--------CHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHHHhcCCCceeCCcEE
Confidence 3355578899998632 234678899999999999884 4678888999999999843 33 557754
No 247
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.69 E-value=29 Score=28.92 Aligned_cols=65 Identities=15% Similarity=0.080 Sum_probs=48.0
Q ss_pred CCCCCccccchhhh-hhhhhhcchHHHHHHHHHHHcCCeeEEeecC---eeEEEEcCHHHHHHHhhc---C--CCCCCCC
Q psy14413 628 GPSWLPVVGCYLEF-SRLLSKFKYHYLVCENYARRYGPITGLRLGR---DRIILVSGFKAVREVLTR---D--EFDGRPS 698 (711)
Q Consensus 628 gp~~~p~~Gn~~~~-~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---~~~vv~~~~~~~~e~~~~---~--~f~~r~~ 698 (711)
-|...-+||||+.= . ..+.|.++..+||+|..+++.. .=.|-..+.+.+..++.. + .+.+|+-
T Consensus 23 ~p~~~l~V~NLp~~~~--------te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~l~~~~~~l~Gr~l 94 (112)
T 1x4f_A 23 ELGRVIHLSNLPHSGY--------SDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCV 94 (112)
T ss_dssp CCCCEEEEESCCCSSC--------CSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCC
T ss_pred CCCCEEEEeCCCCccC--------CHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHHHhccCCceECCEEE
Confidence 34556889999872 1 1245778889999999999964 457888899999888852 3 4888876
Q ss_pred cc
Q psy14413 699 GY 700 (711)
Q Consensus 699 ~~ 700 (711)
..
T Consensus 95 ~V 96 (112)
T 1x4f_A 95 KV 96 (112)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 248
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.66 E-value=16 Score=27.41 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=40.2
Q ss_pred cccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 634 VVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 634 ~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
++|||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.+..++... .+.+|+-
T Consensus 4 ~v~nlp~~~--------t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g~~l 71 (77)
T 1uaw_A 4 FIGGLSWQT--------TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTI 71 (77)
T ss_dssp EEESCCSSC--------CSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTTCCCSSCCC
T ss_pred EEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhCCCccCCEEE
Confidence 577877531 1245677888999998888743 3367778999999999553 4777764
No 249
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.64 E-value=69 Score=25.79 Aligned_cols=60 Identities=5% Similarity=-0.076 Sum_probs=44.1
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCC-eeEEeec----------CeeEEEEcCHHHHHHHhhc-----CCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGP-ITGLRLG----------RDRIILVSGFKAVREVLTR-----DEFD 694 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~-v~~~~~g----------~~~~vv~~~~~~~~e~~~~-----~~f~ 694 (711)
.--+||||+.-. ..+.+.++..+||+ |..+.+- +.=.|-..+.+.+..++.. ..+.
T Consensus 9 ~~l~V~nLp~~~--------t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~~g~~~~~ 80 (109)
T 2dis_A 9 CRLFIGGIPKMK--------KREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLW 80 (109)
T ss_dssp EEEEEECCCTTS--------CHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBT
T ss_pred CEEEEeCCCCcC--------CHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHHhhCCCceec
Confidence 346789998631 23567788899998 9998885 2557888999999999953 2467
Q ss_pred CCCC
Q psy14413 695 GRPS 698 (711)
Q Consensus 695 ~r~~ 698 (711)
+|+-
T Consensus 81 g~~l 84 (109)
T 2dis_A 81 GHQI 84 (109)
T ss_dssp TBCC
T ss_pred CCeE
Confidence 7654
No 250
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=33.91 E-value=74 Score=26.92 Aligned_cols=64 Identities=16% Similarity=0.103 Sum_probs=45.8
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f 693 (711)
.+.+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+
T Consensus 59 ~~~~~~~l~v~nlp~~~--------~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~ 130 (140)
T 2ku7_A 59 SATTKRVLYVGGLAEEV--------DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESEL 130 (140)
T ss_dssp SCSSCCEEEEECCCTTC--------CHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHHSTEEEE
T ss_pred CCCCCcEEEEEeCCCCC--------CHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHHhCCCEE
Confidence 33445567899998742 2356778889999999999832 357888999999999943 3 35
Q ss_pred CCCC
Q psy14413 694 DGRP 697 (711)
Q Consensus 694 ~~r~ 697 (711)
.+|+
T Consensus 131 ~g~~ 134 (140)
T 2ku7_A 131 FGRT 134 (140)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 5554
No 251
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=33.77 E-value=34 Score=27.95 Aligned_cols=61 Identities=8% Similarity=0.070 Sum_probs=44.2
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec-CeeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG-RDRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-~~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
.--+||||+.-. -.+.+.++..+||+|..+.+- +.-.|...+.+.+..++.. ..+.+|+-.
T Consensus 32 ~~l~V~nLp~~~--------t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~ 96 (108)
T 2jvo_A 32 TRLFVRPFPLDV--------QESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLE 96 (108)
T ss_dssp SEEEECSSCTTC--------CHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHHHTTCEETTEECE
T ss_pred CEEEEECCCCCC--------CHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHHcCCCEECCeEEE
Confidence 356789997642 235677888999999988884 4667788899999988843 347666543
No 252
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=32.56 E-value=34 Score=31.85 Aligned_cols=64 Identities=19% Similarity=0.122 Sum_probs=44.3
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f 693 (711)
|..|..--+||||+.=. --+.|.++.++||+|..+++-. .=.|-..+.+.+..++.. ..+
T Consensus 11 p~~p~~tlfVgnLp~~~--------te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~~~~~~~ 82 (213)
T 4f02_A 11 PSYPMASLYVGDLHPDV--------TEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVI 82 (213)
T ss_dssp ----CCEEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred CCCCCcEEEEeCCCCCC--------CHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHHhhhhhc
Confidence 44566667899998742 2457788899999999998731 347889999999999843 235
Q ss_pred CCCC
Q psy14413 694 DGRP 697 (711)
Q Consensus 694 ~~r~ 697 (711)
.+|+
T Consensus 83 ~g~~ 86 (213)
T 4f02_A 83 KGKP 86 (213)
T ss_dssp TTEE
T ss_pred CCcc
Confidence 5554
No 253
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=32.08 E-value=69 Score=29.41 Aligned_cols=59 Identities=15% Similarity=0.070 Sum_probs=43.4
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc---CCCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR---DEFDGRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~---~~f~~r~~ 698 (711)
--+||||+.-. ..+.+.++.++||+|..+++- +.=.|-..+.+.++.++.. ..+.+|+-
T Consensus 30 ~l~V~nLp~~~--------t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~~~~~~g~~l 100 (216)
T 2qfj_A 30 RVYVGSIYYEL--------GEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 100 (216)
T ss_dssp EEEEECCCTTC--------CHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHHHSSCCCC-CCC
T ss_pred EEEEECCCCCC--------CHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHHccCCeeCCeeE
Confidence 46789987642 235677889999999999883 3457889999999999952 34777754
No 254
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.04 E-value=64 Score=25.37 Aligned_cols=61 Identities=10% Similarity=0.012 Sum_probs=44.1
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC------------eeEEEEcCHHHHHHHhhc-C--CCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR------------DRIILVSGFKAVREVLTR-D--EFD 694 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~------------~~~vv~~~~~~~~e~~~~-~--~f~ 694 (711)
..--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.++.++.. + .+.
T Consensus 5 ~~~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 76 (98)
T 2cpf_A 5 SSGLFIKNLNFST--------TEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVD 76 (98)
T ss_dssp CCCEEEESCCTTC--------CHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEET
T ss_pred CCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHHhCCCeeC
Confidence 3457789998632 2356778889999999988852 456888999999999953 3 366
Q ss_pred CCCC
Q psy14413 695 GRPS 698 (711)
Q Consensus 695 ~r~~ 698 (711)
+|+-
T Consensus 77 g~~l 80 (98)
T 2cpf_A 77 GHKL 80 (98)
T ss_dssp TEEC
T ss_pred CeEE
Confidence 6643
No 255
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.66 E-value=86 Score=24.60 Aligned_cols=60 Identities=7% Similarity=0.068 Sum_probs=43.5
Q ss_pred CCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc-C--CCCCCC
Q psy14413 628 GPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR-D--EFDGRP 697 (711)
Q Consensus 628 gp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~-~--~f~~r~ 697 (711)
.|..--+|||+ .+ -.+.|.++..+||+|..+.++ +.-.|-..+.+.+..++.. + .+.+|+
T Consensus 13 ~~~~~l~V~n~-~~---------t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~ 78 (97)
T 1x5p_A 13 RKGNTLYVYGE-DM---------TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQ 78 (97)
T ss_dssp CCCSEEEEECS-SC---------CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHTTTEEETTEE
T ss_pred CCCCEEEEcCC-CC---------CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHHhCCCeECCeE
Confidence 34445788994 43 135677889999999999997 3567888899999999843 3 355554
No 256
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=31.37 E-value=56 Score=26.69 Aligned_cols=63 Identities=11% Similarity=0.047 Sum_probs=44.7
Q ss_pred CCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCC
Q psy14413 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFD 694 (711)
Q Consensus 627 pgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~ 694 (711)
+.+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|...+.+.++.++.. + .+.
T Consensus 12 ~~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 83 (115)
T 2dgo_A 12 TSNHFHVFVGDLSPEI--------TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLG 83 (115)
T ss_dssp STTCEEEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTCEET
T ss_pred CCCCcEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 3344467899998642 2356778889999999998843 347888999999999843 2 355
Q ss_pred CCC
Q psy14413 695 GRP 697 (711)
Q Consensus 695 ~r~ 697 (711)
+|+
T Consensus 84 g~~ 86 (115)
T 2dgo_A 84 GRQ 86 (115)
T ss_dssp TEE
T ss_pred CEE
Confidence 554
No 257
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.02 E-value=98 Score=25.70 Aligned_cols=57 Identities=11% Similarity=-0.065 Sum_probs=42.5
Q ss_pred CCCCCCCccc--cchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---eeEEEEcCHHHHHHHhhc
Q psy14413 626 VPGPSWLPVV--GCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---DRIILVSGFKAVREVLTR 690 (711)
Q Consensus 626 ppgp~~~p~~--Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---~~~vv~~~~~~~~e~~~~ 690 (711)
...|....+| |||..=. .-+.|.+...+||+|-.+++-. .=.|-..+.+.+++++..
T Consensus 21 ~~~pt~~L~V~Ng~L~~~~--------te~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai~~ 82 (114)
T 2cq2_A 21 VSYATQSLVVANGGLGNGV--------SRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 82 (114)
T ss_dssp CSSCCSEEEEETCTGGGTC--------CHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCCC--------CHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3445566889 7787631 2367888999999999999853 457888899999888843
No 258
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.94 E-value=30 Score=28.34 Aligned_cols=61 Identities=8% Similarity=-0.060 Sum_probs=44.3
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec-------CeeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG-------RDRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-------~~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
..--+||||+.-. ..+.+.++..+||+|..+.+- +.=.|-..+.+.++.++.. + .+.+|+-
T Consensus 29 ~~~l~V~nLp~~~--------te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l 99 (109)
T 2err_A 29 PKRLHVSNIPFRF--------RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKI 99 (109)
T ss_dssp CCEEEEESCCTTC--------CHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHHHTTCEETTEEC
T ss_pred CCEEEEECCCCcC--------CHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHHcCCCEECCEEE
Confidence 3457789998642 235677888999999999884 3557888999999988853 3 4667654
No 259
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=30.62 E-value=69 Score=25.16 Aligned_cols=62 Identities=13% Similarity=-0.020 Sum_probs=45.3
Q ss_pred CCccccchhh-hhhhhhhcchHHHHHHHHHHHcCCeeEEeec-CeeEEEEcCHHHHHHHhhc-C--CCCCCCCcc
Q psy14413 631 WLPVVGCYLE-FSRLLSKFKYHYLVCENYARRYGPITGLRLG-RDRIILVSGFKAVREVLTR-D--EFDGRPSGY 700 (711)
Q Consensus 631 ~~p~~Gn~~~-~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-~~~~vv~~~~~~~~e~~~~-~--~f~~r~~~~ 700 (711)
.--+||||+. -. ..+.+.++..+||+|..+.+- +.-.|-..+.+.+..++.. + .+.+|+-..
T Consensus 11 ~~l~V~nlp~~~~--------t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l~V 77 (96)
T 2kvi_A 11 SRLFIGNLPLKNV--------SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNFGKKLIL 77 (96)
T ss_dssp EEEEEESSTTSCC--------CHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCBTTTBCE
T ss_pred CEEEEeCCCcccC--------CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeCCcEEEE
Confidence 3567899985 31 135677888999999999883 3567888999999999853 3 477776543
No 260
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=30.31 E-value=46 Score=27.86 Aligned_cols=65 Identities=8% Similarity=0.069 Sum_probs=46.0
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc---CCCCCCCCc
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR---DEFDGRPSG 699 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~---~~f~~r~~~ 699 (711)
+|.|..--+|||+ .+ ..+.+.++..+||+|..+.++ +.=.|...+.+.+..++.. ..+.+|+-.
T Consensus 35 ~~~~~~~lfVgnl-~~---------te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~ 104 (121)
T 2bz2_A 35 APRKGNTLYVYGE-DM---------TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLK 104 (121)
T ss_dssp CCCCCCEEEEECS-SC---------CHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCE
T ss_pred CCCCCCEEEEcCC-CC---------CHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEECCeEEE
Confidence 3334445778994 33 135677888999999999987 4567888899999998843 347777643
Q ss_pred c
Q psy14413 700 Y 700 (711)
Q Consensus 700 ~ 700 (711)
.
T Consensus 105 V 105 (121)
T 2bz2_A 105 V 105 (121)
T ss_dssp E
T ss_pred E
Confidence 3
No 261
>2kt5_A RNA and export factor-binding protein 2; chaperone, mRNA processing, mRNA splicing, transport, nucleus, RNA-binding, spliceosome, transport; NMR {Mus musculus}
Probab=30.16 E-value=59 Score=27.06 Aligned_cols=59 Identities=10% Similarity=0.054 Sum_probs=43.4
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC--------eeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR--------DRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~--------~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
--+||||+.-. -.+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+.+|+-
T Consensus 37 ~l~V~nlp~~~--------t~~~l~~~F~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l 106 (124)
T 2kt5_A 37 KLLVSNLDFGV--------SDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPM 106 (124)
T ss_dssp EEEEESCCSSC--------CHHHHHHHHHTTSCCSEEEEECCSSSSCCSEEEEEESSHHHHHHHHHHHTTEESSSCEE
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhcCCeeEEEEEECCCCCEeeEEEEEECCHHHHHHHHHHcCCCEECCcEE
Confidence 56789998632 2356778889999999998842 457888999999999853 3 4777653
No 262
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.94 E-value=64 Score=26.14 Aligned_cols=68 Identities=7% Similarity=0.023 Sum_probs=50.0
Q ss_pred CCCCCCCCccccchhh-hhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---eeEEEEcCHHHHHHHhhc---C--CCCC
Q psy14413 625 NVPGPSWLPVVGCYLE-FSRLLSKFKYHYLVCENYARRYGPITGLRLGR---DRIILVSGFKAVREVLTR---D--EFDG 695 (711)
Q Consensus 625 ~ppgp~~~p~~Gn~~~-~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---~~~vv~~~~~~~~e~~~~---~--~f~~ 695 (711)
..+.|..--+||||+. =. .-+.|.++..+||+|..+++-. .=.|-..+.+.+..++.. + .+.+
T Consensus 10 ~~~~p~~~l~V~nLp~~~~--------te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~l~~~~~~~~G 81 (102)
T 1x4d_A 10 GRVETRRVVHIMDFQRGKN--------LRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFG 81 (102)
T ss_dssp CCCCCCCEEEEESCCCSSS--------HHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEETT
T ss_pred CCCCCCCEEEEeCCCCCcC--------CHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHHHcCCCceECC
Confidence 3444666788999987 31 2346778889999999999864 458899999999998852 2 3778
Q ss_pred CCCcc
Q psy14413 696 RPSGY 700 (711)
Q Consensus 696 r~~~~ 700 (711)
|+-..
T Consensus 82 r~l~V 86 (102)
T 1x4d_A 82 KPVRV 86 (102)
T ss_dssp EECEE
T ss_pred cEEEE
Confidence 87544
No 263
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.42 E-value=61 Score=25.89 Aligned_cols=66 Identities=12% Similarity=0.125 Sum_probs=46.4
Q ss_pred CCCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC----------eeEEEEcCHHHHHHHhhcC--C
Q psy14413 625 NVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR----------DRIILVSGFKAVREVLTRD--E 692 (711)
Q Consensus 625 ~ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~----------~~~vv~~~~~~~~e~~~~~--~ 692 (711)
.|+.|..--+||||+.-. ..+.+.++..+|| |..+++-. .=.|-..+.+.++.++.-+ .
T Consensus 10 ~~~~~~~~l~V~nlp~~~--------t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~ 80 (104)
T 1wi8_A 10 LPKSPPYTAFLGNLPYDV--------TEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEES 80 (104)
T ss_dssp CCSSSCEEEEEESCCSSC--------CHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGTCE
T ss_pred CCCCCCCEEEEeCCCCcC--------CHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHhcCCCE
Confidence 345555567899998642 2356778888999 99999832 3478889999999999323 3
Q ss_pred CCCCCCc
Q psy14413 693 FDGRPSG 699 (711)
Q Consensus 693 f~~r~~~ 699 (711)
+.+|+-.
T Consensus 81 ~~g~~l~ 87 (104)
T 1wi8_A 81 LGNKRIR 87 (104)
T ss_dssp ETTEECE
T ss_pred eCCcEEE
Confidence 6666543
No 264
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.40 E-value=64 Score=26.34 Aligned_cols=75 Identities=9% Similarity=-0.020 Sum_probs=49.2
Q ss_pred CCCCCCCccccchhhhhhhhhh---cchHHHHHHHHHHHcCCeeEEeec-----CeeEEEEcCHHHHHHHhhc---CCCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSK---FKYHYLVCENYARRYGPITGLRLG-----RDRIILVSGFKAVREVLTR---DEFD 694 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~---~~~~~~~~~~~~~~yg~v~~~~~g-----~~~~vv~~~~~~~~e~~~~---~~f~ 694 (711)
-|.|....++.|+..-..+... ....-+.+.++..+||+|..+.+- +.-.|...+.+.+..++.. ..|.
T Consensus 11 ~~~~s~~l~l~Nl~~~~~~~~~~~~~~~~e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~ 90 (112)
T 2dit_A 11 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFG 90 (112)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEET
T ss_pred CCCCceEEEEEcCCCHHHhccCHHHHHHHHHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 5556667888999554221110 012345677888899999999873 3457778899999988843 3477
Q ss_pred CCCCcc
Q psy14413 695 GRPSGY 700 (711)
Q Consensus 695 ~r~~~~ 700 (711)
+|+-..
T Consensus 91 gr~l~v 96 (112)
T 2dit_A 91 GRQITA 96 (112)
T ss_dssp TEECEE
T ss_pred CcEEEE
Confidence 776543
No 265
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=29.08 E-value=79 Score=28.49 Aligned_cols=64 Identities=9% Similarity=0.031 Sum_probs=46.4
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC--------eeEEEEcCHHHHHHHhhc-C--CCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR--------DRIILVSGFKAVREVLTR-D--EFDGRP 697 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~--------~~~vv~~~~~~~~e~~~~-~--~f~~r~ 697 (711)
|..--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|...+.+.++.++.. + .+.+|+
T Consensus 87 ~~~~l~V~nLp~~~--------te~~L~~~F~~~G~I~~v~i~~d~~g~~kG~afV~F~~~~~A~~Ai~~lng~~l~Gr~ 158 (177)
T 2f3j_A 87 TGAKLLVSNLDFGV--------SDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRP 158 (177)
T ss_dssp TCEEEEEECCCSCC--------CHHHHHHHHHHTSCCSEEEECCCTTSSCSCCEEEEESCHHHHHHHHHHSTTCBCSSSB
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEECCCCCEeeEEEEEeCCHHHHHHHHHHhCCCEECCEE
Confidence 33457889998642 2356778889999999999842 457888999999999853 2 477776
Q ss_pred Ccc
Q psy14413 698 SGY 700 (711)
Q Consensus 698 ~~~ 700 (711)
-..
T Consensus 159 l~V 161 (177)
T 2f3j_A 159 MDI 161 (177)
T ss_dssp CEE
T ss_pred EEE
Confidence 543
No 266
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.70 E-value=30 Score=27.21 Aligned_cols=63 Identities=16% Similarity=0.082 Sum_probs=44.3
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEE-eecC---------eeEEEEcCHHHHHHHhhc-C--CCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGL-RLGR---------DRIILVSGFKAVREVLTR-D--EFDGR 696 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~-~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r 696 (711)
..--+||||+.-. ..+.+.++..+||+|..+ ++-. .=.|-..+.+.++.++.. + .+.+|
T Consensus 5 ~~~l~V~nLp~~~--------t~~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 76 (96)
T 1x5t_A 5 SSGIFIGNLDPEI--------DEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNR 76 (96)
T ss_dssp CCEEEEECCCTTC--------CHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTE
T ss_pred CCEEEEeCCCCCC--------CHHHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHHHcCCCEECCE
Confidence 3456789998642 235677888999999877 6532 457888999999999953 2 36666
Q ss_pred CCcc
Q psy14413 697 PSGY 700 (711)
Q Consensus 697 ~~~~ 700 (711)
+-..
T Consensus 77 ~l~v 80 (96)
T 1x5t_A 77 PITV 80 (96)
T ss_dssp ECEE
T ss_pred EEEE
Confidence 5433
No 267
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=28.60 E-value=45 Score=30.99 Aligned_cols=59 Identities=14% Similarity=0.010 Sum_probs=42.6
Q ss_pred CCccccchh-hhhhhhhhcchHHHHHHHHHHHcCCeeEEeec----CeeEEEEcCHHHHHHHhhc---CCCCCCC
Q psy14413 631 WLPVVGCYL-EFSRLLSKFKYHYLVCENYARRYGPITGLRLG----RDRIILVSGFKAVREVLTR---DEFDGRP 697 (711)
Q Consensus 631 ~~p~~Gn~~-~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g----~~~~vv~~~~~~~~e~~~~---~~f~~r~ 697 (711)
..-+||||. .-. -.+.|.++-.+||+|..+.+- +.=.|...+.+.+..++.. ..+.+|+
T Consensus 5 ~~l~V~nL~~~~~--------~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~g~~ 71 (205)
T 3tyt_A 5 PVLMVYGLDQSKM--------NCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQK 71 (205)
T ss_dssp SEEEEECCCTTTC--------CHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred CEEEEeCCCcccC--------CHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHHHhCCCEECCce
Confidence 357889998 421 235677888999999999874 3568888999999988842 2355544
No 268
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=28.54 E-value=77 Score=26.89 Aligned_cols=59 Identities=10% Similarity=0.133 Sum_probs=42.9
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDGRP 697 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r~ 697 (711)
.--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|...+.+.+..++.. + .+.+|+
T Consensus 43 ~~l~V~nLp~~~--------~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 113 (139)
T 1u6f_A 43 RNLMVNYIPTTV--------DEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKR 113 (139)
T ss_dssp SEEEEESCSTTC--------CHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCE
T ss_pred CEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 346789997632 2356778889999999998832 347888999999999853 3 366664
No 269
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=28.25 E-value=59 Score=27.02 Aligned_cols=59 Identities=20% Similarity=0.060 Sum_probs=42.6
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|...+.+.++.++.-+ .|.+|+-
T Consensus 38 ~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~~g~~l 107 (124)
T 2jwn_A 38 SVYVGNVDYGS--------TAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRTI 107 (124)
T ss_dssp EEEEEEECTTC--------CHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEETTEEC
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeECCeEE
Confidence 35789987632 2356778889999999988832 3478889999999999323 3666654
No 270
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.13 E-value=1.3e+02 Score=24.37 Aligned_cols=62 Identities=15% Similarity=0.082 Sum_probs=45.1
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRP 697 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~ 697 (711)
+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++... .|.+|+
T Consensus 16 ~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g~~ 87 (116)
T 2cqd_A 16 TFTKIFVGGLPYHT--------TDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRK 87 (116)
T ss_dssp SSSEEEEECCCSSC--------CHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCEETTEE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhCCCcCCCEE
Confidence 33457789998642 2356778889999999999854 3578889999999999542 355554
Q ss_pred C
Q psy14413 698 S 698 (711)
Q Consensus 698 ~ 698 (711)
-
T Consensus 88 l 88 (116)
T 2cqd_A 88 A 88 (116)
T ss_dssp C
T ss_pred E
Confidence 3
No 271
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=28.09 E-value=65 Score=28.08 Aligned_cols=60 Identities=18% Similarity=0.125 Sum_probs=44.6
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCCCc
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRPSG 699 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~~~ 699 (711)
--++|||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.+..++..+ .+.+|+-.
T Consensus 89 ~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~~g~~i~ 159 (167)
T 2cjk_A 89 KIFVGGIGPDV--------RPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIE 159 (167)
T ss_dssp EEEEEEECTTC--------CHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCSEECSSSSCEE
T ss_pred eEEECCCCCCC--------CHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCCCEEeCCeEEE
Confidence 46789887631 2356778888999999998753 3468889999999999644 47777643
No 272
>3q2s_C Cleavage and polyadenylation specificity factor S; CFIM, CFIM25, CFIM68, CPSF5, CPSF6, CPSF, 3' END processing, processing, cleavage factor; 2.90A {Homo sapiens} PDB: 3q2t_C
Probab=28.08 E-value=44 Score=31.75 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=46.2
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcC--CeeEEeecCe---------eEEEEcCHHHHHHHhhc---CCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYG--PITGLRLGRD---------RIILVSGFKAVREVLTR---DEFDG 695 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg--~v~~~~~g~~---------~~vv~~~~~~~~e~~~~---~~f~~ 695 (711)
..--+||||..-. ..+.|.++..+|| +|..+++-.. =.|...+.+.++.++.. ..+.+
T Consensus 68 ~~~lfVgnL~~~~--------te~~L~~~F~~~G~~~v~~v~i~~d~~tg~skGfaFV~f~~~~~a~~Ai~~lng~~~~G 139 (229)
T 3q2s_C 68 RIALYIGNLTWWT--------TDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHG 139 (229)
T ss_dssp -CEEEEESCCTTC--------CHHHHHHHHHTTTCCCEEEEEEEECTTTCCEEEEEEEEESCTTHHHHHHTTSTTSCBTT
T ss_pred ccEEEEeCCCCCC--------CHHHHHHHHHHHCCcceEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCeECC
Confidence 3347899997642 2356778889999 9999887432 37889999999999853 35888
Q ss_pred CCCcc
Q psy14413 696 RPSGY 700 (711)
Q Consensus 696 r~~~~ 700 (711)
|+...
T Consensus 140 r~l~V 144 (229)
T 3q2s_C 140 QNPVV 144 (229)
T ss_dssp BCCEE
T ss_pred EEeEE
Confidence 87554
No 273
>2e5i_A Heterogeneous nuclear ribonucleoprotein L-like; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=27.93 E-value=81 Score=26.64 Aligned_cols=55 Identities=5% Similarity=-0.016 Sum_probs=38.8
Q ss_pred cccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC----eeEEEEcCHHHHHHHh---hcCCCCCC
Q psy14413 634 VVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR----DRIILVSGFKAVREVL---TRDEFDGR 696 (711)
Q Consensus 634 ~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~----~~~vv~~~~~~~~e~~---~~~~f~~r 696 (711)
+||||..= --.+.|+++..+||+|-.+++.. +=.|...|.+.+..++ .+.++.++
T Consensus 29 ~V~NL~~~--------vt~~~L~~~Fs~yG~V~~v~i~~~~Gf~aFVef~~~~~A~~A~~~LnG~~i~g~ 90 (124)
T 2e5i_A 29 SIQNPLYP--------ITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKAALNGADIYAG 90 (124)
T ss_dssp EEESCCSC--------CCHHHHHHHHTTTSCEEEEEEEESSSEEEEEEESSHHHHHHHHHHHTTCCCBTT
T ss_pred EEcCcCCC--------CCHHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEecCC
Confidence 47998753 12457889999999998887742 3678888888777776 33456553
No 274
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.59 E-value=55 Score=26.00 Aligned_cols=65 Identities=15% Similarity=0.106 Sum_probs=45.9
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f 693 (711)
.+.|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+
T Consensus 8 ~~~~~~~l~V~nLp~~~--------t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 79 (102)
T 2cqb_A 8 MATTKRVLYVGGLAEEV--------DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESEL 79 (102)
T ss_dssp SCCCCSCEEEESCCSSC--------CHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEE
T ss_pred cCCCCCEEEEeCCCCCC--------CHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHhCCCEE
Confidence 34455567899998642 2456778889999999998832 346777899999999843 3 36
Q ss_pred CCCCC
Q psy14413 694 DGRPS 698 (711)
Q Consensus 694 ~~r~~ 698 (711)
.+|+-
T Consensus 80 ~g~~l 84 (102)
T 2cqb_A 80 FGRTI 84 (102)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 66643
No 275
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=27.38 E-value=95 Score=24.66 Aligned_cols=59 Identities=8% Similarity=0.111 Sum_probs=43.1
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC-eeEEEEcCHHHHHHHhhc-C--CCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR-DRIILVSGFKAVREVLTR-D--EFDGRP 697 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-~~~vv~~~~~~~~e~~~~-~--~f~~r~ 697 (711)
.--+||||+.-. ..+.+.++..+||+|..+.+-. .=.|-..+.+.++.++.. + .+.+|+
T Consensus 12 ~~l~V~nl~~~~--------t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g~~ 74 (103)
T 2dgu_A 12 KVLFVRNLANTV--------TEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGEN 74 (103)
T ss_dssp CCEEEECCCTTC--------CHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHHHTTEEETTEE
T ss_pred CEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHHHCCCccCCCE
Confidence 457889998642 2356778889999999998843 557778999999999853 3 355553
No 276
>2hzc_A Splicing factor U2AF 65 kDa subunit; RNA splicing, RRM, RNA recognition, alternative conformation binding protein; HET: P6G; 1.47A {Homo sapiens} PDB: 1u2f_A
Probab=27.03 E-value=90 Score=23.68 Aligned_cols=61 Identities=11% Similarity=0.129 Sum_probs=43.1
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHc----C-------CeeEEeec---CeeEEEEcCHHHHHHHhhcC--C
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRY----G-------PITGLRLG---RDRIILVSGFKAVREVLTRD--E 692 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~y----g-------~v~~~~~g---~~~~vv~~~~~~~~e~~~~~--~ 692 (711)
|..--++|||+.-. ..+.+.++..+| | +|..+++. +.=.|-..+.+.++.++.-+ .
T Consensus 5 ~~~~l~V~nLp~~~--------t~~~l~~~F~~~~~~~g~~~~~~~~v~~~~~~~~kg~afV~f~~~~~a~~A~~l~g~~ 76 (87)
T 2hzc_A 5 SARRLYVGNIPFGI--------TEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGII 76 (87)
T ss_dssp GGGEEEEESCCTTC--------CHHHHHHHHHHHHHHTTCCSSSSCSEEEEEECSSSSEEEEEESSHHHHHHHGGGTTCE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHHHhhhcccccCCCCcceEEEecCCCcEEEEEcCCHHHHHHHHhcCCCE
Confidence 34456789998642 234566777777 8 99999985 45678889999999999223 3
Q ss_pred CCCCC
Q psy14413 693 FDGRP 697 (711)
Q Consensus 693 f~~r~ 697 (711)
+.+|+
T Consensus 77 ~~g~~ 81 (87)
T 2hzc_A 77 FQGQS 81 (87)
T ss_dssp ETTEE
T ss_pred ECCeE
Confidence 66664
No 277
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=26.16 E-value=46 Score=29.39 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=45.9
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHcC--CeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYG--PITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDG 695 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg--~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~ 695 (711)
..--+||||+.-. ..+.|.++..+|| +|..+++-. .=.|...+.+.+..++.. + .+.+
T Consensus 55 ~~~lfVgnLp~~~--------te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~lng~~~~G 126 (156)
T 3n9u_C 55 RAAVYVGSFSWWT--------TDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNG 126 (156)
T ss_dssp -CEEEEECCCTTC--------CHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHHSTTCEETT
T ss_pred CCEEEEeCCCCCC--------CHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 3457899998642 2456778889999 999998831 347889999999999854 3 4777
Q ss_pred CCCcc
Q psy14413 696 RPSGY 700 (711)
Q Consensus 696 r~~~~ 700 (711)
|+-..
T Consensus 127 r~l~V 131 (156)
T 3n9u_C 127 EKVDV 131 (156)
T ss_dssp EECEE
T ss_pred eEeEE
Confidence 76543
No 278
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=25.68 E-value=64 Score=34.05 Aligned_cols=65 Identities=14% Similarity=0.027 Sum_probs=46.8
Q ss_pred CCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhc---CCCCC
Q psy14413 628 GPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTR---DEFDG 695 (711)
Q Consensus 628 gp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~---~~f~~ 695 (711)
.|....|||||+.-. ....|.++..+||+|..+.+- +.=+|...+.+.+..++.. ..|.+
T Consensus 100 ~~~~~lfV~nL~~~~--------te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~lng~~i~g 171 (437)
T 3pgw_S 100 DAFKTLFVARVNYDT--------TESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDG 171 (437)
T ss_pred CCCCEEEEeCCCCCC--------CHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHHcCCCEECC
Confidence 344567899998642 235677888999999999883 2457888999999999844 24666
Q ss_pred CCCcc
Q psy14413 696 RPSGY 700 (711)
Q Consensus 696 r~~~~ 700 (711)
|+...
T Consensus 172 r~i~V 176 (437)
T 3pgw_S 172 RRVLV 176 (437)
T ss_pred EEEEE
Confidence 65444
No 279
>2cqg_A TDP-43, TAR DNA-binding protein-43; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.19 E-value=1.3e+02 Score=23.72 Aligned_cols=61 Identities=11% Similarity=0.101 Sum_probs=43.8
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC-CCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD-EFDGRP 697 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~-~f~~r~ 697 (711)
|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++... .+.+|+
T Consensus 14 ~~~~l~v~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~g~~ 84 (103)
T 2cqg_A 14 KTSDLIVLGLPWKT--------TEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRW 84 (103)
T ss_dssp CCCCEEEESCCSSC--------CHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCEEETTEE
T ss_pred CCCEEEEEcCCCcC--------CHHHHHHHHHhcCCeEEEEEEecCCCCCccceEEEEECCHHHHHHHHHcCCeeCCeE
Confidence 34457889987632 2356778889999999988832 3568889999999999642 355554
No 280
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=25.02 E-value=85 Score=24.78 Aligned_cols=59 Identities=14% Similarity=0.102 Sum_probs=42.6
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---CeeEEEEcCHHHHHHHhhc-C--CCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---RDRIILVSGFKAVREVLTR-D--EFDGRP 697 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---~~~~vv~~~~~~~~e~~~~-~--~f~~r~ 697 (711)
.--+||||+.-. ..+.+.++..+||+|..+++. +.=.|-..+.+.+..++.. + .+.+|+
T Consensus 28 ~~l~V~nlp~~~--------~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 92 (101)
T 2la4_A 28 TTAYIGNIPHFA--------TEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVALANFPFQGRN 92 (101)
T ss_dssp CEEEEESCCTTC--------CHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHTTCEETTEE
T ss_pred CEEEEcCCCccc--------CHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHHHhCCCeECCeE
Confidence 457789997632 235677888999999999985 3556777899988888843 2 366654
No 281
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=25.00 E-value=40 Score=27.81 Aligned_cols=58 Identities=2% Similarity=-0.102 Sum_probs=42.7
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDGRP 697 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r~ 697 (711)
--+||||+.-. -.+.+.++..+||+|..+++-. .=.|-..+.+.++.++.. + .+.+|+
T Consensus 42 ~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 111 (118)
T 2khc_A 42 NLFIYHLPQEF--------TDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKR 111 (118)
T ss_dssp EEEEECSCTTC--------CHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHHCCCCEETTEE
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHHcCCCEECCEE
Confidence 46789998642 2356778889999999998843 347888999999999853 3 366654
No 282
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=24.97 E-value=89 Score=25.22 Aligned_cols=62 Identities=13% Similarity=0.128 Sum_probs=43.2
Q ss_pred CCCCccccchhhh-hhhhhhcchHHHHHHHHHHHcCCeeEEeecC-eeEEEEcCHHHHHHHhhc---CCCCCCCC
Q psy14413 629 PSWLPVVGCYLEF-SRLLSKFKYHYLVCENYARRYGPITGLRLGR-DRIILVSGFKAVREVLTR---DEFDGRPS 698 (711)
Q Consensus 629 p~~~p~~Gn~~~~-~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~-~~~vv~~~~~~~~e~~~~---~~f~~r~~ 698 (711)
+..--+||||+.- . ..+.+.++..+||+|..+.+.. .=.|-..+.+.++.++.. ..+.+|+-
T Consensus 26 ~~~~l~V~nl~~~~~--------t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l 92 (110)
T 1wf1_A 26 INSRVFIGNLNTALV--------KKSDVETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTL 92 (110)
T ss_dssp CSSEEEECSCCCSSC--------CHHHHHHHHGGGSCCSEEEEETTEEEEECSSSHHHHHHHHHHTTCEETTEEC
T ss_pred CCcEEEEeCCCcccC--------CHHHHHHHHHhCCCeEEEEEeCCEEEEEECCHHHHHHHHHHcCCCEECCeEE
Confidence 3345789999863 2 2456778889999999988732 445667888988888843 23666543
No 283
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=24.87 E-value=99 Score=28.95 Aligned_cols=59 Identities=8% Similarity=0.127 Sum_probs=43.9
Q ss_pred Cccccchhh-hhhhhhhcchHHHHHHHHHHHcCCeeEEeec----CeeEEEEcCHHHHHHHhhc---CCCCCCCC
Q psy14413 632 LPVVGCYLE-FSRLLSKFKYHYLVCENYARRYGPITGLRLG----RDRIILVSGFKAVREVLTR---DEFDGRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~-~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g----~~~~vv~~~~~~~~e~~~~---~~f~~r~~ 698 (711)
--+||||+. -. -.+.+.++.++||+|..+++- +.=.|-..+.+.++.++.. ..+.+|+-
T Consensus 36 ~l~V~nLp~~~~--------te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~~l 102 (229)
T 2adc_A 36 VLLVSNLNPERV--------TPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPI 102 (229)
T ss_dssp EEEEESCCTTTC--------CHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBC
T ss_pred EEEEeCCCcccC--------CHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHHHhCCCeECCeEE
Confidence 467899986 31 125677888999999999985 4568899999999999842 34666654
No 284
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.84 E-value=60 Score=26.48 Aligned_cols=58 Identities=10% Similarity=0.019 Sum_probs=42.3
Q ss_pred ccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec---------CeeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 633 PVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG---------RDRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 633 p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g---------~~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
-+||||+.-. ..+.+.++..+||+|..+.+- +.=.|-..+.+.++.++.-+ .+.+|+-
T Consensus 28 l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~~g~~l 96 (114)
T 2cq4_A 28 VFCMQLAARI--------RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPI 96 (114)
T ss_dssp EEEESCCTTC--------CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEETTEEE
T ss_pred EEEeCCCCCC--------CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCCCEeCCeEE
Confidence 5689987642 235677888999999999984 24578889999999988323 3666654
No 285
>2cpy_A RNA-binding protein 12; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.51 E-value=37 Score=27.94 Aligned_cols=65 Identities=6% Similarity=-0.019 Sum_probs=46.3
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCe-eEEeec--------CeeEEEEcCHHHHHHHhhcC--CCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPI-TGLRLG--------RDRIILVSGFKAVREVLTRD--EFD 694 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v-~~~~~g--------~~~~vv~~~~~~~~e~~~~~--~f~ 694 (711)
.|.+..--+||||+.-. ..+.+.++..+||.| ..+++- +.=.|-..+.+.++.++..+ .+.
T Consensus 11 ~~~~~~~l~V~nLp~~~--------t~~~l~~~F~~~g~v~~~v~i~~d~~g~~~G~afV~F~~~~~a~~Al~~~~~~~~ 82 (114)
T 2cpy_A 11 VNSAKVCAHITNIPFSI--------TKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLN 82 (114)
T ss_dssp CCSCCCEEEEESCCTTS--------CHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGGGCSEEET
T ss_pred CCCCccEEEEeCcCCcC--------CHHHHHHHHHhCCCcCCeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCCCccC
Confidence 45555667899998742 234677888899999 445542 35678889999999999665 377
Q ss_pred CCCC
Q psy14413 695 GRPS 698 (711)
Q Consensus 695 ~r~~ 698 (711)
+|+.
T Consensus 83 gr~i 86 (114)
T 2cpy_A 83 GREA 86 (114)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7754
No 286
>2do0_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RNA recognition motif, RRM, RNA binding domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.49 E-value=94 Score=25.17 Aligned_cols=60 Identities=7% Similarity=-0.096 Sum_probs=43.2
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC--------eeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR--------DRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~--------~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
.--+||||+.-. ..+.+.++..+||+|..+++-. .=.|...+.+.++.++.. + .+.+|+-
T Consensus 16 ~~l~V~nlp~~~--------~~~~l~~~f~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 86 (114)
T 2do0_A 16 STVFVANLDYKV--------GWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPM 86 (114)
T ss_dssp SCEEEESCCTTC--------CHHHHHHHHTTTSCEEEEEEEECTTCSEEEEEEEEESSHHHHHHHHHHHTTCEETTEEC
T ss_pred CEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEECCCCCeeeEEEEEECCHHHHHHHHHHhCCCEeCCCEE
Confidence 357789998642 2456778889999999888743 457888899999999843 2 3555543
No 287
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=23.60 E-value=1.3e+02 Score=23.72 Aligned_cols=60 Identities=13% Similarity=0.015 Sum_probs=43.0
Q ss_pred CCccccchhh-hhhhhhhcchHHHHHHHHHHHcCCeeEEeec-CeeEEEEcCHHHHHHHhhc-C--CCCCCCC
Q psy14413 631 WLPVVGCYLE-FSRLLSKFKYHYLVCENYARRYGPITGLRLG-RDRIILVSGFKAVREVLTR-D--EFDGRPS 698 (711)
Q Consensus 631 ~~p~~Gn~~~-~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g-~~~~vv~~~~~~~~e~~~~-~--~f~~r~~ 698 (711)
.--+||||+. -. -.+.+.++..+||+|..+.+- +.=.|-..+.+.++.++.. + .+.+|+-
T Consensus 23 ~~l~V~nLp~~~~--------t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l 87 (97)
T 2xnq_A 23 SRLFIGNLPLKNV--------SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEXESQEMNFGKKL 87 (97)
T ss_dssp CEEEEESCCSSCC--------CHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHHHTTSEETTEEC
T ss_pred CEEEEeCCCcccC--------CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCEECCEEE
Confidence 3467899985 21 134677888999999999984 3557778899999999853 3 3556653
No 288
>3pgw_A U1-A; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 1fht_A 2u1a_A 2aym_A 2b0g_A
Probab=23.54 E-value=1.1e+02 Score=29.68 Aligned_cols=59 Identities=7% Similarity=-0.038 Sum_probs=42.5
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC----eeEEEEcCHHHHHHHhhc---CCCC-CCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR----DRIILVSGFKAVREVLTR---DEFD-GRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~----~~~vv~~~~~~~~e~~~~---~~f~-~r~~ 698 (711)
.-+||||+.-. ..+.+.++..+||+|..+++-. .=+|-..+.+.+..++.. ..+. +|+-
T Consensus 209 ~l~v~nl~~~~--------~~~~l~~~F~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~g~~l 275 (282)
T 3pgw_A 209 ILFLTNLPEET--------NELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAM 275 (282)
T ss_pred EEEEeCCCCcC--------CHHHHHHHHHhcCCeEEEEEecCCCcEEEEEeCCHHHHHHHHHHcCCcEeCCCCEE
Confidence 46789987642 2457778889999999998843 456777899999888853 2365 6653
No 289
>2dng_A Eukaryotic translation initiation factor 4H; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.49 E-value=73 Score=25.34 Aligned_cols=66 Identities=18% Similarity=0.126 Sum_probs=46.2
Q ss_pred CCCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CC
Q psy14413 625 NVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EF 693 (711)
Q Consensus 625 ~ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f 693 (711)
.++.|..--+||||+.-. ..+.+.++..+|| |..+++-. .=.|-..+.+.++.++.-+ .+
T Consensus 10 ~~~~~~~~l~V~nLp~~~--------t~~~l~~~F~~~g-i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 80 (103)
T 2dng_A 10 LPTEPPYTAYVGNLPFNT--------VQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALL 80 (103)
T ss_dssp CCSSSCEEEEEESCCTTC--------CHHHHHHHTTTSC-EEEEEEEECSSSCSEEEEEEEEESSHHHHHHHGGGTTCEE
T ss_pred CCCCCCeEEEEeCCCCCC--------CHHHHHHHHHhCC-ceEEEEeecCCCCccceEEEEEECCHHHHHHHHhhCCCeE
Confidence 355555567899998642 2356778888997 99988842 3468889999999999333 36
Q ss_pred CCCCCc
Q psy14413 694 DGRPSG 699 (711)
Q Consensus 694 ~~r~~~ 699 (711)
.+|+-.
T Consensus 81 ~g~~l~ 86 (103)
T 2dng_A 81 GDRSLR 86 (103)
T ss_dssp TTEECE
T ss_pred CCeEEE
Confidence 666543
No 290
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=23.49 E-value=61 Score=28.31 Aligned_cols=58 Identities=19% Similarity=0.213 Sum_probs=42.3
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC-CCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD-EFDGRP 697 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~-~f~~r~ 697 (711)
--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.++.++... .+.+|+
T Consensus 5 ~l~v~nLp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~g~~ 72 (167)
T 2cjk_A 5 KMFIGGLNWDT--------TEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKV 72 (167)
T ss_dssp EEEECSCCTTC--------CHHHHHHHHTTTCCEEEEECCCCTTTSSCCSCEEEEESSTHHHHHHHHSCCEETTEE
T ss_pred EEEEeCCCCCC--------CHHHHHHHHHhCCCEEEEEEEECCCCCCccceEEEEEccHHHHHHHHhcccccCCeE
Confidence 34688887631 2456778889999999999843 3478899999999999642 355554
No 291
>1x5o_A RNA binding motif, single-stranded interacting protein 1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.32 E-value=1.1e+02 Score=24.73 Aligned_cols=61 Identities=11% Similarity=0.048 Sum_probs=43.1
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC--------eeEEEEcCHHHHHHHhhc---CCCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR--------DRIILVSGFKAVREVLTR---DEFDGRP 697 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~--------~~~vv~~~~~~~~e~~~~---~~f~~r~ 697 (711)
+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.+..++.. ..+.+++
T Consensus 24 ~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~~~~ 95 (114)
T 1x5o_A 24 DPTNLYISNLPLSM--------DEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPP 95 (114)
T ss_dssp CTTEEEEESCCTTC--------CHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCT
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCEEEEEEEECCCCCcceEEEEEECCHHHHHHHHHHhCCCEEcCCc
Confidence 33457889998642 2346778888999999998832 356778899999999843 3464444
No 292
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.26 E-value=52 Score=26.26 Aligned_cols=62 Identities=13% Similarity=0.050 Sum_probs=44.3
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc-C--CCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR-D--EFDGR 696 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~-~--~f~~r 696 (711)
|..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|...+.+.++.++.. + .+.+|
T Consensus 14 ~~~~l~V~nlp~~~--------t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 85 (103)
T 2cq0_A 14 DNATIRVTNLSEDT--------RETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHL 85 (103)
T ss_dssp SSEEEEEESCCTTC--------CHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHcCCCeeCCc
Confidence 34457899998642 2345777888999999998843 347888999999999953 2 36666
Q ss_pred CC
Q psy14413 697 PS 698 (711)
Q Consensus 697 ~~ 698 (711)
+-
T Consensus 86 ~l 87 (103)
T 2cq0_A 86 IL 87 (103)
T ss_dssp EC
T ss_pred EE
Confidence 54
No 293
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.92 E-value=21 Score=29.32 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=43.1
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHH---HHHHHcCCeeEEeecC------------eeEEEEcCHHHHHHHhhc-C--
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCE---NYARRYGPITGLRLGR------------DRIILVSGFKAVREVLTR-D-- 691 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~---~~~~~yg~v~~~~~g~------------~~~vv~~~~~~~~e~~~~-~-- 691 (711)
..--+||||+.-. ..+.+. ++..+||+|..+.+-. .=.|...+.+.++.++.. +
T Consensus 15 ~~~l~V~nLp~~~--------~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~ 86 (111)
T 2cpi_A 15 KNLVFVVGLSQRL--------ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNV 86 (111)
T ss_dssp SSCEEEEEECTTT--------CCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTE
T ss_pred CCEEEEECCCCCC--------CHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCC
Confidence 3456899998742 123455 7778999999998852 456888999999999954 3
Q ss_pred CCCCCCC
Q psy14413 692 EFDGRPS 698 (711)
Q Consensus 692 ~f~~r~~ 698 (711)
.+.+|+-
T Consensus 87 ~~~gr~l 93 (111)
T 2cpi_A 87 VVDGRTL 93 (111)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 3666643
No 294
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.82 E-value=1.9e+02 Score=23.12 Aligned_cols=48 Identities=17% Similarity=0.186 Sum_probs=37.3
Q ss_pred HHHHHHHHHHcCCeeEEeec----CeeEEEEcCHHHHHHHhhc-CCCCCCCCc
Q psy14413 652 YLVCENYARRYGPITGLRLG----RDRIILVSGFKAVREVLTR-DEFDGRPSG 699 (711)
Q Consensus 652 ~~~~~~~~~~yg~v~~~~~g----~~~~vv~~~~~~~~e~~~~-~~f~~r~~~ 699 (711)
.+.|.++..+||+|..+++- +.=+|...+.+.+..++.. +.+.+||..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~~~~~~g~~l~ 83 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNEVGLVDNPLK 83 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHTCCBCSSSBCE
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHhcCCCCCCeEE
Confidence 45678899999999999984 2457888999999999965 346677653
No 295
>1b7f_A Protein (SXL-lethal protein), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3; splicing regulation, RNP domain, RNA complex; 2.60A {Drosophila melanogaster} SCOP: d.58.7.1 d.58.7.1 PDB: 3sxl_A* 1sxl_A 2sxl_A
Probab=22.75 E-value=1.1e+02 Score=26.49 Aligned_cols=59 Identities=14% Similarity=0.042 Sum_probs=42.4
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecCe---------eEEEEcCHHHHHHHhhc---CCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRD---------RIILVSGFKAVREVLTR---DEFDG 695 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~~---------~~vv~~~~~~~~e~~~~---~~f~~ 695 (711)
+..--++|||+.-. ..+.+.++..+||+|..+.+-.. =.|-..+.+.+..++.. ..+.+
T Consensus 88 ~~~~l~v~nl~~~~--------t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 158 (168)
T 1b7f_A 88 KDTNLYVTNLPRTI--------TDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEG 158 (168)
T ss_dssp TTCEEEEESCCTTC--------CHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTT
T ss_pred CCCCEEEeCCCCCC--------CHHHHHHhhhcCCcEEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHHhcCCEecC
Confidence 34457789988632 23567788899999998887433 37778999999999843 35766
No 296
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.15 E-value=1.3e+02 Score=23.64 Aligned_cols=60 Identities=15% Similarity=0.136 Sum_probs=43.5
Q ss_pred CCCccccchhhhhhhhhhcchHHHHHHHHHHHc--CCeeEEeecC-eeEEEEcCHHHHHHHhhc-C--CCCCCC
Q psy14413 630 SWLPVVGCYLEFSRLLSKFKYHYLVCENYARRY--GPITGLRLGR-DRIILVSGFKAVREVLTR-D--EFDGRP 697 (711)
Q Consensus 630 ~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~y--g~v~~~~~g~-~~~vv~~~~~~~~e~~~~-~--~f~~r~ 697 (711)
..--+||||+.-. ..+.+.++..+| |+|..+.+-. .=.|-..+.+.++.++.. + .+.+|+
T Consensus 15 ~~~l~V~nLp~~~--------t~~~l~~~F~~~g~g~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 80 (99)
T 2cpd_A 15 VKILYVRNLMLST--------SEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSP 80 (99)
T ss_dssp CCEEEEESCCTTC--------CHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSEEETTEE
T ss_pred cCEEEEeCCCCCC--------CHHHHHHHHHhcCCcceEEEEEeCCeEEEEeCCHHHHHHHHHHhCCCEeCCcE
Confidence 3457889998642 235677888999 9999988743 556788999999999852 2 355554
No 297
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.65 E-value=47 Score=25.63 Aligned_cols=51 Identities=8% Similarity=-0.020 Sum_probs=38.4
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeec----CeeEEEEcCHHHHHHHhh
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLG----RDRIILVSGFKAVREVLT 689 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g----~~~~vv~~~~~~~~e~~~ 689 (711)
.--+||||+.-. ..+.+.++..+||+|..+++- +.=.|-..+.+.++++..
T Consensus 6 ~~l~V~nLp~~~--------te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~~~ 60 (88)
T 1wf0_A 6 SGVFVGRCTGDM--------TEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG 60 (88)
T ss_dssp CEEEEESCCSSS--------CHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT
T ss_pred cEEEEeCCCCCC--------CHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHHhc
Confidence 346789987632 235677888999999999984 356888899999987653
No 298
>1wel_A RNA-binding protein 12; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.32 E-value=41 Score=28.18 Aligned_cols=67 Identities=6% Similarity=0.014 Sum_probs=44.7
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeE---Eee---c---CeeEEEEcCHHHHHHHhhcC--CCC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITG---LRL---G---RDRIILVSGFKAVREVLTRD--EFD 694 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~---~~~---g---~~~~vv~~~~~~~~e~~~~~--~f~ 694 (711)
|+.+..--+||||+.-. ..+.+.++..+||+|.. +.. | +.=.|...+.+.++.++..+ .+.
T Consensus 21 ~~~~~~~l~V~nLp~~~--------te~~l~~~F~~~G~v~~~~~~~~~~~g~~~G~afV~F~~~~~a~~Al~~~g~~~~ 92 (124)
T 1wel_A 21 PHEAGFCVYLKGLPFEA--------ENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRHKQYMG 92 (124)
T ss_dssp CCCCCCEEEEECCCTTC--------CHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHTSCSBCST
T ss_pred CCCCCcEEEEeCCCCCC--------CHHHHHHHHHhcCCccceEEEEECCCCCCCeEEEEEECCHHHHHHHHHhCCCeEC
Confidence 44444567899998742 23567778889998733 221 1 24578889999999999654 488
Q ss_pred CCCCcc
Q psy14413 695 GRPSGY 700 (711)
Q Consensus 695 ~r~~~~ 700 (711)
+|+...
T Consensus 93 gr~i~V 98 (124)
T 1wel_A 93 NRFIQV 98 (124)
T ss_dssp TSCBEE
T ss_pred CcEEEE
Confidence 887543
No 299
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=21.26 E-value=1.4e+02 Score=25.86 Aligned_cols=61 Identities=11% Similarity=0.032 Sum_probs=44.5
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEee------cC---eeEEEEcCHHHHHHHhhc-C--CCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRL------GR---DRIILVSGFKAVREVLTR-D--EFDGR 696 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~------g~---~~~vv~~~~~~~~e~~~~-~--~f~~r 696 (711)
|...-+||||+.-. ..+.+.++..+||+|..+.+ |. .=.|...+.+.++.++.. + .+.+|
T Consensus 38 ~~~~l~V~nlp~~~--------t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 109 (156)
T 1h2v_Z 38 KSCTLYVGNLSFYT--------TEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDR 109 (156)
T ss_dssp TCCEEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 44567899998632 24567888999999999998 22 347888999999999953 3 35555
Q ss_pred C
Q psy14413 697 P 697 (711)
Q Consensus 697 ~ 697 (711)
+
T Consensus 110 ~ 110 (156)
T 1h2v_Z 110 I 110 (156)
T ss_dssp E
T ss_pred E
Confidence 4
No 300
>1fxl_A Paraneoplastic encephalomyelitis antigen HUD; protein-RNA complex, AU-rich element, transcription/RNA complex; 1.80A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1g2e_A 1fnx_H 1d8z_A 1d9a_A 3hi9_A
Probab=21.26 E-value=1.1e+02 Score=26.48 Aligned_cols=58 Identities=16% Similarity=0.033 Sum_probs=42.4
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhc---CCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTR---DEFDGRP 697 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~---~~f~~r~ 697 (711)
--++||++.-. ..+.+.++..+||+|..+++-. .=.|-..+.+.+..++.. ..+.+|.
T Consensus 90 ~l~v~nl~~~~--------t~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 159 (167)
T 1fxl_A 90 NLYVSGLPKTM--------TQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAT 159 (167)
T ss_dssp EEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCS
T ss_pred cEEECCCCCcC--------CHHHHHHHHHhcCCEeEEEEEecCCCCCccceEEEEeCCHHHHHHHHHHhcCCccCCCc
Confidence 46788887632 2356788889999999888742 236777899999999853 4588775
No 301
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=20.78 E-value=79 Score=28.43 Aligned_cols=61 Identities=13% Similarity=0.088 Sum_probs=44.6
Q ss_pred CCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC---------eeEEEEcCHHHHHHHhhcC--CCCCCC
Q psy14413 629 PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR---------DRIILVSGFKAVREVLTRD--EFDGRP 697 (711)
Q Consensus 629 p~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~---------~~~vv~~~~~~~~e~~~~~--~f~~r~ 697 (711)
+..--+||||+.-. ..+.+.++..+||+|..+++-. .=.|...+.+.++.++..+ .+.+|+
T Consensus 12 ~~~~l~V~nLp~~~--------te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~~~~~g~~ 83 (196)
T 1l3k_A 12 QLRKLFIGGLSFET--------TDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRV 83 (196)
T ss_dssp GGGEEEEESCCTTC--------CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEE
T ss_pred CCCEEEEeCCCCCC--------CHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCCCEECCEE
Confidence 34457899998642 2356788999999998888732 4578899999999999653 255554
No 302
>2e5g_A U6 snRNA-specific terminal uridylyltransferase 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.68 E-value=1.2e+02 Score=23.46 Aligned_cols=59 Identities=15% Similarity=0.230 Sum_probs=41.4
Q ss_pred CccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecC----eeEEEEcCHHHHHHHhhcC--CCCCCCC
Q psy14413 632 LPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR----DRIILVSGFKAVREVLTRD--EFDGRPS 698 (711)
Q Consensus 632 ~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~----~~~vv~~~~~~~~e~~~~~--~f~~r~~ 698 (711)
--+||||+.-. ..+.+.++..+||+|..+..-. .=.|-..+.+.++.++.-+ .+.+|+-
T Consensus 10 ~l~V~nl~~~~--------t~~~l~~~F~~~G~v~~v~~~~~~g~~afV~f~~~~~a~~ai~l~g~~~~g~~l 74 (94)
T 2e5g_A 10 SVFVSGFPRGV--------DSAQLSEYFLAFGPVASVVMDKDKGVFAIVEMGDVGAREAVLSQSQHSLGGHRL 74 (94)
T ss_dssp EEEEECCCTTC--------CHHHHHHHGGGTSCEEEEEECSSSCCEEEEEESSHHHHHHHHTCSCCEETTEEC
T ss_pred EEEEECCCCCC--------CHHHHHHHHHhcCCeEEEEEcCCCCcEEEEEECCHHHHHHHHhcCCeEECCEEE
Confidence 46789987642 2456778889999999874322 4567788999999999633 3666643
No 303
>2g4b_A Splicing factor U2AF 65 kDa subunit; protein-RNA complex, RNA splicing factor, RNA recognition motif, RNA binding protein/RNA complex; 2.50A {Homo sapiens} PDB: 2u2f_A
Probab=20.40 E-value=85 Score=27.47 Aligned_cols=65 Identities=8% Similarity=0.160 Sum_probs=45.0
Q ss_pred CCCCCCCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecCe---------eEEEEcCHHHHHHHhhc-C--CC
Q psy14413 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRD---------RIILVSGFKAVREVLTR-D--EF 693 (711)
Q Consensus 626 ppgp~~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~~---------~~vv~~~~~~~~e~~~~-~--~f 693 (711)
++.+..--++|||+.-. ..+.+.++..+||+|..+++-.. =.|-..+.+.+..++.+ + .+
T Consensus 90 ~~~~~~~l~v~nlp~~~--------t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~ 161 (172)
T 2g4b_A 90 PLPGAHKLFIGGLPNYL--------NDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQL 161 (172)
T ss_dssp CCTTTTCEEEECCCTTC--------CHHHHHHHHHTTSCEEEEEEEECTTTCSEEEEEEEEESSTTHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEEcCCCcC--------CHHHHHHHHHhcCCceEEEEEecCCCCCcceEEEEEeCCHHHHHHHHHHcCCCEE
Confidence 33344567789998742 24567788889999999888332 46777889988888853 3 46
Q ss_pred CCCCC
Q psy14413 694 DGRPS 698 (711)
Q Consensus 694 ~~r~~ 698 (711)
.+|+-
T Consensus 162 ~g~~l 166 (172)
T 2g4b_A 162 GDKKL 166 (172)
T ss_dssp TTEEC
T ss_pred CCeEE
Confidence 66653
No 304
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=20.27 E-value=80 Score=28.91 Aligned_cols=61 Identities=13% Similarity=0.059 Sum_probs=44.5
Q ss_pred CCccccchhhhhhhhhhcchHHHHHHHHHHHcCCeeEEeecCe---------eEEEEcCHHHHHHHhhc---CCCCCCCC
Q psy14413 631 WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRD---------RIILVSGFKAVREVLTR---DEFDGRPS 698 (711)
Q Consensus 631 ~~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~yg~v~~~~~g~~---------~~vv~~~~~~~~e~~~~---~~f~~r~~ 698 (711)
..-+||||+.-. ..+.+.++..+||+|..+++-.. =.|-..+.+.+..++.. ..|.+|+-
T Consensus 126 ~~l~v~nlp~~~--------t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~l~g~~~~g~~i 197 (216)
T 2qfj_A 126 NRIYVASVHQDL--------SDDDIKSVFEAFGKIKSATLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYL 197 (216)
T ss_dssp CEEEEECCCTTC--------CHHHHHHHHTTSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCBCSSSBC
T ss_pred cEEEEeCCCCcC--------CHHHHHHHHhccCCeeEEEEEecCCCCCcCceEEEEecCHHHHHHHHHHccCCEeCCcEE
Confidence 456789887642 24567788899999999988432 36888999999999853 34777764
Q ss_pred c
Q psy14413 699 G 699 (711)
Q Consensus 699 ~ 699 (711)
.
T Consensus 198 ~ 198 (216)
T 2qfj_A 198 R 198 (216)
T ss_dssp E
T ss_pred E
Confidence 3
Done!