RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14413
(711 letters)
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 269 bits (691), Expect = 1e-82
Identities = 70/204 (34%), Positives = 124/204 (60%), Gaps = 6/204 (2%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
+D+ +L + D+F AG ETT++ + +++ +L+ P V++K+ EEID ++ PTI DR
Sbjct: 270 SDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDR 329
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
+ LEATI E++R AP+ + H+A S +G + + + + +++NLW++ +++ W
Sbjct: 330 NRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWH 389
Query: 499 DPDVFRPERFIHPTSGEVLYD--ETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNIS 556
PD F PERF++P +G L + +PFG G R C+GE +AR LF+ ++ LL F++
Sbjct: 390 QPDQFMPERFLNP-AGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLE 448
Query: 557 IPSDEPLPAVTVLDGVTLAPAPYK 580
+P D LP++ + V +K
Sbjct: 449 VPDDGQLPSLEGIPKVVFLIDSFK 472
Score = 212 bits (542), Expect = 3e-61
Identities = 56/194 (28%), Positives = 108/194 (55%), Gaps = 15/194 (7%)
Query: 8 EIVSDHKKNTDKFY--DLVSAYIEEMKARSN-------KTSSFSDDQLLVLLLDLFMAGS 58
+I+ ++K+ +++ ++ N + SD+ +L + D+F AG
Sbjct: 227 KILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGV 286
Query: 59 ETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHG 115
ETT++ + +++ +L+ P V++K+ EEID ++ PTI DR + LEATI E++R
Sbjct: 287 ETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLR 346
Query: 116 NTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGE 175
AP+ + H+A S +G + + + + +++NLW++ +++ W PD F PERF++P +G
Sbjct: 347 PVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNP-AGT 405
Query: 176 VLYD--ETLIPFGL 187
L + +PFG
Sbjct: 406 QLISPSVSYLPFGA 419
Score = 77.6 bits (192), Expect = 4e-15
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
LP+VG L + + + ++YGPI +R+G ++V + +E
Sbjct: 11 KSLLSLPLVGSLP----FLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKE 66
Query: 687 VLTR--DEFDGRPSGYFFRLRALGRR 710
VL + +F GRP + + R+
Sbjct: 67 VLIKKGKDFSGRPQMATLDIASNNRK 92
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 265 bits (681), Expect = 2e-81
Identities = 74/202 (36%), Positives = 121/202 (59%), Gaps = 4/202 (1%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
D+ L +++ DLF AG TTS +L++ +L +I +P VQR++Q+EID + P + D+
Sbjct: 269 NDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQ 328
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
PY A I E+ R G+ P+GV H + + + IP+ + ++ NL S+++D+ W
Sbjct: 329 AHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWE 388
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIP 558
P F PE F+ G + E +PF G+R CLGEP+AR LF+F +SLL HF+ S+P
Sbjct: 389 KPFRFHPEHFLDA-QGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
Query: 559 SDEPLPAVTVLDGVTLAPAPYK 580
+ +P P+ + ++P+PY+
Sbjct: 448 TGQPRPSHHGVFAFLVSPSPYE 469
Score = 224 bits (573), Expect = 9e-66
Identities = 64/187 (34%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
Query: 8 EIVSDHKKNTDKFY---DLVSAYIEEM-KARSNKTSSFSDDQLLVLLLDLFMAGSETTSN 63
E++++H+ D DL A++ EM KA+ N SSF+D+ L +++ DLF AG TTS
Sbjct: 231 ELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTST 290
Query: 64 SLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHGNTAPI 120
+L++ +L +I +P VQR++Q+EID + P + D+ PY A I E+ R G+ P+
Sbjct: 291 TLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPL 350
Query: 121 GVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDE 180
GV H + + + IP+ + ++ NL S+++D+ W P F PE F+ G + E
Sbjct: 351 GVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDA-QGHFVKPE 409
Query: 181 TLIPFGL 187
+PF
Sbjct: 410 AFLPFSA 416
Score = 77.2 bits (191), Expect = 5e-15
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
PGP LP +G L F+ + RR+G + L+L +++++G AVRE
Sbjct: 13 PGPLPLPGLGNLLHV-----DFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVRE 67
Query: 687 VLTR--DEFDGRPSGYFFRLRALGRR 710
L ++ RP ++ G R
Sbjct: 68 ALVTHGEDTADRPPVPITQILGFGPR 93
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 262 bits (673), Expect = 5e-80
Identities = 72/205 (35%), Positives = 120/205 (58%), Gaps = 8/205 (3%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
++++ L+ D+F AG +T + ++S+S++YL+ P +QRKIQ+E+D+ + P + DR
Sbjct: 279 PQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDR 338
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
+ PYLEA I+E RH + P + H + + L + IP+ + VN W + D E W
Sbjct: 339 PQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWE 398
Query: 499 DPDVFRPERFIHPTSGEVL---YDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNI 555
DP FRPERF+ G + E ++ FG+GKRRC+GE +A+ +F+FL+ LL
Sbjct: 399 DPSEFRPERFLTA-DGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEF 457
Query: 556 SIPSDEPLPAVTVLDGVTLAPAPYK 580
S+P + +T + G+T+ A +
Sbjct: 458 SVPPGVKVD-LTPIYGLTMKHARCE 481
Score = 220 bits (564), Expect = 2e-64
Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 10/189 (5%)
Query: 8 EIVSDHKKNTDKFY--DLVSAYIEEM-KARSNKTSSFSDDQLLVLLLDLFMAGSETTSNS 64
+ V +H ++ DK D+ A + K + ++++ L+ D+F AG +T + +
Sbjct: 242 KTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTA 301
Query: 65 LSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHGNTAPIG 121
+S+S++YL+ P +QRKIQ+E+D+ + P + DR + PYLEA I+E RH + P
Sbjct: 302 ISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFT 361
Query: 122 VAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVL---Y 178
+ H + + L + IP+ + VN W + D E W DP FRPERF+ G +
Sbjct: 362 IPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTA-DGTAINKPL 420
Query: 179 DETLIPFGL 187
E ++ FG+
Sbjct: 421 SEKMMLFGM 429
Score = 77.2 bits (191), Expect = 5e-15
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 614 LLNLFKKSHRLNV---PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRL 670
+L + + P P P++G L K +L ++RYG + +R+
Sbjct: 3 VLKGLRPRVPKGLKSPPEPWGWPLLGHVLTLG------KNPHLALSRMSQRYGDVLQIRI 56
Query: 671 GRDRIILVSGFKAVREVLTR--DEFDGRPSGYFFRLRALGRRL 711
G ++++S +R+ L R D+F GRP Y L G+ L
Sbjct: 57 GSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSL 99
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 259 bits (664), Expect = 6e-79
Identities = 75/202 (37%), Positives = 127/202 (62%), Gaps = 5/202 (2%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
+ + L+ + +L +AG+ETT+N L +++L++ YP++Q ++Q+EID N +P+ D+
Sbjct: 270 SKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDK 329
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
K PY EA + E++R N P+G+ H + + + Y IP+ + ++ NL+S+ D+++W
Sbjct: 330 CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR 389
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIP 558
DP+VF PERF+ SG E L+PF LG+R CLGE +AR +F+F ++LL F++ P
Sbjct: 390 DPEVFHPERFLDS-SGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFP 448
Query: 559 SDEPLPAVTVLDGVTLAPAPYK 580
+ P + G+TL P PY
Sbjct: 449 HELV-PDLKPRLGMTLQPQPYL 469
Score = 221 bits (566), Expect = 9e-65
Identities = 63/186 (33%), Positives = 113/186 (60%), Gaps = 7/186 (3%)
Query: 8 EIVSDHKKNTDKFY--DLVSAYIEEM-KARSNKTSSFSDDQLLVLLLDLFMAGSETTSNS 64
++ N V AY++EM + +++ +S+FS + L+ + +L +AG+ETT+N
Sbjct: 233 RLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNV 292
Query: 65 LSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHGNTAPIG 121
L +++L++ YP++Q ++Q+EID N +P+ D+ K PY EA + E++R N P+G
Sbjct: 293 LRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 122 VAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 181
+ H + + + Y IP+ + ++ NL+S+ D+++W DP+VF PERF+ SG E
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDS-SGYFAKKEA 411
Query: 182 LIPFGL 187
L+PF L
Sbjct: 412 LVPFSL 417
Score = 72.2 bits (178), Expect = 2e-13
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
PGP LP +G L + + ++ ++ YG I L LG ++++G+ V+E
Sbjct: 15 PGPPGLPFIGNIYS---LAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKE 71
Query: 687 VLTR--DEFDGRPSGYFFR 703
L + F RP F
Sbjct: 72 CLVHQSEIFADRPCLPLFM 90
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 257 bits (660), Expect = 5e-78
Identities = 61/204 (29%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
+ + + D+F A +T S +L + +L RYP VQ ++Q E+D ++ P + D+
Sbjct: 276 DLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQ 335
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
PY+ A + E MR + P+ + H + + Y IP+D+++ VN WS+ D W
Sbjct: 336 PNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWP 395
Query: 499 DPDVFRPERFIHPTSGEVLYD--ETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNIS 556
+P+ F P RF+ G + D ++ F +GKRRC+GE +++ LF+F+S L + +
Sbjct: 396 NPENFDPARFLDK-DGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFR 454
Query: 557 IPSDEPLPAVTVLDGVTLAPAPYK 580
+EP + G+T+ P +K
Sbjct: 455 ANPNEP-AKMNFSYGLTIKPKSFK 477
Score = 212 bits (543), Expect = 2e-61
Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 8 EIVSDHKKNTDKFY---DLVSAYIEEMKAR-----SNKTSSFSDDQLLVLLLDLFMAGSE 59
+ H ++ D++ A+I + + + + + + D+F A +
Sbjct: 234 DKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQD 293
Query: 60 TTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHGN 116
T S +L + +L RYP VQ ++Q E+D ++ P + D+ PY+ A + E MR +
Sbjct: 294 TLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSS 353
Query: 117 TAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEV 176
P+ + H + + Y IP+D+++ VN WS+ D W +P+ F P RF+ G +
Sbjct: 354 FVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDK-DGLI 412
Query: 177 LYD--ETLIPFGL 187
D ++ F +
Sbjct: 413 NKDLTSRVMIFSV 425
Score = 73.0 bits (180), Expect = 1e-13
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
PGP P++G + +L ARRYG + +RLG I++++G +A+ +
Sbjct: 12 PGPFAWPLIGNAAAVG------QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQ 65
Query: 687 VLTR--DEFDGRPSGYFFRL 704
L + F RPS FR+
Sbjct: 66 ALVQQGSAFADRPSFASFRV 85
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 254 bits (651), Expect = 7e-77
Identities = 69/207 (33%), Positives = 114/207 (55%), Gaps = 13/207 (6%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS------LNKEPTI 435
+ + + ++DLF+ G+ETT+++LS++V +L+ +P +QR++QEE+D T
Sbjct: 276 LEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTY 335
Query: 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQE 495
DR + P L ATI E++R P+ + HR + S + Y IP+ +++ NL D+
Sbjct: 336 KDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDET 395
Query: 496 HWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNI 555
W P FRP+RF+ P + + + + FG G R CLGE +AR LF+ L+ LL F +
Sbjct: 396 VWEQPHEFRPDRFLEPGA-----NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTL 450
Query: 556 SIPSDEPLPAV--TVLDGVTLAPAPYK 580
P LP++ GV L P++
Sbjct: 451 LPPPVGALPSLQPDPYCGVNLKVQPFQ 477
Score = 208 bits (533), Expect = 6e-60
Identities = 52/190 (27%), Positives = 99/190 (52%), Gaps = 15/190 (7%)
Query: 8 EIVSDHKKNTDKFY--DLVSAYIEEM-KARSNK-TSSFSDDQLLVLLLDLFMAGSETTSN 63
+ + HK++ D+ ++ + + R + + + + ++DLF+ G+ETT++
Sbjct: 238 KQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTAS 297
Query: 64 SLSFSVLYLIRYPHVQRKIQEEIDS------LNKEPTILDRYKCPYLEATIMEIMRHGNT 117
+LS++V +L+ +P +QR++QEE+D T DR + P L ATI E++R
Sbjct: 298 TLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPV 357
Query: 118 APIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVL 177
P+ + HR + S + Y IP+ +++ NL D+ W P FRP+RF+ P +
Sbjct: 358 VPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGA---- 413
Query: 178 YDETLIPFGL 187
+ + + FG
Sbjct: 414 -NPSALAFGC 422
Score = 63.0 bits (154), Expect = 2e-10
Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 614 LLNLFKKSHRLNVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRD 673
L R + P+V +L + + ++ GP+ LRLG
Sbjct: 13 LAGAHLLWGRWKLRNLHLPPLVPGFLHL-----LQPNLPIHLLSLTQKLGPVYRLRLGLQ 67
Query: 674 RIILVSGFKAVREVLTR--DEFDGRPSGYFFRLRALGRR 710
+++++ + + E + R +F GRP ++L + +
Sbjct: 68 EVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQ 106
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 253 bits (649), Expect = 8e-77
Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 5/203 (2%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
T D + V + DLF AG+ETTS +L + +L L++YP ++ K+ EEID ++ P I DR
Sbjct: 264 TMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDR 323
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
+ PY++A + EI R P + H A + + Y+IP+ ++++ L S++ D + +
Sbjct: 324 QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFP 383
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIP 558
DP+ F+PE F++ +G+ Y + PF GKR C GE +AR LF+ L ++L HFN+
Sbjct: 384 DPEKFKPEHFLNE-NGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPL 442
Query: 559 SDEPLPAVT-VLDGVTLAPAPYK 580
D ++ + G P YK
Sbjct: 443 VDPKDIDLSPIHIGFGCIPPRYK 465
Score = 219 bits (560), Expect = 6e-64
Identities = 59/186 (31%), Positives = 104/186 (55%), Gaps = 7/186 (3%)
Query: 8 EIVSDHKKNTDKFY--DLVSAYIEEM-KARSNKTSSFSDDQLLVLLLDLFMAGSETTSNS 64
E V +H ++ D DL + EM K + + ++ D + V + DLF AG+ETTS +
Sbjct: 227 ERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTT 286
Query: 65 LSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHGNTAPIG 121
L + +L L++YP ++ K+ EEID ++ P I DR + PY++A + EI R P
Sbjct: 287 LRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSN 346
Query: 122 VAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 181
+ H A + + Y+IP+ ++++ L S++ D + + DP+ F+PE F++ +G+ Y +
Sbjct: 347 LPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNE-NGKFKYSDY 405
Query: 182 LIPFGL 187
PF
Sbjct: 406 FKPFST 411
Score = 75.7 bits (187), Expect = 1e-14
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
PGP LP++G + + K A+R+GP+ L +G R++++ G+KAV+E
Sbjct: 13 PGPFPLPIIGNLFQL-----ELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKE 67
Query: 687 VLTR--DEFDGRPSGYFFRL 704
L DEF GR F
Sbjct: 68 ALLDYKDEFSGRGDLPAFHA 87
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 253 bits (649), Expect = 1e-76
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 5/203 (2%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
L++ L+LF+ G+ET S +L + L L+++P V+ K+ EEID N++P DR
Sbjct: 265 YLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDR 324
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
K PY+EA I EI R G+ P+ +A R K ++ + +P+ + + L S++RD +
Sbjct: 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIP 558
+P F P+ F++ G+ + +PF +GKR C GE +AR LF+F ++++ +F +
Sbjct: 385 NPQDFNPQHFLNE-KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS 443
Query: 559 SDEPLPAVT-VLDGVTLAPAPYK 580
V+ G P Y
Sbjct: 444 QSPKDIDVSPKHVGFATIPRNYT 466
Score = 219 bits (560), Expect = 6e-64
Identities = 54/185 (29%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 8 EIVSDHKKNTDKFY--DLVSAYIEEM-KARSNKTSSFSDDQLLVLLLDLFMAGSETTSNS 64
+ V +++ D D + +++ M + N + F L++ L+LF+ G+ET S +
Sbjct: 228 KKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTT 287
Query: 65 LSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHGNTAPIG 121
L + L L+++P V+ K+ EEID N++P DR K PY+EA I EI R G+ P+
Sbjct: 288 LRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMS 347
Query: 122 VAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 181
+A R K ++ + +P+ + + L S++RD + +P F P+ F++ G+ +
Sbjct: 348 LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE-KGQFKKSDA 406
Query: 182 LIPFG 186
+PF
Sbjct: 407 FVPFS 411
Score = 75.3 bits (186), Expect = 2e-14
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
PGP+ LP +G YL+ + Y + RYGP+ + LG R++++ G AVRE
Sbjct: 13 PGPTPLPFIGNYLQL-----NTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 687 VLTR--DEFDGRPSGYFFRL 704
L +EF GR F
Sbjct: 68 ALVDQAEEFSGRGEQATFDW 87
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 253 bits (648), Expect = 1e-76
Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 5/203 (2%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
T + L +DLF AG+ETTS +L +++L L+++P V K+QEEI+ N+ P + DR
Sbjct: 266 TIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR 325
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
PY +A + E+ R+ + P + H + +Y+IP+ + IL++L S++ D + +
Sbjct: 326 SHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFP 385
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIP 558
+P++F P F+ G + +PF GKR C+GE +A LF+FL+S+L +FN+
Sbjct: 386 NPEMFDPHHFLDE-GGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSL 444
Query: 559 SD-EPLPAVTVLDGVTLAPAPYK 580
D + L V++G P Y+
Sbjct: 445 VDPKNLDTTPVVNGFASVPPFYQ 467
Score = 218 bits (558), Expect = 1e-63
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 7/186 (3%)
Query: 8 EIVSDHKKNTDKFY--DLVSAYIEEM-KARSNKTSSFSDDQLLVLLLDLFMAGSETTSNS 64
E V +H+++ D D + ++ +M K + N+ S F+ + L +DLF AG+ETTS +
Sbjct: 229 EKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTT 288
Query: 65 LSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHGNTAPIG 121
L +++L L+++P V K+QEEI+ N+ P + DR PY +A + E+ R+ + P
Sbjct: 289 LRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTS 348
Query: 122 VAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 181
+ H + +Y+IP+ + IL++L S++ D + + +P++F P F+ G +
Sbjct: 349 LPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDE-GGNFKKSKY 407
Query: 182 LIPFGL 187
+PF
Sbjct: 408 FMPFSA 413
Score = 75.3 bits (186), Expect = 2e-14
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
PGP+ LPV+G L+ K N ++ YGP+ L G I+++ G++AV+E
Sbjct: 14 PGPTPLPVIGNILQI-----GIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKE 68
Query: 687 VLTR--DEFDGRPSGYFFRL 704
L +EF GR
Sbjct: 69 ALIDLGEEFSGRGIFPLAER 88
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 251 bits (643), Expect = 6e-76
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 5/203 (2%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDR 438
L++ +L LF AG+ETTS +L + L +++YPHV ++Q+EI+ ++ P + DR
Sbjct: 265 HHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDR 324
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
K PY +A I EI R G+ P GV H K ++ YVIP+++ + L S + D ++
Sbjct: 325 AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFE 384
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIP 558
P+ F P F+ +G + +E +PF LGKR CLGE +ART LF+F +++L +F+I+ P
Sbjct: 385 TPNTFNPGHFLDA-NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
Query: 559 SDEPLPAVT-VLDGVTLAPAPYK 580
+T GV P Y+
Sbjct: 444 VPPEDIDLTPRESGVGNVPPSYQ 466
Score = 220 bits (564), Expect = 2e-64
Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 7/186 (3%)
Query: 8 EIVSDHKKNTDKFY--DLVSAYIEEM-KARSNKTSSFSDDQLLVLLLDLFMAGSETTSNS 64
+ V H+ D D + Y+ M K +S+ +S F L++ +L LF AG+ETTS +
Sbjct: 228 QSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTT 287
Query: 65 LSFSVLYLIRYPHVQRKIQEEIDS---LNKEPTILDRYKCPYLEATIMEIMRHGNTAPIG 121
L + L +++YPHV ++Q+EI+ ++ P + DR K PY +A I EI R G+ P G
Sbjct: 288 LRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFG 347
Query: 122 VAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 181
V H K ++ YVIP+++ + L S + D ++ P+ F P F+ +G + +E
Sbjct: 348 VPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA-NGALKRNEG 406
Query: 182 LIPFGL 187
+PF L
Sbjct: 407 FMPFSL 412
Score = 75.3 bits (186), Expect = 2e-14
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
PGPS LPV+G L+ K +YG + + LG ++++ G A+RE
Sbjct: 13 PGPSPLPVLGNLLQM-----DRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 687 VLTR--DEFDGRPSGYFFRLRALGR 709
L + F GR G
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIFQGY 92
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 200 bits (511), Expect = 4e-57
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDR 438
+ +L + +L +A ETT+NSL + + L R P QR++ +E+ S+ N+ P D
Sbjct: 280 SKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDL 339
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
PYL+A + E MR + P K + LG Y +P+ +++ +N + ++++
Sbjct: 340 RNMPYLKACLKESMRLTPSVP-FTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFE 398
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIP 558
D FRPER++ + + +PFG+GKR C+G +A L + L ++ ++I
Sbjct: 399 DSHKFRPERWLQ--KEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVAT 456
Query: 559 SDEPLPAVTVLDGVTLAPAPYK 580
+EP+ + G+ +
Sbjct: 457 DNEPVE--MLHLGILVPSRELP 476
Score = 169 bits (431), Expect = 5e-46
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 1 MWRADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKT------------SSFSDDQLLV 48
+ + T++ H D + V I+ R ++ S +L
Sbjct: 227 LHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPGADFLCDIYQQDHLSKKELYA 286
Query: 49 LLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLE 105
+ +L +A ETT+NSL + + L R P QR++ +E+ S+ N+ P D PYL+
Sbjct: 287 AVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLK 346
Query: 106 ATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRP 165
A + E MR + P K + LG Y +P+ +++ +N + ++++ D FRP
Sbjct: 347 ACLKESMRLTPSVP-FTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRP 405
Query: 166 ERFIHPTSGEVLYDETLIPFG 186
ER++ + + +PFG
Sbjct: 406 ERWLQ--KEKKINPFAHLPFG 424
Score = 56.2 bits (136), Expect = 2e-08
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 625 NVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAV 684
++PGP+ P++G LE K H + E Y ++YG I ++LG + + +
Sbjct: 25 DLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAE-YHKKYGQIFRMKLGSFDSVHLGSPSLL 83
Query: 685 REVL-TRDEFDGRPS 698
+ T R
Sbjct: 84 EALYRTESAHPQRLE 98
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 169 bits (429), Expect = 1e-45
Identities = 43/214 (20%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 367 VLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEI 426
+L + +++ + + + ++ G +TTS +L + + + R VQ ++ E+
Sbjct: 261 ILYRLLGDSKMS----FEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV 316
Query: 427 DSL---NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSII 483
+ + P L+A+I E +R + + + L Y+IP +++
Sbjct: 317 LAARHQAQGDMATMLQLVPLLKASIKETLRLHPISV-TLQRYLVNDLVLRDYMIPAKTLV 375
Query: 484 LVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLF 543
V ++++ R+ + DP+ F P R++ + + + FG G R+CLG +A +
Sbjct: 376 QVAIYALGREPTFFFDPENFDPTRWLS--KDKNITYFRNLGFGWGVRQCLGRRIAELEMT 433
Query: 544 IFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPA 577
IFL ++L +F + I + + L P
Sbjct: 434 IFLINMLENFRVEIQHLSDVGTTF---NLILMPE 464
Score = 144 bits (365), Expect = 5e-37
Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 23/206 (11%)
Query: 1 MWRADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLL---------- 50
++R +T+ DH D + Y + + S D +L
Sbjct: 214 LFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMSF 273
Query: 51 -------LDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYK 100
++ G +TTS +L + + + R VQ ++ E+ + +
Sbjct: 274 EDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQL 333
Query: 101 CPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
P L+A+I E +R + + + L Y+IP +++ V ++++ R+ + DP
Sbjct: 334 VPLLKASIKETLRLHPISV-TLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDP 392
Query: 161 DVFRPERFIHPTSGEVLYDETLIPFG 186
+ F P R++ + + + FG
Sbjct: 393 ENFDPTRWLS--KDKNITYFRNLGFG 416
Score = 46.5 bits (111), Expect = 2e-05
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVR 685
+P P + Y + + + + V ++YGPI +LG + V + V
Sbjct: 11 IPSPGDNGWLNLYHFWRETGTHKVHLHHV--QNFQKYGPIYREKLGNVESVYVIDPEDVA 68
Query: 686 EVL 688
+
Sbjct: 69 LLF 71
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 162 bits (412), Expect = 2e-43
Identities = 41/210 (19%), Positives = 73/210 (34%), Gaps = 31/210 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL------------ 429
D + L + A T + +S+ +IR P + EE+
Sbjct: 254 DDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEG 313
Query: 430 -NKEPTILDRYKCPYLEATIMEIMR-HGNTAPIGVAHRAMK----TSRLGSYVIPQDSII 483
+ + P L++ I E +R + A + GSY I +D II
Sbjct: 314 NPICLSQAELNDLPVLDSIIKESLRLS---SASLNIRTAKEDFTLHLEDGSYNIRKDDII 370
Query: 484 LVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDE---------TLIPFGLGKRRCLG 534
+ + D E + DP F+ +R++ +G+ +PFG G C G
Sbjct: 371 ALYPQLMHLDPEIYPDPLTFKYDRYL-DENGKTKTTFYCNGLKLKYYYMPFGSGATICPG 429
Query: 535 EPMARTSLFIFLSSLLYHFNISIPSDEPLP 564
A + FL +L +F + + +
Sbjct: 430 RLFAIHEIKQFLILMLSYFELELIEGQAKC 459
Score = 132 bits (335), Expect = 4e-33
Identities = 37/206 (17%), Positives = 72/206 (34%), Gaps = 35/206 (16%)
Query: 8 EIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSF 67
+ ++ + + +L+S + S+F D + L + A T + +
Sbjct: 224 SLRHENLQKRESISELISLRMFLND----TLSTFDDLEKAKTHLVVLWASQANTIPATFW 279
Query: 68 SVLYLIRYPHVQRKIQEEIDSL-------------NKEPTILDRYKCPYLEATIMEIMR- 113
S+ +IR P + EE+ + + P L++ I E +R
Sbjct: 280 SLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRL 339
Query: 114 HGNTAPIGVAHRAMK----TSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFI 169
+ A + GSY I +D II + + D E + DP F+ +R++
Sbjct: 340 S---SASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYL 396
Query: 170 HPTSGEVLYDE---------TLIPFG 186
+G+ +PFG
Sbjct: 397 -DENGKTKTTFYCNGLKLKYYYMPFG 421
Score = 55.1 bits (133), Expect = 5e-08
Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 619 KKSHRLNVPGPS-WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIIL 677
++ P + +P +GC L+F +L R++G + +L +
Sbjct: 8 RRRQTGEPPLENGLIPYLGCALQFGANP----LEFL--RANQRKHGHVFTCKLMGKYVHF 61
Query: 678 VSGFKAVREVL-TRDEFDGRPSGYFFRLRALGRR 710
++ + +VL FD + + +A G R
Sbjct: 62 ITNPLSYHKVLCHGKYFDWKKFHFATSAKAFGHR 95
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 160 bits (406), Expect = 1e-42
Identities = 29/222 (13%), Positives = 68/222 (30%), Gaps = 18/222 (8%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ +L + + + YL+ +P R ++EEI +
Sbjct: 250 DAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQGGKHLRLEERQKNT 309
Query: 442 PYLEATIMEIMR-HGNTAPIGVAHRAMK-----TSRLGSYVIPQDSIILVNLW-SIMRDQ 494
P ++ + E +R A + + S Y + + + V + S D
Sbjct: 310 PVFDSVLWETLRLT---AAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDP 366
Query: 495 EHWGDPDVFRPERFI--------HPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFL 546
+ P++F+ +RF+ +P+G C G A ++ +
Sbjct: 367 QIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELV 426
Query: 547 SSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPGELYPK 588
++L F++ + + E+ +
Sbjct: 427 FTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYR 468
Score = 130 bits (328), Expect = 3e-32
Identities = 25/203 (12%), Positives = 65/203 (32%), Gaps = 26/203 (12%)
Query: 2 WRADK--TEIVSDHK-KNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGS 58
A + + ++ + + +Y+++++ + +L
Sbjct: 212 SAAREKLWKWLTPSGLDRKPREQSWLGSYVKQLQD-----EGIDAEMQRRAMLLQLWVTQ 266
Query: 59 ETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMR-HGNT 117
+ + + YL+ +P R ++EEI + P ++ + E +R
Sbjct: 267 GNAGPAAFWVMGYLLTHPEALRAVREEIQGGKHLRLEERQKNTPVFDSVLWETLRLT--- 323
Query: 118 APIGVAHRAMK-----TSRLGSYVIPQDSIILVNLW-SIMRDQEHWGDPDVFRPERFI-- 169
A + + S Y + + + V + S D + P++F+ +RF+
Sbjct: 324 AAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNA 383
Query: 170 ------HPTSGEVLYDETLIPFG 186
+P+G
Sbjct: 384 DRTEKKDFFKNGARVKYPSVPWG 406
Score = 46.9 bits (112), Expect = 2e-05
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 9/90 (10%)
Query: 610 ITGPLLNLFKKSHRLNVPGPS-WLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGL 668
T +L + R P +P +G LEF + +L ++G I +
Sbjct: 4 KTSSVLYGRRTRRRNEPPLDKGMIPWLGHALEFGKDA----AKFL--TRMKEKHGDIFTV 57
Query: 669 RLGRDRIILVSGFKAVREVLTRDEFDGRPS 698
R I ++ VL+ +
Sbjct: 58 RAAGLYITVLLDSNCYDAVLS--DVASLDQ 85
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 156 bits (397), Expect = 1e-41
Identities = 42/199 (21%), Positives = 82/199 (41%), Gaps = 5/199 (2%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDR 438
+ D++ + + + AG T+S + S++++ L+R+ + +E+D L + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 439 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
+ P LE + E +R I + A + + I + ++ + R E +
Sbjct: 302 RQIPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFP 360
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIP 558
DP F P R+ P ++L T IPFG G+ RC+G A + S LL + +
Sbjct: 361 DPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMA 420
Query: 559 SDEPLPAVTVLDGVTLAPA 577
+ + A
Sbjct: 421 QPPESY-RNDHSKMVVQLA 438
Score = 127 bits (322), Expect = 1e-31
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 40 SFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTIL 96
FS D++ + + + AG T+S + S++++ L+R+ + +E+D L + +
Sbjct: 240 RFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFH 299
Query: 97 DRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEH 156
+ P LE + E +R I + A + + I + ++ + R E
Sbjct: 300 ALRQIPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPED 358
Query: 157 WGDPDVFRPERFIHPTSGEVLYDETLIPFG 186
+ DP F P R+ P ++L T IPFG
Sbjct: 359 FPDPHDFVPARYEQPRQEDLLNRWTWIPFG 388
Score = 50.8 bits (122), Expect = 1e-06
Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 7/86 (8%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
G EF + G + +L +++L+SG A
Sbjct: 8 RVSGGHDEHGHLEEFRTDPIGL------MQRVRDELGDVGTFQLAGKQVVLLSGSHANEF 61
Query: 687 VLTRDEFD-GRPSGYFFRLRALGRRL 711
+ D + Y F G +
Sbjct: 62 FFRAGDDDLDQAKAYPFMTPIFGEGV 87
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 157 bits (398), Expect = 2e-41
Identities = 37/223 (16%), Positives = 81/223 (36%), Gaps = 29/223 (13%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL----------NK 431
+++ L+ A + + +L+L++ P ++ E++S+
Sbjct: 259 SEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTT 318
Query: 432 EPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMK-----TSRLGSYVIPQDSIILV- 485
P L++ + E +R TA + + + + + + +L+
Sbjct: 319 TLPQKVLDSTPVLDSVLSESLRL--TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLF 376
Query: 486 NLWSIMRDQEHWGDPDVFRPERFI--------HPTSGEVLYDETLIPFGLGKRRCLGEPM 537
S RD E + DP+VF+ RF+ +P+G G CLG
Sbjct: 377 PFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSY 436
Query: 538 ARTSLFIFLSSLLYHFNISIPSDE---PLPAVTVLDGVTLAPA 577
A S+ F+ +L H ++ + + + P ++ + P
Sbjct: 437 AVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPE 479
Score = 128 bits (324), Expect = 9e-32
Identities = 31/204 (15%), Positives = 70/204 (34%), Gaps = 34/204 (16%)
Query: 7 TEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLS 66
+ + + K+ + ++EEM S++ L+ A +
Sbjct: 232 SPARLARRAHRSKWLESYLLHLEEMG--------VSEEMQARALVLQLWATQGNMGPAAF 283
Query: 67 FSVLYLIRYPHVQRKIQEEIDSL----------NKEPTILDRYKCPYLEATIMEIMRHGN 116
+ +L+L++ P ++ E++S+ P L++ + E +R
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-- 341
Query: 117 TAPIGVAHRAMK-----TSRLGSYVIPQDSIILV-NLWSIMRDQEHWGDPDVFRPERFI- 169
TA + + + + + + +L+ S RD E + DP+VF+ RF+
Sbjct: 342 TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLN 401
Query: 170 -------HPTSGEVLYDETLIPFG 186
+P+G
Sbjct: 402 PDGSEKKDFYKDGKRLKNYNMPWG 425
Score = 51.7 bits (124), Expect = 5e-07
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 9/101 (8%)
Query: 614 LLNLFKKSHRLNVPG-PSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGR 672
LL+ + P +P +G L+F + + F ++G I + +G
Sbjct: 8 LLSRRRTRRPGEPPLDLGSIPWLGYALDFGKDAASF------LTRMKEKHGDIFTILVGG 61
Query: 673 DRIILVSGFKAVREVL--TRDEFDGRPSGYFFRLRALGRRL 711
+ ++ + V+ R D F R +L
Sbjct: 62 RYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIFDVQL 102
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 154 bits (391), Expect = 9e-41
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL--NKEPTILDRY 439
+ +L +L L AG ET +++LS L L ++ ++ ++++E + L ++E T
Sbjct: 240 SLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLK 299
Query: 440 KCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 499
K PYL+ + E++R G ++ + + P+ ++ + D + + D
Sbjct: 300 KMPYLDQVLQEVLRLIPPVG-GGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPD 358
Query: 500 PDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPS 559
P+ F PERF S +PFG G R CLG+ AR + +F + L+ F+ ++
Sbjct: 359 PEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLP 418
Query: 560 DEPLPAVTVLDGVTLAPA 577
+ L V + P
Sbjct: 419 GQNLELVV---TPSPRPK 433
Score = 135 bits (341), Expect = 4e-34
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 8 EIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSF 67
+I+ ++ D + + AR + S +L +L L AG ET +++LS
Sbjct: 209 KIIKARQQQPPSEEDALGILLA---ARDDNNQPLSLPELKDQILLLLFAGHETLTSALSS 265
Query: 68 SVLYLIRYPHVQRKIQEEIDSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR 125
L L ++ ++ ++++E + L ++E T K PYL+ + E++R G
Sbjct: 266 FCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVG-GGFRE 324
Query: 126 AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPF 185
++ + + P+ ++ + D + + DP+ F PERF S +PF
Sbjct: 325 LIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPF 384
Query: 186 G 186
G
Sbjct: 385 G 385
Score = 50.8 bits (122), Expect = 9e-07
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 626 VPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVR 685
PG LP +G L F + +++GPI RL +I +SG A R
Sbjct: 14 PPGDFGLPWLGETLNFLNDGDFG-------KKRQQQFGPIFKTRLFGKNVIFISGALANR 66
Query: 686 EVLTRDEFDGRPSGYFFRLRALGRR 710
+ T+++ + + LG
Sbjct: 67 FLFTKEQETFQATWPLSTRILLGPN 91
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 141 bits (357), Expect = 4e-36
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL--NKEPTILDRY 439
+ ++ ++ + GSET ++++ + + L +P +I++E++++ + D
Sbjct: 260 GEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVR 319
Query: 440 KCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 499
K + I+E MR + + RA+ S LG Y IP + I+ + ++I RD + + D
Sbjct: 320 KLRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDD 378
Query: 500 PDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPS 559
F P+R+ P + + PF GKR+C + + L + ++L + +
Sbjct: 379 NLEFDPDRW-LPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVA 437
Query: 560 DEPLPAVTVLDGVTLAPAP 578
G+TL P
Sbjct: 438 GSNDAVRV---GITLRPHD 453
Score = 123 bits (310), Expect = 5e-30
Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 7 TEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLS 66
EI+++ + + K DL++A ++A+ + + ++ ++ + GSET ++++
Sbjct: 228 DEIIAERRASGQKPDDLLTAL---LEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIM 284
Query: 67 FSVLYLIRYPHVQRKIQEEIDSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAH 124
+ + L +P +I++E++++ + D K + I+E MR + +
Sbjct: 285 WLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWV-LTR 343
Query: 125 RAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIP 184
RA+ S LG Y IP + I+ + ++I RD + + D F P+R+ P + + P
Sbjct: 344 RAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRW-LPERAANVPKYAMKP 402
Query: 185 FG 186
F
Sbjct: 403 FS 404
Score = 52.3 bits (126), Expect = 3e-07
Identities = 11/84 (13%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
+P++G +R F + R +G + ++LG + V+ +
Sbjct: 26 VAGGGVPLLGHGWRLARDPLAF-------MSQLRDHGDVVRIKLGPKTVYAVTNPELTGA 78
Query: 687 VLTRDEFDGRPSGYFFRLRALGRR 710
+ ++ + LG+
Sbjct: 79 LALNPDYHIAGPLWESLEGLLGKE 102
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 137 bits (348), Expect = 3e-35
Identities = 37/187 (19%), Positives = 63/187 (33%), Gaps = 23/187 (12%)
Query: 380 ECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRY 439
D ++ + L + S L FS L L +P + ++
Sbjct: 226 SQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSGNS------------ 273
Query: 440 KCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 499
E + E+ R+ P + K + + + +L++L+ D W
Sbjct: 274 --REREMFVQEVRRYYPFGP-FLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDH 330
Query: 500 PDVFRPERFIHPTSGEVLYDETLIPFGLG----KRRCLGEPMARTSLFIFLSSLLYHFNI 555
PD FRPERF + +IP G G RC GE + + L L++
Sbjct: 331 PDEFRPERF----AEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEY 386
Query: 556 SIPSDEP 562
+P
Sbjct: 387 DVPEQSL 393
Score = 110 bits (278), Expect = 3e-26
Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 20/156 (12%)
Query: 31 MKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLN 90
S + L+++ S L FS L L +P + ++
Sbjct: 218 AFHTQEDGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSGNS--- 273
Query: 91 KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSI 150
E + E+ R+ P + K + + + +L++L+
Sbjct: 274 -----------REREMFVQEVRRYYPFGP-FLGALVKKDFVWNNCEFKKGTSVLLDLYGT 321
Query: 151 MRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFG 186
D W PD FRPERF + +IP G
Sbjct: 322 NHDPRLWDHPDEFRPERF----AEREENLFDMIPQG 353
Score = 39.3 bits (92), Expect = 0.004
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 8/83 (9%)
Query: 625 NVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAV 684
+P + L + F + R + RL I ++G +A
Sbjct: 4 QIPH---DKSLDNSLTLLKEGYLF-----IKNRTERYNSDLFQARLLGKNFICMTGAEAA 55
Query: 685 REVLTRDEFDGRPSGYFFRLRAL 707
+ D F + + ++L
Sbjct: 56 KVFYDTDRFQRQNALPKRVQKSL 78
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 137 bits (346), Expect = 9e-35
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 10/189 (5%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL----NKEPTILD 437
TDD++ +L+ L +AG T+S + ++ +L R +Q+K E ++ T
Sbjct: 249 TDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQ 308
Query: 438 RYKCPYLEATIMEIMR-HGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQE 495
L+ I E +R PI + R A + Y IP + V+ R ++
Sbjct: 309 LKDLNLLDRCIKETLRLR---PPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKD 365
Query: 496 HWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNI 555
W + F P+R++ + +PFG G+ RC+GE A + S++L +
Sbjct: 366 SWVERLDFNPDRYL-QDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
Query: 556 SIPSDEPLP 564
+
Sbjct: 425 DLIDGYFPT 433
Score = 117 bits (296), Expect = 3e-28
Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 13/185 (7%)
Query: 8 EIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSF 67
+ + +++ +K D++ + A +DD++ +L+ L +AG T+S + ++
Sbjct: 218 KAIQKRRQSQEKIDDILQTL---LDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAW 274
Query: 68 SVLYLIRYPHVQRKIQEEIDSL----NKEPTILDRYKCPYLEATIMEIMR-HGNTAPIGV 122
+L R +Q+K E ++ T L+ I E +R PI +
Sbjct: 275 MGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLR---PPIMI 331
Query: 123 AHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDET 181
R A + Y IP + V+ R ++ W + F P+R++ +
Sbjct: 332 MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL-QDNPASGEKFA 390
Query: 182 LIPFG 186
+PFG
Sbjct: 391 YVPFG 395
Score = 46.5 bits (111), Expect = 2e-05
Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 8/87 (9%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKAVRE 686
S +P +G + F + +F EN +YGP+ + + G A
Sbjct: 15 YIFSPIPFLGHAIAFGKSPIEF------LENAYEKYGPVFSFTMVGKTFTYLLGSDAAAL 68
Query: 687 VLTRD--EFDGRPSGYFFRLRALGRRL 711
+ + + G+ +
Sbjct: 69 LFNSKNEDLNAEDVYSRLTTPVFGKGV 95
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 137 bits (346), Expect = 1e-34
Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL--NKEPTILDRY 439
T + + +L++ +A +T S SL F + + ++P+V+ I +EI ++ ++ I D
Sbjct: 292 TRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQ 351
Query: 440 KCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 499
K +E I E MR+ + V +A++ + Y + + + I++N+ + R E +
Sbjct: 352 KLKVMENFIYESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPK 409
Query: 500 PDVFRPERF---IHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNIS 556
P+ F E F + PFG G R C G+ +A + L +LL F++
Sbjct: 410 PNEFTLENFAKNVPYRY--------FQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVK 461
Query: 557 IPSDEPLPAVTVLDGVTLAPAPYKAP 582
+ + ++ + ++L P K
Sbjct: 462 TLQGQCVESIQKIHDLSLHPDETKNM 487
Score = 113 bits (284), Expect = 1e-26
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 35 SNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL--NKE 92
+ K + + + +L++ +A +T S SL F + + ++P+V+ I +EI ++ ++
Sbjct: 285 AEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD 344
Query: 93 PTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMR 152
I D K +E I E MR+ + V +A++ + Y + + + I++N+ + R
Sbjct: 345 IKIDDIQKLKVMENFIYESMRYQPVVDL-VMRKALEDDVIDGYPVKKGTNIILNIGRMHR 403
Query: 153 DQEHWGDPDVFRPERF---IHPTSGEVLYDETLIPFG 186
E + P+ F E F + PFG
Sbjct: 404 L-EFFPKPNEFTLENFAKNVPYRY--------FQPFG 431
Score = 54.7 bits (132), Expect = 6e-08
Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Query: 614 LLNLFKKSHRLNVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRD 673
L ++ ++PGP + +G + R L C Y R YG + + +
Sbjct: 35 FLLVWNYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGS--ACNYYNRVYGEFMRVWISGE 92
Query: 674 RIILVSGFKAVREVLTRDEFDGRPSGYFFRLRALG 708
+++S ++ ++ + + G L+ +G
Sbjct: 93 ETLIISKSSSMFHIMKHNHYS-SRFGSKLGLQCIG 126
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 134 bits (340), Expect = 7e-34
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 391 LDLFM-AGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL--NKEPTILDRYKCPYLEAT 447
+ F+ AG ETTS LSF++ +L++ PHV +K EE + + P+ + Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 448 IMEIMRHGNTAPIGVAHRAMKTSRL-GSYVIPQDSIILVNLWSIMRDQEHWG-DPDVFRP 505
+ E +R TAP + A + + L G Y + + ++V + + RD+ WG D + FRP
Sbjct: 318 LNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 506 ERF-----IHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSD 560
ERF I + PFG G+R C+G+ A + L +L HF+ ++
Sbjct: 377 ERFENPSAIPQHA--------FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTN 428
Query: 561 EPLPAVTVLDGVTLAP 576
L L TL P
Sbjct: 429 YELDIKETL---TLKP 441
Score = 119 bits (300), Expect = 1e-28
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 22/192 (11%)
Query: 8 EIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFM-AGSETTSNSLS 66
+I++D K + ++ DL++ + + +T DD+ + + F+ AG ETTS LS
Sbjct: 218 KIIADRKASGEQSDDLLTHMLN---GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLS 274
Query: 67 FSVLYLIRYPHVQRKIQEEIDSL--NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAH 124
F++ +L++ PHV +K EE + + P+ + Y+ + E +R TAP +
Sbjct: 275 FALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP-AFSL 333
Query: 125 RAMKTSRL-GSYVIPQDSIILVNLWSIMRDQEHWG-DPDVFRPERF-----IHPTSGEVL 177
A + + L G Y + + ++V + + RD+ WG D + FRPERF I +
Sbjct: 334 YAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA---- 389
Query: 178 YDETLIPFGLDP 189
PFG
Sbjct: 390 ----FKPFGNGQ 397
Score = 46.1 bits (110), Expect = 3e-05
Identities = 11/84 (13%), Positives = 20/84 (23%), Gaps = 9/84 (10%)
Query: 626 VPGPSWLPVVGCYLEFSR--LLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFKA 683
+P P + + + A G I +S +
Sbjct: 5 MPQPKTFGELKNLPLLNTDKPVQAL-------MKIADELGEIFKFEAPGRVTRYLSSQRL 57
Query: 684 VREVLTRDEFDGRPSGYFFRLRAL 707
++E FD S +R
Sbjct: 58 IKEACDESRFDKNLSQALKFVRDF 81
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 132 bits (335), Expect = 2e-33
Identities = 40/206 (19%), Positives = 87/206 (42%), Gaps = 17/206 (8%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR--KIQEEIDSLNKEPTILDRY 439
+ ++ +++ AG T+S + ++S+L+L+ +V+ +++EI+ + +
Sbjct: 250 SLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVM 309
Query: 440 -KCPYLEATIMEIMR-HGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEH 496
+ P+ E E +R P+ + R M ++GSYV+P+ II + D+E
Sbjct: 310 DEMPFAERCARESIRRD---PPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 366
Query: 497 WGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNIS 556
+ +P + PER I FG G +C+G+ + L++ ++
Sbjct: 367 FPEPRRWDPERDEKVEG-------AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 419
Query: 557 IPSDEPLPAVTVLDGVTLAPAPYKAP 582
+ DE + + P +
Sbjct: 420 LLRDEVPD--PDYHTMVVGPTASQCR 443
Score = 109 bits (274), Expect = 2e-25
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 31 MKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQR--KIQEEIDS 88
+ A + S ++ +++ AG T+S + ++S+L+L+ +V+ +++EI+
Sbjct: 239 LSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEE 298
Query: 89 LNKEPTILDRY-KCPYLEATIMEIMR-HGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILV 145
+ + + P+ E E +R P+ + R M ++GSYV+P+ II
Sbjct: 299 FPAQLNYNNVMDEMPFAERCARESIRRD---PPLLMLMRKVMADVKVGSYVVPKGDIIAC 355
Query: 146 NLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFG 186
+ D+E + +P + PER I FG
Sbjct: 356 SPLLSHHDEEAFPEPRRWDPERDEKVEG-------AFIGFG 389
Score = 47.3 bits (113), Expect = 1e-05
Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Query: 623 RLNVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGFK 682
+L P +P++G ++F + F + E + I + + R+ +V
Sbjct: 3 KLPPVYPVTVPILGHIIQFGKSPLGF-----MQECKRQLKSGIFTINIVGKRVTIVGDPH 57
Query: 683 AVREVL-TRDEFDGRPSGYFFRLRALGRRL 711
R+E Y F + G +
Sbjct: 58 EHSRFFLPRNEVLSPREVYSFMVPVFGEGV 87
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 128 bits (323), Expect = 5e-32
Identities = 37/219 (16%), Positives = 67/219 (30%), Gaps = 29/219 (13%)
Query: 364 DKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQ 423
T I + + + + L + + + ++F L ++ +
Sbjct: 209 SGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALV 268
Query: 424 EEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSII 483
++ Y E + E+ R P V RA + P+ +
Sbjct: 269 QQP---------------DYAELFVQEVRRFYPFFP-AVVARASQDFEWEGMAFPEGRQV 312
Query: 484 LVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLG----KRRCLGEPMAR 539
+++L+ D W DP FRPERF IP G G RC GE +
Sbjct: 313 VLDLYGSNHDAATWADPQEFRPERF----RAWDEDSFNFIPQGGGDHYLGHRCPGEWIVL 368
Query: 540 TSLFIFLSSLLYHFNISIP-SDEPLPAVTVLDGVTLAPA 577
+ + L+ +P D + + P
Sbjct: 369 AIMKVAAHLLVNAMRYDVPDQDLSID----FARLPALPK 403
Score = 100 bits (251), Expect = 9e-23
Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 20/156 (12%)
Query: 31 MKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLN 90
+ ++ + + L + + + ++F L ++ + ++
Sbjct: 216 IAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALVQQP---- 271
Query: 91 KEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSI 150
Y E + E+ R P V RA + P+ ++++L+
Sbjct: 272 -----------DYAELFVQEVRRFYPFFP-AVVARASQDFEWEGMAFPEGRQVVLDLYGS 319
Query: 151 MRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFG 186
D W DP FRPERF IP G
Sbjct: 320 NHDAATWADPQEFRPERF----RAWDEDSFNFIPQG 351
Score = 38.1 bits (89), Expect = 0.008
Identities = 11/82 (13%), Positives = 18/82 (21%), Gaps = 8/82 (9%)
Query: 627 PGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGP-ITGLRLGRDRIILVSGFKAVR 685
P L +F +R G R + + G KA
Sbjct: 3 KTPH-TKGPDETLSLLADPYRF------ISRQCQRLGANAFESRFLLKKTNCLKGAKAAE 55
Query: 686 EVLTRDEFDGRPSGYFFRLRAL 707
F+ + + L
Sbjct: 56 IFYDTTRFEREGAMPVAIQKTL 77
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 128 bits (325), Expect = 6e-32
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 21/195 (10%)
Query: 391 LDLFM-AGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEA 446
F AG ET++N L+F+V+ L R P + ++Q E+D + + D + YL
Sbjct: 248 FVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQ 307
Query: 447 TIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPE 506
+ E +R A + + + +P ++ +L + + + R ++ DP F P+
Sbjct: 308 VLKESLRLYPPAWG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPD 366
Query: 507 RF-----IHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDE 561
RF + Y PF LG R C+G+ A+ + + ++ LL + +
Sbjct: 367 RFGPGAPKPRFT----Y----FPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ 418
Query: 562 PLPAVTVLDGVTLAP 576
TL P
Sbjct: 419 RFGLQEQA---TLKP 430
Score = 114 bits (288), Expect = 3e-27
Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 33/201 (16%)
Query: 13 HKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLL---------------LDLFM-A 56
+++ + +++ + + D L +L F A
Sbjct: 195 VRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIA 254
Query: 57 GSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSL---NKEPTILDRYKCPYLEATIMEIMR 113
G ET++N L+F+V+ L R P + ++Q E+D + + D + YL + E +R
Sbjct: 255 GHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLR 314
Query: 114 HGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERF----- 168
A + + + +P ++ +L + + + R ++ DP F P+RF
Sbjct: 315 LYPPAWG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP 373
Query: 169 IHPTSGEVLYDETLIPFGLDP 189
+ Y PF L
Sbjct: 374 KPRFT----Y----FPFSLGH 386
Score = 36.8 bits (86), Expect = 0.022
Identities = 11/55 (20%), Positives = 28/55 (50%)
Query: 657 NYARRYGPITGLRLGRDRIILVSGFKAVREVLTRDEFDGRPSGYFFRLRALGRRL 711
++A++YGP+ + + ++V+ ++V++ L +++ Y G RL
Sbjct: 18 DWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERL 72
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 113 bits (286), Expect = 2e-27
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
++ L + L +AG ET +++L++S L L P Q+++ E ++
Sbjct: 207 PRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEA------------- 253
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
A E +R A I + R + LG +P + ++++ + R H+ D +
Sbjct: 254 --ALAAFQEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGE 308
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNISIPSDE 561
FRPERF PFGLG+R CLG A I L + F + +
Sbjct: 309 AFRPERF---LEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL-----D 360
Query: 562 PLPAVTVLDGVTLAPA 577
PLP VL VTL P
Sbjct: 361 PLPFPRVLAQVTLRPE 376
Score = 89.6 bits (223), Expect = 3e-19
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 21/151 (13%)
Query: 39 SSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDR 98
S ++ L + L +AG ET +++L++S L L P Q+++ E ++
Sbjct: 204 SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEA---------- 253
Query: 99 YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 158
A E +R A I + R + LG +P + ++++ + R H+
Sbjct: 254 -----ALAAFQEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFP 305
Query: 159 DPDVFRPERFIHPTSGEVLYDETLIPFGLDP 189
D + FRPERF PFGL
Sbjct: 306 DGEAFRPERF---LEERGTPSGRYFPFGLGQ 333
Score = 34.9 bits (81), Expect = 0.087
Identities = 12/51 (23%), Positives = 16/51 (31%)
Query: 659 ARRYGPITGLRLGRDRIILVSGFKAVREVLTRDEFDGRPSGYFFRLRALGR 709
R P L L R + L+ + V L + Y R GR
Sbjct: 27 WGRAHPRLFLPLPRFPLALIFDPEGVEGALLAEGTTKATFQYRALSRLTGR 77
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 107 bits (269), Expect = 1e-24
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 33/188 (17%)
Query: 394 FMAGSETTSNSLSFSVLY-LIRYPHVQRKIQEEIDSL---NKEPTILDRYKC----PYLE 445
AG ETTS+ LSF ++Y L +P VQ+K+QEEID++ PT Y YL+
Sbjct: 281 IFAGYETTSSVLSF-IMYELATHPDVQQKLQEEIDAVLPNKAPPT----YDTVLQMEYLD 335
Query: 446 ATIMEIMR-HGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 503
+ E +R R K + IP+ ++++ +++ RD ++W +P+ F
Sbjct: 336 MVVNETLRLF---PIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKF 392
Query: 504 RPERF-------IHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHFNIS 556
PERF I P PFG G R C+G A ++ + L +L +F+
Sbjct: 393 LPERFSKKNKDNIDPY--------IYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
Query: 557 IPSDEPLP 564
+ +P
Sbjct: 445 PCKETQIP 452
Score = 96.5 bits (241), Expect = 3e-21
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 53/213 (24%)
Query: 14 KKNTDKFYDLVSAYIEE----------------MKARSNKTSS----FSDDQLLVLLLDL 53
++ T+ V E + ++++K + SD +L+ +
Sbjct: 221 REVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIF 280
Query: 54 FMAGSETTSNSLSFSVLY-LIRYPHVQRKIQEEIDSL---NKEPTILDRYKC----PYLE 105
AG ETTS+ LSF ++Y L +P VQ+K+QEEID++ PT Y YL+
Sbjct: 281 IFAGYETTSSVLSF-IMYELATHPDVQQKLQEEIDAVLPNKAPPT----YDTVLQMEYLD 335
Query: 106 ATIMEIMR-HGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVF 163
+ E +R R K + IP+ ++++ +++ RD ++W +P+ F
Sbjct: 336 MVVNETLRLF---PIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKF 392
Query: 164 RPERF-------IHPTSGEVLYDETLIPFGLDP 189
PERF I P PFG P
Sbjct: 393 LPERFSKKNKDNIDPY--------IYTPFGSGP 417
Score = 34.9 bits (81), Expect = 0.089
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 622 HRLNVPGPSWLPVVGCYLEFSRLLSKFKYHYLVCENYARRYGPITGLRLGRDRIILVSGF 681
+L +PGP+ LP +G L + + E + ++YG + G G+ ++ ++
Sbjct: 12 KKLGIPGPTPLPFLGNILSY-----HKGFCMFDMECH-KKYGKVWGFYDGQQPVLAITDP 65
Query: 682 KAVREVLTRDEFD 694
++ VL ++ +
Sbjct: 66 DMIKTVLVKECYS 78
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 98.0 bits (244), Expect = 1e-21
Identities = 26/218 (11%), Positives = 69/218 (31%), Gaps = 28/218 (12%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRY-PHVQRKIQEEIDSL-----NKEPTI 435
D+ + +L + ++ ++ ++ ++ EEI + T+
Sbjct: 262 KDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTL 321
Query: 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAH--RAMKT----SRLGSYVIPQDSIILVNLWS 489
+ P ++ + E +R P +A S ++ + + ++
Sbjct: 322 EAIEQMPLTKSVVYESLR---IEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPF 378
Query: 490 IMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLG---------KRRCLGEPMART 540
+D + + P+ + P+RF G+ + + G ++C G+
Sbjct: 379 ATKDPKVFDRPEEYVPDRF----VGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVL 434
Query: 541 SLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAP 578
+F+ L ++ P + L A
Sbjct: 435 ITRLFVIELFRRYDSFEIELGESPLGAAVTLTFLKRAS 472
Score = 91.5 bits (227), Expect = 1e-19
Identities = 27/201 (13%), Positives = 69/201 (34%), Gaps = 23/201 (11%)
Query: 1 MWRADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSET 60
+R I S + K D F + + +E+ + K D+ + +L +
Sbjct: 225 TFRLPAFLIKSTYNKLYDYFQSVATPVMEQAE----KLGVPKDEAVHNILFAVCFNTFGG 280
Query: 61 TSNSLSFSVLYLIRY-PHVQRKIQEEIDSL-----NKEPTILDRYKCPYLEATIMEIMRH 114
++ ++ ++ ++ EEI + T+ + P ++ + E +R
Sbjct: 281 VKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLR- 339
Query: 115 GNTAPIGVAH--RAMKT----SRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERF 168
P +A S ++ + + ++ +D + + P+ + P+RF
Sbjct: 340 --IEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRF 397
Query: 169 IHPTSGEVLYDETLIPFGLDP 189
G+ + + P
Sbjct: 398 ----VGDGEALLKYVWWSNGP 414
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 97.7 bits (243), Expect = 2e-21
Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 22/212 (10%)
Query: 389 LLLDLFMAGSETTSNSLSFSVLYLIRY-----PHVQRKIQEEIDSL----NKEPTILDRY 439
+L A T + +++ V ++ EEI S+ E T+
Sbjct: 283 ATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIE 342
Query: 440 KCPYLEATIMEIMRHGNTAPIGVAHRAMKT----SRLGSYVIPQDSIILVNLWSIMRDQE 495
K ++ + E +R RA K S ++ + ++ RD +
Sbjct: 343 KMELTKSVVYECLRFEPPVTA-QYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPK 401
Query: 496 HWGDPDVFRPERFIHPTSGEVLYDETLIPFG-------LGKRRCLGEPMARTSLFIFLSS 548
+ D F PERF+ GE L L G +G ++C G+ +F+
Sbjct: 402 IFDRADEFVPERFV-GEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIE 460
Query: 549 LLYHFNISIPSDEPLPAVTVLDGVTLAPAPYK 580
+ ++ P + ++ +L A +
Sbjct: 461 IFRRYDSFDIEVGTSPLGSSVNFSSLRKASFH 492
Score = 85.0 bits (210), Expect = 2e-17
Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 19/186 (10%)
Query: 14 KKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLI 73
K + + Y+ E+ ++K ++ +L A T + ++
Sbjct: 252 KSDYQRLYEFFLESAGEILVEADKLGISREE----ATHNLLFATCFNTWGGMKILFPNMV 307
Query: 74 RY-----PHVQRKIQEEIDSL----NKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAH 124
+ V ++ EEI S+ E T+ K ++ + E +R
Sbjct: 308 KRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTA-QYG 366
Query: 125 RAMKT----SRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDE 180
RA K S ++ + ++ RD + + D F PERF+ GE L
Sbjct: 367 RAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV-GEEGEKLLRH 425
Query: 181 TLIPFG 186
L G
Sbjct: 426 VLWSNG 431
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 80.0 bits (198), Expect = 4e-16
Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 28/184 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T D+ + L + G +T N LSFS+ +L + P ++++ E P +
Sbjct: 235 TSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIE-------RPERIP---- 283
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
A E++R + + + + IL+ D+ P
Sbjct: 284 ----AACEELLRR--FSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPM 337
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560
R + FG G CLG+ +AR + + L L + SI
Sbjct: 338 HVDFSRQKVSHTT----------FGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPG 387
Query: 561 EPLP 564
+
Sbjct: 388 AQIQ 391
Score = 63.5 bits (155), Expect = 8e-11
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 17/126 (13%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
+ D+ + L + G +T N LSFS+ +L + P ++++ E P +
Sbjct: 235 TSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIE-------RPERIP---- 283
Query: 102 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161
A E++R + + + + IL+ D+ P
Sbjct: 284 ----AACEELLRR--FSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPM 337
Query: 162 VFRPER 167
R
Sbjct: 338 HVDFSR 343
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 79.7 bits (197), Expect = 6e-16
Identities = 36/182 (19%), Positives = 59/182 (32%), Gaps = 28/182 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
D+ L+ L + G +T N LSF +++L R+P + +++ +P L
Sbjct: 241 AHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRS-------DPLKLM---- 289
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
E+ R + A K + + +IL+ D +P
Sbjct: 290 ----RGAEEMFRR--FPVVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPW 343
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560
R S FG G RC G +AR + + L L S
Sbjct: 344 KLDFSRRSISHST----------FGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEG 393
Query: 561 EP 562
E
Sbjct: 394 ET 395
Score = 62.7 bits (153), Expect = 2e-10
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 17/126 (13%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
+ D+ L+ L + G +T N LSF +++L R+P + +++ +P L
Sbjct: 241 AHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRS-------DPLKLM---- 289
Query: 102 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161
E+ R + A K + + +IL+ D +P
Sbjct: 290 ----RGAEEMFRR--FPVVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPW 343
Query: 162 VFRPER 167
R
Sbjct: 344 KLDFSR 349
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 78.4 bits (194), Expect = 1e-15
Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 34/204 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
++D L+ L + G + T+ LS L ++R++ P ++
Sbjct: 218 SEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIA-------HPELIP---- 266
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R P V + +G + ++ RD+ + PD
Sbjct: 267 ----NAVDELLRF--YGPAMVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPD 320
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560
ER + + G G RCLG + R + ++ L S+ +
Sbjct: 321 NIVIERTPNR----------HLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPN 370
Query: 561 EPLPAVT-VLDG-----VTLAPAP 578
+ + + G +
Sbjct: 371 KECEWLMGQVAGMLHVPIIFPKGK 394
Score = 62.7 bits (153), Expect = 1e-10
Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 17/126 (13%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
S+D L+ L + G + T+ LS L ++R++ P ++
Sbjct: 218 SEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIA-------HPELIP---- 266
Query: 102 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161
+ E++R P V + +G + ++ RD+ + PD
Sbjct: 267 ----NAVDELLRF--YGPAMVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPD 320
Query: 162 VFRPER 167
ER
Sbjct: 321 NIVIER 326
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 78.5 bits (194), Expect = 2e-15
Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+D +L L+L++ +A +E +L+ + +L+ P + + +++
Sbjct: 255 SDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD-------RSLVP---- 303
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
I E +R+ P+ + R + + +G I +D+I+ + + RD E + P
Sbjct: 304 ----RAIAETLRY--KPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQP 357
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559
DVF R + FG G C+G A+ + I + +L NI +
Sbjct: 358 DVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEE 417
Query: 560 DEP 562
D
Sbjct: 418 DFC 420
Score = 60.4 bits (147), Expect = 8e-10
Identities = 29/146 (19%), Positives = 59/146 (40%), Gaps = 18/146 (12%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
SD +L L+L++ +A +E +L+ + +L+ P + + +++
Sbjct: 255 SDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLA-------DRSLVP---- 303
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
I E +R+ P+ + R + + +G I +D+I+ + + RD E + P
Sbjct: 304 ----RAIAETLRY--KPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQP 357
Query: 161 DVFRPERFIHPTSGEVLYDETLIPFG 186
DVF R + FG
Sbjct: 358 DVFNIHREDLGIKSAFSGAARHLAFG 383
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 77.7 bits (192), Expect = 2e-15
Identities = 36/184 (19%), Positives = 69/184 (37%), Gaps = 26/184 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T D+ + +L G +T + + L+L R+P QR ++E P ++
Sbjct: 220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRE-------RPDLIP---- 268
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
A E+MR + V+ A+ I + ++ + D + P+
Sbjct: 269 ----AAADELMRR--YPTVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPE 322
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560
R +R + P G+G RC+G +AR + +FL L ++ D
Sbjct: 323 EVRFDRGLAPIRH--------TTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPD 374
Query: 561 EPLP 564
+ +
Sbjct: 375 KAVT 378
Score = 62.6 bits (153), Expect = 2e-10
Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 17/130 (13%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
+ D+ + +L G +T + + L+L R+P QR ++E P ++
Sbjct: 220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRE-------RPDLIP---- 268
Query: 102 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161
A E+MR + V+ A+ I + ++ + D + P+
Sbjct: 269 ----AAADELMRR--YPTVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPE 322
Query: 162 VFRPERFIHP 171
R +R + P
Sbjct: 323 EVRFDRGLAP 332
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 77.7 bits (192), Expect = 3e-15
Identities = 38/182 (20%), Positives = 61/182 (33%), Gaps = 28/182 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
DD+ L L+ L + G +T N L F ++YL R+P +++ EP L
Sbjct: 242 PDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRR-------EPLKLQ---- 290
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E+ R A + A + ++ + +IL+ D H DP
Sbjct: 291 ----RGVEELFRR--FAVVSDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPM 344
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSD 560
R S F G RC G +AR + + L L +
Sbjct: 345 TVDLSRRDVTHST----------FAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDR 394
Query: 561 EP 562
Sbjct: 395 AV 396
Score = 63.9 bits (156), Expect = 8e-11
Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 17/126 (13%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
DD+ L L+ L + G +T N L F ++YL R+P +++ EP L
Sbjct: 242 PDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRR-------EPLKLQ---- 290
Query: 102 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161
+ E+ R A + A + ++ + +IL+ D H DP
Sbjct: 291 ----RGVEELFRR--FAVVSDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPM 344
Query: 162 VFRPER 167
R
Sbjct: 345 TVDLSR 350
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein,
lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A
{Dictyostelium discoideum} PDB: 2uuv_A*
Length = 584
Score = 75.9 bits (187), Expect = 2e-14
Identities = 18/90 (20%), Positives = 34/90 (37%)
Query: 302 DPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSV 361
+ V + ++ I + G + G+ Y + YIRDF D+ D ET+V
Sbjct: 402 PKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTV 461
Query: 362 PWDKTVLLCINVKKRLTRECTDDQLLVLLL 391
+ L + K+ + D + +
Sbjct: 462 SYANLQTLWKDAKQTFVKHFKDQGIPAWIC 491
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 73.8 bits (182), Expect = 4e-14
Identities = 35/172 (20%), Positives = 69/172 (40%), Gaps = 23/172 (13%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ + L +AG+ T N ++ V L ++P +++ L P++
Sbjct: 226 DKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHP-------DQLAQLKANPSLAP---- 274
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E+ R+ + + + A + +G ++ + I+ + S RD+E + +PD
Sbjct: 275 ----QFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPD 330
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F R P + FG G RC+ E +A+ L S+L F
Sbjct: 331 EFNMNRKWPPQDP--------LGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
Score = 58.8 bits (143), Expect = 3e-09
Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
D++S K + + + L +AG+ T N ++ V L ++P
Sbjct: 210 DIISKLC----TEQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHP----- 260
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
+++ L P++ + E+ R+ + + + A + +G ++ +
Sbjct: 261 --DQLAQLKANPSLAP--------QFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANE 310
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
I+ + S RD+E + +PD F R
Sbjct: 311 GIIASNQSANRDEEVFENPDEFNMNR 336
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 73.8 bits (182), Expect = 5e-14
Identities = 31/172 (18%), Positives = 65/172 (37%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
D L+ L +A +TT+ + L+ P +++ L ++P+++
Sbjct: 223 DDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP-------DQLALLREDPSLVGN--- 272
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R+ G A + LG I + ++ ++ + D +P+
Sbjct: 273 -----AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPE 327
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F R + + FG G +C+G+ +AR L I +L
Sbjct: 328 RFDITR---RPAPHL-------AFGFGAHQCIGQQLARIELQIVFETLFRRL 369
Score = 60.7 bits (148), Expect = 7e-10
Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 19/146 (13%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL+SA I + D L+ L +A +TT+ + L+ P
Sbjct: 207 DLISALI----TTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP----- 257
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
+++ L ++P+++ + E++R+ G A + LG I +
Sbjct: 258 --DQLALLREDPSLVGN--------AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE 307
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++ ++ + D +P+ F R
Sbjct: 308 QVVAHVLAADFDPAFVEEPERFDITR 333
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 73.5 bits (181), Expect = 5e-14
Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
TD++L + + +AG + S + VL ++R+P E+ID+ +
Sbjct: 222 TDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHP-------EQIDAFRGDEQSAQ---- 270
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R+ A + L I + ++ +L + RD D D
Sbjct: 271 ----RAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVD 326
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
R V FG G CLG +AR L + L F
Sbjct: 327 RLDVTR---EPIPHV-------AFGHGVHHCLGAALARLELRTVFTELWRRF 368
Score = 61.5 bits (150), Expect = 3e-10
Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 21/146 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
++ A + E +D++L + + +AG + S + VL ++R+P
Sbjct: 208 GMIGAVVAEYGDD------ATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHP----- 256
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
E+ID+ + + E++R+ A + L I +
Sbjct: 257 --EQIDAFRGDEQSAQ--------RAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGD 306
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++ +L + RD D D R
Sbjct: 307 SVICSLPAANRDPALAPDVDRLDVTR 332
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 73.4 bits (181), Expect = 7e-14
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T +QLL L AG ETT++ ++ S L L+ P E L K+P ++
Sbjct: 235 TTEQLLSTLGITINAGRETTTSMIALSTLLLLDRP-------ELPAELRKDPDLMP---- 283
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
A + E++R + A A + L +P D ++ L D E + DP+
Sbjct: 284 ----AAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
R + V FG G +C+G+ +AR L + L +LL
Sbjct: 340 RVDFHR---TDNHHV-------AFGYGVHQCVGQHLARLELEVALETLLRRV 381
Score = 59.9 bits (146), Expect = 1e-09
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL+S + + + +QLL L AG ETT++ ++ S L L+ P
Sbjct: 219 DLISKLV----TDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRP----- 269
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
E L K+P ++ A + E++R + A A + L +P D
Sbjct: 270 --ELPAELRKDPDLMP--------AAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADD 319
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++ L D E + DP+ R
Sbjct: 320 GVIALLAGANHDPEQFDDPERVDFHR 345
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 72.3 bits (178), Expect = 1e-13
Identities = 35/175 (20%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+D+ + + F AG +T + L+ +++ LI+ P + + L+++P ++
Sbjct: 219 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRP-------QLRNLLHEKPELIP---- 267
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
A + E++R + G+ A ++G ++ + ++LV L D EH+ +P
Sbjct: 268 ----AGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPG 323
Query: 502 VFRPERFI---HPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
+R H + FG G+ C G + R I + +LL
Sbjct: 324 SIELDRPNPTSH------------LAFGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Score = 61.9 bits (151), Expect = 3e-10
Identities = 28/146 (19%), Positives = 62/146 (42%), Gaps = 17/146 (11%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
L+ + S SD+ + + F AG +T + L+ +++ LI+ P
Sbjct: 201 GLMGELSRL--RKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP----- 253
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
+ + L+++P ++ A + E++R + G+ A ++G ++ +
Sbjct: 254 --QLRNLLHEKPELIP--------AGVEELLRINLSFADGLPRLATADIQVGDVLVRKGE 303
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++LV L D EH+ +P +R
Sbjct: 304 LVLVLLEGANFDPEHFPNPGSIELDR 329
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 71.4 bits (176), Expect = 1e-13
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T D+ + ++ L + G+ETT+N + + + P + +
Sbjct: 174 TMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNRSGF------------ 221
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR--AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 499
+ E +R+ +PI A + S + + I + ++V L S RD+ + +
Sbjct: 222 ------VEETLRY--YSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDE 273
Query: 500 PDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
PD+F+ R E + FG+G CLG P+AR I L+ +L HF
Sbjct: 274 PDLFKIGR-----------REMHLAFGIGIHMCLGAPLARLEASIALNDILNHF 316
Score = 57.2 bits (139), Expect = 8e-09
Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 22/128 (17%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
+ D+ + ++ L + G+ETT+N + + + P + +
Sbjct: 174 TMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNRSGF------------ 221
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR--AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 159
+ E +R+ +PI A + S + + I + ++V L S RD+ + +
Sbjct: 222 ------VEETLRY--YSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDE 273
Query: 160 PDVFRPER 167
PD+F+ R
Sbjct: 274 PDLFKIGR 281
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 71.9 bits (177), Expect = 2e-13
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
L+ L L AG ETT+N +S V+ L+ +P E++ + P
Sbjct: 231 DHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHP-------EQLTVVKANPGRTP---- 279
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R+ A + A + +G I ++V++ S D + DP
Sbjct: 280 ----MAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPA 335
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
V ER + FG G +CLG+ +AR L I +L
Sbjct: 336 VLDVER---GARHHL-------AFGFGPHQCLGQNLARMELQIVFDTLFRRI 377
Score = 60.3 bits (147), Expect = 8e-10
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 19/146 (13%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL S I AR + + L+ L L AG ETT+N +S V+ L+ +P
Sbjct: 215 DLFSRQI----ARQRQEGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHP----- 265
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
E++ + P + E++R+ A + A + +G I
Sbjct: 266 --EQLTVVKANPGRTP--------MAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGE 315
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++V++ S D + DP V ER
Sbjct: 316 GVIVSMLSANWDPAVFKDPAVLDVER 341
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 71.9 bits (177), Expect = 2e-13
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
++L+ + L +AG ETT++ S SV+ L+ +P E+ +L + +++
Sbjct: 230 DREELISTAMLLLIAGHETTASMTSLSVITLLDHP-------EQYAALRADRSLVPG--- 279
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R+ A I A + +I ++V RD + DPD
Sbjct: 280 -----AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD 334
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
R + FG G +CLG+ +AR L + L++L+
Sbjct: 335 ALDIHR---SARHHL-------AFGFGVHQCLGQNLARLELEVILNALMDRV 376
Score = 59.6 bits (145), Expect = 2e-09
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
LV A + + ++L+ + L +AG ETT++ S SV+ L+ +P
Sbjct: 214 GLVGALVAD----QLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHP----- 264
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
E+ +L + +++ + E++R+ A I A + +I
Sbjct: 265 --EQYAALRADRSLVPG--------AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGE 314
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++V RD + DPD R
Sbjct: 315 GVIVVNSIANRDGTVYEDPDALDIHR 340
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 71.5 bits (176), Expect = 2e-13
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 28/174 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
++ +LL L + L +AG E+T+ ++ V L+ P E L P ++
Sbjct: 240 SEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRP-------ELRRQLLDRPELIP---- 288
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR--AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGD 499
+ + E+ R +G A A++ L I +L + + RDQ + D
Sbjct: 289 ----SAVEELTRW-VPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPD 343
Query: 500 PDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D +R + + FG G CLG P+AR L + L LL
Sbjct: 344 ADRIDVDR---TPNQHL-------GFGHGVHHCLGAPLARVELQVALEVLLQRL 387
Score = 58.8 bits (143), Expect = 2e-09
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 22/148 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DLVSA + ++ S S+ +LL L + L +AG E+T+ ++ V L+ P
Sbjct: 224 DLVSALV----QARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRP----- 274
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR--AMKTSRLGSYVIPQ 139
E L P ++ + + E+ R +G A A++ L I
Sbjct: 275 --ELRRQLLDRPELIP--------SAVEELTRW-VPLGVGTAFPRYAVEDVTLRGVTIRA 323
Query: 140 DSIILVNLWSIMRDQEHWGDPDVFRPER 167
+L + + RDQ + D D +R
Sbjct: 324 GEPVLASTGAANRDQAQFPDADRIDVDR 351
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 71.5 bits (176), Expect = 3e-13
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 28/173 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T ++ +L+ L AG +TT N ++ +V L R+P +E L +P++
Sbjct: 237 TPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFP-------DEFARLRADPSLAR---- 285
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
E +R +P+ R + L I + +L+ L S RD W DP
Sbjct: 286 ----NAFEEAVRF--ESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDP 339
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D + R G FG G C+G+ +AR + L++L
Sbjct: 340 DRYDITRKTSGHVG----------FGSGVHMCVGQLVARLEGEVVLAALARKV 382
Score = 60.0 bits (146), Expect = 1e-09
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 18/127 (14%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
+ ++ +L+ L AG +TT N ++ +V L R+P +E L +P++
Sbjct: 237 TPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFP-------DEFARLRADPSLAR---- 285
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
E +R +P+ R + L I + +L+ L S RD W DP
Sbjct: 286 ----NAFEEAVRF--ESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDP 339
Query: 161 DVFRPER 167
D + R
Sbjct: 340 DRYDITR 346
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 71.1 bits (175), Expect = 3e-13
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
TD++L L L + G ET + + F VL L+ P +I+ L + P +R
Sbjct: 231 TDEELKGLCTALILGGVETVAGMIGFGVLALLDNP-------GQIELLFESPEKAER--- 280
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R+ + A+K + +I +L ++ RD+ DPD
Sbjct: 281 -----VVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPD 335
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
V R +V FG G C+G +AR+ L + +L F
Sbjct: 336 VLDANR---AAVSDV-------GFGHGIHYCVGAALARSMLRMAYQTLWRRF 377
Score = 60.3 bits (147), Expect = 8e-10
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 21/146 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
L+ + + + +D++L L L + G ET + + F VL L+ P
Sbjct: 217 GLLGMIVRD------HGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNP----- 265
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
+I+ L + P +R + E++R+ + A+K + +I
Sbjct: 266 --GQIELLFESPEKAER--------VVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGD 315
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
+L ++ RD+ DPDV R
Sbjct: 316 YVLCSILMANRDEALTPDPDVLDANR 341
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 71.1 bits (175), Expect = 3e-13
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 26/173 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T+D++ L + L AG ++ ++ + V+ L +P ++ + +P ++ R
Sbjct: 227 TEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHP-------DQRAAALADPDVMAR--- 276
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ E++R + R A + G I ++L +L D+ + P
Sbjct: 277 -----AVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGP 331
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
+ F R + + FG G C+G P+AR L + L
Sbjct: 332 EEFDAAR---TPNPHL-------TFGHGIWHCIGAPLARLELRTMFTKLFTRL 374
Score = 57.3 bits (139), Expect = 8e-09
Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
++D++ L + L AG ++ ++ + V+ L +P ++ + +P ++ R
Sbjct: 227 TEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHP-------DQRAAALADPDVMAR--- 276
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
+ E++R + R A + G I ++L +L D+ + P
Sbjct: 277 -----AVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGP 331
Query: 161 DVFRPER 167
+ F R
Sbjct: 332 EEFDAAR 338
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 70.7 bits (174), Expect = 4e-13
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
D+++++ L L +AG ETT N+++ L LI++P E+ID L ++P +
Sbjct: 229 DHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP-------EQIDVLLRDPGAVS---- 277
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R + + A + +G I +LV++ + RD + + +PD
Sbjct: 278 ----GVVEELLRF-TSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPD 332
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
+F R V FG G +CLG+ +AR L I L L
Sbjct: 333 IFDARR---NARHHV-------GFGHGIHQCLGQNLARAELEIALGGLFARI 374
Score = 59.2 bits (144), Expect = 2e-09
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
L+ I AR + D+++++ L L +AG ETT N+++ L LI++P
Sbjct: 213 GLLDELI----ARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP----- 263
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
E+ID L ++P + + E++R + + A + +G I
Sbjct: 264 --EQIDVLLRDPGAVS--------GVVEELLRF-TSVSDHIVRMAKEDIEVGGATIKAGD 312
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
+LV++ + RD + + +PD+F R
Sbjct: 313 AVLVSITLMNRDAKAYENPDIFDARR 338
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 70.7 bits (174), Expect = 4e-13
Identities = 35/173 (20%), Positives = 60/173 (34%), Gaps = 26/173 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T+ + + +L + G ++ + R P E + + +
Sbjct: 219 TESEAIATILVFYAVGHMAIGYLIASGIELFARRP-------EVFTAFRNDESARA---- 267
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
A I E++R P R + +G +I S I + + RD E + DP
Sbjct: 268 ----AIINEMVRM--DPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDP 321
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
DVF R P + L FGLG C G+ ++R + L +
Sbjct: 322 DVFDHTR--PPAASRNL------SFGLGPHSCAGQIISRAEATTVFAVLAERY 366
Score = 58.0 bits (141), Expect = 5e-09
Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 18/127 (14%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
++ + + +L + G ++ + R P E + + +
Sbjct: 219 TESEAIATILVFYAVGHMAIGYLIASGIELFARRP-------EVFTAFRNDESARA---- 267
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
A I E++R P R + +G +I S I + + RD E + DP
Sbjct: 268 ----AIINEMVRM--DPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDP 321
Query: 161 DVFRPER 167
DVF R
Sbjct: 322 DVFDHTR 328
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 72.0 bits (176), Expect = 4e-13
Identities = 108/586 (18%), Positives = 177/586 (30%), Gaps = 219/586 (37%)
Query: 129 TSRLGSYVIPQDSI---ILV--NLW---SIMRDQEHWGDPDVFR---PERFIHPTSGEVL 177
++R + S+ +LV + S +++Q F PE PT G
Sbjct: 5 STR--PLTLSHGSLEHVLLVPTASFFIASQLQEQ--------FNKILPE----PTEGFAA 50
Query: 178 YDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEM----------CAATVL--FEAQ 225
DE P EL V K LG+ + L FE
Sbjct: 51 DDEPTTP-------AEL---------VGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENC 94
Query: 226 FLDFMRSYGQDSVEDASIHKYGLFSLVSVLGEDWWLVLRCGHTYLDERKVCQVPTQPNLK 285
+L+ G D IH +L + L L E V T+ +K
Sbjct: 95 YLE-----GND------IH-----ALAAKL--------------LQENDTTLVKTKELIK 124
Query: 286 KYLYANLVSLGGGLPCDP-------EDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTY 338
Y+ A +++ P D V ++ +I +GG +G Y
Sbjct: 125 NYITARIMA---KRPFDKKSNSALFRAVGEGNAQLVAI---FGG---------QGNTDDY 169
Query: 339 IIAYIRDFACDY-YFIGDSFETSVPWDKTVLLCINVKKRLTRECTD-DQLLVLLLDL--F 394
+RD Y +GD + S L L R D +++ L++ +
Sbjct: 170 F-EELRDLYQTYHVLVGDLIKFSAE-----TL-----SELIRTTLDAEKVFTQGLNILEW 218
Query: 395 MAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI----LDRYK--CPYLEATI 448
+ T YL+ P + S P I L Y L T
Sbjct: 219 LENPSNTP-----DKDYLLSIP-I---------SC---PLIGVIQLAHYVVTAKLLGFTP 260
Query: 449 MEIMRH-----GNTAPIGVAHRAMKTSRLG-SYVIPQDSIILVNLWSIMRDQEHWGDPDV 502
E+ + G++ + A A+ + S+ + I V + +R E +
Sbjct: 261 GELRSYLKGATGHSQGLVTA-VAIAETDSWESFFVSVRKAITVLFFIGVRCYEAY----- 314
Query: 503 FRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFI------FLSSLLYHFNIS 556
P + P+ +L D + G PM L I + + N
Sbjct: 315 --PNTSLPPS---ILEDS--LENNEGVPS----PM----LSISNLTQEQVQDYVNKTNSH 359
Query: 557 IPSDEPL---------------PAVTVLDGVTLAPAPYKAPGELYPKQMR--FSEKLSVF 599
+P+ + + P + L G+ L KAP L Q R FSE+ F
Sbjct: 360 LPAGKQVEISLVNGAKNLVVSGPPQS-LYGLNLTLRKAKAPSGL--DQSRIPFSERKLKF 416
Query: 600 LLSYSPLDFWITGP----LL--------------NLFKKSHRLNVP 627
+ P + P LL N+ + + +P
Sbjct: 417 SNRFLP----VASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIP 458
Score = 62.4 bits (151), Expect = 4e-10
Identities = 114/641 (17%), Positives = 191/641 (29%), Gaps = 248/641 (38%)
Query: 171 PTS----GEVLYDETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQF 226
PT+ L ++ F L T+G DDE L +F
Sbjct: 23 PTASFFIASQLQEQ----FNKI---LPEPTEGFAA----------DDEPTTPAELV-GKF 64
Query: 227 LDFMRSYGQDSVEDASIHKYGLFSLVSVLGEDWWLVLRCG---HT----YLDERKVCQVP 279
L ++ S VE + + ++ L L E L G H L E V
Sbjct: 65 LGYVSSL----VEPSKVGQFDQV-LNLCLTEFENCYLE-GNDIHALAAKLLQENDTTLVK 118
Query: 280 TQPNLKKYLYANLVSLGGGLPCDP-------EDVKNNEDKIYSIAKRYGGIPAGESNGRR 332
T+ +K Y+ A +++ P D V ++ +I +GG +
Sbjct: 119 TKELIKNYITARIMA---KRPFDKKSNSALFRAVGEGNAQLVAI---FGG---------Q 163
Query: 333 GYMLTYIIAYIRDFACDY-YFIGDSFETSVPWDKTVLLCINVKKRLTRECTD-DQLLVLL 390
G Y +RD Y +GD + S L L R D +++
Sbjct: 164 GNTDDY-FEELRDLYQTYHVLVGDLIKFSAE-----TL-----SELIRTTLDAEKVFTQG 212
Query: 391 LDL--FMAGSETT-------SNSLSFSVLYLIRYPH--VQRKI----------------- 422
L++ ++ T S +S ++ +I+ H V K+
Sbjct: 213 LNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATG 272
Query: 423 -----------------QEEIDSLNKEPTIL--------DRYKCPYLEATIMEI-MRHGN 456
+ S+ K T+L + Y L +I+E + +
Sbjct: 273 HSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNE 332
Query: 457 TAP---IGVAHRAMKTSRLGSYV------IPQD---SIILVNLWSIMRDQEHWGDPDVFR 504
P + + + ++ YV +P I LVN G
Sbjct: 333 GVPSPMLSI--SNLTQEQVQDYVNKTNSHLPAGKQVEISLVN-----------G------ 373
Query: 505 PERFI---HPTSGEVLY---------------DETLIPFGLGKRRCLGEPMARTSLFIFL 546
+ + P S LY D++ IPF +R+ FL
Sbjct: 374 AKNLVVSGPPQS---LYGLNLTLRKAKAPSGLDQSRIPF--SERK----LKFSNR---FL 421
Query: 547 -------SSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPGELYP----KQMR-FSE 594
S LL +P+ + + V + V+ + P +Y +R S
Sbjct: 422 PVASPFHSHLL------VPASDLINKDLVKNNVSFNAKDIQIP--VYDTFDGSDLRVLSG 473
Query: 595 KLS---VFLLSYSPLDFWITGPLLNLFKKSHRLNVPGPSWLPVVGCYLEFSRLLSKFKYH 651
+S V + P+ W FK +H L+ GP +G
Sbjct: 474 SISERIVDCIIRLPVK-W---ETTTQFKATHILDF-GPGGASGLGV-------------- 514
Query: 652 YLVCENYARRYGPITGLRLGRDRIILVS----------GFK 682
L N + G TG+ R+I+ GFK
Sbjct: 515 -LTHRN---KDG--TGV-----RVIVAGTLDINPDDDYGFK 544
Score = 62.0 bits (150), Expect = 6e-10
Identities = 103/615 (16%), Positives = 174/615 (28%), Gaps = 253/615 (41%)
Query: 19 KFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYL----IR 74
KF VS+ +E +K F DQ+L L L F E YL I
Sbjct: 63 KFLGYVSSLVEP-----SKVGQF--DQVLNLCLTEF----ENC---------YLEGNDI- 101
Query: 75 YPH--VQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAH-----RAM 127
H + +QE +L K ++ K Y+ A R P RA+
Sbjct: 102 --HALAAKLLQENDTTLVKTKELI---KN-YITA------RIMAKRPFDKKSNSALFRAV 149
Query: 128 KTSRLGSYVI--PQDSII-----LVNLWSIMRDQEHWGDPDVFRP--ERFIHPTSGEVLY 178
I Q + L +L+ + I S E L
Sbjct: 150 GEGNAQLVAIFGGQGNTDDYFEELRDLY------------QTYHVLVGDLIK-FSAETLS 196
Query: 179 D--------ETLIPFGLDPGYLELLTDGLKKLYVTKILGFRDDE-MCAATV------LFE 223
+ E + GL+ LE L + D + + + + + +
Sbjct: 197 ELIRTTLDAEKVFTQGLNI--LEWLENPSNT---------PDKDYLLSIPISCPLIGVIQ 245
Query: 224 -AQFLDFMRSYG------QDSVEDASIHKYGLFSLVSV-LGEDW---------------W 260
A ++ + G + ++ A+ H GL + V++ + W +
Sbjct: 246 LAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFF 305
Query: 261 LVLRCGHTYLDERKVCQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRY 320
+ +RC Y PN L +++ + ++NNE
Sbjct: 306 IGVRCYEAY------------PNT--SLPPSILE---------DSLENNE---------- 332
Query: 321 GGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTV---LLCINVKKRL 377
G+P+ ML+ I ++ DY + + + +P K V L +N
Sbjct: 333 -GVPS--------PMLS-ISNLTQEQVQDY--V-NKTNSHLPAGKQVEISL--VN----- 372
Query: 378 TRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYL-----------IRYPHVQRKIQEEI 426
L+V +G SL L L R P +RK
Sbjct: 373 ----GAKNLVV-------SGP---PQSLYGLNLTLRKAKAPSGLDQSRIPFSERK----- 413
Query: 427 DSLNKEPTILDR-------YKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIP- 478
+R + L I + + + ++ IP
Sbjct: 414 ------LKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQ--------IPV 459
Query: 479 ------------QDSII--LVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLYDETLIP 524
SI +V+ I+R W F+ H ++
Sbjct: 460 YDTFDGSDLRVLSGSISERIVDC--IIRLPVKWETTTQFKAT---H-----------ILD 503
Query: 525 FGLGKRRCLGEPMAR 539
FG G LG R
Sbjct: 504 FGPGGASGLGVLTHR 518
Score = 34.3 bits (78), Expect = 0.20
Identities = 46/220 (20%), Positives = 67/220 (30%), Gaps = 97/220 (44%)
Query: 161 DVF-RPERFIHPTSGEVLYD-------ETLIPFGLDPG------YLELL----TDG---L 199
DV+ R + T G + D I FG + G Y ++ DG
Sbjct: 1644 DVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKT 1703
Query: 200 KKLY-----VTKILGFR-DDEMCAAT-------VLFE-AQFLDFMRSYGQDSVEDASI-- 243
+K++ + FR + + +AT L E A F D ++S G DA+
Sbjct: 1704 EKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFED-LKSKG-LIPADATFAG 1761
Query: 244 HKYGLFSLVSVLGEDWWLVLRCGHTYLDERKVCQVPTQPNLKKYLYANLVSLGGGLPCDP 303
H S LGE YA L SL +
Sbjct: 1762 H--------S-LGE-------------------------------YAALASLADVMSI-- 1779
Query: 304 EDVKNNEDKIYSIAKRYGG------IPAGESNGRRGY-ML 336
E + + R G +P E GR Y M+
Sbjct: 1780 ------ESLVEVVFYR--GMTMQVAVPRDE-LGRSNYGMI 1810
Score = 32.3 bits (73), Expect = 0.73
Identities = 33/168 (19%), Positives = 54/168 (32%), Gaps = 48/168 (28%)
Query: 540 TSLFIFLSSLLYHFNISIPSDEPLPAVTVLDGVTLAPAPYKAPGELYPKQMRFSEKLSVF 599
T+ F S L FN LP T +G P P EL +F
Sbjct: 24 TASFFIASQLQEQFNKI------LPEPT--EGFAADDEP-TTPAELV---GKF------- 64
Query: 600 LLSYSPLDFWITGPLLNLFKKSHRLNVPGPSWLPVVGCYLEFSRL-LSKFKYHYLVCEN- 657
L Y S + P VG + + L L++F+ YL +
Sbjct: 65 -LGYV----------------SSLVE-PSK-----VGQFDQVLNLCLTEFENCYLEGNDI 101
Query: 658 --YARRYGPITGLRLGRDRIILVSGFKAVREVLTRDEFDGRPSGYFFR 703
A + L + + ++ + A ++ + FD + + FR
Sbjct: 102 HALAAKLLQENDTTLVKTKELIKNYITAR--IMAKRPFDKKSNSALFR 147
Score = 29.2 bits (65), Expect = 6.9
Identities = 34/243 (13%), Positives = 71/243 (29%), Gaps = 96/243 (39%)
Query: 52 DLFMAGSETTSNSLSFSVLYLIR-YP-----HVQ----RKIQEEIDSLNKEPTILDRYKC 101
D++ ++ FS+L ++ P H ++I+E ++ E + + K
Sbjct: 1644 DVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKT 1703
Query: 102 PYLEATIME----IMRHG---------NTAP----IGVA-HRAMKT-------------S 130
+ I E T P + A +K+ S
Sbjct: 1704 EKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHS 1763
Query: 131 RLGSY--------VIP-QDSIILVNL------WSIMRDQEHWGDPDVF--RPERF----- 168
LG Y V+ + + +V ++ RD+ + + P R
Sbjct: 1764 -LGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFS 1822
Query: 169 ----------IHPTSGEVL----YDETLIPFGLDPG--Y--------LELLTDGLKKLYV 204
+ +G ++ Y+ Y L+ +T+ L + +
Sbjct: 1823 QEALQYVVERVGKRTGWLVEIVNYNV--------ENQQYVAAGDLRALDTVTNVLNFIKL 1874
Query: 205 TKI 207
KI
Sbjct: 1875 QKI 1877
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 70.4 bits (173), Expect = 5e-13
Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 28/173 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T D +L+ ++ + G+ETT ++++ +V L P + +L +D
Sbjct: 240 TIDDVLLNCDNVLIGGNETTRHAITGAVHALATVP-------GLLTALRDGSADVD---- 288
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ E++R T+P R + +P + ++ L + RD + DP
Sbjct: 289 ----TVVEEVLRW--TSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDP 342
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D F P R + I FG G CLG +AR L + L L
Sbjct: 343 DTFLPGRKPNRH----------ITFGHGMHHCLGSALARIELSVVLRVLAERV 385
Score = 56.6 bits (137), Expect = 2e-08
Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 22 DLVSAYI--EEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQ 79
DLVS + +++ + D +L+ ++ + G+ETT ++++ +V L P
Sbjct: 228 DLVSTLVTDDDL----------TIDDVLLNCDNVLIGGNETTRHAITGAVHALATVP--- 274
Query: 80 RKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIP 138
+ +L +D + E++R T+P R + +P
Sbjct: 275 ----GLLTALRDGSADVD--------TVVEEVLRW--TSPAMHVLRVTTADVTINGRDLP 320
Query: 139 QDSIILVNLWSIMRDQEHWGDPDVFRPER 167
+ ++ L + RD + DPD F P R
Sbjct: 321 SGTPVVAWLPAANRDPAEFDDPDTFLPGR 349
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 70.0 bits (172), Expect = 7e-13
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T+D+++ L +AG ETT N ++ + L ++R P + +L + +
Sbjct: 242 TEDEIIATCNLLLIAGHETTVNLIANAALAMLRTP-------GQWAALAADGSRAS---- 290
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
A I E MR+ P+ + R A +G++ +P+ +L+ L + RD G P
Sbjct: 291 ----AVIEETMRY--DPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAP 344
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D F P+R + FG G CLG P+AR + L +L F
Sbjct: 345 DRFDPDRAQIR----------HLGFGKGAHFCLGAPLARLEATVALPALAARF 387
Score = 59.6 bits (145), Expect = 1e-09
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL+S + + ++D+++ L +AG ETT N ++ + L ++R P
Sbjct: 226 DLMSGLVA---VEES-GDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTP----- 276
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQD 140
+ +L + + A I E MR+ P+ + R A +G++ +P+
Sbjct: 277 --GQWAALAADGSRAS--------AVIEETMRY--DPPVQLVSRYAGDDLTIGTHTVPKG 324
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
+L+ L + RD G PD F P+R
Sbjct: 325 DTMLLLLAAAHRDPTIVGAPDRFDPDR 351
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 70.0 bits (172), Expect = 8e-13
Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 24/172 (13%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
D +L L+ + +AG ETT++ L+ ++ ++P ++ + + P + +
Sbjct: 239 DDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP-------DQWMKIKENPELAPQ--- 288
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R T P+ A + + IP + + + RD + D D
Sbjct: 289 -----AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 343
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F + + FG G CLG +AR L +++L
Sbjct: 344 RFDITV--KREAPSI-------AFGGGPHFCLGTALARLELTEAVAALATRL 386
Score = 59.6 bits (145), Expect = 2e-09
Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
D +L L+ + +AG ETT++ L+ ++ ++P ++ + + P + +
Sbjct: 239 DDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP-------DQWMKIKENPELAPQ--- 288
Query: 102 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161
+ E++R T P+ A + + IP + + + RD + D D
Sbjct: 289 -----AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 343
Query: 162 VFRPER 167
F
Sbjct: 344 RFDITV 349
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 70.0 bits (172), Expect = 9e-13
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T ++LL + L +AG ETT N ++ + L+ +P +++ +L + T+LD
Sbjct: 249 TSEELLGMAHILLVAGHETTVNLIANGMYALLSHP-------DQLAALRADMTLLD---- 297
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R+ ++ L VIP +LV L R E + DP
Sbjct: 298 ----GAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPH 353
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F R T+G + FG G C+G P+AR I + +LL
Sbjct: 354 RFDIRR---DTAGHL-------AFGHGIHFCIGAPLARLEARIAVRALLERC 395
Score = 61.1 bits (149), Expect = 6e-10
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 18/146 (12%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL+SA + S + ++LL + L +AG ETT N ++ + L+ +P
Sbjct: 232 DLLSALVR---TSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHP----- 283
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
+++ +L + T+LD + E++R+ ++ L VIP
Sbjct: 284 --DQLAALRADMTLLD--------GAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGD 333
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
+LV L R E + DP F R
Sbjct: 334 TVLVVLADAHRTPERFPDPHRFDIRR 359
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 69.6 bits (171), Expect = 1e-12
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 29/183 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T+++ + L +AG ETT N +S SVL L+++P E++ L + P ++
Sbjct: 220 TEEEAASTCILLAIAGHETTVNLISNSVLCLLQHP-------EQLLKLRENPDLIG---- 268
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ E +R+ +P + R A + + I Q + + L + RD + +P
Sbjct: 269 ----TAVEECLRY--ESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNP 322
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559
DVF R +P + FG G CLG +AR I +++LL ++++
Sbjct: 323 DVFDITRSPNPH----------LSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLAD 372
Query: 560 DEP 562
E
Sbjct: 373 FEW 375
Score = 58.0 bits (141), Expect = 4e-09
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
++++ + L +AG ETT N +S SVL L+++P E++ L + P ++
Sbjct: 220 TEEEAASTCILLAIAGHETTVNLISNSVLCLLQHP-------EQLLKLRENPDLIG---- 268
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
+ E +R+ +P + R A + + I Q + + L + RD + +P
Sbjct: 269 ----TAVEECLRY--ESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNP 322
Query: 161 DVFRPER 167
DVF R
Sbjct: 323 DVFDITR 329
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 69.2 bits (170), Expect = 1e-12
Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+DD+L++ L + + G ETT ++LS L+R ++ D L ++P++L
Sbjct: 216 SDDELVMETLLILIGGDETTRHTLSGGTEQLLRNR-------DQWDLLQRDPSLLP---- 264
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
I E++R TAP+ R + + +++ S D+ + +P
Sbjct: 265 ----GAIEEMLRW--TAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEP 318
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
+ F +R + FG G CLG +AR L + +L
Sbjct: 319 EKFDVQRNPNSHLA----------FGFGTHFCLGNQLARLELSLMTERVLRRL 361
Score = 56.9 bits (138), Expect = 1e-08
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 18/127 (14%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
SDD+L++ L + + G ETT ++LS L+R ++ D L ++P++L
Sbjct: 216 SDDELVMETLLILIGGDETTRHTLSGGTEQLLRNR-------DQWDLLQRDPSLLP---- 264
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
I E++R TAP+ R + + +++ S D+ + +P
Sbjct: 265 ----GAIEEMLRW--TAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEP 318
Query: 161 DVFRPER 167
+ F +R
Sbjct: 319 EKFDVQR 325
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 69.2 bits (170), Expect = 1e-12
Identities = 46/206 (22%), Positives = 74/206 (35%), Gaps = 34/206 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
D++ L +AG TT+ L V L +P E +P +
Sbjct: 227 DDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAE-------DPGRIP---- 275
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
A + E++R+ P R K + + IP D ++ + S RD + DP
Sbjct: 276 ----AIVEEVLRY--RPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDP 329
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559
D F P R L FG G CLG P+AR + L ++ F +++
Sbjct: 330 DRFDPSR--KSGGAAQL------SFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDR 381
Query: 560 DEPLPAV--TVLDG-----VTLAPAP 578
D+ ++ G V +P
Sbjct: 382 DDERLRHFEQIVLGTRHLPVLAGSSP 407
Score = 58.0 bits (141), Expect = 5e-09
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 18/127 (14%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
D++ L +AG TT+ L V L +P E +P +
Sbjct: 227 DDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAE-------DPGRIP---- 275
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
A + E++R+ P R K + + IP D ++ + S RD + DP
Sbjct: 276 ----AIVEEVLRY--RPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDP 329
Query: 161 DVFRPER 167
D F P R
Sbjct: 330 DRFDPSR 336
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 68.1 bits (167), Expect = 3e-12
Identities = 39/175 (22%), Positives = 62/175 (35%), Gaps = 30/175 (17%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ ++L LL + AG ETT N + +V L+ P +++ + K
Sbjct: 228 SPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRP-------DQLALVRKGEVTWA---- 276
Query: 442 PYLEATIMEIMRH---GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG 498
+ E +RH P+ A + I + IL + + R +
Sbjct: 277 ----DVVEETLRHEPAVKHLPLRYAVTDIALP--DGRTIARGEPILASYAAANRHPDWHE 330
Query: 499 DPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D D F R + FG G CLG P+AR + + L SL F
Sbjct: 331 DADTFDATR---TVKEHL-------AFGHGVHFCLGAPLARMEVTLALESLFGRF 375
Score = 58.0 bits (141), Expect = 4e-09
Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 21/149 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
D+ S I + S ++L LL + AG ETT N + +V L+ P
Sbjct: 209 DMTSLLIAA-RDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRP----- 262
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRH---GNTAPIGVAHRAMKTSRLGSYVIP 138
+++ + K + E +RH P+ A + I
Sbjct: 263 --DQLALVRKGEVTWA--------DVVEETLRHEPAVKHLPLRYAVTDIALP--DGRTIA 310
Query: 139 QDSIILVNLWSIMRDQEHWGDPDVFRPER 167
+ IL + + R + D D F R
Sbjct: 311 RGEPILASYAAANRHPDWHEDADTFDATR 339
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 68.0 bits (167), Expect = 3e-12
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ ++++ ++ G ET ++ + +VL L+ +P +++D L + P +L
Sbjct: 219 SRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHP-------DQLDLLRRRPDLLA---- 267
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ E +R+ + R L + +D +++V + RD + P
Sbjct: 268 ----QAVEECLRY--DPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRP 321
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLL 550
D F ER P+ FG G R CLG +ART L +++L
Sbjct: 322 DDFDIERDPVPSMS----------FGAGMRYCLGSYLARTQLRAAVAALA 361
Score = 58.8 bits (143), Expect = 3e-09
Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
S ++++ ++ G ET ++ + +VL L+ +P +++D L + P +L
Sbjct: 219 SRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHP-------DQLDLLRRRPDLLA---- 267
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
+ E +R+ + R L + +D +++V + RD + P
Sbjct: 268 ----QAVEECLRY--DPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRP 321
Query: 161 DVFRPER 167
D F ER
Sbjct: 322 DDFDIER 328
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 68.0 bits (167), Expect = 3e-12
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ ++L+ + + L +AG ETT N + VL L+ +P ++ L ++P+++
Sbjct: 222 SQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHP-------DQRKLLAEDPSLIS---- 270
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ + E +R + + IP ++++ L + RD + +PD
Sbjct: 271 ----SAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPD 326
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
R SG V FG G CLG +AR + + L
Sbjct: 327 RLDITR---DASGGV-------FFGHGIHFCLGAQLARLEGRVAIGRLFADR 368
Score = 59.9 bits (146), Expect = 1e-09
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
L+S+ + S ++L+ + + L +AG ETT N + VL L+ +P
Sbjct: 205 ALLSSLLA---VSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHP----- 256
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
++ L ++P+++ + + E +R + + IP
Sbjct: 257 --DQRKLLAEDPSLIS--------SAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGE 306
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++++ L + RD + +PD R
Sbjct: 307 MVMLGLAAANRDADWMPEPDRLDITR 332
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 68.1 bits (167), Expect = 3e-12
Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 28/174 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ ++ + L +AG+ETT N+++ VL L RYP + + + D L
Sbjct: 260 SSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGL------------ 307
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ EI+R +P+ R + L + + + S RD+ + DP
Sbjct: 308 --APTAVEEIVRW--ASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADP 363
Query: 501 DVFRPERFIHPTSGEVLYDETLIPF-GLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F R +P + F G G CLG +AR + + L
Sbjct: 364 WTFDLARNPNPH----------LGFGGGGAHFCLGANLARREIRVAFDELRRQM 407
Score = 59.3 bits (144), Expect = 2e-09
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 25/163 (15%)
Query: 7 TEIVSDHKKN-TDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSL 65
T + D + N D DL S+ +E A + S ++ + L +AG+ETT N++
Sbjct: 231 TALAEDRRVNHHD---DLTSSLVE---AEVD-GERLSSREIASFFILLVVAGNETTRNAI 283
Query: 66 SFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR 125
+ VL L RYP + + + D L + EI+R +P+ R
Sbjct: 284 THGVLALSRYPEQRDRWWSDFDGL--------------APTAVEEIVRW--ASPVVYMRR 327
Query: 126 -AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPER 167
+ L + + + S RD+ + DP F R
Sbjct: 328 TLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR 370
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 68.1 bits (167), Expect = 3e-12
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ +L+ L+ + AG++TT ++F+VL L+R P E ++ + EP ++
Sbjct: 240 STKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP-------EALELVKAEPGLMR---- 288
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++R N IG A + I + ++ + + S +RD + PD
Sbjct: 289 ----NALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPD 344
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
VF R + +G G C G +AR I + ++ F
Sbjct: 345 VFDVRRDTSASLA----------YGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
Score = 58.4 bits (142), Expect = 4e-09
Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
D+++ + S S +L+ L+ + AG++TT ++F+VL L+R P
Sbjct: 224 DVLTMLL----QAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSP----- 274
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
E ++ + EP ++ + E++R N IG A + I +
Sbjct: 275 --EALELVKAEPGLMR--------NALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGE 324
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++ + + S +RD + PDVF R
Sbjct: 325 MVFLLIPSALRDGTVFSRPDVFDVRR 350
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 68.1 bits (167), Expect = 3e-12
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 29/183 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ D ++ + L AG ETT+N L+ +VL L + + +D L P
Sbjct: 240 SVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHR-------DVLDELRTTPESTP---- 288
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
A + E+MR+ P+ R A + RLG + IP+ S ++ L S RD + DP
Sbjct: 289 ----AAVEELMRY--DPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDP 342
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559
DV R + FGLG CLG +AR I L +LL + +
Sbjct: 343 DVLDVHRAAERQ----------VGFGLGIHYCLGATLARAEAEIGLRALLDGIPALGRGA 392
Query: 560 DEP 562
E
Sbjct: 393 HEV 395
Score = 56.9 bits (138), Expect = 1e-08
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL++ + + S S D ++ + L AG ETT+N L+ +VL L +
Sbjct: 224 DLLTLLV----RARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHR----- 274
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQD 140
+ +D L P A + E+MR+ P+ R A + RLG + IP+
Sbjct: 275 --DVLDELRTTPESTP--------AAVEELMRY--DPPVQAVTRWAYEDIRLGDHDIPRG 322
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
S ++ L S RD + DPDV R
Sbjct: 323 SRVVALLGSANRDPARFPDPDVLDVHR 349
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 68.0 bits (167), Expect = 3e-12
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ D+L + L L +AG E + + + L+ +P +++ + ++P+ L
Sbjct: 227 SADELTSIALVLLLAGFEASVSLIGIGTYLLLTHP-------DQLALVRRDPSALP---- 275
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ EI+R+ AP R A + +G IPQ S +LV + RD + + DP
Sbjct: 276 ----NAVEEILRY--IAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDP 329
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F R T G + FG G C+G P+A+ + L +L F
Sbjct: 330 HRFDVTR---DTRGHL-------SFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
Score = 61.1 bits (149), Expect = 4e-10
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL+SA I + + S D+L + L L +AG E + + + L+ +P
Sbjct: 210 DLLSALIR---VQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHP----- 261
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQD 140
+++ + ++P+ L + EI+R+ AP R A + +G IPQ
Sbjct: 262 --DQLALVRRDPSALP--------NAVEEILRY--IAPPETTTRFAAEEVEIGGVAIPQY 309
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
S +LV + RD + + DP F R
Sbjct: 310 STVLVANGAANRDPKQFPDPHRFDVTR 336
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 67.4 bits (165), Expect = 4e-12
Identities = 33/179 (18%), Positives = 59/179 (32%), Gaps = 32/179 (17%)
Query: 376 RLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTI 435
D L L AG+E T+N++ +VL + P + + +P
Sbjct: 206 AAVAALPADPALRAL----FAGAEMTANTVVDAVLAVSAEP-------GLAERIADDPAA 254
Query: 436 LDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQ 494
T+ E++R + + R A RLG +VI + ++V + + RD
Sbjct: 255 AQ--------RTVAEVLRL--HPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDP 304
Query: 495 EHWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
E + +PD +R P + L E + L +
Sbjct: 305 EVFAEPDRLDVDR---PDADRAL-------SAHRGHPGRLEELVTALATAALRAAAKAL 353
Score = 50.8 bits (122), Expect = 8e-07
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 23/126 (18%)
Query: 43 DDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCP 102
D + L AG+E T+N++ +VL + P + + +P
Sbjct: 214 DP--ALRAL---FAGAEMTANTVVDAVLAVSAEP-------GLAERIADDPAAAQ----- 256
Query: 103 YLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 161
T+ E++R + + R A RLG +VI + ++V + + RD E + +PD
Sbjct: 257 ---RTVAEVLRL--HPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPD 311
Query: 162 VFRPER 167
+R
Sbjct: 312 RLDVDR 317
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 66.8 bits (164), Expect = 6e-12
Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 32/189 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
++ + + L +AG+ETT+N + ++ Y + ++ +
Sbjct: 196 SELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDY--------VREKGAL------ 241
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ E +R + P+ R + ++ VI + ++ V + S RD+E + DP
Sbjct: 242 ----KAVEEALRF--SPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDP 295
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPS 559
D F P+R +P + FG G CLG P+AR I L F I
Sbjct: 296 DSFIPDRTPNPH----------LSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVK 345
Query: 560 DEPLPAVTV 568
E + +
Sbjct: 346 KEKIDNEVL 354
Score = 51.8 bits (125), Expect = 4e-07
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 30/147 (20%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL + S+ + + L +AG+ETT+N + ++ Y
Sbjct: 185 DLTGKIANS---------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDY- 234
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQD 140
+ ++ + + E +R + P+ R + ++ VI +
Sbjct: 235 -------VREKGAL----------KAVEEALRF--SPPVMRTIRVTKEKVKIRDQVIDEG 275
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
++ V + S RD+E + DPD F P+R
Sbjct: 276 ELVRVWIASANRDEEVFKDPDSFIPDR 302
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 67.3 bits (165), Expect = 6e-12
Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 30/184 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+L + G++T + L S+ L R P ++ L +P +
Sbjct: 236 GTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRP-------DQRRLLLDDPEGIP---- 284
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG-D 499
+ E++R T+P+ R + +G IP +L+ S RD+ +G D
Sbjct: 285 ----DAVEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPD 338
Query: 500 PDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIP 558
R ++ F G CLG AR + L+ LL + +
Sbjct: 339 AAELDVTRCPRN----------ILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVA 388
Query: 559 SDEP 562
Sbjct: 389 ESRI 392
Score = 54.2 bits (131), Expect = 9e-08
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 19/128 (14%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
+L + G++T + L S+ L R P ++ L +P +
Sbjct: 236 GTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRP-------DQRRLLLDDPEGIP---- 284
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWG-D 159
+ E++R T+P+ R + +G IP +L+ S RD+ +G D
Sbjct: 285 ----DAVEELLRL--TSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPD 338
Query: 160 PDVFRPER 167
R
Sbjct: 339 AAELDVTR 346
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 66.8 bits (164), Expect = 7e-12
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 31/194 (15%)
Query: 377 LTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTIL 436
+ +D + L ++ L +AG+ETT+N +S SV+ R+ ++I+E ++L
Sbjct: 190 VNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNL-WQRIRE--ENL------- 239
Query: 437 DRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQE 495
I E +R+ + P+ R + +LG I + + V + S RD+E
Sbjct: 240 -------YLKAIEEALRY--SPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 496 HWGDPDVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF-N 554
+ D + F P+R +P + FG G CLG P+AR I + F +
Sbjct: 291 VFHDGEKFIPDRNPNPH----------LSFGSGIHLCLGAPLARLEARIAIEEFSKRFRH 340
Query: 555 ISIPSDEPLPAVTV 568
I I E +P +
Sbjct: 341 IEILDTEKVPNEVL 354
Score = 53.7 bits (130), Expect = 1e-07
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 29/147 (19%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
++VS + + SD + L ++ L +AG+ETT+N +S SV+ R+ ++
Sbjct: 184 EVVSRVVN---SN------LSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNL-WQR 233
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQD 140
I+E ++L I E +R+ + P+ R + +LG I +
Sbjct: 234 IRE--ENL--------------YLKAIEEALRY--SPPVMRTVRKTKERVKLGDQTIEEG 275
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
+ V + S RD+E + D + F P+R
Sbjct: 276 EYVRVWIASANRDEEVFHDGEKFIPDR 302
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 66.5 bits (163), Expect = 9e-12
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 25/173 (14%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
TD +++ L + AG ETT + + +V+ L +P E+ +
Sbjct: 228 TDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP-------EQRALVLSGEAEWS---- 276
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQE-HWGDP 500
A + E +R + A + +G VIP ++V+ ++ RD+ H
Sbjct: 277 ----AVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTA 332
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D F R + + FG G C G ++R + L +L F
Sbjct: 333 DRFDLTR---TSGNRHI------SFGHGPHVCPGAALSRMEAGVALPALYARF 376
Score = 56.1 bits (136), Expect = 2e-08
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 20/147 (13%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
DL SA I S +D +++ L + AG ETT + + +V+ L +P
Sbjct: 212 DLTSALI----QASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP----- 262
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
E+ + A + E +R + A + +G VIP
Sbjct: 263 --EQRALVLSGEAEWS--------AVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGD 312
Query: 142 IILVNLWSIMRDQE-HWGDPDVFRPER 167
++V+ ++ RD+ H D F R
Sbjct: 313 ALIVSYGALGRDERAHGPTADRFDLTR 339
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 66.5 bits (163), Expect = 1e-11
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 27/173 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+ + + L L + G T N + + L+ E + + + P
Sbjct: 231 GETEAVGLAGPLQIGGEAVTHN-VGQMLYLLLTRR-------ELMARMRERPGARGT--- 279
Query: 442 PYLEATIMEIMRH-GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ E++R + +G+A A++ + I + V+ + RD + + DP
Sbjct: 280 -----ALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDP 334
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D +R +P +G G C G +AR + + +LL
Sbjct: 335 DRIDLDRDPNPHLA----------YGNGHHFCTGAVLARMQTELLVDTLLERL 377
Score = 53.4 bits (129), Expect = 1e-07
Identities = 23/147 (15%), Positives = 49/147 (33%), Gaps = 22/147 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
D+ S + + + L L + G T N + + L+
Sbjct: 216 DVYSMLGAA-----VGRGEVGETEAVGLAGPLQIGGEAVTHN-VGQMLYLLLTRR----- 264
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRH-GNTAPIGVAHRAMKTSRLGSYVIPQD 140
E + + + P + E++R + +G+A A++ + I
Sbjct: 265 --ELMARMRERPGARGT--------ALDELLRWISHRTSVGLARIALEDVEVHGTRIAAG 314
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
+ V+ + RD + + DPD +R
Sbjct: 315 EPVYVSYLAANRDPDVFPDPDRIDLDR 341
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 65.8 bits (161), Expect = 2e-11
Identities = 37/173 (21%), Positives = 62/173 (35%), Gaps = 28/173 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+D + AG +TTS S + + L L R P + + + +L
Sbjct: 275 SDRDTAGYYIITASAGHDTTSASSAGAALALARDP-------DLFARVKADRNLLP---- 323
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ E +R T P+ R A + L I +++N + D + +P
Sbjct: 324 ----GIVEEAIRW--TTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEP 377
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F P R + + FG G +CLG +AR + + L LL
Sbjct: 378 RKFDPTRPANR----------HLAFGAGSHQCLGLHLARLEMRVLLDVLLDRV 420
Score = 52.7 bits (127), Expect = 3e-07
Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 26/163 (15%)
Query: 7 TEIVSDHKKN-TDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSL 65
+ ++ ++N TD D+ + A + SD + AG +TTS S
Sbjct: 246 AGLAAERRRNPTD---DVATVIAN---AVVD-GEPMSDRDTAGYYIITASAGHDTTSASS 298
Query: 66 SFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR 125
+ + L L R P + + + +L + E +R T P+ R
Sbjct: 299 AGAALALARDP-------DLFARVKADRNLLP--------GIVEEAIRW--TTPVQHFMR 341
Query: 126 -AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPER 167
A + L I +++N + D + +P F P R
Sbjct: 342 TAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR 384
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 64.6 bits (158), Expect = 4e-11
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 378 TRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILD 437
TR T ++ L +L L + G++TT NS++ VL L + P K++ +L
Sbjct: 247 TRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN-PAL-------- 297
Query: 438 RYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEH 496
+E + EI+R P+ R A+ S LG I + +++ +S RD E
Sbjct: 298 ------VETMVPEIIRW--QTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEV 349
Query: 497 WGDPDVFRPERFI---HPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
P+ F +R H + FG G RC+G +A L I +L F
Sbjct: 350 IDRPEEFIIDRPRPRQH------------LSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
Score = 51.1 bits (123), Expect = 8e-07
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 42 SDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 101
+ ++ L +L L + G++TT NS++ VL L + P K++ +L
Sbjct: 251 TPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN-PAL------------ 297
Query: 102 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 160
+E + EI+R P+ R A+ S LG I + +++ +S RD E P
Sbjct: 298 --VETMVPEIIRW--QTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRP 353
Query: 161 DVFRPER 167
+ F +R
Sbjct: 354 EEFIIDR 360
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 64.2 bits (157), Expect = 6e-11
Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 27/173 (15%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
T + + L + L + G T N+ L+ P E + L EP I R
Sbjct: 228 TLSEAVGLAVLLQIGGEAVT-NNSGQMFHLLLSRP-------ELAERLRSEPEIRPR--- 276
Query: 442 PYLEATIMEIMRH-GNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
I E++R + +G++ A++ + I + V+ + RD E + DP
Sbjct: 277 -----AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP 331
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D ER +P FG G C G +AR + + ++L
Sbjct: 332 DRIDFERSPNPHVS----------FGFGPHYCPGGMLARLESELLVDAVLDRV 374
Score = 51.1 bits (123), Expect = 7e-07
Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 22/147 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
D+ S + + + L + L + G T N+ L+ P
Sbjct: 213 DVTSLLGAA-----VGRDEITLSEAVGLAVLLQIGGEAVT-NNSGQMFHLLLSRP----- 261
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRH-GNTAPIGVAHRAMKTSRLGSYVIPQD 140
E + L EP I R I E++R + +G++ A++ + I
Sbjct: 262 --ELAERLRSEPEIRPR--------AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAG 311
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
+ V+ + RD E + DPD ER
Sbjct: 312 DAVYVSYLAANRDPEVFPDPDRIDFER 338
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 63.8 bits (156), Expect = 7e-11
Identities = 33/172 (19%), Positives = 69/172 (40%), Gaps = 30/172 (17%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+D++L L + +E + L+ +VL L+ +P +++ L ++P ++D
Sbjct: 212 SDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHP-------DQMALLREKPELID---- 260
Query: 442 PYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPD 501
+ E++RH + A+ R+ I ++ ++ + R D
Sbjct: 261 ----SATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRA-----PGD 311
Query: 502 VFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F R + + FG G C+G P+AR L + L +++ F
Sbjct: 312 RFDITR---EKATHM-------AFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
Score = 53.8 bits (130), Expect = 1e-07
Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 26/146 (17%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
++ + E A SD++L L + +E + L+ +VL L+ +P
Sbjct: 198 GMIGVIVREHGAE------ISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHP----- 246
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHRAMKTSRLGSYVIPQDS 141
+++ L ++P ++D + E++RH + A+ R+ I
Sbjct: 247 --DQMALLREKPELID--------SATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGD 296
Query: 142 IILVNLWSIMRDQEHWGDPDVFRPER 167
++ ++ + R D F R
Sbjct: 297 VLTCSMLATNRA-----PGDRFDITR 317
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 63.9 bits (156), Expect = 7e-11
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
D + + + AG +TTS+S +++ L R P E++ +P ++
Sbjct: 253 DDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNP-------EQLALAKSDPALIP---- 301
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
+ E +R TAP+ R A+ + + I + I+++ S RD+E + +P
Sbjct: 302 ----RLVDEAVRW--TAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNP 355
Query: 501 DVFRPERFIHPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
D F RF + + FG G CLG+ +A+ + IF LL
Sbjct: 356 DEFDITRFPNR----------HLGFGWGAHMCLGQHLAKLEMKIFFEELLPKL 398
Score = 50.0 bits (120), Expect = 1e-06
Identities = 31/147 (21%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
D++S ++ + + D + + + AG +TTS+S +++ L R P
Sbjct: 237 DVMSLLAN---SKLDG-NYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNP----- 287
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQD 140
E++ +P ++ + E +R TAP+ R A+ + + I +
Sbjct: 288 --EQLALAKSDPALIP--------RLVDEAVRW--TAPVKSFMRTALADTEVRGQNIKRG 335
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
I+++ S RD+E + +PD F R
Sbjct: 336 DRIMLSYPSANRDEEVFSNPDEFDITR 362
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 58.9 bits (143), Expect = 3e-09
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 382 TDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKC 441
+DD+ ++ L +AG+ETT NS++ ++ +P ++
Sbjct: 254 SDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVR--------------- 298
Query: 442 PYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDP 500
E EI+R P+ R A++ L I + +++ S D+E + DP
Sbjct: 299 --PETAADEIVRW--ATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDP 354
Query: 501 DVFRPERFI--HPTSGEVLYDETLIPFGLGKRRCLGEPMARTSLFIFLSSLLYHF 553
F R H G G G C+G +AR ++ + +++ H
Sbjct: 355 FTFNILRNPNPHVGFG-----------GTGAHYCIGANLARMTINLIFNAVADHM 398
Score = 50.8 bits (122), Expect = 9e-07
Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 24/147 (16%)
Query: 22 DLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHVQRK 81
D+V+ I+ A + SDD+ ++ L +AG+ETT NS++ ++ +P
Sbjct: 238 DIVTQLIQ---ADID-GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWEL 293
Query: 82 IQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAHR-AMKTSRLGSYVIPQD 140
++ E EI+R P+ R A++ L I +
Sbjct: 294 YKKVR-----------------PETAADEIVRW--ATPVTAFQRTALRDYELSGVQIKKG 334
Query: 141 SIILVNLWSIMRDQEHWGDPDVFRPER 167
+++ S D+E + DP F R
Sbjct: 335 QRVVMFYRSANFDEEVFQDPFTFNILR 361
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 54.1 bits (129), Expect = 1e-07
Identities = 71/551 (12%), Positives = 153/551 (27%), Gaps = 155/551 (28%)
Query: 192 LELLTDGLKKLYVTKILGFRDDEMCAATVLFEAQFLDFMRSYGQDSVEDASIHKYGLFSL 251
++ L K + I+ +D LF + S ++ V+ +
Sbjct: 39 QDMPKSILSKEEIDHIIMSKDAVS-GTLRLF-----WTLLSKQEEMVQKF---------V 83
Query: 252 VSVLGEDW-WLVLRCGHTYLDERKVCQVPTQPNLKKYLYANLVSLGGGLPCDPEDVKNNE 310
VL ++ +L+ + + P+ + Y+ +V +
Sbjct: 84 EEVLRINYKFLMSPI-------KTEQRQPS-MMTRMYIEQRDRLYNDNQVFAKYNV-SRL 134
Query: 311 DKIYSIAKR------------YGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFE 358
+ + G + +G++ + + + + +
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKT------WVA--LDVCLSYK-----VQCKMD 181
Query: 359 TSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDLFMAGSETTSNSLSFSVLYLIRYPHV 418
+ W +N+K + + +L +L L ++ S
Sbjct: 182 FKIFW-------LNLKNC----NSPETVLEMLQKLLYQIDPNWTSRSDHS----SNIKLR 226
Query: 419 QRKIQEEIDSLNKEPTILDRYKCPYLEATIMEIMRHGNTAPIGVAH-RAMKTSRLGSYVI 477
IQ E+ L K PY + ++ + V + +A L
Sbjct: 227 IHSIQAELRRLLKSK--------PYENCLL--VLLN-------VQNAKAWNAFNLSCK-- 267
Query: 478 PQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVLY----DETL---------IP 524
IL+ R + D H + DE P
Sbjct: 268 -----ILL----TTRFK---QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 525 FGLGKRRCLGEPMARTSLFIFLSSLLYHF-NISIPSDEPLPAV--TVLDGVTLAPAPYKA 581
L + P + + + L + N + + L + + L+ L PA Y+
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN--VLEPAEYR- 372
Query: 582 PGELYPKQMRFSEKLSVFLLSYSPLDFWITGPLLNLFKKSHRLNVPGPSWLPVVGCYLEF 641
+++ ++LSVF P I LL+L W V+ +
Sbjct: 373 --KMF-------DRLSVF-----PPSAHIPTILLSLI------------WFDVI--KSDV 404
Query: 642 SRLLSKF-KYHYLVCENYARRYGPITGLRL-----GRDRI----ILVSGFKAVREVLTRD 691
+++K KY + + I + L + +V + + + D
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTIS-IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 692 EFDGRPSGYFF 702
YF+
Sbjct: 464 LIPPYLDQYFY 474
Score = 48.7 bits (115), Expect = 7e-06
Identities = 74/491 (15%), Positives = 141/491 (28%), Gaps = 152/491 (30%)
Query: 11 SDHKKNTDKFYDLVSAYIEE-MKARSNKTSSFSDDQLLVL-------LLDLFMAGSE--- 59
SDH N + A + +K++ + LLVL + F +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENC------LLVLLNVQNAKAWNAFNLSCKILL 270
Query: 60 TTSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPT--ILDRYKCPYLEATIMEIMRHGNT 117
TT L H+ + +L + +L +Y L+ ++
Sbjct: 271 TTRFKQVTDFLSAATTTHI--SLDHHSMTLTPDEVKSLLLKY----LDCRPQDL------ 318
Query: 118 APIGVAHRAMKTSRLGSYVIPQDSIILVNLWSIMRDQEHWGDPDVFRPERFIHPTSGEVL 177
P + T+ + SII +RD + + H ++
Sbjct: 319 -P----REVLTTNPR---RL---SII----AESIRD-----GLA--TWDNWKHVNCDKL- 355
Query: 178 YDETLIPFGLDPGYLELLTDGLKKLYVTKILG-FRDDEMCAATVLFEAQFLDFMRSYGQD 236
T+I L+ L +K++ L F L +
Sbjct: 356 --TTIIESSLN----VLEPAEYRKMF--DRLSVFPPS------AHIPTILLSLIWFDVIK 401
Query: 237 SVEDASIHKYGLFSLVSVLGEDWWLVLRCG-HT-YLDERKVCQVPTQPNLKKYLYANLVS 294
S ++K +SLV E + YL+ + + + L+ ++V
Sbjct: 402 SDVMVVVNKLHKYSLV----EKQPKESTISIPSIYLELKV------KLENEYALHRSIV- 450
Query: 295 LGGGLPCDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIG 354
D Y+I K + +S+ + Y+ Y Y IG
Sbjct: 451 ----------------DH-YNIPKTF------DSDD---LIPPYLDQYF------YSHIG 478
Query: 355 DSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVLLLDL-FM------AGSETTSNSLSF 407
+ ++ L R + LD F+ + ++
Sbjct: 479 HHLKNIEHPERMTLF---------RM--------VFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 408 SVLY-LIRY--------PHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEI-MRHGNT 457
+ L L Y P +R + +D L K L K ++ I + +
Sbjct: 522 NTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY----TDLLRIALMAEDE 577
Query: 458 APIGVAHRAMK 468
A AH+ ++
Sbjct: 578 AIFEEAHKQVQ 588
Score = 30.6 bits (68), Expect = 2.4
Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 22/129 (17%)
Query: 1 MWRADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTSSFSDDQLLVLLLDLFMAGSET 60
+ + E ++ + F D ++E+ K R + T+ + +L L L
Sbjct: 481 LKNIEHPERMTLFRM---VFLDF--RFLEQ-KIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 61 TSNSLSFSVLYLIRYPHVQRKIQEEIDSLNKEPTILDRYKCPYLEATIMEI-MRHGNTAP 119
N P +R + +D L K L K ++ I + + A
Sbjct: 535 CDND-----------PKYERLVNAILDFLPKIEENLICSKY----TDLLRIALMAEDEAI 579
Query: 120 IGVAHRAMK 128
AH+ ++
Sbjct: 580 FEEAHKQVQ 588
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme,
pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter
freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A
2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Length = 456
Score = 31.2 bits (70), Expect = 1.3
Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 13/90 (14%)
Query: 279 PTQPNLKKYLYANLVSLGGGLPCDPEDVKNNEDKIYSIAKRYGGIP--------AGESNG 330
N+ A V+L GG P +++ + + + + GI +
Sbjct: 170 KGAENIAYICLAVTVNLAGGQPVSMANMR----AVRELTEAH-GIKVFYDATRCVENAYF 224
Query: 331 RRGYMLTYIIAYIRDFACDYYFIGDSFETS 360
+ + I + + + D S
Sbjct: 225 IKEQEQGFENKSIAEIVHEMFSYADGCTMS 254
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 29.7 bits (66), Expect = 2.4
Identities = 9/50 (18%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 3 RADKTEIVSDHKKNTDKFYDLVSAYIEEMKARSNKTS--SF---SDDQLL 47
+ + E KK+ +++ S +E+ K +N+ + +F D ++
Sbjct: 106 KVMEQEWREKAKKDLEEWNQRQSEQVEKNKI-NNRIADKAFYQQPDADII 154
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease,
hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe}
PDB: 4fcx_B*
Length = 417
Score = 29.5 bits (65), Expect = 3.9
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 336 LTYIIAYIRDFACDYYFI-GDSFETSVPWDKTVLLCINVKKRLTRECTDDQLLVL 389
I+ R+ D + GD F + P K + + + +L +L
Sbjct: 41 FNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCELELL 95
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.141 0.431
Gapped
Lambda K H
0.267 0.0450 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 11,272,335
Number of extensions: 702194
Number of successful extensions: 2044
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1714
Number of HSP's successfully gapped: 199
Length of query: 711
Length of database: 6,701,793
Length adjustment: 100
Effective length of query: 611
Effective length of database: 3,909,693
Effective search space: 2388822423
Effective search space used: 2388822423
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.0 bits)