RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14422
(529 letters)
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 402 bits (1036), Expect = e-136
Identities = 112/478 (23%), Positives = 195/478 (40%), Gaps = 16/478 (3%)
Query: 58 TLRKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINI 117
+IP P + + +K+H + F+ +G I+RE L N + +
Sbjct: 7 PFNEIPSPGDNGWLNLYHF----WRETGTHKVHLHHVQNFQKYGPIYRE-KLGNVESVYV 61
Query: 118 LDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTP 177
+D +D+ L+ + P R Y + +G++ ++ W R L
Sbjct: 62 IDPEDVALLF--KSEGPNPERFLIPPWVAYHQYY---QRPIGVLLKKSAAWKKDRVALNQ 116
Query: 178 ELTSGRIMNRFLPELNRVAEDFNSLIRHH---SCENHSVLCFDELANRMGLESACTLILG 234
E+ + FLP L+ V+ DF S++ + + + R ES +I G
Sbjct: 117 EVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFG 176
Query: 235 KRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLP-FWKLFPTPAYLKLIKSEDAIYDI 293
+R G L E ++P + A+ + F S P ++LF T + + + D I+
Sbjct: 177 ERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSK 236
Query: 294 ISRYVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLV 353
Y + S+ D + + +L + D K + + +A G+ T TL
Sbjct: 237 ADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQ 296
Query: 354 FVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIAR 413
+ LY +A+N Q+ + E++ Q +Q LKA I+E+ RL P + + R
Sbjct: 297 WHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQR 356
Query: 414 ITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFG 473
L L Y IPA +++ + + F + F P RWL ++ F FG
Sbjct: 357 YLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFG 416
Query: 474 VGRRICPGKRFTELELKVCLASIVREFKVGFNGT--LNLEFEFLLTPTSPTSFIFEPR 529
G R C G+R ELE+ + L +++ F+V + F +L P P SF F P
Sbjct: 417 WGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWPF 474
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 396 bits (1020), Expect = e-134
Identities = 115/475 (24%), Positives = 209/475 (44%), Gaps = 17/475 (3%)
Query: 58 TLRKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINI 117
+ +PGP + G+ F L K H++ + K +G+IFR L +F +++
Sbjct: 22 NVTDLPGPTNWPLLGSLLEI---FWKGGLKKQHDTLAEYHKKYGQIFRM-KLGSFDSVHL 77
Query: 118 LDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTP 177
L + S P R + YR R + Y GL+ +G+ W +R+
Sbjct: 78 GSPSLLEALY--RTESAHPQRLEIKPWKAYRDHRNEAY---GLMILEGQEWQRVRSAFQK 132
Query: 178 ELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRL 237
+L + + ++N V DF + E + N+ ES C ++ KR
Sbjct: 133 KLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRF 192
Query: 238 GFLGEDIDPIMTKLAVAVREQF-IASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISR 296
G L ++ + A++ + + K T + + D I+ +
Sbjct: 193 GLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKP 252
Query: 297 YVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVL 356
+D L D I + ++ A+ + A ++T N+L+++L
Sbjct: 253 CIDNRLQRYSQQPGAD-----FLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWIL 307
Query: 357 YLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARITE 416
Y +++N Q ++ +E+ +V +Q ++++N YLKAC++ES RL P+ P R +
Sbjct: 308 YNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLD 367
Query: 417 TPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVGR 476
P L Y +P G+VL +T E NF + +FRPERWL +E + N F PFG+G+
Sbjct: 368 KPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHLPFGIGK 427
Query: 477 RICPGKRFTELELKVCLASIVREFKVGF-NGT-LNLEFEFLLTPTSPTSFIFEPR 529
R+C G+R EL+L + L I++++ + + + + +L P+ F PR
Sbjct: 428 RMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIAFRPR 482
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 208 bits (532), Expect = 3e-61
Identities = 96/528 (18%), Positives = 180/528 (34%), Gaps = 61/528 (11%)
Query: 21 YLSIPDTSTIFILALLLSLVLCATFVKSLKQTGPYFDTLRKIPGPRSIYYFGNRWMYYSW 80
+ +I + A + ++L + ++ IPGP G
Sbjct: 10 HYNITSIVPEAMPAATMPVLLLTGLFLLVW----NYEGTSSIPGPGYCMGIGPLIS---- 61
Query: 81 FGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPP 140
G + + + +++G+ R ++ + I +F ++ + S
Sbjct: 62 HGRFLWMGIGSACNYYNRVYGEFMRV-WISGEETLIISKSSSMFHIMKHNHYSSRF---- 116
Query: 141 NEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFN 200
S + + N E+W R L+ + R + +
Sbjct: 117 ---GSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGP-GLVRMVTVCAESLKTHL 172
Query: 201 SLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFI 260
+ + E+ V L R+ L+++ TL L +D + +
Sbjct: 173 DRLEEVTNESGYVDVLTLL-RRVMLDTSNTLFLRI-------PLDESAIVVKIQGYFDAW 224
Query: 261 ASRDTCFGLPFWKLFPTPAYLKLIKS----EDAIYDIISRYVDEALADEEDTCSLDTDVQ 316
+ P + Y K KS +DAI +I+ +E+ +D
Sbjct: 225 QAL---LIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMD---- 277
Query: 317 TVFMSIL-------NAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKI 369
F + L + ++ I++ + A T +L F+L+LIAK+ +E I
Sbjct: 278 --FATELILAEKRGDLTRENVNQC---ILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAI 332
Query: 370 YEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARITETPLELSGYQIPAG 429
+EI V G +D +IQ K ++ I ES R P + R + GY + G
Sbjct: 333 IKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKG 391
Query: 430 SVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVGRRICPGKRFTELEL 489
+ ++ + FP+ EF E + + F PFG G R C GK + +
Sbjct: 392 TNIILNIG-RMHRLEFFPKPNEFTLENFA-KNVPYRYFQ--PFGFGPRGCAGKYIAMVMM 447
Query: 490 KVCLASIVREFKVGFNGT-----LNLEFEFLLTPTSPTSFI---FEPR 529
K L +++R F V + + L P + + F PR
Sbjct: 448 KAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPR 495
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 193 bits (492), Expect = 6e-56
Identities = 83/455 (18%), Positives = 161/455 (35%), Gaps = 39/455 (8%)
Query: 89 LHESYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEVTSYYR 148
L + + D K +G + R +F+ + + + + L ++ +K + YR
Sbjct: 12 LQDVFLDWAKKYGPVVRV-NVFHKTSVIVTSPESVKKFLMSTKYNKD--------SKMYR 62
Query: 149 KSRPDRYTNL---GLV-NEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIR 204
+ L GLV E WH R + + + + N AE ++
Sbjct: 63 ALQTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSR-SSLVSLMETFNEKAEQLVEILE 121
Query: 205 HHSCENHSVLCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRD 264
+ V D L ++ G L P+ AV+
Sbjct: 122 AKADGQTPVSMQDML-TYTAMDILAKAAFGMETSMLLGAQKPLSQ----AVKLMLEGITA 176
Query: 265 TCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVDE--ALADEEDTCSLDTDVQTVFMSI 322
+ L + ++ +S + + +V + D ++
Sbjct: 177 SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPAD------ILTQ 230
Query: 323 L------NAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINV 376
+ D + D + F AG +T N L F + +++ ++ E+ V
Sbjct: 231 ILKAEEGAQDDEGLLDN---FVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEV 287
Query: 377 AGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHT 436
G + +++ +YL ++ES RL P A R+ E + G ++P + LL T
Sbjct: 288 IGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFST 347
Query: 437 WQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASI 496
+ + F F P+R+ K +F PF +G R C G++F ++E+KV +A +
Sbjct: 348 YVMGRMDTYFEDPLTFNPDRFGPGAP-KPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKL 406
Query: 497 VREFKVGF--NGTLNLEFEFLLTPTSPTSFIFEPR 529
++ + L+ + L P P PR
Sbjct: 407 LQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPR 441
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 190 bits (485), Expect = 6e-55
Identities = 66/484 (13%), Positives = 159/484 (32%), Gaps = 60/484 (12%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYK-LNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRD 121
G+ + P + ++ + D+ L V+ +
Sbjct: 8 RVSGGHDEHGHLEEF--RTDPIGLMQRVRDELGDVGTF--------QLAGKQVVLLSGSH 57
Query: 122 DLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNL----GLVNEQGEIWHLLRTRLTP 177
A +++ + G+V +
Sbjct: 58 ANEFFFRAGDD-------------DLDQAKAYPFMTPIFGEGVVFD-ASPERRKEMLHNA 103
Query: 178 ELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRL 237
L G M + +I E + D A + + ++ ++GK+
Sbjct: 104 ALR-GEQMKGHAATIEDQVRR---MIADWG-EAGEIDLLDFFA-ELTIYTSSACLIGKKF 157
Query: 238 GFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRY 297
+ +D KL + + + P ++ + ++ + + +++
Sbjct: 158 R---DQLDGRFAKLYHELERGTDPL----AYVDPY--LPIESFRRRDEARNGLVALVADI 208
Query: 298 VDEALADEEDTCSLDTDVQTVFMSILNA------PDVDIRDKKGAIIDFIAAGIKTFGNT 351
++ +A+ S D D+ V +++ +I I + AG T T
Sbjct: 209 MNGRIANPPTDKS-DRDMLDVLIAVKAETGTPRFSADEITGM---FISMMFAGHHTSSGT 264
Query: 352 LVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQI 411
+ L + ++ + +E+ + G + + ++ L+ ++E+ RL P +
Sbjct: 265 ASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIIL 324
Query: 412 ARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEK--NKFLV 469
R+ + E+ G++I G ++ + +FP +F P R+ E N++
Sbjct: 325 MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTW 384
Query: 470 CPFGVGRRICPGKRFTELELKVCLASIVREFKV----GFNGTLNLEFEFLLTPTSPTSFI 525
PFG GR C G F +++K + ++RE++ N + ++ P +
Sbjct: 385 IPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVR 444
Query: 526 FEPR 529
+ R
Sbjct: 445 YRRR 448
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 188 bits (480), Expect = 2e-54
Identities = 83/478 (17%), Positives = 169/478 (35%), Gaps = 66/478 (13%)
Query: 54 PYFDTLRKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFP 113
++L PG + + G + + K + + +FK LF
Sbjct: 6 TNLNSLPIPPGDFGLPWLGETLNFLN--DGDFGKKRQQQFGPIFKTR--------LFGKN 55
Query: 114 VINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNL----GLVNEQGEIWH 169
VI I + ++ + P L L + GEI
Sbjct: 56 VIFISGALANRFLFTKEQE-------------TFQATWPLSTRILLGPNALATQMGEIHR 102
Query: 170 LLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESAC 229
R L + + +LP+++ + + + + + V+ + + RM + A
Sbjct: 103 SRRKILYQAFLPRTL-DSYLPKMDGIVQ---GYLEQWG-KANEVIWYPQ-LRRMTFDVAA 156
Query: 230 TLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDA 289
TL F+GE + + F F LP P + K ++
Sbjct: 157 TL-------FMGEKVSQNP-----QLFPWFETYIQGLFSLPIP--LPNTLFGKSQRARAL 202
Query: 290 IYDIISRYVDEALADEEDTCSLDTDVQTVFMSILNA-----PDVDIRDKKGAIIDFIAAG 344
+ + + + D + ++ + +++D+ I+ + AG
Sbjct: 203 LLAELEKIIKARQQQPPSE----EDALGILLAARDDNNQPLSLPELKDQ---ILLLLFAG 255
Query: 345 IKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRL 404
+T + L L+ +++ +E++ +E + Q+ T + ++ YL ++E RL
Sbjct: 256 HETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS-QELTAETLKKMPYLDQVLQEVLRL 314
Query: 405 LPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEK 464
+P R + G+ P G ++ Q D +P ++F PER+ + +
Sbjct: 315 IPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSAT 374
Query: 465 NK----FLVCPFGVGRRICPGKRFTELELKVCLASIVREFKVGFNGTLNLEFEFLLTP 518
+ + PFG G R C GK F LE+K+ ++++F NLE +P
Sbjct: 375 HNPPFAHV--PFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSP 430
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 182 bits (465), Expect = 5e-52
Identities = 81/459 (17%), Positives = 171/459 (37%), Gaps = 53/459 (11%)
Query: 56 FDTLRKIPG-PRSIYYFGNRWMYYSWFGPYK-LNKLHESYQDLFKMFGKIFREEYLFNFP 113
++ P I + G+ + P + L +E Y +F +
Sbjct: 7 PAGVKSPPYIFSPIPFLGHAIAF--GKSPIEFLENAYEKYGPVFSF--------TMVGKT 56
Query: 114 VINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLG---LVNEQGEIWHL 170
+L D L+ + Y R + P G + ++
Sbjct: 57 FTYLLGSDAAALLFNSKNED-LNAED-----VYSRLTTPV----FGKGVAYDVPNPVFLE 106
Query: 171 LRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACT 230
+ L L + + + + +++ E+ F+ L+ + + +A
Sbjct: 107 QKKMLKSGLN-IAHFKQHVSIIEKETKEY---FESWG-ESGEKNVFEALS-ELIILTASH 160
Query: 231 LILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAI 290
+ GK + ++ + +L + F + + LP W P P++ + ++ I
Sbjct: 161 CLHGKEIR---SQLNEKVAQLYADLDGGFSHAA---WLLPGW--LPLPSFRRRDRAHREI 212
Query: 291 YDIISRYVDEALADEEDTCSLDTDVQTVFMSILNA-----PDVDIRDKKGAIIDFIAAGI 345
DI + + + +E D+ + D ++ +I + AG
Sbjct: 213 KDIFYKAIQKRRQSQEK----IDDILQTLLDATYKDGRPLTDDEVAGM---LIGLLLAGQ 265
Query: 346 KTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQD-FTTKNIQNAKYLKACIEESFRL 404
T T ++ + +A++ T Q+K Y E V G + T +++ L CI+E+ RL
Sbjct: 266 HTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRL 325
Query: 405 LPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEK 464
P + R+ TP ++GY IP G + + ++ + +F P+R+L +
Sbjct: 326 RPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPAS 385
Query: 465 -NKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFKV 502
KF PFG GR C G+ F +++K ++++R ++
Sbjct: 386 GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 182 bits (464), Expect = 7e-52
Identities = 77/461 (16%), Positives = 161/461 (34%), Gaps = 63/461 (13%)
Query: 58 TLRKIP-GPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVIN 116
LR+ P + G+ W P + D+ ++ L V
Sbjct: 20 ELREPPVAGGGVPLLGHGWRL--ARDPLAFMSQLRDHGDVVRI--------KLGPKTVYA 69
Query: 117 ILDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYT-----NLGLVNEQGEIWHLL 171
+ + + + Y+ G+ G +
Sbjct: 70 VTNPELTGALALNPD--------------YHIAGPLWESLEGLLGKEGVATANGPLHRRQ 115
Query: 172 RTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTL 231
R + P + + P + A + +V E R+ + A
Sbjct: 116 RRTIQPAFR-LDAIPAYGPIMEEEAHALTERWQ----PGKTVDATSES-FRVAVRVAARC 169
Query: 232 ILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIY 291
+L + E + + LA R + G + P PA + + ++
Sbjct: 170 LLRGQYM--DERAERLCVALATVFRGMYRRMVVP-LGPLYR--LPLPANRRFNDALADLH 224
Query: 292 DIISRYVDEALADEEDTCSLDTDVQTVFMSIL-NA--------PDVDIRDKKGAIIDFIA 342
++ + E A + D ++ L A + +I D+ ++ +
Sbjct: 225 LLVDEIIAERRASGQK----PDD----LLTALLEAKDDNGDPIGEQEIHDQ---VVAILT 273
Query: 343 AGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESF 402
G +T +T++++L +A + ++I +E+ V G + ++++ ++ I E+
Sbjct: 274 PGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGNVIVEAM 332
Query: 403 RLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEET 462
RL P + R EL GY+IPAG+ ++ + D ++ EF P+RWL E
Sbjct: 333 RLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA 392
Query: 463 EK-NKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFKV 502
K+ + PF G+R CP F+ +L + A++ +++
Sbjct: 393 ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 172 bits (437), Expect = 3e-48
Identities = 73/458 (15%), Positives = 146/458 (31%), Gaps = 64/458 (13%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDD 122
P ++ G+ + P + E + ++ IF + V + D +
Sbjct: 7 VYPVTVPILGHIIQF--GKSPLGF--MQECKR---QLKSGIFTI-NIVGKRVTIVGDPHE 58
Query: 123 LFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLG-------LVNEQGEIWHLLRTRL 175
Y+ + L
Sbjct: 59 HSRFFLPRNE-------------VLSPREV--YSFMVPVFGEGVAYAAPYPRMREQLNFL 103
Query: 176 TPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGK 235
ELT F+P + F + + + + ++ + M + +AC + G+
Sbjct: 104 AEELT-IAKFQNFVPAIQHEVRKF--MAANWDKDEGEINLLEDCS-TMIINTACQCLFGE 159
Query: 236 RLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIIS 295
L + +D + A + + + LP P P + ++ + I+S
Sbjct: 160 DLR---KRLDA--RRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILS 214
Query: 296 RYVDEALADEEDTCSLDTDVQTVFMSIL-NA--------PDVDIRDKKGAIIDFIAAGIK 346
+ +E + S +D +S L +A ++ I+ + AG
Sbjct: 215 EIIIARKEEEVNKDSSTSD----LLSGLLSAVYRDGTPMSLHEVCGM---IVAAMFAGQH 267
Query: 347 TFGNTLVFVLYLIAKNTTC--QEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRL 404
T T + + + E + +EI + + + C ES R
Sbjct: 268 TSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNV--MDEMPFAERCARESIRR 325
Query: 405 LPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEK 464
P + R +++ Y +P G ++ C + DE FP+ + + PER EK
Sbjct: 326 DPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD-----EK 380
Query: 465 NKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFKV 502
+ FG G C G++F L++K LA+ R +
Sbjct: 381 VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 172 bits (437), Expect = 7e-48
Identities = 69/505 (13%), Positives = 138/505 (27%), Gaps = 73/505 (14%)
Query: 63 PGPRSIY-YFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRD 121
P + Y G + E + + G +F L V I +
Sbjct: 16 PLENGLIPYLGCALQF--------GANPLEFLRANQRKHGHVFTC-KLMGKYVHFITNPL 66
Query: 122 DLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPELTS 181
VL + ++ + + + + G + L
Sbjct: 67 SYHKVLCHGKYFDW--------KKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQG 118
Query: 182 GRIMNRFLPELNRVAEDFNSLIRHHSC---ENHSVLCFDELANRMGLESACTLILGKRLG 238
+N + + + + + M E+ I G+ L
Sbjct: 119 HA-LNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM-FEAGYLTIFGRDLT 176
Query: 239 FLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYV 298
I+ L + F L P + + + + + +
Sbjct: 177 RRDTQKAHILNNL-----DNFKQFDKVFPALVAG--LPIHMFRTAHNAREKLAESLRHEN 229
Query: 299 DE--ALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVL 356
+ E + + + D++ + + A + L
Sbjct: 230 LQKRESISELISLRMFLNDTLSTFD-----DLEKAK---THLVVLWASQANTIPATFWSL 281
Query: 357 YLIAKNTTCQEKIYEEIINV----------AGPHQDFTTKNIQNAKYLKACIEESFRLLP 406
+ + +N + EE+ G + + + L + I+ES RL
Sbjct: 282 FQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS 341
Query: 407 TAPQIARI----TETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEET 462
+ R LE Y I ++ + LD +P F+ +R+L E
Sbjct: 342 ASL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENG 400
Query: 463 EKNKFLVC----------PFGVGRRICPGKRFTELELKVCLASIVREFKVGF-NGT---- 507
+ C PFG G ICPG+ F E+K L ++ F++ G
Sbjct: 401 KTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCP 460
Query: 508 -LNLEFEFLLT--PTSPTSFIFEPR 529
L+ L P + F ++ +
Sbjct: 461 PLDQSRAGLGILPPLNDIEFKYKFK 485
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 170 bits (434), Expect = 1e-47
Identities = 88/460 (19%), Positives = 167/460 (36%), Gaps = 52/460 (11%)
Query: 58 TLRKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINI 117
T++++P P++ N + +K ++ + G+IF+ +
Sbjct: 1 TIKEMPQPKTFGELKNLPLL-------NTDKPVQALMKIADELGEIFKF-EAPGRVTRYL 52
Query: 118 LDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTP 177
+ + S K ++ + R L + W L P
Sbjct: 53 SSQRLIKEACDESRFDK-------NLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLP 105
Query: 178 ELTSGRIMNRFLPELNRVAEDF-NSLIRHHSCENHSVLCFDELANRMGLESACTLILGKR 236
S + M + + +A R ++ + + +++ R+ L++ R
Sbjct: 106 SF-SQQAMKGYHAMMVDIAVQLVQKWERLNA--DEHIEVPEDM-TRLTLDTIGLCGFNYR 161
Query: 237 LG-FLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIIS 295
F + P +T + A+ E ++ + + + D++
Sbjct: 162 FNSFYRDQPHPFITSMVRALDEAM--NKLQRANPDDP--AYDENKRQFQEDIKVMNDLVD 217
Query: 296 RYVDEALADEEDTCSLDTDVQTVFMSI-LNAPD---------VDIRDKKGAIIDFIAAGI 345
+ + + A E S D ++ LN D +IR + II F+ AG
Sbjct: 218 KIIADRKASGEQ--SDD------LLTHMLNGKDPETGEPLDDENIRYQ---IITFLIAGH 266
Query: 346 KTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLL 405
+T L F LY + KN +K EE V + K ++ KY+ + E+ RL
Sbjct: 267 ETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV-DPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 406 PTAPQIARITETPLELSG-YQIPAGSVLLCHTWQACLDEANFPQ-AQEFRPERWLGEETE 463
PTAP + + L G Y + G L+ Q D+ + +EFRPER+
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 464 -KNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFKV 502
++ F PFG G+R C G++F E + L +++ F
Sbjct: 386 PQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 168 bits (428), Expect = 1e-46
Identities = 81/487 (16%), Positives = 141/487 (28%), Gaps = 63/487 (12%)
Query: 46 VKSLKQTGPYFDTLRKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGK-IF 104
+ +TG +R IPG + G + +F E ++ + + ++
Sbjct: 14 LTVATRTGSKDLPIRNIPGNYGLPIVGPIKDRWDYF---YDQGAEEFFKSRIRKYNSTVY 70
Query: 105 REE------YLFNFPVINILDRDDLFLVLGASARSK-----FPLRPPNEVTSYYRKSRPD 153
R N V+ +LD ++ K P E+T YR
Sbjct: 71 RVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKKDLLTGTYMPSTELTGGYR----- 125
Query: 154 RYTNLGLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSV 213
+ + E H L L NR PE + +
Sbjct: 126 ----ILSYLDPSEPKHEKLKNLLFFLLKSS-RNRIFPEFQATYSELFDSLEKELSLKGKA 180
Query: 214 LCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWK 273
G +P TKL
Sbjct: 181 DFGGSSD-GTAFNFLARAFYG---------TNPADTKLKADAPGLITKWVLFNLHPLLSI 230
Query: 274 LFPTPAYLKLIKSEDAIYDIISRYVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRDK 333
P LI + ++ L IL D +
Sbjct: 231 GLPRVIEEPLIHTFSLPPALVKSDYQR----------LYEFFLESAGEILVEADKLGISR 280
Query: 334 KGAIIDFIAAGIKTFGNTLVFVLYLIAK-----NTTCQEKIYEEIINVAGPHQ-DFTTKN 387
+ A + + A + + + K ++ EEI +V + + T
Sbjct: 281 EEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGA 340
Query: 388 IQNAKYLKACIEESFRLLPTAPQIARITETPLEL----SGYQIPAGSVLLCHTWQACLDE 443
I+ + K+ + E R P + L + + +++ AG +L + A D
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDP 400
Query: 444 ANFPQAQEFRPERWLGEETEK-NKFLVCPFG-------VGRRICPGKRFTELELKVCLAS 495
F +A EF PER++GEE EK + ++ G VG + C GK F L ++ +
Sbjct: 401 KIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIE 460
Query: 496 IVREFKV 502
I R +
Sbjct: 461 IFRRYDS 467
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 161 bits (410), Expect = 6e-44
Identities = 61/472 (12%), Positives = 125/472 (26%), Gaps = 55/472 (11%)
Query: 90 HESYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRK 149
+ + G IF + V +LD V+ R++ Y
Sbjct: 41 ASFLTRMKEKHGDIFTI-LVGGRYVTVLLDPHSYDAVVWEP-RTRLDFHA------YAIF 92
Query: 150 SRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCE 209
+ + ++ L + +
Sbjct: 93 LMERIFDVQLPHYSPSDEKARMKLTLLHRELQALTEAMY----TNLHAVLLGDATEAGSG 148
Query: 210 NHSVLCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGL 269
H + D L + + G + + V F
Sbjct: 149 WHEMGLLDFS-YSFLLRAGYLTLYGIEALPRTHESQAQDRVHSADVFHTF---------R 198
Query: 270 PFWKLFPTPAYLKLIKSEDAIYDIISRYVDEALADE-EDTCSLDTDVQTVFMSILNAPDV 328
+L P A L + + + + L+ + + ++ L V
Sbjct: 199 QLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKWLESYLLHLEEMGV 258
Query: 329 DIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAG-------PHQ 381
+ A++ + A G ++L + KN + E+ ++
Sbjct: 259 SEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTT 318
Query: 382 DFTTKNIQNAKYLKACIEESFRLLPTAPQIARITETPLELS-----GYQIPAGS-VLLCH 435
K + + L + + ES RL AP I R L + + + G +LL
Sbjct: 319 TLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLFP 377
Query: 436 TWQACLDEANFPQAQEFRPERWLGEE-TEKNKFLVC---------PFGVGRRICPGKRFT 485
D + + F+ R+L + +EK F P+G G C G+ +
Sbjct: 378 FLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYA 437
Query: 486 ELELKVCLASIVREFKVGFNGT--------LNLEFEFLLTPTSPTSFIFEPR 529
+K + ++ + L+ L+ P + R
Sbjct: 438 VNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRYRIR 489
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 151 bits (383), Expect = 8e-41
Identities = 61/450 (13%), Positives = 124/450 (27%), Gaps = 75/450 (16%)
Query: 60 RKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILD 119
+IP +S+ N + N+ DLF+ L I +
Sbjct: 3 EQIPHDKSL---DNSLTLLKEGYLFIKNRTERYNSDLFQA--------RLLGKNFICMTG 51
Query: 120 RDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPEL 179
+ + + P S + + + G + L L
Sbjct: 52 AEAAKVFYDTDRFQRQNALPKRVQKSLFGVN--------AIQGMDGSAHIHRK-MLFLSL 102
Query: 180 TSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGF 239
+ R + + + + V+ F+E A + AC
Sbjct: 103 MTPPHQKRLAELMTEEWKA---AVTRWE-KADEVVLFEE-AKEILCRVACYW-------A 150
Query: 240 LGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVD 299
+ + + A + + P + K ++ + I ++
Sbjct: 151 GVPLKETEVKERADDFID-----------MVDAFGAVGPRHWKGRRARPRAEEWIEVMIE 199
Query: 300 EALADEEDTCSLDTDVQTVFMSILNAPDVD----IRDKKGAIIDFIAAGIKTFGNTLVFV 355
+A A T S + D + + I LVF
Sbjct: 200 DARAGLLKTTSGT-----ALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFS 254
Query: 356 LYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARIT 415
+ ++ +E + N++ + ++E R P P + +
Sbjct: 255 ALALHEHPKYKEWLRSG-----------------NSREREMFVQEVRRYYPFGPFLGALV 297
Query: 416 ETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVG 475
+ + + G+ +L + D + EFRPER+ E + P G G
Sbjct: 298 KKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMI--PQGGG 355
Query: 476 R----RICPGKRFTELELKVCLASIVREFK 501
CPG+ T +K L +V + +
Sbjct: 356 HAEKGHRCPGEGITIEVMKASLDFLVHQIE 385
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 148 bits (377), Expect = 2e-39
Identities = 110/493 (22%), Positives = 190/493 (38%), Gaps = 55/493 (11%)
Query: 60 RKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILD 119
IPGP + + GN Y + K +GK++ Y PV+ I D
Sbjct: 14 LGIPGPTPLPFLGNILSY--------HKGFCMFDMECHKKYGKVW-GFYDGQQPVLAITD 64
Query: 120 RDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPEL 179
D + VL S F R P P + + + E W LR+ L+P
Sbjct: 65 PDMIKTVLVKECYSVFTNRRPFG---------PVGFMKSAISIAEDEEWKRLRSLLSPTF 115
Query: 180 TSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGF 239
TSG+ + +P + + + +R E + ++ ++ + G +
Sbjct: 116 TSGK-LKEMVPIIAQYGDVLVRNLRRE-AETGKPVTLKDVFGAYSMDVITSTSFGVNIDS 173
Query: 240 LGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVD 299
L DP + +R F+ + F L P L + + + + + V
Sbjct: 174 LNNPQDPFVENTKKLLRFDFLDPFFLSITV-FPFLIPILEVLNICVFPREVTNFLRKSVK 232
Query: 300 EALAD-EEDTCSLDTDVQTVFMSILNAPDVDIRDKKG---------------AIIDFIAA 343
EDT D F+ ++ +D ++ K +II FI A
Sbjct: 233 RMKESRLEDTQKHRVD----FLQLM----IDSQNSKETESHKALSDLELVAQSII-FIFA 283
Query: 344 GIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFR 403
G +T + L F++Y +A + Q+K+ EEI V T + +YL + E+ R
Sbjct: 284 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 343
Query: 404 LLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETE 463
L P A ++ R+ + +E++G IP G V++ ++ D + + ++F PER+ + +
Sbjct: 344 LFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 403
Query: 464 KNK---FLVCPFGVGRRICPGKRFTELELKVCLASIVREFKVGFNG----TLNLEFEFLL 516
+ PFG G R C G RF + +K+ L +++ F L L LL
Sbjct: 404 NIDPYIYT--PFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLL 461
Query: 517 TPTSPTSFIFEPR 529
P P E R
Sbjct: 462 QPEKPVVLKVESR 474
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 139 bits (352), Expect = 1e-36
Identities = 75/410 (18%), Positives = 132/410 (32%), Gaps = 74/410 (18%)
Query: 93 YQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRP 152
+ ++F L FP+ I D + + L A +K + YR
Sbjct: 24 LLAWGRAHPRLFL--PLPRFPLALIFDPEGVEGALLAEGTTKATFQ--------YRALSR 73
Query: 153 DRYTNLGLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHS 212
T GL+ + GE W R L + + + + A F
Sbjct: 74 --LTGRGLLTDWGESWKEARKALKDPFL-PKNVRGYREAMEEEARAF-----FGEWRGEE 125
Query: 213 VLCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFW 272
E+ + L + GK L + + L + +
Sbjct: 126 RDLDHEM-LALSLRLLGRALFGKPLS--PSLAEHALKALDRIMAQ----------TRSPL 172
Query: 273 KLFPTPAYLKLIKSEDAIYDIISRYVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRD 332
L A + K A+Y + + + +
Sbjct: 173 ALLDLAAEARFRKDRGALYREA----EALIVHPPLSH----------LP-----RERALS 213
Query: 333 KKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAK 392
+ + + AG +T + L + L++ Q+++ E
Sbjct: 214 E---AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALA-------------- 256
Query: 393 YLKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEF 452
+E+ RL P A + R E PL L ++P G+ L+ + +FP + F
Sbjct: 257 ----AFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPY--VTQRLHFPDGEAF 310
Query: 453 RPERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFKV 502
RPER+L EE PFG+G+R+C G+ F LE + L + R F++
Sbjct: 311 RPERFL-EERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL 359
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 139 bits (353), Expect = 1e-36
Identities = 51/351 (14%), Positives = 100/351 (28%), Gaps = 57/351 (16%)
Query: 159 GLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDE 218
G+ GE + ++ L + + + + ++ +DE
Sbjct: 82 GVQGLDGETHRHRK-QMFMGLMTPERVRALAQLFEAEWRR---AVPGWT-RKGEIVFYDE 136
Query: 219 LANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTP 278
L + + C D A +R F A+ +P
Sbjct: 137 LHEPL-TRAVCAW-------AGVPLPDDEAGNRAGELRALFDAAGS-----------ASP 177
Query: 279 AYLKLIKSEDAIYDIISRYVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAII 338
+L + + R ++ A + S +I D +
Sbjct: 178 RHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGT-----AAYAIAWHRDRHDDLLSPHVA 232
Query: 339 D----FIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYL 394
+ + FV + + + + + +Q Y
Sbjct: 233 AVELVNVLRPTVAIAVYITFVAHALQTCSGIRAAL------------------VQQPDYA 274
Query: 395 KACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRP 454
+ ++E R P P + E G P G ++ + + D A + QEFRP
Sbjct: 275 ELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRP 334
Query: 455 ERWLGEETEKNKFLVCPFGVGR----RICPGKRFTELELKVCLASIVREFK 501
ER+ + + F+ P G G CPG+ +KV +V +
Sbjct: 335 ERFRAWDEDSFNFI--PQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 383
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 137 bits (347), Expect = 2e-35
Identities = 68/470 (14%), Positives = 142/470 (30%), Gaps = 54/470 (11%)
Query: 59 LRKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFG-KIFREEYLFNFPVINI 117
LR+IPG I +F +F Y E ++ + + +FR P +
Sbjct: 8 LREIPGSYGIPFFQPIKDRLEYF--YGTGGRDEYFRSRMQKYQSTVFR---ANMPPGPFV 62
Query: 118 LDRDDLFLVLGASARSKFPLRPPNE-----VTSYYRKSRPDRYTNLGLVNEQGEIWHLLR 172
+ ++L A + E +Y ++ + + E H
Sbjct: 63 SSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQL 122
Query: 173 TRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLI 232
L + NR +P+ + + +N D +
Sbjct: 123 KNLLFFMLKNS-SNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGE-QAAFRFLGRAY 180
Query: 233 LGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYD 292
+ + A + ++ + L PT ++ +
Sbjct: 181 FNS------NPEETKLGTSAPTLISSWV----------LFNLAPTLDLGLPWFLQEPLLH 224
Query: 293 IISRYVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFI-AAGIKTFGNT 351
+ Q+V ++ + K A+ + + A TFG
Sbjct: 225 TFRLPAFLIKSTYNKLYD---YFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGV 281
Query: 352 ---LVFVLYLIA-KNTTCQEKIYEEIINVAGPHQD--FTTKNIQNAKYLKACIEESFRLL 405
L I ++ EEI + D T + I+ K+ + ES R+
Sbjct: 282 KILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIE 341
Query: 406 PTAPQIARITETPLELSG----YQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEE 461
P P ++ + +++ G +L + A D F + +E+ P+R++G+
Sbjct: 342 PPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDG 401
Query: 462 TEKNKFLVCPFGVGR---------RICPGKRFTELELKVCLASIVREFKV 502
K++ + G + C GK F L ++ + + R +
Sbjct: 402 EALLKYV--WWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDS 449
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 134 bits (340), Expect = 1e-34
Identities = 43/289 (14%), Positives = 91/289 (31%), Gaps = 37/289 (12%)
Query: 267 FGLPFWKLFPTPAYLK--LIKSEDAIYDIISRYVDEALADEEDTCSLDTDVQTVFMSILN 324
LP K + + ++ ++ + E+ L ++ L
Sbjct: 193 KLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQS--WLG-----SYVKQLQ 245
Query: 325 APDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFT 384
+D ++ A++ + G +V+ + + + EEI G
Sbjct: 246 DEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEI---QGGKHLRL 302
Query: 385 TKNIQNAKYLKACIEESFRLLPTAPQIARITETPLELS-----GYQIPAGSVLLCHTWQA 439
+ +N + + E+ RL A I R ++ Y + G L + +
Sbjct: 303 EERQKNTPVFDSVLWETLRLTAAAL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFIS 361
Query: 440 -CLDEANFPQAQEFRPERWLGEETE----------KNKFLVCPFGVGRRICPGKRFTELE 488
+D Q + F+ +R+L + + K+ P+G +CPG+ F
Sbjct: 362 PQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHA 421
Query: 489 LKVCLASIVREFKVGFNGTLNLE--------FEFLLTPTSPTSFIFEPR 529
+K + +I+ F V +L P + R
Sbjct: 422 IKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIR 470
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 109 bits (274), Expect = 1e-25
Identities = 89/510 (17%), Positives = 164/510 (32%), Gaps = 102/510 (20%)
Query: 32 ILALLLSLVLCATFVKSLKQTGPYFDTLRKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHE 91
+LA LL L+ L LR + P + F L
Sbjct: 2 VLAGLLLLLTLLAGAHLLWGRWK----LRNLHLPPLV---PG-------FLHLLQPNLPI 47
Query: 92 SYQDLFKMFGKIFREEYLFNFP--VIN--------ILDRDDLFLVLGASARSKFPLRPPN 141
L + G ++R L V+N ++ + F + R + P
Sbjct: 48 HLLSLTQKLGPVYRL-RLGLQEVVVLNSKRTIEEAMIRKWVDF-----AGRPQIPSY--K 99
Query: 142 EVTSYYRKSRPDRYTNLGLV-NEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFN 200
V+ + + + +W + +LT ++ + R E V +
Sbjct: 100 LVSQRCQ----------DISLGDYSLLWKAHK-KLT--RSALLLGTRSSME-PWVDQLTQ 145
Query: 201 SLIRHHSCENHSVLCFDELANRMG--------LESA-----CTLILGKRLGFLGEDIDPI 247
+ + + G C L G + + +
Sbjct: 146 EFC-------------ERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNK----EDTLVHA 188
Query: 248 MTKLAVAVREQF-IASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVDEALADEE 306
+ + + S +PF + FP P +L ++ + ++ + +
Sbjct: 189 FHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKE--- 245
Query: 307 DTCSLDTDVQTVFMSIL---------NAPDVDIRDKK--GAIIDFIAAGIKTFGNTLVFV 355
S+ + + + +++D G +T +TL +
Sbjct: 246 ---SMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWA 302
Query: 356 LYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAK---YLKACIEESFRLLPTAP-QI 411
+ + + Q ++ EE+ GP + ++ L A I E RL P P +
Sbjct: 303 VAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLAL 362
Query: 412 ARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCP 471
T P + GY IP G V++ + A LDE + Q EFRP+R+L
Sbjct: 363 PHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFL---EPGANPSALA 419
Query: 472 FGVGRRICPGKRFTELELKVCLASIVREFK 501
FG G R+C G+ LEL V LA +++ F
Sbjct: 420 FGCGARVCLGESLARLELFVVLARLLQAFT 449
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 107 bits (269), Expect = 5e-25
Identities = 69/324 (21%), Positives = 112/324 (34%), Gaps = 36/324 (11%)
Query: 229 CTLILGKRLGFLGEDIDPIMTKLAVAVRE--QFIASRDTCFGLPFWKLFPTPAYLKLIKS 286
+ G+ F + M L E + +S + P + P PA +
Sbjct: 177 GAMCFGQH--F--PESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAF 232
Query: 287 EDAIYDIISRYVDEALADEEDTCSLDTDVQTVFMSIL--------NAPDVDIRDKK--GA 336
+ + V E D + L A I +K
Sbjct: 233 NQRFLWFLQKTVQEHYQ------DFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNL 286
Query: 337 IIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKA 396
+ D AG T + + L + Q KI +E+ V G + + YL+A
Sbjct: 287 VNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEA 346
Query: 397 CIEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPE 455
I E+FR P I T L+G+ IP + + WQ D + EFRPE
Sbjct: 347 FILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPE 406
Query: 456 RWLGEE------TEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVR--EFKVGFNGT 507
R+L + K + FG+G+R C G+ + E+ + LA +++ EF V
Sbjct: 407 RFLTADGTAINKPLSEKMM--LFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK 464
Query: 508 LNLEFEFLLTPTSPTSF--IFEPR 529
++L + LT + R
Sbjct: 465 VDLTPIYGLT-MKHARCEHVQARR 487
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 106 bits (266), Expect = 1e-24
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 337 IIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKA 396
I D A T L ++L L + Q ++ E+ V G + + N Y+ A
Sbjct: 284 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLA 343
Query: 397 CIEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPE 455
+ E+ R P I T + GY IP +V+ + W D +P + F P
Sbjct: 344 FLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPA 403
Query: 456 RWLGEETEKNKFL---VCPFGVGRRICPGKRFTELELKVCLASIVR--EFKVGFNGTLNL 510
R+L ++ NK L V F VG+R C G+ ++++L + ++ + +F+ N +
Sbjct: 404 RFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKM 463
Query: 511 EFEFLLTPTSPTSF--IFEPR 529
F + LT P SF R
Sbjct: 464 NFSYGLT-IKPKSFKVNVTLR 483
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 104 bits (263), Expect = 3e-24
Identities = 63/318 (19%), Positives = 123/318 (38%), Gaps = 25/318 (7%)
Query: 229 CTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGL----PFWKLFPTPAYLKLI 284
+I G+R F D + E + L P+ + P + +L
Sbjct: 166 NLIIFGER--F--TYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLF 221
Query: 285 KSEDAIYDIISRYVDEALADEEDTCSLD-TDVQTVFMSIL----NAPDVDIRDKK--GAI 337
++ +YD +SR +++A + + D ++ + N P + ++
Sbjct: 222 RNAAVVYDFLSRLIEKASVNRKPQLPQHFVDA---YLDEMDQGKNDPSSTFSKENLIFSV 278
Query: 338 IDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKAC 397
+ I AG +T N L + + +A Q ++ +EI + GP+ + + Y +A
Sbjct: 279 GELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAV 338
Query: 398 IEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+ E R P I T + GY IP G+ ++ + + DE + + F PER
Sbjct: 339 LHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPER 398
Query: 457 WLGEE-TEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVR--EFKVGFNGTLNLEFE 513
+L K + PF +GRR C G+ +E+ + ++++ +L+
Sbjct: 399 FLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPR 458
Query: 514 FLLTPTSPTSF--IFEPR 529
+T P + E R
Sbjct: 459 LGMT-LQPQPYLICAERR 475
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 102 bits (256), Expect = 2e-23
Identities = 57/300 (19%), Positives = 110/300 (36%), Gaps = 42/300 (14%)
Query: 229 CTLILGKRLGFLGEDIDPIMTKLAVAVRE--QFIASRDTCFGLPFWKLFPTPAYLKLIKS 286
+ + ++ DP + + ++ +P+ K+FP KL
Sbjct: 162 SLICFNTS--Y--KNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSH 217
Query: 287 EDAIYDIISRYVDE-------------------ALADEEDTCSLDTDVQTVFMSILNAPD 327
D++++ ++ A + ++ + + D
Sbjct: 218 VKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELL------SD 271
Query: 328 VDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKN 387
I I D AG++T + + + L + N ++K+YEEI G + T +
Sbjct: 272 NHIL---TTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISD 328
Query: 388 IQNAKYLKACIEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQACLDEANF 446
L+A I E RL P AP I + + + G+ ++ + W +E +
Sbjct: 329 RNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEW 388
Query: 447 PQAQEFRPERWLGEE-----TEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFK 501
Q +F PER+L + +L PFG G R C G+ EL + +A +++ F
Sbjct: 389 HQPDQFMPERFLNPAGTQLISPSVSYL--PFGAGPRSCIGEILARQELFLIMAWLLQRFD 446
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 102 bits (256), Expect = 2e-23
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 8/200 (4%)
Query: 337 IIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKA 396
+ D +AG+ T TL + L L+ + Q ++ +EI +V G + + + Y A
Sbjct: 277 VADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTA 336
Query: 397 CIEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPE 455
I E R P + +T +E+ G++IP G+ L+ + DEA + + F PE
Sbjct: 337 VIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPE 396
Query: 456 RWLGEE-TEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFKVGF---NGTLNLE 511
+L + PF GRR C G+ +EL + S+++ F +
Sbjct: 397 HFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHH 456
Query: 512 FEFLLTPTSPTSF--IFEPR 529
F SP+ + PR
Sbjct: 457 GVFAFL-VSPSPYELCAVPR 475
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 99 bits (250), Expect = 1e-22
Identities = 99/492 (20%), Positives = 167/492 (33%), Gaps = 119/492 (24%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINIL---- 118
PGP + GN + +L + +S+ L + FG +F Y+ + ++ ++
Sbjct: 13 PGPFPLPIIGNLFQL-------ELKNIPKSFTRLAQRFGPVFTL-YVGSQRMV-VMHGYK 63
Query: 119 -------DRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLL 171
D D F S R P + + G++ G W +
Sbjct: 64 AVKEALLDYKDEF-----SGRGDLPAF--------------HAHRDRGIIFNNGPTWKDI 104
Query: 172 RTRLTPELTSGRI--MNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMG----- 224
R R + LT+ R M + E +R+ + + L+ + L G
Sbjct: 105 R-RFS--LTTLRNYGMGKQGNE-SRIQREAHFLL-------------EALRKTQGQPFDP 147
Query: 225 ---LESA-----CTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGL-----PF 271
+ A ++ K F D +L E F L F
Sbjct: 148 TFLIGCAPCNVIADILFRKH--FDYND--EKFLRLMYLFNENFHLLSTPWLQLYNNFPSF 203
Query: 272 WKLFPTPAYLKLIKSEDAIYDIISRYVDEALAD--------------------EEDTCSL 311
P + K+IK+ + + +S V E + L
Sbjct: 204 LHYLPGS-HRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERL 262
Query: 312 DTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYE 371
T + D AG +T TL + L ++ K +EK++E
Sbjct: 263 YTMDGITVT----------------VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHE 306
Query: 372 EIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQ-IARITETPLELSGYQIPAGS 430
EI V GP + K+ Q Y+ A + E R + P + GY IP G+
Sbjct: 307 EIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGT 366
Query: 431 VLLCHTWQACLDEANFPQAQEFRPERWLGEE-TEKNKFLVCPFGVGRRICPGKRFTELEL 489
V++ D FP ++F+PE +L E K PF G+R+C G+ +EL
Sbjct: 367 VVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMEL 426
Query: 490 KVCLASIVREFK 501
+ L +I++ F
Sbjct: 427 FLLLCAILQHFN 438
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 98.8 bits (247), Expect = 3e-22
Identities = 102/484 (21%), Positives = 160/484 (33%), Gaps = 102/484 (21%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDD 122
PGP + GN L S+ L + +G +F YL + PV+ +L D
Sbjct: 13 PGPSPLPVLGNLLQM-------DRKGLLRSFLRLREKYGDVFTV-YLGSRPVV-VLCGTD 63
Query: 123 LF---LVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPEL 179
LV A A F R V + G++ GE W LR R + L
Sbjct: 64 AIREALVDQAEA---FSGRGKIAVVDPIFQ-------GYGVIFANGERWRALR-RFS--L 110
Query: 180 TSGRI--MNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMG--------LESA- 228
+ R M + E R+ E+ L+ +EL G S
Sbjct: 111 ATMRDFGMGKRSVE-ERIQEEARCLV-------------EELRKSKGALLDNTLLFHSIT 156
Query: 229 ----CTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGL-----PFWKLFPTPA 279
C+++ GKR F + DP+ +L + F + F K FP
Sbjct: 157 SNIICSIVFGKR--F--DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGT- 211
Query: 280 YLKLIKSEDAIYDIISRYVDEALAD--------------------EEDTCSLDTDVQTVF 319
+ ++ ++ I I + V++ A + D S +
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLIL 271
Query: 320 MSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGP 379
++ AG +T TL + L+ K E++ +EI V G
Sbjct: 272 T----------------VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGS 315
Query: 380 HQDFTTKNIQNAKYLKACIEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQ 438
H+ + Y A I E RL P + + GY IP + +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 439 ACLDEANFPQAQEFRPERWLGEE-TEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIV 497
A D F F P +L K PF +G+RIC G+ EL + +I+
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTIL 435
Query: 498 REFK 501
+ F
Sbjct: 436 QNFS 439
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 98.4 bits (246), Expect = 4e-22
Identities = 99/484 (20%), Positives = 161/484 (33%), Gaps = 102/484 (21%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDD 122
PGP + GN + + +S +L K++G +F Y P++ +L +
Sbjct: 14 PGPTPLPVIGNILQI-------GIKDISKSLTNLSKVYGPVFTL-YFGLKPIV-VLHGYE 64
Query: 123 LF---LVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPEL 179
L+ F R + + G+V G+ W +R R + L
Sbjct: 65 AVKEALIDLGEE---FSGRGIFPLAERANR-------GFGIVFSNGKKWKEIR-RFS--L 111
Query: 180 TSGRI--MNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMG--------LESA- 228
+ R M + E +RV E+ L+ +EL L A
Sbjct: 112 MTLRNFGMGKRSIE-DRVQEEARCLV-------------EELRKTKASPCDPTFILGCAP 157
Query: 229 ----CTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGL-----PFWKLFPTPA 279
C++I KR F +D L + E + P FP
Sbjct: 158 CNVICSIIFHKR--FDYKD--QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGT- 212
Query: 280 YLKLIKSEDAIYDIISRYVDEALAD--------------------EEDTCSLDTDVQTVF 319
+ KL+K+ + I V E + + S T
Sbjct: 213 HNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLEN 272
Query: 320 MSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGP 379
+D AG +T TL + L L+ K+ K+ EEI V G
Sbjct: 273 T----------------AVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGR 316
Query: 380 HQDFTTKNIQNAKYLKACIEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQ 438
++ ++ + Y A + E R + P + ++ Y IP G+ +L
Sbjct: 317 NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTS 376
Query: 439 ACLDEANFPQAQEFRPERWLGEETEKNKF-LVCPFGVGRRICPGKRFTELELKVCLASIV 497
D FP + F P +L E K PF G+RIC G+ +EL + L SI+
Sbjct: 377 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSIL 436
Query: 498 REFK 501
+ F
Sbjct: 437 QNFN 440
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 96.9 bits (242), Expect = 1e-21
Identities = 89/484 (18%), Positives = 164/484 (33%), Gaps = 102/484 (21%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDD 122
PGP + + GN +++ S + + +G +F +L V+ +L D
Sbjct: 13 PGPTPLPFIGNYLQL-------NTEQMYNSLMKISERYGPVFTI-HLGPRRVV-VLCGHD 63
Query: 123 LF---LVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPEL 179
LV A F R + K G+V GE LR R + +
Sbjct: 64 AVREALVDQAEE---FSGRGEQATFDWVFK-------GYGVVFSNGERAKQLR-RFS--I 110
Query: 180 TSGRI--MNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMG--------LESA- 228
+ R + + E R+ E+ LI D L G L
Sbjct: 111 ATLRDFGVGKRGIE-ERIQEEAGFLI-------------DALRGTGGANIDPTFFLSRTV 156
Query: 229 ----CTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGL-----PFWKLFPTPA 279
+++ G R F + D L + F + + L K P P
Sbjct: 157 SNVISSIVFGDR--F--DYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGP- 211
Query: 280 YLKLIKSEDAIYDIISRYVDEALAD--------------------EEDTCSLDTDVQTVF 319
+ + + D I++ V+ E++ + V
Sbjct: 212 QQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVM 271
Query: 320 MSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGP 379
++ G +T TL + L+ K+ + K++EEI V G
Sbjct: 272 T----------------TLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK 315
Query: 380 HQDFTTKNIQNAKYLKACIEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQ 438
++ ++ Y++A I E R P +AR + + + +P G+ +
Sbjct: 316 NRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGS 375
Query: 439 ACLDEANFPQAQEFRPERWLGEETEKNKF-LVCPFGVGRRICPGKRFTELELKVCLASIV 497
D + F Q+F P+ +L E+ + K PF +G+R C G+ +EL + +++
Sbjct: 376 VLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVM 435
Query: 498 REFK 501
+ F+
Sbjct: 436 QNFR 439
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 56.6 bits (137), Expect = 9e-09
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 8/108 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
I E+ R P I R + G +I +++ C A D F Q F R
Sbjct: 306 IAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR- 364
Query: 458 LGEETEKNKFLVCP-----FGVGRRICPGKRFTELELKVCLASIVREF 500
E+ FG G C G F + E+++ ++ +
Sbjct: 365 --EDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKM 410
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 54.9 bits (131), Expect = 5e-08
Identities = 52/422 (12%), Positives = 125/422 (29%), Gaps = 117/422 (27%)
Query: 84 YKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEV 143
++ + Y+D+ +F + ++ NF ++ D +L + + + V
Sbjct: 9 FETGEHQYQYKDIL----SVFEDAFVDNFDCKDVQ--DMPKSIL-SKEEIDHIIMSKDAV 61
Query: 144 TSYYR---------KSRPDRYTNLGLVNEQGEIWHLLRTR-LTPELTSGRIMNRFLPELN 193
+ R + ++ L + ++T P + + ++ + +
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM----MTRMYIEQRD 117
Query: 194 RVAEDFNSLIRHHSCENHSVLCFDELANR-MGLESACTLIL------GKRLGFLGEDIDP 246
R+ D +++ L +L + L A +++ GK
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYL---KLRQALLELRPAKNVLIDGVLGSGK----------- 163
Query: 247 IMTKLAVAVREQFIASRDTCFGLPFW---KLFPTPAYLKLIKSEDAIYDIISRY---VDE 300
T +A+ V + F + FW K +P + L + +Y I + D
Sbjct: 164 --TWVALDVCLSYKVQCKMDFKI-FWLNLKNCNSPETV-LEMLQKLLYQIDPNWTSRSDH 219
Query: 301 ALADEEDTCSLDTDVQTVFMS--------ILNAPDVDIRDKKGAIIDFIAAGIKTFGN-- 350
+ + S+ +++ + S +L ++++ K F
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVL---L-NVQNAK---------AWNAFNLSC 266
Query: 351 -TLVFVLYLIAKNTTCQEKIYEEIINVAGPH-------QDFTTKNIQNAKYLKACIEESF 402
L+ TT +++ + + H T + L ++
Sbjct: 267 KILL---------TTRFKQVTDFLSAATTTHISLDHHSMTLTPD--EVKSLLLKYLDCRP 315
Query: 403 RLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEET 462
+ LP ++ P LS I + D + W
Sbjct: 316 QDLP--REVLTT--NPRRLS--IIAE----------SIRDGLA-------TWDNWKHVNC 352
Query: 463 EK 464
+K
Sbjct: 353 DK 354
Score = 54.5 bits (130), Expect = 7e-08
Identities = 71/353 (20%), Positives = 106/353 (30%), Gaps = 91/353 (25%)
Query: 5 KQVT--LGAATSLLIAKFYLSIPDTSTIFILALLLSLVLCATFVKSLKQTGPYFDTLR-- 60
KQVT L AAT ++S+ S + SL +K L L
Sbjct: 275 KQVTDFLSAAT-----TTHISLDHHSMTLTPDEVKSL-----LLKYLDCR---PQDLPRE 321
Query: 61 --KIPGPRSIYYFG-------NRWMYYSWFGPYKLNKLHES---------YQDLFKMFGK 102
PR + W + KL + ES Y+ +F
Sbjct: 322 VLTT-NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS- 379
Query: 103 IFREEYLFNFP--VINIL----DRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYT 156
+F + P +++++ + D+ +V+ + + P E T P Y
Sbjct: 380 VFPPS--AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI----PSIYL 433
Query: 157 NLGLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPE-LNRVAED--FNSLIRHHSCENHSV 213
L + E H + + I F + L D F S I HH
Sbjct: 434 ELKVKLENEYALH---RSI---VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH------- 480
Query: 214 LCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWK 273
L E RM L L FL + I A + +T L F
Sbjct: 481 LKNIEHPERMTLFRMVFL----DFRFLEQKI--RHDSTAWNASGSIL---NTLQQLKF-- 529
Query: 274 LFPTPAYLKLIKSEDAIYDIISRYVDEAL-----ADEEDTCSLDTD-VQTVFM 320
Y I D Y+ R V+ L +E CS TD ++ M
Sbjct: 530 ------YKPYICDNDPKYE---RLVNAILDFLPKIEENLICSKYTDLLRIALM 573
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 52.2 bits (126), Expect = 2e-07
Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 6/107 (5%)
Query: 394 LKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFR 453
A I E R+ P R +E+ G I AGS + A D F F
Sbjct: 266 RAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 325
Query: 454 PERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R ++ L FG+G C G+ + E A + +
Sbjct: 326 HTR----PPAASRNL--SFGLGPHSCAGQIISRAEATTVFAVLAERY 366
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 50.4 bits (121), Expect = 8e-07
Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE FR AR + +E G + G ++L T LD+ + R
Sbjct: 293 VEELFRRFAVV-SDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR- 350
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
F G C G LE+ V L +
Sbjct: 351 -----RDVTHST--FAQGPHRCAGMHLARLEVTVMLQEWLARI 386
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 50.4 bits (121), Expect = 8e-07
Identities = 13/103 (12%), Positives = 24/103 (23%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+ E RL P R + L + I G ++ A D F + +R
Sbjct: 259 VAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDR- 317
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ + L + +
Sbjct: 318 -----PDADRAL--SAHRGHPGRLEELVTALATAALRAAAKAL 353
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 50.0 bits (120), Expect = 1e-06
Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
IEE+ R P ++R L + + +P G +L A D F P+R
Sbjct: 293 IEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR- 351
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ + L FG G C G LE V L ++ F
Sbjct: 352 -----AQIRHL--GFGKGAHFCLGAPLARLEATVALPALAARF 387
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 49.9 bits (120), Expect = 1e-06
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
EE+ R R T +EL+G I G +L A D + + R
Sbjct: 288 FEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR- 346
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ + + FG G +C G+ LE +V LA++ R+
Sbjct: 347 -----KTSGHV--GFGSGVHMCVGQLVARLEGEVVLAALARKV 382
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 50.0 bits (120), Expect = 1e-06
Identities = 25/103 (24%), Positives = 36/103 (34%), Gaps = 9/103 (8%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
EE FR P AR+ E G + G ++L T LD+A P+ + R
Sbjct: 292 AEEMFRRFP-VVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR- 349
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
FG G C G +E+ V L ++
Sbjct: 350 -----RSISHST--FGGGPHRCAGMHLARMEVIVTLEEWLKRI 385
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 50.0 bits (120), Expect = 1e-06
Identities = 29/103 (28%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE R P PQ+ R T E++G IPA ++ A D F P R
Sbjct: 278 VEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR- 336
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ FG G C G LE +V L I+ F
Sbjct: 337 -----KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 49.5 bits (119), Expect = 1e-06
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 7/103 (6%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+E R PT ++R ++ G I G ++ + LD A+F +E R +R
Sbjct: 271 ADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR- 328
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ GVG C G +E+ V L +
Sbjct: 329 ---GLAPIRHTT--MGVGAHRCVGAGLARMEVIVFLREWLGGM 366
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 49.6 bits (119), Expect = 2e-06
Identities = 23/103 (22%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
EE R RI + E G Q+ G +L + LDE R
Sbjct: 286 CEELLRRFS-LVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR- 343
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+K FG G +C G+ E+ V L +
Sbjct: 344 -----QKVSHTT--FGHGSHLCLGQHLARREIIVTLKEWLTRI 379
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 48.8 bits (117), Expect = 2e-06
Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 8/107 (7%)
Query: 394 LKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFR 453
+ +EE R AR+ +++ G I G + A D + F F
Sbjct: 267 IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD 326
Query: 454 PERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R N L FG G +C G LE ++ + ++++
Sbjct: 327 ITR------SPNPHL--SFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 48.8 bits (117), Expect = 3e-06
Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE R + I R+ + +E+ G I AG +L D + F R
Sbjct: 280 VEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR- 338
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ FG G C G+ EL++ L +
Sbjct: 339 -----NARHHVG--FGHGIHQCLGQNLARAELEIALGGLFARI 374
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 48.4 bits (116), Expect = 3e-06
Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
++E R A + R+ + + + G + A D + F ER
Sbjct: 269 VDELLRFYGPA-MVGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER- 326
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N+ L G G C G +E +V + ++
Sbjct: 327 -----TPNRHL--SLGHGIHRCLGAHLIRVEARVAITEFLKRI 362
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 48.0 bits (115), Expect = 4e-06
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE+ R P + R+T+ +++ I G ++ A DE F F P+R
Sbjct: 244 VEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR- 302
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N L FG G +C G LE ++ L ++F
Sbjct: 303 -----TPNPHL--SFGSGIHLCLGAPLARLEARIALEEFAKKF 338
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 47.6 bits (114), Expect = 5e-06
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 10/104 (9%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE+ R P R ++ +I G ++ + A DE F + F+ R
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ L FG+G +C G LE + L I+ F
Sbjct: 282 -------REMHLA--FGIGIHMCLGAPLARLEASIALNDILNHF 316
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 47.6 bits (114), Expect = 5e-06
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 8/107 (7%)
Query: 394 LKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFR 453
A +EE R P + R + L + IP GS ++ A D A FP
Sbjct: 287 TPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLD 346
Query: 454 PERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R + + FG+G C G E ++ L +++
Sbjct: 347 VHR------AAERQV--GFGLGIHYCLGATLARAEAEIGLRALLDGI 385
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 47.7 bits (114), Expect = 6e-06
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE R A + R+T + ++G +P+G+ ++ A D A F F P R
Sbjct: 291 VEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR- 349
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ N+ + FG G C G +EL V L +
Sbjct: 350 -----KPNRHIT--FGHGMHHCLGSALARIELSVVLRVLAERV 385
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 47.6 bits (114), Expect = 6e-06
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Query: 398 IEESFRLLPTAPQIA--RITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPE 455
+EE R +P A R + L G I AG +L T A D+A FP A +
Sbjct: 291 VEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVD 350
Query: 456 RWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R N+ L FG G C G +EL+V L +++
Sbjct: 351 R------TPNQHLG--FGHGVHHCLGAPLARVELQVALEVLLQRL 387
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 47.2 bits (113), Expect = 7e-06
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
IEE+ R P + R T+ ++L I G + A DE F ++F P+R
Sbjct: 244 IEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDR- 302
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N L FG G +C G LE ++ + + F
Sbjct: 303 -----NPNPHL--SFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 47.3 bits (113), Expect = 7e-06
Identities = 27/104 (25%), Positives = 36/104 (34%), Gaps = 9/104 (8%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
++E R L RI L L+G +I G ++C A D A P R
Sbjct: 273 VDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR 332
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
E + FG G C G LEL+ + R F
Sbjct: 333 ------EPIPHVA--FGHGVHHCLGAALARLELRTVFTELWRRF 368
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 46.9 bits (112), Expect = 1e-05
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANF-PQAQEFRPER 456
+EE RL +AR T + + IPAG +L A DE + P A E R
Sbjct: 287 VEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTR 346
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
L F G C G ++ +V L ++
Sbjct: 347 ------CPRNIL--TFSHGAHHCLGAAAARMQCRVALTELLARC 382
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 46.9 bits (112), Expect = 1e-05
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 8/104 (7%)
Query: 398 IEESFR-LLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE R L A + R+ +++ + G ++L A D +FP +R
Sbjct: 270 VEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR 329
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
L FG G+ CPG ++ + +++++
Sbjct: 330 -----PNPTSHLA--FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 46.5 bits (111), Expect = 1e-05
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 7/107 (6%)
Query: 394 LKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFR 453
++ + E R + R EL G I G ++ + D+ + +EF
Sbjct: 298 VETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFI 357
Query: 454 PERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+R + L FG G C G R E++L++ I+ F
Sbjct: 358 IDR-----PRPRQHL--SFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 46.1 bits (110), Expect = 2e-05
Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 10/105 (9%)
Query: 398 IEESFRLLPTAPQIA--RITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPE 455
++E R + + RI +E+ G +I AG + A D FP +
Sbjct: 281 LDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLD 340
Query: 456 RWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R + N L +G G C G ++ ++ + +++
Sbjct: 341 R------DPNPHLA--YGNGHHFCTGAVLARMQTELLVDTLLERL 377
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 46.0 bits (110), Expect = 2e-05
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE R P+ R + +EL G ++ V++ A D + + +F ER
Sbjct: 270 VEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER- 328
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVR 498
+ + FG G R C G +L+ +A++ R
Sbjct: 329 -----DPVPSM--SFGAGMRYCLGSYLARTQLRAAVAALAR 362
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 46.1 bits (110), Expect = 2e-05
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE R + R +E+ G IP S +L A D FP F R
Sbjct: 278 VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR- 336
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ L FG G C G+ +LE +V L ++ F
Sbjct: 337 -----DTRGHLS--FGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 45.7 bits (109), Expect = 2e-05
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 7/104 (6%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE R +A I R + + + + A ++ A DE F EF R
Sbjct: 277 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 336
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ L FG G C + + EL +++ ++F
Sbjct: 337 ----KWPPQDPLG--FGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 45.3 bits (108), Expect = 3e-05
Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 9/104 (8%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+ E R L P R+ + + G I AG +LC A DEA P R
Sbjct: 282 VNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR 341
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ FG G C G L++ ++ R F
Sbjct: 342 ------AAVSDVG--FGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 45.3 bits (108), Expect = 3e-05
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
IEE R + R+ E G + AG ++ A DEA F + ++F +R
Sbjct: 267 IEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR- 325
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N L FG G C G + LEL + ++R
Sbjct: 326 -----NPNSHLA--FGFGTHFCLGNQLARLELSLMTERVLRRL 361
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 45.4 bits (108), Expect = 3e-05
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE+ R R T EL G +I AG L+ + A D A FP+ ++F P R
Sbjct: 326 VEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR- 384
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N+ L FG G C G LE++V L ++
Sbjct: 385 -----PANRHLA--FGAGSHQCLGLHLARLEMRVLLDVLLDRV 420
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 45.4 bits (108), Expect = 3e-05
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 8/103 (7%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
++E+ R R E+ G I G ++ A DE F EF R
Sbjct: 304 VDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR- 362
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N+ L FG G +C G+ +LE+K+ ++ +
Sbjct: 363 -----FPNRHLG--FGWGAHMCLGQHLAKLEMKIFFEELLPKL 398
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 45.3 bits (108), Expect = 4e-05
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE R L R+ +EL G +I G ++ H A D A + + F R
Sbjct: 274 VEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR 333
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
L FG G C G++ +EL++ ++ R
Sbjct: 334 ------RPAPHLA--FGFGAHQCIGQQLARIELQIVFETLFRRL 369
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 44.9 bits (107), Expect = 4e-05
Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 9/104 (8%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE R L R+ +E+ G I AG ++ A D + R
Sbjct: 281 VEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR 340
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
L FG G C G+ LEL+V L +++
Sbjct: 341 ------SARHHLA--FGFGVHQCLGQNLARLELEVILNALMDRV 376
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 44.9 bits (107), Expect = 4e-05
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 398 IEESFRLLPTAPQIA--RITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPE 455
I+E R +P + RI +E+ G +I AG + A D FP E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 456 RWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R N + FG G CPG LE ++ + +++
Sbjct: 338 R------SPNPHVS--FGFGPHYCPGGMLARLESELLVDAVLDRV 374
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 44.9 bits (107), Expect = 5e-05
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
++E R+L R+ +ELSG +PA ++ A D F + R
Sbjct: 286 VDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHR 345
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N + FG G C G+ LEL+V L +++R
Sbjct: 346 ------TDNHHVA--FGYGVHQCVGQHLARLELEVALETLLRRV 381
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 45.4 bits (107), Expect = 5e-05
Identities = 70/409 (17%), Positives = 123/409 (30%), Gaps = 147/409 (35%)
Query: 51 Q--TGPYFDTLRKIPGPRSIYYFGNRWMYYSWFGPY------KLNKLHESYQDLFKMFGK 102
Q T YF+ LR +Y Y+ G L++L + D K+F +
Sbjct: 163 QGNTDDYFEELRD------LYQ-----TYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQ 211
Query: 103 IFR-------------EEYL----FNFPVINI--------------LDRDDLFLVL-GAS 130
++YL + P+I + +L L GA+
Sbjct: 212 GLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGAT 271
Query: 131 ARSK-----FPLRPPNEVTSYYRKSR-----------------PDRYTNLGLV-----NE 163
S+ + + S++ R P+ ++ N
Sbjct: 272 GHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENN 331
Query: 164 QGEIWHLLRTR-LTPELTSGRI--MNRFLPELNRVAEDFNSLI---RHHSCENHSVLCFD 217
+G +L LT E + N LP +V SL+ ++ V+
Sbjct: 332 EGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEI---SLVNGAKNL------VVS-- 380
Query: 218 ELANRMGL-ESACTLILGKRLGFLGEDID----PIMTKLAVAVREQF--IASRDTCFGLP 270
G +S L L R +D P ++ + +F +AS P
Sbjct: 381 ------GPPQSLYGLNLTLRKAKAPSGLDQSRIP-FSERKLKFSNRFLPVAS-------P 426
Query: 271 FWKLFPTPAYLK----LIKSEDAIYDIISRYVDEALA-------DEEDTCSLDTDV-QTV 318
F + L LI +D + + +S + + + D D L + + +
Sbjct: 427 ----FHSH-LLVPASDLIN-KDLVKNNVS-FNAKDIQIPVYDTFDGSDLRVLSGSISERI 479
Query: 319 FMSILNAPDVD--IRDKKGA--IIDFIAAGIKTFGNTLVFVLYLIAKNT 363
I+ P V + A I+DF G G L +N
Sbjct: 480 VDCIIRLP-VKWETTTQFKATHILDFGPGGASGLGV-------LTHRNK 520
Score = 42.3 bits (99), Expect = 4e-04
Identities = 55/359 (15%), Positives = 109/359 (30%), Gaps = 129/359 (35%)
Query: 173 TR-LTPELTSGRIMNRFL-PE-----LNRVAEDFNSLIRHHSCENHSVLCFDELANRMGL 225
TR LT L+ G + + L P +++ E FN ++ + + A
Sbjct: 6 TRPLT--LSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPT---------EGFAADDEP 54
Query: 226 ESACTLILGKRLGFLGEDIDPIMTK-----LAVAVRE---QFIASRD------------- 264
+ L +GK LG++ ++P L + + E ++ D
Sbjct: 55 TTPAEL-VGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQEND 113
Query: 265 -----------------TCFGLPFWKLFPTPAYLKLIKSEDA-IYDI------ISRYVDE 300
PF K A + + +A + I Y +E
Sbjct: 114 TTLVKTKELIKNYITARIMAKRPFDKK-SNSALFRAVGEGNAQLVAIFGGQGNTDDYFEE 172
Query: 301 ALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIA 360
L D+ + ++ G +I F A L +
Sbjct: 173 -LR----------DLYQTYHVLV-----------GDLIKFSAE-----------TLSELI 199
Query: 361 KNTTCQEKIYEEIINVAG--------PHQDFTTKN---------IQNAKYLKACIEESFR 403
+ T EK++ + +N+ P +D+ IQ A Y+ +
Sbjct: 200 RTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTA-----K 254
Query: 404 LLPTAP-QIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQE--FRPERWLG 459
LL P ++ + S + A ++ +W++ + +A F ++G
Sbjct: 255 LLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFV--SVRKAITVLF----FIG 307
Score = 37.7 bits (87), Expect = 0.010
Identities = 50/302 (16%), Positives = 93/302 (30%), Gaps = 108/302 (35%)
Query: 99 MFGKIFREEYLFNFPVI-NILDRDDLFL--VLGASARSKFPLRPPNEVTSYY-----RKS 150
M G + Y ++ +R D G S + P +T ++ ++
Sbjct: 1631 M-GM---DLYK-TSKAAQDVWNRADNHFKDTYGFSI-LDIVINNPVNLTIHFGGEKGKRI 1684
Query: 151 RPDRYTNL-------------GLVNEQGE-----IWH-----LLRTRLT-P-----ELTS 181
R + Y+ + + E E + L T+ T P E +
Sbjct: 1685 R-ENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAA 1743
Query: 182 GRIM-NRFL-PELNRVAEDFNSLIRHHSCENHSV-----LCFDELANRMGLESACTLILG 234
+ ++ L P A HS+ L LA+ M +ES + +
Sbjct: 1744 FEDLKSKGLIPADATFA-------------GHSLGEYAALA--SLADVMSIESLVEV-VF 1787
Query: 235 KRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDII 294
R G + P R++ S + P + S++A+ ++
Sbjct: 1788 YR-GMTMQVAVP---------RDELGRSNYGMIAI-------NPGRVAASFSQEALQYVV 1830
Query: 295 SRYVDEALADEEDTCSLDTDVQTV-FMSILNAPD---V---DIR--DKKGAIIDFIAA-G 344
R + T L V+ V + N + V D+R D +++FI
Sbjct: 1831 ERV-------GKRTGWL---VEIVNY----NVENQQYVAAGDLRALDTVTNVLNFIKLQK 1876
Query: 345 IK 346
I
Sbjct: 1877 ID 1878
Score = 33.5 bits (76), Expect = 0.23
Identities = 40/250 (16%), Positives = 68/250 (27%), Gaps = 103/250 (41%)
Query: 81 FGPYKLNKLHESYQDL-FKMFG-------KIFRE------EYLFNFPVINILDRDDLF-- 124
FG K ++ E+Y + F+ KIF+E Y F + L
Sbjct: 1676 FGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSE------KGLLSAT 1729
Query: 125 ------LVLGASA-----RSKFPLRPPNEVT---SYYRKSRPDRYTNLG----LVNEQG- 165
L L A +SK L P + S LG L +
Sbjct: 1730 QFTQPALTLMEKAAFEDLKSKG-LIPADATFAGHS------------LGEYAALASLADV 1776
Query: 166 ----EIWHLLRTRLTPELTSGRIMNRFLPE------------LN--RVA-----EDFNSL 202
+ ++ R G M +P +N RVA E +
Sbjct: 1777 MSIESLVEVVFYR-------GMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYV 1829
Query: 203 IRHHSCENHSVLCFDELAN-------------RMGLESACTLILGKRLGFLGEDIDPIMT 249
+ ++ E+ N L++ ++ + DI +
Sbjct: 1830 VERVGKRTGWLV---EIVNYNVENQQYVAAGDLRALDTVTNVL--NFIKLQKIDIIELQK 1884
Query: 250 KLAV-AVREQ 258
L++ V
Sbjct: 1885 SLSLEEVEGH 1894
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 44.6 bits (106), Expect = 5e-05
Identities = 26/105 (24%), Positives = 34/105 (32%), Gaps = 10/105 (9%)
Query: 398 IEESFRLLPTAPQIA--RITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPE 455
+EE R + R +E G I AG ++L DE F +EF
Sbjct: 278 VEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAA 337
Query: 456 RWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R N L FG G C G LEL+ +
Sbjct: 338 R------TPNPHLT--FGHGIWHCIGAPLARLELRTMFTKLFTRL 374
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 44.6 bits (106), Expect = 5e-05
Identities = 24/106 (22%), Positives = 35/106 (33%), Gaps = 13/106 (12%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE R + R +EL G ++ AG + A DE+ F F R
Sbjct: 312 VEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR- 370
Query: 458 LGEETEKNK---FLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N F G G C G E++V + R+
Sbjct: 371 -----NPNPHLGF----GGGGAHFCLGANLARREIRVAFDELRRQM 407
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 44.5 bits (106), Expect = 6e-05
Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE R +R+ +E+ G I AG ++ A D A F ER
Sbjct: 282 VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER 341
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
L FG G C G+ +EL++ ++ R
Sbjct: 342 ------GARHHLA--FGFGPHQCLGQNLARMELQIVFDTLFRRI 377
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 43.8 bits (104), Expect = 9e-05
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 394 LKACIEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEF 452
++ ++E R R LE G I G ++ A D F + F
Sbjct: 287 MRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF 346
Query: 453 RPERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R + + L +G G +CPG LE ++ + +I R F
Sbjct: 347 DVRR------DTSASL--AYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 43.8 bits (104), Expect = 1e-04
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE R P R P++L G IPAG +L A FP F R
Sbjct: 300 VEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR 359
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ L FG G C G LE ++ + +++
Sbjct: 360 ------DTAGHLA--FGHGIHFCIGAPLARLEARIAVRALLERC 395
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 43.8 bits (104), Expect = 1e-04
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 9/104 (8%)
Query: 398 IEESFRLLPTAPQ-IARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE R Q R T + SG IPAG +++ A D P+ R
Sbjct: 273 VEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR 332
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ + + FG G C G + LE +V + + +
Sbjct: 333 ------DASGGVF--FGHGIHFCLGAQLARLEGRVAIGRLFADR 368
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 41.1 bits (97), Expect = 7e-04
Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 8/104 (7%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
+EE R R+ E++G +IP G+ + A D F A F
Sbjct: 290 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITV 349
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
+ + FG G C G LEL +A++
Sbjct: 350 -----KREAPSIA--FGGGPHFCLGTALARLELTEAVAALATRL 386
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 41.1 bits (97), Expect = 7e-04
Identities = 22/106 (20%), Positives = 30/106 (28%), Gaps = 13/106 (12%)
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+E R R ELSG QI G ++ A DE F F R
Sbjct: 303 ADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR- 361
Query: 458 LGEETEKNK---FLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
N F G G C G + + + ++
Sbjct: 362 -----NPNPHVGF----GGTGAHYCIGANLARMTINLIFNAVADHM 398
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 40.7 bits (96), Expect = 8e-04
Identities = 23/105 (21%), Positives = 33/105 (31%), Gaps = 10/105 (9%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQ-IPAGSVLLCHTWQACLDEANFPQAQEFRPE 455
+EE+ R R T + L + I G +L A A F
Sbjct: 279 VEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDAT 338
Query: 456 RWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R + L FG G C G +E+ + L S+ F
Sbjct: 339 R------TVKEHLA--FGHGVHFCLGAPLARMEVTLALESLFGRF 375
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 40.3 bits (95), Expect = 0.001
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANF-PQAQEFRPE 455
+EE+ R PT+ + R + + IPAG L+ DE P A F
Sbjct: 279 VEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLT 338
Query: 456 RWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
R T N+ + FG G +CPG + +E V L ++ F
Sbjct: 339 R-----TSGNRHIS--FGHGPHVCPGAALSRMEAGVALPALYARF 376
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 38.7 bits (91), Expect = 0.004
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 14/104 (13%)
Query: 398 IEESFRLL-PTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPER 456
EE R R+ + ++G I AG VL C + N F R
Sbjct: 263 TEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTC-----SMLATNRAPGDRFDITR 317
Query: 457 WLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREF 500
EK + FG G C G L+L+V L ++V F
Sbjct: 318 ------EKATHMA--FGHGIHHCIGAPLARLQLRVALPAVVGRF 353
>2qlz_A Transcription factor PF0095; 2.50A {Pyrococcus furiosus} PDB:
2quf_A
Length = 232
Score = 29.8 bits (66), Expect = 2.1
Identities = 15/125 (12%), Positives = 37/125 (29%), Gaps = 1/125 (0%)
Query: 105 REEYLFNFPVINILD-RDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNE 163
++ Y + + ++F G ++ + + +
Sbjct: 69 KKYYKISIAKSYVFTLTPEMFWYKGLDLGDAELRDFEISLSGLDTEPSTLKEMITDFIKA 128
Query: 164 QGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRM 223
E+ +L T E +M + + D L H + +EL++R+
Sbjct: 129 NKELEKVLEAFKTIESYRSSLMRKIKEAYLKEIGDMTQLAILHYLLLNGRATVEELSDRL 188
Query: 224 GLESA 228
L+
Sbjct: 189 NLKER 193
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel,
hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1
b.18.1.5 b.30.5.1 c.1.8.3
Length = 1024
Score = 28.7 bits (64), Expect = 5.7
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 94 QDLFKMFGKIFREEYLFNFPVINILD 119
QD + + G IFR+ L P I D
Sbjct: 201 QDQWWLPG-IFRDVTLQARPAGGITD 225
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel),
jelly-roll barrel, immunoglobulin, beta supersandwich,
hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP:
b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A
1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A*
1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A*
3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Length = 1023
Score = 28.6 bits (64), Expect = 6.9
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 94 QDLFKMFGKIFREEYLFNFPVINILD 119
QD+++M G IFR+ L + P I D
Sbjct: 200 QDMWRMSG-IFRDVSLLHKPTTQISD 224
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II
(PSI-II), glycosyl hydrolase family 2, jelly-roll fold;
2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB:
3dec_A
Length = 1010
Score = 28.2 bits (63), Expect = 7.5
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 94 QDLFKMFGKIFREEYLFNFPVINILD 119
QD++++ G I R+ YL++ P I D
Sbjct: 206 QDMWRLSG-IERDVYLYSTPKQYIAD 230
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.141 0.430
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,288,572
Number of extensions: 509201
Number of successful extensions: 1432
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1287
Number of HSP's successfully gapped: 96
Length of query: 529
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 431
Effective length of database: 3,965,535
Effective search space: 1709145585
Effective search space used: 1709145585
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (26.8 bits)