RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14422
(529 letters)
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 198 bits (503), Expect = 4e-58
Identities = 104/482 (21%), Positives = 179/482 (37%), Gaps = 33/482 (6%)
Query: 60 RKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILD 119
IPGP + + GN Y+ + K +GK++ Y PV+ I D
Sbjct: 9 LGIPGPTPLPFLGNILSYHK--------GFCMFDMECHKKYGKVWGF-YDGQQPVLAITD 59
Query: 120 RDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPEL 179
D + VL S F R P + + + + E W LR+ L+P
Sbjct: 60 PDMIKTVLVKECYSVFTNRRPFGPVGFMKS---------AISIAEDEEWKRLRSLLSPTF 110
Query: 180 TSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGF 239
TSG++ P + + + +R + V D ++ + G +
Sbjct: 111 TSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTLKDVF-GAYSMDVITSTSFGVNIDS 168
Query: 240 LGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVD 299
L DP + +R F+ + F L P L + + + + + V
Sbjct: 169 LNNPQDPFVENTKKLLRFDFLDPFFLSITV-FPFLIPILEVLNICVFPREVTNFLRKSVK 227
Query: 300 EALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKK-------GAIIDFIAAGIKTFGNTL 352
+ M K I FI AG +T + L
Sbjct: 228 RMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVL 287
Query: 353 VFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIA 412
F++Y +A + Q+K+ EEI V T + +YL + E+ RL P A ++
Sbjct: 288 SFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLE 347
Query: 413 RITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEK-NKFLVCP 471
R+ + +E++G IP G V++ ++ D + + ++F PER+ + + + ++ P
Sbjct: 348 RVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTP 407
Query: 472 FGVGRRICPGKRFTELELKVCLASIVREFKV----GFNGTLNLEFEFLLTPTSPTSFIFE 527
FG G R C G RF + +K+ L +++ F L L LL P P E
Sbjct: 408 FGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVE 467
Query: 528 PR 529
R
Sbjct: 468 SR 469
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 182 bits (462), Expect = 3e-52
Identities = 92/478 (19%), Positives = 159/478 (33%), Gaps = 29/478 (6%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDD 122
PGP + GN L S+ L + +G +F YL + PV+ + D
Sbjct: 5 PGPSPLPVLGNLLQMDR-------KGLLRSFLRLREKYGDVFTV-YLGSRPVVVLCGTDA 56
Query: 123 LFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSG 182
+ L A F R V + G++ GE W LR +
Sbjct: 57 IREALVDQA-EAFSGRGKIAVVDP-------IFQGYGVIFANGERWRALRRFSLATMRDF 108
Query: 183 RIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGFLGE 242
+ R + E R+ E+ L+ ++L L + + C+++ GKR +
Sbjct: 109 GMGKRSVEE--RIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 166
Query: 243 DIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVDEAL 302
++ + S + + ++ ++ I I + V++
Sbjct: 167 VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHR 226
Query: 303 A--DEEDTCSLDTDVQTVFMSILNAPDVDIRDK--KGAIIDFIAAGIKTFGNTLVFVLYL 358
A D + + P + + ++ AG +T TL + L
Sbjct: 227 ATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLL 286
Query: 359 IAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARIT-ET 417
+ K E++ +EI V G H+ + Y A I E RL P T
Sbjct: 287 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 346
Query: 418 PLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETE-KNKFLVCPFGVGR 476
+ GY IP + + A D F F P +L K PF +G+
Sbjct: 347 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGK 406
Query: 477 RICPGKRFTELELKVCLASIVREFKVGF---NGTLNLEFEFLLTPTSPTSF--IFEPR 529
RIC G+ EL + +I++ F + ++L P S+ F R
Sbjct: 407 RICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQIRFLAR 464
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 174 bits (440), Expect = 4e-49
Identities = 85/477 (17%), Positives = 166/477 (34%), Gaps = 26/477 (5%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDD 122
PGP + + GN + + H + +++G+IF L + + D
Sbjct: 2 PGPPGLPFIGNIYSLAA-----SSELPHVYMRKQSQVYGEIFSL-DLGGISTVVLNGYDV 55
Query: 123 LFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSG 182
+ L + F RP + L + G W R
Sbjct: 56 VKECLVHQSE-IFADRPCLPL------FMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYF 108
Query: 183 RIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGFLGE 242
+ ++ E+ F +L +I G+R +
Sbjct: 109 GYGQKSFES--KILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDT 166
Query: 243 DIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVDEAL 302
D ++ + V AS P+ + P + +L ++ +YD +SR +++A
Sbjct: 167 DFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKAS 226
Query: 303 ADEEDTCSLDTDVQTVFMSILNAPDV----DIRDKKGAIIDFIAAGIKTFGNTLVFVLYL 358
+ + + D + ++ + I AG +T N L + +
Sbjct: 227 VNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILF 286
Query: 359 IAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQ-IARITET 417
+A Q ++ +EI + GP+ + + Y +A + E R P I T
Sbjct: 287 MALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSE 346
Query: 418 PLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEK-NKFLVCPFGVGR 476
+ GY IP G+ ++ + + DE + + F PER+L K + PF +GR
Sbjct: 347 DAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGR 406
Query: 477 RICPGKRFTELELKVCLASIVREFKVGF--NGTLNLEFEFLLTPTSPTSF--IFEPR 529
R C G+ +E+ + ++++ F + F +L+ +T P + E R
Sbjct: 407 RHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMT-LQPQPYLICAERR 462
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 155 bits (392), Expect = 2e-42
Identities = 89/446 (19%), Positives = 157/446 (35%), Gaps = 24/446 (5%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDD 122
PGP + GN + + +S +L K++G +F Y P++ + +
Sbjct: 6 PGPTPLPVIGNILQI-------GIKDISKSLTNLSKVYGPVFTL-YFGLKPIVVLHGYEA 57
Query: 123 LFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSG 182
+ L +F R + + G+V G+ W +R L +
Sbjct: 58 VKEALIDLG-EEFSGRGIFPLAERANR-------GFGIVFSNGKKWKEIRRFSLMTLRNF 109
Query: 183 RIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGFLGE 242
+ R + + RV E+ L+ S + C++I KR + +
Sbjct: 110 GMGKRSIED--RVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQ 167
Query: 243 DIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVDEAL 302
+M KL ++ C + + KL+K+ + I V E
Sbjct: 168 QFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQ 227
Query: 303 ADEEDTCSLDTDVQTVFMSILNAP----DVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYL 358
+ D + + I + +D AG +T TL + L L
Sbjct: 228 ESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLL 287
Query: 359 IAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARITE-T 417
+ K+ K+ EEI V G ++ ++ + Y A + E R + P
Sbjct: 288 LLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTC 347
Query: 418 PLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETE-KNKFLVCPFGVGR 476
++ Y IP G+ +L D FP + F P +L E K PF G+
Sbjct: 348 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 407
Query: 477 RICPGKRFTELELKVCLASIVREFKV 502
RIC G+ +EL + L SI++ F +
Sbjct: 408 RICVGEALAGMELFLFLTSILQNFNL 433
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 137 bits (344), Expect = 6e-36
Identities = 82/474 (17%), Positives = 162/474 (34%), Gaps = 29/474 (6%)
Query: 60 RKIPGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILD 119
+++P P++ N + + +K ++ + G+IF+ +
Sbjct: 1 KEMPQPKTFGELKNLPLLNT-------DKPVQALMKIADELGEIFKF-EAPGRVTRYLSS 52
Query: 120 RDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPEL 179
+ + +R L + R L + W L P
Sbjct: 53 QRLIKEAC-DESRFDKNLSQA------LKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSF 105
Query: 180 TSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGF 239
+ + ++ + + + +++ + F
Sbjct: 106 SQQAMKGYHAMMVDIAVQLVQ--KWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSF 163
Query: 240 LGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVD 299
+ P +T + A+ E + P + + + + D++ + +
Sbjct: 164 YRDQPHPFITSMVRALDEAMNKLQRANPDDPAY----DENKRQFQEDIKVMNDLVDKIIA 219
Query: 300 EALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLI 359
+ A E + L T + P D + + II F+ AG +T L F LY +
Sbjct: 220 DRKASGEQSDDLLTHMLNGKDPETGEPLDD-ENIRYQIITFLIAGHETTSGLLSFALYFL 278
Query: 360 AKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARITETPL 419
KN +K EE V + K ++ KY+ + E+ RL PTAP + +
Sbjct: 279 VKNPHVLQKAAEEAARV-LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDT 337
Query: 420 ELSG-YQIPAGSVLLCHTWQACLDEANF-PQAQEFRPERWLGEETEKNKFLVCPFGVGRR 477
L G Y + G L+ Q D+ + +EFRPER+ + PFG G+R
Sbjct: 338 VLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFKPFGNGQR 396
Query: 478 ICPGKRFTELELKVCLASIVREFKVGFNGTLNLEFEFLLTPTSPTSFI--FEPR 529
C G++F E + L +++ F + L+ + LT P F+ + +
Sbjct: 397 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLT-LKPEGFVVKAKSK 449
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 97.8 bits (242), Expect = 1e-22
Identities = 53/450 (11%), Positives = 118/450 (26%), Gaps = 58/450 (12%)
Query: 86 LNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEVTS 145
L + + ++ + + + L I + + + + P S
Sbjct: 13 LKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKS 72
Query: 146 YYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRH 205
+ + + G + +T R + + +
Sbjct: 73 LFGVN--------AIQGMDGSAHIHRKMLFLSLMT-PPHQKRLAELMTEEWKAAVTRWEK 123
Query: 206 HSCENHSVLCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDT 265
A ++ + G + + D
Sbjct: 124 ADEVVLFEE-------------AKEILCRVACYWAGVPLKE----------TEVKERADD 160
Query: 266 CFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVDEALADEEDTCSLDTDVQTVFMSILNA 325
+ P + K ++ + I +++A A T S + F + +
Sbjct: 161 FIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDG 220
Query: 326 PDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTT 385
+D R +I+ + + + L L +
Sbjct: 221 SQLDSRMAAIELINVLRPIVAISYFLVFSALAL------------------HEHPKYKEW 262
Query: 386 KNIQNAKYLKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEAN 445
N++ + ++E R P P + + + + + G+ +L + D
Sbjct: 263 LRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRL 322
Query: 446 FPQAQEFRPERWLGEETEKNKFLVCPFGVGR----RICPGKRFTELELKVCLASIVREFK 501
+ EFRPER+ E + P G G CPG+ T +K L +V + +
Sbjct: 323 WDHPDEFRPERFAEREENLFDMI--PQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIE 380
Query: 502 VGF-NGTLNLEF-EFLLTPTSPTSFIFEPR 529
+L+ P S R
Sbjct: 381 YDVPEQSLHYSLARMPSLPESGFVMSGIRR 410
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 98.0 bits (242), Expect = 1e-22
Identities = 61/473 (12%), Positives = 133/473 (28%), Gaps = 38/473 (8%)
Query: 63 PGPRSIYYFGNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDD 122
G+ + Q + G + L V+ +
Sbjct: 4 RVSGGHDEHGHLEEF--------RTDPIGLMQRVRDELGDVGTF-QLAGKQVVLLSGSHA 54
Query: 123 LFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSG 182
A + Y P + + L G
Sbjct: 55 NEFFF--RAGDDDLDQAK-----AYPFMTPIFGEGVVFDAS----PERRKEMLHNAALRG 103
Query: 183 RIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGFLGE 242
M + + + + T+ +
Sbjct: 104 EQMKGHAATIEDQVRRMIADWGEAGEIDLLDFF-----------AELTIYTSSACLIGKK 152
Query: 243 DIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVDEAL 302
D + + A E + + P+ + + A+ I
Sbjct: 153 FRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANP 212
Query: 303 ADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKN 362
++ + DV + P + G I + AG T T + L + ++
Sbjct: 213 PTDKSDRDML-DVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 271
Query: 363 TTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARITETPLELS 422
+ +E+ + G + + ++ L+ ++E+ RL P + R+ + E+
Sbjct: 272 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 331
Query: 423 GYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETE--KNKFLVCPFGVGRRICP 480
G++I G ++ + +FP +F P R+ E N++ PFG GR C
Sbjct: 332 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 391
Query: 481 GKRFTELELKVCLASIVREFKV----GFNGTLNLEFEFLLTPTSPTSFIFEPR 529
G F +++K + ++RE++ N + ++ P + + R
Sbjct: 392 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRR 444
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 87.5 bits (215), Expect = 3e-19
Identities = 50/388 (12%), Positives = 101/388 (26%), Gaps = 48/388 (12%)
Query: 114 VINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRT 173
V+ I + LF ++A L N S + L + R
Sbjct: 60 VMQIGKQPGLF----SNAEGSEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRG 115
Query: 174 RLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLIL 233
I L+ + C +
Sbjct: 116 LTLNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDFMTDCALYYPLHVV--------- 166
Query: 234 GKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDI 293
+ + ++ F + + A + ++ YD
Sbjct: 167 ----MTALGVPEDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDY 222
Query: 294 ISRYVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLV 353
+ +C D + + S L+ +D + + AG T ++
Sbjct: 223 F-----NGFTVDRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSG 277
Query: 354 FVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIAR 413
+ ++ + + + + ++E+ R R
Sbjct: 278 GAIIGLS------------------RNPEQLALAKSDPALIPRLVDEAVRWTAPVKSFMR 319
Query: 414 ITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFG 473
E+ G I G ++ A DE F EF R+ N+ L FG
Sbjct: 320 TALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFP------NRHL--GFG 371
Query: 474 VGRRICPGKRFTELELKVCLASIVREFK 501
G +C G+ +LE+K+ ++ + K
Sbjct: 372 WGAHMCLGQHLAKLEMKIFFEELLPKLK 399
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 78.7 bits (192), Expect = 2e-16
Identities = 31/164 (18%), Positives = 51/164 (31%), Gaps = 26/164 (15%)
Query: 338 IDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKAC 397
+ + AG + + + YL+ + + + +
Sbjct: 234 LVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPN------------------A 275
Query: 398 IEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERW 457
+EE R + R +E+ G IP S +L A D FP F R
Sbjct: 276 VEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRD 335
Query: 458 LGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFK 501
L FG G C G+ +LE +V L ++ F
Sbjct: 336 ------TRGHL--SFGQGIHFCMGRPLAKLEGEVALRALFGRFP 371
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 77.2 bits (188), Expect = 8e-16
Identities = 52/413 (12%), Positives = 103/413 (24%), Gaps = 55/413 (13%)
Query: 90 HESYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRK 149
H ++ L + G + + ++ D L +L +S SK
Sbjct: 12 HTEHRTLRE-GGPATWVD-VLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGT 69
Query: 150 SRPDRYTNL-GLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSC 208
+ + + G LR + P ++ R+ V + R
Sbjct: 70 WPLALWVAVENMFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVD---RLAEL 126
Query: 209 ENHSVLCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFG 268
+ + + ++G + V A
Sbjct: 127 PAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDGFRALVD---GVFDTTLDQAEAQANTA 183
Query: 269 LPFWKLFPTPAYLKLIKSEDAIYDIISRYVDEALADEEDTCSLDTDVQTVFMSILNAPDV 328
+ L A + +D +I+ DE D
Sbjct: 184 RLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLS-------------------PE 224
Query: 329 DIRDKKGAIIDFIAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNI 388
++RD ++ I+AG +T N + ++ + + + + A ++
Sbjct: 225 ELRD---TLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGEVTWADVVEETLRHEP 281
Query: 389 QNAKYLKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQ 448
+ G I G +L A
Sbjct: 282 AVKHLP----------------LRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHED 325
Query: 449 AQEFRPERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFK 501
A F R + + L FG G C G +E+ + L S+ F
Sbjct: 326 ADTFDATRTV------KEHL--AFGHGVHFCLGAPLARMEVTLALESLFGRFP 370
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 73.3 bits (178), Expect = 1e-14
Identities = 50/401 (12%), Positives = 101/401 (25%), Gaps = 55/401 (13%)
Query: 101 GKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGL 160
+ + + + D+ V + SK R +
Sbjct: 25 NPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQG--FPELSASGKQAAKAKPTF 82
Query: 161 VNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELA 220
V+ R+ + P T + N P + R +D ++ C N V E A
Sbjct: 83 VDMDPPEHMHQRSMVEPTFTPEAVKNLQ-PYIQRTVDDLLEQMKQKGCANGPVDLVKEFA 141
Query: 221 NRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAY 280
+ I+ L A
Sbjct: 142 LPV--------------------PSYIIYTLLGVPFNDLEYLTQQNAIRTNGSSTAREAS 181
Query: 281 LKLIKSEDAIYDIISRYVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDF 340
+ D + ++ + + E D + ++D D
Sbjct: 182 AANQELLDYLAILVEQRLVEPKDDIISKL---------CTEQVKPGNIDKSDAVQIAFLL 232
Query: 341 IAAGIKTFGNTLVFVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEE 400
+ AG T N + + +A++ ++ ++ + +A
Sbjct: 233 LVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALA------- 285
Query: 401 SFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGE 460
I R + + + + A ++ A DE F EF R
Sbjct: 286 ----------IKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP 335
Query: 461 ETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFK 501
L FG G C + + EL +++ ++F
Sbjct: 336 ----QDPL--GFGFGDHRCIAEHLAKAELTTVFSTLYQKFP 370
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 72.9 bits (177), Expect = 2e-14
Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Query: 397 CIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANF-PQAQEFRPE 455
E PT+ + R + + IPAG L+ DE P A F
Sbjct: 272 VEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLT 331
Query: 456 RWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFK 501
R N+ + FG G +CPG + +E V L ++ F
Sbjct: 332 RT-----SGNRHI--SFGHGPHVCPGAALSRMEAGVALPALYARFP 370
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 71.0 bits (172), Expect = 7e-14
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 434 CHTWQACLDEANFPQAQEFRPERWLGEETEK-NKFLVCPFGVGRRICPGKRFTELELKVC 492
+FP + FRPER+L E ++ PFG+G+R+C G+ F LE +
Sbjct: 292 LVLSPYVTQRLHFPDGEAFRPERFLEERGTPSGRYF--PFGLGQRLCLGRDFALLEGPIV 349
Query: 493 LASIVREFKVGFNGTLNLEFEFLLTP 518
L + R F++ + + L P
Sbjct: 350 LRAFFRRFRLDPLPFPRVLAQVTLRP 375
Score = 38.2 bits (87), Expect = 0.002
Identities = 18/127 (14%), Positives = 33/127 (25%), Gaps = 12/127 (9%)
Query: 90 HESYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRK 149
+ ++F L FP+ I D + + L A + ++ +
Sbjct: 21 LAVLLAWGRAHPRLFL--PLPRFPLALIFDPEGVEGALLAEGTT-KATFQYRALSRLTGR 77
Query: 150 SRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELNRVAEDFNSLIRHHSCE 209
GL+ + GE W R L + F
Sbjct: 78 ---------GLLTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDL 128
Query: 210 NHSVLCF 216
+H +L
Sbjct: 129 DHEMLAL 135
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 71.0 bits (172), Expect = 7e-14
Identities = 58/385 (15%), Positives = 98/385 (25%), Gaps = 60/385 (15%)
Query: 117 ILDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSRPDRYTNLGLVNEQGEIWHLLRTRLT 176
+ V+G + R + R L++ LR +LT
Sbjct: 41 ATAHAVVRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPEHTRLRRKLT 100
Query: 177 PELTSGRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKR 236
P T + M R P + ++ D + + +
Sbjct: 101 PGFTLRK-MQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGA------------- 146
Query: 237 LGFLGEDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISR 296
+ + + R+ F+ K A+ D SR
Sbjct: 147 -------VLCELVGVPRDDRDMFMKLCHGHLDASLS-----------QKRRAALGDKFSR 188
Query: 297 YVDEALADEEDTCSLDTDVQTVFMSILNAPDVDIRDKKGAIIDFIAAGIKTFGNTLVFVL 356
Y+ +A E V +A D ++R V
Sbjct: 189 YLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRG--------------------FCVQ 228
Query: 357 YLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIARITE 416
++A + I ++ + + +A E L RI
Sbjct: 229 VMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAR 288
Query: 417 TPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVGR 476
L L+G +I G ++C A D A P R + FG G
Sbjct: 289 EDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTRE------PIPHV--AFGHGV 340
Query: 477 RICPGKRFTELELKVCLASIVREFK 501
C G LEL+ + R F
Sbjct: 341 HHCLGAALARLELRTVFTELWRRFP 365
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 69.1 bits (167), Expect = 3e-13
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Query: 420 ELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVGRRIC 479
E+ G +I AG + A D FP ER N + FG G C
Sbjct: 295 EIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERS------PNPHV--SFGFGPHYC 346
Query: 480 PGKRFTELELKVCLASIVREFK 501
PG LE ++ + +++
Sbjct: 347 PGGMLARLESELLVDAVLDRVP 368
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 68.3 bits (165), Expect = 6e-13
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Query: 420 ELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVGRRIC 479
E G I G ++ A D F + F R + L +G G +C
Sbjct: 299 EYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD------TSASL--AYGRGPHVC 350
Query: 480 PGKRFTELELKVCLASIVREFK 501
PG LE ++ + +I R F
Sbjct: 351 PGVSLARLEAEIAVGTIFRRFP 372
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 66.7 bits (161), Expect = 2e-12
Identities = 21/89 (23%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 413 RITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPF 472
R+ + + G I AG +LC A DEA P R + F
Sbjct: 295 RLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRA------AVSDV--GF 346
Query: 473 GVGRRICPGKRFTELELKVCLASIVREFK 501
G G C G L++ ++ R F
Sbjct: 347 GHGIHYCVGAALARSMLRMAYQTLWRRFP 375
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 66.4 bits (160), Expect = 2e-12
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 389 QNAKYLKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQ 448
K +EE+ R P + R+T+ +++ I G ++ A DE F
Sbjct: 235 VREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKD 294
Query: 449 AQEFRPERWLGEETEKNKFLVCPFGVGRRICPGKRFTELELKVCLASIVREFKV 502
F P+R N L FG G +C G LE ++ L ++F+V
Sbjct: 295 PDSFIPDRT------PNPHL--SFGSGIHLCLGAPLARLEARIALEEFAKKFRV 340
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 64.9 bits (156), Expect = 6e-12
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 11/148 (7%)
Query: 354 FVLYLIAKNTTCQEKIYEEIINVAGPHQDFTTKNIQNAKYLKACIEESFRLLPTAPQIAR 413
+L LIA N T I +I+ + + I+ IEE+ R P + R
Sbjct: 203 IILLLIAGNETTTNLISNSVID---FTRFNLWQRIREENLYLKAIEEALRYSPPVMRTVR 259
Query: 414 ITETPLELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFG 473
T+ ++L I G + A DE F ++F P+R N L FG
Sbjct: 260 KTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN------PNPHL--SFG 311
Query: 474 VGRRICPGKRFTELELKVCLASIVREFK 501
G +C G LE ++ + + F+
Sbjct: 312 SGIHLCLGAPLARLEARIAIEEFSKRFR 339
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 63.6 bits (153), Expect = 2e-11
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 424 YQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVGRRICPGKR 483
+ G ++L A D +FP +R L FG G+ CPG
Sbjct: 296 VLVRKGELVLVLLEGANFDPEHFPNPGSIELDRP-----NPTSHL--AFGRGQHFCPGSA 348
Query: 484 FTELELKVCLASIVREFK 501
++ + +++++
Sbjct: 349 LGRRHAQIGIEALLKKMP 366
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 61.3 bits (147), Expect = 1e-10
Identities = 18/82 (21%), Positives = 25/82 (30%), Gaps = 8/82 (9%)
Query: 420 ELSGYQIPAGSVLLCHTWQACLDEANFPQAQEFRPERWLGEETEKNKFLVCPFGVGRRIC 479
E G Q+ G +L + LDE R K FG G +C
Sbjct: 296 EFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQ------KVSHT--TFGHGSHLC 347
Query: 480 PGKRFTELELKVCLASIVREFK 501
G+ E+ V L +
Sbjct: 348 LGQHLARREIIVTLKEWLTRIP 369
>d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate
synthase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 410
Score = 30.6 bits (69), Expect = 0.54
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 186 NRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGFLGEDID 245
N F+P L ++AE + I ++ S+L + + + + CT + K++ + ED
Sbjct: 291 NTFVPGLVQLAEHEGTFIAGDDLKD-SLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAG 349
Query: 246 PIMTKLAVA 254
V
Sbjct: 350 KFENFYPVL 358
>d1q8ia1 c.55.3.5 (A:2-389) Exonuclease domain of family B DNA
polymerases {Escherichia coli [TaxId: 562]}
Length = 388
Score = 28.1 bits (62), Expect = 3.1
Identities = 8/49 (16%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 387 NIQNAKYLKACIEESFRLLPTAPQIARITETPLELSGYQIPAGSVLLCH 435
N+++ + + I ++P + A + P++ G + A L
Sbjct: 331 NLKDCELVTQ-IFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFP 378
>d2gc9a1 b.60.1.6 (A:1-178) P-coumaric acid decarboxylase, pdc
{Lactobacillus plantarum [TaxId: 1590]}
Length = 178
Score = 27.1 bits (60), Expect = 3.7
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 54 PYFDTLRKIPGPRSIYYFGNRWMYYSWF 81
F TL G IY + N W Y +
Sbjct: 3 KTFKTLDDFLGTHFIYTYDNGWEYEWYA 30
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA
{Salmonella typhimurium [TaxId: 90371]}
Length = 140
Score = 26.9 bits (59), Expect = 3.8
Identities = 7/61 (11%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Query: 182 GRIMNRFLPELNRVAEDFN-----SLIRHHSCENHSVLCFDELANRMGLESACTLILGKR 236
R++ + ++ + + H+ + +LA +G+E + +
Sbjct: 10 ARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQ 69
Query: 237 L 237
L
Sbjct: 70 L 70
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia
coli [TaxId: 562]}
Length = 235
Score = 27.5 bits (60), Expect = 4.2
Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 1/72 (1%)
Query: 72 GNRWMYYSWFGPYKLNKLHESYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASA 131
G + P + L + F E L + L D+F+ +G S
Sbjct: 120 GQVLDWTGDVTPEDKCHCCQFPAPL-RPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSG 178
Query: 132 RSKFPLRPPNEV 143
+E
Sbjct: 179 HVYPAAGFVHEA 190
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 26.9 bits (58), Expect = 5.7
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 86 LNKLHESYQDLFKMFGKIFREEYLFNFPVINI 117
L +LH ++ E L N PV+ +
Sbjct: 183 LEQLHGQHEAWLIHKTTKLHFEALMNIPVLVL 214
>d1y6kr2 b.1.2.1 (R:101-206) Interleukin-10 receptor 1, IL-10R1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 25.6 bits (56), Expect = 7.0
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 9/62 (14%)
Query: 92 SYQDLFKMFGKIFREEYLFNFPVINILDRDDLFLVLGASARSKFPLRPPNEVTSYYRKSR 151
+Y+ +F F + E + P +F L EV + + +
Sbjct: 35 TYESIFSHFREY--EIAIRKVP-------GQFTFTHKKVKHEQFSLLTSGEVGEFCVQVK 85
Query: 152 PD 153
P
Sbjct: 86 PS 87
>d1k7ka_ c.51.4.1 (A:) Hypothetical protein YggV {Escherichia coli
[TaxId: 562]}
Length = 209
Score = 26.3 bits (57), Expect = 8.9
Identities = 9/43 (20%), Positives = 14/43 (32%)
Query: 186 NRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESA 228
F+ A + + + S L D L G+ SA
Sbjct: 56 LTFIENAILKARHAAKVTALPAIADDSGLAVDVLGGAPGIYSA 98
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159
{Deinococcus radiodurans [TaxId: 1299]}
Length = 172
Score = 25.8 bits (56), Expect = 9.0
Identities = 20/125 (16%), Positives = 35/125 (28%), Gaps = 17/125 (13%)
Query: 182 GRIMNRFLPELNRVAEDFNSLIRHHSCENHSVLCFDELANRMGLESACTLILGKRLGFLG 241
GR + R A ++ L+ + L EL+ + T RL G
Sbjct: 48 GREIERTYAASGLNAAGWDLLLTLYRSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKG 107
Query: 242 EDIDPIMTKLAVAVREQFIASRDTCFGLPFWKLFPTPAYLKLIKSEDAIYDIISRYVDEA 301
I R+ + TP L+ + ++ V
Sbjct: 108 -----------------LIERREDERDRRSASIRLTPQGRALVTHLLPAHLATTQRVLAP 150
Query: 302 LADEE 306
L+ +E
Sbjct: 151 LSAQE 155
>d1c4ka3 d.125.1.1 (A:570-730) Ornithine decarboxylase C-terminal
domain {Lactobacillus sp., strain 30a [TaxId: 1591]}
Length = 161
Score = 25.9 bits (57), Expect = 9.3
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 5/110 (4%)
Query: 149 KSRPDRYTNLGLVNEQGEIWHLLRTRLTPELTSGRIMNRFLPELN-RVAEDFNSLIRHHS 207
+ +RY + E+ + T + F PE E IR+H+
Sbjct: 12 AANEERYNGYTIRELCQELHDFYKNNNTFTYQKRLFLREFFPEQGMLPYEARQEFIRNHN 71
Query: 208 CENHSVLCFDELANRMGLESACTLILGKRLGFLGEDIDPIMTKLAVAVRE 257
+ +++ + LE A G GE K +++
Sbjct: 72 KL----VPLNKIEGEIALEGALPYPPGVFCVAPGEKWSETAVKYFTILQD 117
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.141 0.430
Gapped
Lambda K H
0.267 0.0547 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,037,290
Number of extensions: 100842
Number of successful extensions: 352
Number of sequences better than 10.0: 1
Number of HSP's gapped: 320
Number of HSP's successfully gapped: 39
Length of query: 529
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 439
Effective length of database: 1,171,896
Effective search space: 514462344
Effective search space used: 514462344
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.4 bits)