BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14425
(114 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++ RL HPHI L++V+ +V +L Y+ QR ++ E EAR+ F+QI
Sbjct: 66 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 125
Query: 82 VRACHAQGIVLRDLK 96
V CH IV RDLK
Sbjct: 126 VEYCHRHKIVHRDLK 140
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++ RL HPHI L++V+ +V +L Y+ QR ++ E EAR+ F+QI
Sbjct: 65 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 124
Query: 82 VRACHAQGIVLRDLK 96
V CH IV RDLK
Sbjct: 125 VEYCHRHKIVHRDLK 139
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++ RL HPHI L++V+ +V +L Y+ QR ++ E EAR+ F+QI
Sbjct: 56 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 115
Query: 82 VRACHAQGIVLRDLK 96
V CH IV RDLK
Sbjct: 116 VEYCHRHKIVHRDLK 130
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++ RL HPHI L++V+ +V +L Y+ QR ++ E EAR+ F+QI
Sbjct: 60 SYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 119
Query: 82 VRACHAQGIVLRDLK 96
V CH IV RDLK
Sbjct: 120 VEYCHRHKIVHRDLK 134
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YLV SG ++ Y+ R+KE EAR FRQI V+ CH
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 131 QKFIVHRDLK 140
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YLV SG ++ Y+ R+KE EAR FRQI V+ CH
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 131 QKFIVHRDLK 140
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YLV SG ++ Y+ R+KE EAR FRQI V+ CH
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 131 QKFIVHRDLK 140
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YLV SG ++ Y+ R+KE EAR FRQI V+ CH
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 131
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 132 QKYIVHRDLK 141
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YLV SG ++ Y+ R+KE EAR FRQI V+ CH
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 131 QKFIVHRDLK 140
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YLV SG ++ Y+ R+KE EAR FRQI V+ CH
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 131 QKFIVHRDLK 140
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YL+ SG ++ Y+ R+KE EAR FRQI V+ CH
Sbjct: 69 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 129 QKRIVHRDLK 138
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YL+ SG ++ Y+ R+KE EAR FRQI V+ CH
Sbjct: 72 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 132 QKRIVHRDLK 141
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++ +L HPHI L++V+ +V G+L Y+ ++KR+ E E R+ F+QI
Sbjct: 61 SYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICA 120
Query: 82 VRACHAQGIVLRDLK 96
+ CH IV RDLK
Sbjct: 121 IEYCHRHKIVHRDLK 135
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YLV SG ++ Y+ +KE EAR FRQI V+ CH
Sbjct: 64 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCH 123
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 124 QKFIVHRDLK 133
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP+I L EV+ +K YLV SG ++ Y+ R KE EAR FRQI V+ CH
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 87 AQGIVLRDLK 96
+ IV RDLK
Sbjct: 131 QKFIVHRDLK 140
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 1 MAGIVVVLEIMSREASGNLLSAHYRLDS---------HPHINSLHEVLLGDKLAYLVFPP 51
+ G +V ++IM + G+ L R+ + H HI L+ VL ++V
Sbjct: 33 LTGEMVAIKIMDKNTLGSDLP---RIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89
Query: 52 C-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVF 102
C G+L Y+ + RL E E R +FRQI V H+QG RDLK +F
Sbjct: 90 CPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF 141
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+L HPHI L++V+ ++V SG +L Y+ + R++E EAR+LF+QI V
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 84 ACHAQGIVLRDLK 96
CH +V RDLK
Sbjct: 126 YCHRHMVVHRDLK 138
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+L HPHI L++V+ ++V SG +L Y+ + R++E EAR+LF+QI V
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 84 ACHAQGIVLRDLK 96
CH +V RDLK
Sbjct: 126 YCHRHMVVHRDLK 138
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RL HP+I LH+ + + YLVF +G +L + R+ EA+A +QI E+V
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 84 ACHAQGIVLRDLKLRKFVFCNAQRSVGHELK 114
CH GIV RDLK + A +S G +K
Sbjct: 118 HCHLNGIVHRDLKPENLLL--ASKSKGAAVK 146
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+L HPHI L++V+ ++V SG +L Y+ + RL E E+R+LF+QI V
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD 130
Query: 84 ACHAQGIVLRDLK 96
CH +V RDLK
Sbjct: 131 YCHRHMVVHRDLK 143
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RL HP+I LH+ + + YLVF +G +L + R+ EA+A +QI E+V
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 84 ACHAQGIVLRDLKLRKFVFCNAQRSVGHELK 114
CH GIV RDLK + A +S G +K
Sbjct: 118 HCHLNGIVHRDLKPENLLL--ASKSKGAAVK 146
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I LH+ + + YLVF +G +L + R+ EA+A +QI E++ CH+
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGHEL 113
GIV R+LK + + + +L
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKL 172
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I LH+ + + YLVF +G +L + R+ EA+A +QI E++ CH+
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGHEL 113
GIV R+LK + + + +L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKL 149
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I LH+ + + YLVF +G +L + R+ EA+A +QI E++ CH+
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGHEL 113
GIV R+LK + + + +L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKL 149
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I LH+ + + YLVF +G +L + R+ EA+A +QI E++ CH+
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGHEL 113
GIV R+LK + + + +L
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKL 148
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RL HP+I LH+ + + YL+F +G +L + R+ EA+A +QI E V
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124
Query: 84 ACHAQGIVLRDLK 96
CH G+V R+LK
Sbjct: 125 HCHQMGVVHRNLK 137
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 13 REASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEA 71
REA+ + ++ HP+I L + + +LVF G+L Y+ ++ L E E
Sbjct: 54 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 113
Query: 72 RKLFRQIAETVRACHAQGIVLRDLK 96
RK+ R + E + A H IV RDLK
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLK 138
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RL HP+I LH+ + + YL+F +G +L + R+ EA+A +QI E V
Sbjct: 76 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 135
Query: 84 ACHAQGIVLRDLK 96
CH G+V RDLK
Sbjct: 136 HCHQMGVVHRDLK 148
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 13 REASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEA 71
REA+ + ++ HP+I L + + +LVF G+L Y+ ++ L E E
Sbjct: 67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 126
Query: 72 RKLFRQIAETVRACHAQGIVLRDLK 96
RK+ R + E + A H IV RDLK
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLK 151
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 13 REASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRKRLKEAEA 71
REA+ + ++ HP+I L + + +LVF G+L Y+ ++ L E E
Sbjct: 67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET 126
Query: 72 RKLFRQIAETVRACHAQGIVLRDLK 96
RK+ R + E + A H IV RDLK
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLK 151
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HPHI +L + +LVF G+L Y+ ++ L E E R + R + E V HA
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
Query: 88 QGIVLRDLK 96
IV RDLK
Sbjct: 219 NNIVHRDLK 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 8 LEIMSREASGNL---LSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQR 63
++I+S+ N ++A + HP+I LHEV +LV +G +L ++++
Sbjct: 41 VKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK 100
Query: 64 KRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV 109
K E EA + R++ V H G+V RDLK +F + ++
Sbjct: 101 KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL 146
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 23 HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++R HP+I EV+L LA ++ G+L+ + R E EAR F+Q+
Sbjct: 69 NHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG 128
Query: 82 VRACHAQGIVLRDLKL 97
V CH+ I RDLKL
Sbjct: 129 VSYCHSMQICHRDLKL 144
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RL H +I LH+ + + YLVF +G +L + R+ EA+A +QI E V
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 117
Query: 84 ACHAQGIVLRDLK 96
CH G+V RDLK
Sbjct: 118 HCHQMGVVHRDLK 130
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+E + YLV C+G +L V ++ +E++A ++ + + V CH
Sbjct: 64 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 87 AQGIVLRDLKLRKFVF 102
+ RDLK F+F
Sbjct: 124 KLNVAHRDLKPENFLF 139
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+E + YLV C+G +L V ++ +E++A ++ + + V CH
Sbjct: 81 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 87 AQGIVLRDLKLRKFVF 102
+ RDLK F+F
Sbjct: 141 KLNVAHRDLKPENFLF 156
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
R HP+I +L +V K Y+V G+L + ++K E EA + I +TV
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVE 130
Query: 84 ACHAQGIVLRDLKLRKFVFCN 104
HAQG+V RDLK ++ +
Sbjct: 131 YLHAQGVVHRDLKPSNILYVD 151
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
R HP+I +L +V K Y+V G+L + ++K E EA + I +TV
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVE 130
Query: 84 ACHAQGIVLRDLKLRKFVFCN 104
HAQG+V RDLK ++ +
Sbjct: 131 YLHAQGVVHRDLKPSNILYVD 151
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 23 HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++R HP+I EV+L LA ++ G+L + R E EAR F+Q+
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 82 VRACHAQGIVLRDLKL 97
V CHA + RDLKL
Sbjct: 128 VSYCHAMQVCHRDLKL 143
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 23 HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++R HP+I EV+L LA ++ G+L + R E EAR F+Q+
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 82 VRACHAQGIVLRDLKL 97
V CHA + RDLKL
Sbjct: 128 VSYCHAMQVCHRDLKL 143
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.1 bits (100), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 23 HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++R HP+I EV+L LA ++ G+L + R E EAR F+Q+
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 127
Query: 82 VRACHAQGIVLRDLKL 97
V CHA + RDLKL
Sbjct: 128 VSYCHAMQVCHRDLKL 143
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 23 HYRLDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAET 81
++R HP+I EV+L LA ++ G+L + R E EAR F+Q+
Sbjct: 67 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG 126
Query: 82 VRACHAQGIVLRDLKL 97
V CHA + RDLKL
Sbjct: 127 VSYCHAMQVCHRDLKL 142
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 50 PPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
P DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 91 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIK 137
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35 LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
L++ + D+ Y+V + DL+S+++++K + E + ++ + E V H GIV D
Sbjct: 93 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 152
Query: 95 LKLRKFVFCNA 105
LK F+ +
Sbjct: 153 LKPANFLIVDG 163
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35 LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
L++ + D+ Y+V + DL+S+++++K + E + ++ + E V H GIV D
Sbjct: 93 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 152
Query: 95 LKLRKFVFCNA 105
LK F+ +
Sbjct: 153 LKPANFLIVDG 163
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKR----LKEAEARKLFRQIAETVR 83
HPHI L E D + Y+VF G DL + +R EA A RQI E +R
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 84 ACHAQGIVLRDLKLRKFVFCNAQRS 108
CH I+ RD+K + + + S
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENS 169
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35 LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
L++ + D+ Y+V + DL+S+++++K + E + ++ + E V H GIV D
Sbjct: 77 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 136
Query: 95 LKLRKFVFCNA 105
LK F+ +
Sbjct: 137 LKPANFLIVDG 147
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35 LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
L++ + D+ Y+V + DL+S+++++K + E + ++ + E V H GIV D
Sbjct: 73 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 132
Query: 95 LKLRKFVFCNA 105
LK F+ +
Sbjct: 133 LKPANFLIVDG 143
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 35 LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRD 94
L++ + D+ Y+V + DL+S+++++K + E + ++ + E V H GIV D
Sbjct: 121 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 180
Query: 95 LKLRKFVFCNA 105
LK F+ +
Sbjct: 181 LKPANFLIVDG 191
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
R HP+I +L +V K YLV G+L + ++K E EA + I +TV
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE 135
Query: 84 ACHAQGIVLRDLKLRKFVFCN 104
H+QG+V RDLK ++ +
Sbjct: 136 YLHSQGVVHRDLKPSNILYVD 156
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RL HP+I LH+ + + YLVF +G +L + R+ EA+A QI E+V
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 84 ACHAQGIVLRDLK 96
H IV RDLK
Sbjct: 145 HIHQHDIVHRDLK 157
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 1 MAGIVV----VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-- 54
AG VV +L+ +E ++ H LD +PH+ H D Y+V C
Sbjct: 54 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 112
Query: 55 --DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV 109
+LH ++RK + E EAR RQ + V+ H ++ RDLKL +F N V
Sbjct: 113 LLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMDV 165
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQR-KRLKEAEARKLFRQIAETVRACH 86
HP I L+ YLV C +G+++ Y++ R K E EAR QI + H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 87 AQGIVLRDLKLRKFVFC 103
+ GI+ RDL L +
Sbjct: 130 SHGILHRDLTLSNLLLT 146
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
R HP+I +L +V K YLV G+L + ++K E EA + I +TV
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE 135
Query: 84 ACHAQGIVLRDLKLRKFVFCN 104
H+QG+V RDLK ++ +
Sbjct: 136 YLHSQGVVHRDLKPSNILYVD 156
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 1 MAGIVV----VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-- 54
AG VV +L+ +E ++ H LD +PH+ H D Y+V C
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 55 --DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+LH ++RK + E EAR RQ + V+ H ++ RDLKL
Sbjct: 129 LLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 1 MAGIVV----VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-- 54
AG VV +L+ +E ++ H LD +PH+ H D Y+V C
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 55 --DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+LH ++RK + E EAR RQ + V+ H ++ RDLKL
Sbjct: 129 LLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 1 MAGIVV----VLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-- 54
AG VV +L+ +E ++ H LD +PH+ H D Y+V C
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 55 --DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+LH ++RK + E EAR RQ + V+ H ++ RDLKL
Sbjct: 129 LLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKL 170
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 50 PPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
P DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 91 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 137
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 170
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 170
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 50 PPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
P DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 91 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 137
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 123 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 164
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 170
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 184
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 142
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 176
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 148 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 189
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 129 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 170
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 50 PPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
P DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 94 PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 140
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 184
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 156
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 116 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 157
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 142
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 115 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 156
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 128 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 169
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 141
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 184
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 100 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 141
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL ++ +R L+E AR F Q+ E VR CH G++ RD+K
Sbjct: 101 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIK 142
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKR----LKEAEARKLFRQIAETVR 83
HPHI L E D + Y+VF G DL + +R EA A RQI E +R
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 84 ACHAQGIVLRDLK 96
CH I+ RD+K
Sbjct: 145 YCHDNNIIHRDVK 157
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKR----LKEAEARKLFRQIAETVR 83
HPHI L E D + Y+VF G DL + +R EA A RQI E +R
Sbjct: 87 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 84 ACHAQGIVLRDLK 96
CH I+ RD+K
Sbjct: 147 YCHDNNIIHRDVK 159
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I L+E YLV +G +L + RKR E +A ++ RQ+ + H
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 88 QGIVLRDLK 96
IV RDLK
Sbjct: 145 NKIVHRDLK 153
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+LD HP+I L E+L Y+V +G +L + +RKR E +A ++ +Q+ +
Sbjct: 77 KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 84 ACHAQGIVLRDLK 96
H IV RDLK
Sbjct: 136 YMHKHNIVHRDLK 148
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I L+E YLV +G +L + RKR E +A ++ RQ+ + H
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 88 QGIVLRDLK 96
IV RDLK
Sbjct: 168 NKIVHRDLK 176
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I L+E YLV +G +L + RKR E +A ++ RQ+ + H
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 88 QGIVLRDLK 96
IV RDLK
Sbjct: 145 NKIVHRDLK 153
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I L+E YLV +G +L + RKR E +A ++ RQ+ + H
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 88 QGIVLRDLK 96
IV RDLK
Sbjct: 169 NKIVHRDLK 177
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPP-CSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+E YLV G+L + RKR E +A ++ RQ+ + H
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 87 AQGIVLRDLK 96
IV RDLK
Sbjct: 150 KNKIVHRDLK 159
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DL Y+ ++ L E +R F Q+ ++ CH++G+V RD+K
Sbjct: 125 DLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIK 166
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 25 RLDSHP-HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+L H I L++ + D+ Y+V + DL+S+++++K + E + ++ + E V
Sbjct: 63 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 84 ACHAQGIVLRDLKLRKFVFCNA 105
H GIV DLK F+ +
Sbjct: 123 TIHQHGIVHSDLKPANFLIVDG 144
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 25 RLDSHP-HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+L H I L++ + D+ Y+V + DL+S+++++K + E + ++ + E V
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 84 ACHAQGIVLRDLKLRKFVFCNA 105
H GIV DLK F+ +
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDG 191
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 25 RLDSHP-HINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+L H I L++ + D+ Y+V + DL+S+++++K + E + ++ + E V
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 84 ACHAQGIVLRDLKLRKFVFCNA 105
H GIV DLK F+ +
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDG 191
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+LD HP+I L E+L Y+V G+L + +RKR E +A ++ +Q+ +
Sbjct: 77 KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 84 ACHAQGIVLRDLK 96
H IV RDLK
Sbjct: 136 YMHKHNIVHRDLK 148
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
+LD HP+I L E+L Y+V G+L + +RKR E +A ++ +Q+ +
Sbjct: 77 KLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 84 ACHAQGIVLRDLK 96
H IV RDLK
Sbjct: 136 YMHKHNIVHRDLK 148
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP + LH + + V +G DL +++++++L E AR +I+ + H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 87 AQGIVLRDLKL 97
+GI+ RDLKL
Sbjct: 124 ERGIIYRDLKL 134
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP + LH + + V +G DL +++++++L E AR +I+ + H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 87 AQGIVLRDLKL 97
+GI+ RDLKL
Sbjct: 139 ERGIIYRDLKL 149
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP + LH + + V +G DL +++++++L E AR +I+ + H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 87 AQGIVLRDLKL 97
+GI+ RDLKL
Sbjct: 171 ERGIIYRDLKL 181
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP + LH + + V +G DL +++++++L E AR +I+ + H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 87 AQGIVLRDLKL 97
+GI+ RDLKL
Sbjct: 128 ERGIIYRDLKL 138
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 24 YRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
Y+ + +I L E D YLVF G + ++++++K E EA ++ R +A +
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 83 RACHAQGIVLRDLKLRKFVFCNAQRSV 109
H +GI RDLK + C + V
Sbjct: 125 DFLHTKGIAHRDLKPEN-ILCESPEKV 150
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I +LH+V L+ SG +L ++ Q++ L E EA +QI + V H
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGH 111
+ I DLK + + + H
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPH 157
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I +LH++ L+ SG +L ++ +++ L E EA + +QI + V H+
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 88 QGIVLRDLK 96
+ I DLK
Sbjct: 134 KRIAHFDLK 142
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I +LH++ L+ SG +L ++ +++ L E EA + +QI + V H+
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 88 QGIVLRDLK 96
+ I DLK
Sbjct: 148 KRIAHFDLK 156
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I +LH++ L+ SG +L ++ +++ L E EA + +QI + V H+
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 88 QGIVLRDLK 96
+ I DLK
Sbjct: 127 KRIAHFDLK 135
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 42 DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
D+L +++ GDL ++++ +R EA AR +I + H +GI+ RDLKL
Sbjct: 97 DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKL 152
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 29 HPHINSLHEVLLGDK-LAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I EV+L LA ++ G+L + R E EAR F+Q+ V HA
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 88 QGIVLRDLKLRK 99
+ RDLKL
Sbjct: 134 MQVAHRDLKLEN 145
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 26 LDSHPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRA 84
LD P + LH D+L +++ GDL +++Q + KE +A +I+ +
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 85 CHAQGIVLRDLKL 97
H +GI+ RDLKL
Sbjct: 136 LHKRGIIYRDLKL 148
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 25 RLDSHPHINSLHEVLLGDKLAYLVFPPC--SGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
+L HP+I L++ DK Y + C G+L + R + E +A + +Q+ V
Sbjct: 91 KLLDHPNIMKLYD-FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGV 149
Query: 83 RACHAQGIVLRDLK 96
H IV RDLK
Sbjct: 150 TYLHKHNIVHRDLK 163
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 28 SHPHINSLHEV------LLGDKLAYLVFPPCSG-DLHSYVRQRKR---LKEAEARKLFRQ 77
+HP++ S EV L + L L C G DL Y+ Q + LKE R L
Sbjct: 71 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 78 IAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGHEL 113
I+ +R H I+ RDLK V + + H++
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKI 166
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 28 SHPHINSLHEV------LLGDKLAYLVFPPCSG-DLHSYVRQRKR---LKEAEARKLFRQ 77
+HP++ S EV L + L L C G DL Y+ Q + LKE R L
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 78 IAETVRACHAQGIVLRDLKLRKFVFCNAQRSVGHEL 113
I+ +R H I+ RDLK V + + H++
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKI 165
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 36.6 bits (83), Expect = 0.004, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
SHP+I L E+ LV +G +L + ++ E +A +QI E V H
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 87 AQGIVLRDLKLRKFVF 102
GIV RDLK ++
Sbjct: 166 ENGIVHRDLKPENLLY 181
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFR-QIAETVRACHA 87
H +I LH+VL DK LVF C DL Y + E K F Q+ + + CH+
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 88 QGIVLRDLK 96
+ ++ RDLK
Sbjct: 120 RNVLHRDLK 128
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G+L V KRLKEA + F Q+ V+ H GI+ RDLK
Sbjct: 224 GELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 266
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G+L V KRLKEA + F Q+ V+ H GI+ RDLK
Sbjct: 238 GELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 280
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV 109
E +LFRQI E + H+QGI+ RDLK +F + R+V
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRDLKPMN-IFIDESRNV 155
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFR-QIAETVRACHA 87
H +I LH+VL DK LVF C DL Y + E K F Q+ + + CH+
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 88 QGIVLRDLK 96
+ ++ RDLK
Sbjct: 120 RNVLHRDLK 128
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV 109
E +LFRQI E + H+QGI+ RDLK +F + R+V
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRDLKPMN-IFIDESRNV 155
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 27 DSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-------KRLKEAEARKLFRQIA 79
D HP++ + D+ Y+ C+ +L V + K KE L RQIA
Sbjct: 66 DDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 80 ETVRACHAQGIVLRDLKLRKFVFCNAQR 107
V H+ I+ RDLK + + + R
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSR 153
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.4 bits (80), Expect = 0.007, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 27 DSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-------KRLKEAEARKLFRQIA 79
D HP++ + D+ Y+ C+ +L V + K KE L RQIA
Sbjct: 66 DDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 80 ETVRACHAQGIVLRDLKLRKFVFCNAQR 107
V H+ I+ RDLK + + + R
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSR 153
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I +L ++ YL+ SG +L + ++ E +A +L Q+ + V+ H
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 88 QGIVLRDLKLRKFVF 102
GIV RDLK ++
Sbjct: 135 LGIVHRDLKPENLLY 149
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 27 DSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-------KRLKEAEARKLFRQIA 79
D HP++ + D+ Y+ C+ +L V + K KE L RQIA
Sbjct: 84 DDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 80 ETVRACHAQGIVLRDLKLRKFVFCNAQR 107
V H+ I+ RDLK + + + R
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSR 171
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I +L ++ YL+ SG +L + ++ E +A +L Q+ + V+ H
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 88 QGIVLRDLKLRKFVF 102
GIV RDLK ++
Sbjct: 135 LGIVHRDLKPENLLY 149
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I +L ++ YL+ SG +L + ++ E +A +L Q+ + V+ H
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 88 QGIVLRDLKLRKFVF 102
GIV RDLK ++
Sbjct: 135 LGIVHRDLKPENLLY 149
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I +L ++ YL+ SG +L + ++ E +A +L Q+ + V+ H
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 88 QGIVLRDLKLRKFVF 102
GIV RDLK ++
Sbjct: 135 LGIVHRDLKPENLLY 149
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 27 DSHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR-------KRLKEAEARKLFRQIA 79
D HP++ + D+ Y+ C+ +L V + K KE L RQIA
Sbjct: 84 DDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 80 ETVRACHAQGIVLRDLKLRKFVFCNAQR 107
V H+ I+ RDLK + + + R
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSR 171
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.0 bits (79), Expect = 0.012, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I L +V K YLV G +L + R + E +A + +QI + H
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK 164
Query: 88 QGIVLRDLK 96
IV RD+K
Sbjct: 165 HNIVHRDIK 173
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
H ++ +LH+V L+ SG +L ++ Q++ L E EA +QI + V H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGH 111
+ I DLK + + + H
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPH 157
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 132 LQIAHFDLK 140
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 132 LQIAHFDLK 140
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ +G +L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ +G +L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFP-PCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +LHEV L+ G+L ++ +++ L E EA + +QI V H+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 88 QGIVLRDLK 96
I DLK
Sbjct: 133 LQIAHFDLK 141
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
H +I +L ++ YLV SG +L + +R E +A + +Q+ V+ H
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE 124
Query: 88 QGIVLRDLKLRKFVFCNAQRS 108
GIV RDLK ++ + +
Sbjct: 125 NGIVHRDLKPENLLYLTPEEN 145
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
H +I +L ++ YLV SG +L + ++ E +A L RQ+ + V H
Sbjct: 79 HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR 138
Query: 88 QGIVLRDLKLRKFVF 102
GIV RDLK ++
Sbjct: 139 MGIVHRDLKPENLLY 153
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
H ++ +LH+V L+ SG +L ++ Q++ L E EA +QI + V H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGH 111
+ I DLK + + + H
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPH 157
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
H ++ +LH+V L+ SG +L ++ Q++ L E EA +QI + V H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGH 111
+ I DLK + + + H
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPH 157
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
H ++ +LH+V L+ SG +L ++ Q++ L E EA +QI + V H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGH 111
+ I DLK + + + H
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPH 157
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
H ++ +LH+V L+ SG +L ++ Q++ L E EA +QI + V H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 88 QGIVLRDLKLRKFVFCNAQRSVGH 111
+ I DLK + + + H
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPH 157
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.3 bits (77), Expect = 0.016, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP+I L+E + YLV G+L + R++ E +A + +Q+ H
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 88 QGIVLRDLKLRKFVFCNAQR 107
IV RDLK + + R
Sbjct: 123 HNIVHRDLKPENLLLESKSR 142
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G+L V KRLKEA + F Q+ V+ H GI+ RDLK
Sbjct: 105 GELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 147
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 6 VVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG----DLHSYVR 61
++L+ RE +S H L +H H+ H + ++V C +LH +
Sbjct: 52 LLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELH---K 107
Query: 62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+RK L E EAR RQI + H ++ RDLKL
Sbjct: 108 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 143
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G+L V KRLKEA + F Q+ V+ H GI+ RDLK
Sbjct: 99 GELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 141
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 29 HPHINSLHEV--------LLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAE 80
HP++ +LHEV L+G+ +A G+L ++ +++ L E EA + +QI
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVA-------GGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 81 TVRACHAQGIVLRDLK 96
V H+ I DLK
Sbjct: 126 GVYYLHSLQIAHFDLK 141
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G+L V KRLKEA + F Q+ V+ H GI+ RDLK
Sbjct: 99 GELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 141
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G+L V KRLKEA + F Q+ V+ H GI+ RDLK
Sbjct: 98 GELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 140
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G+L V KRLKEA + F Q+ V+ H GI+ RDLK
Sbjct: 99 GELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLK 141
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 70 EARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRSV 109
E +LFRQI E + H+QGI+ R+LK +F + R+V
Sbjct: 117 EYWRLFRQILEALSYIHSQGIIHRNLKPXN-IFIDESRNV 155
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.9 bits (76), Expect = 0.022, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 30 PHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
P + LH D+L +++ GDL +++Q R KE A +IA + ++
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 89 GIVLRDLKL 97
GI+ RDLKL
Sbjct: 462 GIIYRDLKL 470
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 10 IMSREASGNLLS--AHYRLDSHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRL 66
+ + SG LL A + HP+I L+E + YLV G+L + R++
Sbjct: 59 VTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF 118
Query: 67 KEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQRS 108
E +A + +Q+ H IV RDLK + + R
Sbjct: 119 SEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRD 160
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.9 bits (76), Expect = 0.022, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 30 PHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
P + LH D+L +++ GDL +++Q R KE A +IA + ++
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 89 GIVLRDLKL 97
GI+ RDLKL
Sbjct: 141 GIIYRDLKL 149
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 6 VVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG----DLHSYVR 61
++L+ RE +S H L +H H+ H + ++V C +LH +
Sbjct: 54 LLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELH---K 109
Query: 62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+RK L E EAR RQI + H ++ RDLKL
Sbjct: 110 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 145
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.9 bits (76), Expect = 0.024, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 26 LDSHPHINSLHEVLLGD--KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
L H +I +L VL D + YLVF DLH+ +R L+ + + Q+ + ++
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANI-LEPVHKQYVVYQLIKVIK 123
Query: 84 ACHAQGIVLRDLK 96
H+ G++ RD+K
Sbjct: 124 YLHSGGLLHRDMK 136
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 6 VVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG----DLHSYVR 61
++L+ RE +S H L +H H+ H + ++V C +LH +
Sbjct: 54 LLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELH---K 109
Query: 62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+RK L E EAR RQI + H ++ RDLKL
Sbjct: 110 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 145
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 6 VVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG----DLHSYVR 61
++L+ RE +S H L +H H+ H + ++V C +LH +
Sbjct: 58 LLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELH---K 113
Query: 62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+RK L E EAR RQI + H ++ RDLKL
Sbjct: 114 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 149
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 6 VVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG----DLHSYVR 61
++L+ RE +S H L +H H+ H + ++V C +LH +
Sbjct: 78 LLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELH---K 133
Query: 62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+RK L E EAR RQI + H ++ RDLKL
Sbjct: 134 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 169
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 6 VVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG----DLHSYVR 61
++L+ RE +S H L +H H+ H + ++V C +LH +
Sbjct: 76 LLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELH---K 131
Query: 62 QRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
+RK L E EAR RQI + H ++ RDLKL
Sbjct: 132 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 167
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.5 bits (75), Expect = 0.028, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 30 PHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
P + +LH + +L+ +G +L +++ QR+R E E + +I + H
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178
Query: 89 GIVLRDLKLRKFVF 102
GI+ RD+KL +
Sbjct: 179 GIIYRDIKLENILL 192
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 32.7 bits (73), Expect = 0.051, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 46 YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
YLV P DL ++ K L E + L Q+ + +R HA GI+ RDLK
Sbjct: 106 YLVMPFMGTDLGKLMKHEK-LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLK 155
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFR-QIAETVRACHA 87
H +I +LH+++ +K LVF DL Y+ + KLF Q+ + CH
Sbjct: 59 HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 88 QGIVLRDLK 96
Q ++ RDLK
Sbjct: 119 QKVLHRDLK 127
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACHA 87
HP+I SL +V+ ++ LVF DL + + K L++++ + Q+ V CH
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 88 QGIVLRDLK 96
I+ RDLK
Sbjct: 138 HRILHRDLK 146
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.0 bits (71), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKR-LKEAEARKLFRQIAETVRACHA 87
HP+I SL +V+ ++ LVF DL + + K L++++ + Q+ V CH
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 88 QGIVLRDLK 96
I+ RDLK
Sbjct: 138 HRILHRDLK 146
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I ++ K YL+ F P G+L+ +++ R E + ++A+ + CH
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAP-RGELYKELQKHGRFDEQRSATFMEELADALHYCH 132
Query: 87 AQGIVLRDLK 96
+ ++ RD+K
Sbjct: 133 ERKVIHRDIK 142
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I ++ K YL+ F P G+L+ +++ R E + ++A+ + CH
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAP-RGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 87 AQGIVLRDLK 96
+ ++ RD+K
Sbjct: 132 ERKVIHRDIK 141
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I ++ K YL+ F P G+L+ +++ R E + ++A+ + CH
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAP-RGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 87 AQGIVLRDLK 96
+ ++ RD+K
Sbjct: 132 ERKVIHRDIK 141
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 29 HPHINSLH-EVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP + LH DKL +++ G+L ++++ + E AR +IA + H+
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 88 QGIVLRDLK 96
IV RDLK
Sbjct: 158 LNIVYRDLK 166
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 85 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 144 YLHGKGIIHRDLK 156
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 85 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 144 YLHGKGIIHRDLK 156
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSGD-----LHSYVRQRKRLKEAEARKLFRQIAETV 82
HP+I + EV Y+V C G + S + K L E +L +Q+ +
Sbjct: 78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137
Query: 83 RACHAQGIVLRDLKLRKFVFCNA 105
H+Q +V +DLK +F +
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDT 160
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 70 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 128
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 129 YLHGKGIIHRDLK 141
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 88 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 147 YLHGKGIIHRDLK 159
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 88 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 147 YLHGKGIIHRDLK 159
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 88 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 147 YLHGKGIIHRDLK 159
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 86 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 145 YLHGKGIIHRDLK 157
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 88 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 147 YLHGKGIIHRDLK 159
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 86 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 145 YLHGKGIIHRDLK 157
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 86 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 145 YLHGKGIIHRDLK 157
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 91 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 149
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 150 YLHGKGIIHRDLK 162
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 86 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 145 YLHGKGIIHRDLK 157
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 89 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 148 YLHGKGIIHRDLK 160
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 89 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 148 YLHGKGIIHRDLK 160
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 88 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 147 YLHGKGIIHRDLK 159
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 63 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 121
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 122 YLHGKGIIHRDLK 134
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 64 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 122
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 123 YLHGKGIIHRDLK 135
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 26 LDSHPHINSLHEVLLGDKLAYLVFPPCS-GDLHSYVRQRK--RLKEAEARKLFRQIAETV 82
D P +S + K ++ C G L ++ +R+ +L + A +LF QI + V
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 83 RACHAQGIVLRDLK 96
H++ ++ RDLK
Sbjct: 136 DYIHSKKLINRDLK 149
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 65 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 123
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 124 YLHGKGIIHRDLK 136
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 46 YLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
YLVF G + S++ +R+ E EA + + +A + H +GI RDLK
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 46 YLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
YLVF G + S++ +R+ E EA + + +A + H +GI RDLK
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLK 138
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 66 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 124
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 125 YLHGKGIIHRDLK 137
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 29 HPHINSLHEVLL--GDKLAYLVFPPCSGDL------HSYVRQRKR---LKEAEARKLFRQ 77
HP++ SL +V L D+ +L+F DL H + K+ L + L Q
Sbjct: 77 HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 78 IAETVRACHAQGIVLRDLK 96
I + + HA ++ RDLK
Sbjct: 137 ILDGIHYLHANWVLHRDLK 155
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP I LH + YL+ GDL + + + E + + ++A + H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 87 AQGIVLRDLK 96
+ GI+ RDLK
Sbjct: 144 SLGIIYRDLK 153
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G+L Y+R+ E R +I +
Sbjct: 93 RLD-HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 151
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 152 YLHGKGIIHRDLK 164
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP I LH + YL+ GDL + + + E + + ++A + H
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 87 AQGIVLRDLK 96
+ GI+ RDLK
Sbjct: 145 SLGIIYRDLK 154
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 25 RLDSHPHINSLHEVL--LGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETV 82
+LD HP++ L EVL + Y+VF + V K L E +AR F+ + + +
Sbjct: 92 KLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGI 150
Query: 83 RACHAQGIVLRDLK 96
H Q I+ RD+K
Sbjct: 151 EYLHYQKIIHRDIK 164
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGD-LHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP++ +L EV + +LVF C LH R ++ + E + + Q + V CH
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 88 QGIVLRDLK 96
+ RD+K
Sbjct: 121 HNCIHRDVK 129
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 12/99 (12%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP I LH + YL+ GDL + + + E + + ++A + H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 87 AQGIVLRDLKLRKFV-----------FCNAQRSVGHELK 114
+ GI+ RDLK + F ++ S+ HE K
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGD--LHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP + +LH+ D +++ SG + ++ E EA + RQ+ + + H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 87 AQGIVLRDLKLRKFVFCNAQRSVGHELK 114
V DLK +F +RS +ELK
Sbjct: 167 ENNYVHLDLKPENIMF-TTKRS--NELK 191
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 30.0 bits (66), Expect = 0.36, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGD--LHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP + +LH+ D +++ SG + ++ E EA + RQ+ + + H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 87 AQGIVLRDLKLRKFVFCNAQRSVGHELK 114
V DLK +F +RS +ELK
Sbjct: 273 ENNYVHLDLKPENIMF-TTKRS--NELK 297
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 55 DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFV 101
DL +++ + RL E A +FRQ+ V + I+ RD+K V
Sbjct: 116 DLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIV 162
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 43 KLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 43 KLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 77 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 43 KLAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ + YL+ + P G+L+ +++ E + ++A+ + CH
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAP-RGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 87 AQGIVLRDLK 96
+ ++ RD+K
Sbjct: 141 GKKVIHRDIK 150
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 42 DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DKL++++ GDLH ++ Q EA+ R +I + H + +V RDLK
Sbjct: 264 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 318
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 42 DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DKL++++ GDLH ++ Q EA+ R +I + H + +V RDLK
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 42 DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DKL++++ GDLH ++ Q EA+ R +I + H + +V RDLK
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 42 DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
DKL++++ GDLH ++ Q EA+ R +I + H + +V RDLK
Sbjct: 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 77 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 130
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|3EZ2|A Chain A, Partition Protein-Adp Complex
pdb|3EZ2|B Chain B, Partition Protein-Adp Complex
pdb|3EZ6|A Chain A, Structure Of Para-Adp Complex:tetragonal Form
pdb|3EZ6|B Chain B, Structure Of Para-Adp Complex:tetragonal Form
Length = 398
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 26 LDSHPHINS-LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKE 68
+DS PH+++ L L + + PP + D HS ++ RL E
Sbjct: 250 VDSGPHLDAFLKNALASANILFTPLPPATVDFHSSLKYVARLPE 293
>pdb|3EZ7|A Chain A, Partition Protein Apo Form In Space Group I4122
Length = 398
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 26 LDSHPHINS-LHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKE 68
+DS PH+++ L L + + PP + D HS ++ RL E
Sbjct: 250 VDSGPHLDAFLKNALASANILFTPLPPATVDFHSSLKYVARLPE 293
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 44 LAYLVFPPCSG-DLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
+ YL CSG +L + + E +A++ F Q+ V H GI RD+K
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 74 LFRQIAETVRACHAQGIVLRDLKLRKFVFC 103
+F QIAE V H++G++ RDLK F
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFT 198
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPC-SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
+HP + LH + YL+ GDL + + + E + + ++A + H
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 87 AQGIVLRDLK 96
+ GI+ RDLK
Sbjct: 148 SLGIIYRDLK 157
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 28.9 bits (63), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 25 RLDSHPHINSLHEVLLGD-KLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVR 83
RLD HP L+ D KL + + +G L Y+R+ E R +I +
Sbjct: 88 RLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 84 ACHAQGIVLRDLK 96
H +GI+ RDLK
Sbjct: 147 YLHGKGIIHRDLK 159
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 74 LFRQIAETVRACHAQGIVLRDLKLRKFVF 102
+F QIAE V H++G++ RDLK F
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFF 151
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 28.9 bits (63), Expect = 0.82, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 53 SGDLHSYVRQRKRLKEAEARKL----FRQIAETVRACHAQGIVLRDLKLRKFVF 102
+G +H + R+ L + KL RQI + H QGI RD+K F+F
Sbjct: 151 NGSIHGF---RESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 54 GDLHSYVRQRK--RLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G L ++ +R+ +L + A +LF QI + V H++ ++ RDLK
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLK 163
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 29 HPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP + +L D+L +++ G+L ++ + + E AR +I + H+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 88 QGIVLRDLKLRKFV 101
+ +V RD+KL +
Sbjct: 124 RDVVYRDIKLENLM 137
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 29 HPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP + +L D+L +++ G+L ++ + + E AR +I + H+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 88 QGIVLRDLKLRKFV 101
+ +V RD+KL +
Sbjct: 124 RDVVYRDIKLENLM 137
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 29 HPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP + +L D+L +++ G+L ++ + + E AR +I + H+
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 88 QGIVLRDLKLRKFV 101
+ +V RD+KL +
Sbjct: 127 RDVVYRDIKLENLM 140
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 29 HPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP + +L D+L +++ G+L ++ + + E AR +I + H+
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 88 QGIVLRDLKLRKFV 101
+ +V RD+KL +
Sbjct: 129 RDVVYRDIKLENLM 142
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 29 HPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP + +L D+L +++ G+L ++ + + E AR +I + H+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 88 QGIVLRDLKLRKFV 101
+ +V RD+KL +
Sbjct: 124 RDVVYRDIKLENLM 137
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 29 HPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP + +L D+L +++ G+L ++ + + E AR +I + H+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 88 QGIVLRDLKLRKFV 101
+ +V RD+KL +
Sbjct: 124 RDVVYRDIKLENLM 137
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 29 HPHINSLHEVLLG-DKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHA 87
HP + +L D+L +++ G+L ++ + + E AR +I + H+
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 88 QGIVLRDLKLRKFV 101
+ +V RD+KL +
Sbjct: 124 RDVVYRDIKLENLM 137
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 52 CSG-DLHSYVRQRK-RLKEAEARKLFRQIAETVRACHAQGIVLRDLKLRKFVFCNAQ 106
C G L+S VR K L + R++ ++I + + HA+GI+ +DLK + + N +
Sbjct: 111 CKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK 167
>pdb|3GFH|A Chain A, Crystal Structure Of Eutl Shell Protein Of The Bacterial
Ethanolamine Micrompartment
pdb|3GFH|B Chain B, Crystal Structure Of Eutl Shell Protein Of The Bacterial
Ethanolamine Micrompartment
pdb|3MPV|A Chain A, Structure Of Eutl In The Zinc-Induced Open Form
pdb|3MPV|B Chain B, Structure Of Eutl In The Zinc-Induced Open Form
Length = 225
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 31 HINSLHEVLLGDKLAYLVFPP 51
+++S + LGD +AYLV PP
Sbjct: 135 YLSSTAGITLGDPMAYLVAPP 155
>pdb|3I82|A Chain A, Ethanolamine Utilization Microcompartment Shell Subunit,
Eutl Closed Form
pdb|3I87|A Chain A, Ethanolamine Utilization Microcompartment Shell Subunit,
Eutl Open Form
Length = 227
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 31 HINSLHEVLLGDKLAYLVFPP 51
+++S + LGD +AYLV PP
Sbjct: 135 YLSSTAGITLGDPMAYLVAPP 155
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 46 YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
YLV P DL + + E + + L Q+ + ++ H+ G+V RDLK
Sbjct: 105 YLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLK 153
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 126 SKKVIHRDIKPENLLLGSA 144
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 46 YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
YLV P DL + E + + L Q+ + ++ H+ G+V RDLK
Sbjct: 123 YLVMPFMQTDLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLK 171
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEARKLFRQIAETVRAC 85
+HP+I L +V+ + YLVF S DL ++ + + Q+ + + C
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 86 HAQGIVLRDLK 96
H+ ++ RDLK
Sbjct: 122 HSHRVLHRDLK 132
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRK-----RLKEAEARKLFR-QIAETV 82
H +I L++V+ + LVF DL Y+ R R E K F+ Q+ + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 83 RACHAQGIVLRDLK 96
CH I+ RDLK
Sbjct: 122 AFCHENKILHRDLK 135
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGD--LHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP + +LH+ L+ SG + ++ EAE RQ E ++ H
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 87 AQGIVLRDLKLRKFVFCNAQRS 108
IV D+K + C +++
Sbjct: 167 EHSIVHLDIKPEN-IMCETKKA 187
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G+++ +++ + E ++A + CH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAP-RGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 131 SKRVIHRDIKPENLLLGSA 149
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEARKLFRQIAETVRAC 85
+HP+I L +V+ + YLVF S DL ++ + + Q+ + + C
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 86 HAQGIVLRDLK 96
H+ ++ RDLK
Sbjct: 123 HSHRVLHRDLK 133
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G+++ +++ + E ++A + CH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAP-RGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 131 SKRVIHRDIKPENLLLGSA 149
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 63 RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
KR +A F Q+ + + H+QGIV +D+K
Sbjct: 103 EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIK 136
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEARKLFRQIAETVRAC 85
+HP+I L +V+ + YLVF S DL ++ + + Q+ + + C
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 86 HAQGIVLRDLK 96
H+ ++ RDLK
Sbjct: 121 HSHRVLHRDLK 131
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 39 LLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
L+GD+L ++V G + + R+ E + + + + + HAQG++ RD+K
Sbjct: 91 LVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 63 RKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
R+ L + + R +I + + CH+ GI+ RD+K
Sbjct: 125 RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEARKLFRQIAETVRAC 85
+HP+I L +V+ + YLVF S DL ++ + + Q+ + + C
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 86 HAQGIVLRDLK 96
H+ ++ RDLK
Sbjct: 123 HSHRVLHRDLK 133
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ R E ++A + CH
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 87 AQGIVLRDLK 96
++ ++ RD+K
Sbjct: 130 SKRVIHRDIK 139
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ R E ++A + CH
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 87 AQGIVLRDLK 96
++ ++ RD+K
Sbjct: 130 SKRVIHRDIK 139
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 39 LLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
L+GD+L ++V G + + R+ E + + + + + HAQG++ RD+K
Sbjct: 87 LVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
GDL +++ + + A +I ++ H++GIV RDLKL
Sbjct: 103 GDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKL 146
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 54 GDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLKL 97
GDL +++ + + A +I ++ H++GIV RDLKL
Sbjct: 104 GDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKL 147
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 39 LLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
L+GD+L ++V G + + R+ E + + + + + HAQG++ RD+K
Sbjct: 98 LVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 39 LLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
L+GD+L ++V G + + R+ E + + + + + HAQG++ RD+K
Sbjct: 96 LVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 53 SGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
G+L S +R+ +R A+ ++ + H++ I+ RDLK
Sbjct: 90 GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLK 133
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 123 SKRVIHRDIKPENLLLGSA 141
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 130 SKRVIHRDIKPENLLLGSA 148
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 129 SKRVIHRDIKPENLLLGSA 147
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 29 HPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQ 88
H +I L V+ + +L+F DL Y+ + + + Q+ V CH++
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 89 GIVLRDLKLRKFVFCNAQRSVGHELK 114
+ RDLK + + + S LK
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLK 177
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 39 LLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
L+G++L L+ G L V Q RL E + + + + + HAQG++ RD+K
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 46 YLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
YLV DL++ V+ + L + + L Q+ ++ H+ GI+ RDLK
Sbjct: 109 YLVTTLMGADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLK 158
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 131 SKRVIHRDIKPENLLLGSA 149
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 129 SKRVIHRDIKPENLLLGSA 147
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 39 LLGDKLAYLVFPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACHAQGIVLRDLK 96
L+GD+L ++V G + + R+ E + + + + + HAQG++ RD+K
Sbjct: 141 LVGDEL-WVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 127 SKRVIHRDIKPENLLLGSA 145
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 129 SKRVIHRDIKPENLLLGSA 147
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 125 SKRVIHRDIKPENLLLGSA 143
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 126 SKRVIHRDIKPENLLLGSA 144
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 126 SKRVIHRDIKPENLLLGSA 144
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 129 SKRVIHRDIKPENLLLGSA 147
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 129 SKRVIHRDIKPENLLLGSA 147
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 131 SKRVIHRDIKPENLLLGSA 149
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 126 SKRVIHRDIKPENLLLGSA 144
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 126 SKRVIHRDIKPENLLLGSA 144
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 128 SKRVIHRDIKPENLLLGSA 146
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 126 SKRVIHRDIKPENLLLGSA 144
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 126 SKRVIHRDIKPENLLLGSA 144
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 127 SKRVIHRDIKPENLLLGSA 145
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 129 SKRVIHRDIKPENLLLGSA 147
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 127 SKRVIHRDIKPENLLLGSA 145
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 128 SKRVIHRDIKPENLLLGSA 146
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEARKLFRQIAETVRAC 85
+HP+I L +V+ + YLVF DL +++ + + Q+ + + C
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 86 HAQGIVLRDLK 96
H+ ++ RDLK
Sbjct: 119 HSHRVLHRDLK 129
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 126 SKRVIHRDIKPENLLLGSA 144
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 131 SKRVIHRDIKPENLLLGSA 149
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRL----KEAEARKLFR 76
AH L H H+ D + C+G L + + R+ KEAE + L
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122
Query: 77 QIAETVRACHAQGIVLRDLK 96
Q+ +R H+ +V D+K
Sbjct: 123 QVGRGLRYIHSMSLVHMDIK 142
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 143 SKRVIHRDIKPENLLLGSA 161
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRL----KEAEARKLFR 76
AH L H H+ D + C+G L + + R+ KEAE + L
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 77 QIAETVRACHAQGIVLRDLK 96
Q+ +R H+ +V D+K
Sbjct: 121 QVGRGLRYIHSMSLVHMDIK 140
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRL----KEAEARKLFR 76
AH L H H+ D + C+G L + + R+ KEAE + L
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 77 QIAETVRACHAQGIVLRDLK 96
Q+ +R H+ +V D+K
Sbjct: 121 QVGRGLRYIHSMSLVHMDIK 140
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 22 AHYRLDSHPHINSLHEVLLGDKLAYLVFPPCSG-DLHSYVRQRKRL----KEAEARKLFR 76
AH L H H+ D + C+G L + + R+ KEAE + L
Sbjct: 59 AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 118
Query: 77 QIAETVRACHAQGIVLRDLK 96
Q+ +R H+ +V D+K
Sbjct: 119 QVGRGLRYIHSMSLVHMDIK 138
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 152 SKRVIHRDIKPENLLLGSA 170
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEARKLFRQIAETVRAC 85
+HP+I L +V+ + YLVF DL ++ + + Q+ + + C
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 86 HAQGIVLRDLK 96
H+ ++ RDLK
Sbjct: 123 HSHRVLHRDLK 133
>pdb|2HLJ|A Chain A, Crystal Structure Of A Putative Thioesterase (Kt2440)
From Pseudomonas Putida Kt2440 At 2.00 A Resolution
Length = 157
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 6 VVLEIMSREASGNLLSAHYRLDSHPHINSLHEVLLGDKL 44
+ L+ SR SGN L + L++H IN LHEV LG ++
Sbjct: 43 IGLDADSRGQSGNSL---FTLEAH--INYLHEVKLGTEV 76
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 28 SHPHINSLHEVLLGDKLAYLVFPPCSGDLHSYVRQR--KRLKEAEARKLFRQIAETVRAC 85
+HP+I L +V+ + YLVF DL +++ + + Q+ + + C
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 86 HAQGIVLRDLK 96
H+ ++ RDLK
Sbjct: 123 HSHRVLHRDLK 133
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 29 HPHINSLHEVLLGDKLAYLV--FPPCSGDLHSYVRQRKRLKEAEARKLFRQIAETVRACH 86
HP+I L+ YL+ + P G ++ +++ + E ++A + CH
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPL-GTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 87 AQGIVLRDLKLRKFVFCNA 105
++ ++ RD+K + +A
Sbjct: 152 SKRVIHRDIKPENLLLGSA 170
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.326 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,935,742
Number of Sequences: 62578
Number of extensions: 97839
Number of successful extensions: 840
Number of sequences better than 100.0: 357
Number of HSP's better than 100.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 502
Number of HSP's gapped (non-prelim): 358
length of query: 114
length of database: 14,973,337
effective HSP length: 77
effective length of query: 37
effective length of database: 10,154,831
effective search space: 375728747
effective search space used: 375728747
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 45 (21.9 bits)