BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14428
(583 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/390 (46%), Positives = 249/390 (63%), Gaps = 42/390 (10%)
Query: 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGD 208
P+ + F +D + KKMNLGVGAYR ++GKPYVLPSV++AE +I KNLD EY IGG
Sbjct: 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGL 73
Query: 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTW 268
A+FCK +A+LA GE+ K R VQ ISG+G+LRVG +FL+RF+ + V+ P P+W
Sbjct: 74 AEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSW 133
Query: 269 NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328
H D+ + + YRY+D KT G DF+G +EDI +PE+S+L L +HNPTGVD
Sbjct: 134 GNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPR 193
Query: 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388
+QW+++A VVK+++L+ FFDMAY G SGD DKDA+++R+F ++ +CL QS++KNMG
Sbjct: 194 PEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMG 253
Query: 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDE 448
LYGERVG F+V+ ++E +R+ SQLKILIR YSNPP++GARI IL+ P L
Sbjct: 254 LYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPDL------ 307
Query: 449 TERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKS 508
+ QW +E KGM++RI S+R +L S
Sbjct: 308 ------------------------------------RKQWLQEVKGMADRIISMRTQLVS 331
Query: 509 KILDKGSKKNWDHITNQKGMFCYTGLSASQ 538
+ +GS NW HIT+Q GMFC+TGL Q
Sbjct: 332 NLKKEGSSHNWQHITDQIGMFCFTGLKPEQ 361
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 74 KLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN 133
+ VQ ISG+G+LRVG +FL+RF+ + V+ P P+W H D+ + + YRY+D
Sbjct: 96 RFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDP 155
Query: 134 KTNGLDFAGMMEDIKPLKQQ 153
KT G DF+G +EDI + +Q
Sbjct: 156 KTCGFDFSGALEDISKIPEQ 175
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
VQ ISG+G+LRVG +FL+RF+ + V+ P P+W H D+ + + YRY+D KT G
Sbjct: 100 VQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCG 159
Query: 64 LDFAGMMEDI 73
DF+G +EDI
Sbjct: 160 FDFSGALEDI 169
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3PD6|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/390 (46%), Positives = 248/390 (63%), Gaps = 42/390 (10%)
Query: 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGD 208
P+ + F +D + KKMNLGVGAYR ++GKPYVLPSV++AE +I KNLD EY IGG
Sbjct: 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGL 73
Query: 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTW 268
A+FCK +A+LA GE+ K R VQ ISG+G+LRVG +FL+RF+ + V+ P P+W
Sbjct: 74 AEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSW 133
Query: 269 NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328
H D+ + + YRY+D KT G DF+G +EDI +PE+S+L L +HNPTGVD
Sbjct: 134 GNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPR 193
Query: 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388
+QW+++A VVK+++L+ FFDMAY G SGD DKDA+++R+F ++ +CL QS++ NMG
Sbjct: 194 PEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHFIEQGINVCLCQSYAXNMG 253
Query: 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDE 448
LYGERVG F+V+ ++E +R+ SQLKILIR YSNPP++GARI IL+ P L
Sbjct: 254 LYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPDL------ 307
Query: 449 TERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKS 508
+ QW +E KGM++RI S+R +L S
Sbjct: 308 ------------------------------------RKQWLQEVKGMADRIISMRTQLVS 331
Query: 509 KILDKGSKKNWDHITNQKGMFCYTGLSASQ 538
+ +GS NW HIT+Q GMFC+TGL Q
Sbjct: 332 NLKKEGSSHNWQHITDQIGMFCFTGLKPEQ 361
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 74 KLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN 133
+ VQ ISG+G+LRVG +FL+RF+ + V+ P P+W H D+ + + YRY+D
Sbjct: 96 RFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDP 155
Query: 134 KTNGLDFAGMMEDIKPLKQQ 153
KT G DF+G +EDI + +Q
Sbjct: 156 KTCGFDFSGALEDISKIPEQ 175
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 47/70 (67%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
VQ ISG+G+LRVG +FL+RF+ + V+ P P+W H D+ + + YRY+D KT G
Sbjct: 100 VQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCG 159
Query: 64 LDFAGMMEDI 73
DF+G +EDI
Sbjct: 160 FDFSGALEDI 169
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/390 (46%), Positives = 244/390 (62%), Gaps = 42/390 (10%)
Query: 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGD 208
P+ + F +D + KKMNLGVGAYR ++GKPYVL V++AE I K +D EY I G
Sbjct: 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGL 73
Query: 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTW 268
A F + +A+LA GE+ AFK R VQGISG+GSLRVG FL+RF+ + VY P P+W
Sbjct: 74 ADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSW 133
Query: 269 NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328
H D+ L + AYRY+D KT LDF G MEDI +PE+SI+ L +HNPTGVD
Sbjct: 134 GNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPR 193
Query: 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388
++QW++LA VVK+R+L +FDMAY G SGD ++DA++LR+F ++ + L+QS++KNMG
Sbjct: 194 QEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMG 253
Query: 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDE 448
LYGER G F+V+ ++E +R+ SQLKILIR YSNPP++GARI + IL+ P
Sbjct: 254 LYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTP-------- 305
Query: 449 TERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKS 508
+L+ +W E KGM++RI S+R +L S
Sbjct: 306 ----------------------------------ELRKEWLVEVKGMADRIISMRTQLVS 331
Query: 509 KILDKGSKKNWDHITNQKGMFCYTGLSASQ 538
+ +GS NW HIT+Q GMFC+TGL Q
Sbjct: 332 NLKKEGSSHNWQHITDQIGMFCFTGLKPEQ 361
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%)
Query: 78 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 137
VQGISG+GSLRVG FL+RF+ + VY P P+W H D+ L + AYRY+D KT
Sbjct: 100 VQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS 159
Query: 138 LDFAGMMEDIKPLKQQ 153
LDF G MEDI + ++
Sbjct: 160 LDFTGAMEDISKIPEK 175
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 47/70 (67%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
VQGISG+GSLRVG FL+RF+ + VY P P+W H D+ L + AYRY+D KT
Sbjct: 100 VQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS 159
Query: 64 LDFAGMMEDI 73
LDF G MEDI
Sbjct: 160 LDFTGAMEDI 169
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 360 bits (925), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/390 (45%), Positives = 243/390 (62%), Gaps = 42/390 (10%)
Query: 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGD 208
P+ + F +D + KKMNLGVGAYR ++GKPYVL V++AE I K +D EY I G
Sbjct: 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGL 73
Query: 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTW 268
A F + +A+LA GE+ AFK R VQGISG+GSLRVG FL+RF+ + VY P P+W
Sbjct: 74 ADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSW 133
Query: 269 NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328
H D+ L + AYRY+D KT LDF G MEDI +PE+SI+ L +HNPTGVD
Sbjct: 134 GNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPR 193
Query: 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388
++QW++LA VVK+R+L +FDMAY G SGD ++DA++LR+F ++ + L+QS++ NMG
Sbjct: 194 QEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAHNMG 253
Query: 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDE 448
LYGER G F+V+ ++E +R+ SQLKILIR YSNPP++GARI + IL+ P
Sbjct: 254 LYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTP-------- 305
Query: 449 TERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKS 508
+L+ +W E KGM++RI S+R +L S
Sbjct: 306 ----------------------------------ELRKEWLVEVKGMADRIISMRTQLVS 331
Query: 509 KILDKGSKKNWDHITNQKGMFCYTGLSASQ 538
+ +GS NW HIT+Q GMFC+TGL Q
Sbjct: 332 NLKKEGSSHNWQHITDQIGMFCFTGLKPEQ 361
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%)
Query: 78 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 137
VQGISG+GSLRVG FL+RF+ + VY P P+W H D+ L + AYRY+D KT
Sbjct: 100 VQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS 159
Query: 138 LDFAGMMEDIKPLKQQ 153
LDF G MEDI + ++
Sbjct: 160 LDFTGAMEDISKIPEK 175
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 47/70 (67%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
VQGISG+GSLRVG FL+RF+ + VY P P+W H D+ L + AYRY+D KT
Sbjct: 100 VQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS 159
Query: 64 LDFAGMMEDI 73
LDF G MEDI
Sbjct: 160 LDFTGAMEDI 169
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 305 bits (780), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 159/391 (40%), Positives = 230/391 (58%), Gaps = 48/391 (12%)
Query: 154 LKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFC 212
+ F +DP P+K+NLGVGAYR +D +P+VLP V++ E+RI + L+HEY I G A+F
Sbjct: 21 IADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFR 80
Query: 213 KLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKT----VYFPTPTW 268
A++LA G+D PA ++ R+ VQ + G+G+LR+G FL R+Y G VY +PTW
Sbjct: 81 TCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTW 140
Query: 269 NGHV-RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327
H F T ++ +YRY+D + GLD G + D++ PE SI L +HNPTG D
Sbjct: 141 ENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDP 200
Query: 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387
+ +QW+Q+A V+K+R L+PFFD AY G SG+ +KDA+++RYF E +L AQSFSKN
Sbjct: 201 TPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNF 260
Query: 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCD 447
GLY ERVG +V+ D R++SQ++ ++R +SNPP GARIV LSDP+L
Sbjct: 261 GLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPEL----- 315
Query: 448 ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELK 507
F+ +W K M++RI S+R EL+
Sbjct: 316 ---------------FH----------------------EWTGNVKTMADRILSMRSELR 338
Query: 508 SKILDKGSKKNWDHITNQKGMFCYTGLSASQ 538
+++ + W+HIT+Q GMF +TGL+ Q
Sbjct: 339 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQ 369
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 49 LNVGAYRYFDNKTNGLDFAGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKT----V 104
L + +R ++ D + +++ ++ VQ + G+G+LR+G FL R+Y G V
Sbjct: 74 LGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPV 133
Query: 105 YFPTPTWNGHV-RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 148
Y +PTW H F T ++ +YRY+D + GLD G + D++
Sbjct: 134 YVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLE 178
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKT----VYFPTPTWNGHV-RFCTDSRLNVGAYRYFD 58
VQ + G+G+LR+G FL R+Y G VY +PTW H F T ++ +YRY+D
Sbjct: 103 VQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWD 162
Query: 59 NKTNGLDFAGMMEDIKLA 76
+ GLD G + D++ A
Sbjct: 163 TEKRGLDLQGFLSDLENA 180
>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJR|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJS|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 229/391 (58%), Gaps = 48/391 (12%)
Query: 154 LKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFC 212
+ F +DP P+K+NLGVGAYR +D +P+VLP V++ E+RI + L+HEY I G A+F
Sbjct: 21 IADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFR 80
Query: 213 KLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKT----VYFPTPTW 268
A++LA G+D PA ++ R+ VQ + G+G+LR+G FL R+Y G VY +PTW
Sbjct: 81 TCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTW 140
Query: 269 NGHV-RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327
H F T ++ +YRY+D + GLD G + D++ PE SI L +HNPTG D
Sbjct: 141 ENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDP 200
Query: 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387
+ +QW+Q+A V+K+R L+PFFD AY G SG+ +KDA+++RYF E +L AQSFS N
Sbjct: 201 TPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSXNF 260
Query: 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCD 447
GLY ERVG +V+ D R++SQ++ ++R +SNPP GARIV LSDP+L
Sbjct: 261 GLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPEL----- 315
Query: 448 ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELK 507
F+ +W K M++RI S+R EL+
Sbjct: 316 ---------------FH----------------------EWTGNVKTMADRILSMRSELR 338
Query: 508 SKILDKGSKKNWDHITNQKGMFCYTGLSASQ 538
+++ + W+HIT+Q GMF +TGL+ Q
Sbjct: 339 ARLEALKTPGTWNHITDQIGMFSFTGLNPKQ 369
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 49 LNVGAYRYFDNKTNGLDFAGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKT----V 104
L + +R ++ D + +++ ++ VQ + G+G+LR+G FL R+Y G V
Sbjct: 74 LGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPV 133
Query: 105 YFPTPTWNGHV-RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 148
Y +PTW H F T ++ +YRY+D + GLD G + D++
Sbjct: 134 YVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLE 178
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKT----VYFPTPTWNGHV-RFCTDSRLNVGAYRYFD 58
VQ + G+G+LR+G FL R+Y G VY +PTW H F T ++ +YRY+D
Sbjct: 103 VQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWD 162
Query: 59 NKTNGLDFAGMMEDIKLA 76
+ GLD G + D++ A
Sbjct: 163 TEKRGLDLQGFLSDLENA 180
>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|B Chain B, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|C Chain C, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|D Chain D, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
Length = 422
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/388 (39%), Positives = 225/388 (57%), Gaps = 48/388 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFCKLA 215
F +DP P+K+NLGVGAYR +D P+VLP VK+ E++I N L+HEY I G A+F A
Sbjct: 13 FREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCA 72
Query: 216 AQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKT----VYFPTPTWNGH 271
++LA G+D PA K+ R+ VQ + G+G+LR+G FL R+Y G VY +PTW H
Sbjct: 73 SRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENH 132
Query: 272 -VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330
F ++ +YRY+D + GLD G + D++ PE SI+ L +HNPTG+D + +
Sbjct: 133 NAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPE 192
Query: 331 QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY 390
QW+Q+A V+K R L+PFFD AY G SG+ ++DA+++RYF E + AQSFSKN GLY
Sbjct: 193 QWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLY 252
Query: 391 GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETE 450
ERVG +V+ + +++SQ++ ++R +SNPP GARIV LS+P
Sbjct: 253 NERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGARIVASTLSNP---------- 302
Query: 451 RIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKI 510
+L +W K M++RI ++R EL++++
Sbjct: 303 --------------------------------ELFEEWTGNVKTMADRILTMRSELRARL 330
Query: 511 LDKGSKKNWDHITNQKGMFCYTGLSASQ 538
+ W+HIT+Q GMF +TGL+ Q
Sbjct: 331 EALKTPGTWNHITDQIGMFSFTGLNPKQ 358
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 65 DFAGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKT----VYFPTPTWNGH-VRFCT 119
D + +++ ++ VQ + G+G+LR+G FL R+Y G VY +PTW H F
Sbjct: 79 DDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSA 138
Query: 120 DSRLNVGAYRYFDNKTNGLDFAGMMEDIK 148
++ +YRY+D + GLD G + D++
Sbjct: 139 AGFKDIRSYRYWDAEKRGLDLQGFLNDLE 167
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKT----VYFPTPTWNGH-VRFCTDSRLNVGAYRYFD 58
VQ + G+G+LR+G FL R+Y G VY +PTW H F ++ +YRY+D
Sbjct: 92 VQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWD 151
Query: 59 NKTNGLDFAGMMEDIKLA 76
+ GLD G + D++ A
Sbjct: 152 AEKRGLDLQGFLNDLENA 169
>pdb|2CST|A Chain A, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
pdb|2CST|B Chain B, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
Length = 411
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 224/388 (57%), Gaps = 48/388 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIY-EKNLDHEYANIGGDAKFCKLA 215
F +D +K+NLGVGAYR ++G+P+VLP V++ E+ I + +L+HEY I G +F A
Sbjct: 23 FREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGDGSLNHEYLPILGLPEFRANA 82
Query: 216 AQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG----VKTVYFPTPTWNGH 271
+++A G+D PA R+ VQG+ G+G+LR+G FL R+Y G VY +PTW H
Sbjct: 83 SRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENH 142
Query: 272 VRFCTDSRL-NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330
D+ ++ YRY+D GLD G+++D++ PE SI L +HNPTG D + D
Sbjct: 143 NSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLDDMEKAPEFSIFILHACAHNPTGTDPTPD 202
Query: 331 QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY 390
+W+Q+A V+K+R L+PFFD AY G SG DKDA+++RYF E +L AQSFSKN GLY
Sbjct: 203 EWKQIAAVMKRRCLFPFFDSAYQGFASGSLDKDAWAVRYFVSEGFELFCAQSFSKNFGLY 262
Query: 391 GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETE 450
ERVG SV+ D +R++SQ++ ++R +SNPP GARIV L+ P+L A+ +
Sbjct: 263 NERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGARIVATTLTSPQLFAEWKDNV 322
Query: 451 RIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKI 510
+ M ++R+ +R EL+S++
Sbjct: 323 KTM------------------------------------------ADRVLLMRSELRSRL 340
Query: 511 LDKGSKKNWDHITNQKGMFCYTGLSASQ 538
G+ W+HIT+Q GMF +TGL+ Q
Sbjct: 341 ESLGTPGTWNHITDQIGMFSFTGLNPKQ 368
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 4 VQGISGSGSLRVGTAFLERFYPG----VKTVYFPTPTWNGHVRFCTDSRL-NVGAYRYFD 58
VQG+ G+G+LR+G FL R+Y G VY +PTW H D+ ++ YRY+D
Sbjct: 102 VQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWD 161
Query: 59 NKTNGLDFAGMMEDIKLA 76
GLD G+++D++ A
Sbjct: 162 AAKRGLDLQGLLDDMEKA 179
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 74 KLAIVQGISGSGSLRVGTAFLERFYPG----VKTVYFPTPTWNGHVRFCTDSRL-NVGAY 128
++ VQG+ G+G+LR+G FL R+Y G VY +PTW H D+ ++ Y
Sbjct: 98 RVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTY 157
Query: 129 RYFDNKTNGLDFAGMMEDIK 148
RY+D GLD G+++D++
Sbjct: 158 RYWDAAKRGLDLQGLLDDME 177
>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
pdb|1AAT|B Chain B, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
Length = 411
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/388 (38%), Positives = 223/388 (57%), Gaps = 48/388 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIY-EKNLDHEYANIGGDAKFCKLA 215
F +D +K+NLGVGAYR ++G+P+VLP V++ E+ I +L+HEY I G +F A
Sbjct: 23 FREDGDSRKVNLGVGAYRTDEGQPWVLPVVRKVEQLIAGNGSLNHEYLPILGLPEFRANA 82
Query: 216 AQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG----VKTVYFPTPTWNGH 271
+++A G+D PA R+ VQG+ G+G+LR+G FL R+Y G VY +PTW H
Sbjct: 83 SRIALGDDSPAIAQKRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENH 142
Query: 272 VRFCTDSRL-NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330
D+ ++ YRY+D GLD G++ D++ PE SI L +HNPTG D + D
Sbjct: 143 NSVFMDAGFKDIRTYRYWDAAKRGLDLQGLLSDMEKAPEFSIFILHACAHNPTGTDPTPD 202
Query: 331 QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY 390
+W+Q+A V+K+R L+PFFD AY G SG+ +KDA+++RYF E +L AQSFSKN GLY
Sbjct: 203 EWKQIAAVMKRRCLFPFFDSAYQGFASGNLEKDAWAVRYFVSEGFELFCAQSFSKNFGLY 262
Query: 391 GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETE 450
ERVG SV+ D +R++SQ++ ++R +SNPP GARIV L+ P+L A+ +
Sbjct: 263 NERVGNLSVVGKDEDNVQRVLSQMEKIVRTTWSNPPSQGARIVATTLTSPQLFAEWKDNV 322
Query: 451 RIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKI 510
+ M ++R+ +R EL+S++
Sbjct: 323 KTM------------------------------------------ADRVLLMRSELRSRL 340
Query: 511 LDKGSKKNWDHITNQKGMFCYTGLSASQ 538
G+ W+HIT+Q GMF +TGL+ Q
Sbjct: 341 ESLGTPGTWNHITDQIGMFSFTGLNPKQ 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 4 VQGISGSGSLRVGTAFLERFYPG----VKTVYFPTPTWNGHVRFCTDSRL-NVGAYRYFD 58
VQG+ G+G+LR+G FL R+Y G VY +PTW H D+ ++ YRY+D
Sbjct: 102 VQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTYRYWD 161
Query: 59 NKTNGLDFAGMMEDIKLA 76
GLD G++ D++ A
Sbjct: 162 AAKRGLDLQGLLSDMEKA 179
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 74 KLAIVQGISGSGSLRVGTAFLERFYPG----VKTVYFPTPTWNGHVRFCTDSRL-NVGAY 128
++ VQG+ G+G+LR+G FL R+Y G VY +PTW H D+ ++ Y
Sbjct: 98 RVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRTY 157
Query: 129 RYFDNKTNGLDFAGMMEDIK 148
RY+D GLD G++ D++
Sbjct: 158 RYWDAAKRGLDLQGLLSDME 177
>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
pdb|4EU1|B Chain B, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
Length = 409
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 207/397 (52%), Gaps = 47/397 (11%)
Query: 142 GMMEDIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHE 201
G M P+ + F DP +K+NL +G YR + +P+VL VK+A N+D
Sbjct: 20 GSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA---TLGTNMD-- 74
Query: 202 YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261
YA + G A F + A +L +G A +D R+A Q + G+G+LR+G L RF +
Sbjct: 75 YAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRI 134
Query: 262 YFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321
Y P + H + + + Y Y+D T GL+ AGM+E + PE S++ + +HN
Sbjct: 135 YGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHN 194
Query: 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQ 381
PTGVD + D WRQ+ V+K+R+ PF DMAY G +G D DAF R+ V L +AQ
Sbjct: 195 PTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQ 254
Query: 382 SFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK 441
SFS N GLYG R G + T +++E +R++SQL +LIR Y+NPP++GA +V+ IL DP
Sbjct: 255 SFSXNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDP- 313
Query: 442 LKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISS 501
+L A W +E K MS+RI+
Sbjct: 314 -----------------------------------------QLTALWKKELKQMSSRIAE 332
Query: 502 IREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQ 538
+R+ L S++ GS +W HI Q GM YTGL+ Q
Sbjct: 333 VRKRLVSELKACGSVHDWSHIERQVGMMAYTGLTREQ 369
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 70 MEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 129
+ D ++A Q + G+G+LR+G L RF +Y P + H + + + Y
Sbjct: 100 LRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYS 159
Query: 130 YFDNKTNGLDFAGMME 145
Y+D T GL+ AGM+E
Sbjct: 160 YYDPATKGLNLAGMLE 175
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 1 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK 60
+A Q + G+G+LR+G L RF +Y P + H + + + Y Y+D
Sbjct: 105 IASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPA 164
Query: 61 TNGLDFAGMME 71
T GL+ AGM+E
Sbjct: 165 TKGLNLAGMLE 175
>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|B Chain B, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|C Chain C, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|D Chain D, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
Length = 412
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 207/387 (53%), Gaps = 51/387 (13%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIY-EKNLDHEYANIGGDAKFCKLA 215
+ +D K++LG+GAYR ++GKP+VLPSVK AE+ I+ + + +HEY I G A
Sbjct: 23 YGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNA 82
Query: 216 AQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC 275
A++ +G A +++R+ VQ +SG+G+L + F +F+P K VY PTW H+
Sbjct: 83 AKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPD-KLVYLSKPTWANHMAIF 141
Query: 276 TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQL 335
+ L Y Y+ N+T LD G + I+ PE SI L + +HNPTG+D + +QW Q+
Sbjct: 142 ENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQI 201
Query: 336 AVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE---VGQLCLAQSFSKNMGLYGE 392
+ ++ FD AY G +GD DKDA+++R ++ V + + QSF+KN G+YGE
Sbjct: 202 VDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGE 261
Query: 393 RVGTFSVLTPTSDETERI----MSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDE 448
RVG F + + + I SQL +IR SNPP +GA+IV ++L P+L
Sbjct: 262 RVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPEL------ 315
Query: 449 TERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKS 508
TE QW ++ MS+RI+ +R L+
Sbjct: 316 TE------------------------------------QWHKDMVTMSSRITKMRHALRD 339
Query: 509 KILDKGSKKNWDHITNQKGMFCYTGLS 535
++ G+ NWDHI NQ GMF +TGL+
Sbjct: 340 HLVKLGTPGNWDHIVNQCGMFSFTGLT 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 70 MEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 129
+++ ++ VQ +SG+G+L + F +F+P K VY PTW H+ + L Y
Sbjct: 94 LQEDRVISVQSLSGTGALHISAKFFSKFFPD-KLVYLSKPTWANHMAIFENQGLKTATYP 152
Query: 130 YFDNKTNGLDFAGMMEDIK 148
Y+ N+T LD G + I+
Sbjct: 153 YWANETKSLDLNGFLNAIQ 171
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
VQ +SG+G+L + F +F+P K VY PTW H+ + L Y Y+ N+T
Sbjct: 102 VQSLSGTGALHISAKFFSKFFPD-KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160
Query: 64 LDFAGMMEDIKLA 76
LD G + I+ A
Sbjct: 161 LDLNGFLNAIQKA 173
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 210/412 (50%), Gaps = 50/412 (12%)
Query: 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRI-YEKNLDHEYANIGG 207
P+ ++ F +DP K+NL +G Y EDG L +V EAE R+ + + Y + G
Sbjct: 12 PILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEG 71
Query: 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT 267
+ A L +G D P K R+A +Q + GSG+L+VG FL+R++P V+ PT
Sbjct: 72 LNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPT 130
Query: 268 WNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327
W HV + V Y ++D TNG+ F ++ +K +P RSI+ L HNPTG DL
Sbjct: 131 WENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADL 190
Query: 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387
+ DQW + ++K R L PF D+AY G +G ++DA+++R A ++ SFSK
Sbjct: 191 TNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPALVSNSFSKIF 249
Query: 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCD 447
LYGERVG SV+ ++ R++ QLK +R YS+PP GA++V +L+D L
Sbjct: 250 SLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEAL----- 304
Query: 448 ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELK 507
KA W E + M RI ++R+EL
Sbjct: 305 -------------------------------------KASWLAEVEEMRTRILAMRQELV 327
Query: 508 SKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNRISSIREELKSKILDKG 559
+ + ++N+D++ NQ+GMF YTGLSA+Q + +REE ++ G
Sbjct: 328 KVLSTEMPERNFDYLLNQRGMFSYTGLSAAQ-----VDRLREEFGVYLIASG 374
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 69 MMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAY 128
+++ ++A +Q + GSG+L+VG FL+R++P V+ PTW HV + V Y
Sbjct: 90 VLKQQRVATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTY 148
Query: 129 RYFDNKTNGLDFAGMMEDIKPL 150
++D TNG+ F ++ +K L
Sbjct: 149 PWYDEATNGVRFNDLLATLKTL 170
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK 60
+A +Q + GSG+L+VG FL+R++P V+ PTW HV + V Y ++D
Sbjct: 96 VATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEA 154
Query: 61 TNGLDFAGMMEDIK 74
TNG+ F ++ +K
Sbjct: 155 TNGVRFNDLLATLK 168
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/412 (33%), Positives = 209/412 (50%), Gaps = 50/412 (12%)
Query: 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRI-YEKNLDHEYANIGG 207
P+ ++ F +DP K+NL +G Y EDG L +V EAE R+ + + Y + G
Sbjct: 12 PILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEG 71
Query: 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT 267
+ A L +G D P K R+A +Q + GSG+L+VG FL+R++P V+ PT
Sbjct: 72 LNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPT 130
Query: 268 WNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327
W HV + V Y ++D TNG+ F ++ +K + SI+ L HNPTG DL
Sbjct: 131 WENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADL 190
Query: 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387
+ DQW + ++K R L PF D+AY G +G ++DA+++R A ++ SFSK
Sbjct: 191 TNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPALVSNSFSKIF 249
Query: 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCD 447
LYGERVG SV+ ++ R++ QLK +R YS+PP GA++V +L+D LK
Sbjct: 250 SLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALK---- 305
Query: 448 ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELK 507
A W +E + M RI ++R+EL
Sbjct: 306 --------------------------------------ASWLKEVEEMRTRILAMRQELV 327
Query: 508 SKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNRISSIREELKSKILDKG 559
+ + ++N+D++ NQ+GMF YTGLSA+Q + +REE ++ G
Sbjct: 328 KVLSTEMPERNFDYLLNQRGMFSYTGLSAAQ-----VDRLREEFGVYLIASG 374
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 69 MMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAY 128
+++ ++A +Q + GSG+L+VG FL+R++P V+ PTW HV + V Y
Sbjct: 90 VLKQQRVATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTY 148
Query: 129 RYFDNKTNGLDFAGMMEDIKPLK 151
++D TNG+ F ++ +K L+
Sbjct: 149 PWYDEATNGVRFNDLLATLKTLQ 171
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 1 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK 60
+A +Q + GSG+L+VG FL+R++P V+ PTW HV + V Y ++D
Sbjct: 96 VATIQTLGGSGALKVGADFLKRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEA 154
Query: 61 TNGLDFAGMMEDIK 74
TNG+ F ++ +K
Sbjct: 155 TNGVRFNDLLATLK 168
>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
pdb|4H51|B Chain B, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
Length = 420
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 193/376 (51%), Gaps = 47/376 (12%)
Query: 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDF 224
K NL +GAYR E G+PY L V++AE+ + + NLD+EY I G F A ++ YG
Sbjct: 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGN-- 103
Query: 225 PAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKT-VYFPTPTWNGHVRFCTDSRL-NV 282
+ L VQ +SG+G++ +G L R + T +Y PTW H + N+
Sbjct: 104 -TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNI 162
Query: 283 GAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR 342
Y Y+D KT L+F GM +DI A P+ S+ L +HNPTGVD S++QW ++A ++ +
Sbjct: 163 CTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAK 222
Query: 343 HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402
H FFD AY G SG D DA++ R FA+ ++ LAQSFS NMGLY ER GT S+L
Sbjct: 223 HHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSXNMGLYSERAGTLSLLLK 282
Query: 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG 462
+ + S + LIR Y+ PP HGAR+ ILS+ +
Sbjct: 283 DKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNE--------------------- 321
Query: 463 FYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHI 522
L+ +W E M+ RI ++R + ++L + +W+H+
Sbjct: 322 ---------------------LRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHV 360
Query: 523 TNQKGMFCYTGLSASQ 538
NQ GMF + GLS +Q
Sbjct: 361 INQIGMFSFLGLSKAQ 376
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 49 LNVGAYRYFDNKTNGLDFAGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKT-VYFP 107
L + Y+ F ++ + + +E L VQ +SG+G++ +G L R + T +Y
Sbjct: 84 LPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLS 143
Query: 108 TPTWNGHVRFCTDSRL-NVGAYRYFDNKTNGLDFAGMMEDI 147
PTW H + N+ Y Y+D KT L+F GM +DI
Sbjct: 144 DPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDI 184
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 1 LAIVQGISGSGSLRVGTAFLERFYPGVKT-VYFPTPTWNGHVRFCTDSRL-NVGAYRYFD 58
L VQ +SG+G++ +G L R + T +Y PTW H + N+ Y Y+D
Sbjct: 110 LVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYD 169
Query: 59 NKTNGLDFAGMMEDIKLA 76
KT L+F GM +DI A
Sbjct: 170 PKTVSLNFEGMKKDILAA 187
>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
pdb|4F4E|B Chain B, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
Length = 420
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 209/422 (49%), Gaps = 56/422 (13%)
Query: 155 KGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKL 214
+ FN D P K+NLGVG Y EDGK +L +V++AE+ E L Y I G A +
Sbjct: 41 EAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDAS 100
Query: 215 AAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF 274
+L G+D P R+ Q + G+G+L++G FL P K V P+W H
Sbjct: 101 VQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAK-VAISDPSWENHRAL 159
Query: 275 CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQ 334
+ V AY Y+D KTNG++F GM+ + +I+ L HNPTGVDL++ QW Q
Sbjct: 160 FDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQ 219
Query: 335 LAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394
+ VVK R L PF D+AY G + DA ++R FA + ++ SFS + LYGERV
Sbjct: 220 VVEVVKARRLVPFLDIAYQGFGE-SIEADAAAVRLFAAANLNVFVSSSFSXSFSLYGERV 278
Query: 395 GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMS 454
G S++T + DE R++SQLK +IR YSNPP HG IV +L+ P
Sbjct: 279 GALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASP-------------- 324
Query: 455 QLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKG 514
+L+A W +E M +RI ++R L ++ G
Sbjct: 325 ----------------------------ELRASWVQELGEMRDRIRAMRNGLVERLKAAG 356
Query: 515 SKKNWDHITNQKGMFCYTGLSASQGMSNRISSIREELKSKILDKG-------SKKNWDHI 567
++++ I Q+GMF Y+GL+++Q + +REE + G + +N D +
Sbjct: 357 IERDFSFINAQRGMFSYSGLTSAQ-----VDRLREEFGIYAVSTGRICVAALNTRNLDVV 411
Query: 568 TN 569
N
Sbjct: 412 AN 413
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 74 KLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN 133
++ Q + G+G+L++G FL P K V P+W H + V AY Y+D
Sbjct: 117 RVVTAQALGGTGALKIGADFLRTLNPKAK-VAISDPSWENHRALFDMAGFEVVAYPYYDA 175
Query: 134 KTNGLDFAGMM 144
KTNG++F GM+
Sbjct: 176 KTNGVNFDGML 186
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGL 64
Q + G+G+L++G FL P K V P+W H + V AY Y+D KTNG+
Sbjct: 122 QALGGTGALKIGADFLRTLNPKAK-VAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGV 180
Query: 65 DFAGMM 70
+F GM+
Sbjct: 181 NFDGML 186
>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei
Length = 420
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 210/422 (49%), Gaps = 56/422 (13%)
Query: 155 KGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKL 214
+ FN D P K+NLGVG Y EDGK +L +V++AE+ E L Y I G A +
Sbjct: 41 EAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDAS 100
Query: 215 AAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF 274
+L G+D P R+ Q + G+G+L++G FL P K V P+W H
Sbjct: 101 VQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAK-VAISDPSWENHRAL 159
Query: 275 CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQ 334
+ V AY Y+D KTNG++F GM+ + +I+ L HNPTGVDL++ QW Q
Sbjct: 160 FDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQ 219
Query: 335 LAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394
+ VVK R L PF D+AY G + DA ++R FA + ++ SFSK+ LYGERV
Sbjct: 220 VVEVVKARRLVPFLDIAYQGFGE-SIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERV 278
Query: 395 GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMS 454
G S++T + DE R++SQLK +IR YSNPP HG IV +L+ P
Sbjct: 279 GALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASP-------------- 324
Query: 455 QLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKG 514
+L+A W +E M +RI ++R L ++ G
Sbjct: 325 ----------------------------ELRASWVQELGEMRDRIRAMRNGLVERLKAAG 356
Query: 515 SKKNWDHITNQKGMFCYTGLSASQGMSNRISSIREELKSKILDKG-------SKKNWDHI 567
++++ I Q+GMF Y+GL+++Q + +REE + G + +N D +
Sbjct: 357 IERDFSFINAQRGMFSYSGLTSAQ-----VDRLREEFGIYAVSTGRICVAALNTRNLDVV 411
Query: 568 TN 569
N
Sbjct: 412 AN 413
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 74 KLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN 133
++ Q + G+G+L++G FL P K V P+W H + V AY Y+D
Sbjct: 117 RVVTAQALGGTGALKIGADFLRTLNPKAK-VAISDPSWENHRALFDMAGFEVVAYPYYDA 175
Query: 134 KTNGLDFAGMM 144
KTNG++F GM+
Sbjct: 176 KTNGVNFDGML 186
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGL 64
Q + G+G+L++G FL P K V P+W H + V AY Y+D KTNG+
Sbjct: 122 QALGGTGALKIGADFLRTLNPKAK-VAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGV 180
Query: 65 DFAGMM 70
+F GM+
Sbjct: 181 NFDGML 186
>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
pdb|3MEB|B Chain B, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
Length = 448
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 203/399 (50%), Gaps = 63/399 (15%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYE--KNLDHEYANIGGDAKFCKL 214
+N D +PKK+NLGVGAYR E GKP++LP+VKEAE I + EY + G F +
Sbjct: 43 YNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEA 102
Query: 215 AAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF 274
A L +G+D A ++ R+A Q +SG+GSL +G FL + P + Y P+ TW H
Sbjct: 103 AQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAE-FYMPSTTWPNHYGI 161
Query: 275 CTD--SRLNVGAYRYFDNKTNG---LDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE 329
++L V Y + +G +DF+ +DI++ PE+SI +HNP+G+D +E
Sbjct: 162 YDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTE 221
Query: 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGL 389
QW++L ++K++ FFD AY G +G F+ DAF++R F ++ +AQSFSKN GL
Sbjct: 222 AQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGL 281
Query: 390 YGERVGTFSVL---TPTSDETERIMSQ-----LKILIRGFYSNPPIHGARIVTEILSDPK 441
YGER+G V+ S E + +S + + IR +S IHGA IV I+ D
Sbjct: 282 YGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHD-- 339
Query: 442 LKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISS 501
K L++ FY N K MS RI
Sbjct: 340 ---------------KRLLQMFYDN-------------------------VKEMSARIHR 359
Query: 502 IREELKSKILDK-----GSKKNWDHITNQKGMFCYTGLS 535
+R L + + + GSK WDHI GMF +TGL+
Sbjct: 360 MRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT 398
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 74 KLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD--SRLNVGAYRYF 131
++A Q +SG+GSL +G FL + P + Y P+ TW H ++L V Y
Sbjct: 119 RIASCQSLSGTGSLHIGFEFLHLWMPKAE-FYMPSTTWPNHYGIYDKVFNKLKVPYKEYT 177
Query: 132 DNKTNG---LDFAGMMEDIK 148
+ +G +DF+ +DI+
Sbjct: 178 YLRKDGELEIDFSNTKKDIQ 197
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 1 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD--SRLNVGAYRYFD 58
+A Q +SG+GSL +G FL + P + Y P+ TW H ++L V Y
Sbjct: 120 IASCQSLSGTGSLHIGFEFLHLWMPKAE-FYMPSTTWPNHYGIYDKVFNKLKVPYKEYTY 178
Query: 59 NKTNG---LDFAGMMEDIKLAIVQGI 81
+ +G +DF+ +DI+ A + I
Sbjct: 179 LRKDGELEIDFSNTKKDIQSAPEKSI 204
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 188/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ S HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGSCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGYCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGWCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGFCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 187/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD A+ G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAFQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSANFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSHNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 30 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 89
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 90 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 148
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 149 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 208
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 209 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGA 267
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 268 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 313
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 314 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 375
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 97 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 155
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 156 EYAYYDAENHTLDFDALINSL 176
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 108 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 166
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 167 LDFDALINSLNEA 179
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ H PTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K I YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIDANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P F AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFAFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD A G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFARQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGFYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ H PTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ H PTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD A+ G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAFQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K++LGVG Y+ E GK VL SVK+AE+ + E Y + G +F +
Sbjct: 30 FRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENETTKTYLGLDGLPEFGRCTQ 89
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRVG FL + VK V+ P+W H
Sbjct: 90 ELLFGKGSALINDKRARTAQTPGGSGALRVGADFLAK-NTSVKRVWVSNPSWPNHKAIFN 148
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 149 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 208
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P D AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 209 QLSVEKGWLPLIDFAYQGFGRG-LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGA 267
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 268 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 313
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 314 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 375
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRVG FL + VK V+ P+W H + L V
Sbjct: 97 SALINDKRARTAQTPGGSGALRVGADFLAK-NTSVKRVWVSNPSWPNHKAIFNSAGLEVR 155
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 156 EYAYYDAENHTLDFDALINSL 176
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRVG FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 108 AQTPGGSGALRVGADFLAK-NTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHT 166
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 167 LDFDALINSLNEA 179
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 185/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HN TG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNATGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENETTKLYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YS+PP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+ H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSHPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+ H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSHPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+ H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSHPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 185/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ H PTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K I YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 185/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ H PTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K I YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAILANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 185/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YS+PP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ Q GMF + GL+ Q + +REE
Sbjct: 336 RDFSFTIKQNGMFFFGGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 185/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGLYYDETGKIPVLTSVKKAEQYLLENETTKLYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YS+PP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRDNYSSPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 184/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGQGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD A G G ++DA LR FA +L +A S+SKN GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAQQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K I YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIYANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
pdb|1BQD|B Chain B, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
Length = 396
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 184/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G+G+LRV FL + VK V+ +W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNASWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HN TG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNATGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ +W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNASWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ +W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNASWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 185/392 (47%), Gaps = 49/392 (12%)
Query: 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLA 219
D P K++LG+G Y E GK VL SVK+AE+ + E Y I G +F + +L
Sbjct: 23 DERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELL 82
Query: 220 YGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSR 279
+G+ D R Q G+G+LRV FL + VK V+ P+W H +
Sbjct: 83 FGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAG 141
Query: 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339
L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA +
Sbjct: 142 LEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
Query: 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399
++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG ++
Sbjct: 202 VEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTL 260
Query: 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459
+ S+ +R SQ+K IR YS+PP HGA +V ILS+ L
Sbjct: 261 VAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILSNDAL----------------- 303
Query: 460 IRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNW 519
+A W +E M RI +R+ + + +KG+ +++
Sbjct: 304 -------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDF 338
Query: 520 DHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
I Q GMF ++GL+ Q + +REE
Sbjct: 339 SFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 184/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K++LG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKIDLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N LY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSXNFALYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R Q+K IR YS+PP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFGQMKAAIRANYSSPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 184/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K++LGVG Y+ E GK VL SVK+AE+ + E Y + G +F +
Sbjct: 30 FRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENETTKTYLGLDGLPEFGRCTQ 89
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ P+W H
Sbjct: 90 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFN 148
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG D + +QW+ LA
Sbjct: 149 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLA 208
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P D+AY G G ++DA LR FA +L +A S S N GLY ERVG
Sbjct: 209 QLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKELIVASSCSXNFGLYNERVGA 267
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YSNPP HGA +V ILS+ L
Sbjct: 268 CTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 313
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 314 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 375
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ P+W H + L V
Sbjct: 97 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFNSAGLEVR 155
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 156 EYAYYDAENHTLDFDALINSL 176
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 108 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHT 166
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 167 LDFDALINSLNEA 179
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 184/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K++LG+G Y+ E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKIDLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ P+W H
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P FD AY G G ++DA LR FA +L +A S+S N LY ERVG
Sbjct: 199 QLSVEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSXNFALYNERVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R Q+K IR YS+PP HGA +V ILS+ L
Sbjct: 258 CTLVAADSETVDRAFGQMKAAIRDNYSSPPAHGASVVATILSNDAL-------------- 303
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 304 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 184/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K++LGVG Y+ E GK V+ SVK+AE+ + E Y I G +F +
Sbjct: 30 FRADERPGKVDLGVGVYKDETGKTPVMTSVKKAEQYLLENETTKTYLGIDGIPEFGRCTQ 89
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ PTW H
Sbjct: 90 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPTWPNHKAIFN 148
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 149 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLA 208
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P D+AY G G ++DA LR FA +L +A S S N LY ERVG
Sbjct: 209 QLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKELIVASSCSXNFSLYNERVGA 267
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YS+PP HGA +V ILS+ L
Sbjct: 268 CTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATILSNDAL-------------- 313
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 314 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 375
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ PTW H + L V
Sbjct: 97 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPTWPNHKAIFNSAGLEVR 155
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 156 EYAYYDAENHTLDFDALINSL 176
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ PTW H + L V Y Y+D + +
Sbjct: 108 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHT 166
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 167 LDFDALINSLNEA 179
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 184/392 (46%), Gaps = 49/392 (12%)
Query: 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLA 219
D P K++LG+G Y E GK VL SVK+AE+ + E Y I G +F + +L
Sbjct: 23 DERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELL 82
Query: 220 YGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSR 279
+G+ D R Q G+G+LRV FL + VK V+ P W H +
Sbjct: 83 FGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPGWPTHKSVFNSAG 141
Query: 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339
L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA +
Sbjct: 142 LEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
Query: 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399
++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG ++
Sbjct: 202 VEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTL 260
Query: 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459
+ S+ +R SQ+K IR YS+PP HGA +V ILS+ L
Sbjct: 261 VAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILSNDAL----------------- 303
Query: 460 IRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNW 519
+A W +E M RI +R+ + + +KG+ +++
Sbjct: 304 -------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDF 338
Query: 520 DHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
I Q GMF ++GL+ Q + +REE
Sbjct: 339 SFIIKQNGMFSFSGLTKEQ-----VLRLREEF 365
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPGWPTHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 184/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K++LG+G Y+ E GK V+ SVK+AE+ + E Y + G +F +
Sbjct: 30 FRADERPGKVDLGIGVYKDETGKTPVMTSVKKAEQYLLENETTKTYLGLDGLPEFGRCTQ 89
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ P+W H
Sbjct: 90 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFN 148
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG D + +QW+ LA
Sbjct: 149 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLA 208
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P D AY G G ++DA LR FA +L +A S+S N GLY ERVG
Sbjct: 209 QLSVEKGWLPLIDFAYQGFGRG-LEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGA 267
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R SQ+K IR YS+PP HGA +V ILS+ L
Sbjct: 268 CTLVAADSETVDRAFSQMKAAIRANYSSPPAHGASVVATILSNDAL-------------- 313
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 314 ----------------------------RAIWEQELTDMRQRIQRLRQLFVNTLQEKGAN 345
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 375
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ P+W H + L V
Sbjct: 97 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFNSAGLEVR 155
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 156 EYAYYDAENHTLDFDALINSL 176
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 108 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHT 166
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 167 LDFDALINSLNEA 179
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 183/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K++LGVG Y+ E GK VL SVK+AE+ + E Y + G +F +
Sbjct: 30 FRADERPGKVDLGVGVYKDETGKTPVLTSVKKAEQYLLENETTKTYLGLDGLPEFGRCTQ 89
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ P+W H
Sbjct: 90 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFN 148
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG D + +QW+ LA
Sbjct: 149 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLA 208
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P D+AY G G ++DA LR FA +L +A S S N GLY ERVG
Sbjct: 209 QLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKELIVASSCSXNFGLYNERVGA 267
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R Q+K IR YSNPP HGA +V ILS+ L
Sbjct: 268 CTLVAADSETVDRAFGQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 313
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 314 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ + Q GMF ++GL+ Q + +REE
Sbjct: 346 RDFSFVIKQNGMFSFSGLTKEQ-----VLRLREEF 375
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ P+W H + L V
Sbjct: 97 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFNSAGLEVR 155
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 156 EYAYYDAENHTLDFDALINSL 176
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ P+W H + L V Y Y+D + +
Sbjct: 108 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHT 166
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 167 LDFDALINSLNEA 179
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 182/395 (46%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K++LGVG Y+ E GK V+ SVK+AE+ + E Y + G +F +
Sbjct: 30 FRADERPGKVDLGVGVYKDETGKTPVMTSVKKAEQYLLENETTKTYLGLDGLPEFGRCTQ 89
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q GSG+LRV FL + VK V+ PTW H
Sbjct: 90 ELLFGKGSALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPTWPNHKAIFN 148
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG D + +QW+ LA
Sbjct: 149 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLA 208
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P D+AY G G ++DA LR FA +L +A S S N LY ERVG
Sbjct: 209 QLSVEKGWLPLIDIAYQGFGRG-LEEDAEGLRAFAAMHKELIVASSCSXNFSLYNERVGA 267
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ S+ +R Q+K IR YSNPP HGA +V ILS+ L
Sbjct: 268 CTLVAADSETVDRAFGQMKAAIRANYSNPPAHGASVVATILSNDAL-------------- 313
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+A W +E M RI +R+ + + +KG+
Sbjct: 314 ----------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGAN 345
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q GMF ++GL+ Q + +REE
Sbjct: 346 RDFSFIIKQNGMFSFSGLTKEQ-----VLRLREEF 375
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q GSG+LRV FL + VK V+ PTW H + L V
Sbjct: 97 SALINDKRARTAQTPGGSGALRVAADFLAK-NTSVKRVWVSNPTWPNHKAIFNSAGLEVR 155
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 156 EYAYYDAENHTLDFDALINSL 176
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q GSG+LRV FL + VK V+ PTW H + L V Y Y+D + +
Sbjct: 108 AQTPGGSGALRVAADFLAK-NTSVKRVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENHT 166
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 167 LDFDALINSLNEA 179
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 183/392 (46%), Gaps = 49/392 (12%)
Query: 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLA 219
D P K++LG+G Y E GK VL SVK+AE+ + E Y I G +F + +L
Sbjct: 23 DERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELL 82
Query: 220 YGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSR 279
+G+ D R Q G+G+LRV FL + V+ V+ P+W H +
Sbjct: 83 FGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVRRVWVSNPSWPNHKSVFNSAG 141
Query: 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339
L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA +
Sbjct: 142 LEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
Query: 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399
++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVGT ++
Sbjct: 202 VEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGTCTL 260
Query: 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459
+ S+ +R SQ+K IR YS+PP HGA +V IL + L
Sbjct: 261 VAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILGNDAL----------------- 303
Query: 460 IRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNW 519
+A W +E M RI +R+ + + +KG+ +++
Sbjct: 304 -------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDF 338
Query: 520 DHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
Q GMF + GL+ Q + +REE
Sbjct: 339 SFTIKQNGMFFFGGLTKEQ-----VLRLREEF 365
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + V+ V+ P+W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVRRVWVSNPSWPNHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + V+ V+ P+W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVRRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 182/392 (46%), Gaps = 49/392 (12%)
Query: 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLA 219
D P K++LG+G Y E GK VL SVK+AE+ + E Y I G +F + +L
Sbjct: 23 DERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELL 82
Query: 220 YGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSR 279
+G+ D R Q G+G+LRV FL + VK V+ P W H +
Sbjct: 83 FGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPGWPTHKSVFNSAG 141
Query: 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339
L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA +
Sbjct: 142 LEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
Query: 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399
++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVG ++
Sbjct: 202 VEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTL 260
Query: 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459
+ S+ +R SQ+K IR YS+PP HGA +V ILS+ L
Sbjct: 261 VAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILSNDAL----------------- 303
Query: 460 IRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNW 519
+A W +E M RI +R+ + + +KG+ +++
Sbjct: 304 -------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDF 338
Query: 520 DHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
Q GMF + GL+ Q + +REE
Sbjct: 339 SFTIKQNGMFFFGGLTKEQ-----VLRLREEF 365
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + VK V+ P W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVKRVWVSNPGWPTHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + VK V+ P W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 182/392 (46%), Gaps = 49/392 (12%)
Query: 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLA 219
D P K++LG+G Y E GK VL SVK+AE+ + E Y I G +F + +L
Sbjct: 23 DERPGKIDLGMGVYNDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELL 82
Query: 220 YGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSR 279
+G+ D R Q G+G+LRV FL + V+ V+ P W H +
Sbjct: 83 FGKGSALINDKRARTAQTPGGTGALRVAADFLAK-NTSVRRVWVSNPGWPTHKSVFNSAG 141
Query: 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339
L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA +
Sbjct: 142 LEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLS 201
Query: 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399
++ P FD AY G G ++DA LR FA +L +A S+SKN GLY ERVGT ++
Sbjct: 202 VEKGWLPLFDFAYQGFARG-LEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGTCTL 260
Query: 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459
+ S+ +R SQ+K IR YS+PP HGA +V IL + L
Sbjct: 261 VAADSETVDRAFSQMKAAIRVNYSSPPAHGASVVATILGNDAL----------------- 303
Query: 460 IRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNW 519
+A W +E M RI +R+ + + +KG+ +++
Sbjct: 304 -------------------------RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDF 338
Query: 520 DHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
Q GMF + GL+ Q + +REE
Sbjct: 339 SFTIKQNGMFFFGGLTKEQ-----VLRLREEF 365
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G+G+LRV FL + V+ V+ P W H + L V
Sbjct: 87 SALINDKRARTAQTPGGTGALRVAADFLAK-NTSVRRVWVSNPGWPTHKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G+G+LRV FL + V+ V+ P W H + L V Y Y+D + +
Sbjct: 98 AQTPGGTGALRVAADFLAK-NTSVRRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 176/394 (44%), Gaps = 52/394 (13%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F DP K++LGVG Y+ G ++ +V AE+R+ E YA + G+ +F K
Sbjct: 20 FRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMG 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L G+ K A + + G+G+LR P ++ V+ PTW HV
Sbjct: 80 ELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLR-VFVSDPTWPNHVSIMN 135
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
L V YRYFD +T G+DF GM D+ A + ++ L HNPTG +L+ DQW ++A
Sbjct: 136 FMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIA 195
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
++++ P D+AY G G ++DA R A + ++ +A S SKN G+Y ER G
Sbjct: 196 SILEKTGALPLIDLAYQGFGDG-LEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGC 254
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
L + E + L R YS PP HGA+IV+ +L+ P
Sbjct: 255 LLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTP---------------- 298
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
+L+A W E + + + + +RE+L ++ D
Sbjct: 299 --------------------------ELRADWMAELEAVRSGMLRLREQLAGELRDLSGS 332
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREE 550
+ + +GMF G + Q + I+EE
Sbjct: 333 DRFGFVAEHRGMFSRLGATPEQ-----VKRIKEE 361
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 76 AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKT 135
A + + G+G+LR P ++ V+ PTW HV L V YRYFD +T
Sbjct: 93 ATLATVGGTGALRQALELARMANPDLR-VFVSDPTWPNHVSIMNFMGLPVQTYRYFDAET 151
Query: 136 NGLDFAGMMEDIKPLKQ 152
G+DF GM D+ K+
Sbjct: 152 RGVDFEGMKADLAAAKK 168
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 2 AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKT 61
A + + G+G+LR P ++ V+ PTW HV L V YRYFD +T
Sbjct: 93 ATLATVGGTGALRQALELARMANPDLR-VFVSDPTWPNHVSIMNFMGLPVQTYRYFDAET 151
Query: 62 NGLDFAGMMEDIKLA 76
G+DF GM D+ A
Sbjct: 152 RGVDFEGMKADLAAA 166
>pdb|3UAK|A Chain A, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
pdb|3UAK|B Chain B, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
Length = 406
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 176/395 (44%), Gaps = 49/395 (12%)
Query: 157 FNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA 216
F D P K+NLG+ Y E GK VL SVK+AE+ + E Y I G +F +
Sbjct: 20 FRADERPGKINLGLALYYDETGKIPVLTSVKKAEQYLLENETTKLYLGIDGIPEFGRCTQ 79
Query: 217 QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276
+L +G+ D R Q G G+LRV FL + VK V+ P+ N
Sbjct: 80 ELLFGKGSALINDKRARTAQTPGGHGALRVAADFLAK-NTSVKRVWVYNPSSNCSKSVFN 138
Query: 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336
+ L V Y Y+D + + LDF ++ + ++ HNPTG+D + +QW+ LA
Sbjct: 139 SAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFTGCCHNPTGIDPTLEQWQTLA 198
Query: 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396
+ ++ P F Y G G ++DA LR FA +L +A S+SKN GLY E VG
Sbjct: 199 QLSVEKGWLPLFTFFYQGFARG-LEEDAEGLRAFAAXHKELIVASSYSKNFGLYNESVGA 257
Query: 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456
+++ A + +R SQ
Sbjct: 258 CTLVA------------------------------------------ADSETVDRAFSQX 275
Query: 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516
K IR YS+PP HGA +V ILS+ L+A W +E RI R+ + + +KG+
Sbjct: 276 KAAIRDNYSSPPAHGASVVATILSNDALRAIWEQELTDXRQRIQRXRQLFVNTLQEKGAN 335
Query: 517 KNWDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551
+++ I Q G F ++GL+ Q + +REE
Sbjct: 336 RDFSFIIKQNGXFSFSGLTKEQ-----VLRLREEF 365
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 67 AGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 126
+ ++ D + Q G G+LRV FL + VK V+ P+ N + L V
Sbjct: 87 SALINDKRARTAQTPGGHGALRVAADFLAK-NTSVKRVWVYNPSSNCSKSVFNSAGLEVR 145
Query: 127 AYRYFDNKTNGLDFAGMMEDI 147
Y Y+D + + LDF ++ +
Sbjct: 146 EYAYYDAENHTLDFDALINSL 166
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNG 63
Q G G+LRV FL + VK V+ P+ N + L V Y Y+D + +
Sbjct: 98 AQTPGGHGALRVAADFLAK-NTSVKRVWVYNPSSNCSKSVFNSAGLEVREYAYYDAENHT 156
Query: 64 LDFAGMMEDIKLA 76
LDF ++ + A
Sbjct: 157 LDFDALINSLNEA 169
>pdb|3K7Y|A Chain A, Aspartate Aminotransferase Of Plasmodium Falciparum
Length = 405
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 146 DIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI 205
++ + + + F +D +K+NL +G +DG ++ SV A++ + E + Y
Sbjct: 12 EVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADKLVTENYKEKPYLLG 71
Query: 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPT 265
G F L L +G + +D ++ +Q I G+G++ V FL+ V+T+Y
Sbjct: 72 NGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKML--NVETLYVTN 129
Query: 266 PTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGV 325
P + HV N+ +FD +++ + D++ +P S + LQ S +NP V
Sbjct: 130 PPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSV 189
Query: 326 DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385
++ E + ++ +V + FD+AY G + ++D +R F ++ + QSFSK
Sbjct: 190 NIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSK 249
Query: 386 NMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVT 434
NM LYGER G ++ +E + + + L ++R FYS+P IH RI+
Sbjct: 250 NMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILC 298
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 70 MEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 129
+ED K+ +Q I G+G++ V FL+ V+T+Y P + HV N+
Sbjct: 93 IEDKKICTIQCIGGTGAIFVLLEFLKML--NVETLYVTNPPYINHVNMIESRGFNLKYIN 150
Query: 130 YFDNKTNGLDFAGMMEDIKPL 150
+FD +++ + D++ +
Sbjct: 151 FFDYNLIDINYDLFLNDLRNI 171
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 1 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK 60
+ +Q I G+G++ V FL+ V+T+Y P + HV N+ +FD
Sbjct: 98 ICTIQCIGGTGAIFVLLEFLKML--NVETLYVTNPPYINHVNMIESRGFNLKYINFFDYN 155
Query: 61 TNGLDFAGMMEDIK 74
+++ + D++
Sbjct: 156 LIDINYDLFLNDLR 169
>pdb|3RQ1|A Chain A, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|B Chain B, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|C Chain C, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|D Chain D, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
Length = 418
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 107/288 (37%), Gaps = 24/288 (8%)
Query: 166 MNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHE---YANIGGDAKFCKLAAQLAYGE 222
+N +GA E+G L +VKE Y D E YA I G F A + +G
Sbjct: 41 VNGTLGAIHDEEGNLVFLKTVKEE----YLSLSDSEHVGYAPIAGIPDFLCAAEKECFGN 96
Query: 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNV 282
P +A G G L + + V W + C+D+ +
Sbjct: 97 FRPEGHIRSIATAGGTGGIHHL------IHNYTEPGDEVLTADWYWGAYRVICSDTGRTL 150
Query: 283 GAYRYFD--NKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA---- 336
Y FD N N F + ++ A ++ T +NPTG + + W +
Sbjct: 151 VTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLK 210
Query: 337 --VVVKQRHLYPFFDMAYLGLTSGDFDKDAF--SLRYFAKEVGQLCLAQSFSKNMGLYGE 392
V + + ++ D+AYL + + AF + KE+ C+ S SK YG+
Sbjct: 211 DLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEI-LTCVCYSLSKGFTXYGQ 269
Query: 393 RVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDP 440
RVG ++ + + K R +SN R I++DP
Sbjct: 270 RVGAXIGISDDEEIADEFFEVNKSTSRATWSNICRPAXRTXANIVADP 317
>pdb|4EMY|A Chain A, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|B Chain B, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|C Chain C, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|D Chain D, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548
Length = 413
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 166 MNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDH--EYANIGGDAKFCKLAAQLAYGED 223
+N +G + GK LPSV + R+ E + H YA I G+ + K+ +G
Sbjct: 40 INAALGTLLDDKGKIIALPSVYD---RLDEXDRSHIASYAPIEGEKDYRKIVIDTLFG-- 94
Query: 224 FPAFKDNRLAIVQGISGSGSLRVGT-AFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNV 282
P + ++ + G+G++R ++L+ P + Y+ W + + C + N
Sbjct: 95 -PYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYY----WAPYRKICEEFGRNF 149
Query: 283 GAYRYFDNKTNGLDFAGMMEDIKAMPERSIL-------FLQTSSHNPTGVDLSEDQWRQL 335
+ +F + DFA ++ K + I + + +NPTG LS+++W ++
Sbjct: 150 KTFEFFTD-----DFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEV 204
Query: 336 AVVV------KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF--SKNM 387
+ K + + D+AYL +GD D+ F+ L + +F SK+
Sbjct: 205 ITFLKEKAEDKDKKITLIVDVAYLEF-AGDGDQQRKFFEKFSNLPRNLFVVVAFSXSKSH 263
Query: 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEI 436
YG R G ++ + + E + L R +SN I+ E+
Sbjct: 264 TAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIEL 312
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 299 GMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG 358
G D+ + I+F S +NPTG + +Q QL K+ +D AY S
Sbjct: 188 GFFPDLSTVGRTDIIFF-CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSD 246
Query: 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395
D + F + A+EV SFSK G G R+G
Sbjct: 247 DNPRSIFEIP-GAEEVAX--ETASFSKYAGFTGVRLG 280
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 299 GMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG 358
G D+ + I+F S +NPTG + +Q QL K+ +D AY S
Sbjct: 188 GFFPDLSTVGRTDIIFF-CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSD 246
Query: 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395
D + F + A+EV SFSK G G R+G
Sbjct: 247 DNPRSIFEIP-GAEEVAM--ETASFSKYAGFTGVRLG 280
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG-DFDKDAFSL---RYFAKE 373
S +NPTG L++DQ R + + + FD AY S K F + R+ A E
Sbjct: 171 SPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE 230
Query: 374 VGQLCLAQSFSKNMGLYGERVG 395
+ SFSK +G G R+G
Sbjct: 231 I------NSFSKPLGFAGIRLG 246
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 299 GMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG 358
G D+ + I+F S +NPTG + +Q QL K+ +D AY S
Sbjct: 188 GFFPDLSTVGRTDIIFF-CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSD 246
Query: 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395
D + F + A+EV SFS+ G G R+G
Sbjct: 247 DNPRSIFEIP-GAEEVAM--ETASFSQYAGFTGVRLG 280
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 54/148 (36%), Gaps = 23/148 (15%)
Query: 260 TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME---------DIKAMPER 310
T+ PT+ ++ DS + +G +F KT M D+ P
Sbjct: 158 TIAVQDPTFPAYI----DSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRT 213
Query: 311 SILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSL--- 367
++F S +NPTG S Q QL K FD AY + + +
Sbjct: 214 DVIFF-CSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGA 272
Query: 368 RYFAKEVGQLCLAQSFSKNMGLYGERVG 395
R A EV SFSK G G R+G
Sbjct: 273 REVAIEV------SSFSKFAGFTGVRLG 294
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 249 AFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308
AF+ PG + + F +P W ++ + V F +K +F +E+++ +
Sbjct: 117 AFMALLDPGDEVIVF-SPVWVSYIPQIILAGGTVNVVETFMSK----NFQPSLEEVEGLL 171
Query: 309 E-RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSL 367
++ L S +NPTGV + L + K+R+ Y D Y L D + S+
Sbjct: 172 VGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD---EFTSI 228
Query: 368 RYFAKEVGQLCLAQSFSKNMGLYGERVG 395
++ ++ FSK+ + G RVG
Sbjct: 229 LDVSEGFDRIVYINGFSKSHSMTGWRVG 256
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 299 GMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG 358
G D+ + I+F S +NPTG + +Q QL K+ +D AY S
Sbjct: 188 GFFPDLSTVGRTDIIFF-CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSD 246
Query: 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395
D + F + A+EV SFS G G R+G
Sbjct: 247 DNPRSIFEIP-GAEEVAM--ETASFSNYAGFTGVRLG 280
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 289 DNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ------R 342
D + +DF + E I A I+ S +NP+G SE+ ++L+ ++++ R
Sbjct: 154 DTEHFQIDFDALEERINAHTRGVII---NSPNNPSGTVYSEETIKKLSDLLEKKSKEIGR 210
Query: 343 HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402
++ D Y + D + + K + S+SK++ L GER+G V
Sbjct: 211 PIFIIADEPYREIVY-----DGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDE 265
Query: 403 TSDETE 408
D+ E
Sbjct: 266 VYDKAE 271
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 91/238 (38%), Gaps = 30/238 (12%)
Query: 233 AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTW-NGHVRFCTDSRLNVGAYRYFDNK 291
A+ G+S G L V T+ P W N + F T + N+ Y FD K
Sbjct: 121 ALTHGLSLVGDLFVNQD---------DTILLPEHNWGNYKLVFNTRNGANLQTYPIFD-K 170
Query: 292 TNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ-----RHLYP 346
++E +++ + ++ + +NPTG + + + +K +
Sbjct: 171 DGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIA 230
Query: 347 FFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA------QSFSKNMGLYGERVGTFSVL 400
D AY GL F +D ++ F A +K +G RVG +
Sbjct: 231 VVDDAYYGL----FYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFG 286
Query: 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCD-ETERIMSQLK 457
T E + +++K LIR S+ P+ V +L + K Q D E E+ + LK
Sbjct: 287 TSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK---QFDKEIEQNIQTLK 341
>pdb|1EU8|A Chain A, Structure Of Trehalose Maltose Binding Protein From
Thermococcus Litoralis
Length = 409
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 264 PTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPT 323
P P + GH T ++G +Y DNK +F +E F NP
Sbjct: 278 PLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSVQKG----FAMNLGWNPG 333
Query: 324 GVDLSEDQWRQLAVVVKQRHL 344
VD+ +D AVV K HL
Sbjct: 334 RVDVYDDP----AVVSKSPHL 350
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 110/281 (39%), Gaps = 45/281 (16%)
Query: 216 AQLAYGEDF---PAFKDNRLAIVQGISG-------------SGSLRVGTAFLERFYPGVK 259
A+LA +D+ PAFK + + I G +G+ F+ +
Sbjct: 77 AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 136
Query: 260 TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFA--GMMEDIKAMPERSILF--- 314
V PTP + G R R V +NG + E + +R++
Sbjct: 137 AVLIPTPYYPGFDR-DLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195
Query: 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAF-SLRYFAK- 372
L T+ NP G ++ ++ L V+ + ++ D Y G F +F S+ K
Sbjct: 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTA---FSSPSFISVMEVLKD 252
Query: 373 -------EVGQ-LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSN 424
EV Q + + S SK++GL G RVG S++ + + K+ G S+
Sbjct: 253 RNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAI-----YSNDDMVVAAATKMSSFGLVSS 307
Query: 425 PPIHGARIVTEILSDPKLKAQ--CDETERIMSQLKILIRGF 463
H +++ +LSD KL + +R+ + K L+ G
Sbjct: 308 QTQH---LLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGL 345
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 39/275 (14%)
Query: 216 AQLAYGEDF---PAFKDNRLAIVQGISG-------------SGSLRVGTAFLERFYPGVK 259
A+LA +D+ PAFK + + I G +G+ F+ +
Sbjct: 60 AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 119
Query: 260 TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFA--GMMEDIKAMPERSILF--- 314
V PTP + G R R V +NG + E + +R++
Sbjct: 120 AVLIPTPYYPGFDR-DLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 178
Query: 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAF--SLRYFAK 372
L T+ NP G ++ ++ L V+ + ++ D Y G F +F +
Sbjct: 179 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTA---FSSPSFISVMEVLKD 235
Query: 373 EVGQ-LCLAQSFS-KNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGA 430
EV Q + + S S K++GL G RVG S++ + + K+ G S+ H
Sbjct: 236 EVWQRVHVVYSLSXKDLGLPGFRVGAI-----YSNDDMVVAAATKMSSFGLVSSQTQH-- 288
Query: 431 RIVTEILSDPKLKAQ--CDETERIMSQLKILIRGF 463
+++ +LSD KL + +R+ + K L+ G
Sbjct: 289 -LLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGL 322
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 110/281 (39%), Gaps = 45/281 (16%)
Query: 216 AQLAYGEDF---PAFKDNRLAIVQGISG-------------SGSLRVGTAFLERFYPGVK 259
A+LA +D+ PAFK + + I G +G+ F+ +
Sbjct: 75 AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 134
Query: 260 TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFA--GMMEDIKAMPERSILF--- 314
V PTP + G R R V +NG + E + +R++
Sbjct: 135 AVLIPTPYYPGFDR-DLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 193
Query: 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAF-SLRYFAK- 372
L T+ NP G ++ ++ L V+ + ++ D Y G F +F S+ K
Sbjct: 194 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTA---FSSPSFISVMEVLKD 250
Query: 373 -------EVGQ-LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSN 424
EV Q + + S SK++GL G RVG S++ + + K+ G S+
Sbjct: 251 RNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAI-----YSNDDMVVAAATKMSSFGLVSS 305
Query: 425 PPIHGARIVTEILSDPKLKAQ--CDETERIMSQLKILIRGF 463
H +++ +LSD KL + +R+ + K L+ G
Sbjct: 306 QTQH---LLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGL 343
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 303 DIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY-LGLTSGDFD 361
D+ I+F S +NPTG + Q +L ++ +D AY L +++ D
Sbjct: 203 DLSKAKRTDIIFF-CSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCP 261
Query: 362 KDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395
K + + + + C SFSK G G R+G
Sbjct: 262 KTIYEIPGADEVAIETC---SFSKYAGFTGVRLG 292
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 110/281 (39%), Gaps = 45/281 (16%)
Query: 216 AQLAYGEDF---PAFKDNRLAIVQGISG-------------SGSLRVGTAFLERFYPGVK 259
A+LA +D+ PAFK + + I G +G+ F+ +
Sbjct: 77 AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 136
Query: 260 TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFA--GMMEDIKAMPERSILF--- 314
V PTP + G R R V +NG + E + +R++
Sbjct: 137 AVLIPTPYYPGFDR-DLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195
Query: 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAF-SLRYFAK- 372
L T+ NP G ++ ++ L V+ + ++ D Y G F +F S+ K
Sbjct: 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTA---FSSPSFISVMEVLKD 252
Query: 373 -------EVGQ-LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSN 424
EV Q + + S SK++GL G RVG S++ + + K+ G S+
Sbjct: 253 RNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAI-----YSNDDMVVAAATKMSSFGLVSS 307
Query: 425 PPIHGARIVTEILSDPKLKAQ--CDETERIMSQLKILIRGF 463
H +++ +LSD KL + +R+ + K L+ G
Sbjct: 308 QTQH---LLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGL 345
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDA 364
KA+ R+ L + NPTG+ E + +A + + L+ D Y L G+ +
Sbjct: 147 KALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPR-- 204
Query: 365 FSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395
LR FA E + S K + G RVG
Sbjct: 205 -RLREFAPE--RTFTVGSAGKRLEATGYRVG 232
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,627,502
Number of Sequences: 62578
Number of extensions: 837814
Number of successful extensions: 2290
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1793
Number of HSP's gapped (non-prelim): 323
length of query: 583
length of database: 14,973,337
effective HSP length: 104
effective length of query: 479
effective length of database: 8,465,225
effective search space: 4054842775
effective search space used: 4054842775
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)