Query psy14428
Match_columns 583
No_of_seqs 479 out of 2884
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 19:35:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14428.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14428hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 3.1E-54 6.6E-59 426.9 31.8 376 145-582 8-383 (396)
2 PRK09257 aromatic amino acid a 100.0 4.8E-50 1E-54 426.5 36.1 370 149-582 12-383 (396)
3 PTZ00376 aspartate aminotransf 100.0 8.4E-50 1.8E-54 425.5 36.7 348 148-537 14-361 (404)
4 COG0436 Aspartate/tyrosine/aro 100.0 1.3E-49 2.9E-54 418.4 31.3 303 163-536 28-333 (393)
5 PLN02397 aspartate transaminas 100.0 4.9E-48 1.1E-52 413.3 39.0 348 147-537 32-379 (423)
6 COG1167 ARO8 Transcriptional r 100.0 1.1E-47 2.5E-52 412.5 29.3 349 161-582 87-440 (459)
7 KOG1411|consensus 100.0 1.6E-47 3.6E-52 370.4 26.1 377 144-581 33-409 (427)
8 KOG1412|consensus 100.0 2.3E-45 5E-50 350.7 28.8 364 146-557 13-378 (410)
9 KOG0257|consensus 100.0 1.3E-45 2.7E-50 369.1 25.6 302 168-535 36-344 (420)
10 PLN02368 alanine transaminase 100.0 3.4E-44 7.3E-49 379.9 33.0 328 161-541 36-404 (407)
11 PRK06855 aminotransferase; Val 100.0 6.3E-44 1.4E-48 383.0 34.3 311 161-536 30-345 (433)
12 PLN00175 aminotransferase fami 100.0 1.3E-43 2.7E-48 378.4 32.1 297 162-535 53-350 (413)
13 PRK07366 succinyldiaminopimela 100.0 1.2E-43 2.6E-48 376.6 30.9 301 161-536 28-331 (388)
14 PRK08636 aspartate aminotransf 100.0 2E-43 4.4E-48 376.4 31.5 304 161-536 31-340 (403)
15 PRK07681 aspartate aminotransf 100.0 3.1E-43 6.7E-48 374.6 31.5 300 161-536 30-331 (399)
16 PRK06348 aspartate aminotransf 100.0 2.1E-43 4.6E-48 374.0 30.1 300 162-536 28-327 (384)
17 PLN00143 tyrosine/nicotianamin 100.0 1.7E-42 3.6E-47 369.6 35.5 316 149-479 18-343 (409)
18 PRK06207 aspartate aminotransf 100.0 1.1E-42 2.3E-47 370.7 32.9 297 162-480 38-344 (405)
19 PLN02187 rooty/superroot1 100.0 1.7E-42 3.7E-47 373.6 34.6 313 160-535 63-377 (462)
20 PRK08068 transaminase; Reviewe 100.0 1.4E-42 3.1E-47 368.4 31.0 301 161-536 30-332 (389)
21 PTZ00377 alanine aminotransfer 100.0 2.1E-42 4.6E-47 376.0 32.4 298 184-535 91-404 (481)
22 PRK09276 LL-diaminopimelate am 100.0 4.1E-42 8.9E-47 364.5 31.5 302 161-536 29-331 (385)
23 PRK06290 aspartate aminotransf 100.0 3.6E-42 7.8E-47 366.4 31.1 298 161-536 42-342 (410)
24 PRK09148 aminotransferase; Val 100.0 4.1E-42 8.9E-47 366.3 30.7 302 161-536 28-330 (405)
25 TIGR03540 DapC_direct LL-diami 100.0 6.3E-42 1.4E-46 362.8 31.7 301 161-536 27-329 (383)
26 PRK09147 succinyldiaminopimela 100.0 7.2E-42 1.6E-46 363.9 32.1 297 161-535 27-334 (396)
27 PLN02656 tyrosine transaminase 100.0 1.2E-41 2.6E-46 363.2 33.9 325 148-536 15-343 (409)
28 PLN02450 1-aminocyclopropane-1 100.0 4.9E-42 1.1E-46 370.7 31.0 306 161-536 35-366 (468)
29 PRK05942 aspartate aminotransf 100.0 8.7E-42 1.9E-46 362.9 31.6 301 161-536 33-335 (394)
30 PRK07682 hypothetical protein; 100.0 4.8E-42 1E-46 363.1 29.4 296 163-535 20-317 (378)
31 PLN02376 1-aminocyclopropane-1 100.0 8.9E-42 1.9E-46 369.9 32.0 274 199-536 87-373 (496)
32 PLN02231 alanine transaminase 100.0 2.7E-41 5.9E-46 368.1 35.4 316 160-534 126-455 (534)
33 PRK08960 hypothetical protein; 100.0 1.1E-41 2.5E-46 361.2 30.6 297 161-536 30-328 (387)
34 PLN00145 tyrosine/nicotianamin 100.0 4.8E-41 1E-45 360.0 35.3 307 162-536 51-364 (430)
35 PRK12414 putative aminotransfe 100.0 1.2E-41 2.7E-46 360.4 30.1 297 162-535 28-325 (384)
36 TIGR01264 tyr_amTase_E tyrosin 100.0 4.1E-41 8.9E-46 358.6 31.6 309 162-536 30-339 (401)
37 PRK15481 transcriptional regul 100.0 1.8E-41 3.8E-46 364.6 28.6 288 164-536 86-375 (431)
38 PRK09082 methionine aminotrans 100.0 1.5E-41 3.4E-46 360.0 27.5 297 163-535 30-327 (386)
39 PRK07683 aminotransferase A; V 100.0 6.3E-41 1.4E-45 355.3 31.9 298 162-536 27-325 (387)
40 TIGR03538 DapC_gpp succinyldia 100.0 6.8E-41 1.5E-45 356.0 31.9 297 161-535 26-333 (393)
41 PRK05839 hypothetical protein; 100.0 4.9E-41 1.1E-45 354.5 30.5 298 152-480 13-318 (374)
42 PTZ00433 tyrosine aminotransfe 100.0 8E-41 1.7E-45 357.4 31.8 311 161-536 31-348 (412)
43 PRK07590 L,L-diaminopimelate a 100.0 6.8E-41 1.5E-45 357.7 30.3 295 162-536 33-354 (409)
44 PRK08637 hypothetical protein; 100.0 5.1E-40 1.1E-44 348.5 35.9 313 163-536 3-335 (388)
45 PRK08912 hypothetical protein; 100.0 1.3E-40 2.8E-45 353.2 30.8 299 162-536 25-324 (387)
46 PLN02607 1-aminocyclopropane-1 100.0 1.6E-40 3.4E-45 356.4 31.4 306 161-536 44-373 (447)
47 PRK08175 aminotransferase; Val 100.0 1.5E-40 3.3E-45 353.5 30.5 302 161-536 27-329 (395)
48 PRK13355 bifunctional HTH-doma 100.0 2.6E-40 5.6E-45 362.6 33.1 308 161-536 144-453 (517)
49 PRK07337 aminotransferase; Val 100.0 1.2E-40 2.6E-45 353.6 29.3 297 161-536 28-326 (388)
50 PRK05957 aspartate aminotransf 100.0 4.6E-40 1E-44 349.0 32.6 348 163-553 27-385 (389)
51 TIGR03537 DapC succinyldiamino 100.0 3.8E-40 8.1E-45 344.9 31.3 292 165-536 2-297 (350)
52 PRK07309 aromatic amino acid a 100.0 7.4E-40 1.6E-44 347.6 32.5 299 163-536 30-329 (391)
53 PRK06108 aspartate aminotransf 100.0 6.7E-40 1.5E-44 347.2 30.4 301 162-536 23-325 (382)
54 PRK08361 aspartate aminotransf 100.0 8.6E-40 1.9E-44 347.3 30.5 299 163-536 33-332 (391)
55 PRK06107 aspartate aminotransf 100.0 1.2E-39 2.6E-44 347.3 31.5 300 161-535 31-333 (402)
56 PRK07550 hypothetical protein; 100.0 1.4E-39 3E-44 345.2 31.8 301 161-536 27-328 (386)
57 PRK07777 aminotransferase; Val 100.0 5.8E-39 1.2E-43 340.6 31.6 298 162-535 23-323 (387)
58 PRK07324 transaminase; Validat 100.0 2.8E-39 6.1E-44 340.8 28.8 291 161-536 24-315 (373)
59 PRK02610 histidinol-phosphate 100.0 8.4E-39 1.8E-43 337.5 32.0 286 163-480 28-323 (374)
60 PRK09440 avtA valine--pyruvate 100.0 1.4E-39 3.1E-44 348.5 26.3 304 161-536 28-347 (416)
61 PRK08363 alanine aminotransfer 100.0 1.2E-38 2.7E-43 339.2 31.3 303 161-536 28-335 (398)
62 TIGR01265 tyr_nico_aTase tyros 100.0 1.7E-38 3.7E-43 338.5 31.9 324 148-536 14-341 (403)
63 PRK09265 aminotransferase AlaT 100.0 2.3E-38 5.1E-43 337.7 32.8 308 161-536 31-340 (404)
64 PRK09275 aspartate aminotransf 100.0 5.5E-39 1.2E-43 345.5 27.7 302 164-536 101-444 (527)
65 PF00155 Aminotran_1_2: Aminot 100.0 4.2E-39 9.1E-44 338.7 24.4 308 164-537 2-315 (363)
66 TIGR03542 DAPAT_plant LL-diami 100.0 3.5E-38 7.6E-43 336.0 29.1 288 161-480 31-347 (402)
67 KOG0256|consensus 100.0 5.4E-38 1.2E-42 311.2 28.1 317 199-582 114-446 (471)
68 PRK07865 N-succinyldiaminopime 100.0 5.2E-38 1.1E-42 330.5 29.2 285 161-535 25-313 (364)
69 COG1168 MalY Bifunctional PLP- 100.0 1.7E-37 3.6E-42 307.9 30.9 306 161-540 23-332 (388)
70 PRK07568 aspartate aminotransf 100.0 1.2E-37 2.7E-42 331.6 32.4 297 163-536 30-328 (397)
71 PRK01533 histidinol-phosphate 100.0 4.7E-38 1E-42 330.2 24.8 280 162-479 28-309 (366)
72 TIGR03539 DapC_actino succinyl 100.0 2.1E-37 4.5E-42 324.9 29.6 287 160-536 18-308 (357)
73 PRK05764 aspartate aminotransf 100.0 4.1E-37 8.8E-42 327.2 30.6 300 162-536 30-331 (393)
74 PRK06358 threonine-phosphate d 100.0 6.1E-37 1.3E-41 320.9 30.7 284 163-536 19-303 (354)
75 PRK06836 aspartate aminotransf 100.0 7.9E-37 1.7E-41 324.7 31.9 257 162-439 32-298 (394)
76 KOG0259|consensus 100.0 2.5E-36 5.5E-41 296.8 31.5 314 162-539 60-376 (447)
77 TIGR03801 asp_4_decarbox aspar 100.0 9.1E-37 2E-41 327.9 30.2 356 164-551 95-514 (521)
78 PRK03317 histidinol-phosphate 100.0 9.3E-37 2E-41 321.5 28.7 245 164-439 27-273 (368)
79 PRK14809 histidinol-phosphate 100.0 1.2E-36 2.5E-41 319.5 27.5 277 161-479 28-306 (357)
80 PRK05166 histidinol-phosphate 100.0 5.2E-36 1.1E-40 316.0 29.0 285 162-535 35-319 (371)
81 PRK07392 threonine-phosphate d 100.0 9.3E-36 2E-40 312.9 29.6 277 162-479 21-304 (360)
82 KOG0634|consensus 100.0 8.2E-36 1.8E-40 298.2 27.0 277 199-535 93-394 (472)
83 PRK08153 histidinol-phosphate 100.0 1.3E-35 2.9E-40 312.5 30.3 239 161-439 30-268 (369)
84 PLN02672 methionine S-methyltr 100.0 2.4E-35 5.2E-40 334.8 31.1 304 161-534 695-1006(1082)
85 PRK03158 histidinol-phosphate 100.0 1.5E-35 3.2E-40 311.4 27.2 239 164-440 30-268 (359)
86 PLN03026 histidinol-phosphate 100.0 3.8E-35 8.2E-40 310.1 29.7 279 162-536 51-329 (380)
87 PRK09105 putative aminotransfe 100.0 3.3E-35 7.2E-40 309.2 28.8 276 163-534 43-318 (370)
88 PRK05387 histidinol-phosphate 100.0 3.1E-35 6.8E-40 308.2 28.4 276 163-535 24-300 (353)
89 PRK14808 histidinol-phosphate 100.0 1.1E-34 2.4E-39 301.3 29.1 230 162-439 18-247 (335)
90 PRK14807 histidinol-phosphate 100.0 5.5E-35 1.2E-39 305.9 27.0 277 163-479 22-300 (351)
91 PRK08056 threonine-phosphate d 100.0 1.8E-34 3.9E-39 302.6 31.0 283 162-536 19-302 (356)
92 PRK04870 histidinol-phosphate 100.0 1.7E-34 3.6E-39 303.0 30.6 281 162-535 25-305 (356)
93 COG0079 HisC Histidinol-phosph 100.0 1.2E-34 2.6E-39 299.9 26.7 276 164-480 23-301 (356)
94 PRK04781 histidinol-phosphate 100.0 2.6E-34 5.5E-39 302.1 28.1 257 199-535 53-311 (364)
95 PRK03967 histidinol-phosphate 100.0 1.8E-34 3.9E-39 300.2 26.3 269 163-478 18-287 (337)
96 PRK07908 hypothetical protein; 100.0 9.1E-34 2E-38 296.6 29.4 276 161-536 20-295 (349)
97 PRK06425 histidinol-phosphate 100.0 4.8E-34 1E-38 296.4 25.8 246 200-535 35-280 (332)
98 PRK06225 aspartate aminotransf 100.0 1.9E-33 4E-38 297.6 28.6 244 162-439 27-271 (380)
99 PRK03321 putative aminotransfe 100.0 4.9E-34 1.1E-38 299.0 23.8 280 163-479 22-303 (352)
100 PRK01688 histidinol-phosphate 100.0 8.7E-34 1.9E-38 296.7 21.6 247 199-479 51-304 (351)
101 PRK02731 histidinol-phosphate 100.0 1.3E-32 2.8E-37 289.9 29.7 240 162-439 31-270 (367)
102 PRK05664 threonine-phosphate d 100.0 9.1E-33 2E-37 286.6 27.3 191 202-439 47-237 (330)
103 PRK04635 histidinol-phosphate 100.0 2.7E-33 5.8E-38 293.5 21.0 268 163-479 31-304 (354)
104 TIGR01141 hisC histidinol-phos 100.0 4.5E-32 9.7E-37 283.5 27.9 282 162-536 18-299 (346)
105 PRK08354 putative aminotransfe 100.0 2.3E-32 4.9E-37 281.3 25.0 253 163-478 8-260 (311)
106 PRK06959 putative threonine-ph 100.0 6.1E-32 1.3E-36 281.1 25.7 222 163-441 24-245 (339)
107 PRK00950 histidinol-phosphate 100.0 1.3E-31 2.9E-36 281.5 28.1 272 163-478 34-306 (361)
108 TIGR01140 L_thr_O3P_dcar L-thr 100.0 4.6E-31 1E-35 273.8 27.2 280 149-536 4-283 (330)
109 COG1448 TyrB Aspartate/tyrosin 100.0 2.4E-29 5.1E-34 250.0 21.7 143 28-174 5-195 (396)
110 COG3977 Alanine-alpha-ketoisov 100.0 2.5E-27 5.4E-32 226.3 21.9 353 148-578 14-393 (417)
111 cd00609 AAT_like Aspartate ami 99.9 2.7E-25 5.8E-30 231.7 30.9 296 166-536 1-298 (350)
112 KOG0258|consensus 99.9 1.4E-25 3E-30 221.5 25.6 307 182-540 88-408 (475)
113 PRK13238 tnaA tryptophanase/L- 99.9 8.7E-26 1.9E-30 242.5 26.0 295 160-535 33-353 (460)
114 KOG0633|consensus 99.9 1.5E-24 3.3E-29 203.5 13.1 242 208-480 71-320 (375)
115 cd00617 Tnase_like Tryptophana 99.9 4E-23 8.8E-28 218.9 24.1 227 160-416 8-258 (431)
116 KOG1411|consensus 99.9 8.6E-26 1.9E-30 219.7 2.7 141 29-173 32-220 (427)
117 PRK10534 L-threonine aldolase; 99.9 3.1E-22 6.8E-27 208.1 24.2 271 166-479 2-283 (333)
118 PRK07049 methionine gamma-lyas 99.9 8.1E-22 1.8E-26 210.4 23.9 199 204-439 81-289 (427)
119 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.4E-20 3.1E-25 195.6 28.5 246 184-479 36-288 (346)
120 TIGR00858 bioF 8-amino-7-oxono 99.9 1.7E-20 3.6E-25 196.8 29.3 220 161-418 14-240 (360)
121 PRK06939 2-amino-3-ketobutyrat 99.9 7.7E-21 1.7E-25 202.3 26.9 222 161-418 40-268 (397)
122 PRK02627 acetylornithine amino 99.9 1.1E-20 2.3E-25 201.3 25.2 248 161-438 37-296 (396)
123 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.8E-20 6.1E-25 197.3 26.8 242 161-437 31-277 (385)
124 TIGR00707 argD acetylornithine 99.9 3.3E-20 7.2E-25 196.3 26.8 285 162-479 26-330 (379)
125 cd06502 TA_like Low-specificit 99.9 1.9E-20 4E-25 195.0 23.8 264 182-478 10-283 (338)
126 PF12897 Aminotran_MocR: Alani 99.9 3.6E-20 7.9E-25 185.0 23.9 303 199-568 61-385 (425)
127 PLN02721 threonine aldolase 99.9 4.7E-20 1E-24 193.1 25.7 219 164-421 6-235 (353)
128 TIGR01822 2am3keto_CoA 2-amino 99.9 1.2E-19 2.6E-24 193.1 28.3 217 161-417 36-263 (393)
129 KOG1412|consensus 99.9 3.3E-22 7.2E-27 192.2 5.4 76 1-77 100-176 (410)
130 PLN02242 methionine gamma-lyas 99.8 1E-19 2.2E-24 193.6 23.2 195 204-443 74-277 (418)
131 PRK05958 8-amino-7-oxononanoat 99.8 9.3E-19 2E-23 185.5 30.2 280 161-478 37-326 (385)
132 PRK06234 methionine gamma-lyas 99.8 4E-19 8.8E-24 188.7 24.6 194 202-439 58-262 (400)
133 PRK03244 argD acetylornithine 99.8 9.5E-19 2.1E-23 186.5 23.5 279 161-479 41-342 (398)
134 cd00378 SHMT Serine-glycine hy 99.8 1.9E-18 4.2E-23 184.3 25.9 284 163-536 19-318 (402)
135 PLN02822 serine palmitoyltrans 99.8 1.2E-18 2.6E-23 188.9 24.3 283 161-535 107-406 (481)
136 PRK08247 cystathionine gamma-s 99.8 3.2E-18 6.9E-23 179.9 25.6 191 204-438 50-245 (366)
137 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.1E-17 2.3E-22 176.6 29.0 178 208-419 53-234 (370)
138 cd06454 KBL_like KBL_like; thi 99.8 7.7E-18 1.7E-22 176.0 26.4 198 184-417 18-224 (349)
139 PRK01278 argD acetylornithine 99.8 4.8E-18 1E-22 180.5 25.1 263 161-452 29-306 (389)
140 PRK08088 4-aminobutyrate amino 99.8 5.1E-18 1.1E-22 182.1 25.5 294 161-480 39-361 (425)
141 PLN02483 serine palmitoyltrans 99.8 4.4E-18 9.6E-23 184.9 25.1 223 162-419 99-335 (489)
142 TIGR02080 O_succ_thio_ly O-suc 99.8 2.8E-18 6.1E-23 180.9 22.8 210 204-456 49-265 (382)
143 cd00610 OAT_like Acetyl ornith 99.8 4.5E-18 9.8E-23 182.1 24.4 294 162-480 35-355 (413)
144 PRK06460 hypothetical protein; 99.8 3.5E-18 7.6E-23 180.0 22.1 182 204-429 43-229 (376)
145 TIGR03392 FeS_syn_CsdA cystein 99.8 6.8E-18 1.5E-22 179.9 24.6 200 182-415 28-240 (398)
146 PRK08133 O-succinylhomoserine 99.8 6.3E-18 1.4E-22 179.0 23.7 189 207-438 62-254 (390)
147 PRK13392 5-aminolevulinate syn 99.8 3.8E-17 8.3E-22 174.8 28.2 238 164-439 47-294 (410)
148 PRK08045 cystathionine gamma-s 99.8 1E-17 2.2E-22 176.8 23.2 210 204-456 50-266 (386)
149 PRK08249 cystathionine gamma-s 99.8 1.1E-17 2.4E-22 177.3 23.3 193 204-439 62-258 (398)
150 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 2.1E-17 4.5E-22 173.8 25.0 176 208-418 46-226 (361)
151 cd00613 GDC-P Glycine cleavage 99.8 1.4E-17 3E-22 177.4 23.6 211 164-414 21-246 (398)
152 PRK07503 methionine gamma-lyas 99.8 1.2E-17 2.7E-22 177.4 22.0 210 204-457 63-281 (403)
153 PRK06767 methionine gamma-lyas 99.8 1.6E-16 3.4E-21 168.2 27.5 190 204-437 59-254 (386)
154 PRK07811 cystathionine gamma-s 99.8 3.2E-17 6.9E-22 173.4 21.9 193 204-439 59-256 (388)
155 PRK10874 cysteine sulfinate de 99.8 8.6E-17 1.9E-21 171.6 25.3 200 182-415 31-243 (401)
156 PRK02936 argD acetylornithine 99.8 1.5E-16 3.2E-21 168.4 26.6 248 161-439 27-282 (377)
157 TIGR00713 hemL glutamate-1-sem 99.8 3.3E-17 7.1E-22 176.0 21.6 248 161-438 46-311 (423)
158 PRK07504 O-succinylhomoserine 99.8 4E-17 8.7E-22 173.2 21.8 209 205-456 64-279 (398)
159 TIGR01979 sufS cysteine desulf 99.8 3.5E-16 7.6E-21 167.0 28.0 199 182-414 30-241 (403)
160 PRK08776 cystathionine gamma-s 99.8 6.4E-17 1.4E-21 171.7 22.0 189 208-439 62-255 (405)
161 PRK05093 argD bifunctional N-s 99.8 2E-16 4.4E-21 168.7 26.0 283 161-480 38-346 (403)
162 PRK07050 cystathionine beta-ly 99.8 1.1E-16 2.4E-21 169.5 23.8 208 204-454 63-277 (394)
163 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.6E-16 3.5E-21 167.3 24.6 192 184-419 11-208 (376)
164 cd00614 CGS_like CGS_like: Cys 99.8 1E-16 2.3E-21 168.8 23.1 210 204-456 38-254 (369)
165 TIGR01976 am_tr_V_VC1184 cyste 99.8 1.2E-16 2.7E-21 170.2 23.8 201 182-417 29-240 (397)
166 PRK08861 cystathionine gamma-s 99.7 1.2E-16 2.6E-21 168.2 22.7 212 204-458 51-269 (388)
167 PRK02948 cysteine desulfurase; 99.7 1E-16 2.3E-21 169.8 22.2 189 182-399 12-212 (381)
168 PRK08574 cystathionine gamma-s 99.7 1.7E-16 3.7E-21 167.6 22.9 192 204-439 51-247 (385)
169 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 1.2E-16 2.5E-21 170.8 22.0 187 205-437 56-246 (418)
170 TIGR01325 O_suc_HS_sulf O-succ 99.7 2E-16 4.3E-21 167.1 23.5 190 205-438 53-247 (380)
171 PRK07810 O-succinylhomoserine 99.7 2.1E-16 4.6E-21 167.7 23.3 210 204-456 68-284 (403)
172 PRK07582 cystathionine gamma-l 99.7 1.9E-16 4.1E-21 166.4 22.1 208 203-457 48-262 (366)
173 PRK07179 hypothetical protein; 99.7 1.5E-15 3.2E-20 162.4 28.9 216 161-418 52-274 (407)
174 TIGR01328 met_gam_lyase methio 99.7 2.9E-16 6.2E-21 166.3 22.5 190 206-438 59-254 (391)
175 PRK04073 rocD ornithine--oxo-a 99.7 1E-15 2.3E-20 162.9 26.5 282 161-478 38-345 (396)
176 PRK09295 bifunctional cysteine 99.7 4.5E-16 9.7E-21 166.3 23.6 199 182-414 35-246 (406)
177 cd06453 SufS_like Cysteine des 99.7 3E-16 6.5E-21 165.7 21.7 200 180-416 9-223 (373)
178 cd06450 DOPA_deC_like DOPA dec 99.7 1E-16 2.3E-21 167.3 17.3 239 183-461 12-265 (345)
179 PLN02409 serine--glyoxylate am 99.7 1.4E-15 3E-20 162.1 25.1 203 182-417 20-225 (401)
180 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 3.4E-15 7.4E-20 156.4 27.2 197 182-415 10-209 (355)
181 PRK11658 UDP-4-amino-4-deoxy-L 99.7 1.8E-15 3.9E-20 160.0 25.1 191 184-417 14-206 (379)
182 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 1.1E-15 2.4E-20 161.5 23.3 174 207-418 28-206 (375)
183 TIGR01437 selA_rel uncharacter 99.7 1.4E-15 3.1E-20 159.6 24.0 193 176-416 19-231 (363)
184 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 1.5E-15 3.3E-20 161.1 24.3 202 182-417 32-244 (387)
185 TIGR03403 nifS_epsilon cystein 99.7 1.9E-15 4.1E-20 160.2 23.5 195 180-399 9-214 (382)
186 PRK12381 bifunctional succinyl 99.7 5E-15 1.1E-19 158.1 26.5 238 161-437 37-296 (406)
187 cd06451 AGAT_like Alanine-glyo 99.7 1.1E-15 2.4E-20 160.3 21.2 197 180-415 8-208 (356)
188 PLN02855 Bifunctional selenocy 99.7 2.2E-15 4.7E-20 162.0 23.8 200 182-415 44-256 (424)
189 PRK04260 acetylornithine amino 99.7 6E-15 1.3E-19 155.9 25.6 281 161-478 27-325 (375)
190 PRK09028 cystathionine beta-ly 99.7 2.5E-15 5.4E-20 158.1 21.7 214 200-457 53-275 (394)
191 PRK09064 5-aminolevulinate syn 99.7 1.4E-14 3.1E-19 154.8 27.8 237 163-437 46-292 (407)
192 PRK05939 hypothetical protein; 99.7 7.1E-15 1.5E-19 155.7 23.3 216 201-457 40-282 (397)
193 TIGR01821 5aminolev_synth 5-am 99.7 1.6E-14 3.4E-19 154.3 26.0 236 163-438 45-292 (402)
194 PRK00011 glyA serine hydroxyme 99.7 6.8E-15 1.5E-19 157.8 23.4 215 162-419 24-254 (416)
195 PRK07269 cystathionine gamma-s 99.7 7.3E-15 1.6E-19 153.9 22.7 192 204-437 52-244 (364)
196 cd00615 Orn_deC_like Ornithine 99.7 1.8E-15 3.8E-20 154.5 17.5 170 204-399 57-232 (294)
197 PRK13479 2-aminoethylphosphona 99.7 2.1E-14 4.5E-19 151.5 25.5 177 207-417 38-217 (368)
198 PRK08248 O-acetylhomoserine am 99.7 1.1E-14 2.4E-19 155.6 23.1 215 207-458 65-312 (431)
199 TIGR01324 cysta_beta_ly_B cyst 99.7 2E-14 4.4E-19 151.2 24.1 212 200-456 42-263 (377)
200 PRK00854 rocD ornithine--oxo-a 99.7 3.3E-14 7.1E-19 151.7 26.1 241 162-438 40-302 (401)
201 PRK00451 glycine dehydrogenase 99.7 5.1E-15 1.1E-19 160.2 20.0 208 164-414 69-290 (447)
202 PRK06702 O-acetylhomoserine am 99.6 5.8E-15 1.2E-19 156.8 19.5 209 207-457 62-308 (432)
203 TIGR01329 cysta_beta_ly_E cyst 99.6 1.7E-14 3.7E-19 152.2 22.7 213 200-456 39-260 (378)
204 PRK08064 cystathionine beta-ly 99.6 1.7E-14 3.6E-19 152.9 22.1 201 208-452 56-263 (390)
205 PRK07671 cystathionine beta-ly 99.6 2.7E-14 5.9E-19 150.5 23.5 188 207-438 51-243 (377)
206 PRK09792 4-aminobutyrate trans 99.6 1E-13 2.2E-18 148.3 27.7 296 161-480 38-360 (421)
207 PRK06084 O-acetylhomoserine am 99.6 2.1E-14 4.5E-19 153.4 22.0 157 206-399 58-218 (425)
208 PLN00144 acetylornithine trans 99.6 5.3E-14 1.1E-18 148.7 24.1 282 161-478 13-327 (382)
209 PLN02509 cystathionine beta-ly 99.6 5.8E-14 1.3E-18 150.5 23.2 217 199-457 124-347 (464)
210 PLN03227 serine palmitoyltrans 99.6 8.4E-14 1.8E-18 147.7 23.4 222 184-437 15-254 (392)
211 TIGR02326 transamin_PhnW 2-ami 99.6 1.9E-13 4.2E-18 143.8 25.8 173 209-415 38-213 (363)
212 PRK05968 hypothetical protein; 99.6 7.4E-14 1.6E-18 147.9 22.6 205 208-457 65-277 (389)
213 cd01494 AAT_I Aspartate aminot 99.6 2.1E-14 4.5E-19 133.2 16.1 165 209-399 3-169 (170)
214 TIGR03235 DNA_S_dndA cysteine 99.6 9.2E-14 2E-18 145.7 22.3 190 182-399 10-212 (353)
215 PRK06918 4-aminobutyrate amino 99.6 6.5E-13 1.4E-17 143.6 28.8 271 161-454 52-352 (451)
216 PTZ00125 ornithine aminotransf 99.6 7.1E-13 1.5E-17 141.4 28.0 254 162-449 30-307 (400)
217 PRK05967 cystathionine beta-ly 99.6 1.8E-13 3.9E-18 143.9 22.5 214 200-458 56-279 (395)
218 PRK13393 5-aminolevulinate syn 99.6 8.5E-13 1.8E-17 141.1 27.7 238 163-438 45-292 (406)
219 PRK06176 cystathionine gamma-s 99.6 1.7E-13 3.6E-18 144.6 21.8 187 208-438 52-243 (380)
220 PRK07505 hypothetical protein; 99.6 3.7E-13 7.9E-18 143.7 24.4 240 161-438 44-297 (402)
221 TIGR02006 IscS cysteine desulf 99.6 3.9E-13 8.5E-18 143.5 24.6 190 182-399 15-216 (402)
222 TIGR03402 FeS_nifS cysteine de 99.6 2.3E-13 5E-18 144.1 20.9 188 182-399 11-210 (379)
223 TIGR03588 PseC UDP-4-keto-6-de 99.6 1.5E-12 3.1E-17 138.0 26.7 195 184-417 10-209 (380)
224 TIGR03531 selenium_SpcS O-phos 99.6 6.8E-13 1.5E-17 140.9 23.8 200 230-453 124-334 (444)
225 PRK14012 cysteine desulfurase; 99.6 2.3E-13 5E-18 145.4 20.1 190 182-399 15-218 (404)
226 TIGR00700 GABAtrnsam 4-aminobu 99.5 2.2E-12 4.7E-17 138.3 27.6 296 161-479 31-358 (420)
227 TIGR01977 am_tr_V_EF2568 cyste 99.5 4E-13 8.7E-18 142.0 21.2 189 182-399 12-212 (376)
228 TIGR03812 tyr_de_CO2_Arch tyro 99.5 9.6E-13 2.1E-17 139.0 23.8 182 209-415 62-248 (373)
229 PRK13520 L-tyrosine decarboxyl 99.5 1.1E-12 2.4E-17 138.4 24.1 206 182-415 32-243 (371)
230 PRK08360 4-aminobutyrate amino 99.5 2.7E-12 5.8E-17 138.0 25.3 254 161-438 39-318 (443)
231 PRK04366 glycine dehydrogenase 99.5 7E-13 1.5E-17 144.2 20.3 206 168-399 73-289 (481)
232 PRK04612 argD acetylornithine 99.5 2.9E-12 6.3E-17 136.4 23.7 249 161-438 38-301 (408)
233 PRK15407 lipopolysaccharide bi 99.5 6.3E-12 1.4E-16 134.9 26.3 172 208-417 65-245 (438)
234 PRK05994 O-acetylhomoserine am 99.5 2.4E-12 5.3E-17 137.8 22.7 155 208-399 65-223 (427)
235 PLN02624 ornithine-delta-amino 99.5 8.1E-12 1.8E-16 135.6 26.6 245 161-438 73-339 (474)
236 TIGR01885 Orn_aminotrans ornit 99.5 9.3E-12 2E-16 132.9 26.2 245 161-438 35-301 (401)
237 PRK00062 glutamate-1-semialdeh 99.5 2.6E-12 5.6E-17 137.9 21.4 243 161-438 48-313 (426)
238 TIGR03246 arg_catab_astC succi 99.5 7E-12 1.5E-16 133.5 23.6 241 161-438 33-293 (397)
239 PLN02651 cysteine desulfurase 99.5 6E-12 1.3E-16 132.6 22.7 190 182-399 11-212 (364)
240 cd00616 AHBA_syn 3-amino-5-hyd 99.5 9.9E-12 2.1E-16 130.1 24.0 176 202-417 14-192 (352)
241 PRK07495 4-aminobutyrate amino 99.4 9.8E-12 2.1E-16 133.1 21.8 295 161-480 38-360 (425)
242 PRK06777 4-aminobutyrate amino 99.4 3.9E-11 8.4E-16 128.6 23.8 254 161-438 38-312 (421)
243 PLN02955 8-amino-7-oxononanoat 99.4 2.3E-10 5E-15 121.8 28.8 223 163-421 102-345 (476)
244 PRK08134 O-acetylhomoserine am 99.4 4.8E-11 1E-15 127.7 22.1 155 208-399 66-224 (433)
245 PRK07812 O-acetylhomoserine am 99.3 8.4E-11 1.8E-15 125.8 21.9 213 208-458 71-316 (436)
246 COG0399 WecE Predicted pyridox 99.3 1.7E-10 3.7E-15 119.1 21.2 192 184-418 15-209 (374)
247 PRK08117 4-aminobutyrate amino 99.3 5.2E-10 1.1E-14 120.5 25.5 252 161-438 41-321 (433)
248 TIGR02618 tyr_phenol_ly tyrosi 99.3 3.1E-10 6.8E-15 119.2 22.9 191 201-418 66-278 (450)
249 TIGR02407 ectoine_ectB diamino 99.3 9.6E-10 2.1E-14 117.5 27.2 297 161-480 33-358 (412)
250 PRK08114 cystathionine beta-ly 99.3 2.4E-10 5.2E-15 120.3 22.0 208 207-458 63-279 (395)
251 PF01053 Cys_Met_Meta_PP: Cys/ 99.3 4.2E-10 9.1E-15 118.2 22.8 209 208-458 57-273 (386)
252 PRK05937 8-amino-7-oxononanoat 99.3 7.9E-10 1.7E-14 116.7 23.2 204 164-393 5-220 (370)
253 PF01041 DegT_DnrJ_EryC1: DegT 99.3 4.4E-10 9.5E-15 118.3 20.4 191 185-418 6-200 (363)
254 COG0156 BioF 7-keto-8-aminopel 99.3 2.5E-09 5.4E-14 111.4 25.5 217 162-421 38-268 (388)
255 PRK09264 diaminobutyrate--2-ox 99.2 5.6E-09 1.2E-13 112.1 29.1 271 161-453 37-331 (425)
256 COG0520 csdA Selenocysteine ly 99.2 7.6E-10 1.6E-14 117.1 21.9 173 207-414 67-245 (405)
257 PRK05613 O-acetylhomoserine am 99.2 1.6E-09 3.5E-14 115.9 24.5 215 208-458 71-321 (437)
258 PRK13237 tyrosine phenol-lyase 99.2 2.9E-09 6.3E-14 112.3 25.5 191 200-417 72-284 (460)
259 PRK06058 4-aminobutyrate amino 99.2 1.9E-09 4.2E-14 116.3 25.0 255 161-438 54-333 (443)
260 PRK04311 selenocysteine syntha 99.2 2.7E-09 5.9E-14 114.6 24.5 219 164-416 80-315 (464)
261 PRK06434 cystathionine gamma-l 99.2 2.3E-09 4.9E-14 112.9 20.9 205 206-456 64-275 (384)
262 TIGR00709 dat 2,4-diaminobutyr 99.1 1.4E-08 3E-13 109.6 24.6 265 161-450 37-334 (442)
263 PRK08593 4-aminobutyrate amino 99.1 7.1E-08 1.5E-12 104.1 29.2 255 161-438 40-321 (445)
264 KOG0053|consensus 99.1 1E-08 2.3E-13 105.3 21.3 206 209-456 80-291 (409)
265 COG0626 MetC Cystathionine bet 99.1 8.4E-09 1.8E-13 107.3 20.6 213 205-458 62-281 (396)
266 PRK05964 adenosylmethionine--8 99.1 2.9E-08 6.3E-13 106.6 24.6 256 161-438 40-321 (423)
267 TIGR00474 selA seryl-tRNA(sec) 99.1 2.7E-08 5.9E-13 106.7 23.5 206 176-416 87-310 (454)
268 PF00266 Aminotran_5: Aminotra 99.0 3.1E-08 6.8E-13 104.6 22.1 200 182-416 11-223 (371)
269 PLN02994 1-aminocyclopropane-1 99.0 4.4E-10 9.6E-15 102.3 6.8 65 201-270 87-153 (153)
270 PF01212 Beta_elim_lyase: Beta 99.0 1.6E-09 3.6E-14 109.5 11.3 191 184-399 9-206 (290)
271 COG2008 GLY1 Threonine aldolas 99.0 4.5E-08 9.8E-13 98.4 19.1 268 182-480 12-291 (342)
272 PRK03715 argD acetylornithine 98.9 1.2E-07 2.7E-12 100.7 22.8 217 161-399 34-261 (395)
273 PRK06541 hypothetical protein; 98.9 3.3E-07 7.1E-12 99.2 26.1 254 161-437 50-339 (460)
274 PRK02769 histidine decarboxyla 98.9 1.7E-07 3.7E-12 98.7 23.2 232 208-461 63-309 (380)
275 KOG1549|consensus 98.9 4.2E-08 9.1E-13 101.2 17.9 188 182-399 55-255 (428)
276 TIGR01814 kynureninase kynuren 98.9 1.6E-07 3.5E-12 100.4 23.1 146 226-391 83-240 (406)
277 PF01276 OKR_DC_1: Orn/Lys/Arg 98.9 1.5E-08 3.1E-13 106.4 12.4 176 209-402 69-255 (417)
278 COG1104 NifS Cysteine sulfinat 98.9 2.7E-07 5.9E-12 94.9 21.1 191 181-399 12-215 (386)
279 COG2873 MET17 O-acetylhomoseri 98.9 3.4E-07 7.5E-12 91.9 20.7 217 206-459 62-311 (426)
280 PRK13034 serine hydroxymethylt 98.9 2.5E-07 5.4E-12 99.1 21.2 215 148-399 14-243 (416)
281 COG0075 Serine-pyruvate aminot 98.8 2.5E-06 5.4E-11 88.4 26.3 227 231-515 57-286 (383)
282 PF04864 Alliinase_C: Allinase 98.8 2.7E-08 5.8E-13 99.3 10.9 194 208-438 45-241 (363)
283 PLN03032 serine decarboxylase; 98.8 2.4E-07 5.2E-12 97.1 18.7 233 207-461 63-312 (374)
284 PRK05769 4-aminobutyrate amino 98.8 1E-06 2.2E-11 95.0 23.6 254 161-438 52-334 (441)
285 PRK13580 serine hydroxymethylt 98.7 3.4E-07 7.4E-12 97.9 17.1 220 163-418 49-310 (493)
286 PLN02482 glutamate-1-semialdeh 98.7 2.9E-06 6.2E-11 92.0 24.3 241 161-437 97-361 (474)
287 TIGR03372 putres_am_tran putre 98.7 2.5E-06 5.5E-11 91.6 23.5 245 161-437 73-340 (442)
288 KOG1368|consensus 98.7 6.9E-07 1.5E-11 86.9 16.9 226 182-437 34-268 (384)
289 PRK12389 glutamate-1-semialdeh 98.7 5.5E-06 1.2E-10 89.1 24.1 241 161-437 51-315 (428)
290 COG1103 Archaea-specific pyrid 98.7 3.8E-06 8.3E-11 80.8 19.8 174 208-416 63-241 (382)
291 PRK04013 argD acetylornithine/ 98.6 2.3E-06 5.1E-11 89.7 19.8 234 161-438 22-271 (364)
292 COG4992 ArgD Ornithine/acetylo 98.6 5.1E-06 1.1E-10 85.5 21.0 262 161-459 40-323 (404)
293 COG0160 GabT 4-aminobutyrate a 98.6 8.5E-06 1.8E-10 86.2 23.3 295 161-481 54-384 (447)
294 PRK00615 glutamate-1-semialdeh 98.6 5.1E-06 1.1E-10 89.2 22.0 248 161-437 51-316 (433)
295 COG0076 GadB Glutamate decarbo 98.6 4.6E-06 9.9E-11 89.7 21.5 262 181-461 73-359 (460)
296 COG0001 HemL Glutamate-1-semia 98.6 1.5E-05 3.1E-10 83.1 23.6 241 161-438 51-316 (432)
297 PRK11522 putrescine--2-oxoglut 98.6 8.2E-06 1.8E-10 88.3 21.9 256 161-448 80-361 (459)
298 PRK15029 arginine decarboxylas 98.5 3.7E-06 8.1E-11 94.7 19.3 177 204-399 202-398 (755)
299 PLN02414 glycine dehydrogenase 98.5 2.7E-06 5.8E-11 98.5 18.3 164 209-399 571-747 (993)
300 PRK05639 4-aminobutyrate amino 98.5 2E-05 4.4E-10 85.3 24.1 250 161-437 51-334 (457)
301 PRK06062 hypothetical protein; 98.5 2.3E-05 5.1E-10 84.7 24.0 264 161-449 51-345 (451)
302 PRK07046 aminotransferase; Val 98.5 0.00011 2.4E-09 79.4 28.6 238 161-438 73-339 (453)
303 PRK07986 adenosylmethionine--8 98.5 1.3E-05 2.8E-10 86.0 20.8 254 161-438 41-325 (428)
304 PTZ00094 serine hydroxymethylt 98.5 1.3E-05 2.7E-10 87.1 20.8 204 162-399 33-257 (452)
305 cd00611 PSAT_like Phosphoserin 98.5 4.2E-06 9.1E-11 87.8 16.2 191 180-415 8-214 (355)
306 PRK06943 adenosylmethionine--8 98.5 5.6E-05 1.2E-09 81.8 25.2 254 161-438 52-343 (453)
307 PRK13360 omega amino acid--pyr 98.5 3.3E-05 7.3E-10 83.3 23.3 253 161-437 44-336 (442)
308 PLN02760 4-aminobutyrate:pyruv 98.5 4.3E-05 9.2E-10 83.6 24.2 256 161-438 87-382 (504)
309 PRK05965 hypothetical protein; 98.4 6.4E-05 1.4E-09 81.5 25.3 265 161-448 44-350 (459)
310 PRK06082 4-aminobutyrate amino 98.4 5.2E-05 1.1E-09 82.2 24.6 249 162-437 71-342 (459)
311 PRK07482 hypothetical protein; 98.4 5.7E-05 1.2E-09 82.0 24.9 254 161-438 48-342 (461)
312 PLN02263 serine decarboxylase 98.4 2E-05 4.4E-10 84.2 20.6 235 207-461 130-379 (470)
313 PRK12403 putative aminotransfe 98.4 8.7E-05 1.9E-09 80.5 25.3 254 161-437 52-340 (460)
314 PRK07030 adenosylmethionine--8 98.4 9.1E-05 2E-09 80.4 25.2 253 161-438 45-337 (466)
315 TIGR01788 Glu-decarb-GAD gluta 98.4 6.8E-06 1.5E-10 88.0 16.1 202 182-399 53-274 (431)
316 TIGR00508 bioA adenosylmethion 98.4 3.9E-05 8.4E-10 82.5 22.0 252 161-438 43-328 (427)
317 PF00202 Aminotran_3: Aminotra 98.4 4.4E-06 9.6E-11 87.0 14.4 254 161-438 14-291 (339)
318 PRK09221 beta alanine--pyruvat 98.4 7.3E-05 1.6E-09 80.8 23.4 253 161-437 47-339 (445)
319 PRK06173 adenosylmethionine--8 98.4 6E-05 1.3E-09 81.0 22.6 251 161-437 42-326 (429)
320 PRK06916 adenosylmethionine--8 98.4 0.00014 3E-09 79.0 25.3 253 161-437 54-345 (460)
321 TIGR02617 tnaA_trp_ase tryptop 98.4 0.0001 2.2E-09 77.4 23.0 229 182-440 55-321 (467)
322 PF06838 Met_gamma_lyase: Meth 98.3 4.2E-05 9.1E-10 77.4 19.1 182 205-419 53-250 (403)
323 PRK06105 aminotransferase; Pro 98.3 0.0001 2.2E-09 80.0 23.7 265 161-448 46-353 (460)
324 TIGR01364 serC_1 phosphoserine 98.3 7.3E-05 1.6E-09 78.2 21.8 237 183-461 4-268 (349)
325 PRK08742 adenosylmethionine--8 98.3 0.00018 3.9E-09 78.1 25.2 264 161-449 62-372 (472)
326 PRK07481 hypothetical protein; 98.3 0.00017 3.7E-09 78.0 24.8 255 161-437 40-334 (449)
327 PRK07036 hypothetical protein; 98.3 0.00026 5.6E-09 76.9 25.6 255 161-438 49-343 (466)
328 PRK07483 hypothetical protein; 98.3 0.00019 4E-09 77.6 24.3 264 161-448 28-332 (443)
329 PRK07678 aminotransferase; Val 98.3 0.00018 3.9E-09 77.9 24.3 253 161-438 45-334 (451)
330 PRK06938 diaminobutyrate--2-ox 98.3 0.00018 3.9E-09 78.1 24.2 266 161-448 61-357 (464)
331 PRK15400 lysine decarboxylase 98.3 2.2E-05 4.7E-10 87.7 17.1 172 204-396 192-376 (714)
332 PRK05630 adenosylmethionine--8 98.3 0.0001 2.2E-09 79.1 21.6 252 161-437 38-321 (422)
333 PLN02880 tyrosine decarboxylas 98.3 0.00022 4.7E-09 77.9 24.3 260 184-461 97-397 (490)
334 PLN02590 probable tyrosine dec 98.3 0.00018 4E-09 78.8 23.4 260 184-461 145-445 (539)
335 PRK06917 hypothetical protein; 98.3 0.00027 5.9E-09 76.4 24.4 255 161-438 29-319 (447)
336 PRK06209 glutamate-1-semialdeh 98.3 8.3E-05 1.8E-09 80.1 20.4 215 161-413 46-271 (431)
337 PLN03226 serine hydroxymethylt 98.2 0.00023 5E-09 77.4 23.8 208 163-399 34-258 (475)
338 PLN02271 serine hydroxymethylt 98.2 0.00025 5.5E-09 76.7 23.1 206 163-399 148-373 (586)
339 PRK06931 diaminobutyrate--2-ox 98.2 0.00046 1E-08 74.8 25.2 254 161-438 56-338 (459)
340 COG1921 SelA Selenocysteine sy 98.2 0.00022 4.7E-09 73.7 21.1 217 165-417 22-246 (395)
341 PRK07480 putative aminotransfe 98.2 0.00037 7.9E-09 75.6 23.7 255 161-438 48-338 (456)
342 PRK15399 lysine decarboxylase 98.2 0.00014 3E-09 81.4 20.1 174 204-399 192-379 (713)
343 KOG1401|consensus 98.2 0.0005 1.1E-08 70.4 21.9 264 162-451 55-339 (433)
344 PRK05355 3-phosphoserine/phosp 98.1 0.00027 5.8E-09 74.3 20.5 239 180-461 12-279 (360)
345 TIGR03799 NOD_PanD_pyr putativ 98.1 0.00052 1.1E-08 75.3 23.2 244 199-461 118-417 (522)
346 PRK06149 hypothetical protein; 98.1 0.00046 1E-08 81.7 24.2 250 161-438 583-860 (972)
347 PLN02724 Molybdenum cofactor s 98.1 0.00027 5.8E-09 82.1 21.8 179 208-415 80-284 (805)
348 TIGR00461 gcvP glycine dehydro 98.1 8.5E-05 1.8E-09 85.4 17.3 181 199-399 516-709 (939)
349 PF00464 SHMT: Serine hydroxym 98.1 9.2E-05 2E-09 77.7 15.8 196 182-399 32-244 (399)
350 PF00282 Pyridoxal_deC: Pyrido 98.1 3.4E-05 7.4E-10 81.3 12.5 205 184-404 54-278 (373)
351 KOG1359|consensus 98.1 0.00052 1.1E-08 67.1 19.1 216 162-425 66-294 (417)
352 PRK13578 ornithine decarboxyla 98.1 0.00019 4.2E-09 80.4 18.4 174 205-398 172-366 (720)
353 COG1982 LdcC Arginine/lysine/o 98.0 0.00046 9.9E-09 74.5 18.7 166 209-399 73-245 (557)
354 PRK06148 hypothetical protein; 97.9 0.0011 2.3E-08 78.8 22.8 258 161-446 622-911 (1013)
355 PRK05367 glycine dehydrogenase 97.9 0.00033 7.1E-09 81.8 17.9 176 205-399 537-721 (954)
356 COG0112 GlyA Glycine/serine hy 97.9 0.00091 2E-08 68.4 18.5 204 182-418 38-254 (413)
357 KOG1360|consensus 97.9 0.00061 1.3E-08 69.3 16.8 206 183-422 187-400 (570)
358 PRK03080 phosphoserine aminotr 97.9 0.00069 1.5E-08 71.8 18.2 185 182-415 23-216 (378)
359 PRK12566 glycine dehydrogenase 97.8 0.00027 5.8E-09 80.9 14.7 182 199-399 529-722 (954)
360 KOG1404|consensus 97.8 0.0015 3.4E-08 66.5 18.0 262 160-448 47-340 (442)
361 PRK08297 L-lysine aminotransfe 97.8 0.0041 8.9E-08 67.2 22.7 248 162-438 44-340 (443)
362 TIGR03251 LAT_fam L-lysine 6-t 97.7 0.0079 1.7E-07 64.8 23.1 193 161-359 36-268 (431)
363 TIGR00699 GABAtrns_euk 4-amino 97.7 0.0032 6.8E-08 68.2 19.5 192 161-359 56-301 (464)
364 PRK05367 glycine dehydrogenase 97.6 0.0023 5E-08 74.9 18.1 193 167-414 80-292 (954)
365 KOG2862|consensus 97.6 0.016 3.5E-07 57.5 20.8 158 231-418 69-230 (385)
366 PF03841 SelA: L-seryl-tRNA se 97.5 0.0002 4.4E-09 73.2 6.6 213 178-418 14-237 (367)
367 TIGR03811 tyr_de_CO2_Ent tyros 97.4 0.0063 1.4E-07 67.7 18.2 165 185-356 99-326 (608)
368 TIGR01366 serC_3 phosphoserine 97.4 0.005 1.1E-07 64.7 16.7 188 181-415 13-207 (361)
369 PLN02452 phosphoserine transam 97.4 0.018 3.9E-07 60.5 20.1 228 210-513 52-285 (365)
370 PLN02397 aspartate transaminas 97.4 0.00027 5.8E-09 76.1 6.5 72 2-74 118-189 (423)
371 PLN02974 adenosylmethionine-8- 97.4 0.037 7.9E-07 63.9 24.0 252 164-437 366-705 (817)
372 COG4100 Cystathionine beta-lya 97.4 0.0078 1.7E-07 59.3 15.4 181 200-416 58-258 (416)
373 TIGR01365 serC_2 phosphoserine 97.2 0.025 5.5E-07 59.5 18.3 134 232-399 61-198 (374)
374 PLN02672 methionine S-methyltr 97.1 0.0084 1.8E-07 70.4 15.1 213 193-432 413-641 (1082)
375 COG0161 BioA Adenosylmethionin 97.1 0.045 9.7E-07 58.2 18.9 263 161-448 42-348 (449)
376 KOG1357|consensus 97.1 0.0014 3.1E-08 67.8 7.4 190 209-436 185-391 (519)
377 PLN02414 glycine dehydrogenase 97.0 0.022 4.7E-07 66.8 16.9 190 168-399 108-312 (993)
378 KOG1383|consensus 96.6 0.019 4.1E-07 60.0 11.6 236 206-461 116-371 (491)
379 PTZ00376 aspartate aminotransf 96.6 0.0037 8E-08 66.8 6.4 71 4-74 101-171 (404)
380 COG1003 GcvP Glycine cleavage 96.5 0.039 8.4E-07 57.4 12.8 141 199-352 95-243 (496)
381 PF05889 SLA_LP_auto_ag: Solub 96.4 0.036 7.7E-07 57.6 11.8 170 230-417 75-248 (389)
382 PRK12462 phosphoserine aminotr 96.3 0.31 6.6E-06 51.0 18.1 208 213-460 52-281 (364)
383 COG3033 TnaA Tryptophanase [Am 96.1 0.045 9.8E-07 55.5 10.2 142 199-351 72-227 (471)
384 PRK09257 aromatic amino acid a 95.9 0.016 3.5E-07 61.7 6.9 70 4-74 98-167 (396)
385 PF02347 GDC-P: Glycine cleava 95.5 0.15 3.2E-06 54.2 12.0 189 167-399 69-275 (429)
386 KOG3843|consensus 95.0 0.25 5.4E-06 48.1 10.7 210 224-451 71-284 (432)
387 TIGR00461 gcvP glycine dehydro 94.8 1.2 2.6E-05 52.1 17.5 147 168-349 69-229 (939)
388 COG0403 GcvP Glycine cleavage 94.3 8.2 0.00018 40.6 21.0 192 167-399 79-289 (450)
389 PF00155 Aminotran_1_2: Aminot 93.9 0.11 2.3E-06 54.5 6.2 78 3-81 70-147 (363)
390 KOG1403|consensus 93.6 1.3 2.9E-05 44.0 12.5 188 231-435 104-323 (452)
391 KOG1402|consensus 93.1 0.85 1.8E-05 46.0 10.4 127 296-438 195-322 (427)
392 KOG1358|consensus 92.6 0.98 2.1E-05 46.6 10.3 207 162-399 93-315 (467)
393 KOG0628|consensus 92.0 0.28 6.2E-06 51.5 5.8 94 261-358 185-280 (511)
394 KOG0629|consensus 91.9 1.3 2.9E-05 46.2 10.3 149 199-354 130-294 (510)
395 COG3844 Kynureninase [Amino ac 90.9 2.1 4.6E-05 43.3 10.3 145 227-398 91-242 (407)
396 TIGR01264 tyr_amTase_E tyrosin 90.7 0.38 8.2E-06 51.3 5.5 64 5-71 100-163 (401)
397 PLN00145 tyrosine/nicotianamin 90.0 0.52 1.1E-05 50.8 5.9 63 4-69 121-183 (430)
398 PRK08637 hypothetical protein; 89.9 0.6 1.3E-05 49.5 6.2 67 4-74 73-140 (388)
399 PRK07550 hypothetical protein; 88.5 0.86 1.9E-05 48.2 6.2 63 6-71 96-158 (386)
400 KOG0634|consensus 88.5 2.7 5.9E-05 44.1 9.3 150 373-555 299-468 (472)
401 PRK08912 hypothetical protein; 88.4 0.79 1.7E-05 48.5 5.8 64 4-71 91-154 (387)
402 KOG1405|consensus 86.9 18 0.00039 37.2 13.6 180 296-514 254-446 (484)
403 PRK09082 methionine aminotrans 86.8 0.9 1.9E-05 48.1 5.0 63 6-72 97-159 (386)
404 PRK07309 aromatic amino acid a 85.6 1.5 3.3E-05 46.5 6.1 67 4-74 95-161 (391)
405 PRK08361 aspartate aminotransf 85.1 1.6 3.4E-05 46.3 5.9 66 5-73 98-163 (391)
406 cd01494 AAT_I Aspartate aminot 84.8 1.4 3E-05 39.8 4.7 59 5-66 22-81 (170)
407 PRK08636 aspartate aminotransf 84.8 1.8 3.8E-05 46.2 6.1 66 8-77 103-169 (403)
408 PLN02656 tyrosine transaminase 84.6 2 4.3E-05 46.0 6.4 63 5-70 101-163 (409)
409 TIGR03540 DapC_direct LL-diami 84.5 1.5 3.1E-05 46.4 5.3 62 9-73 100-161 (383)
410 PRK07337 aminotransferase; Val 84.1 1.7 3.7E-05 46.0 5.6 64 5-71 95-158 (388)
411 COG2102 Predicted ATPases of P 83.8 42 0.00092 32.3 14.0 121 272-421 52-172 (223)
412 KOG2040|consensus 83.5 12 0.00026 41.4 11.3 139 205-353 577-720 (1001)
413 TIGR01265 tyr_nico_aTase tyros 82.9 1.9 4.2E-05 45.9 5.4 64 5-71 101-164 (403)
414 PRK07777 aminotransferase; Val 82.7 2.1 4.5E-05 45.3 5.6 67 4-73 89-156 (387)
415 PRK05957 aspartate aminotransf 82.5 2.1 4.6E-05 45.3 5.5 65 5-74 94-158 (389)
416 PTZ00433 tyrosine aminotransfe 82.5 2.3 5E-05 45.5 5.8 64 5-71 109-172 (412)
417 PTZ00377 alanine aminotransfer 82.3 2.6 5.7E-05 46.1 6.3 70 4-75 142-211 (481)
418 PLN02187 rooty/superroot1 81.1 2.6 5.5E-05 46.0 5.6 63 5-70 136-198 (462)
419 PRK09276 LL-diaminopimelate am 81.0 2.6 5.6E-05 44.5 5.5 59 8-69 101-159 (385)
420 PRK06108 aspartate aminotransf 81.0 2.7 5.9E-05 44.2 5.7 65 5-72 89-154 (382)
421 PRK07366 succinyldiaminopimela 79.7 3.2 6.9E-05 43.9 5.7 62 8-72 100-161 (388)
422 PLN02376 1-aminocyclopropane-1 79.7 7.6 0.00016 42.7 8.7 69 4-75 123-192 (496)
423 PRK06836 aspartate aminotransf 79.6 3.1 6.8E-05 44.2 5.6 64 6-73 102-165 (394)
424 PRK07683 aminotransferase A; V 79.6 3.1 6.7E-05 44.1 5.5 49 4-55 93-141 (387)
425 PRK07681 aspartate aminotransf 79.6 3.3 7.1E-05 44.0 5.8 63 8-73 101-163 (399)
426 PRK12414 putative aminotransfe 79.0 2.8 6E-05 44.4 5.0 61 8-72 98-158 (384)
427 PRK15481 transcriptional regul 78.2 3.2 6.9E-05 44.7 5.2 59 6-70 147-205 (431)
428 PRK07324 transaminase; Validat 78.0 3.3 7.1E-05 43.6 5.1 63 4-69 84-146 (373)
429 PLN02231 alanine transaminase 77.9 4.3 9.3E-05 45.1 6.2 68 6-76 197-265 (534)
430 PRK09148 aminotransferase; Val 77.6 4 8.7E-05 43.5 5.7 49 6-57 98-146 (405)
431 PRK07682 hypothetical protein; 77.6 3.5 7.5E-05 43.4 5.2 63 6-71 87-149 (378)
432 COG1167 ARO8 Transcriptional r 77.5 4 8.7E-05 44.4 5.7 46 82-130 163-208 (459)
433 PRK08068 transaminase; Reviewe 77.0 4.2 9.2E-05 43.0 5.7 61 10-73 104-164 (389)
434 PRK08960 hypothetical protein; 76.1 4.8 0.0001 42.6 5.8 62 6-71 98-160 (387)
435 PLN00175 aminotransferase fami 76.1 3.8 8.2E-05 43.9 5.0 61 7-71 122-182 (413)
436 PLN02368 alanine transaminase 75.7 5.5 0.00012 42.6 6.1 66 8-75 138-203 (407)
437 PRK01688 histidinol-phosphate 75.4 5.9 0.00013 41.3 6.1 60 9-72 83-142 (351)
438 PRK07568 aspartate aminotransf 74.3 5.5 0.00012 42.2 5.7 51 4-57 92-142 (397)
439 PRK12566 glycine dehydrogenase 74.0 2E+02 0.0043 34.3 20.0 186 166-399 82-286 (954)
440 PLN00143 tyrosine/nicotianamin 73.6 5.9 0.00013 42.3 5.7 62 6-70 103-164 (409)
441 PRK05764 aspartate aminotransf 73.6 5.7 0.00012 42.0 5.6 65 6-73 97-161 (393)
442 COG0031 CysK Cysteine synthase 72.9 28 0.0006 35.4 9.8 58 226-287 58-116 (300)
443 PRK13238 tnaA tryptophanase/L- 72.5 7.2 0.00016 42.4 6.1 67 4-74 97-171 (460)
444 PRK06348 aspartate aminotransf 72.5 6.9 0.00015 41.3 5.9 63 8-73 97-159 (384)
445 TIGR03588 PseC UDP-4-keto-6-de 72.4 5.3 0.00011 42.1 5.0 65 7-74 51-115 (380)
446 PRK02610 histidinol-phosphate 72.4 6.7 0.00015 41.3 5.7 63 9-74 100-162 (374)
447 PLN02607 1-aminocyclopropane-1 72.1 10 0.00022 41.1 7.1 70 5-77 125-195 (447)
448 PRK11658 UDP-4-amino-4-deoxy-L 72.0 4.9 0.00011 42.5 4.5 66 6-74 54-119 (379)
449 PRK05387 histidinol-phosphate 72.0 5.8 0.00013 41.2 5.1 60 6-70 83-142 (353)
450 PRK08363 alanine aminotransfer 71.5 5.7 0.00012 42.2 4.9 61 8-71 101-161 (398)
451 PRK09105 putative aminotransfe 70.3 6.2 0.00013 41.5 4.9 59 6-69 101-159 (370)
452 PRK04781 histidinol-phosphate 69.5 7 0.00015 41.0 5.0 61 9-71 85-146 (364)
453 TIGR01141 hisC histidinol-phos 68.6 6.7 0.00015 40.6 4.7 59 8-71 79-137 (346)
454 TIGR03538 DapC_gpp succinyldia 67.7 11 0.00025 39.8 6.3 62 9-72 99-161 (393)
455 PRK05942 aspartate aminotransf 67.5 11 0.00023 40.1 6.0 62 8-72 105-166 (394)
456 PRK09147 succinyldiaminopimela 66.8 13 0.00027 39.5 6.4 60 8-71 98-161 (396)
457 PRK06225 aspartate aminotransf 66.2 8.5 0.00018 40.5 4.9 63 6-71 89-152 (380)
458 PRK03158 histidinol-phosphate 64.8 9.2 0.0002 39.8 4.8 56 9-70 90-145 (359)
459 PRK13355 bifunctional HTH-doma 64.7 10 0.00022 41.9 5.4 60 8-70 216-275 (517)
460 PRK08246 threonine dehydratase 64.5 84 0.0018 32.1 11.7 75 204-286 47-121 (310)
461 COG1932 SerC Phosphoserine ami 64.5 1.9E+02 0.004 30.2 16.7 112 344-513 171-286 (365)
462 PRK08354 putative aminotransfe 63.6 8.7 0.00019 39.2 4.3 44 7-54 61-104 (311)
463 COG0436 Aspartate/tyrosine/aro 62.3 13 0.00029 39.5 5.4 48 6-56 95-142 (393)
464 PRK14807 histidinol-phosphate 62.1 12 0.00027 38.8 5.2 61 9-74 85-145 (351)
465 KOG2467|consensus 62.0 2.1E+02 0.0045 30.0 19.7 191 182-399 52-264 (477)
466 PF01902 ATP_bind_4: ATP-bindi 61.1 1.5E+02 0.0033 28.7 12.0 148 237-417 7-167 (218)
467 PRK11706 TDP-4-oxo-6-deoxy-D-g 60.7 13 0.00029 39.1 5.1 65 6-73 52-116 (375)
468 PRK04870 histidinol-phosphate 60.6 14 0.00031 38.4 5.3 46 25-73 104-149 (356)
469 TIGR03801 asp_4_decarbox aspar 60.2 28 0.0006 38.5 7.6 41 491-536 403-443 (521)
470 PLN03026 histidinol-phosphate 60.2 16 0.00034 38.6 5.6 60 9-73 112-171 (380)
471 cd00609 AAT_like Aspartate ami 60.2 12 0.00027 38.2 4.7 53 4-59 63-115 (350)
472 TIGR00290 MJ0570_dom MJ0570-re 60.0 1.7E+02 0.0037 28.4 14.5 149 237-418 7-168 (223)
473 cd06568 GH20_SpHex_like A subg 59.5 19 0.0004 37.3 5.8 70 271-347 23-92 (329)
474 PRK06107 aspartate aminotransf 59.5 14 0.0003 39.3 5.1 59 9-70 102-160 (402)
475 PRK01533 histidinol-phosphate 59.1 16 0.00034 38.4 5.3 57 9-71 90-146 (366)
476 PRK05166 histidinol-phosphate 59.1 16 0.00034 38.4 5.3 44 25-71 111-154 (371)
477 cd00617 Tnase_like Tryptophana 59.1 17 0.00037 39.2 5.6 67 4-74 72-146 (431)
478 COG0079 HisC Histidinol-phosph 58.8 20 0.00044 37.5 6.0 119 53-193 51-174 (356)
479 cd02742 GH20_hexosaminidase Be 58.7 23 0.0005 36.1 6.3 69 271-347 21-89 (303)
480 PRK06855 aminotransferase; Val 58.3 35 0.00075 36.7 7.9 47 80-130 102-149 (433)
481 PLN02970 serine racemase 58.1 1.3E+02 0.0028 31.1 11.8 78 202-287 50-129 (328)
482 TIGR02379 ECA_wecE TDP-4-keto- 57.6 14 0.0003 39.1 4.6 65 6-73 52-116 (376)
483 PRK08638 threonine dehydratase 56.4 61 0.0013 33.6 9.1 52 231-286 77-128 (333)
484 PRK03317 histidinol-phosphate 54.7 22 0.00047 37.2 5.5 61 9-74 97-157 (368)
485 PF14258 DUF4350: Domain of un 54.4 79 0.0017 24.1 7.3 23 327-349 47-70 (70)
486 KOG1209|consensus 53.6 70 0.0015 30.8 7.9 88 229-324 7-94 (289)
487 PRK06290 aspartate aminotransf 53.2 30 0.00064 37.0 6.3 59 10-71 116-174 (410)
488 PRK14809 histidinol-phosphate 53.0 22 0.00047 37.0 5.2 47 8-57 90-136 (357)
489 cd01562 Thr-dehyd Threonine de 53.0 99 0.0021 31.3 9.9 54 230-287 66-119 (304)
490 PRK07590 L,L-diaminopimelate a 52.6 55 0.0012 34.8 8.3 95 29-124 38-145 (409)
491 PRK07392 threonine-phosphate d 52.5 23 0.00049 37.0 5.2 51 6-57 77-127 (360)
492 PRK08175 aminotransferase; Val 51.9 22 0.00048 37.6 5.1 50 5-57 93-145 (395)
493 PRK03321 putative aminotransfe 51.7 22 0.00048 36.9 5.0 62 8-71 79-140 (352)
494 cd06448 L-Ser-dehyd Serine deh 51.6 1.4E+02 0.003 30.7 10.7 54 230-287 52-105 (316)
495 cd00616 AHBA_syn 3-amino-5-hyd 51.6 22 0.00048 36.6 5.0 66 5-73 38-103 (352)
496 PRK05839 hypothetical protein; 51.5 27 0.00059 36.7 5.6 99 31-130 30-138 (374)
497 cd00378 SHMT Serine-glycine hy 51.1 26 0.00057 37.0 5.5 68 4-74 85-158 (402)
498 PRK07476 eutB threonine dehydr 51.0 90 0.0019 32.1 9.3 51 232-286 70-120 (322)
499 TIGR03537 DapC succinyldiamino 51.0 30 0.00065 35.9 5.8 63 8-72 68-132 (350)
500 cd00640 Trp-synth-beta_II Tryp 50.1 2.5E+02 0.0054 27.2 12.9 49 237-287 56-104 (244)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-54 Score=426.86 Aligned_cols=376 Identities=44% Similarity=0.804 Sum_probs=345.8
Q ss_pred ccchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy14428 145 EDIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDF 224 (583)
Q Consensus 145 ~~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g 224 (583)
.+.++|+.+.+.++++.++++|||++|.+.++.|.++..+.|++|.+.+.+......|.|..|.+++++++++.+.....
T Consensus 8 ~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~ 87 (396)
T COG1448 8 APADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADS 87 (396)
T ss_pred CCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCc
Confidence 36889999999999999999999999999999999989999999999999887788999999999999999999987666
Q ss_pred CCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHH
Q psy14428 225 PAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 225 ~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
..++.++|.-+||.||++|+.+.+.++..+.+ ..+|++++|+|+++..+|+.+|.++..+|++|.++.++|++.+.+.|
T Consensus 88 ~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~-~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L 166 (396)
T COG1448 88 PALAEDRVATVQTLGGTGALRVAADFLARFFP-DATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADL 166 (396)
T ss_pred HHHHhhhHhheecCCcchHHHHHHHHHHHhCC-CceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHH
Confidence 66888999999999999999999999988887 67899999999999999999999999999999998999999999999
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
++.+++..+++-+++|||||..++.++|++|+++.++++++.+.|-+|++|..+ .+++...++.++.....+++..|||
T Consensus 167 ~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~S 245 (396)
T COG1448 167 KTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFS 245 (396)
T ss_pred HhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhh
Confidence 999999999999999999999999999999999999999999999999999977 4567888888887777799999999
Q ss_pred ccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhcc
Q psy14428 385 KNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFY 464 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~ 464 (583)
|+||+.|.|+|.+.+++++++ ...++.+|++..+|..|
T Consensus 246 KnfgLYgERVGa~~vva~~~~------------------------------------------~a~~v~sqlk~~iR~~y 283 (396)
T COG1448 246 KNFGLYGERVGALSVVAEDAE------------------------------------------EADRVLSQLKAIIRTNY 283 (396)
T ss_pred hhhhhhhhccceeEEEeCCHH------------------------------------------HHHHHHHHHHHHHHhcc
Confidence 999999999999998777643 34466778889999999
Q ss_pred CCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhhhh
Q psy14428 465 SNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNRI 544 (583)
Q Consensus 465 ~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~~ 544 (583)
++||.+|+.++..+++||++++.|.+++..||+|+.++|..|.+.|++.+.+.+|+++..|.|||+|++++++|+++
T Consensus 284 SnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~r--- 360 (396)
T COG1448 284 SNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSPEQVDR--- 360 (396)
T ss_pred CCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCHHHHHH---
Confidence 99999999999999999999999999999999999999999999999998888899999999999999999999877
Q ss_pred hhhHHHHHHHHhhcCCCccccccccCCcceeecCCCCC
Q psy14428 545 SSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 582 (583)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (583)
+++++.+++++ . |++|.+||++.
T Consensus 361 --Lree~~IY~v~------------s-GRi~vaGl~~~ 383 (396)
T COG1448 361 --LREEFGIYLVA------------S-GRINVAGLNTS 383 (396)
T ss_pred --HHHhccEEEec------------C-CeeeeccCChh
Confidence 78888777653 3 68888888764
No 2
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.8e-50 Score=426.49 Aligned_cols=370 Identities=42% Similarity=0.731 Sum_probs=285.4
Q ss_pred hhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC
Q psy14428 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK 228 (583)
Q Consensus 149 ~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~ 228 (583)
++..+...++....++.|+|+.|.+.++...++..+.+.+++.++.++....+|++..|.++||++|++|+.+.++..++
T Consensus 12 ~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~ 91 (396)
T PRK09257 12 PILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALA 91 (396)
T ss_pred hHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccc
Confidence 44444443333345678999999874332222224788998888775544568999999999999999999887767778
Q ss_pred CCCe--EEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 229 DNRL--AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 229 ~~~I--~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
+++| ++ |+|+++|+.++..++.. +++||+|++++|+|+.|..+++..|++++.+|+.+++++++|++.+++.+.+
T Consensus 92 ~~~i~v~i--T~Ga~~al~~~~~~l~~-~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~ 168 (396)
T PRK09257 92 AGRVATVQ--TPGGTGALRVGADFLKR-AFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQ 168 (396)
T ss_pred cCeEEEEe--cCCccHHHHHHHHHHHH-hCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHh
Confidence 9988 88 99999999997443322 3569999999999999999999999999999984445589999999998865
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
..++++++++||||||||.++|.+++++|+++|++|+++||+||+|.+|.++.. .+..++.++.+..++||+++||||+
T Consensus 169 ~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~~~~~~~~~~~~~~vi~i~SfSK~ 247 (396)
T PRK09257 169 APAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLE-EDAYGLRAFAAAGLELLVASSFSKN 247 (396)
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchH-HHHHHHHHHHhcCCcEEEEEEcCCc
Confidence 445678899999999999999999999999999999999999999999987521 2345666655455789999999999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCC
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSN 466 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~ 466 (583)
|++||+|+||+++.+++++....+++++....+..+.+++.+.|.+++++++++.
T Consensus 248 ~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------------------------- 302 (396)
T PRK09257 248 FGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPE------------------------- 302 (396)
T ss_pred CccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHH-------------------------
Confidence 9999999999985324332222456666666666777788999999999887642
Q ss_pred CccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhhhhhh
Q psy14428 467 PPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNRISS 546 (583)
Q Consensus 467 ~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~~~~ 546 (583)
+.+.|.+++++++++|.++|+.+.+.|++.+.++.+.+..+++|+|.|..++.+..++
T Consensus 303 -----------------~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~----- 360 (396)
T PRK09257 303 -----------------LRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTPEQVDR----- 360 (396)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCHHHHHH-----
Confidence 2245777889999999999999999999986544577788999999999997644333
Q ss_pred hHHHHHHHHhhcCCCccccccccCCcceeecCCCCC
Q psy14428 547 IREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 582 (583)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (583)
+.++.++.+.+ . |+|+|+.++++
T Consensus 361 l~~~~~V~~~p------------~-~ri~~~~~~~~ 383 (396)
T PRK09257 361 LREEFGVYAVG------------S-GRINVAGLNES 383 (396)
T ss_pred HHHcCCEEEcC------------C-CeEEEeeCCHH
Confidence 33333332221 2 58999887765
No 3
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-50 Score=425.46 Aligned_cols=348 Identities=51% Similarity=0.915 Sum_probs=272.7
Q ss_pred hhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCC
Q psy14428 148 KPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAF 227 (583)
Q Consensus 148 ~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~ 227 (583)
+++..+.+.+++..+++.++|+.|++++..++..+.+.+.+++.++.......+|+|+.|.++||+++|+|+.+.++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~ 93 (404)
T PTZ00376 14 DPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYAL 93 (404)
T ss_pred ChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCcccc
Confidence 34444444443334578899999997433333444567777776655433458899999999999999999987777778
Q ss_pred CCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 228 KDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 228 ~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
++++|++.+|+|+++|+.++..++..++.+||+|++++|+|+.|...++..|++++.+|+.+++++++|++.+++.+++.
T Consensus 94 ~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~ 173 (404)
T PTZ00376 94 AEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTA 173 (404)
T ss_pred ccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhC
Confidence 99999954599999999998665667778899999999999999999999999999999944445899999999988654
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc
Q psy14428 308 PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 387 (583)
.++++++++||||||||.++|.+++++|+++|++|+++||+||+|.+|.+++...+..++..+.+..+++|+++||||+|
T Consensus 174 ~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~ 253 (404)
T PTZ00376 174 PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNM 253 (404)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcc
Confidence 45678999999999999999999999999999999999999999999998641112334555544456899999999999
Q ss_pred cccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCC
Q psy14428 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNP 467 (583)
Q Consensus 388 ~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~ 467 (583)
++||+|+||+++...+++..+.+++.+.+..+..+.+++.++|.++..+++++.
T Consensus 254 ~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-------------------------- 307 (404)
T PTZ00376 254 GLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPE-------------------------- 307 (404)
T ss_pred cccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHH--------------------------
Confidence 999999999953112321112344555555566677788899999999887642
Q ss_pred ccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChh
Q psy14428 468 PIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 537 (583)
Q Consensus 468 p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~ 537 (583)
+.+.|.++++++++++.++|+.+.+.|++.+.++.|.+..+++|||.|..++.+
T Consensus 308 ----------------~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~~ 361 (404)
T PTZ00376 308 ----------------LRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLTKE 361 (404)
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCCHH
Confidence 224566678888899999999999999998666567777899999999998754
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-49 Score=418.41 Aligned_cols=303 Identities=15% Similarity=0.172 Sum_probs=263.9
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCC-eEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNR-LAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~-I~i~~t~G~~ 241 (583)
.++|+|++|+|+.+ +++.+.+++.+.+.++.. +|++.+|.++||++||+++.+++|+.+++++ |++ |+|++
T Consensus 28 ~~vi~l~iG~Pd~~-----~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiiv--t~Ga~ 99 (393)
T COG0436 28 EDVIDLSIGEPDFP-----TPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIV--TAGAK 99 (393)
T ss_pred CCEEEeCCCCCCCC-----CCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCCHH
Confidence 58999999999743 567888888887766423 7889999999999999999999999999987 999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+|+.++ +..+.+|||+|++++|.|+.|...+..+|++++.+++..+ +++.+|++.+++++ +++++++++||||
T Consensus 100 ~al~~~---~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i---~~ktk~i~ln~P~ 173 (393)
T COG0436 100 EALFLA---FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAI---TPKTKAIILNSPN 173 (393)
T ss_pred HHHHHH---HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhc---CccceEEEEeCCC
Confidence 999985 4556777999999999999999999999999999998322 36899999999988 6689999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++++++++|+++|++|+++||.||+|.+|.|++ ..++++.++.+..+++|+++||||+|+|+|||+||+++
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~--~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~- 250 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDG--AEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG- 250 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCC--CCcCCHhhcCCCcceEEEEecccccccccccceeEeec-
Confidence 999999999999999999999999999999999999997 23556666544457999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
++ +++++.+.+++....+|++.++|.++..+|+.+.-
T Consensus 251 -~~----~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-------------------------------------- 287 (393)
T COG0436 251 -PP----EELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-------------------------------------- 287 (393)
T ss_pred -Ch----HHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc--------------------------------------
Confidence 64 47999999999999999999999999999987420
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-ccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHIT-NQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~-~~~g~f~~~~l~~ 536 (583)
...++.+++.|.++|+.+.+.|.+.+ +|.+.. |+|+||.|++++.
T Consensus 288 --------~~~~~~~~~~~~~rrd~l~~~l~~~~---g~~~~~~p~Ga~Y~~~~i~~ 333 (393)
T COG0436 288 --------DEVVEEMREEYRERRDLLVEALNEIG---GLSVVKPPEGAFYLFPKIPE 333 (393)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHHHhcC---CeeeccCCCeeEEEEeecCC
Confidence 11256677889999999999999864 366777 8899999998876
No 5
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.9e-48 Score=413.32 Aligned_cols=348 Identities=50% Similarity=0.883 Sum_probs=270.0
Q ss_pred chhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC
Q psy14428 147 IKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA 226 (583)
Q Consensus 147 ~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~ 226 (583)
.+++..+...++....+..++++.|.+.++.+.|...+.+.++...+...+...+|++..|.++||+++++|+.+.++..
T Consensus 32 ~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~ 111 (423)
T PLN02397 32 PDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPA 111 (423)
T ss_pred CChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCch
Confidence 44556655555555677889999997544445444567888887776543445689999999999999999997766555
Q ss_pred CCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 227 FKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 227 ~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
.++++|..+++.+++++..++..++..+. |||+|++++|+|+.|...++..|++++.+|+.+++++++|++.+++.+.+
T Consensus 112 ~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~-pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~ 190 (423)
T PLN02397 112 IKENRVATVQCLSGTGSLRLGAEFLARFY-PGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKA 190 (423)
T ss_pred hhcCeeEeeecccchHHHHHHHHHHHHhC-CCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHh
Confidence 55566655556677777665544555444 69999999999999999999999999999984344578999999988865
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
..++++++++||||||||.+++.+++++|+++|++|+++||+||+|.+|.+++...+..++..+....++||+++||||+
T Consensus 191 ~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~ 270 (423)
T PLN02397 191 APDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKN 270 (423)
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECccc
Confidence 55678999999999999999999999999999999999999999999999864111334555554444689999999999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCC
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSN 466 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~ 466 (583)
|+++|||+||+++..++++..+.+++.+.+..+..+.+++.+.|.+++.+++++.
T Consensus 271 ~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~------------------------- 325 (423)
T PLN02397 271 MGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPE------------------------- 325 (423)
T ss_pred CCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHH-------------------------
Confidence 9999999999963224432222345556666666777888899998888887632
Q ss_pred CccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChh
Q psy14428 467 PPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 537 (583)
Q Consensus 467 ~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~ 537 (583)
+...|.++++++++++.++|+.+.+.|++++.++.|.+..|++|||.|.+++.+
T Consensus 326 -----------------~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~~ 379 (423)
T PLN02397 326 -----------------LFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNKE 379 (423)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCHH
Confidence 234566778889999999999999999998766678888899999999998743
No 6
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-47 Score=412.47 Aligned_cols=349 Identities=15% Similarity=0.185 Sum_probs=286.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc--CC-CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK--NL-DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~--~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
..+..++|+.|.++++ .++.+.++++..+..+. .. ...|.+..|.++||++|++++...+|+.+++++|+| |
T Consensus 87 ~~~~~i~f~~g~p~~~---~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T 161 (459)
T COG1167 87 DDPSVIDFAGGLPDPS---LFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--T 161 (459)
T ss_pred CCCceecCCCCCCCcc---cCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--e
Confidence 4578899999998653 44667888888887754 22 578899999999999999999988999999999999 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeC
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQT 317 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~ 317 (583)
+|+++|++++ ++.+++|||+|++++|+|.....+++.+|+++++||+ |+ .|+|++.+++.+++. +...+|++|
T Consensus 162 ~G~q~al~l~---~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~-d~--~G~~~e~le~~~~~~-~~k~~y~~P 234 (459)
T COG1167 162 SGAQQALDLL---LRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPV-DE--DGIDPEALEEALAQW-KPKAVYVTP 234 (459)
T ss_pred CCHHHHHHHH---HHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCC-CC--CCCCHHHHHHHHhhc-CCcEEEECC
Confidence 9999999984 5667888999999999999999999999999999999 64 699999999998654 567789999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
+.|||||.+||.+++++|+++|++||++|||||+|++|.|++ .+.++++.+ +..++|||++||||+++ ||+|+||+
T Consensus 235 ~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~--~p~~~l~~l-d~~~rViy~gSFSK~l~-PglRlG~v 310 (459)
T COG1167 235 TFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDG--PPPPPLKAL-DAPGRVIYLGSFSKTLA-PGLRLGYV 310 (459)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCC--CCCCChHhh-CCCCCEEEEeeehhhcc-cccceeee
Confidence 999999999999999999999999999999999999999997 345567775 55789999999999997 99999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
++ | +++++++...+...+.++|.+.|.+++.++.++.
T Consensus 311 v~--p-----~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~------------------------------------ 347 (459)
T COG1167 311 VA--P-----PELIEKLLRLKQAADLGPSSLSQAALAAFLLSGH------------------------------------ 347 (459)
T ss_pred eC--C-----HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCC------------------------------------
Confidence 99 8 6899999999999999999999999999887543
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhhhhhhhHHHHHHHHhh
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNRISSIREELKSKILD 557 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 557 (583)
|.+|++++|..|.++|+.+.++|++.+ |+......|.+|+|.|..+++. +....+...+.+.+..+.+
T Consensus 348 ----------~~~hl~~lR~~y~~rr~~l~~~L~~~~-~~~~~~~~p~gG~flwl~l~~~-~~~~~l~~~a~~~gv~i~~ 415 (459)
T COG1167 348 ----------YDRHLRRLRREYARRRDALLEALAEYL-PELATWTRPEGGLFLWLELPEG-IDARELLAAALEKGVVVTP 415 (459)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeeeecCCceEEEEEEcCCC-CCHHHHHHHHHHCCCEEEc
Confidence 456688888999999999999999976 3446678899999999988775 1121221212222222222
Q ss_pred cCCCccccccc--cCCcceeecCCCCC
Q psy14428 558 KGSKKNWDHIT--NQKGMFCYTGLSAS 582 (583)
Q Consensus 558 ~~~~~~~~~~~--~~~~~~~~~~~~~~ 582 (583)
.+..|.... ...-++||+..++|
T Consensus 416 --~g~~f~~~~~~~~~~Rl~~s~~~~e 440 (459)
T COG1167 416 --LGSAFSADGDPRNGLRLSFSSPSEE 440 (459)
T ss_pred --CCccccCCCCCCCeEEEEcCCCCHH
Confidence 133333322 22237899988765
No 7
>KOG1411|consensus
Probab=100.00 E-value=1.6e-47 Score=370.35 Aligned_cols=377 Identities=51% Similarity=0.919 Sum_probs=347.5
Q ss_pred cccchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCC
Q psy14428 144 MEDIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGED 223 (583)
Q Consensus 144 ~~~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~ 223 (583)
|.|++||+-+...++++.++.+|||+.|.+.++.|.|++++.|++|.+++........|.|..|++++.+..+++.....
T Consensus 33 maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~ 112 (427)
T KOG1411|consen 33 MAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDN 112 (427)
T ss_pred CCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCC
Confidence 36899999999999999999999999999999999999999999999998887667899999999999999999999888
Q ss_pred CCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHH
Q psy14428 224 FPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 303 (583)
Q Consensus 224 g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~ 303 (583)
...+..++|..+||-.|++|+.+.+.++..+.+ +..|.+|+|+|.++..+++.+|+.+..+.+.|+.+.|+|++.+.++
T Consensus 113 s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~-~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~led 191 (427)
T KOG1411|consen 113 SPVIKEKRIVTVQTLSGTGALRVGAEFLARFYP-SRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLED 191 (427)
T ss_pred chhhhccceeEEEeccCcchhhHHHHHHHhhcc-ccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHH
Confidence 888889999999999999999999999999988 8999999999999999999999999999998888999999999999
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecC
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
+.+..++..+++-.+.|||||+..+.|+|++|.++.++.+.+.+.|-+|+.|..++...+..+++.|.+...+++.+.||
T Consensus 192 l~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSy 271 (427)
T KOG1411|consen 192 LGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSY 271 (427)
T ss_pred HhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhh
Confidence 99988899999999999999999999999999999999999999999999999998777888999998888999999999
Q ss_pred cccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc
Q psy14428 384 SKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF 463 (583)
Q Consensus 384 SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~ 463 (583)
+|++|+.|-|+|.+-++|.+++ ...++.+|++.++|.+
T Consensus 272 AKNMGLYgERvGa~svvc~~ad------------------------------------------~A~rV~SQlk~liRpm 309 (427)
T KOG1411|consen 272 AKNMGLYGERVGALSVVCKDAD------------------------------------------EAKRVESQLKILIRPM 309 (427)
T ss_pred hhhcchhhhccceeEEEecCHH------------------------------------------HHHHHHHHHHHHhccc
Confidence 9999999999999988777643 4456778899999999
Q ss_pred cCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhhh
Q psy14428 464 YSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNR 543 (583)
Q Consensus 464 ~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~ 543 (583)
|++||.+|+.|+..+++|++++.+|..+++.|..|+..+|+.|.+.|+..+.+++|++++.|-|||+|++++++|.+.
T Consensus 310 YSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~peQv~~-- 387 (427)
T KOG1411|consen 310 YSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNPEQVDW-- 387 (427)
T ss_pred ccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCHHHHHH--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhhhHHHHHHHHhhcCCCccccccccCCcceeecCCCC
Q psy14428 544 ISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 581 (583)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (583)
+..+..+++. +. |++|.+|++.
T Consensus 388 ---l~ke~~iYmT------------~d-GRiS~aG~ss 409 (427)
T KOG1411|consen 388 ---LTKEYHIYLT------------KD-GRISMAGLSS 409 (427)
T ss_pred ---HHhhheeeec------------cC-ceEeeccccc
Confidence 5566654442 23 5777777664
No 8
>KOG1412|consensus
Probab=100.00 E-value=2.3e-45 Score=350.67 Aligned_cols=364 Identities=43% Similarity=0.775 Sum_probs=329.8
Q ss_pred cchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy14428 146 DIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLDHEYANIGGDAKFCKLAAQLAYGEDF 224 (583)
Q Consensus 146 ~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~g 224 (583)
++..++.+...+.++.+|.+++|++|.+..+.|.||..|.++++...+..+ ...+.|.|..|.+.|+.+.++.+.+...
T Consensus 13 ~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s 92 (410)
T KOG1412|consen 13 PPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADS 92 (410)
T ss_pred ChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCc
Confidence 456667777777788899999999999999999999999999998888766 4578899999999999999999999888
Q ss_pred CCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcC-CeEEEEecccCCCCCCChhhHHHH
Q psy14428 225 PAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSR-LNVGAYRYFDNKTNGLDFAGMMED 303 (583)
Q Consensus 225 ~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G-~~~~~v~~~d~~~~g~d~~~l~~~ 303 (583)
..+..+++.-+|+-+|++|+.+.+.++..+++ ..+|.+.+|+|.++..+++.+| .++..++++|.++-.+|++.+..+
T Consensus 93 ~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 93 PAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSD 171 (410)
T ss_pred hhhhhccccceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHH
Confidence 89999999999999999999999999999998 6789999999999999999999 567788998888889999999999
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecC
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
|+.+++...+++-.+.|||||...++|+|++|++..++++++.+.|-+|++|..++.+.+...++.+.+....++++.||
T Consensus 172 l~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSF 251 (410)
T KOG1412|consen 172 LESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSF 251 (410)
T ss_pred HhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhh
Confidence 99988888888777889999999999999999999999999999999999999999888899999998888889999999
Q ss_pred cccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc
Q psy14428 384 SKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF 463 (583)
Q Consensus 384 SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~ 463 (583)
+|+||+.|-|+|-+..+..++. .+..+.+|+..++|..
T Consensus 252 aKNfGlYneRvGnltvv~~n~a------------------------------------------~i~~v~SQl~lviR~~ 289 (410)
T KOG1412|consen 252 AKNFGLYNERVGNLTVVVNNPA------------------------------------------VIAGVKSQLTLVIRSN 289 (410)
T ss_pred hhhcccccccccceEEEecChh------------------------------------------HHHHHHHHHHHHHhhc
Confidence 9999999999998887544421 2334556777788889
Q ss_pred cCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhhh
Q psy14428 464 YSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNR 543 (583)
Q Consensus 464 ~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~ 543 (583)
+++||..|+.|+.++|+.|++.++|.+.++.|..|+.++|..|.+.|..+++||+|+++..|.|||+|.+|++.+++.
T Consensus 290 ~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~-- 367 (410)
T KOG1412|consen 290 WSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTPAQVDH-- 367 (410)
T ss_pred cCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCHHHHHH--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhHHHHHHHHhh
Q psy14428 544 ISSIREELKSKILD 557 (583)
Q Consensus 544 ~~~~~~~~~~~~~~ 557 (583)
+.+..+.++.+
T Consensus 368 ---li~~h~vyLl~ 378 (410)
T KOG1412|consen 368 ---LIENHKVYLLS 378 (410)
T ss_pred ---HHHhceEEEec
Confidence 56677666654
No 9
>KOG0257|consensus
Probab=100.00 E-value=1.3e-45 Score=369.06 Aligned_cols=302 Identities=15% Similarity=0.121 Sum_probs=263.9
Q ss_pred cCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCchhHHHH
Q psy14428 168 LGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISGSGSLRV 246 (583)
Q Consensus 168 l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~~~al~l 246 (583)
|+.|.++.+ +|+.+.+++.++..+....+|++..|.++||+++++.++..+|..+.++ +|+| |+|+++++.-
T Consensus 36 LgqGfp~~~-----~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlV--T~GA~~ai~~ 108 (420)
T KOG0257|consen 36 LGQGFPDFP-----PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLV--TAGANEAISS 108 (420)
T ss_pred ccCCCCCCC-----CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEE--ecCchHHHHH
Confidence 999999744 6789999999998876688999999999999999999999777666655 6999 9999999986
Q ss_pred HHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecc------cCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 247 GTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF------DNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 247 ~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~------d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
. +..++++||+|++.+|.|..|...++++|.+++.+++. ..+++.+|++.++.++ +++++++++||||
T Consensus 109 ~---~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~---t~kTk~Ii~ntPh 182 (420)
T KOG0257|consen 109 A---LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKI---TEKTKAIILNTPH 182 (420)
T ss_pred H---HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhc---cCCccEEEEeCCC
Confidence 4 45577779999999999999999999999999999984 2456889999999988 8899999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.++|++++++|+++|++||++||.||+|..+.|++ ..+..+.++++..+++|.++||||+||++|||+||+++
T Consensus 183 NPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~--~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~ig- 259 (420)
T KOG0257|consen 183 NPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG--NKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIG- 259 (420)
T ss_pred CCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC--CcceeeecCCchhheEEEeccccceeeeeeeeeeeeec-
Confidence 999999999999999999999999999999999999998 34677777788889999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
| +.++..+..++++..+.+++..|.+.+..+..++. +...+|.
T Consensus 260 -p-----~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~-----------------------~~~p~~~-------- 302 (420)
T KOG0257|consen 260 -P-----KHLYSALFPVHQNFVFTCPTPIQEASAAAFALELA-----------------------CLQPGGS-------- 302 (420)
T ss_pred -h-----HHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhh-----------------------ccCCcch--------
Confidence 7 68999999999999999999999999998876421 0001111
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.| +.++.+.|+++|+.|.+.|.+++ +....|++++|+|++++
T Consensus 303 ------y~---~~~~~~~y~~krdil~k~L~~lg----~~v~~p~gayyl~adfs 344 (420)
T KOG0257|consen 303 ------YF---ITELVKEYKEKRDILAKALEELG----LKVTGPEGAYYLWADFS 344 (420)
T ss_pred ------hH---HHHHHHHHHHHHHHHHHHHHhcC----CccccCCCceEEEEecc
Confidence 12 45577888999999999999986 56888999999999887
No 10
>PLN02368 alanine transaminase
Probab=100.00 E-value=3.4e-44 Score=379.90 Aligned_cols=328 Identities=16% Similarity=0.134 Sum_probs=257.1
Q ss_pred CCCCccccCCccccCC------C--------------CCC-----CCChHHHHHHHHHhcc-CCCCCCCCCCCCHHHHHH
Q psy14428 161 PHPKKMNLGVGAYRGE------D--------------GKP-----YVLPSVKEAERRIYEK-NLDHEYANIGGDAKFCKL 214 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~------~--------------~~p-----~~~~~v~~a~~~~~~~-~~~~~Y~~~~G~~~Lr~a 214 (583)
...++|+|++|+|+.. + +.| ++++.+.++...+... ....+|++..|.++||++
T Consensus 36 ~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~a 115 (407)
T PLN02368 36 EGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKE 115 (407)
T ss_pred HhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Confidence 4568899999999621 1 111 2556777776664322 235789999999999999
Q ss_pred HHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC-CCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCC
Q psy14428 215 AAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY-PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTN 293 (583)
Q Consensus 215 ia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~ 293 (583)
||+|+.+++|+.+++++|++ |+|+++++.++ +..++ ++||+|++++|+|+.|...++..|++++.+++..++++
T Consensus 116 ia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~---~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~ 190 (407)
T PLN02368 116 VAEFIERRDGYPSDPELIFL--TDGASKGVMQI---LNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENW 190 (407)
T ss_pred HHHHHHHhcCCCCChhhEEE--cccHHHHHHHH---HHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCC
Confidence 99999988899999999999 99999999985 34444 67999999999999999999999999999999333458
Q ss_pred CCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH
Q psy14428 294 GLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF 370 (583)
Q Consensus 294 g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~ 370 (583)
++|++.+++.+... ..++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.|++. .++.++.++
T Consensus 191 ~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~-~~~~s~~~~ 269 (407)
T PLN02368 191 GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDE-RPFISAKKV 269 (407)
T ss_pred CCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCcccHHHH
Confidence 99999999988532 12688999999999999999999999999999999999999999999999752 123344443
Q ss_pred HH-------hcCcEEEEecCcccc-cccCccceEEEEE-cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChh
Q psy14428 371 AK-------EVGQLCLAQSFSKNM-GLYGERVGTFSVL-TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK 441 (583)
Q Consensus 371 ~~-------~~~~vi~i~S~SK~~-~l~GlRiG~lv~~-~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 441 (583)
.. ..++||+++||||+| +|||||+||+++. .| +++++++.+... ...+++.++|.++..+++++.
T Consensus 270 ~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~-----~~li~~~~~~~~-~~~~~~~~~Q~aa~~~l~~~~ 343 (407)
T PLN02368 270 LMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP-----PKTVEEIYKVAS-IALSPNVSGQIFMGLMVNPPK 343 (407)
T ss_pred HhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC-----HHHHHHHHHHhc-ccCCCCcHHHHHHHHHhCCCC
Confidence 21 235899999999999 8999999999941 04 579999998753 456799999999999987531
Q ss_pred hhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q psy14428 442 LKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDH 521 (583)
Q Consensus 442 ~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~ 521 (583)
.. ......|.++++++++.|+++|+.+.+.|++. || +.+
T Consensus 344 ~~--------------------------------------~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~--~g-~~~ 382 (407)
T PLN02368 344 PG--------------------------------------DISYDQFVRESKGILESLRRRARMMTDGFNSC--KN-VVC 382 (407)
T ss_pred CC--------------------------------------CccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CC-eEe
Confidence 00 00012345566778889999999999999986 32 667
Q ss_pred ccccccceeec--CCChhhhhh
Q psy14428 522 ITNQKGMFCYT--GLSASQGMS 541 (583)
Q Consensus 522 ~~~~~g~f~~~--~l~~~~~~~ 541 (583)
..|+||||.|+ .++..-++.
T Consensus 383 ~~P~Gafy~~~~i~lp~~~~~~ 404 (407)
T PLN02368 383 NFTEGAMYSFPQIKLPPKAIEA 404 (407)
T ss_pred CCCCeeeEeccCCCCCHHHHHH
Confidence 88999999996 555555543
No 11
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=6.3e-44 Score=383.01 Aligned_cols=311 Identities=14% Similarity=0.099 Sum_probs=246.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
++.+.++++.|+|+.. + ..+++.+.+++.+...+...++|++..|.++||+++|+|+.+++|+.+++++|++ |+|+
T Consensus 30 ~g~~~~~~~~G~p~~~-~-~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G~ 105 (433)
T PRK06855 30 LGVKITWENIGDPIAK-G-EKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNGL 105 (433)
T ss_pred ccccccccccCCCccc-C-CCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCcH
Confidence 3457899999998431 1 1256788888887765544678999999999999999999998999999999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-hhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
++++.++ +. ++.+||.|++++|+|+.|.... ...|++++.+|+ ++ +++++|++.+++.+.. .++++++++||
T Consensus 106 ~~al~~~---~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~-~~~~~~~~d~~~l~~~~~~-~~~~~~i~l~~ 179 (433)
T PRK06855 106 GDAIAKI---YG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRL-DPENNWYPDLDDLENKVKY-NPSIAGILLIN 179 (433)
T ss_pred HHHHHHH---HH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEec-ccccCCCCCHHHHHHHHhc-CCCceEEEEEC
Confidence 9999885 33 4567999999999999987553 456899999998 53 4578999999988842 24578889999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.++|.+++++|+++|+++|++||+||+|.+|.|++ .+++++.++.. ..++|+++||||+|++||+|+||++
T Consensus 180 P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii 256 (433)
T PRK06855 180 PDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG--KKTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIE 256 (433)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEE
Confidence 99999999999999999999999999999999999999875 23456666532 2478999999999999999999999
Q ss_pred EEcCCc---hhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHH
Q psy14428 399 VLTPTS---DETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIV 475 (583)
Q Consensus 399 ~~~p~~---~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~ 475 (583)
+ |++ .....+++.+...+. ...+++.+.|.++.++++++.+
T Consensus 257 ~--p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~--------------------------------- 300 (433)
T PRK06855 257 V--YNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEY--------------------------------- 300 (433)
T ss_pred E--eCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcH---------------------------------
Confidence 8 531 111234444444433 3456889999999999876432
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.|.++|+.+.+.|++. +| +.+..|++|+|+|..+++
T Consensus 301 -------------~~~~~~~~~~~~~r~~~~~~~L~~~--~~-~~~~~p~gg~~~w~~l~~ 345 (433)
T PRK06855 301 -------------KNYLKERNKRYEKRSNIAYEKLKDV--PG-LKVNRTNGAFYMTVVFED 345 (433)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHhcC--CC-eeccCCCeeEEEeecccc
Confidence 2346667778889999999999764 44 667789999999998875
No 12
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.3e-43 Score=378.39 Aligned_cols=297 Identities=13% Similarity=0.133 Sum_probs=254.4
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~ 240 (583)
.++.|+|+.|.|+.+ +++.+.+++.+.+.+. ..+|++..|.++||+++++++++++|+.++++ +|++ |+|+
T Consensus 53 ~~~~i~l~~G~P~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~v--t~G~ 124 (413)
T PLN00175 53 KHGAINLGQGFPNFD-----GPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTV--TSGC 124 (413)
T ss_pred cCCeEecCCCCCCCC-----CCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCCH
Confidence 357899999999632 4578888888777653 57899999999999999999998889999998 7999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..++.+||+|++++|+|+.|...++..|++++.+++ +++++++|++.+++.+ .+++++++++|||
T Consensus 125 ~~al~~~---~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~~l~~~~---~~~~k~i~i~~p~ 197 (413)
T PLN00175 125 TEAIAAT---ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTL-RPPDFAVPEDELKAAF---TSKTRAILINTPH 197 (413)
T ss_pred HHHHHHH---HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEEC-CcccCCCCHHHHHHhc---CcCceEEEecCCC
Confidence 9999885 4455677999999999999999999999999999999 5555789999998877 4578899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.++|.+++++|+++|++++++||+||+|.++.+++ .+.++.++....+++|+++||||+|++||+|+||+++
T Consensus 198 NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~- 273 (413)
T PLN00175 198 NPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA- 273 (413)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcCcEEEEecchhhccCcchheeeeEe-
Confidence 999999999999999999999999999999999999865 2335555544457999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
| +++++.+.+.+.....++|.+.|.+++.+++++.
T Consensus 274 -~-----~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~--------------------------------------- 308 (413)
T PLN00175 274 -P-----PHLTWGVRQAHSFLTFATATPMQWAAVAALRAPE--------------------------------------- 308 (413)
T ss_pred -C-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCH---------------------------------------
Confidence 7 5899999998888888999999999999986521
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.+++++++.|.++|+.+.+.|++.+ +.+..+++|+|.|.+++
T Consensus 309 ---------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~g~~f~~~~~~ 350 (413)
T PLN00175 309 ---------SYYEELKRDYSAKKDILVEGLKEVG----FKVYPSSGTYFVMVDHT 350 (413)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecc
Confidence 1255667778889999999998864 45667899999998874
No 13
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.2e-43 Score=376.58 Aligned_cols=301 Identities=14% Similarity=0.072 Sum_probs=242.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
.+.+.++|+.|+++.. +++.+.+++.+........+|++..|.++||++||+|+.+.+|+.++++ +|++ |+|
T Consensus 28 ~~~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G 100 (388)
T PRK07366 28 AGKELIDLSLGSSDLP-----APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLP--LIG 100 (388)
T ss_pred cCCCeEEeCCCCCCCC-----CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEE--CCC
Confidence 4567899999998522 4577888887766544457899999999999999999998889999998 6999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++++.++ +..++++||+|++++|+|+.|...++..|++++.+|+ +++ .+.+|++.+++.+ .++++++++||
T Consensus 101 s~~al~~~---~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~~---~~~~k~i~l~~ 173 (388)
T PRK07366 101 SQEGTAHL---PLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPL-RAENDFLPVFADIPTEV---LAQARLMVLSY 173 (388)
T ss_pred cHHHHHHH---HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEEC-CCccCCCCCHHHHHHhh---cccceEEEEeC
Confidence 99999985 4557778999999999999999999999999999999 543 3567777777665 45678999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.++|.+++++|+++|++++++||+||+|.+|.+++. ...+++.++....+++|+++||||+||+||+|+||++
T Consensus 174 p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v 252 (388)
T PRK07366 174 PHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGE-VEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI 252 (388)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCC-CCCCChhhCCCCcccEEEEeecccccCCcchhheehc
Confidence 999999999999999999999999999999999999998752 1134555543334579999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHH-HHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHG-ARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
+ + +++++++.+.+.....+.++.. |.+++.+.++
T Consensus 253 ~--~-----~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~-------------------------------------- 287 (388)
T PRK07366 253 G--N-----AQLIQALRQVKAVVDFNQYRGILNGAIAALTGP-------------------------------------- 287 (388)
T ss_pred C--C-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc--------------------------------------
Confidence 8 7 5899999988776655554433 3333332221
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.+.++|+.+.+.|++.+ +.+..|++|+|.|..++.
T Consensus 288 -----------~~~l~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~~~~ 331 (388)
T PRK07366 288 -----------QATVQQTVQIFRQRRDAFINALHQIG----WPVPLPEATMYVWAKLPE 331 (388)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCc
Confidence 12366777888899999999998763 555678999999998864
No 14
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-43 Score=376.41 Aligned_cols=304 Identities=14% Similarity=0.140 Sum_probs=244.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
.+++.++|+.|.|+.+ +++.+.+++.+........+|++..|.++||+++|+|+.+.+|+.++++ +|++ |+|
T Consensus 31 ~~~~~~~l~~g~p~~~-----~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~i--t~G 103 (403)
T PRK08636 31 AGEDIIDFSMGNPDGP-----TPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVA--TMG 103 (403)
T ss_pred cCCCEEEcCCcCCCCC-----CCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--CCC
Confidence 3467899999988632 2344444444433333367899999999999999999998889999998 7999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhH----HHHHHcCCCCcEEE
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGM----MEDIKAMPERSILF 314 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l----~~~l~~~~~~~~~i 314 (583)
+++++.++ +..++++||+|++++|+|+.+...++..|++++++|+ +. +++++|++.+ ++.+++...+++++
T Consensus 104 ~~~al~~~---~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i 179 (403)
T PRK08636 104 SKEGYVHL---VQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPL-EYNEDFELDEDQFFENLEKALRESSPKPKYV 179 (403)
T ss_pred hHHHHHHH---HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEec-cccccCccChhhhhhHHHHHHhhccCCceEE
Confidence 99999985 5567788999999999999999999999999999998 43 3478998765 44443334678999
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi 394 (583)
+++|||||||.++|.+++++|+++|++|+++||+||+|.+|.+++ ...+++.++....+++|+++||||+||+||+|+
T Consensus 180 ~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRi 257 (403)
T PRK08636 180 VVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG--YKTPSILEVEGAKDVAVESYTLSKSYNMAGWRV 257 (403)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC--CCCCChhcCCCccccEEEEEecccccCCcccee
Confidence 999999999999999999999999999999999999999999875 234455554333467899999999999999999
Q ss_pred eEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhH
Q psy14428 395 GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARI 474 (583)
Q Consensus 395 G~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i 474 (583)
||+++ | +++++++.+.+.....+++.+.|.++..++++.
T Consensus 258 G~iv~--~-----~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~---------------------------------- 296 (403)
T PRK08636 258 GFVVG--N-----KKLVGALKKIKSWLDYGMFTPIQVAATIALDGD---------------------------------- 296 (403)
T ss_pred eeeeC--C-----HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCc----------------------------------
Confidence 99998 7 589999998877666777888888776555321
Q ss_pred HHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 475 VTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 475 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 297 --------------~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~g~~~~~~l~~ 340 (403)
T PRK08636 297 --------------QSCVEEIRETYRKRRDVLIESFANAG----WELQKPRASMFVWAKIPE 340 (403)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCcceEEEEECCC
Confidence 12356677778889999999998853 556788999999998864
No 15
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-43 Score=374.63 Aligned_cols=300 Identities=14% Similarity=0.139 Sum_probs=248.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G 239 (583)
..++.++|+.|.++.. +++.+.+++.+........+|+ ..|.++||++||+|+.+++|+.+++ ++|++ |+|
T Consensus 30 ~~~~~i~l~~g~p~~~-----~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G 101 (399)
T PRK07681 30 AGHKMIDLSIGNPDMP-----PADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLL--LMG 101 (399)
T ss_pred cCCCeEEeCCCCCCCC-----CCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEE--CCC
Confidence 3567899999988522 4577888888776543344565 5899999999999999889999998 89999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++++.++ +..++.+||+|++++|+|+.|...++..|++++.+|+ +++ ++.+|++.+++.+ .+++++++++|
T Consensus 102 ~~~al~~~---~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~~---~~~~k~v~l~~ 174 (399)
T PRK07681 102 SQDGLVHL---PMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPL-KKENDFLPDLELIPEEI---ADKAKMMILNF 174 (399)
T ss_pred cHHHHHHH---HHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEec-CCCCCCcCCHHHHHHhc---cccceEEEEeC
Confidence 99999985 4456778999999999999999999999999999999 543 4667899888776 45788999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.+++.+++++|+++|++++++||+||+|.+|.+++ ....++.++....+++|+++||||+||+||+|+||++
T Consensus 175 P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i 252 (399)
T PRK07681 175 PGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDG--NKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMI 252 (399)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCC--CCCCChhhCCCCcccEEEEeecccccCCccceeEEEe
Confidence 99999999999999999999999999999999999999875 2334555543344689999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ | +++++++.+.+.....+++.+.|.++..+++++.
T Consensus 253 ~--~-----~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~------------------------------------- 288 (399)
T PRK07681 253 G--N-----EEIVRALTQFKSNTDYGVFLPIQKAACAALRNGA------------------------------------- 288 (399)
T ss_pred c--C-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH-------------------------------------
Confidence 8 7 5899999988877778899999999999887631
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 289 -----------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~~g~f~~~~l~~ 331 (399)
T PRK07681 289 -----------AFCEKNRGIYQERRDTLVDGFRTFG----WNVDKPAGSMFVWAEIPK 331 (399)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeeEEEEECCC
Confidence 1234455666788888888888753 556678999999998864
No 16
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-43 Score=373.97 Aligned_cols=300 Identities=16% Similarity=0.178 Sum_probs=245.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
.++.++|+.|.++.. +++.+.++..+.... ....|+++.|.++||+++|+|+.+++|+.+++++|++ |+|++
T Consensus 28 ~~~~i~l~~g~p~~~-----~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~i--t~G~~ 99 (384)
T PRK06348 28 FPDIIDLSLGDPDLI-----TDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMA--TVGAC 99 (384)
T ss_pred cCCcEEcCCCCCCCC-----CCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEE--cCChH
Confidence 356799999988532 335555543333322 2578999999999999999999988899999999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++++||+|++++|+|..|...++..|++++.+|+.+++++++|++.+++.+ .+++++++++||||
T Consensus 100 ~al~~~---~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~---~~~~~~v~l~~p~N 173 (384)
T PRK06348 100 HGMYLA---LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALI---TSKTKAIILNSPNN 173 (384)
T ss_pred HHHHHH---HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhh---CcCccEEEEeCCCC
Confidence 999985 445667799999999999999999999999999999843445679999998877 45678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.++|.+++++|+++|++++++||+||+|.+|.+++ ...++.++....+++|+++||||++|+||+|+||+++
T Consensus 174 PtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~-- 248 (384)
T PRK06348 174 PTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIA-- 248 (384)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecchhccCCccccceeeec--
Confidence 99999999999999999999999999999999999864 2334555433357999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
| +++++.+.+.+.....++|.+.|.++..++.+.
T Consensus 249 ~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----------------------------------------- 282 (384)
T PRK06348 249 P-----DYIIETAKIINEGICFSAPTISQRAAIYALKHR----------------------------------------- 282 (384)
T ss_pred C-----HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCc-----------------------------------------
Confidence 7 589999998888777789999999998887541
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.++++++.+.+.|+.. +| +.+..+++|+|.|..++.
T Consensus 283 -------~~~~~~~~~~~~~r~~~~~~~L~~~--~~-~~~~~p~gg~~~~~~~~~ 327 (384)
T PRK06348 283 -------DTIVPLIKEEFQKRLEYAYKRIESI--PN-LSLHPPKGSIYAFINIKK 327 (384)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceeccCCeeEEEEEeccc
Confidence 1124456666778888888888764 33 556778999999987753
No 17
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-42 Score=369.64 Aligned_cols=316 Identities=13% Similarity=0.120 Sum_probs=244.9
Q ss_pred hhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC
Q psy14428 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK 228 (583)
Q Consensus 149 ~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~ 228 (583)
++..+...+..+.++++|+|+.|+|+.. +...+++.+.+++.+........+|+|..|.++||++||+|+.+++|+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~i~l~~G~p~~~-~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~ 96 (409)
T PLN00143 18 AVKFLKENFNEDDHRLAISFGFGDPSCF-ECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLS 96 (409)
T ss_pred HHHHHHHhcccCCCCceeeCCCCCCCCC-CCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC
Confidence 3444443444567889999999999621 112256788888887776544567999999999999999999998899999
Q ss_pred CCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 229 DNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 229 ~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
+++|++ |+|+++++.++ +..++.+||.|++++|+|+.|...++..|++++.+++.+++++.+|++.+++.+ .
T Consensus 97 ~~~I~i--t~G~~~al~~~---~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~---~ 168 (409)
T PLN00143 97 PDDVYL--TLGCKHAAEII---IKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIA---D 168 (409)
T ss_pred HhhEEE--ecChHHHHHHH---HHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhc---c
Confidence 999999 99999999995 455677899999999999999999999999999999833345778999998776 4
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 309 ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
+++++++++|||||||.+++.+++++|+++|++++++||+||+|.+|.+++ ....++..+ +..++||+++||||+|+
T Consensus 169 ~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~--~~~~~~~~~-~~~~~vi~~~SfSK~f~ 245 (409)
T PLN00143 169 ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGS--KPFVPMGLF-ASIVPVITLGSISKRWM 245 (409)
T ss_pred cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCC--CCCcchhhh-cccCcEEEEccchhhcC
Confidence 567889999999999999999999999999999999999999999999875 233344444 34568999999999999
Q ss_pred ccCccceEEEEEcCCchhHH---HHHHHHHHHHhccccCCChHHHHHHHHHhCC---hhhhhhhhhHHHHHHHHHHHHhh
Q psy14428 389 LYGERVGTFSVLTPTSDETE---RIMSQLKILIRGFYSNPPIHGARIVTEILSD---PKLKAQCDETERIMSQLKILIRG 462 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~---~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~~r~ 462 (583)
+||+|+||+++ ++++... .+++.+.+.... ...++.+.|.++..++++ +.++++.+..++.++.+...++.
T Consensus 246 ~pGlRvG~~v~--~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 322 (409)
T PLN00143 246 IPGWGLGWLVT--CDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE 322 (409)
T ss_pred CCccceEEEEe--eCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998 6432000 123344433322 334688999999999975 35666666666555555444443
Q ss_pred c--cC--CCccchhhHHHHhc
Q psy14428 463 F--YS--NPPIHGARIVTEIL 479 (583)
Q Consensus 463 ~--~~--~~p~~g~~i~~~~l 479 (583)
. .. ..|.+|+|+|.++.
T Consensus 323 ~~~~~~~~~p~gg~f~w~~l~ 343 (409)
T PLN00143 323 IPCIMCPQKAEGAFFALVKLN 343 (409)
T ss_pred CCCCCCCCCCCeeEEEEEecc
Confidence 2 22 35778999999875
No 18
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-42 Score=370.70 Aligned_cols=297 Identities=18% Similarity=0.170 Sum_probs=240.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G~ 240 (583)
..+.++|+.|.++. . .+++.+.+++.+........+|++..|.++||++|++++.+.+|+.+++ ++|++ |+|+
T Consensus 38 ~~~~i~l~~g~~~~-~---~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~i--t~Ga 111 (405)
T PRK06207 38 PGRPVDFSHGDVDA-H---EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELII--TPGT 111 (405)
T ss_pred CCCceecCCcCCCC-C---CCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCCc
Confidence 34678999999862 1 2446777776666644335679999999999999999999888988998 99999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEeccc----CCCCCCChhhHHHHHHcCCCCcEEEEe
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD----NKTNGLDFAGMMEDIKAMPERSILFLQ 316 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d----~~~~g~d~~~l~~~l~~~~~~~~~i~i 316 (583)
++++.++ +..++.+||+|++++|+|+.+...++..|++++.+++ + ++++++|++.+++.+ .++++++++
T Consensus 112 ~~al~~~---~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~-~~~~~~~~~~~d~~~l~~~~---~~~~k~v~l 184 (405)
T PRK06207 112 QGALFLA---VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQL-DYLSADKRAGLDLDQLEEAF---KAGVRVFLF 184 (405)
T ss_pred HHHHHHH---HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEec-cccCcccCCCcCHHHHHHhh---hhcCeEEEE
Confidence 9999985 5556778999999999999999999999999999998 4 124789999998887 456789999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceE
Q psy14428 317 TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396 (583)
Q Consensus 317 ~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~ 396 (583)
+|||||||.+++.+++++|+++|++++++||+||+|.+|.|++. +.+++.++....+++|+++||||+|++||+|+||
T Consensus 185 ~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ 262 (405)
T PRK06207 185 SNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPIDPENVITIMGPSKTESLSGYRLGV 262 (405)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCCCcCcEEEEecchhhccCcccceEE
Confidence 99999999999999999999999999999999999999998762 3334444323357999999999999999999999
Q ss_pred EEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHHHHHhh--ccC-CCccch
Q psy14428 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD--PKLKAQCDETERIMSQLKILIRG--FYS-NPPIHG 471 (583)
Q Consensus 397 lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~~r~--~~~-~~p~~g 471 (583)
+++ | +++++++.+.......+.+.+.|.++..++++ ++++++++..++....+...++. .+. .+|.+|
T Consensus 263 ii~--~-----~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg 335 (405)
T PRK06207 263 AFG--S-----PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAG 335 (405)
T ss_pred EEc--C-----HHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCee
Confidence 998 7 58999999988888888899999999999976 34555554444333333333332 234 457789
Q ss_pred hhHHHHhcC
Q psy14428 472 ARIVTEILS 480 (583)
Q Consensus 472 ~~i~~~~l~ 480 (583)
+|+|+++..
T Consensus 336 ~fl~~~l~~ 344 (405)
T PRK06207 336 SYLFPRLPR 344 (405)
T ss_pred EEEEEeCcc
Confidence 999998753
No 19
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.7e-42 Score=373.64 Aligned_cols=313 Identities=13% Similarity=0.116 Sum_probs=250.6
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
...+++|+|+.|+|+.. +.+.+++.+.+++.+.+..+...+|.+..|.++||++||+|+++++++.+++++|++ |+|
T Consensus 63 ~~~~~vi~l~~Gdp~~~-p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~i--t~G 139 (462)
T PLN02187 63 DVNKTILPLGHGDPSVY-PCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFL--TAG 139 (462)
T ss_pred CCCCCeEECCCCCCCCC-CCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEE--eCC
Confidence 45678999999988632 223355678888877776554678999999999999999999988899999999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..++++||+|++++|+|+.|...++..|++++.+++.+++++++|++.+++.+ .+++++++++||
T Consensus 140 ~~~al~~~---~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~---~~~~~~v~i~nP 213 (462)
T PLN02187 140 CNQGIEIV---FESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIA---DENTVAMVVINP 213 (462)
T ss_pred HHHHHHHH---HHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhc---CCCcEEEEEeCC
Confidence 99999985 455677899999999999999999999999999999843346899999998776 567889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++++++||+||+|.+|.|++ .+..++..+. ...+||+++||||+|++||||+||+++
T Consensus 214 ~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~--~~~~s~~~~~-~~~~vi~l~SfSK~f~~pGlRiG~~v~ 290 (462)
T PLN02187 214 NNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGD--NPFVSMGKFA-SIVPVLTLAGISKGWVVPGWKIGWIAL 290 (462)
T ss_pred CCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCceeHHHhc-cCCcEEEEecchhhcCCccceeEEEEe
Confidence 9999999999999999999999999999999999999975 2334555543 235799999999999999999999998
Q ss_pred EcCCchhHHHHHHHHHHHHhcccc--CCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYS--NPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
++++..-++++.+...+..... +++.+.|.++..++++..
T Consensus 291 --~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~------------------------------------ 332 (462)
T PLN02187 291 --NDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD------------------------------------ 332 (462)
T ss_pred --cCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc------------------------------------
Confidence 6542111245577666665544 568999999999886411
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.++++++++.+.++|+.+.+.|++. |+......|++|+|.|..++
T Consensus 333 -----------~~~l~~~~~~l~~~r~~l~~~L~~~--~~~~~~~~P~gg~fl~~~l~ 377 (462)
T PLN02187 333 -----------KNFFAKKNKILKHNVDLVCDRLKDI--PCVVCPKKPESCTYLLTKLE 377 (462)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhhC--CCCcCCCCCCEeEEEEeecC
Confidence 1235566677788999999999874 32222346899999998765
No 20
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.4e-42 Score=368.36 Aligned_cols=301 Identities=17% Similarity=0.171 Sum_probs=247.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
..++.++|+.|.|+.+ +++.+.+++.+........+|+|..|.++||+++|+|+.+.+|++++++ +|++ |+|
T Consensus 30 ~~~~~i~l~~~~p~~~-----~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~i--t~G 102 (389)
T PRK08068 30 EGHDVINLGQGNPDQP-----TPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAI--LFG 102 (389)
T ss_pred cCCCeEEecCCCCCCC-----CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEE--cCC
Confidence 4567899999987532 3466788877766544456899999999999999999988889889998 8999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++++.++ +..++.+||+|++++|+|+.|...++..|++++.+|+ +++ ++.+|++.+++.+ .+++++++++|
T Consensus 103 ~~~~l~~~---~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~-~~~~~~~~d~~~l~~~~---~~~~~~v~l~~ 175 (389)
T PRK08068 103 GKAGLVEL---PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPL-IAENNFLPDYTKIPEEV---AEKAKLMYLNY 175 (389)
T ss_pred cHHHHHHH---HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeec-ccccCCCCCHHHHHHhc---cccceEEEEEC
Confidence 99999884 4556778999999999999999999999999999999 543 4667888888776 45688999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.++|.+++++|+++|++++++||+||+|.+|.+++ ..+.++....+..+++|+++||||+||+||+|+||++
T Consensus 176 P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~ 253 (389)
T PRK08068 176 PNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDG--QKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAV 253 (389)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCC--CCCcChhhCCCccCCEEEEecchhccCCccceeEeEe
Confidence 99999999999999999999999999999999999998864 1233333323345689999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ + +++++++.+.......+++.+.|.++..++.++.
T Consensus 254 ~--~-----~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~------------------------------------- 289 (389)
T PRK08068 254 G--N-----ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQ------------------------------------- 289 (389)
T ss_pred c--C-----HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcH-------------------------------------
Confidence 8 6 5899999988777666777778888877775421
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 290 -----------~~~~~~~~~~~~~r~~~~~~L~~~g----~~~~~~~g~~~~~v~~~~ 332 (389)
T PRK08068 290 -----------SCVAELVARYESRRNAFISACREIG----WEVDAPKGSFFAWMPVPK 332 (389)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeeEEEEEECCC
Confidence 2255667777889999999998864 556678999999988764
No 21
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=2.1e-42 Score=376.03 Aligned_cols=298 Identities=16% Similarity=0.135 Sum_probs=237.8
Q ss_pred hHHHHHHHHHhcc--CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC-CCCCE
Q psy14428 184 PSVKEAERRIYEK--NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY-PGVKT 260 (583)
Q Consensus 184 ~~v~~a~~~~~~~--~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~-~~gd~ 260 (583)
..+.+++.++... .....|++..|.++||++||+|+.+++|+.+++++|++ |+|+++++.++ +..++ ++||.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~---~~~l~~~~gD~ 165 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFL--TDGASSGIKLL---LQLLIGDPSDG 165 (481)
T ss_pred HHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEE--cCCHHHHHHHH---HHHhccCCCCE
Confidence 3445555555443 13467999999999999999999998999999999999 99999999995 44455 67999
Q ss_pred EEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q psy14428 261 VYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLA 336 (583)
Q Consensus 261 Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~ 336 (583)
|++++|+|+.|...++..|++++.+++ ++ +++++|++.+++.+... ..++++++++|||||||.++|.+++++|+
T Consensus 166 Vlv~~P~y~~y~~~~~~~g~~~v~v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~ 244 (481)
T PTZ00377 166 VMIPIPQYPLYSAAITLLGGKQVPYYL-DEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEII 244 (481)
T ss_pred EEECCCCchhHHHHHHHcCCEEEEEEe-ccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHH
Confidence 999999999999999999999999999 54 45789999999988532 12678888899999999999999999999
Q ss_pred HHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH----Hh---cCcEEEEecCccc-ccccCccceEEEEEc-CCchhH
Q psy14428 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA----KE---VGQLCLAQSFSKN-MGLYGERVGTFSVLT-PTSDET 407 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~----~~---~~~vi~i~S~SK~-~~l~GlRiG~lv~~~-p~~~~~ 407 (583)
++|++++++||+||+|.++.|++. .+..++.++. .. ..++|+++||||+ +++||||+||+++.. |
T Consensus 245 ~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p----- 318 (481)
T PTZ00377 245 KFCYEKGIVLMADEVYQENIYDGE-KPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP----- 318 (481)
T ss_pred HHHHHCCCEEEEehhhHhhccCCC-CCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC-----
Confidence 999999999999999999998531 1333443321 11 1379999999998 599999999999621 3
Q ss_pred HHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHH
Q psy14428 408 ERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQ 487 (583)
Q Consensus 408 ~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~ 487 (583)
+++++++.+.+. ...+++.++|.++..+++++... ......
T Consensus 319 ~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~--------------------------------------~~~~~~ 359 (481)
T PTZ00377 319 PEVREQIYKLAS-INLCSNVVGQLMTGLMCNPPREG--------------------------------------DASYPL 359 (481)
T ss_pred HHHHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCC--------------------------------------cccHHH
Confidence 589999998774 45579999999999999753110 001234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 488 WFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 488 ~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
|.+++++++.+++++|+.+.+.|++. || +.+..|++|+|.|..++
T Consensus 360 ~~~~~~~~~~~~~~rr~~l~~~L~~~--~g-~~~~~p~gg~fl~~~~~ 404 (481)
T PTZ00377 360 YKRERDAIFTSLKRRAELLTDELNKI--EG-VSCQPVEGAMYAFPRIE 404 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--CC-cEeecCCeeEEEEeecc
Confidence 56667777888899999999999875 33 67788999999997653
No 22
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-42 Score=364.47 Aligned_cols=302 Identities=15% Similarity=0.085 Sum_probs=247.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
..++.++|+.|+++.. +++.+.+++.+.........|++..|.++||+++++|+++.+|+.++++ +|++ |+|
T Consensus 29 ~~~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~--t~G 101 (385)
T PRK09276 29 RGVDVISLGIGDPDLP-----TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVIS--LIG 101 (385)
T ss_pred cCCCEEEecCCCCCCC-----CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccC
Confidence 3567899999987522 4578888888776543357899999999999999999998888888887 5888 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..++++||+|++++|+|+.|...++..|++++.+|+.+++++.+|++.+++.+ .+++++++++||
T Consensus 102 ~~~~i~~~---~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~---~~~~~~v~l~~p 175 (385)
T PRK09276 102 SKEGIAHI---PLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDV---AKKAKLMFINYP 175 (385)
T ss_pred cHHHHHHH---HHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhc---cccceEEEEeCC
Confidence 99999985 455677899999999999999999999999999999832334557888887766 457889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++++++||+||+|.+|.+++ ...+++.++.+..+++|+++||||.||+||+|+||+++
T Consensus 176 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~ 253 (385)
T PRK09276 176 NNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDG--YKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG 253 (385)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCC--CCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC
Confidence 9999999999999999999999999999999999999865 23445555433346899999999999999999999998
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.+.+.....+++.+.|.++..++++.
T Consensus 254 --~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--------------------------------------- 287 (385)
T PRK09276 254 --N-----ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGP--------------------------------------- 287 (385)
T ss_pred --C-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCc---------------------------------------
Confidence 7 589999998877677778888888888887541
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..+++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 288 ---------~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~~~~~~~v~~~~ 331 (385)
T PRK09276 288 ---------QEVVEELRKIYQERRDILVEGLRKLG----LEVEPPKATFYVWAPVPK 331 (385)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEECCC
Confidence 12245667777888999999998753 456678899999998764
No 23
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-42 Score=366.39 Aligned_cols=298 Identities=17% Similarity=0.127 Sum_probs=245.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC-CCCC-CeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA-FKDN-RLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~-~~~~-~I~i~~t~ 238 (583)
++...++|+.|+++.. +++.+.+++.+.........|++ .|.++||+++|+|+.+.+|+. ++++ +|++ |+
T Consensus 42 ~~~~~i~L~~g~p~~~-----~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i--t~ 113 (410)
T PRK06290 42 PDMELIDMGVGEPDEM-----ADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIH--SI 113 (410)
T ss_pred CCCCeEEcCCCCCCCC-----CCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEE--cc
Confidence 4456899999998632 45677777766554333456864 999999999999999888988 9997 7999 99
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeC
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQT 317 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~ 317 (583)
|+++++.++ +..++++||+|++++|+|+.|...++..|++++.+|+ +++ ++.+|++.+++.+ ..++++++++
T Consensus 114 Gs~~al~~~---~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~-~~~~~~~~d~~~l~~~~---~~~~k~i~l~ 186 (410)
T PRK06290 114 GSKPALAML---PSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPL-LEENNFLPDLDSIPKDI---KEKAKLLYLN 186 (410)
T ss_pred CHHHHHHHH---HHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEec-CCCcCCcCCHHHHHHhh---cccceEEEEE
Confidence 999999985 4556778999999999999999999999999999999 543 4667888888777 4578899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
|||||||.+++.+++++|+++|++++++||+||+|.++.+++ .+.++.++.+..+++|+++||||.||+||+|+||+
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~---~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~i 263 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG---KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFV 263 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC---CCcChhcCCCccccEEEEeechhhcCCchhheEeE
Confidence 999999999999999999999999999999999999998865 22344444333467899999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
++ | +++++.+.+.+.....+++.++|.++..+++++.
T Consensus 264 i~--~-----~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~------------------------------------ 300 (410)
T PRK06290 264 VG--N-----ELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPE------------------------------------ 300 (410)
T ss_pred Ee--C-----HHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcH------------------------------------
Confidence 99 7 5899999988887778888899999988887631
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
| ++++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 301 ----------~---~~~~~~~~~~~~~~l~~~L~~~g----~~~~~p~g~f~l~v~lp~ 342 (410)
T PRK06290 301 ----------I---TEKIREKYSRRLDKLVKILNEVG----FKAEMPGGTFYLYVKAPK 342 (410)
T ss_pred ----------H---HHHHHHHHHHHHHHHHHHHHhCC----CeecCCCeeeEEEEECCC
Confidence 1 33455666788888889888764 556678999999988764
No 24
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=4.1e-42 Score=366.33 Aligned_cols=302 Identities=14% Similarity=0.123 Sum_probs=246.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
.+++.++|+.|.++.. +++.+.+++.+........+|+++.|.++||+++|+++++++|+.++++ +|++ |+|
T Consensus 28 ~~~~~i~l~~~~p~~~-----~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G 100 (405)
T PRK09148 28 AGADIIDLGMGNPDLP-----TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVA--TLG 100 (405)
T ss_pred cCCCeEEcCCCCCCCC-----CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCC
Confidence 4567899999987521 3566777777666444457899999999999999999998888889998 8999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..++++||+|++++|+|+.|...++..|++++.+|+ +.++ .+++.+++.++...+++++++++||
T Consensus 101 ~~~al~~~---~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~-~~~~--~~~~~l~~~~~~~~~~~~~v~l~~P 174 (405)
T PRK09148 101 SKEGFANM---AQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPA-EPDE--EFFPALERAVRHSIPKPIALIVNYP 174 (405)
T ss_pred hHHHHHHH---HHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeC-CCCC--CCccCHHHHHhhccccceEEEEeCC
Confidence 99999985 4556778999999999999999999999999999998 4432 2345566666544567899999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.++|.+++++|+++|++++++||+||+|.+|.+++ ...+++.++....+++|+++||||+||+||+|+||+++
T Consensus 175 ~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~--~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~ 252 (405)
T PRK09148 175 SNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDG--NPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG 252 (405)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCC--CCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC
Confidence 9999999999999999999999999999999999999865 23344544432346789999999999999999999998
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.+.+.....+++.+.|.++..+++++
T Consensus 253 --~-----~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~--------------------------------------- 286 (405)
T PRK09148 253 --N-----ERLIAALTRVKSYLDYGAFTPIQVAATAALNGP--------------------------------------- 286 (405)
T ss_pred --C-----HHHHHHHHHHHHHhccCCChHHHHHHHHHHhCc---------------------------------------
Confidence 7 689999999887777788999999998888642
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 287 ---------~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~f~~~~l~~ 330 (405)
T PRK09148 287 ---------QDCIAEMRELYKKRRDVLVESFGRAG----WDIPPPAASMFAWAPIPE 330 (405)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHcC----CccCCCCeeEEEEEECCC
Confidence 11255667777889999999998754 445678999999988764
No 25
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=6.3e-42 Score=362.77 Aligned_cols=301 Identities=16% Similarity=0.096 Sum_probs=248.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
.+++.++|+.|+++.. +++.+.+++.+.......++|+++.|.++||+++|+|+.+.+|+.++++ +|++ |+|
T Consensus 27 ~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~--t~G 99 (383)
T TIGR03540 27 EGVDVISLGIGDPDLP-----TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLS--LIG 99 (383)
T ss_pred cCCCeEEeCCCCCCCC-----CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEE--CCC
Confidence 4578899999987522 4577888877766543457899999999999999999998888888887 6999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++++.++ +..++.+||.|++++|+|+.+...++..|++++.+|+ +++ ++.+|++.+++.+ .+++++++++|
T Consensus 100 ~~~~l~~~---~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~-~~~~g~~~d~~~l~~~~---~~~~~~v~i~~ 172 (383)
T TIGR03540 100 SKEGIAHI---PLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPL-KEENGFLPDFDAIPEDI---AKKAKLMFINY 172 (383)
T ss_pred cHHHHHHH---HHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEec-CcccCCccCHHHHHhhc---cccceEEEEeC
Confidence 99999985 4556778999999999999999999999999999999 543 4567898988776 45788999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.+++.+++++|+++|++++++||+||+|.++.+++ ...+++.++....+++|+++||||+||+||+|+||++
T Consensus 173 P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i 250 (383)
T TIGR03540 173 PNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDG--YKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAV 250 (383)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCC--CCCcCcccCCCcccCEEEEEecccccCCccceeeEEe
Confidence 99999999999999999999999999999999999999865 2334454432234689999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ + +++++++.........+++.+.|.++..++++.
T Consensus 251 ~--~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-------------------------------------- 285 (383)
T TIGR03540 251 G--N-----ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP-------------------------------------- 285 (383)
T ss_pred C--C-----HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC--------------------------------------
Confidence 8 7 589999988877667788889999888887652
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 286 ----------~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~~~~~~l~~ 329 (383)
T TIGR03540 286 ----------QDVVKEIRKIYQRRRDLLLEALKKIG----IDVEKPKATFYVWVPVPE 329 (383)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHhCC----CEecCCCcceEEEEECCC
Confidence 11245566777888999999998864 556678899999998864
No 26
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=7.2e-42 Score=363.85 Aligned_cols=297 Identities=13% Similarity=0.102 Sum_probs=242.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC-CCCC-CeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA-FKDN-RLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~-~~~~-~I~i~~t~ 238 (583)
.+.+.++|+.|+++.. +++.+.+++.+.... ..+|++..|.++||++||+|+.+++|+. ++++ +|++ |+
T Consensus 27 ~~~~~i~l~~~~p~~~-----~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~i--t~ 97 (396)
T PRK09147 27 ADLPPISLSIGEPKHP-----TPAFIKDALAANLDG--LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLP--VN 97 (396)
T ss_pred cCCCeEecCCCCCCCC-----CCHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEE--CC
Confidence 4678899999998632 457888887776542 5789999999999999999999888988 8985 9999 99
Q ss_pred CchhHHHHHHHHHHHhCCC---CCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEE
Q psy14428 239 SGSGSLRVGTAFLERFYPG---VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~---gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
|+++++.++ +..++.+ ||.|++++|+|+.|...++..|++++.+|+ ++ +++++|++.+++.+ .++++++
T Consensus 98 G~~~al~~~---~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~-~~~~~~~~d~~~l~~~~---~~~~k~i 170 (396)
T PRK09147 98 GSREALFAF---AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNC-DPANNFAPDFDAVPAEV---WARTQLL 170 (396)
T ss_pred ChHHHHHHH---HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEecc-CccccCccCHHHHHHHH---hhccEEE
Confidence 999999985 5567777 899999999999999999999999999999 54 35789999998876 3468899
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH-HHHHH----HhcCcEEEEecCcccccc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS-LRYFA----KEVGQLCLAQSFSKNMGL 389 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~-~~~~~----~~~~~vi~i~S~SK~~~l 389 (583)
++||||||||.++|.+++++|+++|++++++||+||+|.++.+++. .+..+ +.... +..++||+++||||.|++
T Consensus 171 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 249 (396)
T PRK09147 171 FVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEA-APPLGLLEAAAELGRDDFKRLVVFHSLSKRSNV 249 (396)
T ss_pred EEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCC-CCCchhhhhccccCccccccEEEEeccccccCC
Confidence 9999999999999999999999999999999999999999998752 11212 22211 124799999999999999
Q ss_pred cCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCcc
Q psy14428 390 YGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPI 469 (583)
Q Consensus 390 ~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~ 469 (583)
||+|+||+++ | +++++++.+.......+++.+.|.++...+.+.
T Consensus 250 ~GlRiG~~~~--~-----~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~----------------------------- 293 (396)
T PRK09147 250 PGLRSGFVAG--D-----AALLKKFLLYRTYHGCAMPPAVQAASIAAWNDE----------------------------- 293 (396)
T ss_pred ccceeeeecC--C-----HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcch-----------------------------
Confidence 9999999998 7 589999988776666788889998876665431
Q ss_pred chhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 470 HGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 470 ~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
+++++.++.++++|+.+.+.|++. +.+..|++|+|.|..++
T Consensus 294 --------------------~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~p~~g~f~~~~~~ 334 (396)
T PRK09147 294 --------------------AHVRENRALYREKFDAVTPILAPV-----LDVQLPDAGFYLWAKVP 334 (396)
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCCeeEEEEEECC
Confidence 124555667778888888888763 23567899999999886
No 27
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.2e-41 Score=363.15 Aligned_cols=325 Identities=15% Similarity=0.106 Sum_probs=256.2
Q ss_pred hhhHhhcccc-ccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC
Q psy14428 148 KPLKQQLKGF-NKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA 226 (583)
Q Consensus 148 ~~i~~l~~~~-~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~ 226 (583)
+.++.++... .+..+.+.|+|++|+|+.. ....+++.+.+++.+.+......+|+|..|.++||++++++++..+|+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~ 93 (409)
T PLN02656 15 GILSLLMESIDDEENGKRVISLGMGDPTAY-SCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYK 93 (409)
T ss_pred hHHHHHHHhccccccCCeeeecCCCCCCcC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 3445444332 2335678999999999622 1122568888888887765446789999999999999999999888999
Q ss_pred CCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 227 FKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 227 ~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
+++++|++ |+|+++++.++ +..++.+||+|++++|+|+.|...++..|++++.+|+.+++++++|++.+++.+
T Consensus 94 ~~~~~i~~--t~G~~~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~-- 166 (409)
T PLN02656 94 LSLDDVFI--TSGCTQAIDVA---LSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALA-- 166 (409)
T ss_pred CCcccEEE--eCChHHHHHHH---HHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHh--
Confidence 99999999 99999999985 344567799999999999999999999999999999832335678999998877
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
.+++++++++|||||||.+++.+++++|+++|++++++||+||+|.+|.|++ ....++.++ +..++||+++||||+
T Consensus 167 -~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~~~~vi~~~SfSK~ 242 (409)
T PLN02656 167 -DQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGS--NPFVPMGVF-GSIVPVLTLGSLSKR 242 (409)
T ss_pred -ccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC--CCcccHHHh-cccCcEEEEcccchh
Confidence 4568889999999999999999999999999999999999999999999976 233455554 445689999999999
Q ss_pred ccccCccceEEEEEcCCchh---HHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc
Q psy14428 387 MGLYGERVGTFSVLTPTSDE---TERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF 463 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~---~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~ 463 (583)
|++||+|+||+++ |+++. -+++++++.+.... ..+++.+.|.++..++++..
T Consensus 243 f~~pGlRiG~~i~--~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~---------------------- 297 (409)
T PLN02656 243 WIVPGWRLGWFVT--TDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILEQTD---------------------- 297 (409)
T ss_pred ccCcceeEEEEEE--eCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCc----------------------
Confidence 9999999999999 64210 03688888876553 45788999999999986421
Q ss_pred cCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 464 YSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 464 ~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+.++++++++.++|+.+.+.|++. ++......|++|+|.|..++.
T Consensus 298 -------------------------~~~~~~~~~~~~~~r~~~~~~L~~~--~~~~~~~~p~gg~~~w~~l~~ 343 (409)
T PLN02656 298 -------------------------ESFFKKTINILKQSSDICCDRIKEI--PCITCPHKPEGSMAVMVKLNL 343 (409)
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHhhC--CCCcCCcCCCeEEEEEEecch
Confidence 0124455666778899999999874 222123568999999998753
No 28
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.9e-42 Score=370.70 Aligned_cols=306 Identities=15% Similarity=0.196 Sum_probs=240.3
Q ss_pred CCC-CccccCCccccCCCCCCCCChHHHHHHHHHhcc-----------CCCCCCCCCCCCHHHHHHHHHHHhCCCC--CC
Q psy14428 161 PHP-KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-----------NLDHEYANIGGDAKFCKLAAQLAYGEDF--PA 226 (583)
Q Consensus 161 ~~~-~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~ 226 (583)
.+| +.|+|+.+++. .+.+.+.+.+...... .....|++..|.++||++||+|+.+.++ +.
T Consensus 35 ~~p~g~i~L~~~En~------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~ 108 (468)
T PLN02450 35 KNPSGIIQMGLAENQ------LSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVT 108 (468)
T ss_pred cCCCeeEEeehhHhH------hhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCC
Confidence 344 67999998873 2335555555443210 1234599999999999999999988766 45
Q ss_pred CCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-hcCCeEEEEecccCCCCCCChhhHHHHHH
Q psy14428 227 FKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 227 ~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
+++++|++ |+|+++++.++ +..++.+||.|++++|+|+.|...+. ..|++++++|+.+++++.+|++.+++.++
T Consensus 109 v~~~~Iii--t~Ga~~al~~l---~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~ 183 (468)
T PLN02450 109 FDPNKLVL--TAGATSANETL---MFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQ 183 (468)
T ss_pred cChHHeEE--ccChHHHHHHH---HHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHH
Confidence 79999999 99999999985 55677889999999999999998888 58999999998324456778888888775
Q ss_pred cC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH--------hc
Q psy14428 306 AM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK--------EV 374 (583)
Q Consensus 306 ~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~--------~~ 374 (583)
+. ..+++++++||||||||.+++.+++++|+++|++++++||+||+|.++.|++. +..++.+..+ ..
T Consensus 184 ~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~~~~ 261 (468)
T PLN02450 184 QAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENTDVS 261 (468)
T ss_pred HHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccCCCC
Confidence 42 34788899999999999999999999999999999999999999999988752 3334333221 25
Q ss_pred CcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHH
Q psy14428 375 GQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMS 454 (583)
Q Consensus 375 ~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 454 (583)
++|++++||||.|++||+|+||+++ ++ +.+++.+.+.. ...++|.++|.+++.+++++.+.+
T Consensus 262 ~~vi~l~S~SK~~~l~GlRiG~li~--~~----~~l~~~~~~~~--~~~~~s~~~Q~a~~~~L~~~~~~~---------- 323 (468)
T PLN02450 262 NRVHIVYSLSKDLGLPGFRVGAIYS--ND----EMVVSAATKMS--SFGLVSSQTQYLLSALLSDKKFTK---------- 323 (468)
T ss_pred CcEEEEEeccccCCCCCccEEEEEE--CC----HHHHHHHHHHh--hcCCCCHHHHHHHHHHhCCchhHH----------
Confidence 7899999999999999999999999 74 35677666553 334678999999999998743221
Q ss_pred HHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCC
Q psy14428 455 QLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGL 534 (583)
Q Consensus 455 ~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l 534 (583)
.+++++++++.++|+.+.+.|++.+ +.+..+++|+|+|.++
T Consensus 324 -----------------------------------~~l~~~~~~l~~rr~~l~~~L~~~g----i~~~~~~~g~flwi~l 364 (468)
T PLN02450 324 -----------------------------------NYLEENQKRLKQRQKKLVSGLEAAG----IKCLKSNAGLFCWVDM 364 (468)
T ss_pred -----------------------------------HHHHHHHHHHHHHHHHHHHHHHHcC----CcccCCCceEEEEEEc
Confidence 1255667788899999999998874 4567799999999887
Q ss_pred Ch
Q psy14428 535 SA 536 (583)
Q Consensus 535 ~~ 536 (583)
+.
T Consensus 365 ~~ 366 (468)
T PLN02450 365 RH 366 (468)
T ss_pred hH
Confidence 63
No 29
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-42 Score=362.89 Aligned_cols=301 Identities=15% Similarity=0.168 Sum_probs=243.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCC-eEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNR-LAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~-I~i~~t~G 239 (583)
.+++.++|+.|.|+.+ +++.+.++..+.........|+++.|.++||+++|+|+++++++.+++++ |++ |+|
T Consensus 33 ~g~~~i~l~~g~p~~~-----~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v--t~G 105 (394)
T PRK05942 33 QGLDLIDLGMGNPDGA-----APQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP--LLG 105 (394)
T ss_pred cCCCeEEcCCCCCCCC-----CCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE--ccC
Confidence 3456899999987532 33444444443333333578999999999999999999988888899984 999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++++.++ +..++.+||+|++++|+|+.+...+...|++++.+|+ +++ ++++|++.+++.+ .+++++++++|
T Consensus 106 ~~~al~~~---~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~~---~~~~k~i~l~~ 178 (394)
T PRK05942 106 SKEGLTHL---ALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIIL-KPENDWLIDLSSIPEEV---AQQAKILYFNY 178 (394)
T ss_pred hHHHHHHH---HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeec-CCccCCccCHHHHHHhc---cccceEEEEcC
Confidence 99999985 4456777999999999999999999999999999999 543 4678999998877 46789999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.+++.+++++|+++|++++++||+||+|.++.+++. ...++.++.+..+++|+++||||+||+||+|+||++
T Consensus 179 P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~ 256 (394)
T PRK05942 179 PSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVV 256 (394)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCCccccEEEEecchhccCChhhheeeee
Confidence 999999999999999999999999999999999999998652 234454443334578999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ + ++++++++..+.....+++.++|.++..+++..
T Consensus 257 ~--~-----~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~-------------------------------------- 291 (394)
T PRK05942 257 G--N-----RHIIQGLRTLKTNLDYGIFSALQKAAETALQLP-------------------------------------- 291 (394)
T ss_pred c--C-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc--------------------------------------
Confidence 8 6 589999998887777788899999888887531
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 292 ----------~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~~~~f~~~~~~~ 335 (394)
T PRK05942 292 ----------DSYLQQVQERYRTRRDFLIQGLGELG----WNIPPTKATMYLWVPCPV 335 (394)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeeEEEEECCC
Confidence 12345566777888888989887753 456678899999988763
No 30
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=4.8e-42 Score=363.09 Aligned_cols=296 Identities=18% Similarity=0.179 Sum_probs=247.5
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~~ 241 (583)
++.|+|+.|+++.. +++.+.+++.+..... ..+|++..|.++||+++|+++.+.+|+.++++ +|++ |+|++
T Consensus 20 ~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 91 (378)
T PRK07682 20 EGVISLGVGEPDFV-----TPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV--TVGAS 91 (378)
T ss_pred CCeEEeCCCCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 46899999998632 3456777776665432 56799999999999999999998888888886 8999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+++.++ +..++++||+|++++|+|+.|...++..|++++.+++ +. +++++|++.+++.+ .+++++++++|||
T Consensus 92 ~al~~~---~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~---~~~~~~v~~~~p~ 164 (378)
T PRK07682 92 QALDVA---MRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVAT-TLENEFKVQPAQIEAAI---TAKTKAILLCSPN 164 (378)
T ss_pred HHHHHH---HHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeec-CCccCCCCCHHHHHhhc---CcccEEEEEECCC
Confidence 999985 4556778999999999999999999999999999998 43 35789999998877 4578888899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|++++++||+||+|.++.+++ +..++..+.+..+++|+++||||.|++||+|+||+++
T Consensus 165 NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~- 240 (378)
T PRK07682 165 NPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE---AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA- 240 (378)
T ss_pred CCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC---CCCChhhcccccCCEEEEecCcccccChhhhhhhhhc-
Confidence 999999999999999999999999999999999999875 2334444444457899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++.+.......++|.+.|.++..+++++.
T Consensus 241 -~-----~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~--------------------------------------- 275 (378)
T PRK07682 241 -P-----VYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGN--------------------------------------- 275 (378)
T ss_pred -C-----HHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh---------------------------------------
Confidence 7 5899999988777777889999999999887531
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.+++++++.++++|+.+.+.|++.+ +.+..+++|+|.|..++
T Consensus 276 ---------~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~p~g~~~~~~~~~ 317 (378)
T PRK07682 276 ---------DDVIRMRDSYRKRRNFFVTSFNEIG----LTCHVPGGAFYAFPSIS 317 (378)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHCC----CccCCCCeeEEEEEecc
Confidence 1145566677889999999998864 45667899999998764
No 31
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.9e-42 Score=369.95 Aligned_cols=274 Identities=17% Similarity=0.185 Sum_probs=225.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCC--CCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDF--PAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~ 276 (583)
...|.+..|.++||++||+|+.+.+| +.+++++|++ |+|++++++++ +..+++|||.|++++|+|+.|...++
T Consensus 87 ~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivi--t~Ga~~al~~l---~~~l~~pGD~Vlv~~P~Y~~~~~~~~ 161 (496)
T PLN02376 87 IANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVM--SGGATGANETI---MFCLADPGDVFLIPSPYYAAFDRDLR 161 (496)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEE--ccchHHHHHHH---HHHhCCCCCEEEECCCCccchHHHHH
Confidence 35688999999999999999998877 7799999999 99999999985 55677889999999999999999887
Q ss_pred -hcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccC
Q psy14428 277 -DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY 352 (583)
Q Consensus 277 -~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y 352 (583)
..|++++++|+...+++++|++.+++++++. ..++++++++|||||||.+++.+++++|+++|++++++||+||+|
T Consensus 162 ~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY 241 (496)
T PLN02376 162 WRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIY 241 (496)
T ss_pred hhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCc
Confidence 5899999999932345889999998765432 357888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHh-------cCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCC
Q psy14428 353 LGLTSGDFDKDAFSLRYFAKE-------VGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNP 425 (583)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~~-------~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~ 425 (583)
.++.|++ .++.++.++... .+++++++||||.||+||+|+||+++ ++ +.+++.+++.. ....+
T Consensus 242 ~~~~f~~--~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~--~~----~~l~~~~~~~~--~~~~v 311 (496)
T PLN02376 242 AATVFAG--GDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYS--FN----DSVVSCARKMS--SFGLV 311 (496)
T ss_pred cccccCC--CCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEE--CC----HHHHHHHHHHh--hcCCC
Confidence 9999876 245566665321 14678899999999999999999999 75 35666665443 33468
Q ss_pred ChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy14428 426 PIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREE 505 (583)
Q Consensus 426 s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~ 505 (583)
|.+.|.+++.+++++.+. .++++++++++.++|+.
T Consensus 312 s~~~Q~a~~~~L~d~~~~---------------------------------------------~~~l~~~r~~l~~r~~~ 346 (496)
T PLN02376 312 SSQTQLMLASMLSDDQFV---------------------------------------------DNFLMESSRRLGIRHKV 346 (496)
T ss_pred CHHHHHHHHHHhCChhHH---------------------------------------------HHHHHHHHHHHHHHHHH
Confidence 899999999999874320 23466777888899999
Q ss_pred HHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 506 LKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 506 l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+.+.|++.+ +.+..+++|+|+|.+++.
T Consensus 347 l~~~L~~~g----i~~~~~~aG~flwi~l~~ 373 (496)
T PLN02376 347 FTTGIKKAD----IACLTSNAGLFAWMDLRH 373 (496)
T ss_pred HHHHHHHCC----CcccCCCceEEEEEEchh
Confidence 999998764 456778999999998864
No 32
>PLN02231 alanine transaminase
Probab=100.00 E-value=2.7e-41 Score=368.13 Aligned_cols=316 Identities=16% Similarity=0.155 Sum_probs=249.0
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-C-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-N-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
+..++.|+++.+.+. +|.+.+.++...+... + ...+|+++.|.++||++||+|+.+++|+++++++|++ |
T Consensus 126 ~~~p~~i~~~~~~~~------fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T 197 (534)
T PLN02231 126 CDHPSLLDKSETHGL------FSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--T 197 (534)
T ss_pred ccCCccCCCCCcccc------CCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--e
Confidence 456788999865543 2345666665433322 2 3577999999999999999999998999999999999 9
Q ss_pred CCchhHHHHHHHHHHHhC-CCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCC---CCcE
Q psy14428 238 ISGSGSLRVGTAFLERFY-PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMP---ERSI 312 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~---~~~~ 312 (583)
+|+++++.++ +..++ ++||.|++++|+|+.|...++..|++++++++ +++ ++++|++.+++.++... .+++
T Consensus 198 ~Ga~~ai~~~---~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l-~~~~~~~~d~~~Le~~l~~~~~~~~~~k 273 (534)
T PLN02231 198 DGASPAVHMM---MQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYL-DEATGWGLEISELKKQLEDARSKGITVR 273 (534)
T ss_pred CCHHHHHHHH---HHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEec-CcccCCCCCHHHHHHHHHHHhhcCCCeE
Confidence 9999999995 44455 46999999999999999999999999999999 543 58999999999886431 2678
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH------hcCcEEEEecCccc
Q psy14428 313 LFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK------EVGQLCLAQSFSKN 386 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~------~~~~vi~i~S~SK~ 386 (583)
+++++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. ..+.++.++.. ...++|+++||||.
T Consensus 274 ~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~ 352 (534)
T PLN02231 274 ALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKG 352 (534)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCcc
Confidence 889999999999999999999999999999999999999999999631 23445655432 12369999999997
Q ss_pred c-cccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccC
Q psy14428 387 M-GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYS 465 (583)
Q Consensus 387 ~-~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~ 465 (583)
+ |+||+|+||+++ ++.+ +++++++.+.+. ...+++.+.|.++..+++.+..
T Consensus 353 ~~g~pGlRiGy~~~--~~~~--~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~----------------------- 404 (534)
T PLN02231 353 YYGECGKRGGYMEV--TGFT--SDVREQIYKVAS-VNLCSNISGQILASLVMSPPKP----------------------- 404 (534)
T ss_pred cccCCccceEEEEE--ecCC--HHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCC-----------------------
Confidence 6 899999999998 4211 578999988765 4567788889888888864210
Q ss_pred CCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCC
Q psy14428 466 NPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGL 534 (583)
Q Consensus 466 ~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l 534 (583)
.+ .....|.++.+++++.|.++++.+.+.|+++ +| +.+..++||||.|.++
T Consensus 405 --------------~~-~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~--~g-i~~~~p~Ggfylw~~l 455 (534)
T PLN02231 405 --------------GD-ESYESYMAEKDGILSSLARRAKTLEDALNSL--EG-VTCNKAEGAMYLFPRI 455 (534)
T ss_pred --------------Cc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceecCCCeeeEEeccc
Confidence 00 0113345556677888899999999999875 33 6778899999999654
No 33
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=361.22 Aligned_cols=297 Identities=19% Similarity=0.186 Sum_probs=248.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
..++.++|+.|.++.. +++.+.+++.+..... ..+|.+..|.++||+++|+++.+++|+.+++++|++ |+|+
T Consensus 30 ~~~~~i~l~~g~~~~~-----~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G~ 101 (387)
T PRK08960 30 AGHDVIHLEIGEPDFT-----TAEPIVAAGQAALAAG-HTRYTAARGLPALREAIAGFYAQRYGVDVDPERILV--TPGG 101 (387)
T ss_pred cCCCeEEeCCCCCCCC-----CCHHHHHHHHHHHhcC-CCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE--ccCc
Confidence 4567899999998522 4678888888777543 467999999999999999999988899999999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++++.++ +..++++||+|++++|+|+.+...++..|.+++.+|+ +++ ++++|++.+++.+ .+++++++++||
T Consensus 102 ~~al~~~---~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~~---~~~~~~i~i~~p 174 (387)
T PRK08960 102 SGALLLA---SSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPV-GPDSRYQLTPALVERHW---NADTVGALVASP 174 (387)
T ss_pred HHHHHHH---HHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEec-CcccCCCCCHHHHHHHh---CccceEEEEECC
Confidence 9999985 4456677999999999999999999999999999998 543 4678999998876 566788899999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++++++||+||+|.++.+++ +..++.. ..+++|+++||||+||+||+|+||+++
T Consensus 175 ~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~---~~~~~~~---~~~~vi~~~S~SK~~g~~GlRiG~~~~ 248 (387)
T PRK08960 175 ANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV---DAASVLE---VDDDAFVLNSFSKYFGMTGWRLGWLVA 248 (387)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCChhh---ccCCEEEEeecccccCCcccEEEEEEc
Confidence 9999999999999999999999999999999999998864 2223322 346899999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
| +++++++.+.......++|.+.|.++..++.+.
T Consensus 249 --~-----~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--------------------------------------- 282 (387)
T PRK08960 249 --P-----PAAVPELEKLAQNLYISASTPAQHAALACFEPE--------------------------------------- 282 (387)
T ss_pred --C-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC---------------------------------------
Confidence 7 589999998887778889999999988887541
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-ccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDH-ITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~-~~~~~g~f~~~~l~~ 536 (583)
+.++++++++.+.++|+.+.+.|++.+ +.. ..+++|+|.|..++.
T Consensus 283 --------~~~~l~~~~~~~~~~~~~l~~~L~~~~----~~~~~~p~g~~f~~~~~~~ 328 (387)
T PRK08960 283 --------TLAILEARRAEFARRRDFLLPALRELG----FGIAVEPQGAFYLYADISA 328 (387)
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHHHHhcC----CcCCcCCCeeEEEEEeccc
Confidence 112356667777888999999998754 322 468899999988754
No 34
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4.8e-41 Score=359.96 Aligned_cols=307 Identities=15% Similarity=0.153 Sum_probs=246.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+.+.|+|+.|+|+.. +...+++.+.+++.+.+.......|++..|.++||+++|+++..+++..+++++|++ |+|++
T Consensus 51 ~~~~i~l~~G~P~~~-~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDPSAF-PCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGCA 127 (430)
T ss_pred CCCeeeCCCCCCCCC-CCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCHH
Confidence 568999999998521 222356788888887776544568999999999999999999998999999999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+|+.++ +..+.++||+|++++|+|+.|...+...|++++.+++..++++++|++.+++.+ .+++++++++||||
T Consensus 128 ~al~l~---~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~---~~~~~~i~i~~P~N 201 (430)
T PLN00145 128 QAIEII---MSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALA---DENTVAMVIINPNN 201 (430)
T ss_pred HHHHHH---HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHh---CcCceEEEEeCCCC
Confidence 999985 445667899999999999999999999999999998733345789999998876 56789999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++++++||+||+|.+|.|++ .+..++..+ +..++||+++||||+|++||||+||+++
T Consensus 202 PtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~--~~~~~~~~~-~~~~~vi~~~S~SK~~~~pG~RlG~iv~-- 276 (430)
T PLN00145 202 PCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS--KPFVPMGVF-GEVAPVLTLGSISKRWVVPGWRLGWIAT-- 276 (430)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCC--CCccchhhh-cccCcEEEEeccccccCCCCeeEEEEEE--
Confidence 99999999999999999999999999999999999875 234455554 3357899999999999999999999998
Q ss_pred CCchhHHHHH------HHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHH
Q psy14428 402 PTSDETERIM------SQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIV 475 (583)
Q Consensus 402 p~~~~~~~li------~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~ 475 (583)
+++. .++ +.+.... ....+++.+.|.++..++++..
T Consensus 277 ~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~---------------------------------- 318 (430)
T PLN00145 277 CDPN---GILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTK---------------------------------- 318 (430)
T ss_pred ecch---hhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCH----------------------------------
Confidence 5332 333 3343332 3445678899999988876410
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-ccccccceeecCCCh
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDH-ITNQKGMFCYTGLSA 536 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~-~~~~~g~f~~~~l~~ 536 (583)
.++++++++.++++|+.+.+.|++. +| +.+ ..|++|+|.|+.++.
T Consensus 319 -------------~~~~~~~~~~~~~~~~~~~~~L~~~--~g-~~~~~~P~ga~y~~v~l~~ 364 (430)
T PLN00145 319 -------------EEFFTKTLGLLKETADICYEKIKEI--KC-ITCPHKPEGSMFVMVKLDL 364 (430)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHhcC--CC-CCCCcCCCeeeEEEeccCh
Confidence 1124556667788899999999774 33 333 469999999998864
No 35
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.2e-41 Score=360.39 Aligned_cols=297 Identities=15% Similarity=0.211 Sum_probs=247.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G~ 240 (583)
.++.|+|+.|.++. + +++.+.+++.+..... ..+|+|..|.++||+++++++.+.+|+.+++ ++|++ |+|+
T Consensus 28 ~~~~i~l~~g~p~~--~---~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~i--t~g~ 99 (384)
T PRK12414 28 QHDALNLSQGAPNF--A---PDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTV--IASA 99 (384)
T ss_pred hCCeEEcCCCCCCC--C---CCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ECCh
Confidence 45689999999852 1 4678888887766543 4779999999999999999999888888776 68999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ +++++.+|++.+++.+ .+++++++++|||
T Consensus 100 ~~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l---~~~~~~v~i~~p~ 172 (384)
T PRK12414 100 SEGLYAA---ISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKL-SPEDFRVNWDEVAAAI---TPRTRMIIVNTPH 172 (384)
T ss_pred HHHHHHH---HHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEec-CccccccCHHHHHhhc---CcccEEEEEcCCC
Confidence 9999985 4456677999999999999999999999999999998 5555789999998877 4578899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.++|.+++++|+++|++++++||+||+|.++.|++. ...++.++.+..+++|+++||||.||+||+|+||+++
T Consensus 173 NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~- 249 (384)
T PRK12414 173 NPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA--RHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLA- 249 (384)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC--CccCcccCcCccCcEEEEecccccccCccceEEEEec-
Confidence 9999999999999999999999999999999999998752 2334444333356899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
| +++++++.+.+.....++|.+.|.++..+++++..
T Consensus 250 -~-----~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~-------------------------------------- 285 (384)
T PRK12414 250 -P-----AELMDEIRKVHQFMVFSADTPMQHAFAEALAEPAS-------------------------------------- 285 (384)
T ss_pred -C-----HHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChH--------------------------------------
Confidence 7 58999999988877889999999999998876321
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
| .++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..++
T Consensus 286 -------~----~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~gg~~~~~~~~ 325 (384)
T PRK12414 286 -------Y----LGLGAFYQRKRDLLARELAGSR----FELLPSEGSFFMLARFR 325 (384)
T ss_pred -------H----HHHHHHHHHHHHHHHHHHHhCC----CeecCCCcceEEEEccc
Confidence 1 1234456788888889988753 55667899999998764
No 36
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=4.1e-41 Score=358.60 Aligned_cols=309 Identities=14% Similarity=0.125 Sum_probs=246.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+++.++|+.|+|+.+ +...+++.+.+++.+........+|.|..|.++||+++|+++.+. +..+++++|++ |+|++
T Consensus 30 ~~~~i~l~~g~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~~~i~~--t~G~~ 105 (401)
T TIGR01264 30 EKPMIKLSIGDPTVF-GNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIEADDVVL--CSGCS 105 (401)
T ss_pred CCCeeecCCCCCCCc-CCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCHHHEEE--CcChH
Confidence 356799999999632 122356888888887776543567999999999999999999874 56789999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++.+||+|++++|+|..|...++..|++++.+++..++++++|++.+++.+ .+++++++++||||
T Consensus 106 ~al~~~---~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~---~~~~~~v~~~~p~N 179 (401)
T TIGR01264 106 HAIEMC---IAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLI---DEKTAALIVNNPSN 179 (401)
T ss_pred HHHHHH---HHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHh---ccCceEEEEcCCCC
Confidence 999985 445667799999999999999999999999999999832335789999998877 34678889999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++++++||+||+|.+|.+++ ....++.++. ...+||+++||||+|++||+|+||+++
T Consensus 180 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~iv~-- 254 (401)
T TIGR01264 180 PCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSG--ATFEPLASLS-STVPILSCGGLAKRWLVPGWRLGWIII-- 254 (401)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCC--cccccHHHcC-CCCcEEEEccCcccCCCccceEEEEEe--
Confidence 99999999999999999999999999999999999875 2344555542 234699999999999999999999999
Q ss_pred CCch-hHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 402 PTSD-ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 402 p~~~-~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
++++ ...++++.+.+... ...+++.+.|.++..++++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~--------------------------------------- 294 (401)
T TIGR01264 255 HDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTP--------------------------------------- 294 (401)
T ss_pred cCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCc---------------------------------------
Confidence 6421 11245555555433 356788999999988886410
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.+.++|+.+.+.|+++ || +.+..|++|+|.|..++.
T Consensus 295 --------~~~l~~~~~~~~~~r~~l~~~L~~~--~~-~~~~~p~~g~f~~~~~~~ 339 (401)
T TIGR01264 295 --------QEYFDGTLSVLESNAMLCYGALAAV--PG-LRPVMPSGAMYMMVGIEM 339 (401)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHhC--CC-CcccCCCeeeEEEEEecc
Confidence 1235566777788999999999885 44 666789999999998753
No 37
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.8e-41 Score=364.63 Aligned_cols=288 Identities=14% Similarity=0.143 Sum_probs=233.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
..++|+.|.++.+ +++.+.+++.+.... ...|+++.|.++||+++++|++...+ .+++|++ |+|++++
T Consensus 86 ~~i~L~~g~p~~~-----~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iii--t~G~~~a 153 (431)
T PRK15481 86 PLHDLAGGNPDPQ-----RLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDL--TSGAIDA 153 (431)
T ss_pred hhhhhhcCCCChh-----HhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEE--ecCcHHH
Confidence 4678988877532 334577776665432 45799999999999999999976432 3579999 9999999
Q ss_pred HHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEe-CCCCCC
Q psy14428 244 LRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQ-TSSHNP 322 (583)
Q Consensus 244 l~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i-~~p~NP 322 (583)
+.++ +..++.+||.|++++|+|+.|...++..|++++.+|+ |+ .++|++.+++.+. ++++++++ ||||||
T Consensus 154 l~~~---~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~--~g~~~~~l~~~~~---~~~k~i~~~p~p~NP 224 (431)
T PRK15481 154 IERL---LCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSV-DA--EGMQPEKLERALA---QGARAVILTPRAHNP 224 (431)
T ss_pred HHHH---HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeecc-CC--CCCCHHHHHHHHh---cCCCEEEECCCCCCC
Confidence 9985 5566778999999999999999999999999999999 54 3789999988874 34555555 599999
Q ss_pred CCCCCCHHHHHHHHHHHHhc-CeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 323 TGVDLSEDQWRQLAVVVKQR-HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~-~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
||.++|.+++++|+++|+++ +++||+||+|.+|.+++. .+.+ . ...+++|+++||||+|+ ||+|+||+++
T Consensus 225 TG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~---~~~~-~--~~~~~vi~~~SfSK~~~-~GlRiG~~i~-- 295 (431)
T PRK15481 225 TGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY---HSVI-P--QTTQRWALIRSVSKALG-PDLRLAFVAS-- 295 (431)
T ss_pred CCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC---CCCC-c--CCCCCEEEEeeeccccC-CCceeEEEeC--
Confidence 99999999999999999999 999999999999987531 1111 1 13469999999999999 9999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
| +++++++.+.......++|.+.|.+++.+++++.
T Consensus 296 ~-----~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~---------------------------------------- 330 (431)
T PRK15481 296 D-----SATSARLRLRLNSGTQWVSHLLQDLVYACLTDPE---------------------------------------- 330 (431)
T ss_pred C-----HHHHHHHHHHHhccccCCCHHHHHHHHHHHhCcc----------------------------------------
Confidence 7 5889999876666666789999999999998743
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
|.++++++++.+.++|+.+.+.|++.+ +.+..|++|+|.|..++.
T Consensus 331 ------~~~~l~~~~~~~~~~r~~~~~~L~~~~----~~~~~p~gg~f~~~~l~~ 375 (431)
T PRK15481 331 ------YQARLAQARLFYAQRRQKLARALQQYG----IAIPSPGDGLNLWLPLDT 375 (431)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHcC----CccccCCCeEEEEEECCC
Confidence 334466777888899999999998864 445679999999998864
No 38
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.5e-41 Score=359.98 Aligned_cols=297 Identities=13% Similarity=0.138 Sum_probs=248.8
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~~ 241 (583)
.+.|+|+.|.++.. +++.+.+++.+..... ..+|++..|.++||+++++++.+.+++.++++ +|++ |+|++
T Consensus 30 ~~~i~l~~g~~~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~--t~G~~ 101 (386)
T PRK09082 30 HGAINLSQGFPDFD-----GPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITV--TAGAT 101 (386)
T ss_pred CCEEEecCCCCCCC-----CCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCHH
Confidence 46799999988532 3567788877776543 46799999999999999999998888888876 8999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+++ +++++++|++.+++.+ .++++++++++|||
T Consensus 102 ~al~~~---~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~---~~~~~~v~l~~p~N 174 (386)
T PRK09082 102 EALFAA---ILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVAL-QPPDFRVDWQRFAAAI---SPRTRLIILNTPHN 174 (386)
T ss_pred HHHHHH---HHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccccCCHHHHHHhc---CccceEEEEeCCCC
Confidence 999985 4445677999999999999999999999999999999 6556889999998887 45788999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++++++||+||+|.++.+++ ....++.++....+++|+++||||.||+||+|+||+++
T Consensus 175 PtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~-- 250 (386)
T PRK09082 175 PSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDG--AGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA-- 250 (386)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCC--CCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC--
Confidence 99999999999999999999999999999999999875 23345555433457999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
| +++++.+++.+.....++|.+.|.+++.++++.
T Consensus 251 ~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----------------------------------------- 284 (386)
T PRK09082 251 P-----AALSAEFRKVHQYNTFTVNTPAQLALADYLRAE----------------------------------------- 284 (386)
T ss_pred C-----HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCC-----------------------------------------
Confidence 7 589999999888778889999999998887531
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.++++++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..++
T Consensus 285 -------~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~~g~~~~~~~~~ 327 (386)
T PRK09082 285 -------PEHYLELPAFYQAKRDRFRAALANSR----FKLLPCEGTYFQLVDYS 327 (386)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCeeEEEEEecc
Confidence 01244556667888888999988753 55677899999998875
No 39
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=6.3e-41 Score=355.32 Aligned_cols=298 Identities=17% Similarity=0.221 Sum_probs=247.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~ 240 (583)
.++.++|+.|.+.. .+++.+.+++.+..... ...|++..|.++||+++|+++.+++|+.++++ +|++ |+|+
T Consensus 27 ~~~~i~l~~~~p~~-----~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~--t~G~ 98 (387)
T PRK07683 27 YDNLISLTIGQPDF-----PTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIV--TIGA 98 (387)
T ss_pred cCCeEEecCCCCCC-----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCh
Confidence 45779999998752 14577888888877643 57899999999999999999998888989998 9999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++|+.++ +..++.+||+|++++|+|..|...++..|++++.+++ +++++.+|.+.+++.+ .+++++++++|||
T Consensus 99 ~~al~~~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~---~~~~~~i~i~~p~ 171 (387)
T PRK07683 99 SEAIDIA---FRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDT-RSTGFRLTAEALENAI---TEKTRCVVLPYPS 171 (387)
T ss_pred HHHHHHH---HHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeec-CcccCCCCHHHHHHhc---CcCceEEEEeCCC
Confidence 9999985 4445667999999999999999999999999999998 5555666778888776 4567899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|++++++||+||+|.++.+++ +..++.++.+..+++|+++||||+||+||+|+||+++
T Consensus 172 NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~- 247 (387)
T PRK07683 172 NPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ---PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA- 247 (387)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC---CcCChhhccCCcCCeEEEeeccccccCccceeEEEEc-
Confidence 999999999999999999999999999999999998865 2334555434457899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++.+.......+++.+.|.++..++.++.
T Consensus 248 -~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--------------------------------------- 282 (387)
T PRK07683 248 -P-----SYLAKHILKVHQYNVTCASSISQYAALEALTAGK--------------------------------------- 282 (387)
T ss_pred -C-----HHHHHHHHHHHHhccCCCChHHHHHHHHHHhCCh---------------------------------------
Confidence 7 5899999987766667788899999988886532
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+++++++++.++|+.+.+.|.+.+ +.+..+++|+|.|..++.
T Consensus 283 ---------~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~ 325 (387)
T PRK07683 283 ---------DDAKMMRHQYKKRRDYVYNRLISMG----LDVEKPTGAFYLFPSIGH 325 (387)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHcC----CcccCCCeeEEEEEeccc
Confidence 1244556667788888888887753 556678999999987653
No 40
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.8e-41 Score=356.00 Aligned_cols=297 Identities=15% Similarity=0.064 Sum_probs=241.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC--CCCC-CeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA--FKDN-RLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~--~~~~-~I~i~~t 237 (583)
.+.+.++|+.|+++.. +++.+.+++.+.... ...|+++.|.++||+++|+|+.+.++++ ++++ +|++ |
T Consensus 26 ~~~~~i~l~~~~p~~~-----~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~i--t 96 (393)
T TIGR03538 26 ASKPPIALSIGEPKHP-----TPAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLP--V 96 (393)
T ss_pred cCCCeEEecCCCCCCC-----CCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEE--C
Confidence 4578899999998632 467888888876542 5789999999999999999999888876 7885 8999 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCCE--EEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEE
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKT--VYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~--Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
+|+++++.++ +..++++||+ |++++|+|+.|...++..|++++.+|+ +++ ++.+|++.+++++ .++++++
T Consensus 97 ~Ga~~al~~~---~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~~---~~~~k~i 169 (393)
T TIGR03538 97 NGTREALFAF---AQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNC-TAENGFLPDFDAVPESV---WRRCQLL 169 (393)
T ss_pred CCcHHHHHHH---HHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeec-cccCCCCCCHHHHHHHH---hhcceEE
Confidence 9999999985 4556677986 999999999999999999999999999 433 4677888898877 3467888
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH-HHHHH----HhcCcEEEEecCcccccc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS-LRYFA----KEVGQLCLAQSFSKNMGL 389 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~-~~~~~----~~~~~vi~i~S~SK~~~l 389 (583)
+++|||||||.+++.+++++|+++|++++++||+||+|.++.+++. ....+ +..+. +..+++|+++||||.|++
T Consensus 170 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~ 248 (393)
T TIGR03538 170 FVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEG-NPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL 248 (393)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCC-CCCcCHHHhcccccccccccEEEEecchhhcCC
Confidence 8999999999999999999999999999999999999999988641 11222 22211 134689999999999999
Q ss_pred cCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCcc
Q psy14428 390 YGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPI 469 (583)
Q Consensus 390 ~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~ 469 (583)
||+|+||+++ | +++++++.+.......+++.+.|.++...+.+.
T Consensus 249 ~GlRvG~~i~--~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----------------------------- 292 (393)
T TIGR03538 249 PGLRSGFVAG--D-----AEILKAFLRYRTYHGCAMPIPTQLASIAAWNDE----------------------------- 292 (393)
T ss_pred cccceEEEec--C-----HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcCh-----------------------------
Confidence 9999999999 7 579999988877666778889998877666431
Q ss_pred chhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 470 HGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 470 ~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
+++++.++.++++|+.+.+.|++.. .+..+++|+|.|..++
T Consensus 293 --------------------~~~~~~~~~~~~~~~~~~~~L~~~~-----~~~~p~gg~f~~~~~~ 333 (393)
T TIGR03538 293 --------------------QHVRENRALYREKFAAVLEILGQVL-----DLELPDAGFYLWPKVP 333 (393)
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHHHhhC-----cccCCCeeEEEEEECC
Confidence 1245556667788888888887642 2457899999999887
No 41
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-41 Score=354.47 Aligned_cols=298 Identities=16% Similarity=0.129 Sum_probs=227.1
Q ss_pred hhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCC
Q psy14428 152 QQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNR 231 (583)
Q Consensus 152 ~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~ 231 (583)
.+...++.....+.++|+.|+|+.+ +++.+.+++.+... ....|+++.|.++||+++|+++++++|+.+++++
T Consensus 13 ~~~~~~~~~~~~~~i~l~~~~p~~~-----~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~ 85 (374)
T PRK05839 13 ELLKEITPNKEYKGLDLTIGEPQFE-----TPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENE 85 (374)
T ss_pred HHHHHhhhcCCCCeEEcCCCCCCCC-----CCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcce
Confidence 4444333223458899999998632 34777777766543 2678999999999999999999988899999999
Q ss_pred eEEEecCCchhHHHHHHHHHHHh-CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCC
Q psy14428 232 LAIVQGISGSGSLRVGTAFLERF-YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPE 309 (583)
Q Consensus 232 I~i~~t~G~~~al~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~ 309 (583)
|++ |+|+++++.++..+ .+ .++||.|++++|+|+.|...++..|++++++++ +++ ++.+|+.. ..+ +
T Consensus 86 I~i--t~G~~~al~~~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~-~~~~~~~~d~~~--~~~----~ 154 (374)
T PRK05839 86 LIP--TFGTREVLFNFPQF--VLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPL-TKENDFTPSLNE--KEL----Q 154 (374)
T ss_pred EEE--ecCcHHHHHHHHHH--HhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeec-ccccCCcCCcch--hhh----c
Confidence 999 99999999875222 22 246999999999999999999999999999999 543 34444332 222 3
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-----HhcCcEEEEecCc
Q psy14428 310 RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-----KEVGQLCLAQSFS 384 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-----~~~~~vi~i~S~S 384 (583)
+++++++||||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ +.+++.... +..+++|+++|||
T Consensus 155 ~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi~~~SfS 231 (374)
T PRK05839 155 EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVLVINSIS 231 (374)
T ss_pred cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEEEEeccc
Confidence 57888999999999999999999999999999999999999999987653 233333221 1347999999999
Q ss_pred ccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhcc
Q psy14428 385 KNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFY 464 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~ 464 (583)
|+|++||+|+||+++ + +++++++.+.+.....+++.+.|.++...+.+.. ++++.+..++++++.+...+
T Consensus 232 K~~~~~GlRiG~ii~--~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~l 301 (374)
T PRK05839 232 KRSSAPGLRSGFIAG--D-----ASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDE---HAEFFRNIYAKNLKLAREIL 301 (374)
T ss_pred cccCCccceeEEEec--C-----HHHHHHHHHHHhhcCCCCChHHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999 7 5899999888776677889999999987776532 33333333333333333222
Q ss_pred C-CCccchhhHHHHhcC
Q psy14428 465 S-NPPIHGARIVTEILS 480 (583)
Q Consensus 465 ~-~~p~~g~~i~~~~l~ 480 (583)
. ..|.+|.|+|+++..
T Consensus 302 ~~~~p~gg~fi~~~~~~ 318 (374)
T PRK05839 302 GITIPPATFYVWLPVDN 318 (374)
T ss_pred CCCCCCeeEEEEEeCCC
Confidence 2 278899999988753
No 42
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=8e-41 Score=357.36 Aligned_cols=311 Identities=14% Similarity=0.138 Sum_probs=249.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCC------CCCCCCCCeEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGED------FPAFKDNRLAI 234 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~------g~~~~~~~I~i 234 (583)
..++.|+|+.|.|+.+ ....+++.+.+++.+.+......+|+++.|.++||++||+|+++++ +..+++++|++
T Consensus 31 ~~~~~i~l~~g~p~~~-~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~i 109 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLD-GNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVL 109 (412)
T ss_pred CCCCeeecCCcCCCCc-CCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEE
Confidence 5678899999998632 1123568888888887765445789999999999999999998653 57789999999
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEE
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
|+|+++++.++ +..++.+||+|++++|+|..+...++..|++++.+|+..++++++|++.+++.+ .++++++
T Consensus 110 --t~G~~~al~~~---~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~---~~~~~~i 181 (412)
T PTZ00433 110 --CSGVSHAILMA---LTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLV---DDRTKAL 181 (412)
T ss_pred --eCChHHHHHHH---HHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHh---ccCceEE
Confidence 99999999985 445667799999999999999999999999999999832335789999998877 4568889
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi 394 (583)
+++|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ...+++..+. ...++|+++||||+||+||+|+
T Consensus 182 ~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~~~i~~~SfSK~~~~pGlRl 258 (412)
T PTZ00433 182 IMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFTSVADFD-TTVPRVILGGTAKNLVVPGWRL 258 (412)
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC--CCccchhhcc-CCCceEEEccchhhcCCCCeeE
Confidence 999999999999999999999999999999999999999999875 2334555542 2346899999999999999999
Q ss_pred eEEEEEcCCch-hHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhh
Q psy14428 395 GTFSVLTPTSD-ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGAR 473 (583)
Q Consensus 395 G~lv~~~p~~~-~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~ 473 (583)
||+++ +++. ..+++++.+.+... ...+++.+.|.+++.++.+. .
T Consensus 259 G~~i~--~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~-~------------------------------- 303 (412)
T PTZ00433 259 GWLLL--VDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNT-P------------------------------- 303 (412)
T ss_pred EEEEE--eCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcC-c-------------------------------
Confidence 99997 3321 01357888877543 34578999999998888652 0
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 474 IVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 474 i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..+++++++++.++|+.+.+.|++.. .+.+..+++|+|.|..++.
T Consensus 304 ---------------~~~~~~~~~~~~~~r~~l~~~L~~~~---~~~~~~p~gg~f~~~~l~~ 348 (412)
T PTZ00433 304 ---------------QEHLEQIVAKLEEGAMVLYNHIGECI---GLSPTMPRGSMFLMSRLDL 348 (412)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHhcCC---CCcccCCCeeEEEEEEech
Confidence 11245566677888999999998642 2556789999999988764
No 43
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=6.8e-41 Score=357.68 Aligned_cols=295 Identities=15% Similarity=0.136 Sum_probs=231.6
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhcc----CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK----NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
.++.++|+.|+++.. +++.+.+++.+...+ ....+|++..|.++||++||+|+.+.+|+.+++++|++ |
T Consensus 33 ~~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t 105 (409)
T PRK07590 33 EAKIIRLGIGDVTQP-----LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFI--S 105 (409)
T ss_pred CCceEEecCcCCCCC-----CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEE--C
Confidence 567899999998632 456777777766643 13568999999999999999999888899999999999 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCe-----------EEEEecccCCCCCCChhhHHHHHHc
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLN-----------VGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~-----------~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
+|+++++.++ +. ++.+||+|++++|+|+.|...++..|++ ++.+|+ +++ .++.++..
T Consensus 106 ~Ga~~al~~l---~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~-~~~-~~~~~d~~------ 173 (409)
T PRK07590 106 DGAKCDTGNI---LD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPC-TAE-NNFVPELP------ 173 (409)
T ss_pred CCHHHHHHHH---HH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeec-ccc-cCCcccCc------
Confidence 9999999874 33 3457999999999999999999999997 899998 543 23332211
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
.++++++++||||||||.++|.+++++|+++|++++++||+||+|.+|.+++ ..+.++.++....++||+++||||+
T Consensus 174 -~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~ 250 (409)
T PRK07590 174 -EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDP--SLPHSIYEIEGARECAIEFRSFSKT 250 (409)
T ss_pred -ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCC--CCCcchhhCCCcccceEEEecCccc
Confidence 2567888899999999999999999999999999999999999999998865 2233455543223579999999999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHH------------HHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHH
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQL------------KILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMS 454 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l------------~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 454 (583)
||+||+|+||+++ | +++++.+ .........++|.+.|.++..++++..
T Consensus 251 ~~~pGlRiG~~i~--~-----~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~------------- 310 (409)
T PRK07590 251 AGFTGTRCAYTVV--P-----KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG------------- 310 (409)
T ss_pred cCCcCceeEEEEc--C-----HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc-------------
Confidence 9999999999999 7 4677632 222223345688899999888876421
Q ss_pred HHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCC
Q psy14428 455 QLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGL 534 (583)
Q Consensus 455 ~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l 534 (583)
.++++++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..+
T Consensus 311 ----------------------------------~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~g~~f~wi~~ 352 (409)
T PRK07590 311 ----------------------------------KAQIKELIDYYMENAKIIREGLESAG----FEVYGGVNAPYIWVKT 352 (409)
T ss_pred ----------------------------------HHHHHHHHHHHHHHHHHHHHHHHhcC----CceecCCcceEEEEEC
Confidence 12355667777888999999998863 4556678999999988
Q ss_pred Ch
Q psy14428 535 SA 536 (583)
Q Consensus 535 ~~ 536 (583)
+.
T Consensus 353 ~~ 354 (409)
T PRK07590 353 PD 354 (409)
T ss_pred CC
Confidence 64
No 44
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=5.1e-40 Score=348.50 Aligned_cols=313 Identities=20% Similarity=0.242 Sum_probs=241.8
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC---CCCeEEEecCC
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK---DNRLAIVQGIS 239 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~---~~~I~i~~t~G 239 (583)
.++++.++|...++.+ +.+.+.++++..+.. ....++|+++.|.++||+++++++.+.++ .+. .++|++ |+|
T Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~i--t~G 77 (388)
T PRK08637 3 ATKYNATIGMATEKGG-PMYLSSLQDLLNDLT-PDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIV--TNA 77 (388)
T ss_pred ccceecceeeEecCCC-cchHHHHHHHHHhhc-cccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeE--ccc
Confidence 4568888888865543 556677777766643 23468899999999999999999987653 333 368899 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-hcCCeEEEEecccCCCCCCChhhHHHHHHcC-CCCcEEEEeC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-PERSILFLQT 317 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-~~~~~~i~i~ 317 (583)
+++++.++ +..++++||.|++++|+|+.|...+. ..|++++.+|+ +.+++++|++.+++.++.. .+.++++++|
T Consensus 78 ~~~al~~~---~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~-~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~ 153 (388)
T PRK08637 78 LTHGLSLV---ADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPI-FDEDGGFDTDALKEALQAAYNKGKVIVILN 153 (388)
T ss_pred hHHHHHHH---HHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecc-cCCCCcCCHHHHHHHHHhhccCCCEEEEEe
Confidence 99999985 55577789999999999999998865 68999999998 4344689999999888522 3567789999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHh-----cCeEEEEeccCCCCCCCCCCCchHHH-HHHHHhcCcE--EEEecCcccccc
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQ-----RHLYPFFDMAYLGLTSGDFDKDAFSL-RYFAKEVGQL--CLAQSFSKNMGL 389 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~-----~~i~iI~De~Y~~l~~~~~~~~~~~~-~~~~~~~~~v--i~i~S~SK~~~l 389 (583)
|||||||.++|.+++++|+++|++ ++++||+||+|.+|.|++. ..+++ ..+.+..+++ ++++||||.|++
T Consensus 154 ~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~--~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~ 231 (388)
T PRK08637 154 FPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS--YKESLFAALANLHSNILAVKLDGATKEEFV 231 (388)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc--cchhhHHHhhcccccceEEEeccccccCCC
Confidence 999999999999999999998875 8999999999999998762 33343 3333445675 456699999999
Q ss_pred cCccceEEEEEcCC---chhHHHHHHHHHHH----HhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh
Q psy14428 390 YGERVGTFSVLTPT---SDETERIMSQLKIL----IRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG 462 (583)
Q Consensus 390 ~GlRiG~lv~~~p~---~~~~~~li~~l~~~----~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~ 462 (583)
||+|+||+++ ++ .. +++++++.+. .+....++|.+.|.++..+++++.
T Consensus 232 pGlRlG~~~~--~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--------------------- 286 (388)
T PRK08637 232 WGFRVGFITF--GTKAGSS--QTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPE--------------------- 286 (388)
T ss_pred cccceEEEEE--ccccCCc--HHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHH---------------------
Confidence 9999999998 52 11 3677777642 223456889999999999998743
Q ss_pred ccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 463 FYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 463 ~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
|.+++++++..+.++++.+.+.|++.+.++.+.+..+++|+|.|..++.
T Consensus 287 -------------------------~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~ 335 (388)
T PRK08637 287 -------------------------FDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG 335 (388)
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh
Confidence 3344555666677888888888877644555777888999999998863
No 45
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=353.24 Aligned_cols=299 Identities=15% Similarity=0.136 Sum_probs=243.5
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~ 240 (583)
.++.++|+.|.|+.. .++.+.+++.+...+. ..+|++..|.++||+++++++++.+|+.++++ +|++ |+|+
T Consensus 25 ~~~~i~l~~g~p~~~-----~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~ 96 (387)
T PRK08912 25 EHGAINLGQGFPDDP-----GPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMV--TSGA 96 (387)
T ss_pred hCCeEEccCCCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEE--eCCc
Confidence 357899999998632 2345555555544332 56799999999999999999998889999998 9999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..++.+||+|++++|+|+.+...++..|++++.+++ +++++++|++.+++.+ .+++++++++|||
T Consensus 97 ~~al~~~---~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~---~~~~~~v~l~~p~ 169 (387)
T PRK08912 97 TEALAAA---LLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRL-EPPHWRLPRAALAAAF---SPRTKAVLLNNPL 169 (387)
T ss_pred HHHHHHH---HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccCcCCHHHHHHHh---CccceEEEEeCCC
Confidence 9999875 4455667999999999999999999999999999998 5556889999998877 4577889999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|++++++||+||+|.++.+++ ....++.++.+..+++|+++||||.||+||+|+||+++
T Consensus 170 NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~- 246 (387)
T PRK08912 170 NPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDG--RRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCA- 246 (387)
T ss_pred CCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCC--CCCcChhhCCCccCceEEEeechhhccCcCceeEEEec-
Confidence 999999999999999999999999999999999999875 23334444323347899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++.+.+.......+++...|.++...+.+.
T Consensus 247 -~-----~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---------------------------------------- 280 (387)
T PRK08912 247 -A-----PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKP---------------------------------------- 280 (387)
T ss_pred -C-----HHHHHHHHHHHhhccccCChHHHHHHHHHHhCC----------------------------------------
Confidence 7 589999988777666677777788777666421
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
. ++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 281 -----~---~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~g~~~l~~~l~~ 324 (387)
T PRK08912 281 -----D---DYFEGMRADLARSRDRLAAGLRRIG----FPVLPSQGTYFLTVDLAP 324 (387)
T ss_pred -----H---HHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEecccc
Confidence 0 1234566777889999999998864 456678899999988764
No 46
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.6e-40 Score=356.38 Aligned_cols=306 Identities=15% Similarity=0.211 Sum_probs=239.5
Q ss_pred CCC-CccccCCccccCCCCCCCCChHHHHHHHHHhc----------c-CCCCCCCCCCCCHHHHHHHHHHHhCCCC--CC
Q psy14428 161 PHP-KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYE----------K-NLDHEYANIGGDAKFCKLAAQLAYGEDF--PA 226 (583)
Q Consensus 161 ~~~-~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~----------~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~ 226 (583)
.+| +.|+|+..+.. ...+.+.+.+++... . .....|.+..|.++||+++|+++.+.++ ..
T Consensus 44 ~np~g~i~l~~aeN~------l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~ 117 (447)
T PLN02607 44 HNPSGVIQMGLAENQ------VSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKAR 117 (447)
T ss_pred cCCCceEEEechhhh------hhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCC
Confidence 444 46888887752 123444444443321 0 1134588899999999999999998766 46
Q ss_pred CCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-hcCCeEEEEecccCCCCCCChhhHHHHHH
Q psy14428 227 FKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 227 ~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
+++++|++ |+|++++++++ +..+++|||.|++++|+|+.+...+. ..|+++++|++...+++.+|++.+++++.
T Consensus 118 v~p~~Ivi--t~G~t~al~~l---~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~ 192 (447)
T PLN02607 118 FDPDRIVL--TAGATAANELL---TFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQ 192 (447)
T ss_pred cCHHHeEE--cCChHHHHHHH---HHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHH
Confidence 89999999 99999999985 44567889999999999999998887 57999999998323346789999998886
Q ss_pred cC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh------cCc
Q psy14428 306 AM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE------VGQ 376 (583)
Q Consensus 306 ~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~------~~~ 376 (583)
+. ..++++++++|||||||.+++++++++|+++|++++++||+||+|.++.|++ .+..++.++.+. .++
T Consensus 193 ~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~--~~f~S~~s~~~~~~~~~~~~~ 270 (447)
T PLN02607 193 EAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA--SEFVSVAEIVEARGYKGVAER 270 (447)
T ss_pred HHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCcccHHHHHhhcCCCCCcCc
Confidence 43 3578899999999999999999999999999999999999999999998875 234555554321 468
Q ss_pred EEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHH
Q psy14428 377 LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456 (583)
Q Consensus 377 vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l 456 (583)
|++++||||.||+||+|+||+++ ++ +.+++.++... .+.++|.++|.+++.+++++.+.
T Consensus 271 v~vi~s~SK~fg~~GlRvG~ivs--~n----~~l~~~~~~~~--~~~~~s~~~q~~~~~~L~d~~~~------------- 329 (447)
T PLN02607 271 VHIVYSLSKDLGLPGFRVGTIYS--YN----DKVVTTARRMS--SFTLVSSQTQHLLASMLSDEEFT------------- 329 (447)
T ss_pred EEEEEcchhcCCCCcceEEEEEE--cC----HHHHHHHHHHh--hcCCCCHHHHHHHHHHhCCchhH-------------
Confidence 99999999999999999999998 64 46777776543 23467889999999999874321
Q ss_pred HHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 457 ~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+.+++.++++.++++.+.+.|++.+. .+..+++|+|+|.+++.
T Consensus 330 --------------------------------~~~l~~~r~~l~~~~~~~~~~L~~~gi----~~~~~~ag~fvw~~L~~ 373 (447)
T PLN02607 330 --------------------------------ENYIRTNRERLRKRYEMIVQGLRRAGI----ECLKGNAGLFCWMNLSP 373 (447)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHHHhCCC----CcccCCeeEEEEEEchH
Confidence 123566778888999999999998653 46778999999998864
No 47
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.5e-40 Score=353.45 Aligned_cols=302 Identities=13% Similarity=0.130 Sum_probs=245.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
..+..++|+.|.|+.. +++.+.+++.+...+.....|+++.|.++||+++++|+.+.+|+.++++ +|++ |+|
T Consensus 27 ~~~~~i~l~~g~p~~~-----~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~--t~G 99 (395)
T PRK08175 27 RGEDIIDFSMGNPDGP-----TPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIV--TIG 99 (395)
T ss_pred cCCCeEEcCCCCCCCC-----CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccC
Confidence 4577899999988632 3354555555554444467899999999999999999998889999987 8999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..++++||+|++++|+|+.+...++..|++++.+++ +++ +.+++.+++.++...+++++++++||
T Consensus 100 ~~~~l~~~---~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~--~~~~~~l~~~l~~~~~~~~~v~i~~p 173 (395)
T PRK08175 100 SKEGLAHL---MLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPL-VEG--VDFFNELERAIRESYPKPKMMILGFP 173 (395)
T ss_pred cHHHHHHH---HHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEec-ccC--CCcHHHHHHHHhhccCCceEEEEeCC
Confidence 99999985 3456677999999999999999999999999999998 543 33577888777554457889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++++++||+||+|.++.+++ ...+++.++....+++|+++||||+||+||+|+||+++
T Consensus 174 ~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~ 251 (395)
T PRK08175 174 SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDG--WKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG 251 (395)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCC--CCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC
Confidence 9999999999999999999999999999999999999865 23344444322246899999999999999999999998
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.+.+.....+++.+.|.++..++++.
T Consensus 252 --~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--------------------------------------- 285 (395)
T PRK08175 252 --N-----PELVSALARIKSYHDYGTFTPLQVAAIAALEGD--------------------------------------- 285 (395)
T ss_pred --C-----HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCc---------------------------------------
Confidence 6 589999998887777788888888887777531
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 286 ---------~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~p~~g~~i~i~l~~ 329 (395)
T PRK08175 286 ---------QQCVRDIAEQYKRRRDVLVKGLHEAG----WMVEMPKASMYVWAKIPE 329 (395)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHcC----CcccCCCEEEEEEEECCc
Confidence 12356677788889999999998863 555678899999998875
No 48
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.6e-40 Score=362.62 Aligned_cols=308 Identities=15% Similarity=0.145 Sum_probs=239.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+.+.|+|+.|++++ .+.+ +++.+.+++.+.... ..+|++..|.++||++||+|+..+++..+++++|++ |+|+
T Consensus 144 ~g~~~i~l~~G~p~~-~~~~-~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~i--t~G~ 217 (517)
T PRK13355 144 AGTHILKLNIGNPAP-FGFR-TPDEVVYDMAQQLTD--TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYT--GNGV 217 (517)
T ss_pred cCCCeEEecCcCCCc-CCCC-CCHHHHHHHHHHhhc--CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEE--eCcH
Confidence 457899999999953 2222 456666666655543 467999999999999999999887777799999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++++.++ +..++++||+|++++|+|+.|...++..|++++.+++ +++ ++.+|++.+++.+ .+++++++++||
T Consensus 218 ~eal~~~---~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~-~~~~~~~~d~~~l~~~~---~~~~k~i~i~nP 290 (517)
T PRK13355 218 SELINLS---MSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRC-DEQSEWYPDIDDIRSKI---TSRTKAIVIINP 290 (517)
T ss_pred HHHHHHH---HHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeec-CcccCCCCCHHHHHHhc---CcCceEEEEECC
Confidence 9999985 4456778999999999999999999999999999998 543 5789999998877 567899999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++|+++||+||+|.+|.|++ ..+.++.++. ....||+++||||+|++||||+||+++
T Consensus 291 ~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~--~~~~s~~~~~-~~~~vi~~~S~SK~~~~~G~RiG~~i~ 367 (517)
T PRK13355 291 NNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDG--LEHTSIASLA-PDLFCVTFSGLSKSHMIAGYRIGWMIL 367 (517)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCC--CCcccHHHhC-CCCeEEEEecchhhccCcccceEEEEe
Confidence 9999999999999999999999999999999999999976 2344555542 234588899999999999999999997
Q ss_pred EcCCch-hHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 400 LTPTSD-ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 400 ~~p~~~-~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+.+. ..+.+++.+... .....+++.++|.++..++++...
T Consensus 368 --~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~------------------------------------ 408 (517)
T PRK13355 368 --SGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQS------------------------------------ 408 (517)
T ss_pred --eCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCcc------------------------------------
Confidence 4221 112345555433 345567899999999998864210
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+.+++++.+ ++.++|+.+.+.|++. || +.+..|+++||.|+.++.
T Consensus 409 ---------~~~~~~~~~-~~~~~r~~l~~~L~~~--~g-~~~~~p~g~fy~~~~l~~ 453 (517)
T PRK13355 409 ---------VKDYLVPGG-RVYEQRELVYNALNAI--PG-ISAVKPKAAFYIFPKIDV 453 (517)
T ss_pred ---------HHHHHHHHH-HHHHHHHHHHHHHhcC--CC-cccCCCCeeeEEEeecCc
Confidence 011122222 2235678888888875 33 667889999999987753
No 49
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.2e-40 Score=353.63 Aligned_cols=297 Identities=17% Similarity=0.205 Sum_probs=246.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.++|+.|.++.. +++.+.+++.+..... ...|++..|.++||+++|+|+++.+|+.+++++|++ |+|+
T Consensus 28 ~~~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G~ 99 (388)
T PRK07337 28 AGRDIIHMGIGEPDFT-----APEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVV--TAGA 99 (388)
T ss_pred cCCCEEEeCCcCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEE--ecCc
Confidence 4567899999998532 4567788877766543 567999999999999999999988899999999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++++.++ +..++.+||+|++++|+|+.+...++..|++++.+|+ ++ +++++|++.+++.+ .+++++++++||
T Consensus 100 ~~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~---~~~~~~v~l~~p 172 (388)
T PRK07337 100 SAALLLA---CLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPS-GPAERFQLTAADVEAAW---GERTRGVLLASP 172 (388)
T ss_pred HHHHHHH---HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeec-CCccCCcCCHHHHHhhc---CccceEEEEECC
Confidence 9999985 4445677999999999999999999999999999999 54 35789999998877 567889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++++++||+||+|.++.+++ ...+... ..+++|+++||||.||+||+|+||+++
T Consensus 173 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~---~~~~vi~~~S~SK~~~~~G~RiG~~~~ 246 (388)
T PRK07337 173 SNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDA---APVSALS---LGDDVITINSFSKYFNMTGWRLGWLVV 246 (388)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCC---CCcChhh---ccCCEEEEEechhhcCCchhheeeeec
Confidence 9999999999999999999999999999999999998865 1223222 346899999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.+.......+++.++|.++..++.++.+.
T Consensus 247 --~-----~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~------------------------------------ 283 (388)
T PRK07337 247 --P-----EALVGTFEKLAQNLFICASALAQHAALACFEPDTLA------------------------------------ 283 (388)
T ss_pred --C-----HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchH------------------------------------
Confidence 7 579999998887777789999999998888653211
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-ccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDH-ITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~-~~~~~g~f~~~~l~~ 536 (583)
.++++++.+.++|+.+.+.|++.+ +.. ..|++|+|.|..++.
T Consensus 284 -----------~~~~~~~~~~~~r~~~~~~L~~~~----~~~~~~p~~g~f~~~~~~~ 326 (388)
T PRK07337 284 -----------IYERRRAEFKRRRDFIVPALESLG----FKVPVMPDGAFYVYADCRG 326 (388)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHhcC----CccccCCCeeEEEEEeccc
Confidence 124456667788888988888854 222 468899999998763
No 50
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-40 Score=348.96 Aligned_cols=348 Identities=16% Similarity=0.157 Sum_probs=262.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCeEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK-DNRLAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~-~~~I~i~~t~G~~ 241 (583)
++.++|+.|.++.. +++.+.+++.+.........|.+..|.++||+++++++.+..|+.++ +++|++ |+|++
T Consensus 27 ~~~~~l~~g~~~~~-----~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~--t~G~~ 99 (389)
T PRK05957 27 PGTISLGQGVVSYP-----PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVV--TAGSN 99 (389)
T ss_pred CCeEEccCCCCCCC-----CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCChH
Confidence 56799999998622 56788888887765443568999999999999999999888888877 789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ + +++++|++.+++.+ .+++++++++||||
T Consensus 100 ~~l~~~---~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i---~~~~klv~~~~p~N 171 (389)
T PRK05957 100 MAFMNA---ILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT-D-DNYQLQPEAIEQAI---TPKTRAIVTISPNN 171 (389)
T ss_pred HHHHHH---HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec-C-CCCCcCHHHHHHhc---CcCceEEEEeCCCC
Confidence 999875 3445677999999999999999999999999999998 4 34789999999887 45788999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|+++|++||+||+|.+|.+++. +..+...+.+..+++|+++||||.||+||+|+||+++
T Consensus 172 PtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-- 247 (389)
T PRK05957 172 PTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVI-- 247 (389)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCCccCcEEEEecchhhccCccceeEEEec--
Confidence 999999999999999999999999999999999998752 2223334334557899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCCh--hhhhhhhhHHHHHHHHHHHHhh--c-cC-CCccchhhHH
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDP--KLKAQCDETERIMSQLKILIRG--F-YS-NPPIHGARIV 475 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~l~~~~r~--~-~~-~~p~~g~~i~ 475 (583)
+ +++++++.+.+.....+++.+.|.++..+++++ .++++.+..++.++.+.+.++. . .. .+|.+|.|+|
T Consensus 248 ~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~ 322 (389)
T PRK05957 248 P-----IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCF 322 (389)
T ss_pred C-----HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEE
Confidence 7 589999999887777888999999999999763 4566555444333333333332 1 23 3566778888
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCC-cccccccccceeecCCChhhhhhhhhhhhHHHH
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILD---KGSKKN-WDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~---~~~pg~-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~ 551 (583)
.++..+.. ..++..+.+++ ...||+ +........++++...+.+++++ .+.++.+.+
T Consensus 323 ~~~~~~~~------------------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~-~~~~l~~~~ 383 (389)
T PRK05957 323 LKVNTDLN------------------DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKE-GIERLVQGL 383 (389)
T ss_pred EeCCCCCC------------------hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHH-HHHHHHHHH
Confidence 87753211 01111111222 234665 32222234677887777776655 555555555
Q ss_pred HH
Q psy14428 552 KS 553 (583)
Q Consensus 552 ~~ 553 (583)
+.
T Consensus 384 ~~ 385 (389)
T PRK05957 384 KT 385 (389)
T ss_pred Hh
Confidence 43
No 51
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=3.8e-40 Score=344.88 Aligned_cols=292 Identities=14% Similarity=0.122 Sum_probs=237.2
Q ss_pred ccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCchhH
Q psy14428 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISGSGS 243 (583)
Q Consensus 165 ~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~~~a 243 (583)
.++|+.|.|+.. +++.+.+++++.... ..+|+++.|.++||+++++|+.+.+|+.++++ +|++ |+|++++
T Consensus 2 ~~~~~~g~p~~~-----~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~~a 72 (350)
T TIGR03537 2 LFDFGTGDPKEP-----TPPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSKEA 72 (350)
T ss_pred eEeccCCCCCCC-----CCHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChHHH
Confidence 478888887522 467888888876542 67799999999999999999998889999998 9999 9999999
Q ss_pred HHHHHHHHHHhCCCC---CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 244 LRVGTAFLERFYPGV---KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 244 l~l~~~~l~~~~~~g---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+.++ +..++.+| |+|++++|+|+.|...++..|++++.+++..++++.+|++.+++++ .++++++++++||
T Consensus 73 i~~~---~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~---~~~~~~i~i~~p~ 146 (350)
T TIGR03537 73 IFHF---PLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSI---LEETKIVWINYPH 146 (350)
T ss_pred HHHH---HHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhh---hhccEEEEEeCCC
Confidence 9985 34455556 7999999999999999999999999999932334667999998887 3468899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|++++++||+||+|.++.+++ ...++..+ ..+++|+++||||++|+||+|+||+++
T Consensus 147 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~- 220 (350)
T TIGR03537 147 NPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE---PPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAG- 220 (350)
T ss_pred CCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC---CCCchhhc--CcCCEEEEeecccccCCccccceeeec-
Confidence 999999999999999999999999999999999988764 23334332 246899999999999999999999998
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++.........+++.+.|.++...+.+..
T Consensus 221 -~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--------------------------------------- 255 (350)
T TIGR03537 221 -D-----EKLISFLRKLRANFGVASPDFVQAAAKAAWSDDN--------------------------------------- 255 (350)
T ss_pred -C-----HHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcH---------------------------------------
Confidence 6 5899999988776666777778888766654311
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
| +++.+.++.++++.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 256 -------~---~~~~r~~l~~~~~~~~~~l~~~g----~~~~~~~g~~~~~~~~~~ 297 (350)
T TIGR03537 256 -------H---VLERRKIFKRKRDLFIEFFNKVG----LEYLYPDATFYLWVKVPS 297 (350)
T ss_pred -------H---HHHHHHHHHHHHHHHHHHHHHCC----CcccCCCeEEEEEEECCC
Confidence 1 23345566777888888887754 456678899999988764
No 52
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=7.4e-40 Score=347.64 Aligned_cols=299 Identities=20% Similarity=0.243 Sum_probs=246.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G~~ 241 (583)
++.++|+.|.++.. +++.+.+++.+..... ...|.+..|.++||+++++++...+++.+++ ++|++ |+|++
T Consensus 30 ~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~i--t~G~~ 101 (391)
T PRK07309 30 PGILKLTLGEPDFT-----TPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILV--TIGAT 101 (391)
T ss_pred CCeEEcCCCCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 57899999998622 4577888887766543 3569999999999999999999888888875 79999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+++ +++++++|++.+++.+++..+++++++++||||
T Consensus 102 ~al~~~---~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~N 177 (391)
T PRK07309 102 EALSAS---LTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDT-TENDFVLTPEMLEKAILEQGDKLKAVILNYPAN 177 (391)
T ss_pred HHHHHH---HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEec-CCcCCcCCHHHHHHHhhccCCCeEEEEEECCCC
Confidence 999985 4445677999999999999999999999999999998 555578899999988865445688999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++|+++||+||+|.++.+++ ....++..+ ..+++|+++||||+||+||+|+||+++
T Consensus 178 PtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~--~~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG~~v~-- 251 (391)
T PRK07309 178 PTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTG--EPHVSIAEY--LPDQTILINGLSKSHAMTGWRIGLIFA-- 251 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCC--CCCCCHHHh--ccCCEEEEecChhhccCccceeEEEEe--
Confidence 99999999999999999999999999999999999865 233445443 237899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
+ +++++++.+.......+++.+.|.++.++++++...
T Consensus 252 ~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~-------------------------------------- 288 (391)
T PRK07309 252 P-----AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDD-------------------------------------- 288 (391)
T ss_pred C-----HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhH--------------------------------------
Confidence 7 589999998766666788999999999988763211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..+++.++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 289 ----------~~~~~~~~~~~~~~~~~~l~~~~----~~~~~p~gg~~~~~~l~~ 329 (391)
T PRK07309 289 ----------ALPMKKEYIKRRDYIIEKMTDLG----FKIIKPDGAFYIFAKIPA 329 (391)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEECCC
Confidence 12344555677888888887753 556778999999987654
No 53
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-40 Score=347.20 Aligned_cols=301 Identities=19% Similarity=0.169 Sum_probs=248.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
.++.++|+.|+++.+ +++.+.+++.+...+. ...|++..|.++||+++++++.+.+|+.+++++|++ |+|++
T Consensus 23 ~~~~i~l~~g~~~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~ 94 (382)
T PRK06108 23 REGVLPLWFGESDLP-----TPDFIRDAAAAALADG-ETFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSGV 94 (382)
T ss_pred cCCeEEecCCCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCChH
Confidence 357899999998522 4578888888777653 456999999999999999999988888899999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC--CCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN--KTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~--~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++.++ +..++.+||+|++++|+|+.+...++..|++++.+|+ +. .++.+|++.+++.+ .++++++++++|
T Consensus 95 ~al~~~---~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~d~~~l~~~~---~~~~~~i~l~~p 167 (382)
T PRK06108 95 QALMLA---AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPL-DFGGGGWTLDLDRLLAAI---TPRTRALFINSP 167 (382)
T ss_pred HHHHHH---HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeC-CCCCCCccCCHHHHHHhc---CccceEEEEECC
Confidence 999985 4456677999999999999999999999999999999 43 23568999998877 457888999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++++++||+||+|.++.++.. ...+++..+.+..+++++++||||+||++|+|+||+++
T Consensus 168 ~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~ 246 (382)
T PRK06108 168 NNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG-GRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA 246 (382)
T ss_pred CCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC-CCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC
Confidence 99999999999999999999999999999999999998621 23334444434457899999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.+.......++|.+.|.++..+++++.
T Consensus 247 --~-----~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~-------------------------------------- 281 (382)
T PRK06108 247 --P-----PALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGE-------------------------------------- 281 (382)
T ss_pred --C-----HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCh--------------------------------------
Confidence 7 5899999887766677889999999988886521
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++++.++|+.+.+.|++. +| +.+..+++|+|.|..++.
T Consensus 282 ----------~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~~g~~~~~~l~~ 325 (382)
T PRK06108 282 ----------DFVAELVARLRRSRDHLVDALRAL--PG-VEVAKPDGAMYAFFRIPG 325 (382)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHhC--CC-CcccCCCeeEEEEEeCCC
Confidence 124455666778888888888775 33 566778999999988754
No 54
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.6e-40 Score=347.30 Aligned_cols=299 Identities=15% Similarity=0.189 Sum_probs=249.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.++|+.|+++.. +++.+.+++.++.... ...|.|..|.++||+++|+++.+.+|+.+++++|++ |+|+++
T Consensus 33 ~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~ 104 (391)
T PRK08361 33 ENVISLGIGEPDFD-----TPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIV--TAGAYE 104 (391)
T ss_pred cCeEEcCCCCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEE--eCChHH
Confidence 56899999998632 3578888888776543 467999999999999999999887888899999999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ +++ ++++|++.+++.+ .+++++++++||||
T Consensus 105 al~~~---~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i---~~~~~~v~i~~p~N 177 (391)
T PRK08361 105 ATYLA---FESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPL-REENEFQPDPDELLELI---TKRTRMIVINYPNN 177 (391)
T ss_pred HHHHH---HHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEec-CCccCCCCCHHHHHHhc---ccccEEEEEeCCCC
Confidence 99985 4456677999999999999999999999999999999 543 4679999998877 45678999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++++++||+||+|.+|.+++. ...++.++ ..+++|+++||||+||+||+|+||+++
T Consensus 178 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~-- 251 (391)
T PRK08361 178 PTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIA-- 251 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhcc--
Confidence 999999999999999999999999999999999988642 23344433 246899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
+ +++++++.+.......+++.+.|.++..+++++...
T Consensus 252 ~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~-------------------------------------- 288 (391)
T PRK08361 252 P-----EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESW-------------------------------------- 288 (391)
T ss_pred C-----HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCccc--------------------------------------
Confidence 7 578999888777667788999999999888763211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++++.++|+.+.+.|++. || +.+..+++|+|.|..++.
T Consensus 289 --------~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~~~p~g~~~~~~~l~~ 332 (391)
T PRK08361 289 --------KAVEEMRKEYNERRKLVLKRLKEM--PH-IKVFEPKGAFYVFANIDE 332 (391)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHhC--CC-CeecCCCEEEEEEEECCC
Confidence 235667777788899999999874 33 566778999999987763
No 55
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-39 Score=347.31 Aligned_cols=300 Identities=16% Similarity=0.169 Sum_probs=249.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.++|+.|.++.. +++.+.+++.+.+... ..+|+++.|.++||+++++++.+.+|+.+++++|++ |+|+
T Consensus 31 ~~~~~i~l~~g~p~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G~ 102 (402)
T PRK06107 31 AGRSIVDLTVGEPDFD-----TPDHIKQAAVAAIERG-ETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITV--GGGA 102 (402)
T ss_pred ccCCEEEcCCCCCCCC-----CCHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCCH
Confidence 4567899999998632 4577888888877543 567999999999999999999988899999999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++|+.++ +..++.+||+|++++|+|..|...+...|.+++.+++ ++ +++.+|++.+++.+ .+++++++++||
T Consensus 103 ~~al~~~---~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~-~~~~~~~~~~~~l~~~~---~~~~~~v~l~~p 175 (402)
T PRK06107 103 KQAIFLA---LMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVAC-PEEQGFKLTPEALEAAI---TPRTRWLILNAP 175 (402)
T ss_pred HHHHHHH---HHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecC-CcccCCCCCHHHHHhhc---CcCceEEEEECC
Confidence 9999985 3446677999999999999999999999999988988 43 34668888888876 457888889999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhc-CeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcccccccCccceEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQR-HLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~-~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
|||||.+++.+++++|+++|+++ +++||+||+|.++.|++ .+.+++.++. +..+++|+++||||+|++||+|+||+
T Consensus 176 ~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~ 253 (402)
T PRK06107 176 SNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDD--EPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYA 253 (402)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCC--CCCCCHHHhCcCccCCEEEEeccchhhcCcccceeee
Confidence 99999999999999999999998 99999999999998875 2344555542 23468999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
++ | +++++++.........+++.+.|.++..+++++.
T Consensus 254 ~~--~-----~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~------------------------------------ 290 (402)
T PRK06107 254 AG--P-----ADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQ------------------------------------ 290 (402)
T ss_pred ec--C-----HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCCh------------------------------------
Confidence 99 7 5899999999888888999999999999986421
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
+++++.++.+.++|+.+.+.|++. +| +.+..+++|+|.|.+++
T Consensus 291 ------------~~~~~~~~~~~~~~~~~~~~L~~~--~g-~~~~~p~gg~~~~~~~~ 333 (402)
T PRK06107 291 ------------SFVTESVAVYKQRRDYALALLNAI--PG-LSCLVPDGAFYLYVNCA 333 (402)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHhcC--CC-CcccCCCcceEEeeecc
Confidence 114455566788888898988774 33 56678999999998763
No 56
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=345.18 Aligned_cols=301 Identities=17% Similarity=0.143 Sum_probs=244.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...++|+.|.++.. +++.+.+++.+.........|.+..|.++||+++++++.+.+|+.+++++|++ |+|+
T Consensus 27 ~~~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~ 99 (386)
T PRK07550 27 ADGPLIDLSQAVPGYP-----PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHI--TSGC 99 (386)
T ss_pred cCCCeEEeCCCCCCCC-----CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEE--ecCc
Confidence 4556899999998521 45788888877765444577999999999999999999988899999999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++++.++ +..++.+||+|++++|+|..+...++..|++++.+++ ++ +++.+|++.+++.+ .++++++++++|
T Consensus 100 ~~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~~~l~~~~---~~~~~~v~~~~P 172 (386)
T PRK07550 100 NQAFWAA---MVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPC-DEGPGLLPDPAAAEALI---TPRTRAIALVTP 172 (386)
T ss_pred HHHHHHH---HHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEec-CCCcCCCCCHHHHHHHh---cccCcEEEEeCC
Confidence 9999885 4456677999999999999999999999999999999 54 34557888898887 346778888899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++++++||+||+|.+|.++.. ...++.+..+..+++++++||||++|+||+|+||+++
T Consensus 173 ~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~ 250 (386)
T PRK07550 173 NNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG--APHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVA 250 (386)
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCcchhhCCCccccEEEEecchhhccCcccceEeeec
Confidence 99999999999999999999999999999999999977531 2222322222356899999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.+.......++|.++|.++..++++ +
T Consensus 251 --~-----~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~------------------------------------- 284 (386)
T PRK07550 251 --S-----PARIAEIEKFMDTVAICAPRIGQIAVAWGLPN--L------------------------------------- 284 (386)
T ss_pred --C-----HHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc--H-------------------------------------
Confidence 7 57899999888777888899999999888754 1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.+.++|+.+.+.|++. + .+. ..+++|+|.|..++.
T Consensus 285 ---------~~~~~~~~~~~~~~~~~l~~~L~~~--~-~~~-~~~~g~~~~~~~~~~ 328 (386)
T PRK07550 285 ---------ADWRAGNRAEIARRRDAFRAVFARL--P-GWE-LLASGAYFAYVRHPF 328 (386)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHhC--C-Cce-eCCCceEEEEecCCC
Confidence 1224455666778888888888875 2 243 246789999987754
No 57
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=5.8e-39 Score=340.57 Aligned_cols=298 Identities=13% Similarity=0.145 Sum_probs=242.7
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~ 240 (583)
.++.++|+.|.|+.+ .++.+.+++.+..... ..+|++..|.++||+++++++.+.+|+.++++ +|++ |+|+
T Consensus 23 ~~~~i~l~~g~p~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~ 94 (387)
T PRK07777 23 RTGAVNLGQGFPDED-----GPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLV--TVGA 94 (387)
T ss_pred hCCeEEccCCCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCc
Confidence 457899999998743 2244566666555443 46799999999999999999988888888886 7999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC--CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK--TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~--~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
++++.++ +..++.+||+|++++|+|..+...++..|.+++.+++ +++ ++.+|++.+++.+ .+++++++++|
T Consensus 95 ~~al~~~---~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~~---~~~~~~v~l~~ 167 (387)
T PRK07777 95 TEAIAAA---VLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPL-VPDGRGFALDLDALRAAV---TPRTRALIVNS 167 (387)
T ss_pred HHHHHHH---HHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeec-CCccCCCcCCHHHHHHhc---CcccEEEEEcC
Confidence 9999885 3455677999999999999999999999999999998 443 4668999998877 45778999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.+++.+++++|+++|++++++||+||+|.++.+++. ...++.++.+..+++|+++||||+||+||+|+||++
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~ 245 (387)
T PRK07777 168 PHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWAC 245 (387)
T ss_pred CCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEEEEeechhhccCcCceeEEEe
Confidence 999999999999999999999999999999999999998652 333454443335689999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ + +++++++.+.......+++.+.|.++..++.+..
T Consensus 246 ~--~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~------------------------------------- 281 (387)
T PRK07777 246 G--P-----APLIAAVRAAKQYLTYVGGAPFQPAVAHALDHED------------------------------------- 281 (387)
T ss_pred c--C-----HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCc-------------------------------------
Confidence 9 7 5899999888776667778888888877775420
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
++++++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..++
T Consensus 282 -----------~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~~g~~~~~~~~~ 323 (387)
T PRK07777 282 -----------AWVAALRDSLQAKRDRLAAGLAEAG----FEVHDSAGTYFLCADPR 323 (387)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhCC----CCccCCCcceEEEeccc
Confidence 1244566677888999999998753 55667889999998764
No 58
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.8e-39 Score=340.79 Aligned_cols=291 Identities=14% Similarity=0.082 Sum_probs=237.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
...++++|+.|+++.. .++.+ +++.+..... .++|++..|.++||++||+++.. +++++|++ |+|+
T Consensus 24 ~~~~~~~~~~~e~~~~-----~~~~~-~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G~ 89 (373)
T PRK07324 24 AESCIDSLTLEELLAL-----AGKNP-EAFYQELGQK-KLTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNGA 89 (373)
T ss_pred ccCCCCCCcHHHHHhc-----cCcch-HHHHHHHhcC-CccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCCh
Confidence 4668899999999643 23445 5555555442 56899999999999999999863 67899999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++++.++ +..++++||+|+++.|+|..+...++..|++++.+|+ +++ ++.+|++.+++.+ .+++++++++||
T Consensus 90 ~~al~~~---~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~-~~~~~~~~d~~~l~~~~---~~~~kli~i~~p 162 (373)
T PRK07324 90 TGANFLV---LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQL-KEENGWLPDLDELRRLV---RPNTKLICINNA 162 (373)
T ss_pred HHHHHHH---HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEec-ccccCCCCCHHHHHHhC---CCCCcEEEEeCC
Confidence 9999985 4456778999999999999999999999999999999 443 4567888887766 567889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|+++|++||+||+|.++.+++ ..+++.. ..+++|+++||||+||+||+|+||+++
T Consensus 163 ~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s~~~---~~~~~I~~~s~SK~~~~~G~RiG~i~~ 236 (373)
T PRK07324 163 NNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPSIAD---LYEKGISTNSMSKTYSLPGIRVGWIAA 236 (373)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCChhh---ccCCEEEEecchhhcCCccceeEEEec
Confidence 9999999999999999999999999999999999998864 2334433 356899999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
| +++++++.+.+.....+++.++|.++..++++.
T Consensus 237 --~-----~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~--------------------------------------- 270 (373)
T PRK07324 237 --N-----EEVIDILRKYRDYTMICAGVFDDMLASLALEHR--------------------------------------- 270 (373)
T ss_pred --C-----HHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH---------------------------------------
Confidence 7 689999999988888889999999888777541
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.+.++|+.+.+.|++. + .+....|++|+|.|..++.
T Consensus 271 ---------~~~l~~~~~~~~~~~~~l~~~l~~~--~-~~~~~~p~gg~~~~i~~~~ 315 (373)
T PRK07324 271 ---------DAILERNRKIVRTNLAILDEWVAKE--P-RVSYVKPKAVSTSFVKLDV 315 (373)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHhcC--C-CceEECCCceEEEEEEeCC
Confidence 1234556667778888888888764 2 2556778999988876653
No 59
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-39 Score=337.53 Aligned_cols=286 Identities=14% Similarity=0.182 Sum_probs=221.8
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCCCCCHHHHHHHHHHHhCCC--CCCCCCCCeEEEecCC
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANIGGDAKFCKLAAQLAYGED--FPAFKDNRLAIVQGIS 239 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~--g~~~~~~~I~i~~t~G 239 (583)
+..++|+.|+++.. +++.+.+++.+...... ...|+ ..|.++||++||+|+++++ ++.+++++|++ |+|
T Consensus 28 ~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~G 99 (374)
T PRK02610 28 IQLDRLDTNEFPYD-----LPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANISV--GNG 99 (374)
T ss_pred cceeEecCCCCCCC-----CCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHEEE--cCC
Confidence 35788999988522 55788888877655421 35685 5799999999999998876 57899999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCC-EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-CCCcEEEEeC
Q psy14428 240 GSGSLRVGTAFLERFYPGVK-TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-PERSILFLQT 317 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-~~~~~~i~i~ 317 (583)
+++++.++ ++ .++.+|| .|++++|+|..|...++..|++++.+++ +++++++|++.+++.+.+. ..++++++++
T Consensus 100 a~~al~~~--~~-~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~ 175 (374)
T PRK02610 100 SDELIRSL--LI-ATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGR-DPETFEIDLAAAQSAIEQTQNPPVRVVFVV 175 (374)
T ss_pred hHHHHHHH--HH-HHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecC-CcccCCCCHHHHHHHHHhhcCCCceEEEEe
Confidence 99999874 22 3333465 8999999999999999999999999998 6656899999999888532 2578899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
|||||||.+++.+++++|+++| ++++||+||+|.+|.+.. ++..+ ...+++|+++||||+||+||+|+||+
T Consensus 176 ~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~------~~~~~-~~~~~~ivi~SfSK~~g~~GlRiG~~ 246 (374)
T PRK02610 176 HPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT------LVGEL-AQHPNWVILRTFSKAFRLAAHRVGYA 246 (374)
T ss_pred CCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc------hHHHH-hcCCCEEEEEecchhccCcccceeee
Confidence 9999999999999999999876 489999999999996431 22232 33468999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHH---Hhh--ccCCCccchh
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL---IRG--FYSNPPIHGA 472 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~---~r~--~~~~~p~~g~ 472 (583)
++ | +++++++.+.+ ...++|.+.|.++..++++. +.+.+..++.++++..+ ++. .+...|++|+
T Consensus 247 v~--~-----~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~ 315 (374)
T PRK02610 247 IG--H-----PELIAVLEKVR--LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWPSAAN 315 (374)
T ss_pred ec--C-----HHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCCcce
Confidence 98 7 58999998865 34567999999999999863 23333333333333322 222 2345688999
Q ss_pred hHHHHhcC
Q psy14428 473 RIVTEILS 480 (583)
Q Consensus 473 ~i~~~~l~ 480 (583)
|+|+++..
T Consensus 316 f~~~~l~~ 323 (374)
T PRK02610 316 FLYLRLSQ 323 (374)
T ss_pred EEEEeCCC
Confidence 99988754
No 60
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.4e-39 Score=348.45 Aligned_cols=304 Identities=16% Similarity=0.127 Sum_probs=228.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC----CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN----LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+++.|+|+.|.++. .|++.+.+.+++.+.+... ...+|++..|.++||++||+|+.+.+|+.+++++|++
T Consensus 28 ~~~~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~i-- 102 (416)
T PRK09440 28 RTPGAIMLGGGNPAH---IPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL-- 102 (416)
T ss_pred cCCCceeccCCCCCc---cCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE--
Confidence 346789999999852 1323467788877766532 2367999999999999999999988899999999999
Q ss_pred cCCchhHHHHHHHHHHHhCC-----CCCEEEE-cCCCChhhHHHHhhcCC----eEEEEecccCC--CCCCChhhHHHHH
Q psy14428 237 GISGSGSLRVGTAFLERFYP-----GVKTVYF-PTPTWNGHVRFCTDSRL----NVGAYRYFDNK--TNGLDFAGMMEDI 304 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~-----~gd~Vlv-~~P~y~~~~~~~~~~G~----~~~~v~~~d~~--~~g~d~~~l~~~l 304 (583)
|+|+++++.++. ..+++ +||.|++ ++|+|+.|...+...|. .+..+++ +++ .+++|++.++ +
T Consensus 103 t~Ga~~al~~~~---~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~--~ 176 (416)
T PRK09440 103 TNGSQSAFFYLF---NLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL-PEGQFKYHVDFEHLH--I 176 (416)
T ss_pred ccChHHHHHHHH---HHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccc-cccccccCCCHHHcc--c
Confidence 999999999863 34442 5899999 79999999886554332 1222333 222 3578888775 2
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
..+++++++||||||||.++|.+++++|+++|++++++||+||+|.++.... ...+.. ....+++|+++|||
T Consensus 177 ---~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~---~~~~~~--~~~~~~vI~~~SfS 248 (416)
T PRK09440 177 ---DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI---IFSEAT--PLWNPNIILCMSLS 248 (416)
T ss_pred ---CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc---chhhcC--ccccCCeEEEeccc
Confidence 4567899999999999999999999999999999999999999998654221 011110 11247999999999
Q ss_pred ccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhcc
Q psy14428 385 KNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFY 464 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~ 464 (583)
|+ ++||+|+||+++ | +++++++.........++|.+.|.+++.+++++.+.+++.
T Consensus 249 K~-~~pGlRiG~~i~--~-----~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~----------------- 303 (416)
T PRK09440 249 KL-GLPGVRCGIVIA--D-----EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSE----------------- 303 (416)
T ss_pred cc-CCCcceEEEEeC--C-----HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHH-----------------
Confidence 96 899999999999 7 5899999998887778899999999999998754333221
Q ss_pred CCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 465 SNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 465 ~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+.++..|.++++.+.+.|++.....++.+..+++|+|.|..++.
T Consensus 304 ----------------------------~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~ 347 (416)
T PRK09440 304 ----------------------------TVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKD 347 (416)
T ss_pred ----------------------------HHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCC
Confidence 11345556667777777766421112445678999999987764
No 61
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.2e-38 Score=339.23 Aligned_cols=303 Identities=12% Similarity=0.117 Sum_probs=241.3
Q ss_pred CCCCccccCCccccC-CCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRG-EDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~-~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+.+.|+|+.|.|.. +++ +++.+.+++.+.+... ...|++..|.++||+++++|++..+|+.+++++|++ |+|
T Consensus 28 ~~~~~i~l~~g~p~~~~~~---p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G 101 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQ---PPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TAA 101 (398)
T ss_pred cCCCeEEEeCCCCCcCCCC---CCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eCC
Confidence 346789999999953 222 4678888888776543 457999999999999999999998899999999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEE-ecccCCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAY-RYFDNKTNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++++.++ +..++++||+|++++|+|..+...++..|++++.+ ++ +++++.+|++.+++.+ .+++++++++|
T Consensus 102 ~~~al~~~---~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~-~~~~~~~d~~~l~~~~---~~~~~~v~l~~ 174 (398)
T PRK08363 102 VTEALQLI---FGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTI-EEEGWQPDIDDIRKKI---TEKTKAIAVIN 174 (398)
T ss_pred HHHHHHHH---HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccc-cccCCcCCHHHHHhhC---CcceEEEEEEC
Confidence 99999985 44567789999999999999999999999999988 45 5555668888888776 45778899999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.+++.+++++|+++|++++++||+||+|.++.+++ ...++.++ +...+||+++||||.|++||+|+||++
T Consensus 175 p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~ 250 (398)
T PRK08363 175 PNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSL-TKDVPVIVMNGLSKVYFATGWRLGYIY 250 (398)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHc-CcCCcEEEEecchhccCCccceEEEEE
Confidence 99999999999999999999999999999999999998865 23344444 234689999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhc---cccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHH
Q psy14428 399 VLTPTSDETERIMSQLKILIRG---FYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIV 475 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~ 475 (583)
+ +++ +++++.+...... ...++|.+.|.++..++.+.
T Consensus 251 ~--~~~---~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~----------------------------------- 290 (398)
T PRK08363 251 F--VDP---EGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGP----------------------------------- 290 (398)
T ss_pred E--eCc---HHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCC-----------------------------------
Confidence 7 322 3566665544321 23578889999888877541
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++|+.+.+.|++. || +.+..+++|+|.|..++.
T Consensus 291 -------------~~~l~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~g~~~~~~~l~~ 335 (398)
T PRK08363 291 -------------MDYLEEYMKKLKERRDYIYKRLNEI--PG-ISTTKPQGAFYIFPRIEE 335 (398)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHHhcC--CC-CEecCCCeEEEEEEEecc
Confidence 1124455666778888888888774 33 556678999999976653
No 62
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.7e-38 Score=338.48 Aligned_cols=324 Identities=17% Similarity=0.176 Sum_probs=250.6
Q ss_pred hhhHhhccccccC--CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCC
Q psy14428 148 KPLKQQLKGFNKD--PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFP 225 (583)
Q Consensus 148 ~~i~~l~~~~~~~--~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~ 225 (583)
+++..+...+++. .+.+.++|+.|.|... +...+++.+.+++.+.+.......|.+..|.++||++++++++...++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~-~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~ 92 (403)
T TIGR01265 14 NPIRAIVDNLKVKPNPEKPIIPLSHGDPSVF-GNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPG 92 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCCCCCcc-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCC
Confidence 3444444433322 3568899999998521 113356788888887775543467999999999999999999988888
Q ss_pred CCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHH
Q psy14428 226 AFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 226 ~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
.+++++|++ |+|+++++.++ +..++.+||+|++++|+|..+...++..|++++.+++..++++++|++.+++.+
T Consensus 93 ~~~~~~ii~--t~G~t~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~- 166 (403)
T TIGR01265 93 KLTADDVVL--TSGCSQAIEIC---IEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALA- 166 (403)
T ss_pred CCCHHHEEE--ecChHHHHHHH---HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHh-
Confidence 899999999 99999999985 444557799999999999999999999999999998832335789999998877
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 306 AMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ .+..++.++ +...++|+++||||
T Consensus 167 --~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~~~~vi~~~S~SK 241 (403)
T TIGR01265 167 --DEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASF-ASIVPVLSLGGISK 241 (403)
T ss_pred --CcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhh-ccCCcEEEEeeccc
Confidence 4567889999999999999999999999999999999999999999999875 234456665 33457999999999
Q ss_pred cccccCccceEEEEEcCCch-hH-HHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc
Q psy14428 386 NMGLYGERVGTFSVLTPTSD-ET-ERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF 463 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~-~~-~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~ 463 (583)
+|++||+|+||+++ ++++ .. +++++.+.+... ...+++.+.|.++..++++..
T Consensus 242 ~~~~pGlRiG~~v~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~---------------------- 296 (403)
T TIGR01265 242 RWVVPGWRLGWIII--HDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTP---------------------- 296 (403)
T ss_pred ccCCCcceEEEEEE--eCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhCh----------------------
Confidence 99999999999999 5431 00 124445554432 245789999999988886410
Q ss_pred cCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 464 YSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 464 ~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..+++++++++.++|+.+.+.|+.. || +.+..|++|+|.|..++.
T Consensus 297 -------------------------~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~~g~f~~~~~~~ 341 (403)
T TIGR01265 297 -------------------------QEFFDGKISVLKSNAELCYEELKDI--PG-LVCPKPEGAMYLMVKLEL 341 (403)
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHhcC--CC-ceecCCCceeEEEEeccc
Confidence 1224555666677888899988764 33 455678999999998864
No 63
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.3e-38 Score=337.67 Aligned_cols=308 Identities=15% Similarity=0.139 Sum_probs=234.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.++|+.|.+.. .+.+ +++.+.+++.+.... ...|+++.|.++||+++|+++..+....+++++|++ |+|+
T Consensus 31 ~~~~~i~l~~g~p~~-~~~~-~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G~ 104 (404)
T PRK09265 31 EGHKILKLNIGNPAP-FGFE-APDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYI--GNGV 104 (404)
T ss_pred cCCCeEEecCCCCCc-CCCC-CCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEE--eCCh
Confidence 456889999998853 2212 345566665544432 567999999999999999999876555789999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++++.++ +..++.+||+|++++|+|..+...++..|++++.+++ |. +++.+|++.+++.+ .+++++++++||
T Consensus 105 ~~~l~~~---~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~-~~~~~~~~d~~~l~~~~---~~~~~~v~l~~P 177 (404)
T PRK09265 105 SELIVMA---MQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLC-DEEAGWFPDLDDIRSKI---TPRTKAIVIINP 177 (404)
T ss_pred HHHHHHH---HHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEec-ccccCCCCCHHHHHHhc---cccceEEEEECC
Confidence 9999885 4456677999999999999999999999999999987 43 34668999988876 457889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|++++++||+||+|.++.+++ ...+++.++. ...++|+++||||+||+||+|+||+++
T Consensus 178 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~-~~~~vi~~~S~SK~~~~pGlRiG~~v~ 254 (404)
T PRK09265 178 NNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDG--AVHISIASLA-PDLLCVTFNGLSKAYRVAGFRVGWMVL 254 (404)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCC--CCcCCHHHcC-CCceEEEEecchhhccCcccceEEEEE
Confidence 9999999999999999999999999999999999999875 2344555542 334799999999999999999999997
Q ss_pred EcCCch-hHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 400 LTPTSD-ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 400 ~~p~~~-~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+.+. ..+.+++.+... .....++|.++|.++..++.+....
T Consensus 255 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~----------------------------------- 296 (404)
T PRK09265 255 --SGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSI----------------------------------- 296 (404)
T ss_pred --eCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhH-----------------------------------
Confidence 4221 112355555432 3455688999999999888642100
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++..+.++++.++|+.+.+.|+++ || +.+..+++|+|+|..++.
T Consensus 297 -----------~~~~~~~~~~~~~r~~~~~~L~~~--~~-~~~~~p~~g~~l~~~~~~ 340 (404)
T PRK09265 297 -----------NELILPGGRLYEQRDRAWELLNAI--PG-VSCVKPKGALYAFPKLDP 340 (404)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHhcC--CC-CcccCCCcceEEEEEecc
Confidence 001111123456678888888764 33 667789999999987764
No 64
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-39 Score=345.52 Aligned_cols=302 Identities=14% Similarity=0.068 Sum_probs=215.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCC-CCCCC-C--CCCeEEEecCC
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGE-DFPAF-K--DNRLAIVQGIS 239 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~-~g~~~-~--~~~I~i~~t~G 239 (583)
+.|+|+.|+|+.+ +++.+.++...+.. .+|+++.|.++||++|++++.++ .+... . +++|++ |+|
T Consensus 101 ~~i~l~~g~p~~~-----~~~~v~e~~~~~~~----~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~G 169 (527)
T PRK09275 101 DAVSYVRDQLGFD-----ADEFVYELVDGIIG----DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VEG 169 (527)
T ss_pred HHHhhcCCCCCCC-----CCHHHHHHHHHHhc----CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 4589999999743 45677776655532 35999999999999999965443 33222 2 349999 999
Q ss_pred chhHHHHHHHHHH--HhCCCCCEEEEcCCCChhhHHHHhhcC--CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEE
Q psy14428 240 GSGSLRVGTAFLE--RFYPGVKTVYFPTPTWNGHVRFCTDSR--LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFL 315 (583)
Q Consensus 240 ~~~al~l~~~~l~--~~~~~gd~Vlv~~P~y~~~~~~~~~~G--~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~ 315 (583)
+++|+..+...+. .+++|||+|++++|+|+.|..+++..| .++++++...++++.+|++.+++.+ .+++++++
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~---~~~tkai~ 246 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLR---DPSIKALF 246 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhc---CCCCCEEE
Confidence 9999998643321 367789999999999999999988775 5556666521234788888887765 67889999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHh--cCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQ--RHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~--~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR 393 (583)
++|||||||.++|.+++++|+++|++ ++++||+||+|.+|.+. ..++... ..+++|+++||||+|+++|||
T Consensus 247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~s~~~~--~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-----FRSLFAV--LPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-----ccCHHHh--CCCCEEEEeehhhhccCcHhH
Confidence 99999999999999999999999964 59999999999999853 2233332 246999999999999999999
Q ss_pred ceEEEEEcCCchhHHHHHHHH--------------------------------HHHHhccccCCChHHHHHHHHHhCChh
Q psy14428 394 VGTFSVLTPTSDETERIMSQL--------------------------------KILIRGFYSNPPIHGARIVTEILSDPK 441 (583)
Q Consensus 394 iG~lv~~~p~~~~~~~li~~l--------------------------------~~~~~~~~~~~s~~~q~~~~~~l~~~~ 441 (583)
+||+++ |+++.++++++.+ +++..+...++|.+.|.+++.
T Consensus 320 lG~i~~--~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al------ 391 (527)
T PRK09275 320 LGVIAL--HEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMAL------ 391 (527)
T ss_pred Hhhhhc--CchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHH------
Confidence 999999 7543333344444 233344444555555544210
Q ss_pred hhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q psy14428 442 LKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDH 521 (583)
Q Consensus 442 ~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~ 521 (583)
|....++... .+.++++++.++++|+.+.+.| +. .+..
T Consensus 392 -------------------------------~~~~all~~~------~~~~~~~~~~~~~Rr~~l~~~L---g~--~~~~ 429 (527)
T PRK09275 392 -------------------------------FSLFALLDEE------DAYKKAMKDIIRRRYKALYEGL---GL--PEPE 429 (527)
T ss_pred -------------------------------HHHHHHHhCc------hHHHHHHHHHHHHHHHHHHHHc---CC--CCcC
Confidence 0011111110 1236678888899999998887 21 1334
Q ss_pred ccccccceeecCCCh
Q psy14428 522 ITNQKGMFCYTGLSA 536 (583)
Q Consensus 522 ~~~~~g~f~~~~l~~ 536 (583)
..+++++|.|.+++.
T Consensus 430 ~~p~g~fY~~~di~~ 444 (527)
T PRK09275 430 DPNNAAYYTLIDLEE 444 (527)
T ss_pred CCCCeeEEEEEEhHH
Confidence 578999999987753
No 65
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=4.2e-39 Score=338.69 Aligned_cols=308 Identities=21% Similarity=0.240 Sum_probs=249.1
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHH-HhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCch
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERR-IYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISGS 241 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~-~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~~ 241 (583)
+.|+|+.|.+....+.+ +++.+.++..+ .........|++..|.++||+++|+++++..++.++++ +|++ ++|++
T Consensus 2 ~~I~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNP-PPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSSH-HHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHHH
T ss_pred CEEEEECCCCCCccccc-chHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--ecccc
Confidence 57899999997654443 44555555444 33334478999999999999999999998888999999 9999 99999
Q ss_pred hHHHHHHHHHHHh-CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC-C--CcEEEEeC
Q psy14428 242 GSLRVGTAFLERF-YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-E--RSILFLQT 317 (583)
Q Consensus 242 ~al~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-~--~~~~i~i~ 317 (583)
+++.++ +..+ ..+||+|++++|+|+.+...++..|++++.+++..++++++|++.+++.+++.. + ++++++++
T Consensus 79 ~~~~~~---~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~ 155 (363)
T PF00155_consen 79 AALFLL---LRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLIC 155 (363)
T ss_dssp HHHHHH---HHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEE
T ss_pred cchhhh---hhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeec
Confidence 999885 3445 556999999999999999999999999999998445568899999999997642 1 46899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
|||||||.+++.+++++|+++|++++++||+||+|.++.+++. +..+.....+...++|+++||||+||+||+|+||+
T Consensus 156 ~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i 233 (363)
T PF00155_consen 156 NPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP--DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYI 233 (363)
T ss_dssp SSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS--HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEE
T ss_pred ccccccccccccccccchhhhhcccccceeeeeceeccccCCC--ccCcccccccccccceeeeeccccccccccccccc
Confidence 9999999999999999999999999999999999999999862 33332333455567999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
++ + +++++.++........ +.+.|.++..++.+..
T Consensus 234 ~~--~-----~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~------------------------------------ 268 (363)
T PF00155_consen 234 VA--P-----PELIERLRRFQRSGLS--SSPMQAAAAAALSDPE------------------------------------ 268 (363)
T ss_dssp EE--E-----HHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHH------------------------------------
T ss_pred cc--h-----hhhhhhhhhccccccc--cchhhHHHHHhhhccc------------------------------------
Confidence 99 6 5899999887765544 8888888888776532
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChh
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 537 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~ 537 (583)
...++++++++++.++++.+.+.|++.+ +.+..+++|+|.|..++..
T Consensus 269 ---------~~~~~~~~~~~~l~~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~ 315 (363)
T PF00155_consen 269 ---------LVEKWLEELRERLRENRDLLREALEEIG----ITVLPPEAGFFLWVRLDPN 315 (363)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHHHTT----SEEEHHSBSSEEEEEESHH
T ss_pred ---------ccccccccchhhHHHHHHHHHHHHHHhh----hheeeccCccEEEEEcccc
Confidence 1122467788888999999999998874 6677788999999988775
No 66
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=3.5e-38 Score=335.99 Aligned_cols=288 Identities=17% Similarity=0.133 Sum_probs=211.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC----CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN----LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+++.++|+.|++... +++.+.+++.+.+.+. ...+|.|..|.++||+++|+++.+. .+++++|++
T Consensus 31 ~~~~~i~l~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~i-- 100 (402)
T TIGR03542 31 PSADIIRLGIGDTTQP-----LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFI-- 100 (402)
T ss_pred CCCCeEEcCCCCCCCC-----CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEE--
Confidence 3567899999987532 4577777777666541 2357999999999999999987543 288999999
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCC-----------eEEEEecccCCCCCCChhhHHHHHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRL-----------NVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~-----------~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
|+|+++++.++ +..+ .+||+|++++|+|..|..+++..|+ +++.+|+ +++ .+++++. .+
T Consensus 101 t~Ga~~al~~l---~~l~-~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~-~~~-~~~~~~~-~~--- 170 (402)
T TIGR03542 101 SDGAKCDVFRL---QSLF-GSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPC-TKE-NNFIPDL-PE--- 170 (402)
T ss_pred CCCcHHHHHHH---HHhc-CCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeec-chh-hCCCCCc-cc---
Confidence 99999999874 3333 5699999999999999999999999 9999998 432 1233221 11
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 306 AMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
..++++++++|||||||.++|.+++++|+++|++++++||+||+|.+|.+++ ..+.++..+....+++|+++||||
T Consensus 171 --~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK 246 (402)
T TIGR03542 171 --EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDP--SLPHSIFEIPGAKECAIEFRSFSK 246 (402)
T ss_pred --cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCC--CCCcchhhCCCCcccEEEEecCcc
Confidence 2467888899999999999999999999999999999999999999998865 122344443222468999999999
Q ss_pred cccccCccceEEEEEcCCchhHHHHH--------HHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHH
Q psy14428 386 NMGLYGERVGTFSVLTPTSDETERIM--------SQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLK 457 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~~~~~li--------~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~ 457 (583)
.||+||+|+||+++ | ++++ +.+.+.......++|.++|.++..++.++.++... +.++.+..++
T Consensus 247 ~~g~pGlRiG~~i~--~-----~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~ 318 (402)
T TIGR03542 247 TAGFTGVRLGWTVV--P-----KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPIL-EAISYYMENA 318 (402)
T ss_pred ccCCCCcceEEEEe--c-----HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHH-HHHHHHHHHH
Confidence 99999999999999 7 3555 23322233445578999999999999875543222 2222222222
Q ss_pred HH----Hhh-ccC-CCccchhhHHHHhcC
Q psy14428 458 IL----IRG-FYS-NPPIHGARIVTEILS 480 (583)
Q Consensus 458 ~~----~r~-~~~-~~p~~g~~i~~~~l~ 480 (583)
+. ++. .+. ..|.+|+|+|+++..
T Consensus 319 ~~~~~~L~~~~~~~~~~~~~~f~~v~l~~ 347 (402)
T TIGR03542 319 RILRKALEAAGFKVYGGEHAPYLWVKTPE 347 (402)
T ss_pred HHHHHHHHhcCceecCCCceeEEEEECCC
Confidence 22 221 233 345688899998864
No 67
>KOG0256|consensus
Probab=100.00 E-value=5.4e-38 Score=311.16 Aligned_cols=317 Identities=16% Similarity=0.203 Sum_probs=253.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCC--CCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDF--PAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT 276 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~ 276 (583)
...|.+..|.+.+|+++|+++.+.+| +.++|+++++ |+|++.+.+.+ +-.+++|||..+||.|.|+++..-++
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l---~fcLadpgdafLvPtPyY~gfdrdl~ 188 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETL---MFCLADPGDAFLVPTPYYPGFDRDLR 188 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHH---HHHhcCCCceeeecCCCCCcccccce
Confidence 45688999999999999999987665 6789999999 99999999985 34477789999999999999988777
Q ss_pred h-cCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccC
Q psy14428 277 D-SRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY 352 (583)
Q Consensus 277 ~-~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y 352 (583)
. .|+++++|.+...+++.++.+++|++++++ ..+.+-+++.||+||.|.+++++++..++++|.++++.+|+||+|
T Consensus 189 ~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIy 268 (471)
T KOG0256|consen 189 WRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIY 268 (471)
T ss_pred eccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhh
Confidence 6 489999999955566889999999998765 567889999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHH----hcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChH
Q psy14428 353 LGLTSGDFDKDAFSLRYFAK----EVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIH 428 (583)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~----~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~ 428 (583)
..-+|+. ....|+.+... ..++|.++.|+||.||+||+|+|.+.. .| +.++.+.++. ..+..+|+.
T Consensus 269 a~sVF~~--~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS--~n----e~VvsaA~km--ssf~~vSs~ 338 (471)
T KOG0256|consen 269 AGSVFDK--SEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYS--NN----EDVVSAATKM--SSFGLVSSQ 338 (471)
T ss_pred cccccCc--cCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEe--cC----hHHHHHHHHH--hhccCCcHH
Confidence 9999987 34555555432 357899999999999999999999998 55 4788877765 346678999
Q ss_pred HHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14428 429 GARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKS 508 (583)
Q Consensus 429 ~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~ 508 (583)
.|..++.+|.|.++.+ +.+++.++|++.+.+.+.+
T Consensus 339 tQ~~la~LLSD~~f~~---------------------------------------------~yl~en~~Rl~~rh~~~~~ 373 (471)
T KOG0256|consen 339 TQYLLASLLSDEEFTR---------------------------------------------EYLRENNKRLRIRHRYIVE 373 (471)
T ss_pred HHHHHHHHhchHHHHH---------------------------------------------HHHHHHHHHHHHHHHHHHh
Confidence 9999999998854322 2266778888999999999
Q ss_pred HHHhcCCCCCcccccccccceeecCCC----hhhhhhhhhhhhHHHHHHHHhhcCCCccccccccCCcce--eecCCCCC
Q psy14428 509 KILDKGSKKNWDHITNQKGMFCYTGLS----ASQGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMF--CYTGLSAS 582 (583)
Q Consensus 509 ~L~~~~~pg~~~~~~~~~g~f~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 582 (583)
.|+++++| +...++|+|+|.++. ....+. ...|.+.+-..++-.-|++.-.|+ ++-||| ||+-++++
T Consensus 374 gLk~lgI~----cl~s~AGlF~wvDlr~lL~s~tfe~--El~Lw~~i~~~vklnlSpG~s~~C-~EpGWFRvcFAn~~~~ 446 (471)
T KOG0256|consen 374 GLKALGIP----CLKSNAGLFCWVDLRKLLTSLTFEG--ELELWERILDNVKLNLSPGSSCHC-HEPGWFRVCFANMSEE 446 (471)
T ss_pred hHHhcCCc----eeecCCeeEEEEEhHHhcCcCChHH--HHHHHHHHHHhhccccCCCCccee-cCCCeEEEEeccCCHH
Confidence 99999865 889999999997643 222211 123455555555555566655554 444898 67766654
No 68
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=5.2e-38 Score=330.49 Aligned_cols=285 Identities=16% Similarity=0.129 Sum_probs=227.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC-CCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA-FKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~-~~~~~I~i~~t~G 239 (583)
...+.++|+.|+|..+ +++.+.+++.+... ..+|+++.|.++||+++|+|+.+.+|+. +++++|++ |+|
T Consensus 25 ~~~~~i~l~~~~p~~~-----~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~i--t~G 94 (364)
T PRK07865 25 HPDGIVDLSVGTPVDP-----VPPVIQEALAAAAD---APGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLP--VIG 94 (364)
T ss_pred cCCCEEEcCCCCCCCC-----CCHHHHHHHHHHHh---hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEE--ccC
Confidence 3456899999987521 34677777766542 3579999999999999999999888987 99999999 999
Q ss_pred chhHHHHHHHHHHHh-CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERF-YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++++.++ +..+ +.+||.|++++|+|+.|...++..|++++.++. ++. +. ..++++++++|
T Consensus 95 ~~~~i~~~---~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~~~----l~--~~~~~~v~~~~ 156 (364)
T PRK07865 95 SKELVAWL---PTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS---------LTE----LG--PQRPALIWLNS 156 (364)
T ss_pred hHHHHHHH---HHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------hhh----CC--cccceEEEEcC
Confidence 99999985 3334 567999999999999999999999999887742 111 11 14678888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH--HHhcCcEEEEecCcccccccCccceE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF--AKEVGQLCLAQSFSKNMGLYGERVGT 396 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~--~~~~~~vi~i~S~SK~~~l~GlRiG~ 396 (583)
||||||.+++.+++++|+++|++++++||+||+|.++.+++. ....+... ....+++|+++||||+|++||+|+||
T Consensus 157 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~ 234 (364)
T PRK07865 157 PSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--PVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGF 234 (364)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--CCccccccccCCccceEEEEeechhccCCCceeeEE
Confidence 999999999999999999999999999999999999988651 11111110 01246899999999999999999999
Q ss_pred EEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHH
Q psy14428 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVT 476 (583)
Q Consensus 397 lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~ 476 (583)
+++ | +++++++...+.....+++.+.|.++..++++..
T Consensus 235 i~~--~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----------------------------------- 272 (364)
T PRK07865 235 VAG--D-----PALVAELLEVRKHAGMMVPAPVQAAMVAALGDDA----------------------------------- 272 (364)
T ss_pred Eec--C-----HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHH-----------------------------------
Confidence 998 7 5899999988777777889999999988886521
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 477 EILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 477 ~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
+++++++.+.++|+.+.+.|++.+ +.+..+++|+|.|..++
T Consensus 273 --------------~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~ 313 (364)
T PRK07865 273 --------------HVREQRERYARRRAVLRPALEAAG----FRVDHSEAGLYLWATRG 313 (364)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHcC----CcccCCCccEEEEEeCC
Confidence 133445566778888888888753 55667889999998764
No 69
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=307.92 Aligned_cols=306 Identities=14% Similarity=0.118 Sum_probs=254.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++++.|++.++|.. .+|.+.+|+++..+.+ .++|+ .+..++-++|++|.+++++..+.++.|++ ++|.
T Consensus 23 g~~DvlPmWVADMDf~-----~pp~i~~Al~~rvdhG-vfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~V 92 (388)
T COG1168 23 GNEDVLPMWVADMDFP-----TPPEIIEALRERVDHG-VFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPGV 92 (388)
T ss_pred CCCCcceeeeecccCC-----CCHHHHHHHHHHHhcC-CCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCcc
Confidence 4579999999999854 6689999999988765 67886 78889999999999999999999999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCC--CCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKT--NGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~--~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
..++.+ +++.+.++||.|++.+|.|+++...++..|.+++..|+. +++ +.+|++.+++++. ..+.+++++||
T Consensus 93 Vpgi~~---~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~-~~~~~y~iD~~~LE~~~~--~~~vkl~iLCn 166 (388)
T COG1168 93 VPGISL---AIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLV-EDDGRYEIDFDALEKAFV--DERVKLFILCN 166 (388)
T ss_pred hHhHHH---HHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEecccc-ccCCcEEecHHHHHHHHh--cCCccEEEEeC
Confidence 999998 567788899999999999999999999999999999995 333 5569999999985 45579999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcccccccCccceEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
||||||.++++||+.+|.++|++||+.||+||+++|+.+.+. .+.++.++. .-.+++|.+.|.||+|+++|++++++
T Consensus 167 PHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~--~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~ 244 (388)
T COG1168 167 PHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH--KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI 244 (388)
T ss_pred CCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC--CccchhhcChhhhcceEEEeeccccccchhhhheeE
Confidence 999999999999999999999999999999999999999883 444454432 23478999999999999999999999
Q ss_pred EEEcCCchhHHHH-HHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHH
Q psy14428 398 SVLTPTSDETERI-MSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVT 476 (583)
Q Consensus 398 v~~~p~~~~~~~l-i~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~ 476 (583)
+. +|+ ++ .+-++++++....++|.++..|...+++++
T Consensus 245 Ii--~n~----~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G------------------------------------ 282 (388)
T COG1168 245 II--SNR----ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG------------------------------------ 282 (388)
T ss_pred Ee--cCH----HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc------------------------------------
Confidence 99 874 44 333334455667788888888887777653
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhh
Q psy14428 477 EILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGM 540 (583)
Q Consensus 477 ~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~ 540 (583)
+.| |.++.+-+...|+.+.+.|++.. |+ ..+..|+|.+..|.++.+-.+.
T Consensus 283 ---------~~W---Ld~L~~yl~~N~~~~~~~l~~~~-P~-v~v~~p~gTYL~WLD~r~l~l~ 332 (388)
T COG1168 283 ---------EPW---LDELLEYLKDNRDYVADFLNKHL-PG-VKVTEPQGTYLAWLDCRELGLD 332 (388)
T ss_pred ---------hHH---HHHHHHHHHHHHHHHHHHHHhhC-CC-cEEecCCCceeeeeeccccCCC
Confidence 245 45555666788889999888864 43 5678899999999876554443
No 70
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-37 Score=331.60 Aligned_cols=297 Identities=15% Similarity=0.141 Sum_probs=238.9
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.+.++|+.|.++.+ +++.+.+++.+... ...+|++..|.++||+++++++. .+++.+++++|++ |+|+++
T Consensus 30 ~~~i~l~~~~~~~~-----~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~~--t~G~~~ 99 (397)
T PRK07568 30 IKVYHLNIGQPDIK-----TPEVFFEAIKNYDE--EVLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILI--TNGGSE 99 (397)
T ss_pred CCEEEecCCCCCCC-----CCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEEE--cCChHH
Confidence 46789999998532 45788888776553 25789999999999999999998 5788899999999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCC-CChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNG-LDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g-~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++.++ +..++.+||+|++++|+|..+...++..|++++.+++ +.+ ++. .+++.+++.+ .+++++++++|||
T Consensus 100 al~~~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~g~~~~~~~~l~~~~---~~~~~~v~i~~p~ 172 (397)
T PRK07568 100 AILFA---MMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTT-KIEEGFHLPSKEEIEKLI---TPKTKAILISNPG 172 (397)
T ss_pred HHHHH---HHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeec-CcccCCCCCCHHHHHHhc---CccceEEEEECCC
Confidence 99985 3445677999999999999999999999999999998 432 222 2457777766 5678899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|++++++||+||+|.+|.+++ ....++.++.+..+++|+++||||+||+||+|+||+++
T Consensus 173 NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~- 249 (397)
T PRK07568 173 NPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDG--LKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLIS- 249 (397)
T ss_pred CCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCC--CCccChhhcCCCcCCEEEEecchhhccCCCcceEEEec-
Confidence 999999999999999999999999999999999999875 23445555433357999999999999999999999998
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
++ +++++++.+.... ..++|.+.|.+++.++++..
T Consensus 250 -~~----~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~--------------------------------------- 284 (397)
T PRK07568 250 -KN----KELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPE--------------------------------------- 284 (397)
T ss_pred -CC----HHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCH---------------------------------------
Confidence 65 4688877765443 45789999999988886421
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++..+.++|+.+.+.|++. +| +.+..+++|+|.|..++.
T Consensus 285 ---------~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~g~~~~~~~l~~ 328 (397)
T PRK07568 285 ---------SYFDEVREEYKKRRDILYEELNKI--PG-VVCEKPKGAFYIIAKLPV 328 (397)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHhcC--CC-ceecCCCcceEEEEecCC
Confidence 124556667788899999999775 23 455678999999988764
No 71
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.7e-38 Score=330.22 Aligned_cols=280 Identities=13% Similarity=0.108 Sum_probs=220.4
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..+.|+|+.|+++. + +++.+.+++.+.... . .|.|..|.++||++||+|++ +++++|++ |+|++
T Consensus 28 ~~~~i~l~~nen~~--~---~~~~v~~a~~~~~~~--~-~~Yp~~g~~~Lr~aia~~~~------~~~~~I~v--t~Gs~ 91 (366)
T PRK01533 28 DHSFVKLASNENPF--G---CSPRVLDELQKSWLD--H-ALYPDGGATTLRQTIANKLH------VKMEQVLC--GSGLD 91 (366)
T ss_pred CCceEEeCCCCCCC--C---CCHHHHHHHHHHHHh--c-CcCCCCCHHHHHHHHHHHhC------CCcceEEE--CCCHH
Confidence 35679999999752 2 557777777665433 2 34467899999999999983 67899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++.+||+|++++|+|+.|...++..|++++.+|+ +. +++|++.+++.+ .++++++++|||||
T Consensus 92 e~i~~~---~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~-~~--~~~d~~~l~~~~---~~~~~~v~i~~P~N 162 (366)
T PRK01533 92 EVIQII---SRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVAL-NN--GVYDLDEISSVV---DNDTKIVWICNPNN 162 (366)
T ss_pred HHHHHH---HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeec-CC--CCcCHHHHHHHh---CcCCcEEEEeCCCC
Confidence 999985 4456677999999999999999999999999999998 43 579999998877 45678899999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++++ ++|+||+|.+|.+++. ..+++. ..+..+++|+++||||+||+||+|+||+++
T Consensus 163 PTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~--~~~~~~-~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-- 236 (366)
T PRK01533 163 PTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD--FPETLP-LLEKHKNILVLRTFSKAYGLASFRVGYAVG-- 236 (366)
T ss_pred CCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc--CcchhH-HhccCCCEEEEeCchHHhcChHHHHhHHhC--
Confidence 9999999999999999998876 5667999999987541 122232 234567999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhh-HHHHHHHHHHHHhh-ccCCCccchhhHHHHhc
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDE-TERIMSQLKILIRG-FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~l~~~~r~-~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.+... ..++|.++|.++..+++++.+.++... .++..+.+...++. .+...|++|+|+|+.+.
T Consensus 237 ~-----~~~~~~l~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~~~nf~~~~~~ 309 (366)
T PRK01533 237 H-----EELIEKLNVVRL--PFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENEIPFYQSQTNFIFLPVE 309 (366)
T ss_pred C-----HHHHHHHHHhcC--CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCcCcEEEEeCC
Confidence 7 589999987653 468999999999999998665544433 22223333333332 35566778999999864
No 72
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.1e-37 Score=324.94 Aligned_cols=287 Identities=17% Similarity=0.105 Sum_probs=227.9
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC-CCCCCeEEEecC
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA-FKDNRLAIVQGI 238 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~-~~~~~I~i~~t~ 238 (583)
++.+..++|+.|+|..+ +++.+.+++.+... ...|+++.|.++||+++++|+++++|+. +++++|++ |+
T Consensus 18 ~~~~~~i~l~~~~p~~~-----~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~i--t~ 87 (357)
T TIGR03539 18 SHPDGIVDLSVGTPVDP-----VPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLP--VI 87 (357)
T ss_pred hCCCCeEEccCCCCCCC-----CCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEE--cc
Confidence 35567899999987522 35677777766542 4679999999999999999999988987 99999999 99
Q ss_pred CchhHHHHHHHHHHHh-CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeC
Q psy14428 239 SGSGSLRVGTAFLERF-YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQT 317 (583)
Q Consensus 239 G~~~al~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~ 317 (583)
|+++++.++ +..+ ..+||.|++++|+|+.+...++..|++++.++. ++. +. ..++++++++
T Consensus 88 G~~~~i~~~---~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---------~~~----l~--~~~~~~v~~~ 149 (357)
T TIGR03539 88 GTKELVAWL---PTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADD---------PTE----LD--PVGPDLIWLN 149 (357)
T ss_pred ChHHHHHHH---HHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccCC---------hhh----cC--ccCccEEEEe
Confidence 999999985 3334 577999999999999999999999998877632 111 11 2467888899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH--HHHhcCcEEEEecCcccccccCccce
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY--FAKEVGQLCLAQSFSKNMGLYGERVG 395 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~--~~~~~~~vi~i~S~SK~~~l~GlRiG 395 (583)
|||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. ....+.. .....+++|+++||||.|++||+|+|
T Consensus 150 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G 227 (357)
T TIGR03539 150 SPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR--PVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAG 227 (357)
T ss_pred CCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC--CccceecccCCCccccEEEEeccccccCCCceeEE
Confidence 9999999999999999999999999999999999999988651 1111110 01123689999999999999999999
Q ss_pred EEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHH
Q psy14428 396 TFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIV 475 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~ 475 (583)
|+++ | +++++++.+.......+++.+.|.++..++++..
T Consensus 228 ~~i~--~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---------------------------------- 266 (357)
T TIGR03539 228 FVAG--D-----PALVAELLTVRKHAGLMVPAPVQAAMVAALGDDG---------------------------------- 266 (357)
T ss_pred EEec--C-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHH----------------------------------
Confidence 9998 7 5899999888777777899999999988886521
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++..+.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 267 ---------------~~~~~~~~~~~~~~~~~~~L~~~g----~~~~~p~~~~~~~~~~~~ 308 (357)
T TIGR03539 267 ---------------HVAEQKARYAARRAQLKPALEKAG----FRIDHSEAGLYLWATRGE 308 (357)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHcC----CCCcCCCccEEEEEECCC
Confidence 133445566778888888887753 456678899999987743
No 73
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-37 Score=327.18 Aligned_cols=300 Identities=15% Similarity=0.192 Sum_probs=246.9
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
.+..++|+.|.++.+ +++.+.+++.+.+.+. ...|++..|.+.||+++|+++.+.+|..+++++|++ |+|++
T Consensus 30 ~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~ 101 (393)
T PRK05764 30 GRDVISLGAGEPDFD-----TPEHIKEAAIEALDDG-KTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIV--TTGAK 101 (393)
T ss_pred cCCEEEeCCCCCCCC-----CCHHHHHHHHHHHhcC-CCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEE--eCCcH
Confidence 467899999998632 4578888887777543 457999999999999999999888888899999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+++.++ +..++.+||.|++++|+|..+..+++..|++++.+++ ++ +++.+|++.+++.+ .+++++++++|||
T Consensus 102 ~a~~~~---~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~l---~~~~~~v~~~~p~ 174 (393)
T PRK05764 102 QALYNA---FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPT-GEENGFKLTVEQLEAAI---TPKTKALILNSPS 174 (393)
T ss_pred HHHHHH---HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEec-CcccCCcCCHHHHHHhh---CccceEEEEECCC
Confidence 999885 4455677999999999999999999999999999998 53 34678899998887 4577888999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH-HHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF-AKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~-~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
||||.+++.+++++|+++|++++++||+||+|.++.+++. ..+++.++ .+..+++|+++||||.+++||+|+||+++
T Consensus 175 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~ 252 (393)
T PRK05764 175 NPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG 252 (393)
T ss_pred CCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec
Confidence 9999999999999999999999999999999999988652 23344444 23457899999999999999999999998
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.........+++.+.|.++..++++. .
T Consensus 253 --~-----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~--~------------------------------------ 287 (393)
T PRK05764 253 --P-----KELIKAMSKLQSHSTSNPTSIAQYAAVAALNGP--Q------------------------------------ 287 (393)
T ss_pred --C-----HHHHHHHHHHHhhcccCCChHHHHHHHHHHcCC--h------------------------------------
Confidence 7 589999998887777889999999988887631 0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++.+.++++.+.+.|++. || +.+..+++|+|.|..++.
T Consensus 288 ----------~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~g~~~~~~~~~~ 331 (393)
T PRK05764 288 ----------DEVEEMRQAFEERRDLMVDGLNEI--PG-LECPKPEGAFYVFPNVSK 331 (393)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHhhC--CC-CcccCCCcceEEEEeccc
Confidence 123445556677788888888875 33 556678999999987764
No 74
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=6.1e-37 Score=320.87 Aligned_cols=284 Identities=16% Similarity=0.167 Sum_probs=220.4
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.++|+.+.+.. + +++.+.+++.+.... ..+|++ .|.++||+++|+|+. +++++|++ |+|+++
T Consensus 19 ~~~~~l~~~~~~~--~---~p~~~~~a~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~~------~~~~~i~i--t~Ga~~ 82 (354)
T PRK06358 19 NMILDFSANINPL--G---VPESLKQAITENLDK--LVEYPD-PDYLELRKRIASFEQ------LDLENVIL--GNGATE 82 (354)
T ss_pred cceEEecCCCCCC--C---CCHHHHHHHHHHHHh--hhcCCC-ccHHHHHHHHHHHhC------CChhhEEE--CCCHHH
Confidence 3468999988642 2 357788887776543 566865 578999999999983 78999999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
++.++ +..+ . +++|++++|+|+.|...++..|++++.+++ +++ ++++| +.+.+.+ .+++++++++||||
T Consensus 83 ~l~~~---~~~~-~-~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~d-~~~~~~~---~~~~~~v~~~~P~N 152 (354)
T PRK06358 83 LIFNI---VKVT-K-PKKVLILAPTFAEYERALKAFDAEIEYAEL-TEETNFAAN-EIVLEEI---KEEIDLVFLCNPNN 152 (354)
T ss_pred HHHHH---HHHh-C-CCcEEEecCChHHHHHHHHHcCCeeEEEeC-ccccCCCcc-HHHHHhh---ccCCCEEEEeCCCC
Confidence 99986 3334 3 368999999999999999999999999998 433 45677 5555555 34678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++++++||+||+|.+|.+++. ..+++.. .+..++||+++||||+||+||+|+||+++
T Consensus 153 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~-~~~~~~vi~~~S~SK~~gl~G~RiG~lv~-- 227 (354)
T PRK06358 153 PTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENE--TISMINY-LENFKNLIIIRAFTKFFAIPGLRLGYGLT-- 227 (354)
T ss_pred CCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCcc--chhHHHh-ccCCCCEEEEEechhhccCcchhheeeec--
Confidence 999999999999999999999999999999999998752 2223333 35567999999999999999999999998
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
++ +.+++++.+... ..+++.++|.++..++++..
T Consensus 228 ~~----~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~---------------------------------------- 261 (354)
T PRK06358 228 SN----KNLAEKLLQMRE--PWSINTFADLAGQTLLDDKE---------------------------------------- 261 (354)
T ss_pred CC----HHHHHHHHHhCC--CCcchHHHHHHHHHHhccHH----------------------------------------
Confidence 65 367888887654 45778999999988886521
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+++++++.+.++|+.+.+.|++. +| +.+..+++ .|.|..++.
T Consensus 262 ---------~~~~~~~~~~~~r~~l~~~L~~~--~~-~~~~~~~g-~f~~~~~~~ 303 (354)
T PRK06358 262 ---------YIKKTIQWIKEEKDFLYNGLSEF--KG-IKVYKPSV-NFIFFKLEK 303 (354)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHhcC--CC-cEEcCCcc-eEEEEEcCc
Confidence 13444555677888888888764 33 44455655 488887764
No 75
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-37 Score=324.74 Aligned_cols=257 Identities=21% Similarity=0.249 Sum_probs=207.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.++.++|+.|.|+. .+++.+.+++.+..... ...+|.+..|.++||+++++++.+.+++.+++++|++ |+|
T Consensus 32 ~~~~~~l~~g~p~~-----~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G 104 (394)
T PRK06836 32 ADNVFDFSLGNPSV-----PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCG 104 (394)
T ss_pred CCCeEEecCcCCCC-----CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCC
Confidence 45679999997642 15678888887776542 2577999999999999999999988888999999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..++.+||.|++++|+|..+...++..|++++.+++ +++++++|++.+++.+ .++++++++++|
T Consensus 105 ~~~al~~~---~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~~---~~~~~~v~~~~p 177 (394)
T PRK06836 105 AAGALNVA---LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPT-DTDTFQPDLDALEAAI---TPKTKAVIINSP 177 (394)
T ss_pred hHHHHHHH---HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEec-CCccCcCCHHHHHhhc---CcCceEEEEeCC
Confidence 99999985 4456677999999999999999999999999999999 6655789999998887 457889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh------cCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQ------RHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~------~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR 393 (583)
|||||.+++.+++++|+++|++ |+++||+||+|.+|.+++. ..+++. ...+++|+++||||+|++||+|
T Consensus 178 ~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~---~~~~~~i~~~S~SK~~~~pGlR 252 (394)
T PRK06836 178 NNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPYIF---KYYDNSIVVYSFSKSLSLPGER 252 (394)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCChH---HccCcEEEEecchhhccCccee
Confidence 9999999999999999999999 8999999999999998752 223332 2356899999999999999999
Q ss_pred ceEEEEEcCCch-hHHHHHHHHHHHHhcc-ccCCChHHHHHHHHHhCC
Q psy14428 394 VGTFSVLTPTSD-ETERIMSQLKILIRGF-YSNPPIHGARIVTEILSD 439 (583)
Q Consensus 394 iG~lv~~~p~~~-~~~~li~~l~~~~~~~-~~~~s~~~q~~~~~~l~~ 439 (583)
+||+++ ++.. ....++..+....+.. ..+++.+.|.++..++++
T Consensus 253 iG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 298 (394)
T PRK06836 253 IGYIAV--NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA 298 (394)
T ss_pred eEEEec--CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC
Confidence 999999 6311 0001122222222222 246788889988888876
No 76
>KOG0259|consensus
Probab=100.00 E-value=2.5e-36 Score=296.78 Aligned_cols=314 Identities=15% Similarity=0.133 Sum_probs=254.5
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
.+.+|.|+.|+|.. ++...+.+...+|+.+.++.+...+|.|..|.+.-|+|+|+|+.+...-.+++++|++ |+|.+
T Consensus 60 ~k~iipl~~GDPsv-~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~l--tsGC~ 136 (447)
T KOG0259|consen 60 KKPILPLGHGDPSV-YPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVL--TSGCS 136 (447)
T ss_pred CceeccCCCCCCCc-cccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEE--eccch
Confidence 34679999999964 4544466788888888888877889999999999999999999888888899999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
|||+++ +..+.+||..|++|.|+|+.|...+...|.++..+++..+.+|.+|++.+++.+ .++|.++++.||||
T Consensus 137 qAIe~~---i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~---DENT~AivviNP~N 210 (447)
T KOG0259|consen 137 QAIELA---ISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALA---DENTVAIVVINPNN 210 (447)
T ss_pred HHHHHH---HHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhh---ccCeeEEEEeCCCC
Confidence 999995 556677899999999999999999999999999999866678999999998887 78999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|+|.++|.+.+++|++.|+++++.||.||+|.++.|++ .+..++.+|. .--.||.++|+||.|=.||||+||++.
T Consensus 211 PcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~fs-siVPVitlggisKrW~VPGWRlGWi~~-- 285 (447)
T KOG0259|consen 211 PCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKFS-SIVPVITLGGISKRWIVPGWRLGWIAL-- 285 (447)
T ss_pred CCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhcc-ccCceEeecccccccccCCceeeeEEE--
Confidence 99999999999999999999999999999999999998 5677787764 346899999999999999999999999
Q ss_pred CCchh-H--HHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 402 PTSDE-T--ERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 402 p~~~~-~--~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
.|+.. + ..+++.+.+..+ ...+++++.|.|+-.+|+.-.
T Consensus 286 hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp------------------------------------- 327 (447)
T KOG0259|consen 286 HDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTP------------------------------------- 327 (447)
T ss_pred ecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhCh-------------------------------------
Confidence 66531 0 123344444432 346788888988888876310
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQG 539 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~ 539 (583)
+++ .....+-++..-++..+.|++. ||-.-..+|++.||.|..++-+-+
T Consensus 328 -------~ef---F~k~~~~lk~na~l~y~~Lk~I--P~l~cp~kPeg~mylmv~l~~s~~ 376 (447)
T KOG0259|consen 328 -------EEF---FDKKLSFLKSNADLCYSRLKDI--PCLTCPVKPEGCMYLMVKLNLSLF 376 (447)
T ss_pred -------HHH---HHHHHHHHHhhHHHHHHHHhcC--CCcccCcCCCcceEEEeccchhhh
Confidence 000 1112223345666777777763 542226789999999988876644
No 77
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=9.1e-37 Score=327.92 Aligned_cols=356 Identities=13% Similarity=0.048 Sum_probs=239.2
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHH-HHHhCCCCCC-CCCC--CeEEEecCC
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAA-QLAYGEDFPA-FKDN--RLAIVQGIS 239 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia-~~~~~~~g~~-~~~~--~I~i~~t~G 239 (583)
+.|+++.|+++.+ +++.+.++...+.. .+|+++.|.+++|++++ +|+.+..+.. .+++ +|++ |+|
T Consensus 95 ~~i~l~~g~p~~~-----~~~~~~~~~~~~~~----~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~G 163 (521)
T TIGR03801 95 DIISYVIDQLGFD-----PDAFLYEMCDGIIG----DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VEG 163 (521)
T ss_pred HHHhhcCCCCCCC-----CCHHHHHHHHHhhc----CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 4589999999643 33555554444432 25988888888888887 4666554433 3444 8999 999
Q ss_pred chhHHHHHHHHH--HHhCCCCCEEEEcCCCChhhHHHHhhc--CCeEEEEecccCC-C-----CCCChhhHHHHHHcCCC
Q psy14428 240 GSGSLRVGTAFL--ERFYPGVKTVYFPTPTWNGHVRFCTDS--RLNVGAYRYFDNK-T-----NGLDFAGMMEDIKAMPE 309 (583)
Q Consensus 240 ~~~al~l~~~~l--~~~~~~gd~Vlv~~P~y~~~~~~~~~~--G~~~~~v~~~d~~-~-----~g~d~~~l~~~l~~~~~ 309 (583)
+++|+.++...+ ..+++|||+|++++|+|+.|..+++.. |++++.++. +++ + +.+|++.+++.+ .+
T Consensus 164 at~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~-~~~~~~g~~~~~~d~~~l~~~~---~~ 239 (521)
T TIGR03801 164 GTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKA-DEMTEDGTHTWQYPDKELEKLR---DP 239 (521)
T ss_pred HHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeec-ccccccccccCCCCHHHHHHhc---CC
Confidence 999999864332 126778999999999999999997775 678888887 432 2 668888887654 57
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc
Q psy14428 310 RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR--HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~--~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 387 (583)
++++++++|||||||.++|.+++++|+++|++| +++||+||+|.+|.++ ..++.+. ..+++|+++||||+|
T Consensus 240 ~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~sl~~~--~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 240 SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-----FRSLFAE--LPYNTIGVYSFSKYF 312 (521)
T ss_pred CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-----ccchhhh--CCCCEEEEEcchhhc
Confidence 889999999999999999999999999999986 9999999999999863 2233332 246899999999999
Q ss_pred cccCccceEEEEEcCCchhHHHHHHHH--------------------------------HHHHhccccCCChHHHH----
Q psy14428 388 GLYGERVGTFSVLTPTSDETERIMSQL--------------------------------KILIRGFYSNPPIHGAR---- 431 (583)
Q Consensus 388 ~l~GlRiG~lv~~~p~~~~~~~li~~l--------------------------------~~~~~~~~~~~s~~~q~---- 431 (583)
|+||||+||+++ ++++.++++++.| +++..+...+.|.+.|.
T Consensus 313 g~~G~RlG~i~~--~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al 390 (521)
T TIGR03801 313 GATGWRLGTIAL--HKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMAL 390 (521)
T ss_pred cCchhhhhhhhc--CchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHH
Confidence 999999999999 7543333344322 44566667888898887
Q ss_pred -HHHHHhCChhhhhhhhhHHHHHHHHHHHH-hh-ccC---CCccchhhHHHHhcCChh--HHHHHHHHHHHHHHHHHHHH
Q psy14428 432 -IVTEILSDPKLKAQCDETERIMSQLKILI-RG-FYS---NPPIHGARIVTEILSDPK--LKAQWFEECKGMSNRISSIR 503 (583)
Q Consensus 432 -~~~~~l~~~~~~~~~~~~~~~~~~l~~~~-r~-~~~---~~p~~g~~i~~~~l~~~~--~~~~~~~~l~~~~~~~~~~r 503 (583)
++..+++.+ +...+..++.+.++++.+ +. .+. .+|.+|.|+|..+..-.. ....+.+.+. +.+ ...
T Consensus 391 ~a~~all~~~--~~y~~~~~~~~~~R~~~l~~~Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~---~~~-~~~ 464 (521)
T TIGR03801 391 FSLFALMDKE--NAYKAETKDICRRREKLLFRGLGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLK---KNY-SPV 464 (521)
T ss_pred HHHHHHhccc--hhHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHh---ccC-CHH
Confidence 344555532 223344444455454443 22 122 457778888887653100 0011111111 111 234
Q ss_pred HHHHHHHHhc---CCCCC-cccccccccceeecCCChhhhhhhhhhhhHHHH
Q psy14428 504 EELKSKILDK---GSKKN-WDHITNQKGMFCYTGLSASQGMSNRISSIREEL 551 (583)
Q Consensus 504 ~~l~~~L~~~---~~pg~-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~ 551 (583)
+++.+.+++. ..||. |. ......+++++.++++++++.. .++++-+
T Consensus 465 ~~~~~L~~e~gV~v~PG~~Fg-~~~~~vRisla~l~~~~~~~~~-~rl~~~~ 514 (521)
T TIGR03801 465 DVLFRLAEETGIVLLPGGGFG-GPEWSVRVSLANLNEYDYAEIG-RAIRKIL 514 (521)
T ss_pred HHHHHHHHhCCEEEeCchhcC-CCCCeEEEEecCCCHHHHHHHH-HHHHHHH
Confidence 4555555552 36876 43 2344688999988888776633 4444444
No 78
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.3e-37 Score=321.48 Aligned_cols=245 Identities=14% Similarity=0.100 Sum_probs=202.6
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhcc--CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK--NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..++|+.++++.. +++.+.+++.+.+.. .....|+ ..|.++||++||+|+.+.+|+.+++++|++ |+|++
T Consensus 27 ~~i~l~~~~~~~~-----~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~ 98 (368)
T PRK03317 27 VPVRLNTNENPYP-----PSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSN 98 (368)
T ss_pred ceeEecCCCCCCC-----CCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHH
Confidence 4588999987532 567888888776543 1245675 468999999999999999899999999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++++||.|++++|+|+.|...++..|.+++.++. + +++++|++.+++++.+ .++++++++||||
T Consensus 99 ~~l~~~---~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~-~-~~~~~d~~~l~~~~~~--~~~~~i~l~~p~N 171 (368)
T PRK03317 99 EILQQL---LQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR-A-ADFTLDVDAAVAAIAE--HRPDVVFLTSPNN 171 (368)
T ss_pred HHHHHH---HHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc-C-CCCCCCHHHHHHHHhc--cCCCEEEEeCCCC
Confidence 999985 5566778999999999999999999999999999887 3 3479999999988852 3567888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++| +++||+||+|.+|.+++ .. +...+.+..+++|+++||||.||+||+|+||+++
T Consensus 172 PtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~---~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~-- 242 (368)
T PRK03317 172 PTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSG---TP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA-- 242 (368)
T ss_pred CCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccC---Cc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhC--
Confidence 999999999999998887 68999999999998764 12 2223334456899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++.+.+.. ...++|.++|.++..++++
T Consensus 243 ~-----~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~ 273 (368)
T PRK03317 243 A-----PAVVDALRLVR--LPYHLSAVTQAAARAALRH 273 (368)
T ss_pred C-----HHHHHHHHhcC--CCCCCCHHHHHHHHHHhhC
Confidence 7 58899888654 3457889999998888865
No 79
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-36 Score=319.45 Aligned_cols=277 Identities=19% Similarity=0.174 Sum_probs=211.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
...+.++|+.|+++.. +++.+.+++.+.... ...|+ ..|.++||++||+++. +++++|++ |+|+
T Consensus 28 ~~~~~i~l~~~~~~~~-----~~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~~------~~~~~I~i--t~G~ 91 (357)
T PRK14809 28 DPDDLVKLSSNENPHG-----PSPAAVEAIREAAER--VHSYP-KASHADLTAALADRWD------VSPEQVWL--ANGG 91 (357)
T ss_pred CccceeEecCCCCCCC-----CCHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHhC------CCcceEEE--CCCH
Confidence 3457899999988532 446677777665543 45685 4789999999999983 68999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..++++||.|++++|+|..|...++..|++++.+++..++++.++.+.+.+.. +++++++++|||
T Consensus 92 ~~al~~~---~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~----~~~k~i~l~~p~ 164 (357)
T PRK14809 92 DGALDYL---ARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY----DGERIVYLTSPH 164 (357)
T ss_pred HHHHHHH---HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh----cCCcEEEEeCCC
Confidence 9999985 455677899999999999999999999999999999832233555666555433 356788889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|++ +++||+||+|.+|.+++ . .+.. .+..++||+++||||+||+||+|+||+++
T Consensus 165 NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~---~--~~~~-~~~~~~vi~~~SfSK~~~~~GlRiG~~~~- 236 (357)
T PRK14809 165 NPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP---S--AVAL-VEERDDVAVLRTFSKAYGLAGLRLGYAVV- 236 (357)
T ss_pred CCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc---h--hHHH-HhhCCCEEEEecchhHhcCcchhheeeec-
Confidence 999999999999999999875 78999999999998643 1 2222 34467999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhcc--CCCccchhhHHHHh
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFY--SNPPIHGARIVTEI 478 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~--~~~p~~g~~i~~~~ 478 (583)
| +++++++.+.. ...+++.++|.++..++.+.. ++++.++.+..+++.+...+ ...|.+|+|+|+++
T Consensus 237 -~-----~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~~~~---~~~~~~~~~~~~r~~l~~~L~~~~~~~~g~f~~~~~ 305 (357)
T PRK14809 237 -P-----EEWADAYARVN--TPFAASELACRAGLAALDDDE---HVERTVETARWAREYIREELDAPTWESAGNFVLAEV 305 (357)
T ss_pred -C-----HHHHHHHHHhC--CCCCCCHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHhcCccCCCCCCEEEEEC
Confidence 7 57899888764 346789999999999987633 33333333333333332222 13467899999876
Q ss_pred c
Q psy14428 479 L 479 (583)
Q Consensus 479 l 479 (583)
.
T Consensus 306 ~ 306 (357)
T PRK14809 306 G 306 (357)
T ss_pred C
Confidence 3
No 80
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-36 Score=316.01 Aligned_cols=285 Identities=19% Similarity=0.182 Sum_probs=221.8
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
.++.++|+.|.+. .+ +++.+.+++.+.... ..+|++..| .+||+++|++++ +++++|++ |+|++
T Consensus 35 ~~~~i~l~~~~~~--~~---~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~~------~~~~~i~~--t~G~~ 98 (371)
T PRK05166 35 VPRIAKLGSNENP--LG---PSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAARTG------VPADRIIL--GNGSE 98 (371)
T ss_pred CcceEEcCCCCCC--CC---CCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHH
Confidence 4578999999874 22 457788887765432 567999999 499999999873 56899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++.+||.|++++|+|+.+...++..|++++.+++ ++ ++++|++.+++.+ .+++++++++||||
T Consensus 99 ~~l~~~---~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~~~~~l~~~~---~~~~~~v~l~~p~N 170 (371)
T PRK05166 99 DLIAVI---CRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTV-TP-DLGFDLDALCAAV---ARAPRMLMFSNPSN 170 (371)
T ss_pred HHHHHH---HHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeec-CC-CCCCCHHHHHHhh---hcCCCEEEEeCCCC
Confidence 999985 4445677999999999999999999999999999998 54 3789999998877 34567888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++ +++||+||+|.+|.+++. .+..+..+.+..++||+++||||.||+||+|+||+++
T Consensus 171 PtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~-- 245 (371)
T PRK05166 171 PVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD--YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV-- 245 (371)
T ss_pred CCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC--cccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec--
Confidence 99999999999999999875 889999999999996541 1222333323456899999999999999999999887
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
++ +++++.+.+... ..+++.++|.++...+.+..
T Consensus 246 ~~----~~l~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~---------------------------------------- 279 (371)
T PRK05166 246 SD----PELVGLLDRVRT--PFNVNGAAQAAALAALDDEE---------------------------------------- 279 (371)
T ss_pred CC----HHHHHHHHHhcc--CCCCCHHHHHHHHHHhcCHH----------------------------------------
Confidence 54 478888876542 45688999988877776521
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
| +++.++.+.++|+.+.+.|++.+ +.. .+.+|+|.|..++
T Consensus 280 ------~---~~~~~~~~~~~r~~l~~~L~~~g----~~~-~p~~g~fl~~~~~ 319 (371)
T PRK05166 280 ------H---LAKGVALALAERERLKKELAEMG----YRI-APSRANFLFFDAR 319 (371)
T ss_pred ------H---HHHHHHHHHHHHHHHHHHHHHCc----Cee-CCCcCCEEEEeCC
Confidence 1 23334455677777888887753 332 4567888898764
No 81
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=9.3e-36 Score=312.89 Aligned_cols=277 Identities=16% Similarity=0.078 Sum_probs=204.5
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..+.++|+.+++. .+ +++.+.+++.+.... ...|+++ +.++||++||+|+ .+++++|++ |+|++
T Consensus 21 ~~~~i~l~~~~n~--~~---~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~i--t~G~~ 84 (360)
T PRK07392 21 PDAILDFSASINP--LG---PPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILP--GNGAA 84 (360)
T ss_pred cccEEEeCCcCCC--CC---CCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEE--CCCHH
Confidence 3467999988764 22 457777777765543 5678765 4689999999998 378899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCC-C---CCChhhHHHHHHcCCCCcEEEEeC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKT-N---GLDFAGMMEDIKAMPERSILFLQT 317 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~-~---g~d~~~l~~~l~~~~~~~~~i~i~ 317 (583)
+++.++ +..+.+ ||.|++++|+|..|...++..|++++.+|+ +.++ + ..+++.+++. .++++++++|
T Consensus 85 ~~i~~~---~~~l~~-g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~ 155 (360)
T PRK07392 85 ELLTWA---GRELAQ-LRAVYLITPAFGDYRRALRAFGATVKELPL-PLDQPSPGLTLRLQTLPPQ----LTPNDGLLLN 155 (360)
T ss_pred HHHHHH---HHHhCC-CCeEEEECCCcHHHHHHHHHcCCeEEEEec-ccccCCcccccCHHHHHHh----ccCCCEEEEe
Confidence 999985 444554 889999999999999999999999999999 4432 1 1234444332 3567899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
|||||||.+++++++.+ +++++++ +|+||+|.+|.+++ ...++....+..+++|+++||||+||+||+|+||+
T Consensus 156 nP~NPTG~~~~~~~l~~---l~~~~~~-~IiDE~y~~~~~~~---~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~ 228 (360)
T PRK07392 156 NPHNPTGKLWSREAILP---LLEQFAL-VVVDEAFMDFLPPD---AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYA 228 (360)
T ss_pred CCCCCCCCCcCHHHHHH---HHHHCCE-EEEECchhhhccCc---cccchHHHhhcCCCEEEEEechhhhcCCchheeee
Confidence 99999999999776655 4567776 56699999998865 22233333455679999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhh-HHHHHHHHHHHHhh--ccCCCccchhhH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDE-TERIMSQLKILIRG--FYSNPPIHGARI 474 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~l~~~~r~--~~~~~p~~g~~i 474 (583)
++ | +++++++.+.. ...++|.++|.++..+++++.+.++..+ .+..++.+...++. .+...|++|+|+
T Consensus 229 v~--~-----~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl 299 (360)
T PRK07392 229 IA--H-----PDRLQRWQQWR--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFL 299 (360)
T ss_pred eC--C-----HHHHHHHHhhC--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEE
Confidence 99 7 57888887654 3467899999999999998766654332 22222222222332 344567889999
Q ss_pred HHHhc
Q psy14428 475 VTEIL 479 (583)
Q Consensus 475 ~~~~l 479 (583)
|+++.
T Consensus 300 ~~~~~ 304 (360)
T PRK07392 300 LVQSQ 304 (360)
T ss_pred EEEcC
Confidence 87654
No 82
>KOG0634|consensus
Probab=100.00 E-value=8.2e-36 Score=298.15 Aligned_cols=277 Identities=17% Similarity=0.211 Sum_probs=234.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHh-CCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAY-GEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD 277 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~-~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~ 277 (583)
.++|++..|.++|+..|.++.. ..+.......+|++ |+|.+.+++. +++.++++||.|+++.++|+......+.
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~---~l~~~~N~gd~vlie~~ty~~AL~s~~a 167 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFK---VLRTLINRGDHVLIEEYTYPSALQSMEA 167 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHH---HHHHhhcCCCceEEecccchHHHHhccc
Confidence 6799999999999999999776 34445556669999 9999999998 5777888899999999999999999999
Q ss_pred cCCeEEEEecccCCCCCCChhhHHHHHHcCC-------CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q psy14428 278 SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-------ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDM 350 (583)
Q Consensus 278 ~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-------~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De 350 (583)
.|+++++|++ |. .|++++.+++.+..+. .+..+|.||+.|||||..+|.+++++|+++|+|||++|||||
T Consensus 168 ~gv~~ipv~m-d~--~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDd 244 (472)
T KOG0634|consen 168 LGVKIIPVKM-DQ--DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDD 244 (472)
T ss_pred cCceEEeccc-cC--CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecC
Confidence 9999999998 54 6999999999998762 256789999999999999999999999999999999999999
Q ss_pred cCCCCCCCCC------CCchHHHHHH----------HHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 351 AYLGLTSGDF------DKDAFSLRYF----------AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 351 ~Y~~l~~~~~------~~~~~~~~~~----------~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
+|.-+.++.. +.+..+...+ .|..+|||.+.||||.++ ||+|+||+.+ + ..+++++
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~--~-----~~~l~ri 316 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITG--N-----SLFLKRI 316 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeec--C-----HHHHHHH
Confidence 9999988731 1112221122 245689999999999998 9999999999 6 4789999
Q ss_pred HHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHH
Q psy14428 415 KILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKG 494 (583)
Q Consensus 415 ~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~ 494 (583)
.+.......++|.++|.++.++++... .+-|.+.+.+
T Consensus 317 l~~ae~~t~~pSg~sq~iv~a~l~~wg-------------------------------------------qeG~~~wi~~ 353 (472)
T KOG0634|consen 317 LDLAEVATSGPSGFSQGIVYAMLKRWG-------------------------------------------QEGFLRWIQH 353 (472)
T ss_pred hhhcceeecCcccccHHHHHHHHHHHH-------------------------------------------HHHHHHHHHH
Confidence 999999999999999999998886421 0235556888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCC-cccccccccceeecCCC
Q psy14428 495 MSNRISSIREELKSKILDKGSKKN-WDHITNQKGMFCYTGLS 535 (583)
Q Consensus 495 ~~~~~~~~r~~l~~~L~~~~~pg~-~~~~~~~~g~f~~~~l~ 535 (583)
++..|..+|+.+..+|.+.. |.. ..+..|.+|||.|+.++
T Consensus 354 l~~~Yt~Rrn~~l~Al~kyl-p~~~~~~~~P~aGmFiwv~i~ 394 (472)
T KOG0634|consen 354 LRSSYTERRNALLSALDKYL-PKSVCEYHPPKAGMFIWVEIP 394 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCeeEEecCCcceEEEEEec
Confidence 89999999999999999865 555 66788999999998876
No 83
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-35 Score=312.49 Aligned_cols=239 Identities=15% Similarity=0.137 Sum_probs=195.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
+.+..++|+.|++.. + +++.+.+++.+.... ..+|+++ +.++||++||+++. +++++|++ |+|+
T Consensus 30 g~~~~~~l~~~~~~~--~---~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~~------~~~~~I~i--t~G~ 93 (369)
T PRK08153 30 GRPFRARIGANESGF--G---PSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHHG------VAPENIMV--GEGI 93 (369)
T ss_pred CCcceeEecCCCCCC--C---CCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHhC------CCHHHEEE--cCCH
Confidence 344557999998752 2 456777777665432 4568776 58999999999983 67899999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..++.+||.|++++|+|+.+...++..|++++.+|+ +. .++|++.+++.+. ..+++++++||||
T Consensus 94 ~~~l~~~---~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~-~~--~~~~~~~l~~~~~--~~~~~~i~l~~P~ 165 (369)
T PRK08153 94 DGLLGLI---VRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPY-RD--DREDLDALLDAAR--RENAPLVYLANPD 165 (369)
T ss_pred HHHHHHH---HHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeC-CC--CCCCHHHHHHHhc--ccCCcEEEEeCCC
Confidence 9999985 4456677999999999999999999999999999998 44 3678888776553 3567888899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|++ +++||+||+|.+|.+++ ...++. ...+++|+++||||+||+||+|+||+++
T Consensus 166 NPtG~~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~---~~~~~~---~~~~~~i~~~SfSK~~g~~GlRiG~~v~- 237 (369)
T PRK08153 166 NPMGSWHPAADIVAFIEALPE-TTLLVLDEAYCETAPAG---AAPPID---TDDPNVIRMRTFSKAYGLAGARVGYAIG- 237 (369)
T ss_pred CCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCcc---cchhhh---hcCCCEEEEecchHhccCcchheeeeec-
Confidence 999999999999999998874 89999999999998764 222332 2356899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
| +++++.+.+.+.. .++|.+.|.++..++++
T Consensus 238 -~-----~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~~ 268 (369)
T PRK08153 238 -A-----PGTIKAFDKVRNH--FGMNRIAQAAALAALKD 268 (369)
T ss_pred -C-----HHHHHHHHHhhcC--CCCCHHHHHHHHHHhcC
Confidence 7 5899998876643 57899999999999875
No 84
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=2.4e-35 Score=334.84 Aligned_cols=304 Identities=13% Similarity=0.094 Sum_probs=231.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G 239 (583)
.+++.|+|+.|+++.. +++.+++++.+..... .+ ..|.+++|+++++++.+++|+++++ ++|++ |+|
T Consensus 695 ~g~~vI~LsinE~d~p-----pPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIv--t~G 762 (1082)
T PLN02672 695 QESSLIHMDVDESFLP-----VPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVY--GDT 762 (1082)
T ss_pred CCCCEEEEeCCCCCCC-----CCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEE--eCC
Confidence 4568899999998632 5678888887765331 22 4578899999999999999998875 58999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..++++||.|++++|+|+.|...++..|++++.+|+.+++++.+|++.+++.+.. .++++++++||
T Consensus 763 s~elL~ll---l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~--~~~~~I~L~nP 837 (1082)
T PLN02672 763 SLALFNKL---VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLET--VKKPWVYISGP 837 (1082)
T ss_pred HHHHHHHH---HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc--CCCCEEEEECc
Confidence 99999874 45567789999999999999999999999999999993234577888899888732 13457888999
Q ss_pred C-CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH---HHh---cCcEEEEecCcccccccCc
Q psy14428 320 H-NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF---AKE---VGQLCLAQSFSKNMGLYGE 392 (583)
Q Consensus 320 ~-NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~---~~~---~~~vi~i~S~SK~~~l~Gl 392 (583)
| ||||.+++.+++++|+++|++|+++||+||+|.++.|++......++.+. .+. ..+||+++||||.|++||+
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL 917 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH 917 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH
Confidence 6 99999999999999999999999999999999999997521111112211 111 2479999999999999999
Q ss_pred cceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchh
Q psy14428 393 RVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGA 472 (583)
Q Consensus 393 RiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~ 472 (583)
|+||+++ |+ +.+++++.+.... .++....|.++..++.-
T Consensus 918 RIGylIa--p~----~eLi~~l~~~~~~--s~~~~~~q~Aaaaalal--------------------------------- 956 (1082)
T PLN02672 918 EFGFLAL--ND----SVLIDAFHSAPGL--SRPHSTLKYTIKKLLGL--------------------------------- 956 (1082)
T ss_pred HheeEEe--CC----HHHHHHHHHhhhh--cCCCcHHHHHHHHHHHH---------------------------------
Confidence 9999999 75 3588888775432 22333445444433310
Q ss_pred hHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCC
Q psy14428 473 RIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGL 534 (583)
Q Consensus 473 ~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l 534 (583)
+.+ ....|.++++++++.+.++|+.+.+.|++.+ +.+..|++|+|.|..+
T Consensus 957 ------l~~--~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~G----i~v~~PeGGFfLwl~l 1006 (1082)
T PLN02672 957 ------KNQ--KSSDLLDGVAEQKKILKSRAERLKETLEACG----WDVLEPQGGISMVAKP 1006 (1082)
T ss_pred ------Hhc--cCcHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CeEecCCcEEEEEEEc
Confidence 000 0124667788889999999999999999864 5677899999999865
No 85
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-35 Score=311.37 Aligned_cols=239 Identities=19% Similarity=0.195 Sum_probs=198.3
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
+.++|+.+++. .+ +++.+.+++.+.... ..|.|..|.++||+++|+++. +++++|++ |+|++++
T Consensus 30 ~~i~l~~n~~~--~~---~~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~~------~~~~~i~~--t~G~~~~ 93 (359)
T PRK03158 30 KIVKLASNENP--YG---PSPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHLG------VDEEQLLF--GAGLDEV 93 (359)
T ss_pred ceEEecCCCCC--CC---CCHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHhC------CCHHHEEE--CCCHHHH
Confidence 67899998875 23 456788887766542 457788899999999999983 56899999 9999999
Q ss_pred HHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q psy14428 244 LRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPT 323 (583)
Q Consensus 244 l~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 323 (583)
+.++ +..++.+||.|++++|+|+.+...+...|++++.+|+ + ++++|++.+++.+ .+++++++++||||||
T Consensus 94 l~~~---~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~-~--~~~~d~~~l~~~~---~~~~~~v~i~~p~NPt 164 (359)
T PRK03158 94 IQMI---SRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPL-K--DGGHDLEAMLKAI---DEQTKIVWICNPNNPT 164 (359)
T ss_pred HHHH---HHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEec-C--CCCcCHHHHHHhc---CCCCCEEEEeCCCCCC
Confidence 9885 4445667999999999999999999999999999999 4 3688999988776 4577888899999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCC
Q psy14428 324 GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPT 403 (583)
Q Consensus 324 G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~ 403 (583)
|.+++.+++.++++.|+ ++++||+||+|.+|.+++. ...++.. .+..+++|+++||||+||+||+|+||+++ +
T Consensus 165 G~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~--~~~~~~~-~~~~~~vi~~~S~SK~~g~~GlRiG~~v~--~- 237 (359)
T PRK03158 165 GTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAED--YPDTLPL-LEKYENLIVLRTFSKAYGLAALRVGYGIA--S- 237 (359)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcc--cccHHHH-HHhcCCEEEEEechHhhcCcchhhehhcC--C-
Confidence 99999999999998874 6999999999999988642 1222333 35567999999999999999999999999 7
Q ss_pred chhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCCh
Q psy14428 404 SDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDP 440 (583)
Q Consensus 404 ~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~ 440 (583)
+++++++.+... ..++|.++|.++..+++++
T Consensus 238 ----~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~ 268 (359)
T PRK03158 238 ----EELIEKLNIARP--PFNTTRIAQYAAIAALEDQ 268 (359)
T ss_pred ----HHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCH
Confidence 588999887654 3578999999999999763
No 86
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-35 Score=310.06 Aligned_cols=279 Identities=18% Similarity=0.216 Sum_probs=220.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..+.|+|+.|++.. + +++.+.+++.+.. ....|++ .+.++||++||++++ +++++|++ |+|++
T Consensus 51 ~~~~i~l~~n~~p~--~---~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~~------~~~~~I~~--t~Ga~ 113 (380)
T PLN03026 51 PEDIVKLDANENPY--G---PPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDSG------LESENILV--GCGAD 113 (380)
T ss_pred ccceEEccCCCCCC--C---CCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHhC------cChhhEEE--cCCHH
Confidence 45789999998742 2 4466777765421 1234654 578999999999985 67899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++.+||+|++++|+|+.|...++..|++++.+++ ++ ++++|++.+++.+. .+++++++++||||
T Consensus 114 ~~i~~~---~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~~--~~~~~~v~l~~P~N 186 (380)
T PLN03026 114 ELIDLL---MRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPR-TP-DFSLDVPRIVEAVE--THKPKLLFLTSPNN 186 (380)
T ss_pred HHHHHH---HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec-CC-CCCcCHHHHHHHHh--ccCCcEEEEeCCCC
Confidence 999985 4455677999999999999999999999999999998 43 47899999988773 35678999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|++.+ ++||+||+|.+|.+++ .. . ...+..+++|+++||||.||++|+|+||+++
T Consensus 187 PTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~~--~-~~~~~~~~viv~~SfSK~~glaGlRiGy~~~-- 254 (380)
T PLN03026 187 PDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---SR--M-KWVKKYDNLIVLRTFSKRAGLAGLRVGYGAF-- 254 (380)
T ss_pred CCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---ch--H-HHHHhCCCEEEEecchHhhcCccccceeeec--
Confidence 999999999999998753 8999999999998753 11 2 2234568999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
+ +++++++.+.+. ..+++.++|.++..++++..
T Consensus 255 ~-----~~~i~~l~~~~~--~~~~~~~~q~aa~~aL~~~~---------------------------------------- 287 (380)
T PLN03026 255 P-----LSIIEYLWRAKQ--PYNVSVAAEVAACAALSNPK---------------------------------------- 287 (380)
T ss_pred C-----HHHHHHHHHhcC--CCCCCHHHHHHHHHHhhCHH----------------------------------------
Confidence 7 589999887664 35688999999888886521
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
| ++++++.+.++|+.+.+.|++++ .. ...+++|+|.|..++.
T Consensus 288 ------~---~~~~~~~~~~~r~~l~~~L~~~~---~~-~~~p~~~~f~~~~~~~ 329 (380)
T PLN03026 288 ------Y---LEDVKNALVEERERLFGLLKEVP---FL-EPYPSDANFILCRVTS 329 (380)
T ss_pred ------H---HHHHHHHHHHHHHHHHHHHHHCC---CC-eECCCCCeEEEEECCC
Confidence 1 33445566788888989988753 12 2357889999987763
No 87
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=3.3e-35 Score=309.25 Aligned_cols=276 Identities=17% Similarity=0.186 Sum_probs=214.9
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.++|+.+++.. + +++.+.+++.+.... ...|++.. .++||++|+++++ +++++|++ |+|+++
T Consensus 43 ~~~i~l~~~~~~~--~---~~~~~~~a~~~~~~~--~~~Y~~~~-~~~Lr~aia~~~~------v~~e~I~i--t~Gs~~ 106 (370)
T PRK09105 43 EGAVFLNANECPL--G---PSPAARDAAARSAAL--SGRYDLEL-EDDLRTLFAAQEG------LPADHVMA--YAGSSE 106 (370)
T ss_pred CCcEEecCCCCCC--C---CCHHHHHHHHHHHHH--hcCCCCch-HHHHHHHHHHHhC------cChhhEEE--cCChHH
Confidence 5678899888642 2 457777777665543 34586654 9999999999873 67899999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..++++||+|++++|+|+.|...++..|++++.+|+ ++ ++.+|++.+++. .++++++++||||||
T Consensus 107 ai~~~---~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~----~~~~~~v~l~nP~NP 177 (370)
T PRK09105 107 PLNYA---VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPL-RA-DGAHDVKAMLAA----DPNAGLIYICNPNNP 177 (370)
T ss_pred HHHHH---HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecC-CC-CCCCCHHHHHhc----CCCCCEEEEeCCCCC
Confidence 99985 4556677999999999999999999999999999998 44 467888888654 346788999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.++++++++.+ +++++||+||+|.+|... ++...+.+..+++|+++||||+||++|+|+||+++ +
T Consensus 178 TG~~~~~~~l~~l~~~~-~~~~~lIvDEaY~~f~~~------~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~--~ 248 (370)
T PRK09105 178 TGTVTPRADIEWLLANK-PAGSVLLVDEAYIHFSDA------PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAA--R 248 (370)
T ss_pred CCcCcCHHHHHHHHHhC-CCCcEEEEECchHHhccC------cchHHHHhhCCCEEEEecccHhhcCCccceeeeec--C
Confidence 99999999999999975 458999999999887532 13334445568999999999999999999999999 7
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCCh
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDP 482 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~ 482 (583)
+++++++.+. ...+++.+.|.++..++.++.
T Consensus 249 -----~~~i~~l~~~---~~~~~~~~~~~aa~~~L~~~~----------------------------------------- 279 (370)
T PRK09105 249 -----PDLLAKLARF---GHNPLPVPAAAAGLASLRDPK----------------------------------------- 279 (370)
T ss_pred -----HHHHHHHHhc---CCCCcCHHHHHHHHHHHhCHH-----------------------------------------
Confidence 5788888765 244578888888877776521
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCC
Q psy14428 483 KLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGL 534 (583)
Q Consensus 483 ~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l 534 (583)
| ++++++++.++|+.+.+.|++.+ +.+..+++++|. ..+
T Consensus 280 -----~---~~~~~~~~~~~r~~l~~~L~~~g----~~~~~~~~~f~~-~~~ 318 (370)
T PRK09105 280 -----L---VPQRRAENAAVREDTIAWLKKKG----YKCTPSQANCFM-VDV 318 (370)
T ss_pred -----H---HHHHHHHHHHHHHHHHHHHHHCC----CCcCCCCCcEEE-EeC
Confidence 1 34445556778888888888754 445567777764 444
No 88
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-35 Score=308.16 Aligned_cols=276 Identities=16% Similarity=0.194 Sum_probs=215.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.+.|+|+.|++.. + +++.+.+++.+...+. ...|++. |.++||++||++++ +++++|++ |+|+++
T Consensus 24 ~~~i~l~~~~~~~--~---~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~~------~~~~~I~i--t~G~~~ 88 (353)
T PRK05387 24 AKLIKLNTNENPY--P---PSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYYG------LDPEQVFV--GNGSDE 88 (353)
T ss_pred cceeeccCCCCCC--C---CCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHhC------CCHHHEEE--cCCHHH
Confidence 4679999999752 1 4578888887766532 4568655 67999999999984 67899999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..++++||.|++++|+|+.|...++..|++++.+|+ ++ ++++|++.+++ .+++++++|||||
T Consensus 89 al~~~---~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~-------~~~~v~~~~P~NP 156 (353)
T PRK05387 89 VLAHA---FLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPL-DD-DFSIDVEDYLR-------PNGGIIFPNPNAP 156 (353)
T ss_pred HHHHH---HHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeec-CC-CCCCCHHHHHh-------cCCEEEEeCCCCC
Confidence 99985 4456677999999999999999999999999999998 44 47889888753 3467889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.+++++|+++++ +++||+||+|.+|... ...++ .+..+++|+++||||+||+||+|+||+++ +
T Consensus 157 tG~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~~~~~---~~~~~~~i~~~S~SK~~~~~GlR~G~~~~--~ 225 (353)
T PRK05387 157 TGIALPLAEIERILAANP--DSVVVIDEAYVDFGGE----SAIPL---IDRYPNLLVVQTFSKSRSLAGLRVGFAIG--H 225 (353)
T ss_pred CCCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----chHHH---HhhCCCEEEEEehhHhhcchhhhceeeec--C
Confidence 999999999999998653 8999999999887421 22222 34457899999999999999999999998 7
Q ss_pred CchhHHHHHHHHHHHHhcc-ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 403 TSDETERIMSQLKILIRGF-YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
+++++++.+..... ..+++.+.|.++..++.+..
T Consensus 226 -----~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~---------------------------------------- 260 (353)
T PRK05387 226 -----PELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEA---------------------------------------- 260 (353)
T ss_pred -----HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHH----------------------------------------
Confidence 58999988876543 45688999999888876521
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
| ++++++++.++|+.+.+.|++.+ +.. .+.+|.|.|..++
T Consensus 261 ------~---~~~~~~~~~~~~~~l~~~L~~~g----~~~-~~~~~~~~~~~~~ 300 (353)
T PRK05387 261 ------Y---FEETRAKVIATRERLVEELEALG----FEV-LPSKANFVFARHP 300 (353)
T ss_pred ------H---HHHHHHHHHHHHHHHHHHHHHCC----CeE-CCCcCcEEEEECC
Confidence 1 22344555677888888887754 332 3566788887765
No 89
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-34 Score=301.33 Aligned_cols=230 Identities=13% Similarity=0.157 Sum_probs=180.9
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+.+.++|+.|+++. + +++.+.+++.+.........|++ .|.++||+++|+|+++.+ +++++|++ |+|++
T Consensus 18 ~~~~i~l~~~~~~~--~---~p~~~~~~~~~~~~~~~~~~Y~~-~~~~~Lr~aia~~~~~~~---~~~~~i~i--t~Ga~ 86 (335)
T PRK14808 18 KRDRTYLALNENPF--P---FPEDLVDEVFRRLNSDTLRIYYD-SPDEELIEKILSYLDTDF---LSKNNVSV--GNGAD 86 (335)
T ss_pred CCceeEecCCCCCC--C---CCHHHHHHHHHHhhhhhhhcCCC-CChHHHHHHHHHHhCCCC---CCcceEEE--cCCHH
Confidence 45789999999853 2 45777777766554332233654 489999999999998753 78999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..+ |.|++++|+|+.|...++..|++++.+|+ +++ +.++.. .+ .+++++++|||||
T Consensus 87 ~~i~~~---~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~-~~~-~~~~~~----~~----~~~~~i~i~nP~N 149 (335)
T PRK14808 87 EIIYVM---MLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPL-TKD-LRIPEV----NV----GEGDVVFIPNPNN 149 (335)
T ss_pred HHHHHH---HHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecC-CCc-CCCChh----Hc----cCCCEEEEeCCCC
Confidence 999986 3333 67999999999999999999999999998 543 333321 12 2468899999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++++++++|+ +++++||+||+|.+|... ...+ .....+++|+++||||+|++||+|+||+++
T Consensus 150 PTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~~~~---~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~-- 216 (335)
T PRK14808 150 PTGHVFEREEIERIL----KTGAFVALDEAYYEFHGE----SYVD---LLKKYENLAVIRTFSKAFSLAAQRIGYVVS-- 216 (335)
T ss_pred CCCCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----chHH---HHHhCCCEEEEEechhhccCcccceEEEEe--
Confidence 999999999998886 479999999999998521 2222 223457999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
| +++++++.+.+. ..+++.++|.++..++++
T Consensus 217 ~-----~~~~~~l~~~~~--~~~~~~~~q~a~~~~l~~ 247 (335)
T PRK14808 217 S-----EKFIDAYNRVRL--PFNVSYVSQMFAKVALDH 247 (335)
T ss_pred C-----HHHHHHHHHhcC--CCCCCHHHHHHHHHHHhC
Confidence 7 589999987653 367888999988777764
No 90
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-35 Score=305.92 Aligned_cols=277 Identities=16% Similarity=0.168 Sum_probs=214.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
+..++|+.|+++. + +++.+.+++.+.+.......|++. +.++||+++|++++ +++++|++ |+|+++
T Consensus 22 ~~~~~l~~~~~~~--~---~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~~------~~~~~i~i--t~G~~~ 87 (351)
T PRK14807 22 PYKYKMDANETPF--E---LPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYCS------VVPTNIFV--GNGSDE 87 (351)
T ss_pred CceeEccCCCCCC--C---CCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHhC------CCcccEEE--ecCHHH
Confidence 3558888888742 2 557888887776654335668754 47999999999973 67899999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..++++||+|++++|+|..+...++..|++++.+++ ++ ++++|++.+++.+. ..++++++++|||||
T Consensus 88 ~l~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~~--~~~~k~v~l~~p~NP 160 (351)
T PRK14807 88 IIHLI---MLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKL-KE-DYTYDVGSFIKVIE--KYQPKLVFLCNPNNP 160 (351)
T ss_pred HHHHH---HHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeec-CC-CCCCCHHHHHHHhh--ccCCCEEEEeCCCCC
Confidence 99985 4446677999999999999999999999999999998 53 47899999988874 236788889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.++++++++ +++.++|+||+|.++. +. ...++ .+..+++|+++||||+||+||+|+||+++ |
T Consensus 161 tG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~~-~~---~~~~~---~~~~~~vi~~~S~SK~~~~~GlRiG~~v~--~ 228 (351)
T PRK14807 161 TGSVIEREDIIKIIE---KSRGIVVVDEAYFEFY-GN---TIVDV---INEFENLIVLRTLSKAFGLAGLRVGYAVA--N 228 (351)
T ss_pred CCCCCCHHHHHHHHH---hCCCEEEEeCcchhhc-cc---chHHH---hhhCCCEEEEecchHhcccchhceeeeec--C
Confidence 999999999887765 4567899999999884 32 22222 24457999999999999999999999999 7
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh--ccCCCccchhhHHHHhc
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG--FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~--~~~~~p~~g~~i~~~~l 479 (583)
+++++++...+. ..+++.++|.++..+++++.++++++..++....+.+.++. .+...|++|.|+|+++.
T Consensus 229 -----~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~i~~~ 300 (351)
T PRK14807 229 -----ENILKYLNLVKS--PYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK 300 (351)
T ss_pred -----HHHHHHHHHccC--CCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccEEEEEcC
Confidence 689999987654 35678999999999999877766665544333333333332 34456778889987664
No 91
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.8e-34 Score=302.57 Aligned_cols=283 Identities=11% Similarity=0.109 Sum_probs=214.4
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..+.++|+.|+++ .+ +++.+.+++.+.... ...|++ .+.++||++||+++. +++++|++ |+|++
T Consensus 19 ~~~~i~l~~~~~~--~~---~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~~------~~~~~i~i--t~Ga~ 82 (356)
T PRK08056 19 PDQLLDFSANINP--LG---MPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHHQ------VPASWILA--GNGET 82 (356)
T ss_pred hhhEEEeccccCC--CC---CCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHhC------cChhhEEE--CCCHH
Confidence 3467999998874 22 557788887765543 335765 579999999999973 67899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+++.++ +..+ .+|+ |++++|+|..|...++..|++++.+|+ +++ ++.+| +.+++.+ .+++++++++|||
T Consensus 83 ~~l~~~---~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~-~~~~~~~---~~~~k~v~l~~p~ 152 (356)
T PRK08056 83 ESIFAV---VSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSL-READGWQLT-DAILEAL---TPDLDCLFLCTPN 152 (356)
T ss_pred HHHHHH---HHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEec-ccccCCCcc-HHHHHhc---cCCCCEEEEeCCc
Confidence 999986 3334 3475 788899999999999999999999998 433 33344 2344444 4678899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|++++++||+||+|.+|.+++ ....+ . ....+++|+++||||+||+||+|+||+++
T Consensus 153 NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~--~-~~~~~~~i~~~S~SK~~~~~G~RiG~~v~- 226 (356)
T PRK08056 153 NPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE--TGFIP--Q-LADNPHLWVLRSLTKFYAIPGLRLGYLVN- 226 (356)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc--hHHHH--H-hccCCCEEEEEechhhccCcchhheeeec-
Confidence 999999999999999999999999999999999998754 12212 2 23357999999999999999999999998
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
++ +.+++++.+.. ...+++.++|.++..+++++.
T Consensus 227 -~~----~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~--------------------------------------- 260 (356)
T PRK08056 227 -SD----DAAVARMRRQQ--MPWSINAFAALAGEVILQDRA--------------------------------------- 260 (356)
T ss_pred -CC----HHHHHHHHHhC--CCCchhHHHHHHHHHHhCCHH---------------------------------------
Confidence 64 36777777543 345677888888887776421
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
| ++++++++.++|+.+.+.|+++ +| +.+. +.+|+|.|..++.
T Consensus 261 -------~---~~~~~~~~~~~r~~l~~~L~~~--~~-~~~~-~~~~~~~~~~~~~ 302 (356)
T PRK08056 261 -------Y---QQATWQWLAEEGARFYQALCAL--PL-LTVW-PGRANYLFLRCER 302 (356)
T ss_pred -------H---HHHHHHHHHHHHHHHHHHHhcC--CC-cEEc-CCCCcEEEEEcCC
Confidence 2 3445566678888888888764 23 4333 4568899987753
No 92
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-34 Score=303.02 Aligned_cols=281 Identities=13% Similarity=0.073 Sum_probs=219.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
.++.++|+.|+++. + +++.+.+++.+.+.......|++ .|.++||+++|++++. . ..++|++ |+|++
T Consensus 25 ~~~~i~l~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~----~-~~~~I~~--t~G~~ 91 (356)
T PRK04870 25 ATGMVKLDAMENPY--R---LPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGV----P-AGADVLL--GNGSD 91 (356)
T ss_pred CCCceeCcCCCCCC--C---CCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCc----C-CCCcEEE--cCCHH
Confidence 35789999998742 2 56788888887665433567876 6889999999999852 1 2258999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++++||+|++++|+|..|...++..|++++.+|+ ++ ++++|++.+++.+. ..++++++++||||
T Consensus 92 ~~i~~~---~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~-~~-~~~~d~~~l~~~~~--~~~~~~v~l~~p~N 164 (356)
T PRK04870 92 ELIQLL---ALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPL-TA-DFTLDLPAMLAAIA--EHRPALVFLAYPNN 164 (356)
T ss_pred HHHHHH---HHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecC-CC-CCCCCHHHHHHHhh--cCCCCEEEEcCCCC
Confidence 999985 4456677999999999999999999999999999999 53 47899999988874 24678888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++| ++++|+||+|.+|.+.. .. .. .+..+++|+++|||| +++||+|+||+++
T Consensus 165 PtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~----~~--~~-~~~~~~vi~~~S~SK-~~~~GlRiG~~i~-- 231 (356)
T PRK04870 165 PTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS----WL--PR-LARFPNLLVMRTVSK-LGLAGLRLGYLAG-- 231 (356)
T ss_pred CCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc----hH--HH-HhhCCCEEEEecchh-hhhHHHhhhhhhC--
Confidence 999999999999999998 67899999999987532 11 12 244578999999999 8999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
+ +++++++.+.+ ...+++.++|.++..++++..
T Consensus 232 ~-----~~~i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~---------------------------------------- 264 (356)
T PRK04870 232 H-----PAWIAELDKVR--PPYNVNVLTQATALFALEHVD---------------------------------------- 264 (356)
T ss_pred C-----HHHHHHHHHcc--CCCcCCHHHHHHHHHHHhCHH----------------------------------------
Confidence 7 57889888765 234678888888877776421
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.+++.++++.++|+.+.+.|+++ || +.. .+.+|.|.|..++
T Consensus 265 ---------~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~-~~~~~~~~~~~~~ 305 (356)
T PRK04870 265 ---------VLDAQAAQLRAERTRLAAALAAL--PG-VTV-FPSAANFILVRVP 305 (356)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHhC--CC-cEE-CCCCCeEEEEECC
Confidence 12334445567888888888774 33 433 4567788898876
No 93
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-34 Score=299.94 Aligned_cols=276 Identities=18% Similarity=0.201 Sum_probs=224.1
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
+.++|+.++.. .+ +++.+.+++.+.... ...|+++ ...+|+++++++++. +++++|++ ++|+.+.
T Consensus 23 ~~i~LssNenP--~g---p~~~~~~~~~~~~~~--~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~--gnGsde~ 87 (356)
T COG0079 23 GIIKLSSNENP--YG---PPPKVIEAIRAALDK--LNRYPDP-DYRELRAALAEYYGV-----VDPENVLV--GNGSDEL 87 (356)
T ss_pred cceeecCCCCC--CC---CCHHHHHHHHHHHHh--hccCCCC-cHHHHHHHHHHHhCC-----CCcceEEE--cCChHHH
Confidence 57888877753 23 447777777666542 5667666 789999999999964 67899999 9999999
Q ss_pred HHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q psy14428 244 LRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPT 323 (583)
Q Consensus 244 l~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 323 (583)
|+++ .+.++.+||+|+++.|+|..|...++..|++++.+|. ++ +.+|++.+.+.+ .++++++++|||||||
T Consensus 88 i~~l---~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~-~~--~~~d~~~~~~~~---~~~~~lv~i~nPNNPT 158 (356)
T COG0079 88 IELL---VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPL-KE--FRLDLDAILAAI---RDKTKLVFLCNPNNPT 158 (356)
T ss_pred HHHH---HHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecc-cc--cccCHHHHHHhh---hcCCCEEEEeCCCCCC
Confidence 9994 5667888999999999999999999999999999999 44 788999998887 4478999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCC
Q psy14428 324 GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPT 403 (583)
Q Consensus 324 G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~ 403 (583)
|..++.++++++++.+.+ +.+||+||+|.+|... +...+....+|+++++||||.||++|+|+||+++ +
T Consensus 159 G~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~-------~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia--~- 227 (356)
T COG0079 159 GTLLPREELRALLEALPE-GGLVVIDEAYIEFSPE-------SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA--N- 227 (356)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc-------hhhhhccCCCCEEEEEecHHhhhcchhceeeccC--C-
Confidence 999999999999999988 9999999999999852 1222223567899999999999999999999888 6
Q ss_pred chhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCCh-hhhhhhhhHHHHHHHHHHHHhhc-cC-CCccchhhHHHHhcC
Q psy14428 404 SDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDP-KLKAQCDETERIMSQLKILIRGF-YS-NPPIHGARIVTEILS 480 (583)
Q Consensus 404 ~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~l~~~~r~~-~~-~~p~~g~~i~~~~l~ 480 (583)
+++++.|.++.. .+++|.++|.++..++++. .+++.+..+....+++...++.. +. +.|+.++|++++...
T Consensus 228 ----~~~i~~l~~vr~--p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~~~ 301 (356)
T COG0079 228 ----PELIAALNKVRP--PFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRVPD 301 (356)
T ss_pred ----HHHHHHHHHhcC--CCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEECCC
Confidence 689999998754 3478999999999999976 34444444555555555444432 23 789999999988865
No 94
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-34 Score=302.09 Aligned_cols=257 Identities=15% Similarity=0.165 Sum_probs=201.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC-CEEEEcCCCChhhHHHHhh
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV-KTVYFPTPTWNGHVRFCTD 277 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~ 277 (583)
...|+++. .++||++||++++ +++++|++ |+|+++++.++ +..++.+| |.|++++|+|..|...++.
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~l~~~---~~~~~~~g~~~vlv~~p~y~~~~~~~~~ 120 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALYG------CAPEQLLI--GRGSDEAIDLL---VRALCVPGRDAVLVTPPVFGMYAVCARL 120 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHhC------cChHHEEE--eCCHHHHHHHH---HHHhcCCCCCeEEEcCCChHHHHHHHHH
Confidence 45687654 6999999999983 67899999 99999999985 44566667 8999999999999999999
Q ss_pred cCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCC
Q psy14428 278 SRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLT 356 (583)
Q Consensus 278 ~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~ 356 (583)
.|++++.+|+.++ +++.+|++.+++.+. .+++++++++|||||||.+++.+++++|+++|+ ++++||+||+|.+|.
T Consensus 121 ~g~~~~~v~~~~~~~~~~~d~~~l~~~~~--~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~ 197 (364)
T PRK04781 121 QNAPLVEVPLVDGADGFHADVPAIVAAAL--ASNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFS 197 (364)
T ss_pred cCCEEEEEecCCCccCCCcCHHHHHHHHh--ccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhc
Confidence 9999999998322 234467877765542 457889999999999999999999999999985 478999999999998
Q ss_pred CCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHH
Q psy14428 357 SGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEI 436 (583)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~ 436 (583)
++. +...+.+..++||+++||||+||+||+|+||+++ | +++++.+.+.+. ..+.+.+.|.++..+
T Consensus 198 ~~~------~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~--~-----~~l~~~l~~~~~--~~~~~~~~~~~a~~~ 262 (364)
T PRK04781 198 DVP------SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIA--N-----AELIAVLRRCQA--PYPVPTPCAALAEQA 262 (364)
T ss_pred CCc------chHHHHhhCCCEEEEecChhhcccccceeeeeeC--C-----HHHHHHHHhccC--CCCCCHHHHHHHHHH
Confidence 642 1222235568999999999999999999999999 7 689999988764 357889999988888
Q ss_pred hCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14428 437 LSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK 516 (583)
Q Consensus 437 l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~p 516 (583)
++++.+.. ..+.++.+.++|+.+.+.|+++ |
T Consensus 263 l~~~~~~~-----------------------------------------------~~~~~~~~~~~r~~l~~~L~~~--~ 293 (364)
T PRK04781 263 LSAPALAV-----------------------------------------------TARRVAEVRAERERLHAALAQL--P 293 (364)
T ss_pred HhcccHHH-----------------------------------------------HHHHHHHHHHHHHHHHHHHHhC--C
Confidence 87642211 1112224567888889999775 3
Q ss_pred CCcccccccccceeecCCC
Q psy14428 517 KNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 517 g~~~~~~~~~g~f~~~~l~ 535 (583)
| +....+.+|.|.|..++
T Consensus 294 ~-~~~~~p~~g~f~~~~~~ 311 (364)
T PRK04781 294 G-VRRVYPSQGNFLLVRFD 311 (364)
T ss_pred C-CCeECCCCCcEEEEEcC
Confidence 3 33346788999998875
No 95
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-34 Score=300.18 Aligned_cols=269 Identities=17% Similarity=0.146 Sum_probs=204.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.+.++|+.+.+.. + +++.+.+++.+.........|+ ..|.++||+++|+|++ +++++|++ |+|+++
T Consensus 18 ~~~i~l~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~~------~~~~~I~~--t~G~~~ 83 (337)
T PRK03967 18 NYRIWLDKNENPF--D---LPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFYG------LDAENIAV--GNGSDE 83 (337)
T ss_pred CceEEecCCCCCC--C---CCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHhC------cCcceEEE--cCCHHH
Confidence 3568899888642 1 4467777776655432245675 5799999999999995 68899999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..+ +||+|++++|+|+.|...++..|++++.+++ ++ ++++|++.+++.+ +++++++++|||||
T Consensus 84 ~l~~~---~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~----~~~~~v~~~~P~NP 152 (337)
T PRK03967 84 LISYL---VKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPL-KE-DFTIDGERIAEKA----KNASAVFICSPNNP 152 (337)
T ss_pred HHHHH---HHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeec-CC-CCCcCHHHHHHhc----cCCCEEEEeCCCCC
Confidence 99875 3334 4999999999999999999999999999998 44 3789998887653 45678888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.+++.+++ +++++||+||+|.+|... ... .+.+..+++|+++||||+||+||+|+||+++ +
T Consensus 153 tG~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~----~~~---~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~--~ 219 (337)
T PRK03967 153 TGNLQPEEEILKVL----ETGKPVVLDEAYAEFSGK----SLI---GLIDEYPNLILLRTFSKAFGLAGIRAGYAIA--N 219 (337)
T ss_pred CCCCCCHHHHHHHH----hcCCEEEEECchhhhccc----chH---HHHhhCCCEEEEecchHhhcchhhhheeeec--C
Confidence 99999998877665 469999999999998632 222 2234457899999999999999999999999 7
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccC-CCccchhhHHHHh
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYS-NPPIHGARIVTEI 478 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~-~~p~~g~~i~~~~ 478 (583)
+++++++.+.... .+++.++|.++..++++..+ +.+..+...+.+..+.+.+-. ..|++++|+|.++
T Consensus 220 -----~~~i~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~ 287 (337)
T PRK03967 220 -----EEIIDALYRIKPP--FSLNILTMKIVRLALDHYDL--IEERIDYIIKERERVRRELGEYAYPSDANFLLLKL 287 (337)
T ss_pred -----HHHHHHHHhhcCC--CCCCHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHhccCcCCCCCcEEEEhH
Confidence 5899999887643 47789999999999986432 222233333333333322222 4678899998754
No 96
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=9.1e-34 Score=296.58 Aligned_cols=276 Identities=14% Similarity=0.099 Sum_probs=213.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
..++.+||+.+++.. .+++.+.+++.+...+ ..+|++..|.++||+++|++++ +++++|++ |+|+
T Consensus 20 ~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~------~~~~~I~i--t~Ga 84 (349)
T PRK07908 20 AGPGLLDFAVNVRHD-----TPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARHG------RTPDEVLL--LAGA 84 (349)
T ss_pred CCCCeEEecCCCCCC-----CCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHhC------cChhhEEE--CCCH
Confidence 467889999988742 2567788888776643 4679989999999999999973 57899999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +. + .+ +.++++.|+|..+...++..|++++.+|+ +++ +++|++.+ .++++++++||||
T Consensus 85 ~~al~~~---~~-l-~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~-~~~-~~~d~~~l-------~~~~~~i~l~np~ 149 (349)
T PRK07908 85 AEGFALL---AR-L-RP-RRAAVVHPSFTEPEAALRAAGIPVHRVVL-DPP-FRLDPAAV-------PDDADLVVIGNPT 149 (349)
T ss_pred HHHHHHH---Hh-c-CC-CeEEEeCCCChHHHHHHHHcCCEEEeecc-Ccc-cCcChhHh-------ccCCCEEEEcCCC
Confidence 9999985 33 3 44 46778999999999999999999999999 543 67887643 3467799999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++.++ |+ ++.++|+||+|.++..+. ..++.+. ..+++|+++||||+|++||+|+||+++
T Consensus 150 NPTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~~~----~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~- 218 (349)
T PRK07908 150 NPTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVPGE----PESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALG- 218 (349)
T ss_pred CCCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhccCC----ccccccc--cCCCEEEEeecccccCCccceeeeeec-
Confidence 999999998876554 54 477888899999986432 2344332 346899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++.+.... .+.+.+.|.++..++++..
T Consensus 219 -~-----~~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~--------------------------------------- 251 (349)
T PRK07908 219 -A-----PDVLARLTRGRAH--WPVGTLQLEAIAACCAPRA--------------------------------------- 251 (349)
T ss_pred -C-----HHHHHHHHhcCCC--CCccHHHHHHHHHHhcccc---------------------------------------
Confidence 7 5788888875443 4566677776666655311
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 252 --------~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~p~~g~~~~~~~~~ 295 (349)
T PRK07908 252 --------VAEAAADAARLAADRAEMVAGLRAVG----ARVVDPAAAPFVLVRVPD 295 (349)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHHHhCC----cEeccCCCceEEEEECCc
Confidence 12345567777888999999998753 556677899999998874
No 97
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.8e-34 Score=296.42 Aligned_cols=246 Identities=12% Similarity=0.090 Sum_probs=186.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcC
Q psy14428 200 HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSR 279 (583)
Q Consensus 200 ~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G 279 (583)
..|+ ..-..+||+++|+|++ +++++|++ |+|+++++.++. ..+ .+| .|++++|+|+.|...++..|
T Consensus 35 ~~Yp-~~~~~~lr~~ia~~~~------~~~~~I~i--t~Gs~~~l~~~~---~~~-~~~-~vv~~~P~y~~y~~~~~~~G 100 (332)
T PRK06425 35 SIYP-EISYTDIEDQIKIYTQ------GLKIKVLI--GPGLTHFIYRLL---SYI-NVG-NIIIVEPNFNEYKGYAFTHG 100 (332)
T ss_pred ccCc-CcCHHHHHHHHHHHhC------CCcceEEE--CCCHHHHHHHHH---HHh-CCC-cEEEeCCChHHHHHHHHHcC
Confidence 4474 4458999999999986 46899999 999999999863 333 446 47777999999999999999
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.+|+ +. .++|.+.++ ..+++++++||||||||.+++.+++++|+++|++++++||+||+|.+|.+++
T Consensus 101 ~~v~~vp~-~~--~~~~~~~l~------~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~ 171 (332)
T PRK06425 101 IRISALPF-NL--INNNPEILN------NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR 171 (332)
T ss_pred CeEEEEeC-Cc--ccCcHHHHh------hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc
Confidence 99999998 44 345544332 1367788889999999999999999999999999999999999999998754
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
..+...+.+..++||+++||||+||+||+|+||+++ | +++++.+.+.... .+.+.+.+ .++..
T Consensus 172 ----~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~--~-----~~li~~l~~~~~~--~~~~~~~~----~~l~~ 234 (332)
T PRK06425 172 ----AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIAT--D-----DYNMKISRKITEP--WSVCDPAI----DFIRS 234 (332)
T ss_pred ----chhHHHHhccCCCEEEEeecHHhcCCchhhheeeec--C-----HHHHHHHHHcCCC--CccCHHHH----HHHHH
Confidence 123444445557999999999999999999999999 7 5788888864322 12222211 11111
Q ss_pred hhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy14428 440 PKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNW 519 (583)
Q Consensus 440 ~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~ 519 (583)
..+..+++++++.+.++|+.+.+.|++.+ +
T Consensus 235 ----------------------------------------------~~~~~~~~~~~~~~~~~r~~l~~~L~~~g----~ 264 (332)
T PRK06425 235 ----------------------------------------------IDLDYVAKHSLDIMENERSYLINNLEAMG----F 264 (332)
T ss_pred ----------------------------------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHCC----C
Confidence 01123356677888999999999998864 4
Q ss_pred ccccccccceeecCCC
Q psy14428 520 DHITNQKGMFCYTGLS 535 (583)
Q Consensus 520 ~~~~~~~g~f~~~~l~ 535 (583)
....+.+|.|.|..++
T Consensus 265 ~~~~~~~g~f~~~~~~ 280 (332)
T PRK06425 265 RAAGDPSANFITFMIP 280 (332)
T ss_pred EECCCCCceEEEEEcC
Confidence 4444456788888775
No 98
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-33 Score=297.65 Aligned_cols=244 Identities=16% Similarity=0.177 Sum_probs=199.4
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..+.|+|+.+... ..+++.+.+++.+.........|++..|.++||+++|++++ +++++|++ |+|++
T Consensus 27 ~~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~------~~~~~v~~--~~g~t 93 (380)
T PRK06225 27 DKEMIWMGQNTNH-----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDDEALI--TAGAT 93 (380)
T ss_pred cCCeEEccCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcC------CCCCcEEE--eCCHH
Confidence 4578999987763 22567888888888765445679999999999999999974 56789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+++.++ .++.+|++.+++.+ .+++++++++|||
T Consensus 94 ~al~~~---~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~---~~~~~~v~l~~p~ 167 (380)
T PRK06225 94 ESLYLV---MRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENM---DENTRLIYLIDPL 167 (380)
T ss_pred HHHHHH---HHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhc---CCCceEEEEeCCC
Confidence 999985 4456677999999999999999999999999999997322 24678999998877 4568888889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|+++|++||+||+|.+|..+. . +...+ ..++++++.||||.+|++|+|+||+++
T Consensus 168 NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~--~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~- 239 (380)
T PRK06225 168 NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH---T--LAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVA- 239 (380)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC---C--chhhc--CCCCEEEEeechhhcCCccceeEEEec-
Confidence 999999999999999999999999999999999886542 1 12222 246899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++++..... ...+++.++|.++...++.
T Consensus 240 -~-----~~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~ 271 (380)
T PRK06225 240 -T-----PDLIEVVKSIVI-NDLGTNVIAQEAAIAGLKV 271 (380)
T ss_pred -C-----HHHHHHHHHHHh-cccCCCHHHHHHHHHHHhc
Confidence 7 578888887643 3466788888888777653
No 99
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=4.9e-34 Score=299.01 Aligned_cols=280 Identities=17% Similarity=0.179 Sum_probs=215.9
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.|+|+.+.+.. + +++.+.+++.+.... ...| +..|.++||+++|++++ +++++|++ |+|+++
T Consensus 22 ~~~i~l~~~~~~~--~---~~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~--~~G~~~ 85 (352)
T PRK03321 22 PGAIKLSSNETPF--G---PLPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHLG------VPPEHVAV--GCGSVA 85 (352)
T ss_pred ccceeccCCCCCC--C---CCHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHhC------cCHHHEEE--CCCHHH
Confidence 3578999998752 2 456788887776543 4457 46799999999999985 67889999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..++.+||+|+++.|+|..|...++..|++++.+|+ +++ +++|++.+++.+ .+++++++++|||||
T Consensus 86 ~l~~~---~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~-~~~-~~~~~~~l~~~~---~~~~~~v~l~~p~NP 157 (352)
T PRK03321 86 LCQQL---VQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPL-TPD-HTHDLDAMAAAI---TDRTRLIFVCNPNNP 157 (352)
T ss_pred HHHHH---HHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccC-CCC-CCCCHHHHHHhh---ccCCCEEEEeCCCCC
Confidence 98875 4456677999999999999999999999999999998 543 688999998877 456788888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.+++.++++.+ +++++||+||+|.+|.+++. ...++..+ +..+++|+++||||.||+||+|+||+++ |
T Consensus 158 tG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~--~ 231 (352)
T PRK03321 158 TGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDD--VPDGLELV-RDHPNVVVLRTFSKAYGLAGLRVGYAVG--H 231 (352)
T ss_pred cCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcC--CCcHHHHH-hhCCCEEEEecchHHhhhHHHhhhhhcC--C
Confidence 99999999999998876 57999999999999998752 22334333 4557999999999999999999999999 7
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC-hhhhhhhhhHHHHHHHHHHHHhh-ccCCCccchhhHHHHhc
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD-PKLKAQCDETERIMSQLKILIRG-FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~~r~-~~~~~p~~g~~i~~~~l 479 (583)
+++++.+.+. ....++|.++|.++...+.+ +.+.+++++..+....+.+.++. .+..+|.+|.|+|..+.
T Consensus 232 -----~~~~~~~~~~--~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~g~~i~i~l~ 303 (352)
T PRK03321 232 -----PEVIAALRKV--AVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAGWTVPPSQANFVWLPLG 303 (352)
T ss_pred -----HHHHHHHHHh--cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCCCEEEEeCC
Confidence 5899998875 34568899999988888864 33333333322222222222222 34556678899888763
No 100
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-34 Score=296.70 Aligned_cols=247 Identities=16% Similarity=0.167 Sum_probs=193.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC-CEEEEcCCCChhhHHHHhh
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV-KTVYFPTPTWNGHVRFCTD 277 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~ 277 (583)
...|++. ...+|+++++++++ +++++|++ |+|+++++.++ +..++.+| |+|++++|+|..|...++.
T Consensus 51 ~~~Yp~~-~~~~l~~~~a~~~g------~~~~~I~~--~~Gs~e~i~~~---~~~~~~~g~~~vli~~P~y~~y~~~~~~ 118 (351)
T PRK01688 51 LNRYPEC-QPKAVIENYAAYAG------VKPEQVLV--SRGADEGIELL---IRAFCEPGKDAILYCPPTYGMYSVSAET 118 (351)
T ss_pred cccCCCC-ChHHHHHHHHHHhC------CCHHHEEE--cCCHHHHHHHH---HHHhcCCCCCEEEEcCCCHHHHHHHHHH
Confidence 4457544 45899999999874 67899999 99999999996 44456666 9999999999999999999
Q ss_pred cCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC
Q psy14428 278 SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS 357 (583)
Q Consensus 278 ~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~ 357 (583)
.|++++.+|+ ++ ++++|++.+++.+ ++++++++||||||||.+++.+++++|++.|++ +.+||+||+|.+|..
T Consensus 119 ~G~~~~~v~~-~~-~~~~d~~~l~~~~----~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~ 191 (351)
T PRK01688 119 IGVEIRTVPT-LD-NWQLDLPAIADNL----DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCP 191 (351)
T ss_pred cCCEEEEeec-CC-CCCCCHHHHHHhc----cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCC
Confidence 9999999998 44 4789999998765 367899999999999999999999999999976 678999999999974
Q ss_pred CCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 358 GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
.. +...+....+++|+++||||.||+||+|+||+++ + +++++.+.+... .++++.+.|.++..++
T Consensus 192 ~~------s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~--~-----~~~i~~l~~~~~--~~~v~~~~~~~a~~~L 256 (351)
T PRK01688 192 QA------SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLA--N-----EEVINLLLKVIA--PYPLSTPVADIAAQAL 256 (351)
T ss_pred CC------ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhC--C-----HHHHHHHHhccC--CCCCCHHHHHHHHHHH
Confidence 32 2333345568999999999999999999999998 6 588998887643 3567888899998998
Q ss_pred CCh---hhhhhhhhHHHHHHHHHHHHhh--cc-CCCccchhhHHHHhc
Q psy14428 438 SDP---KLKAQCDETERIMSQLKILIRG--FY-SNPPIHGARIVTEIL 479 (583)
Q Consensus 438 ~~~---~~~~~~~~~~~~~~~l~~~~r~--~~-~~~p~~g~~i~~~~l 479 (583)
++. .++++.+..+...+.+.+.++. .+ ...|++++|+|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~ 304 (351)
T PRK01688 257 SPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT 304 (351)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC
Confidence 863 3333333333323333333332 23 256889999998764
No 101
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.3e-32 Score=289.92 Aligned_cols=240 Identities=18% Similarity=0.187 Sum_probs=195.2
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..+.++|+.+++. .+ +++.+.+++.+.... ...|++..+ .+||+++|++++ +++++|++ |+|++
T Consensus 31 ~~~~i~l~~~~~~--~~---~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~--t~G~~ 94 (367)
T PRK02731 31 IADIIKLASNENP--LG---PSPKAIEAIRAAADE--LHRYPDGSG-FELKAALAEKFG------VDPERIIL--GNGSD 94 (367)
T ss_pred CCceEEecCCCCC--CC---CCHHHHHHHHHHHHh--hcCCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHH
Confidence 4568999999864 23 346788877776543 467876654 799999999983 56889999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..++++||+|++++|+|..+...++..|++++.+|+ + ++++|++.+++.+ .+++++++++||||
T Consensus 95 ~~l~~~---~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~l~~~~---~~~~~~v~l~~p~n 165 (367)
T PRK02731 95 EILELL---ARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-K--DYGHDLDAMLAAV---TPRTRLVFIANPNN 165 (367)
T ss_pred HHHHHH---HHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-c--CCCCCHHHHHHHh---CCCCcEEEEeCCCC
Confidence 999885 3445667999999999999999989999999999988 3 3788999998887 45778888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|++.|+ ++++||+||+|.++.+++. ...++.. .+..+++|+++||||.||++|+|+||+++
T Consensus 166 ptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~RiG~l~~-- 239 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGLEL-VAKFPNVVVTRTFSKAYGLAGLRVGYGIA-- 239 (367)
T ss_pred CCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHHHH-HhhcCCEEEEeeehHhhcCcccceeeeeC--
Confidence 9999999999999999875 6999999999999988642 2233433 34567899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++++.+... ..+.+.++|.++..++++
T Consensus 240 ~-----~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~ 270 (367)
T PRK02731 240 P-----PEIIDALNRVRQ--PFNVNSLALAAAVAALDD 270 (367)
T ss_pred C-----HHHHHHHHHccC--CCCCCHHHHHHHHHHhCC
Confidence 7 578888887654 246678999999888865
No 102
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=9.1e-33 Score=286.55 Aligned_cols=191 Identities=16% Similarity=0.133 Sum_probs=158.2
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCe
Q psy14428 202 YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLN 281 (583)
Q Consensus 202 Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 281 (583)
|+. +..+||++||++++ +++|++ |+|+++++.++ + ...+||+|++++|+|+.|...++..|++
T Consensus 47 yp~--~~~~Lr~~ia~~~~--------~~~I~i--t~Gs~~al~~~--~---~~~~gd~v~v~~P~y~~~~~~~~~~g~~ 109 (330)
T PRK05664 47 LPE--TDDGLEAAARAYYG--------APQLLP--VAGSQAAIQAL--P---RLRAPGRVGVLSPCYAEHAHAWRRAGHQ 109 (330)
T ss_pred CCC--ChHHHHHHHHHHhC--------CCCEEE--CcCHHHHHHHH--H---HccCCCEEEEcCCChHHHHHHHHHcCCe
Confidence 654 34899999999985 379999 99999999985 2 2346999999999999999999999999
Q ss_pred EEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCC
Q psy14428 282 VGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFD 361 (583)
Q Consensus 282 ~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~ 361 (583)
++.+|+ + .+++.+ +++++++++|||||||.+++.+++++|+++|++++++||+||+|.++...
T Consensus 110 ~~~v~~-~---------~~~~~~----~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~--- 172 (330)
T PRK05664 110 VRELDE-A---------EVEAAL----DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ--- 172 (330)
T ss_pred EEEech-h---------hHhhhh----cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc---
Confidence 999987 2 122333 24567888999999999999999999999999999999999999887521
Q ss_pred CchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 362 KDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+++.++. ..++||+++||||+||+||+|+||+++ | +++++.+.+... ..+.+.+.|.++..++++
T Consensus 173 ---~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~--~-----~~l~~~~~~~~~--~~~~~~~~~~~~~~~L~~ 237 (330)
T PRK05664 173 ---HSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVLA--E-----PALLRALAELLG--PWTVSGPTRWLAQAALAD 237 (330)
T ss_pred ---ccccccc-cCCCEEEEeeccccccCCCcceEEEEe--C-----HHHHHHHHHhcC--CCCCCHHHHHHHHHHHhC
Confidence 2344443 457899999999999999999999999 7 589999987644 346788999998888876
No 103
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-33 Score=293.49 Aligned_cols=268 Identities=14% Similarity=0.122 Sum_probs=200.0
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
...++|+.+++. .+ +++.+ ... ....|++. +.++||+++|++++ +++++|++ |+|+++
T Consensus 31 ~~~~~l~~ne~~--~~---~~~~~-----~~~---~~~~Yp~~-~~~~Lr~aia~~~~------~~~~~I~i--t~Gs~~ 88 (354)
T PRK04635 31 RGDIWINANESP--FN---NEYKL-----DLA---RLNRYPEC-QPPELINAYSAYAG------VAPEQILT--SRGADE 88 (354)
T ss_pred CCcEEeeCCCCC--CC---CChhh-----hhH---HhccCCCC-CHHHHHHHHHHHhC------cCHHHEEE--eCCHHH
Confidence 345888888874 22 22222 111 14558765 58999999999873 68999999 999999
Q ss_pred HHHHHHHHHHHhCCCC-CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 243 SLRVGTAFLERFYPGV-KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 243 al~l~~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
++.++ +..++.+| |+|++++|+|+.|...++..|++++.+|+ ++ ++++|++.++ .+ ++++++++|||||
T Consensus 89 ~i~~~---~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~-~~-~~~~~~~~l~-~~----~~~~li~i~nP~N 158 (354)
T PRK04635 89 AIELL---IRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPL-TA-DYQLPLDYIE-QL----DGAKLVFICNPNN 158 (354)
T ss_pred HHHHH---HHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEec-CC-CCCCCHHHHH-hc----cCCCEEEEeCCCC
Confidence 99995 44566667 99999999999999999999999999999 54 3678887775 22 4788999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|++ ++||+||+|.+|.... +...+....+++|+++||||.||+||+|+||+++
T Consensus 159 PTG~~~~~~~l~~l~~~~~~--~~vivDeay~~~~~~~------s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~-- 228 (354)
T PRK04635 159 PTGTVIDRADIEQLIEMTPD--AIVVVDEAYIEFCPEY------SVADLLASYPNLVVLRTLSKAFALAGARCGFTLA-- 228 (354)
T ss_pred CCCccCCHHHHHHHHHhCCC--cEEEEeCchHhhccCc------chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhC--
Confidence 99999999999999998764 9999999999987432 2333334567999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhh---hhhhhHHHHHHHHHHHHhh--ccCCCccchhhHHH
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLK---AQCDETERIMSQLKILIRG--FYSNPPIHGARIVT 476 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~l~~~~r~--~~~~~p~~g~~i~~ 476 (583)
+ +++++.+.+... ..+.+.+.|.++..++++...+ ++.+..+...+.+.+.++. .+...|++|+|+|+
T Consensus 229 ~-----~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~ 301 (354)
T PRK04635 229 N-----EELIEILMRVIA--PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVLA 301 (354)
T ss_pred C-----HHHHHHHHhhcC--CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEEE
Confidence 6 578888876433 4577888999999998764332 2222222222223333332 24455667889987
Q ss_pred Hhc
Q psy14428 477 EIL 479 (583)
Q Consensus 477 ~~l 479 (583)
++.
T Consensus 302 ~~~ 304 (354)
T PRK04635 302 KFD 304 (354)
T ss_pred ECC
Confidence 664
No 104
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=4.5e-32 Score=283.50 Aligned_cols=282 Identities=19% Similarity=0.200 Sum_probs=219.8
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..+.|+|++|.++. + +++.+.+++.+.... ...|+++.| ++||+++|++++ +++++|++ |+|++
T Consensus 18 ~~~~i~l~~~~~~~--~---~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~--~~G~~ 81 (346)
T TIGR01141 18 GKEVIKLNSNENPF--G---PPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYYG------VDPEQILL--GNGSD 81 (346)
T ss_pred CCceEEccCCCCCC--C---CCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHhC------cChHHEEE--cCCHH
Confidence 35789999999842 2 456778877766532 467887776 999999999986 56789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++..+ +..+..+||+|++++|+|+.+...++..|++++.+++ +++ +.+|++.+++.+ .++++++++++|||
T Consensus 82 ~~l~~~---~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~-~~~-~~~d~~~l~~~~---~~~~~~v~l~~p~N 153 (346)
T TIGR01141 82 EIIELL---IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPL-DED-GQLDLEDILVAI---DDKPKLVFLCSPNN 153 (346)
T ss_pred HHHHHH---HHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecc-CCC-CCCCHHHHHHhc---CCCCCEEEEeCCCC
Confidence 999875 3445567999999999999999999999999999998 443 568999998865 56788999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.++++++++.|+ +++++|+||+|.++..++ ...+ .....+++|+++||||.+|++|+|+||+++
T Consensus 154 ptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~~~~---~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~-- 224 (346)
T TIGR01141 154 PTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---STLP---LLAEYPNLIVLRTLSKAFGLAGLRIGYAIA-- 224 (346)
T ss_pred CCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---cHHH---HHhhCCCEEEEehhhHhhhchhhhceeeec--
Confidence 9999999999999999987 799999999999887542 1111 123346899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
+ ++++++++.... ..+.+.++|.++..++++..
T Consensus 225 ~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~---------------------------------------- 257 (346)
T TIGR01141 225 N-----AEIIDALNKVRA--PFNLSRLAQAAAIAALRDDD---------------------------------------- 257 (346)
T ss_pred C-----HHHHHHHHhccC--CCCCCHHHHHHHHHHhCCHH----------------------------------------
Confidence 6 578888876543 35678888988888876521
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+++++++++.++|+.+.+.|++. || +. ..+.+|.|.|..++.
T Consensus 258 ---------~~~~~~~~~~~~~~~l~~~L~~~--~g-~~-~~~~~g~~~~~~~~~ 299 (346)
T TIGR01141 258 ---------FIEKTVEEINAERERLYDGLKKL--PG-LE-VYPSDANFVLIRFPR 299 (346)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHhc--CC-CE-ECCCcCCEEEEecCC
Confidence 13344555667777888888765 33 44 335567888877753
No 105
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=2.3e-32 Score=281.28 Aligned_cols=253 Identities=14% Similarity=0.085 Sum_probs=184.9
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.+.++|+.++.. .+++.+.+++.+.... ...|+. ...||+++++++. ++|++ |+|+++
T Consensus 8 ~~~i~l~~~~np------~~p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~v--t~G~~~ 65 (311)
T PRK08354 8 EGLIDFSASVNP------YPPEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVI--TAGITE 65 (311)
T ss_pred cceeEecCCCCC------CCCHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEE--CCCHHH
Confidence 457899988642 2346777777665543 345753 4779999999885 47999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..+. +||+|++++|+|+.|...++..|++++.++. |++.+++.++ ++++++++|||||
T Consensus 66 al~~~---~~~~~-~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~~~~----~~~~vi~~~P~NP 129 (311)
T PRK08354 66 ALYLI---GILAL-RDRKVIIPRHTYGEYERVARFFAARIIKGPN--------DPEKLEELVE----RNSVVFFCNPNNP 129 (311)
T ss_pred HHHHH---HHhhC-CCCeEEEeCCCcHHHHHHHHHcCCEEeecCC--------CHHHHHHhhc----CCCEEEEecCCCC
Confidence 99975 33344 5999999999999999999999999976543 6777776652 4567888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.+++++|+++|++++++||+||+|.+|.+++. .. ..+++|+++||||+|++||+|+||+++ .
T Consensus 130 TG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~---~~-------~~~~vi~~~S~SK~~~l~GlRiG~~v~--~ 197 (311)
T PRK08354 130 DGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE---SP-------EGENIIKLRTFTKSYGLPGIRVGYVKG--F 197 (311)
T ss_pred CCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc---cc-------CCCcEEEEeccHhhcCCccceeeeeee--h
Confidence 99999999999999999999999999999999998741 11 157899999999999999999999998 3
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
++.+++... ....+.+.|.++..++++ .++...+..+...+.++.+ ...... ++.|+|+|+.+
T Consensus 198 --------~~~l~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l-~~~l~~-~~~~~~~~~~~ 260 (311)
T PRK08354 198 --------EEAFRSVRM--PWSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERF-EKALYV-KSDANFFIKDV 260 (311)
T ss_pred --------HHHHHHcCC--CccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHH-HHhcCC-CCCCcEEEEEC
Confidence 334444332 335566778888777774 3333222233333333333 222223 44566666543
No 106
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=6.1e-32 Score=281.13 Aligned_cols=222 Identities=15% Similarity=0.124 Sum_probs=171.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.+.++|+.++.. .++|. +.+.. .. ...|++.. .+||+++|++++- .++++|++ |+|+++
T Consensus 24 ~~~i~ls~Nenp--~~~~~--~~~~~---~~-----~~~Yp~~~--~~L~~~ia~~~~~-----~~~~~I~i--~~Gs~e 82 (339)
T PRK06959 24 DAWLDLSTGINP--HGYPV--PPVPA---DA-----WRRLPEDD--DGLAACAARYYGA-----PDAAHVLP--VAGSQA 82 (339)
T ss_pred hhhceeccCCCC--CCCCC--CCCCH---HH-----HHhCCCch--HHHHHHHHHHhCC-----CCcccEEE--CcCHHH
Confidence 356888888853 33331 11111 11 23476543 8999999999863 24689999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ .. +.++|| |++++|+|+.|...++..|++++.+++ +. +.+ ....+++++||||||
T Consensus 83 ~i~~l---~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~-~~-------~~~-------~~~~~~v~l~nPnNP 142 (339)
T PRK06959 83 AIRAL---PA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDE-AA-------DTL-------PAALTHLIVVNPNNP 142 (339)
T ss_pred HHHHH---HH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecc-cc-------hhc-------cccCCEEEEeCCCCC
Confidence 99864 33 345576 899999999999999999999999887 32 111 123457889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.+++++|++.|++++.+||+||+|.+|.+. +++..+. ..+++|+++||||.||+||+|+||+++ |
T Consensus 143 TG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~------~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~--~ 213 (339)
T PRK06959 143 TAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA------ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLA--A 213 (339)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc------ccchhcc-CCCCEEEEecChhhcCCcchheEEEec--C
Confidence 999999999999999999999999999999998743 1333333 347899999999999999999999999 7
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChh
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK 441 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~ 441 (583)
+++++++.+... ..++|.++|.++..+++++.
T Consensus 214 -----~~li~~l~~~~~--~~~vs~~~q~a~~~~L~~~~ 245 (339)
T PRK06959 214 -----PALLAALRDALG--AWTVSGPARHAVRAAFADAA 245 (339)
T ss_pred -----HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCcHH
Confidence 589999998754 34578999999999998743
No 107
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.3e-31 Score=281.53 Aligned_cols=272 Identities=18% Similarity=0.223 Sum_probs=203.8
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.+.++|+.+++.. + +++.+.+++.+.... ...|+++.+ ++||+++|++++ +++++|++ .|+|+++
T Consensus 34 ~~~i~l~~~~~~~--~---~~~~~~~~~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~-~~~Ga~~ 98 (361)
T PRK00950 34 ESIIKLGSNENPL--G---PSPKAVEAIEKELSK--IHRYPEPDA-PELREALSKYTG------VPVENIIV-GGDGMDE 98 (361)
T ss_pred cceEEccCCCCCC--C---CCHHHHHHHHHHHHh--hcCCCCCCH-HHHHHHHHHHhC------CCHHHEEE-eCCCHHH
Confidence 3779999988642 2 446677776655543 456876655 999999999984 56788877 1378888
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..++++||.|++++|+|+.+...++..|++++.++. +. ++++|++.+++.+ .++++++++++||||
T Consensus 99 ~i~~~---~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~-~~~~~~~~l~~~~---~~~~~~v~~~~p~np 170 (361)
T PRK00950 99 VIDTL---MRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR-EE-DFSLDVDSVLNAI---TEKTKVIFLCTPNNP 170 (361)
T ss_pred HHHHH---HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec-CC-CCCcCHHHHHHHh---ccCCCEEEEeCCCCC
Confidence 88874 4455677999999999999999999999999999986 43 4689999998877 456788888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.+++.+|+ ++++++||+||+|.+|. +. +..+ +.+..+++++++||||++|+||+|+||+++ |
T Consensus 171 tG~~~~~~~l~~l~---~~~~~~li~De~y~~~~-~~---~~~~---~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~--~ 238 (361)
T PRK00950 171 TGNLIPEEDIRKIL---ESTDALVFVDEAYVEFA-EY---DYTP---LALEYDNLIIGRTFSKVFGLAGLRIGYGFV--P 238 (361)
T ss_pred CCCCcCHHHHHHHH---HHCCcEEEEECchhhhC-cc---chHH---HHHhcCCEEEEEeehHhhcCchhhcchhcC--C
Confidence 99999999887664 56799999999999886 21 2222 234457899999999999999999999999 7
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChh-hhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK-LKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+++++.+.+.... .+.+.+.|.++..++++.. ++++.+..+.....+.+.++ +...|++|+|+|+.+
T Consensus 239 -----~~~~~~~~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~--~~~~~~~~~~i~~~~ 306 (361)
T PRK00950 239 -----EWLIDYYMRAKTP--FSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP--FKVYPSEANFVLVDV 306 (361)
T ss_pred -----HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC--eeECCCcceEEEEEC
Confidence 5788888876543 4578899999999988643 44433333322222222222 344577888999877
No 108
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=4.6e-31 Score=273.83 Aligned_cols=280 Identities=16% Similarity=0.183 Sum_probs=209.7
Q ss_pred hhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC
Q psy14428 149 PLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK 228 (583)
Q Consensus 149 ~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~ 228 (583)
++.++...+. .+.++.++|+.|.+. .+ ++..... . ....+|+++.| ++||++++++++ ++
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~~~~~--~~----~~~~~~~-~-----~~~~~y~~~~~-~~lr~~la~~~~------~~ 63 (330)
T TIGR01140 4 NLRRAAARYG-IPPEDWLDFSTGINP--LG----PPVPPIP-A-----SAWARYPDPEY-DELRAAAAAYYG------LP 63 (330)
T ss_pred cHHHHHHHcC-CChhheeEccccCCC--CC----CChhhcc-h-----HHHhhCCCccH-HHHHHHHHHHhC------CC
Confidence 3444444432 246678999999853 12 1211111 1 12466887776 999999999984 56
Q ss_pred CCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 229 DNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 229 ~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
+++|++ |+|+++++.++. ..+ .+| .|++++|+|..+...++..|++++.++ |++.+++.+
T Consensus 64 ~~~i~~--t~G~~~~i~~~~---~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~---- 123 (330)
T TIGR01140 64 AASVLP--VNGAQEAIYLLP---RLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAAL---- 123 (330)
T ss_pred hhhEEE--CCCHHHHHHHHH---HHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhc----
Confidence 899999 999999999853 333 447 699999999999999999999988775 566776665
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 309 ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.. ++..+.+..+++|+++||||+||
T Consensus 124 ~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~------~~~~~~~~~~~~i~~~S~SK~~g 197 (330)
T TIGR01140 124 EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA------SLAPQAARFPGLVVLRSLTKFFG 197 (330)
T ss_pred ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc------chhhHhccCCCEEEEEecchhhc
Confidence 235688889999999999999999999999999999999999999998642 23333334578999999999999
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCc
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPP 468 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p 468 (583)
+||+|+||+++ + +++++++..... ..+++.++|.++..+++++.
T Consensus 198 ~~G~R~G~i~~--~-----~~~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~~--------------------------- 241 (330)
T TIGR01140 198 LAGLRLGFVVA--H-----PALLARLREALG--PWTVNGPARAAGRAALADTA--------------------------- 241 (330)
T ss_pred CchhhhhheeC--C-----HHHHHHHHhcCC--CCCchHHHHHHHHHHHhchH---------------------------
Confidence 99999999999 6 578888886543 34678889999988887532
Q ss_pred cchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 469 IHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 469 ~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
| .+.+++++..+|+.+.+.|++.+ ... ..+.+|+|.|..++.
T Consensus 242 -------------------~---~~~~~~~~~~~~~~l~~~L~~~~---~~~-~~~~~~~f~~~~~~~ 283 (330)
T TIGR01140 242 -------------------W---QAATRARLAAERARLAALLARLG---GLE-VVGGTALFLLVRTPD 283 (330)
T ss_pred -------------------H---HHHHHHHHHHHHHHHHHHHHhCC---Cce-ECCCCCeEEEEEcCC
Confidence 2 12234566778888888888754 122 245678999987754
No 109
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.4e-29 Score=250.01 Aligned_cols=143 Identities=29% Similarity=0.486 Sum_probs=130.8
Q ss_pred eEEecCCCCcCchhhhhhcCC-----CceeeeeccCCCCcc--------------------------------------c
Q psy14428 28 KTVYFPTPTWNGHVRFCTDSR-----LNVGAYRYFDNKTNG--------------------------------------L 64 (583)
Q Consensus 28 ~~~~~~~p~w~n~~~~~~~~~-----~~~~~y~~~~~~~~~--------------------------------------~ 64 (583)
-+-+++||+.+....+.+|.+ |.|+.|+.-+++|+. -
T Consensus 5 i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG 84 (396)
T COG1448 5 IEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFG 84 (396)
T ss_pred cccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcC
Confidence 346899999999999999987 899999999999998 1
Q ss_pred chhhhHHHHHhhhhhcccccchhhhHHHHHHHhCCCCcEEEeCCCCCCChHhHhhhcCCcccccccccCCCCCccccCcc
Q psy14428 65 DFAGMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 144 (583)
Q Consensus 65 d~~~~~~~~~~a~~q~~~gtgal~~~~~~~~~~~~~~~~~~i~~ptw~nh~~if~~~g~~~~~y~Y~~~~~~~~d~~~m~ 144 (583)
+-..++...|.+++||+|||||||+||+|+++++|. .+||||+|||+||+.||+.+|+++.+|||||.+++++||++|+
T Consensus 85 ~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~-~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 85 ADSPALAEDRVATVQTLGGTGALRVAADFLARFFPD-ATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred CCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCC-ceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHH
Confidence 122367889999999999999999999999999997 8999999999999999999999999999999999999999999
Q ss_pred c-----cchhhHhhccccccCCCCCccccCCcccc
Q psy14428 145 E-----DIKPLKQQLKGFNKDPHPKKMNLGVGAYR 174 (583)
Q Consensus 145 ~-----~~~~i~~l~~~~~~~~~~~~i~l~~g~~~ 174 (583)
. +.++++.+|.| ||||+++|++..+|.
T Consensus 164 a~L~~a~~~~vvLLH~C---cHNPTG~D~t~~qW~ 195 (396)
T COG1448 164 ADLKTAPEGSVVLLHGC---CHNPTGIDPTEEQWQ 195 (396)
T ss_pred HHHHhCCCCCEEEEecC---CCCCCCCCCCHHHHH
Confidence 8 47789999999 999999999988873
No 110
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.5e-27 Score=226.26 Aligned_cols=353 Identities=16% Similarity=0.160 Sum_probs=239.4
Q ss_pred hhhHhhcccccc-CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC----CCCCCCCCCCCHHHHHHHHHHHhCC
Q psy14428 148 KPLKQQLKGFNK-DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN----LDHEYANIGGDAKFCKLAAQLAYGE 222 (583)
Q Consensus 148 ~~i~~l~~~~~~-~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~Lr~aia~~~~~~ 222 (583)
+.+.+++..... -..++.|.|+.|.|..- |...+.+.+...+++.+. ..-+|..++|...|.++++..++++
T Consensus 14 sGi~~lMdDl~d~Lrt~g~imLggGNPa~i---Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ 90 (417)
T COG3977 14 SGITQLMDDLNDGLRTPGAIMLGGGNPARI---PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRRE 90 (417)
T ss_pred hhHHHHHHHHHhhccCCCceeeCCCCcccC---hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHH
Confidence 345555554331 24667899999998522 222234444444444432 2468999999999999999999999
Q ss_pred CCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC--EEEEc-CCCChhhHHHHhhcCCeEEE----EecccCC---C
Q psy14428 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK--TVYFP-TPTWNGHVRFCTDSRLNVGA----YRYFDNK---T 292 (583)
Q Consensus 223 ~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd--~Vlv~-~P~y~~~~~~~~~~G~~~~~----v~~~d~~---~ 292 (583)
+|++++++||.+ |+|++.+...++.++......|+ .|++| .|.|..|..+--.-.+ .|. +.+ ++. .
T Consensus 91 ygwnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~-fVs~kP~iel-~~~g~FK 166 (417)
T COG3977 91 YGWNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL-FVSAKPNIEL-LPAGQFK 166 (417)
T ss_pred hCCCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc-eeeccCCccc-cccccee
Confidence 999999999999 99999999987766655444453 56655 7889888654322111 111 111 111 1
Q ss_pred CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH
Q psy14428 293 NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK 372 (583)
Q Consensus 293 ~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~ 372 (583)
+.+|++.+.- .+.+.+++++.|.||||.+++.+|+.+|..+|++||+++|+|.+|+.=..+=...+..+ -
T Consensus 167 Y~vDF~~l~i-----~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~-----~ 236 (417)
T COG3977 167 YHVDFEHLHI-----GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATP-----L 236 (417)
T ss_pred eccCHHHccc-----ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccc-----c
Confidence 3456666532 57788999999999999999999999999999999999999999964221100001111 1
Q ss_pred hcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHH
Q psy14428 373 EVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERI 452 (583)
Q Consensus 373 ~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 452 (583)
-.+|+|.+-|+|| .|+||.|+|.+++ . +++++++...+......++..++.+++++++.+.+.+.-+++
T Consensus 237 w~~NiilC~SLSK-~GLPG~R~GIiIa--n-----e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqV--- 305 (417)
T COG3977 237 WNENIILCMSLSK-LGLPGSRCGIIIA--N-----EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQV--- 305 (417)
T ss_pred CCCCEEEEeehhh-cCCCCcceeEEEc--c-----HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHh---
Confidence 2579999999999 7899999999999 5 799999999999889999999999999999987654432211
Q ss_pred HHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeec
Q psy14428 453 MSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYT 532 (583)
Q Consensus 453 ~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~ 532 (583)
+ |--|+++-+...+.|++....-.|...+|+|..|+|.
T Consensus 306 -------I-----------------------------------rPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWL 343 (417)
T COG3977 306 -------I-----------------------------------RPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWL 343 (417)
T ss_pred -------h-----------------------------------hHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehh
Confidence 1 1122333333344444432222366788999999997
Q ss_pred CCChhhhhhhhhhhhHHHHHHHHhhcC------------CCccccccccCCcceeecC
Q psy14428 533 GLSASQGMSNRISSIREELKSKILDKG------------SKKNWDHITNQKGMFCYTG 578 (583)
Q Consensus 533 ~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ 578 (583)
.+.+--+. -+++++.||+.| -...|.|.-.+. +++|+.
T Consensus 344 Wf~dLPIt-------t~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~-Rmn~~~ 393 (417)
T COG3977 344 WFKDLPIT-------TEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCM-RMNYVP 393 (417)
T ss_pred hhccCCCC-------HHHHHHHHHhCeEEEecccccCCCCCCCCCCccceE-EEecCC
Confidence 54332221 244555555554 445788855554 677754
No 111
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.95 E-value=2.7e-25 Score=231.74 Aligned_cols=296 Identities=21% Similarity=0.239 Sum_probs=224.3
Q ss_pred cccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHH
Q psy14428 166 MNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLR 245 (583)
Q Consensus 166 i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~ 245 (583)
+||+.|.++.. +.+.+.++..+.........|.+..|..++++++++++...++....++++++ ++|+++++.
T Consensus 1 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~~ 73 (350)
T cd00609 1 IDLSIGEPDFP-----PPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEALS 73 (350)
T ss_pred CCCCCCCCCCC-----CCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHHH
Confidence 46777777532 33444444443222233677999999999999999999988777677889999 999999998
Q ss_pred HHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCCh--hhHHHHHHcCCCCcEEEEeCCCCCCC
Q psy14428 246 VGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDF--AGMMEDIKAMPERSILFLQTSSHNPT 323 (583)
Q Consensus 246 l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~--~~l~~~l~~~~~~~~~i~i~~p~NPT 323 (583)
.+ +..+..+||+|++++|+|..+...++..|.+++.++. +++ ...+. +.++... .++++++++++|+|||
T Consensus 74 ~~---~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~-~~~-~~~~~~~~~~~~~~---~~~~~~v~i~~~~~~t 145 (350)
T cd00609 74 LL---LRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPL-DEE-GGFLLDLELLEAAK---TPKTKLLYLNNPNNPT 145 (350)
T ss_pred HH---HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEec-ccc-cCCccCHHHHHhhc---CccceEEEEECCCCCC
Confidence 85 4455667999999999999999999999999999998 433 33443 3333322 5678888888899999
Q ss_pred CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCC
Q psy14428 324 GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPT 403 (583)
Q Consensus 324 G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~ 403 (583)
|.+++.+++++|+++|+++|+++|+|++|..+.+.+. ....+. ..+..+.+++++|+||.++++|+|+||+++ ++
T Consensus 146 G~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~--~~ 220 (350)
T cd00609 146 GAVLSEEELEELAELAKKHGILIISDEAYAELVYDGE--PPPALA-LLDAYERVIVLRSFSKTFGLPGLRIGYLIA--PP 220 (350)
T ss_pred CcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc--cccccc-CcCccCcEEEEeecccccCCcccceEEEec--CH
Confidence 9999999999999999999999999999999887652 111111 124456899999999999999999999999 62
Q ss_pred chhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChh
Q psy14428 404 SDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK 483 (583)
Q Consensus 404 ~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~ 483 (583)
+++++.+.........+++...|.++..+++...
T Consensus 221 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------------------------------------ 254 (350)
T cd00609 221 ----EELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE------------------------------------------ 254 (350)
T ss_pred ----HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH------------------------------------------
Confidence 2688888887777677888888888777766421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 484 LKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 484 ~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+..+++++++.++++.+.+.|++.+. +....+.+|++.|..++.
T Consensus 255 ------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~g~~~~~~~~~ 298 (350)
T cd00609 255 ------EHLEELRERYRRRRDALLEALKELGP---LVVVKPSGGFFLWLDLPE 298 (350)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHhcCC---ccccCCCccEEEEEecCC
Confidence 12455566677888888888887642 111456788999987754
No 112
>KOG0258|consensus
Probab=99.95 E-value=1.4e-25 Score=221.49 Aligned_cols=307 Identities=18% Similarity=0.165 Sum_probs=228.0
Q ss_pred CChHHHHHHHHHhcc--CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC
Q psy14428 182 VLPSVKEAERRIYEK--NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK 259 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd 259 (583)
+.+.+++| .+++.. +....|+.++|++-.|+.+|+|+.++.|++.+|++|.+ |.|++.|+..+..++ +..+.+
T Consensus 88 p~Dai~RA-~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~il~l~--~~~~~~ 162 (475)
T KOG0258|consen 88 PTDAIKRA-KRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSILSLL--IAGKKT 162 (475)
T ss_pred CHHHHHHH-HHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHHHHHH--hcCCCC
Confidence 33455554 444433 34667999999999999999999999999999999999 999999999864332 334578
Q ss_pred EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q psy14428 260 TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--PERSILFLQTSSHNPTGVDLSEDQWRQLAV 337 (583)
Q Consensus 260 ~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~ 337 (583)
.|++|-|.|+-|...+..+|...+++-+.++.+|++|.+++++.++++ .-+.+++++-||.||||.++|++.+++|+.
T Consensus 163 GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~ 242 (475)
T KOG0258|consen 163 GVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIIC 242 (475)
T ss_pred ceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHH
Confidence 999999999999999999999999998843447999999999988765 346788888999999999999999999999
Q ss_pred HHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-------cCcEEEEecCcccc-cccCccceEEEEEcCCchhHHH
Q psy14428 338 VVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-------VGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETER 409 (583)
Q Consensus 338 ~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-------~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~ 409 (583)
+|.+++++++.||+|++-.|.+. ....|++..+.. ...++.++|.||.+ |=.|-|-||+-...-+ ++
T Consensus 243 fa~~~~l~llaDEVYQ~Nvy~~~-skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~----pr 317 (475)
T KOG0258|consen 243 FAAEEGLVLLADEVYQDNVYTTG-SKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD----PR 317 (475)
T ss_pred HHHHcCeEEechHHHHhhccCCC-cchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC----hh
Confidence 99999999999999999999752 345566554322 12367888999988 5589999999873332 23
Q ss_pred HHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHH
Q psy14428 410 IMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWF 489 (583)
Q Consensus 410 li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~ 489 (583)
+.+.+.+... ...+++..+|..+-. ..+||.-|. ..++.|.
T Consensus 318 v~~qi~Kl~s-i~lc~~V~GQ~~vdl----------------------------~VnPP~Pgd----------~Sy~~~~ 358 (475)
T KOG0258|consen 318 VKQQIKKLAS-IKLCPQVSGQKLVDL----------------------------VVNPPKPGD----------PSYDLFS 358 (475)
T ss_pred HHHHHHHHHh-hhhcCCccchhhhce----------------------------ecCCCCCCC----------cchhhhh
Confidence 4444443211 111222222222111 112232221 2456777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCC--Chhhhh
Q psy14428 490 EECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGL--SASQGM 540 (583)
Q Consensus 490 ~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l--~~~~~~ 540 (583)
++-+.+.+.++.+.+++.++++.+. +..+..+||.||+|+.+ +...++
T Consensus 359 ~Ekd~il~~l~~ra~l~~~~~ns~~---gi~cn~~qGAMY~fP~i~lP~kaie 408 (475)
T KOG0258|consen 359 SEKDGILSSLRSRAKLTEDAFNSLE---GISCNPVQGAMYLFPQISLPPKAIE 408 (475)
T ss_pred hhhHhHHHHHHHHhHHHHHHHhhcC---ceeeccCccceeecccccCCHHHHH
Confidence 7788888888999999999998864 36789999999999754 444443
No 113
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.95 E-value=8.7e-26 Score=242.48 Aligned_cols=295 Identities=10% Similarity=-0.004 Sum_probs=212.7
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+.+.+.++|+.|+++.++.+|.....+.++..+.+..+ ..+|++..|.++||++++++++. ++|++ |+|
T Consensus 33 ~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-~~~Y~~~~g~~~Lreaia~~~~~--------~~vv~--t~g 101 (460)
T PRK13238 33 EAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-DEAYAGSRSYYRLEDAVKDIFGY--------PYTIP--THQ 101 (460)
T ss_pred HcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-CcccCCCCCHHHHHHHHHHHhCC--------CcEEE--CCC
Confidence 45778999999999544443332235677666666443 46799999999999999999964 46888 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-------CCC--CCChhhHHHHHHcCC-C
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-------KTN--GLDFAGMMEDIKAMP-E 309 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-------~~~--g~d~~~l~~~l~~~~-~ 309 (583)
+++|+.++ +..+++||| |++++|.|..|...++..|++++.+++ ++ +.+ .+|++.+++.+.... +
T Consensus 102 gt~A~~~~---~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~-~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~ 176 (460)
T PRK13238 102 GRAAEQIL---FPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVI-DEALDTGSRHPFKGNFDLEKLEALIEEVGAE 176 (460)
T ss_pred HHHHHHHH---HHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEec-cccccccccccccCCcCHHHHHHHHhhcCCC
Confidence 99999985 445677799 999999999999999999999999998 43 123 399999999985432 4
Q ss_pred CcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccC--CCCCCCCC---CCchHHHHHHHHhcCcEEEEecC
Q psy14428 310 RSILFLQTSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAY--LGLTSGDF---DKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y--~~l~~~~~---~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
+++++++++|||||| .+++.+++++|.++|++||++||+|+++ ....|... .....++..+ ++.++|+
T Consensus 177 ~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~~~~~s~ 250 (460)
T PRK13238 177 NVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------AREMFSY 250 (460)
T ss_pred ceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------hhhhccc
Confidence 799999999999998 9999999999999999999999999965 22333210 0012233332 3456899
Q ss_pred cccccccCccc-----eEEEEEcCCchhHHHHHHHHHHHH----hccccCC-ChHHHHHHHHHhCChhhhhhhhhHHHHH
Q psy14428 384 SKNMGLYGERV-----GTFSVLTPTSDETERIMSQLKILI----RGFYSNP-PIHGARIVTEILSDPKLKAQCDETERIM 453 (583)
Q Consensus 384 SK~~~l~GlRi-----G~lv~~~p~~~~~~~li~~l~~~~----~~~~~~~-s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 453 (583)
+|.+.++|+|+ |++++. ++ ++++++++... ....++. +...|.+++..+.+..
T Consensus 251 ~D~~~~Sg~K~g~~~~GG~i~~-~d----~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~------------ 313 (460)
T PRK13238 251 ADGLTMSAKKDAMVNIGGLLCF-RD----EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM------------ 313 (460)
T ss_pred CcEEEEecccCCCCcceeEEEc-Ch----HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh------------
Confidence 99999999997 444441 43 47888887763 3323333 5555777776554300
Q ss_pred HHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecC
Q psy14428 454 SQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTG 533 (583)
Q Consensus 454 ~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~ 533 (583)
...+ +..+ .++|+.|.+.|++.+ +.+..|++|+|+|++
T Consensus 314 -------------------------------~~~~---~~~~----~~~~~~l~~~L~~~G----~~~~~p~Gg~~v~~d 351 (460)
T PRK13238 314 -------------------------------DEDY---LAYR----IGQVEYLGEGLEEAG----VPIQTPAGGHAVFVD 351 (460)
T ss_pred -------------------------------ChHH---HHHH----HHHHHHHHHHHHHCC----CCeEccCCceEEEEE
Confidence 0011 1111 235788889998866 557889999999987
Q ss_pred CC
Q psy14428 534 LS 535 (583)
Q Consensus 534 l~ 535 (583)
+.
T Consensus 352 ~~ 353 (460)
T PRK13238 352 AG 353 (460)
T ss_pred ch
Confidence 64
No 114
>KOG0633|consensus
Probab=99.92 E-value=1.5e-24 Score=203.47 Aligned_cols=242 Identities=19% Similarity=0.206 Sum_probs=189.6
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC-CEEEEcCCCChhhHHHHhhcCCeEEEEe
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV-KTVYFPTPTWNGHVRFCTDSRLNVGAYR 286 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 286 (583)
..+|+.++++- -++++|+|++ ..|+-+.+++ +++..|.|| ++|++-.|+|..|.--+...+++++.+|
T Consensus 71 nk~ls~a~~~d------kpLt~dnic~--GvGsDE~ID~---iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvp 139 (375)
T KOG0633|consen 71 NKRLSDALAQD------KPLTSDNICV--GVGSDELIDL---IIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVP 139 (375)
T ss_pred cchhhhhcccC------CCCCccceEE--ecCcHHHHHH---HHhheecCCccceeecCCcceeEEEEeecCCceEEEec
Confidence 35555555432 4688999999 9999988888 467788888 8999999999999888888999999999
Q ss_pred cccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH
Q psy14428 287 YFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS 366 (583)
Q Consensus 287 ~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~ 366 (583)
+ .+ ++.+|.+.+.+.++. ....+.+++++|+||||..++.+.+++|++.- -|.+||.||+|.+|.-.+ |
T Consensus 140 l-~p-dF~lnvdai~evl~~-ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p--~nglVVvDEAYidFsg~~------S 208 (375)
T KOG0633|consen 140 L-NP-DFSLNVDAIAEVLEL-DSKIKCIFLTSPGNPTGSIIKEDDILKILEMP--DNGLVVVDEAYIDFSGVE------S 208 (375)
T ss_pred C-CC-CccccHHHHHHHHhc-cccceEEEEcCCCCCCcccccHHHHHHHHhCC--CCcEEEEeeeeEeecccc------c
Confidence 9 44 599999999988864 45788999999999999999999999998743 278999999999998543 2
Q ss_pred HHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhh
Q psy14428 367 LRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQC 446 (583)
Q Consensus 367 ~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 446 (583)
-..+...++|++++.+|||+||++|+|+||-.. | ..+++.|...+. .++.|.++..++..++++...++.-
T Consensus 209 ~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~--~-----~~ia~iln~~Ka--PYNiS~~~s~~AL~Als~~n~kkme 279 (375)
T KOG0633|consen 209 RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAF--P-----LSIAEILNRAKA--PYNISVAGSVAALAALSDSNGKKME 279 (375)
T ss_pred cchHhHhCCceeehhhhhhhcCcceeEeecccc--c-----HHHHHHHHhccC--CccccchhHHHHHHhcCcccchHHH
Confidence 333456789999999999999999999999998 6 467777776654 3577888888888888865554444
Q ss_pred hhHHHHHHHHHHHHhhc-----cC--CCccchhhHHHHhcC
Q psy14428 447 DETERIMSQLKILIRGF-----YS--NPPIHGARIVTEILS 480 (583)
Q Consensus 447 ~~~~~~~~~l~~~~r~~-----~~--~~p~~g~~i~~~~l~ 480 (583)
.....+.+++.+++..+ +. .-++.++||++++..
T Consensus 280 ~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~ 320 (375)
T KOG0633|consen 280 DVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTG 320 (375)
T ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcC
Confidence 44444555555554322 22 456778999999874
No 115
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.91 E-value=4e-23 Score=218.95 Aligned_cols=227 Identities=11% Similarity=0.039 Sum_probs=169.6
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+.+-+.+.|..+++--++.++--...+.++..+.+..+ ...|.+..|.++||++++++++. +++++ |+|
T Consensus 8 ~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~g-d~~Y~~~~g~~~Leeaia~~~g~--------~~vv~--t~~ 76 (431)
T cd00617 8 EAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLG-DEAYAGSKSFYDLEDAVQDLFGF--------KHIIP--THQ 76 (431)
T ss_pred HcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhC-CCccCCCCCHHHHHHHHHHHHCC--------CeEEE--cCC
Confidence 35667788888888333332211234444444444333 35699999999999999999975 46788 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC---------CCCCChhhHHHHHHcC-CC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK---------TNGLDFAGMMEDIKAM-PE 309 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~---------~~g~d~~~l~~~l~~~-~~ 309 (583)
|++|+.++ +..+++|||.| +++|+|..+...+...|++++.+++ +++ .+.+|++.+++.+... .+
T Consensus 77 Gt~Al~la---~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i-~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~ 151 (431)
T cd00617 77 GRGAENIL---FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVI-DEAHDAQELIPFKGNIDVAKLEKLIDEVGAE 151 (431)
T ss_pred HHHHHHHH---HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEec-ccccccccccCCCCCcCHHHHHHHhCcccCC
Confidence 99999985 44567779987 6999999999999999999999998 432 2348999999998543 23
Q ss_pred CcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEeccCC--CCCC-----CCCCCchHHHHHHHHhcCcEEEEe
Q psy14428 310 RSILFLQTSSHNPT-GVDLSEDQWRQLAVVVKQRHLYPFFDMAYL--GLTS-----GDFDKDAFSLRYFAKEVGQLCLAQ 381 (583)
Q Consensus 310 ~~~~i~i~~p~NPT-G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~--~l~~-----~~~~~~~~~~~~~~~~~~~vi~i~ 381 (583)
+++++++++||||+ |.+++.+++++|.++|++||++||+|++.. ...+ ++. ...++.. .++.+.
T Consensus 152 ~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~--~~~si~e------i~~e~~ 223 (431)
T cd00617 152 NIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGY--RDKSIAE------IAREMF 223 (431)
T ss_pred CccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccc--cCCCHHH------HHHHhh
Confidence 47889999999998 999999999999999999999999999932 1112 111 1123332 245678
Q ss_pred cCcccccccCcc------ceEEEEEcCCchhHHHHHHHHHH
Q psy14428 382 SFSKNMGLYGER------VGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 382 S~SK~~~l~GlR------iG~lv~~~p~~~~~~~li~~l~~ 416 (583)
|+||.+.|+|+| .||+++ ++ ++++++++.
T Consensus 224 s~sd~~~mS~~K~~~~~~GG~i~~--~d----~~l~~~~~~ 258 (431)
T cd00617 224 SYADGCTMSAKKDGLVNIGGFLAL--RD----DELYEEARQ 258 (431)
T ss_pred ccCCEEEEEeecCCCCccceEEEe--Cc----HHHHHHHHH
Confidence 999999999998 558888 64 368887764
No 116
>KOG1411|consensus
Probab=99.91 E-value=8.6e-26 Score=219.69 Aligned_cols=141 Identities=36% Similarity=0.650 Sum_probs=122.6
Q ss_pred EEecCCCCcCchhhhhhcCC-----CceeeeeccCCCCcc--------------------------cchh----------
Q psy14428 29 TVYFPTPTWNGHVRFCTDSR-----LNVGAYRYFDNKTNG--------------------------LDFA---------- 67 (583)
Q Consensus 29 ~~~~~~p~w~n~~~~~~~~~-----~~~~~y~~~~~~~~~--------------------------~d~~---------- 67 (583)
+-=+|||++|...++.+|.. |.|+.||+-.++--. ..|.
T Consensus 32 ~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~ 111 (427)
T KOG1411|consen 32 EMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGD 111 (427)
T ss_pred CCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcC
Confidence 34689999999999999965 889999986665322 3333
Q ss_pred --hhHHHHHhhhhhcccccchhhhHHHHHHHhCCCCcEEEeCCCCCCChHhHhhhcCCcccccccccCCCCCccccCccc
Q psy14428 68 --GMMEDIKLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 145 (583)
Q Consensus 68 --~~~~~~~~a~~q~~~gtgal~~~~~~~~~~~~~~~~~~i~~ptw~nh~~if~~~g~~~~~y~Y~~~~~~~~d~~~m~~ 145 (583)
..|++.|++++||+|||||||+||+||++++|. +.+|||+|||+||..||+.+|++++.|+|||+.++++||++|++
T Consensus 112 ~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~-~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~le 190 (427)
T KOG1411|consen 112 NSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPS-RDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLE 190 (427)
T ss_pred CchhhhccceeEEEeccCcchhhHHHHHHHhhccc-cceeecCCcccccCccccccCcceeeeeeccccccccchHHHHH
Confidence 456678999999999999999999999999996 99999999999999999999999999999999999999999998
Q ss_pred c-----chhhHhhccccccCCCCCccccCCccc
Q psy14428 146 D-----IKPLKQQLKGFNKDPHPKKMNLGVGAY 173 (583)
Q Consensus 146 ~-----~~~i~~l~~~~~~~~~~~~i~l~~g~~ 173 (583)
. ++.++.+|.| +|+|+++|.+..+|
T Consensus 191 dl~~~p~gs~ilLhaC---aHNPTGvDPt~eqw 220 (427)
T KOG1411|consen 191 DLGEAPEGSIILLHAC---AHNPTGVDPTKEQW 220 (427)
T ss_pred HHhcCCCCcEEEeehh---hcCCCCCCccHHHH
Confidence 4 7778889988 78999887766555
No 117
>PRK10534 L-threonine aldolase; Provisional
Probab=99.90 E-value=3.1e-22 Score=208.07 Aligned_cols=271 Identities=13% Similarity=0.029 Sum_probs=174.7
Q ss_pred cccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHH
Q psy14428 166 MNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLR 245 (583)
Q Consensus 166 i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~ 245 (583)
|||+.... |.|++.+.+++.+.... ...|+|..+..+|++++|++++. +.+++ ++|+++++.
T Consensus 2 ~~~~~~~~------~~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~g~--------~~~~v--~~~g~~a~~ 63 (333)
T PRK10534 2 IDLRSDTV------TRPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSGK--------EAALF--LPTGTQANL 63 (333)
T ss_pred cccccccC------CCCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHhCC--------CeEEE--eCchHHHHH
Confidence 45665554 23667888887664432 45788888999999999999752 34456 778887776
Q ss_pred HHHHHHHHhCCCCCEEEEcCCCChh-hHHH-HhhcC-CeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCC
Q psy14428 246 VGTAFLERFYPGVKTVYFPTPTWNG-HVRF-CTDSR-LNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSS 319 (583)
Q Consensus 246 l~~~~l~~~~~~gd~Vlv~~P~y~~-~~~~-~~~~G-~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p 319 (583)
+. + ..++.+||+|+++.|+|.. |... ....| ++++.++. + +++.+|++.+++++... ..+++++++|||
T Consensus 64 ~~--l-~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np 138 (333)
T PRK10534 64 VA--L-LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA-A-ADGTLPLDKVAAKIKPDDIHFARTRLLSLENT 138 (333)
T ss_pred HH--H-HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC-C-CCCCCCHHHHHHhhcccCcCcccceEEEEecC
Confidence 64 2 2345679999999888753 3221 23333 67888877 4 35788999998877321 015788999976
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccce-EEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG-TFS 398 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG-~lv 398 (583)
+ ||.+++.+++++|+++|++++++||+||+|........ . .+...+....++++ .||||.|+++ +| |++
T Consensus 139 ~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~--~-~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~ 208 (333)
T PRK10534 139 H--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAY--G-CELKEITQYCDSFT--ICLSKGLGTP---VGSLLV 208 (333)
T ss_pred C--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHc--C-CCHHHHHhcCCEEE--EEeEcCCCCc---ccceEE
Confidence 6 59999999999999999999999999999863211000 0 11222222223444 3899988764 78 577
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccC--CChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhH
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSN--PPIHGARIVTEILSD--PKLKAQCDETERIMSQLKILIRGFYSNPPIHGARI 474 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~--~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i 474 (583)
+ + +++++++.+.+.....+ .+.+.|.++...+++ ..+++..+++..+.+.+.+ .++...|++++|+
T Consensus 209 ~--~-----~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~---~g~~~~~~~~nfv 278 (333)
T PRK10534 209 G--N-----RDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLRE---AGADVMRQDTNML 278 (333)
T ss_pred c--C-----HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh---CCCccCCCCceEE
Confidence 6 5 58999998877654323 334667777666654 1222211112122222222 2455666689999
Q ss_pred HHHhc
Q psy14428 475 VTEIL 479 (583)
Q Consensus 475 ~~~~l 479 (583)
|+++.
T Consensus 279 ~~~~~ 283 (333)
T PRK10534 279 FVRVG 283 (333)
T ss_pred EEECC
Confidence 88764
No 118
>PRK07049 methionine gamma-lyase; Validated
Probab=99.89 E-value=8.1e-22 Score=210.43 Aligned_cols=199 Identities=18% Similarity=0.145 Sum_probs=158.5
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G 279 (583)
+..-...|+++||++.+ .+++++ ++||++|+..+ +..++++||.|++++|+|..+...+ +..|
T Consensus 81 ~~Pt~~~Le~~lA~leg--------~~~~iv--~~sG~~Ai~~~---l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 81 NHPNSEIVEDRLAVYEG--------AESAAL--FSSGMSAIATT---LLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred CCcCHHHHHHHHHHHhC--------CCcEEE--EccHHHHHHHH---HHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 34446899999999875 246777 88888898874 4556677999999999999997664 5679
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh---cCeEEEEeccCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAM--PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ---RHLYPFFDMAYLG 354 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~---~~i~iI~De~Y~~ 354 (583)
++++.++. +.|++.+++.+... .+++++++++||+||||.+++.+++.+|++.|.. ++++||+||+|..
T Consensus 148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 88777753 23677777766432 3578999999999999999999999999998754 6899999999876
Q ss_pred CCCCCCCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHH
Q psy14428 355 LTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIV 433 (583)
Q Consensus 355 l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~ 433 (583)
..... ++ ..+..|++.||||.++ .+|+|+||+++ + +++++++.+.+.....+.+++.|+++
T Consensus 222 ~~~~~------pl-----~~g~divv~S~SK~~gG~~glr~G~vv~--~-----~~l~~~l~~~~~~~g~~ls~~~a~l~ 283 (427)
T PRK07049 222 PVFQK------PL-----EHGADLSVYSLTKYVGGHSDLVAGAVLG--R-----KALIRQVRALRSAIGTQLDPHSCWML 283 (427)
T ss_pred cccCC------cc-----ccCCCEEEEcCceeecCCCCcEEEEEEC--C-----HHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 54321 12 1245788899999998 69999999998 6 57899999888777888999999999
Q ss_pred HHHhCC
Q psy14428 434 TEILSD 439 (583)
Q Consensus 434 ~~~l~~ 439 (583)
...++.
T Consensus 284 ~r~L~t 289 (427)
T PRK07049 284 GRSLET 289 (427)
T ss_pred HcCCCh
Confidence 998874
No 119
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.88 E-value=1.4e-20 Score=195.62 Aligned_cols=246 Identities=11% Similarity=0.058 Sum_probs=168.9
Q ss_pred hHHHHHHHHHhccCCCCCCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEE
Q psy14428 184 PSVKEAERRIYEKNLDHEYA-NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVY 262 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~-~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vl 262 (583)
+.+.++..+..+. |. +..-..+|++++|++++ ++++++++ ++|+.+++..+ +..+.++||.|+
T Consensus 36 ~~~~~~~~~~~~~-----~~g~~~~~~~Le~~lA~~~g------~~~e~ilv--~~gg~~a~~~~---~~al~~~gd~Vl 99 (346)
T TIGR03576 36 FKIDEEDLELLET-----YVGPAIFEEKVQELGREHLG------GPEEKILV--FNRTSSAILAT---ILALEPPGRKVV 99 (346)
T ss_pred hhHHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHcC------CCcceEEE--ECCHHHHHHHH---HHHhCCCCCEEE
Confidence 5666666665543 31 11223455555555553 36789999 99999999884 556777899999
Q ss_pred Ec---CCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 263 FP---TPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 263 v~---~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
++ .|+|..|...++..|++++.+ . +++.+ +. .++++++++ +++||+|.+++.+++++|+++|
T Consensus 100 i~~~d~p~~~s~~~~~~l~ga~~~~~-----~----~l~~l----~~-~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la 164 (346)
T TIGR03576 100 HYLPEKPAHPSIPRSCKLAGAEYFES-----D----ELSEL----KK-IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQA 164 (346)
T ss_pred ECCCCCCCchhHHHHHHHcCCEEecc-----C----CHHHH----hh-CcCceEEEE-ECCCCCCcccCHHHHHHHHHHH
Confidence 75 478999999999999876322 1 33332 22 234566666 5679999999999999999999
Q ss_pred HhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHh
Q psy14428 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIR 419 (583)
Q Consensus 340 ~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~ 419 (583)
++++++||+||+|..+..+..... +...+ . .-+++.|||| +++|+|+||+++ + +++++.+.+..+
T Consensus 165 ~~~~~~livDEAy~~~~~~~~~~~--~~~~~---~-~divv~s~SK--alaG~r~G~v~~--~-----~~li~~l~~~~~ 229 (346)
T TIGR03576 165 KSKEAIVLVDDASGARVRRLYGQP--PALDL---G-ADLVVTSTDK--LMDGPRGGLLAG--R-----KELVDKIKSVGE 229 (346)
T ss_pred HHcCCEEEEECCccccccccCCCC--CHHHc---C-CcEEEeccch--hccccceEEEEe--C-----HHHHHHHHHhhc
Confidence 999999999999998764311011 12221 2 2366779999 579999999999 7 589999999888
Q ss_pred ccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh---ccCCCccchhhHHHHhc
Q psy14428 420 GFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG---FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 420 ~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~---~~~~~p~~g~~i~~~~l 479 (583)
...++++++.|.++..+|+.... ...+..+..+..+++. .+...|+.++|+|+++.
T Consensus 230 ~~~~s~~~~~~~aa~~aL~~~~~----~~~~~~l~~r~~~~~~~l~~~~~~~~~~~f~~~~~~ 288 (346)
T TIGR03576 230 QFGLEAQAPLLAAVVRALEEFEL----SRIRDAFKRKEEVYLRLFDKLNVERTPTGFVIKGVE 288 (346)
T ss_pred CcccCccHHHHHHHHHHHhhccH----HHHHHHHHHHHHHHHHHHHhCCCCcCCCeEEEEeCC
Confidence 77777889999999999875321 1223333333333221 24555666778888764
No 120
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.88 E-value=1.7e-20 Score=196.84 Aligned_cols=220 Identities=15% Similarity=0.094 Sum_probs=155.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CC-CCCCCCCCC----CHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NL-DHEYANIGG----DAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~-~~~Y~~~~G----~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
.+.+.+||+.|.+ .|.+ .++.+.+++.+.+.. +. ...|....| ..+++++++++++ .+++|++
T Consensus 14 ~g~~~id~~~~~~---~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~ 82 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLA-SHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLF 82 (360)
T ss_pred CCceEEecccCCc---ccCC-CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEE
Confidence 4567899999843 3322 446777777776654 11 112222234 4558888888875 2467887
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC-CCcEE
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-ERSIL 313 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-~~~~~ 313 (583)
++|+.+.+ .+ +..++.+||+|++++|+|..+...++..|++++.++. +|++.+++.++... .++++
T Consensus 83 --~~G~~~~~-~~---l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~ 149 (360)
T TIGR00858 83 --SSGYLANV-GV---ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKL 149 (360)
T ss_pred --CchHHHHH-HH---HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeE
Confidence 88865544 32 3345677999999999999999999999999887754 37888888876432 45789
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc
Q psy14428 314 FLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 314 i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR 393 (583)
+++++++||||...+ +++|.++|++++++||+||+|..+.++.......+...+ +..+++|+++||||+|+++|
T Consensus 150 v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~g-- 223 (360)
T TIGR00858 150 IVTDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGL-KPEPVDIQVGTLSKALGSYG-- 223 (360)
T ss_pred EEEeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCC-CccCCcEEEEechhhhhccC--
Confidence 999999999998776 567788899999999999999877665310111111111 22468999999999999777
Q ss_pred ceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 394 VGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 394 iG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
||+++ + +++++.+....
T Consensus 224 -G~~~~--~-----~~~~~~~~~~~ 240 (360)
T TIGR00858 224 -AYVAG--S-----QALIDYLINRA 240 (360)
T ss_pred -cEEEc--C-----HHHHHHHHHhC
Confidence 99998 6 57888776543
No 121
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.88 E-value=7.7e-21 Score=202.35 Aligned_cols=222 Identities=10% Similarity=0.022 Sum_probs=159.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCC---CCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEY---ANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y---~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
.+.+.|+|+.|.+. +.+ +++.+.++..+.+... ...| ....|.+++|+++++++.+.+|. +++|++ |
T Consensus 40 ~g~~~i~l~~~~~~---~~~-~~~~i~~a~~~~~~~~-~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--t 109 (397)
T PRK06939 40 DGKEVINFCANNYL---GLA-NHPELIAAAKAALDSH-GFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--S 109 (397)
T ss_pred CCCeEEEeeccCcc---ccC-CCHHHHHHHHHHHHHc-CCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--c
Confidence 45678999988742 111 4567777777766542 1233 33579999999999999887663 378888 8
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEE
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILF 314 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i 314 (583)
+| ++++..+ +..++++||.|++++|+|+.+...++..|++++.++. .|++.+++.++.. ..+++++
T Consensus 110 sG-~~a~~~~---~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v 178 (397)
T PRK06939 110 SC-FDANGGL---FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLI 178 (397)
T ss_pred Ch-HHHHHHH---HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEE
Confidence 88 6677764 4456778999999999999999999999999877754 2778888777542 2367888
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH-hcCcEEEEecCcccccccCcc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK-EVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~l~GlR 393 (583)
++.+.+||||.. +++++|+++|++++++||+||+|....++.. ....... .+ ..+.+++++||||.++ |+|
T Consensus 179 ~~~~v~~~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~--~~~~~~~-~~~~~~~~i~~~S~sK~~~--g~r 250 (397)
T PRK06939 179 ATDGVFSMDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGEN--GRGTVEH-FGVMDRVDIITGTLGKALG--GAS 250 (397)
T ss_pred EEecCcCCCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCC--CCCHHHH-cCCCCCCcEEEEECHHHhC--ccC
Confidence 888889999974 4578889999999999999999963222210 1111111 11 1235799999999984 669
Q ss_pred ceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 394 VGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 394 iG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
+||+++ | +++++.+....
T Consensus 251 ~G~v~~--~-----~~~~~~l~~~~ 268 (397)
T PRK06939 251 GGYTAG--R-----KEVIDWLRQRS 268 (397)
T ss_pred ceEEEe--C-----HHHHHHHHHhC
Confidence 999999 7 57888887643
No 122
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=1.1e-20 Score=201.32 Aligned_cols=248 Identities=10% Similarity=0.071 Sum_probs=175.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|+. .+.+.+++.+.+... .+....+..++++++++++.+..+ .+++++ |+||
T Consensus 37 dg~~~iD~~~g~~~~~lG~~--~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~la~~l~~~~~----~~~v~~--~~gg 105 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHC--HPKLVEAIQEQAAKL---IHTSNLYYIEPQEELAEKLVELSG----MDKVFF--CNSG 105 (396)
T ss_pred CCCEEEECCccHHhccCCCC--CHHHHHHHHHHHhhc---cccccccCCHHHHHHHHHHHhhcC----CCEEEE--CCCc
Confidence 34567899988887666642 367887777766542 111223346889999999987643 379999 9999
Q ss_pred hhHHHHHHHHHHHhCCC----CCEEEEcCCCChhhHHHHhhcCCeE-EEEecccCCCCCC------ChhhHHHHHHcCCC
Q psy14428 241 SGSLRVGTAFLERFYPG----VKTVYFPTPTWNGHVRFCTDSRLNV-GAYRYFDNKTNGL------DFAGMMEDIKAMPE 309 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~----gd~Vlv~~P~y~~~~~~~~~~G~~~-~~v~~~d~~~~g~------d~~~l~~~l~~~~~ 309 (583)
++|+.++..++.....+ .++|++.+++|..+.......+... ...+. .+-..++ |++.+++.+ .+
T Consensus 106 ~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~l~~~i---~~ 181 (396)
T PRK02627 106 AEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGF-EPLVEGFIYVPFNDIEALKAAI---TD 181 (396)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccC-CCCCCCceEeCCCCHHHHHHhc---CC
Confidence 99999976554433221 1789999999987765544443222 11111 0101133 788888777 46
Q ss_pred CcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 310 RSILFLQTSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
+++++++.++|||+| .+++++.+++|.++|++++++||+||+|.+|.+.+ ...+...+ +..++ +.||||.++
T Consensus 182 ~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g---~~~~~~~~-~~~pd---i~t~sK~~~ 254 (396)
T PRK02627 182 KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG---KLFAYQHY-GIEPD---IMTLAKGLG 254 (396)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC---ceeeehhc-CCCCC---EEEEcchhh
Confidence 788888888899999 78999999999999999999999999999987654 11122121 21223 347999999
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+|+|+||+++ + +++++.+........++.+++.|.++.+.++
T Consensus 255 -~G~rig~~~~--~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 296 (396)
T PRK02627 255 -GGVPIGAVLA--K-----EKVADVFTPGDHGSTFGGNPLACAAALAVIE 296 (396)
T ss_pred -CCcccEEEEE--c-----HHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999 7 5788888765555677889999999888886
No 123
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.87 E-value=2.8e-20 Score=197.32 Aligned_cols=242 Identities=13% Similarity=0.080 Sum_probs=172.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-C-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-N-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+++.+||+.+.+. +.+ +++.+.++..+...+ . ....|.+..|.+++|+++++++.+..+. ++.|++ |+
T Consensus 31 ~g~~~id~~~~~~~---g~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~s 101 (385)
T TIGR01825 31 NGKEVINLSSNNYL---GFA-DHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QS 101 (385)
T ss_pred CCceEEEeeccCcc---CCC-CCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--Cc
Confidence 35678999887531 221 456777777666653 2 2346888899999999999999887663 456888 88
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-CCCcEEEEeC
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-PERSILFLQT 317 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-~~~~~~i~i~ 317 (583)
|+ +++..+ +..++.+||.|++++|+|..+...++..|++++.++ .+|++.+++.+.+. .+++++++++
T Consensus 102 G~-~a~~~a---~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~ 170 (385)
T TIGR01825 102 GF-NTNQGV---LSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTD 170 (385)
T ss_pred HH-HHHHHH---HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEe
Confidence 85 455543 344567799999999999999888888888876553 34788888777543 3468899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
+++||||.+.+ +++|.++|++|++++|+||+|..+.++.. .......+.-..+.++++.||||.++++| ||+
T Consensus 171 ~v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~ 242 (385)
T TIGR01825 171 GVFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEA--GRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYA 242 (385)
T ss_pred cCCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCC--CCccHhhcCCCcCCcEEEEeccHHhhcCC---CEE
Confidence 99999999887 56789999999999999999988766521 11111111112467999999999998766 999
Q ss_pred EEEcCCchhHHHHHHHHHHHHh-cccc-CCChHHHHHHHHHh
Q psy14428 398 SVLTPTSDETERIMSQLKILIR-GFYS-NPPIHGARIVTEIL 437 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~-~~~~-~~s~~~q~~~~~~l 437 (583)
++ + +++++.+..... .... ..+++.|.++...+
T Consensus 243 ~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 277 (385)
T TIGR01825 243 AG--H-----KELIEYLKNRARPFLFSTAQPPAVVAALAAAV 277 (385)
T ss_pred ec--C-----HHHHHHHHHhCccccccCCCCHHHHHHHHHHH
Confidence 88 6 578888876533 2222 23456666665554
No 124
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.87 E-value=3.3e-20 Score=196.32 Aligned_cols=285 Identities=13% Similarity=0.112 Sum_probs=184.8
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC--CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL--DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+...||+..|.+.+..|. ..+.+.+++.+...+.. ...| + .+.++.+++.+.+.++. +++++ ++|
T Consensus 26 g~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~-~----~~~~~~l~~~la~~~g~----~~~~~--~~s 92 (379)
T TIGR00707 26 GKEYLDFVAGIAVNSLGH--AHPKLVEALKEQLEKLVHVSNLY-Y----TEPQEELAEKLVEHSGA----DRVFF--CNS 92 (379)
T ss_pred CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhcccccccc-C----CHHHHHHHHHHHhhCCC----CEEEE--eCC
Confidence 456789998877666663 34777777776665421 1223 2 23444455555444443 48999 999
Q ss_pred chhHHHHHHHHHHHhCC----CCCEEEEcCCCChhhHHHHhhcCCeEEE----EecccCCCCCC----ChhhHHHHHHcC
Q psy14428 240 GSGSLRVGTAFLERFYP----GVKTVYFPTPTWNGHVRFCTDSRLNVGA----YRYFDNKTNGL----DFAGMMEDIKAM 307 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~----~gd~Vlv~~P~y~~~~~~~~~~G~~~~~----v~~~d~~~~g~----d~~~l~~~l~~~ 307 (583)
|++++.++..+++.+.. ++|+|++++|+|..+.......+..... .++ ..+ ..+ |++.+++.+
T Consensus 93 g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~d~~~l~~~~--- 167 (379)
T TIGR00707 93 GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPL-VPG-FSYAPYNDIESLKKAI--- 167 (379)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCC-CCC-ceeeCCCCHHHHHHHh---
Confidence 99999987555443332 3799999999998887666655554321 222 111 111 778888777
Q ss_pred CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 308 PERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
.+++++++++.++||+|.. ++.+++++|.++|++++++||+||+|.+|.+.+ ...+.... ...++++ +|||.
T Consensus 168 ~~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g---~~~~~~~~-~~~~d~~---t~sK~ 240 (379)
T TIGR00707 168 DDETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG---KFFAYEHY-GIEPDII---TLAKG 240 (379)
T ss_pred hhCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhhHHhc-CCCCCEE---EEccc
Confidence 4467788876556666753 799999999999999999999999999887654 11222221 2223433 78999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhHHHH-HHHHHHHHh-
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDETERI-MSQLKILIR- 461 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~-~~~l~~~~r- 461 (583)
++ +|+|+||+++ + +++++.+........++.+.+.|.++...++ ++.+.+++.+.++. .+.+.+...
T Consensus 241 ~~-~G~riG~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 312 (379)
T TIGR00707 241 LG-GGVPIGATLA--K-----EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKN 312 (379)
T ss_pred cc-CCcccEEEEE--c-----HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99 9999999999 6 5788888875555566789999999986664 44444554444332 233333322
Q ss_pred hccCCCccchhhHHHHhc
Q psy14428 462 GFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 462 ~~~~~~p~~g~~i~~~~l 479 (583)
..+...+..|.++|..+.
T Consensus 313 ~~~~~~~~~g~~~~~~~~ 330 (379)
T TIGR00707 313 YPNKEVRGKGLMLGIELE 330 (379)
T ss_pred CCCCccccCceEEEEEec
Confidence 122223446777777654
No 125
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.87 E-value=1.9e-20 Score=194.97 Aligned_cols=264 Identities=13% Similarity=0.032 Sum_probs=179.1
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
+++.+.+++.+.... ...|.+..+..+|++.++++++ ++++++ ++||++++.++ +..++++||+|
T Consensus 10 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~~a~~~g--------~~~~~~--~~~gt~a~~~~---~~~l~~~gd~v 74 (338)
T cd06502 10 PTPEMLEAMAAANVG--DDVYGEDPTTAKLEARAAELFG--------KEAALF--VPSGTAANQLA---LAAHTQPGGSV 74 (338)
T ss_pred CCHHHHHHHHhcccC--CcccCCCHHHHHHHHHHHHHhC--------CCeEEE--ecCchHHHHHH---HHHhcCCCCeE
Confidence 557888887764432 2367777788899999988875 356777 78888888874 45567789999
Q ss_pred EEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC----CCCcEEEEeCCCCCCCCCCCCHHHHHH
Q psy14428 262 YFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM----PERSILFLQTSSHNPTGVDLSEDQWRQ 334 (583)
Q Consensus 262 lv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~----~~~~~~i~i~~p~NPTG~~~s~~~~~~ 334 (583)
++++|+|..... .....|++++.++. +. +.+|++.+++.+... .+++++++++||||| |.+++.+++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~ 150 (338)
T cd06502 75 ICHETAHIYTDEAGAPEFLSGVKLLPVPG-EN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKA 150 (338)
T ss_pred EEecCcceeeecCCcHHHHcCceEEeecC-CC--CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHH
Confidence 999999875432 34557999999987 33 578999999988532 136789999999998 77789999999
Q ss_pred HHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 335 LAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 335 l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
|+++|++++++||+||+|..+..... .. ++..+. .... +++.|+||.|++|| |++++ .+ +++++++
T Consensus 151 i~~~~~~~~~~livDea~~~~~~~~~--~~-~~~~~~-~~~d-~~~~s~sK~~~~~~---g~~~~--~~----~~~~~~~ 216 (338)
T cd06502 151 ISALAKENGLPLHLDGARLANAAAAL--GV-ALKTYK-SGVD-SVSFCLSKGGGAPV---GAVVV--GN----RDFIARA 216 (338)
T ss_pred HHHHHHHcCCeEeechHHHHHHHHhc--CC-CHHHHH-hcCC-EEEEeccccCCCcc---ceEEE--CC----HHHHHHH
Confidence 99999999999999999864432110 01 222221 2223 45779999999887 65543 22 5788888
Q ss_pred HHHHhcc--ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh-ccCCCccchhhHHHHh
Q psy14428 415 KILIRGF--YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG-FYSNPPIHGARIVTEI 478 (583)
Q Consensus 415 ~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~-~~~~~p~~g~~i~~~~ 478 (583)
....... ....+.+.|.++...+++..+.+..++.....+.+.+.++. .....|+.++++....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~ 283 (338)
T cd06502 217 RRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGGLESEVQTNIVLLDP 283 (338)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCeEEEec
Confidence 7765332 23456778888888887654444333333333333333322 2334455666665554
No 126
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.86 E-value=3.6e-20 Score=184.95 Aligned_cols=303 Identities=16% Similarity=0.170 Sum_probs=191.9
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-----CC--------CCCEEEEc
Q psy14428 199 DHEY-ANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-----YP--------GVKTVYFP 264 (583)
Q Consensus 199 ~~~Y-~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-----~~--------~gd~Vlv~ 264 (583)
..+| +...|+++.|+-.|+.+. ++++||++ |++.++.+...++... .. +.-+.++|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~llg------v~~~~viv----~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELLG------VPPENVIV----GGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHHT------S-GGGEEE-----SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred ccCCCCccCChHHHHHHHHHHhC------CCHHHEEE----eccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 5789 899999999999999996 77899988 7788888765544321 11 12367999
Q ss_pred CCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH-HHhcC
Q psy14428 265 TPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVV-VKQRH 343 (583)
Q Consensus 265 ~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~-a~~~~ 343 (583)
.|+|..+..+.+..|++.++||+ .+ .|+|.+.+++.+.+....+-+.++|..+||||.++|.|..++|+.+ ....+
T Consensus 131 vPGYDRHFai~E~~Giemi~VpM-~~--dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~D 207 (425)
T PF12897_consen 131 VPGYDRHFAITEHFGIEMIPVPM-TE--DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPD 207 (425)
T ss_dssp ES--HHHHHHHHHCT-EEEEEEE-ET--TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT
T ss_pred CCCchHHHHHHHhhCcEEEecCC-CC--CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcC
Confidence 99999999999999999999999 44 5899999999886656667788899999999999999999999988 44689
Q ss_pred eEEEEeccCCCCCC-CCCCCch-HHHHHH---HHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 344 LYPFFDMAYLGLTS-GDFDKDA-FSLRYF---AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 344 i~iI~De~Y~~l~~-~~~~~~~-~~~~~~---~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
.-|+-|++|.--.+ ++.+... ..+... ....++++.+.|.||.- .||-.|+++.+ + ++.++.+++..
T Consensus 208 FRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aa--S-----~~Nl~~~~~~~ 279 (425)
T PF12897_consen 208 FRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAA--S-----EANLAWIKKHL 279 (425)
T ss_dssp -EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE--------HHHHHHHHHHH
T ss_pred eEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeec--C-----HHHHHHHHHHh
Confidence 99999999975554 2211111 122222 23468999999999977 59999999999 6 57888888887
Q ss_pred hccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHH
Q psy14428 419 RGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNR 498 (583)
Q Consensus 419 ~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~ 498 (583)
.....++..+.|..-++++.+.. +....|+++-++.
T Consensus 280 ~~~tIgpdKvNQLRHvrff~d~~--------------------------------------------gGv~aHM~kHa~i 315 (425)
T PF12897_consen 280 SVQTIGPDKVNQLRHVRFFKDAE--------------------------------------------GGVRAHMRKHAAI 315 (425)
T ss_dssp HHH-S---HHHHHHHHHHHHSHH--------------------------------------------THHHHHHHHHHHH
T ss_pred cCceeCccHHHHHHHHHHhcChh--------------------------------------------hHHHHHHHHHHHH
Confidence 77788888888888888877621 0123345555555
Q ss_pred HHHHHHHHHHHHHh-cC-CCCCcccccccccceeecCCChhhhhhhhhhhhHHHHHHHHhhcCCCccccccc
Q psy14428 499 ISSIREELKSKILD-KG-SKKNWDHITNQKGMFCYTGLSASQGMSNRISSIREELKSKILDKGSKKNWDHIT 568 (583)
Q Consensus 499 ~~~~r~~l~~~L~~-~~-~pg~~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (583)
++-+.+++.+.|++ ++ ..|--....|+||+|+..+..+..- -++.++..+-++.+...|.+.++..+.
T Consensus 316 l~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~A--krvV~lakeAGV~LT~AGAtfPyg~DP 385 (425)
T PF12897_consen 316 LRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGTA--KRVVELAKEAGVALTPAGATFPYGKDP 385 (425)
T ss_dssp HHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-H--HHHHHHHHHTTEE---TTTTSGGG--T
T ss_pred HhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCChH--HHHHHHHHHhCceeCCCCCCCCCCCCC
Confidence 66667777777765 33 1122356789999998866544322 234457788888888888888776654
No 127
>PLN02721 threonine aldolase
Probab=99.86 E-value=4.7e-20 Score=193.11 Aligned_cols=219 Identities=14% Similarity=0.073 Sum_probs=146.4
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
.+++|+.+.+. .+.+.+.+++...........|.|. ..+||++++++++.. .+++ +++|+++
T Consensus 6 ~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~--~~~l~~~la~~~~~~--------~~~~--~~~Gs~a 67 (353)
T PLN02721 6 RVVDLRSDTVT------KPTDAMRAAMANAEVDDDVLGYDPT--ALRLEEEMAKIFGKE--------AALF--VPSGTMG 67 (353)
T ss_pred hhhhhhccccc------CCCHHHHHHHHhccCCCcccCCCHH--HHHHHHHHHHHhCCc--------eeEE--ecCccHH
Confidence 45778877774 2567888887654112123334333 799999999999742 2345 5555555
Q ss_pred HHHHHHHHHHhCC-CCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC----CCCcEEEE
Q psy14428 244 LRVGTAFLERFYP-GVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM----PERSILFL 315 (583)
Q Consensus 244 l~l~~~~l~~~~~-~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~----~~~~~~i~ 315 (583)
..++ +..++. +||.|++++|+|..... .+...|++++.+|. ++ ++.+|++.+++.+.+. .+++++++
T Consensus 68 ~~~~---l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 68 NLIS---VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKN-NE-DGTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred HHHH---HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCC-Cc-CCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 5443 333444 79999999999753333 56778999999987 43 4678999999988532 14677777
Q ss_pred eCC-CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC--CCCCCchHHHHHHHHhcCcEEEEecCcccccccCc
Q psy14428 316 QTS-SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS--GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGE 392 (583)
Q Consensus 316 i~~-p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~--~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~Gl 392 (583)
+++ ||||||.+++.+++++|+++|+++|++||+|++|..... .+ . +...+....+ .++.|+||.++.
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~--~---~~~~~~~~~d--~~~~s~sK~l~~--- 212 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALG--V---PVHRLVKAAD--SVSVCLSKGLGA--- 212 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhC--C---CHHHHhhhCC--EEEEecccccCC---
Confidence 755 688999999999999999999999999999999753221 11 1 1112222223 334479998863
Q ss_pred cceEEEEEcCCchhHHHHHHHHHHHHhcc
Q psy14428 393 RVGTFSVLTPTSDETERIMSQLKILIRGF 421 (583)
Q Consensus 393 RiG~lv~~~p~~~~~~~li~~l~~~~~~~ 421 (583)
++||++.. + +++++.+...+...
T Consensus 213 ~~G~~~~~-~-----~~~~~~~~~~~~~~ 235 (353)
T PLN02721 213 PVGSVIVG-S-----KSFIRKAKRLRKTL 235 (353)
T ss_pred ceeeEEec-C-----HHHHHhHHHHHHhc
Confidence 47874431 4 47888877665443
No 128
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.86 E-value=1.2e-19 Score=193.06 Aligned_cols=217 Identities=11% Similarity=0.058 Sum_probs=158.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCC---CC----HHHHHHHHHHHhCCCCCCCCCCCeE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIG---GD----AKFCKLAAQLAYGEDFPAFKDNRLA 233 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~---G~----~~Lr~aia~~~~~~~g~~~~~~~I~ 233 (583)
.+.+.|+|+.+++. +.+ +++.+.++..+...+. ..+|+++. |. .+||+++|++++. ++++
T Consensus 36 ~g~~~i~~~~~~~l---g~~-~~~~v~~~~~~~~~~~-~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--------~~~i 102 (393)
T TIGR01822 36 DGREVLNFCANNYL---GLS-SHPDLIQAAKDALDEH-GFGMSSVRFICGTQDIHKELEAKIAAFLGT--------EDTI 102 (393)
T ss_pred CCceEEEeeCCCcc---ccC-CCHHHHHHHHHHHHHh-CCCCCCcCcccCChHHHHHHHHHHHHHhCC--------CcEE
Confidence 34578999999763 222 3467777776666542 24677777 86 8999999999974 4677
Q ss_pred EEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCC
Q psy14428 234 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PER 310 (583)
Q Consensus 234 i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~ 310 (583)
+ ++|+++|+..+ +..++.+||.|++++|+|+.+...++..+.+.+.++ ..|++.+++.+... ..+
T Consensus 103 i--~~~~~~a~~~~---~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~ 170 (393)
T TIGR01822 103 L--YASCFDANGGL---FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGAR 170 (393)
T ss_pred E--ECchHHHHHHH---HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCC
Confidence 7 88889998874 444567799999999999999998888887765432 34888898888643 127
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-cCcEEEEecCcccccc
Q psy14428 311 SILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGL 389 (583)
Q Consensus 311 ~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l 389 (583)
++++++++++||||.+.+ +++|+++|++||++||+||+|..-..+. ...+.....+. .+..++++||||.+
T Consensus 171 ~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~---~~~~~~~~~~~~~~~di~~~s~sK~l-- 242 (393)
T TIGR01822 171 HRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGP---TGRGSHELCGVMGRVDIITGTLGKAL-- 242 (393)
T ss_pred ceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCC---CCCchHHhcCCCCCCeEEEEEChHHh--
Confidence 888999999999999876 6777889999999999999995322221 11111122221 24569999999986
Q ss_pred cCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 390 YGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 390 ~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
+|+|+||+++ + +++++.+...
T Consensus 243 ~g~r~G~~~~--~-----~~~~~~l~~~ 263 (393)
T TIGR01822 243 GGASGGFTTA--R-----KEVVELLRQR 263 (393)
T ss_pred hCCCcEEEEe--C-----HHHHHHHHHh
Confidence 5789999998 7 5788888764
No 129
>KOG1412|consensus
Probab=99.85 E-value=3.3e-22 Score=192.20 Aligned_cols=76 Identities=34% Similarity=0.702 Sum_probs=72.7
Q ss_pred CcceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCC-ceeeeeccCCCCcccchhhhHHHHHhhh
Q psy14428 1 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRL-NVGAYRYFDNKTNGLDFAGMMEDIKLAI 77 (583)
Q Consensus 1 ~~~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~-~~~~y~~~~~~~~~~d~~~~~~~~~~a~ 77 (583)
+.+|||||||||||+||.||++||+. ++||+|+|||.||+.+|+++|+ .|.+|+|||.+++++|+++|+.||+.||
T Consensus 100 v~~vQslsGTGAl~~~A~Fl~~~~~~-~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~AP 176 (410)
T KOG1412|consen 100 VFGVQSLSGTGALRIAADFLATFYNK-NTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAP 176 (410)
T ss_pred ccceeeccccchhhhhHHHHHHhccc-ceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCC
Confidence 47899999999999999999999986 7899999999999999999995 7999999999999999999999999997
No 130
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=1e-19 Score=193.62 Aligned_cols=195 Identities=13% Similarity=0.105 Sum_probs=151.0
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-----hhc
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-----TDS 278 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-----~~~ 278 (583)
+..-..+|++.+|++.+. +.+++ ++||++|+.++ +..++.+||.|+++.|.|+.+...+ +..
T Consensus 74 ~~Pt~~~LE~~lA~l~g~--------~~~l~--~~sG~~Ai~~a---l~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~ 140 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGT--------EAAYC--TASGMSAISSV---LLQLCSSGGHVVASNTLYGGTHALLAHFLPRKC 140 (418)
T ss_pred CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH---HHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhcc
Confidence 355578899999998864 35667 99999999985 4445667999999999999887765 346
Q ss_pred CCeEEEEecccCCCCCCChhhHHHHHHcCCC-CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC
Q psy14428 279 RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE-RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS 357 (583)
Q Consensus 279 G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~-~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~ 357 (583)
|++++.++. .|++.+++.+ .+ +++++++++|+||||.+.+ +++|+++|++++++||+|++|.++.+
T Consensus 141 G~~~~~~d~-------~d~e~l~~~i---~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~ 207 (418)
T PLN02242 141 NITTTFVDI-------TDLEAVKKAV---VPGKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVL 207 (418)
T ss_pred CceEEEcCC-------CCHHHHHHhc---CcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCC
Confidence 777766654 1778887777 44 5899999999999999885 67788889999999999999987765
Q ss_pred CCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHHHh--ccccCCChHHHHHHH
Q psy14428 358 GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKILIR--GFYSNPPIHGARIVT 434 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~~~--~~~~~~s~~~q~~~~ 434 (583)
+. . ..+..|++.||||.++.+|+|+ ||+++ + +++++++..... ....+++...|.++.
T Consensus 208 ~~-------~-----~~g~divv~S~SK~l~g~g~~~gG~iv~--~-----~~li~~l~~~~~~~~~~~g~~~~~~~A~l 268 (418)
T PLN02242 208 SP-------A-----RLGADVVVHSISKFISGGADIIAGAVCG--P-----AELVNSMMDLHHGALMLLGPTMNPKVAFE 268 (418)
T ss_pred CH-------H-----HcCCcEEEEeCccccCCCCCceEEEEEc--C-----HHHHHHHHHHhhhhhhccCCCCCHHHHHH
Confidence 31 1 1246799999999999899885 88888 6 578888887655 245677777888888
Q ss_pred HHhCChhhh
Q psy14428 435 EILSDPKLK 443 (583)
Q Consensus 435 ~~l~~~~~~ 443 (583)
.+.....+.
T Consensus 269 ~~~~l~tl~ 277 (418)
T PLN02242 269 LSERLPHLS 277 (418)
T ss_pred HHcCCCcHH
Confidence 777654433
No 131
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.85 E-value=9.3e-19 Score=185.50 Aligned_cols=280 Identities=13% Similarity=0.058 Sum_probs=171.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-C-CCCCCCCCCCC----HHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-N-LDHEYANIGGD----AKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~----~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
.+.+.|||+.+.+ .|. .+++.+.+++.+.... . ....|....|. .++++++++++ + .++.|++
T Consensus 37 ~g~~~id~~~~~~---~g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~---~~~~i~~ 105 (385)
T PRK05958 37 DGRRMLNFASNDY---LGL-ARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWF----G---AERALLF 105 (385)
T ss_pred CCceEEEeeCCCc---ccC-CCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh----C---CCcEEEE
Confidence 4667889998753 121 1456788877766643 1 01123334454 45555555555 3 2445555
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEE
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
++| ++++..+ +..+..+||.|++++|+|+.+...++..|.+++.++. .|++.+++.++...+.+.++
T Consensus 106 --~~g-~~~~~~~---l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lv 172 (385)
T PRK05958 106 --SSG-YAANLAV---LTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALI 172 (385)
T ss_pred --CcH-HHHHHHH---HHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEE
Confidence 554 4555442 3456778999999999999999999999999888765 17788888875433346788
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi 394 (583)
++++++||||...+ +++|+++|+++|++||+||+|....++........... .+..+++|++.||||.++++|
T Consensus 173 i~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G--- 245 (385)
T PRK05958 173 VTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAG-LAGEPDVILVGTLGKALGSSG--- 245 (385)
T ss_pred EEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhC-CCCCCceEEEEechhhcccCC---
Confidence 88899999997765 67788899999999999999977655421011111111 123468999999999998777
Q ss_pred eEEEEEcCCchhHHHHHHHHHHHHhcc-c-cCCChHHHHHHHHHhCChh-hhhhhhhHHHHHHHHHHHHhh-ccCCCccc
Q psy14428 395 GTFSVLTPTSDETERIMSQLKILIRGF-Y-SNPPIHGARIVTEILSDPK-LKAQCDETERIMSQLKILIRG-FYSNPPIH 470 (583)
Q Consensus 395 G~lv~~~p~~~~~~~li~~l~~~~~~~-~-~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~l~~~~r~-~~~~~p~~ 470 (583)
||+++ + +++++.+.+..... . .+.+.+.+.++...++... .....++..+..+.+.+.++. .+...+..
T Consensus 246 g~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 318 (385)
T PRK05958 246 AAVLG--S-----ETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALGFQLMDSQ 318 (385)
T ss_pred cEEEc--C-----HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCCcCCCC
Confidence 99988 6 57787776543222 2 2344444444544443110 111222222222222222322 24444556
Q ss_pred hhhHHHHh
Q psy14428 471 GARIVTEI 478 (583)
Q Consensus 471 g~~i~~~~ 478 (583)
|.++++.+
T Consensus 319 ~~~~~~~~ 326 (385)
T PRK05958 319 SAIQPLIV 326 (385)
T ss_pred CCEEEEEe
Confidence 77666654
No 132
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=4e-19 Score=188.66 Aligned_cols=194 Identities=14% Similarity=0.119 Sum_probs=148.4
Q ss_pred CC--CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----H
Q psy14428 202 YA--NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----C 275 (583)
Q Consensus 202 Y~--~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~ 275 (583)
|. +..+..+|++++|++++. ++.++ ++||++|+..+ +..++++||+|++++|.|..+... +
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g~--------~~~l~--~~sG~~Ai~~a---l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~ 124 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEGG--------EAAVV--AASGMGAISSS---LWSALKAGDHVVASDTLYGCTFALLNHGL 124 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH---HHHHhCCCCEEEEecCccchHHHHHHHHH
Confidence 55 778899999999999863 35677 88888998774 344566799999999988776544 4
Q ss_pred hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccCC
Q psy14428 276 TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR--HLYPFFDMAYL 353 (583)
Q Consensus 276 ~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~--~i~iI~De~Y~ 353 (583)
+..|++++.++.. |++.+++.+ .++++++++++|+||||.+.+ +++|.++|+++ +++||+|++|.
T Consensus 125 ~~~G~~v~~vd~~-------d~e~l~~~i---~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~ 191 (400)
T PRK06234 125 TRYGVEVTFVDTS-------NLEEVRNAL---KANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFC 191 (400)
T ss_pred hhCCeEEEEECCC-------CHHHHHHHh---ccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCC
Confidence 6689999888651 678888877 567899999999999999988 56667778886 99999999998
Q ss_pred CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHH--HhccccCCChHHH
Q psy14428 354 GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKIL--IRGFYSNPPIHGA 430 (583)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~--~~~~~~~~s~~~q 430 (583)
...+.. ++ + .+..|++.|+||.++.+|+|+ ||+++ + ++++++++.. ......+.+++..
T Consensus 192 ~~~~~~------~l----~-~g~Divv~S~sK~l~g~g~~~gG~v~~--~-----~~~~~~l~~~~~~~~~g~~l~p~~a 253 (400)
T PRK06234 192 TPYIQR------PL----Q-LGADVVVHSATKYLNGHGDVIAGFVVG--K-----EEFINQVKLFGIKDMTGSVIGPFEA 253 (400)
T ss_pred chhcCC------ch----h-hCCcEEEeeccccccCCCCceeEEEEe--c-----HHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 765532 12 1 145699999999999899886 99988 6 4688877653 2233556677777
Q ss_pred HHHHHHhCC
Q psy14428 431 RIVTEILSD 439 (583)
Q Consensus 431 ~~~~~~l~~ 439 (583)
+.+..-++.
T Consensus 254 ~l~~~~l~t 262 (400)
T PRK06234 254 FLIIRGMKT 262 (400)
T ss_pred HHHHhccCc
Confidence 777666664
No 133
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.82 E-value=9.5e-19 Score=186.48 Aligned_cols=279 Identities=12% Similarity=0.078 Sum_probs=181.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|. ..+.+.+++.+.+++. ....|.+..+ .+|.+.++++ .+.. .+++|++ ++
T Consensus 41 dg~~~lD~~s~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~----~~~~-~~~~v~~--~~ 110 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGH--AHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVEL----LGAP-EGGRVFF--CN 110 (398)
T ss_pred CCCEEEECCcCHhhccCCC--CCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHh----CCCC-CCCEEEE--eC
Confidence 3556789998887766664 2477888877776541 1234654333 3455555444 3322 4579999 99
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-CC------------eEEEEecccCCCCCCChhhHHHHHH
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-RL------------NVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~------------~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
|+++|+..+..++.. ...+.|+..+++|..+....... |. ++..+|. .|++.+++.+
T Consensus 111 sgsea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~- 180 (398)
T PRK03244 111 SGAEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAV- 180 (398)
T ss_pred chHHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhh-
Confidence 999999997554433 22357777788998774433322 21 2222322 1677787766
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 306 AMPERSILFLQTSSHNPTGVDLSEDQ-WRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~~s~~~-~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
.++++++++.+++||||.++++++ +++|.++|+++|+++|+||+|.+|...+ ....+.. .+..+++ .+||
T Consensus 181 --~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g---~~~~~~~-~~~~pDi---~t~s 251 (398)
T PRK03244 181 --DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG---AWFAHQH-DGVTPDV---VTLA 251 (398)
T ss_pred --cCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc---hHHhhhh-hCCCCCE---EEEc
Confidence 357788888999999999997766 9999999999999999999999876654 1111111 1222333 4889
Q ss_pred ccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 385 KNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
|.++ +|+|+||+++ + +++++.+........++.++++|.++...++ ++.+.++..++... +++.++
T Consensus 252 K~l~-~G~~ig~~~~--~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~---l~~~L~ 320 (398)
T PRK03244 252 KGLG-GGLPIGACLA--F-----GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQ---LRAGIE 320 (398)
T ss_pred hhhh-CCcccEEEEE--c-----HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH---HHHHHH
Confidence 9999 9999999999 7 4788887655455566889999999998865 44444444443322 222222
Q ss_pred hc-c---CCCccchhhHHHHhc
Q psy14428 462 GF-Y---SNPPIHGARIVTEIL 479 (583)
Q Consensus 462 ~~-~---~~~p~~g~~i~~~~l 479 (583)
.. + ......|.+++..+.
T Consensus 321 ~~~~~~~~~v~g~g~~~~i~~~ 342 (398)
T PRK03244 321 ALGHPLVDHVRGRGLLLGIVLT 342 (398)
T ss_pred hcCCCceeeEeeccEEEEEEEe
Confidence 21 2 123345777776653
No 134
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.82 E-value=1.9e-18 Score=184.33 Aligned_cols=284 Identities=14% Similarity=0.115 Sum_probs=185.9
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhcc------CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK------NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~------~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
...++|..+... +++.+++++...+.. .....|....+.+.+++.+++++.+.+|.+ ..+|++
T Consensus 19 ~~~~~~~~~~~~-------~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~-- 87 (402)
T cd00378 19 RETLELIASENF-------TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQP-- 87 (402)
T ss_pred HhCeeeeccCCc-------CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeec--
Confidence 456777665542 457888887654321 113346667777888887776665555543 345555
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH-----HhhcCCeEEEEecccCC--CCCCChhhHHHHHHcCCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF-----CTDSRLNVGAYRYFDNK--TNGLDFAGMMEDIKAMPE 309 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~-----~~~~G~~~~~v~~~d~~--~~g~d~~~l~~~l~~~~~ 309 (583)
++ |++|+.++ +..+.++||+|++++|+|+.+... ++..|.+++.+++ +.+ ++.+|++.+++.+.. .
T Consensus 88 ~s-gt~a~~~~---l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~id~~~l~~~i~~--~ 160 (402)
T cd00378 88 HS-GSQANLAV---YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPY-GVDPETGLIDYDALEKMALE--F 160 (402)
T ss_pred CC-cHHHHHHH---HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecC-CcCcccCCcCHHHHHHHHHh--C
Confidence 54 56888874 455667899999999999876543 6667887777776 333 588999999988842 3
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccC-CCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 310 RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY-LGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y-~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
+++++++++|+||+. . ++++|+++|+++|++||+|++| .++.+.+. ...++. ... ++++|+||.+
T Consensus 161 ~~~~v~~~~~~~~~~--~---~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~--~~~~~~-----~~d-v~~~s~sK~l- 226 (402)
T cd00378 161 KPKLIVAGASAYPRP--I---DFKRFREIADEVGAYLLVDMAHVAGLVAGGV--FPNPLP-----GAD-VVTTTTHKTL- 226 (402)
T ss_pred CCCEEEecCcccCCC--c---CHHHHHHHHHhcCCEEEEEccchhhhhhccc--CCCccc-----CCc-EEEeccccCC-
Confidence 577888899998853 2 4778899999999999999994 66655431 111111 123 6899999977
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHH-HHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCC
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIV-TEILSDPKLKAQCDETERIMSQLKILIRGFYSNP 467 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~ 467 (583)
+|+|.||+++ ++ +++++++.+.......+.+...+.++ ...+..
T Consensus 227 -~G~~gg~i~~--~~----~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~---------------------------- 271 (402)
T cd00378 227 -RGPRGGLILT--RK----GELAKKINSAVFPGLQGGPHLHVIAAKAVALKE---------------------------- 271 (402)
T ss_pred -CCCCceEEEe--cc----HHHHHHHHHHhCccccCCchHHHHHHHHHHHHH----------------------------
Confidence 8999999999 64 36888877654433333332222111 111100
Q ss_pred ccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-cccccceeecCCCh
Q psy14428 468 PIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHI-TNQKGMFCYTGLSA 536 (583)
Q Consensus 468 p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~-~~~~g~f~~~~l~~ 536 (583)
.......+.++++.++++.+.+.|++.+ +... .++++++.|..++.
T Consensus 272 -------------------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~v~v~~~~ 318 (402)
T cd00378 272 -------------------ALEPEFKAYAKQVVENAKALAEALKERG----FKVVSGGTDNHLVLVDLRP 318 (402)
T ss_pred -------------------HhhHHHHHHHHHHHHHHHHHHHHHHhCC----CeEeecCCCCeEEEEeCCc
Confidence 0001234455667788888999988764 3333 35678999988864
No 135
>PLN02822 serine palmitoyltransferase
Probab=99.82 E-value=1.2e-18 Score=188.89 Aligned_cols=283 Identities=11% Similarity=0.053 Sum_probs=193.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CC-----CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NL-----DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
.+.+.+||+.+.+..- . .++.+.++..+.+++ +. ...|.+..+..+|+++||+++. .++.|++
T Consensus 107 ~G~~~id~~s~~~lgl---~-~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~ 175 (481)
T PLN02822 107 NGKDVVNFASANYLGL---I-GNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILY 175 (481)
T ss_pred CCceEEEeECCCcCCC---C-CCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEE
Confidence 3457799998876422 1 356778777777755 21 1246777779999999999996 2478888
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc---C---C
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA---M---P 308 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~---~---~ 308 (583)
++|++ ++.. ++..++.+||.|++....+..+...++..|.+++.++.. |.+.++..+++ . .
T Consensus 176 --s~G~~-a~~s---ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~ 242 (481)
T PLN02822 176 --SYGLS-TIFS---VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRK 242 (481)
T ss_pred --CCHHH-HHHH---HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhccc
Confidence 88877 4443 455677889999988777777777788889999988763 33344443332 1 1
Q ss_pred CCc-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH--hcCcEEEEecCcc
Q psy14428 309 ERS-ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK--EVGQLCLAQSFSK 385 (583)
Q Consensus 309 ~~~-~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~--~~~~vi~i~S~SK 385 (583)
+++ +++++..++|+||.+.+ +++|+++|++|++++|.||+|....++..... +....+ ..+..|+++||||
T Consensus 243 ~~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G---~~e~~~v~~~~~dii~~s~sK 316 (481)
T PLN02822 243 KKLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG---LSEHFGVPIEKIDIITAAMGH 316 (481)
T ss_pred CCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCC---hHHHcCCCCCCCeEEEecchh
Confidence 233 78999999999999999 67889999999999999999997766531011 111111 1245689999999
Q ss_pred cccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCC--ChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc
Q psy14428 386 NMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNP--PIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF 463 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~ 463 (583)
.+|++| ||+++ + +++++.++.......++. |+..|.++...++.-
T Consensus 317 alg~~G---G~i~g--~-----~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l----------------------- 363 (481)
T PLN02822 317 ALATEG---GFCTG--S-----ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL----------------------- 363 (481)
T ss_pred hhhhCC---eEEEc--C-----HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHH-----------------------
Confidence 999999 99998 6 578888876544444443 355666665555210
Q ss_pred cCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 464 YSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 464 ~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
+...+++++++++++.|.+.|++.. | +....+.++.+.+..++
T Consensus 364 --------------------------~~~~~~~~~l~~~~~~l~~~L~~~~--g-~~~~~~~~spi~~l~l~ 406 (481)
T PLN02822 364 --------------------------EDNPSVLAKLKENIALLHKGLSDIP--G-LSIGSNTLSPIVFLHLE 406 (481)
T ss_pred --------------------------HhCHHHHHHHHHHHHHHHHHHHhcC--C-cccCCCCCCCEEEEEeC
Confidence 0012344566778888888887742 2 44555667788777664
No 136
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=3.2e-18 Score=179.92 Aligned_cols=191 Identities=12% Similarity=0.105 Sum_probs=141.2
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh----HHHHhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH----VRFCTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G 279 (583)
+..-..+|++++|++.+.. ..++ ++||++++.++ +. +..+||+|++++|+|+.. ...++..|
T Consensus 50 ~~pt~~~le~~la~l~g~~--------~~~~--~~sG~~ai~~~---~~-ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 115 (366)
T PRK08247 50 GNPTRGVLEQAIADLEGGD--------QGFA--CSSGMAAIQLV---MS-LFRSGDELIVSSDLYGGTYRLFEEHWKKWN 115 (366)
T ss_pred CCchHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH---HH-HhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence 3345689999999998642 2355 77888898864 33 445699999999999874 34455689
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. .|++.+++.+ .++++++++++|+|||| +..++++|+++|++++++||+|++|..-....
T Consensus 116 ~~v~~vd~-------~d~~~l~~~i---~~~tklv~le~P~NP~~---~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~ 182 (366)
T PRK08247 116 VRFVYVNT-------ASLKAIEQAI---TPNTKAIFIETPTNPLM---QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR 182 (366)
T ss_pred ceEEEECC-------CCHHHHHHhc---ccCceEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCccccccC
Confidence 99888765 1778888777 56789999999999975 67889999999999999999999995332221
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccc-cCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGL-YGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l-~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ ..+..|++.|+||.++- ++++.||+++ ++ +++++++...+.....+.+.+.|+++...++
T Consensus 183 ------p~-----~~g~di~i~S~sK~~~g~~d~~~G~iv~--~~----~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~ 245 (366)
T PRK08247 183 ------PL-----EEGADIVIHSATKYLGGHNDVLAGLVVA--KG----QELCERLAYYQNAAGAVLSPFDSWLLIRGMK 245 (366)
T ss_pred ------ch-----hcCCcEEEeecceeccCCCceeeeEEec--Ch----HHHHHHHHHHHHhcCCCCChHHHHHHHhccC
Confidence 11 12567999999999964 3579999998 64 3677877776666555666666666555443
No 137
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.81 E-value=1.1e-17 Score=176.55 Aligned_cols=178 Identities=15% Similarity=0.039 Sum_probs=136.0
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEec
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 287 (583)
...+++++|++++. +.+++ ++|+++++..+ +..+.++||.|+++.+.+......++..|++++.+|.
T Consensus 53 ~~~~~e~lA~~~g~--------~~~~i--~~g~~~a~~~~---~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~ 119 (370)
T TIGR02539 53 IHDFLEDLAEFLGM--------DEARV--THGAREGKFAV---MHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPH 119 (370)
T ss_pred HHHHHHHHHHHhCC--------CceEE--ECChHHHHHHH---HHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEec
Confidence 46788889998863 35677 89999999885 4456677999999888844444677889999999998
Q ss_pred ccCCCCCCChhhHHHHHHcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 288 FDNKTNGLDFAGMMEDIKAMP----ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 288 ~d~~~~g~d~~~l~~~l~~~~----~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.++.++.+|++.+++.+.+.. ++++++++++|+||||...+ +++|+++|+++++++|+||+|.....+.
T Consensus 120 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~~---- 192 (370)
T TIGR02539 120 TGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMPV---- 192 (370)
T ss_pred CCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcCC----
Confidence 322357889999999885421 36789999999999998776 5566788999999999999998753221
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHh
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIR 419 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~ 419 (583)
.... .+..++++||||.++ +|.|+||+++ + +++++.+.....
T Consensus 193 --~~~~----~~~di~v~s~sK~~~-~~g~~G~l~~--~-----~~~i~~l~~~~~ 234 (370)
T TIGR02539 193 --SAKE----IGADFIVGSGHKSMA-ASGPCGVLGM--S-----EEWEDIVLRKSR 234 (370)
T ss_pred --CHHH----cCCCEEEeeCccccc-CCCCEEEEEE--C-----HHHHhhhccccc
Confidence 1111 134467799999998 6889999999 6 578888887654
No 138
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.81 E-value=7.7e-18 Score=176.05 Aligned_cols=198 Identities=14% Similarity=0.058 Sum_probs=135.5
Q ss_pred hHHHHHHHHHhccCC--CCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCC
Q psy14428 184 PSVKEAERRIYEKNL--DHEYAN----IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG 257 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~--~~~Y~~----~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~ 257 (583)
+.+.+++++.+++.. ...|.. ..-..+++++++++++. ++.| + ++++++++..+ +..++++
T Consensus 18 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~~i-v--~~sg~~a~~~~---~~~~~~~ 84 (349)
T cd06454 18 PEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK-------EAAL-V--FSSGYAANDGV---LSTLAGK 84 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC-------CCEE-E--eccHHHHHHHH---HHHhcCC
Confidence 678888877775421 112222 22336677777776642 2344 4 44456676653 3455677
Q ss_pred CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q psy14428 258 VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--PERSILFLQTSSHNPTGVDLSEDQWRQL 335 (583)
Q Consensus 258 gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~s~~~~~~l 335 (583)
||.|++++|+|+.+...++..|++++.++. +|++.+++.+.+. ..+++++++++++||||...+ +++|
T Consensus 85 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i 154 (349)
T cd06454 85 GDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LPEL 154 (349)
T ss_pred CCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC---HHHH
Confidence 999999999999998888999999887754 2667777777543 256788999999999998766 5777
Q ss_pred HHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH-HHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 336 AVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF-AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 336 ~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~-~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
+++|+++++++|+|++|....++.. .. .+..+ .+..+.+++++|+||.++++| ||+++ + +++++.+
T Consensus 155 ~~~~~~~~~~livD~a~~~g~~~~~-~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~--~-----~~~~~~~ 221 (349)
T cd06454 155 VDLAKKYGAILFVDEAHSVGVYGPH-GR--GVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAG--S-----KELIDYL 221 (349)
T ss_pred HHHHHHcCCEEEEEccccccccCCC-CC--ChhhhccccccCcEEEeechhhhcccC---CEEEC--C-----HHHHHHH
Confidence 8899999999999999975333210 01 11111 123467899999999998655 99988 5 4677776
Q ss_pred HHH
Q psy14428 415 KIL 417 (583)
Q Consensus 415 ~~~ 417 (583)
...
T Consensus 222 ~~~ 224 (349)
T cd06454 222 RSY 224 (349)
T ss_pred HHh
Confidence 654
No 139
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.81 E-value=4.8e-18 Score=180.46 Aligned_cols=263 Identities=13% Similarity=0.090 Sum_probs=174.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|. -.+.+.+++.+.++.. ..... ....+....+++.+.+.. ..+++++ ++||
T Consensus 29 dG~~~lD~~~g~~~~~lGh--~~p~v~~a~~~~~~~~--~~~~~-~~~~~~~~~la~~l~~~~----~~~~v~~--~~sG 97 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGH--AHPHLVEALKEQAEKL--WHVSN-LYRIPEQERLAERLVENS----FADKVFF--TNSG 97 (389)
T ss_pred CCCEEEECCccHhhccCCC--CCHHHHHHHHHHHHhc--Ccccc-ccCChHHHHHHHHHHhhC----CCCEEEE--cCCc
Confidence 3456788888776655665 3467777777666431 11111 112234445555554422 2468999 9999
Q ss_pred hhHHHHHHHHHHHh-CCCCC----EEEEcCCCChhhHHHHhhcCCeEEEEeccc--CCCCC----CChhhHHHHHHcCCC
Q psy14428 241 SGSLRVGTAFLERF-YPGVK----TVYFPTPTWNGHVRFCTDSRLNVGAYRYFD--NKTNG----LDFAGMMEDIKAMPE 309 (583)
Q Consensus 241 ~~al~l~~~~l~~~-~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d--~~~~g----~d~~~l~~~l~~~~~ 309 (583)
++|++.+..+++.. ..+|| +|++.+++|..+.......+......+... .+++. .|++.+++.+ .+
T Consensus 98 seA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l---~~ 174 (389)
T PRK01278 98 AEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAI---TP 174 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhh---CC
Confidence 99999875555433 23465 899999999988766655544322211100 01111 3788888777 45
Q ss_pred CcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 310 RSILFLQTSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
+++++++..+|||+| .+++.+.+++|.++|++||+++|+||+|.+|.+.+. ..+...+ +.... +.||||.++
T Consensus 175 ~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~~-~~~pd---i~t~sK~l~ 247 (389)
T PRK01278 175 NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK---LFAHEWA-GVTPD---IMAVAKGIG 247 (389)
T ss_pred CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---ceeeccc-CCCCC---EEEEehhcc
Confidence 778888888888998 889999999999999999999999999998876541 1111111 11122 458999998
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhHHHH
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDETERI 452 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~ 452 (583)
+|+|+||+++ + +++++.+........++.+++.|.++...++ ++.+.++..+..+.
T Consensus 248 -~G~~ig~~~~--~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~ 306 (389)
T PRK01278 248 -GGFPLGACLA--T-----EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLY 306 (389)
T ss_pred -CCcceEEEEE--c-----HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 9999999999 7 4788888766666677889999998866554 44454544444433
No 140
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.81 E-value=5.1e-18 Score=182.07 Aligned_cols=294 Identities=12% Similarity=0.084 Sum_probs=192.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|. ..+.+.+++.+.+++. .+.+.+..+.+.. .++|+++....+.... +++++ +++|
T Consensus 39 dG~~~lD~~~g~~~~~lGh--~~~~i~~a~~~~~~~~-~~~~~~~~~~~~~-~~la~~l~~~~~~~~~-~~~~f--~~sG 111 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGH--LHPKVVAAVEAQLKKL-SHTCFQVLAYEPY-LELCEKMNQKVPGDFA-KKTLL--VTTG 111 (425)
T ss_pred CCCEEEEcCCchhhcCCCC--CCHHHHHHHHHHHhhC-CCccccccCCHHH-HHHHHHHHHhCCCCCC-CEEEE--eCCc
Confidence 4456788887777655554 3467777777766542 1223233334443 4777777664443332 35555 5555
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEE----------------EEecccCCCCCCC----hhhH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG----------------AYRYFDNKTNGLD----FAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~----------------~v~~~d~~~~g~d----~~~l 300 (583)
++|.+.+..+.+.+.. ...|+..+|+|.+....+...+.... .+|. +. .+.+ ++.+
T Consensus 112 sea~e~Alklar~~~~-r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~--~~~~~~~~~~~l 187 (425)
T PRK08088 112 SEAVENAVKIARAATK-RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC-PL--HGVSEDDAIASI 187 (425)
T ss_pred HHHHHHHHHHHHHHhC-CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCc-cc--cCccHHHHHHHH
Confidence 5777766555555555 45566679999888655555433211 1222 11 1222 4457
Q ss_pred HHHHHc--C-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE
Q psy14428 301 MEDIKA--M-PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL 377 (583)
Q Consensus 301 ~~~l~~--~-~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v 377 (583)
++.++. . .....+++-|..+||.....+++.+++|+++|++++++||+||+|.++.+.+ ...++ +..+.+
T Consensus 188 ~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g---~~~~~----~~~~~~ 260 (425)
T PRK08088 188 ERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG---TLFAM----EQMGVA 260 (425)
T ss_pred HHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhHH----hhcCCC
Confidence 776642 1 2334556667889998889999999999999999999999999999876544 12122 123456
Q ss_pred EEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHH
Q psy14428 378 CLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLK 457 (583)
Q Consensus 378 i~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~ 457 (583)
..+.||||.++ +|+|+||+++ + +++++.+........++.+++.|.++..+++....++++++++...+.++
T Consensus 261 pdi~s~sK~l~-~G~rig~v~~--~-----~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 332 (425)
T PRK08088 261 ADLTTFAKSIA-GGFPLAGVTG--R-----AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLK 332 (425)
T ss_pred CCEEEEecccc-CCCcceeeEe--c-----HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 67899999998 9999999999 7 58899888777777788999999999999987666667766666555554
Q ss_pred HHHhhcc---C---CCccchhhHHHHhcC
Q psy14428 458 ILIRGFY---S---NPPIHGARIVTEILS 480 (583)
Q Consensus 458 ~~~r~~~---~---~~p~~g~~i~~~~l~ 480 (583)
..++... . .+...|.++|+.+..
T Consensus 333 ~~l~~l~~~~~~~~~v~g~G~~~~l~l~~ 361 (425)
T PRK08088 333 DGLLAIAEKHPEIGDVRGLGAMIAIELFE 361 (425)
T ss_pred HHHHHHHHhCCCeEEEeccceEEEEEEec
Confidence 4443221 1 111227888888754
No 141
>PLN02483 serine palmitoyltransferase
Probab=99.81 E-value=4.4e-18 Score=184.86 Aligned_cols=223 Identities=14% Similarity=0.141 Sum_probs=151.3
Q ss_pred CCCccccCCccccCCCCC--CCCChHHHHHHHHHhcc--CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 162 HPKKMNLGVGAYRGEDGK--PYVLPSVKEAERRIYEK--NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~--p~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
....+||+.-++-. +.. +.+.+.+.+++.+.... .....|+...+..+|++++|++++. ++.|++ +
T Consensus 99 ~~~~~n~~s~~YLg-l~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-------~~ai~~--~ 168 (489)
T PLN02483 99 TRRCLNLGSYNYLG-FAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-------PAAIVF--G 168 (489)
T ss_pred CceEEEeecCCccC-cCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-------CcEEEE--C
Confidence 34567877655532 121 22345667766665422 2234588888999999999999973 467887 7
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC----CCC---
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM----PER--- 310 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~----~~~--- 310 (583)
+|....+ . ++..++.+||.|++++|+|..+...++..|++++.++.. |.+.+++.+++. .++
T Consensus 169 ~G~~an~-~---~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~ 237 (489)
T PLN02483 169 MGYATNS-T---IIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHR 237 (489)
T ss_pred CHHHHHH-H---HHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhcccccccc
Confidence 7754433 2 334467779999999999999999999999999998762 445555555421 122
Q ss_pred --cE-EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc
Q psy14428 311 --SI-LFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387 (583)
Q Consensus 311 --~~-~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 387 (583)
.+ ++++....|++|.+. ++++|+++|++++++||+||+|.....+............ +..+.+|+++||||+|
T Consensus 238 p~~k~livve~v~s~~G~~~---~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v-~~~~~dI~~~SfSKs~ 313 (489)
T PLN02483 238 PWKKIIVIVEGIYSMEGELC---KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGV-DPADVDIMMGTFTKSF 313 (489)
T ss_pred CCceEEEEECCCCCCCCccc---CHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCC-CcccCcEEEEecchhc
Confidence 24 444444558888776 4777788999999999999999754333110111122111 2245789999999999
Q ss_pred cccCccceEEEEEcCCchhHHHHHHHHHHHHh
Q psy14428 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIR 419 (583)
Q Consensus 388 ~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~ 419 (583)
|++| ||+++ + +++++.+.....
T Consensus 314 g~~G---G~i~~--~-----~~li~~l~~~~~ 335 (489)
T PLN02483 314 GSCG---GYIAG--S-----KELIQYLKRTCP 335 (489)
T ss_pred ccCc---eEEEc--C-----HHHHHHHHHhCc
Confidence 9877 99998 6 589999887643
No 142
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.81 E-value=2.8e-18 Score=180.89 Aligned_cols=210 Identities=12% Similarity=0.111 Sum_probs=152.6
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-c---C
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-S---R 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~---G 279 (583)
+..-...|++++|++.+ .+++++ |+|+++|+.++ +..++.+||.|+++.|+|......+.. . |
T Consensus 49 ~~p~~~~le~~lA~l~g--------~~~v~~--~~gg~~Ai~~~---l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 49 GNPTRDLLQQALAELEG--------GAGAVV--TNTGMSAIHLV---TTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred CCchHHHHHHHHHHHhC--------CCcEEE--EcCHHHHHHHH---HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 44456889999999885 257888 99999999985 444567799999999999975554433 2 3
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
+++..+ + ..|++.+++++ .++++++++++|+||||.+++. ++|+++|++++++||+|++|.......
T Consensus 116 ~~v~~~---d----~~d~~~l~~ai---~~~tklV~l~~p~NPtG~~~dl---~~I~~la~~~g~~vvvD~a~~~~~~~~ 182 (382)
T TIGR02080 116 FRVLFV---D----QGDEQALRAAL---AQKPKLVLIETPSNPLLRVVDI---AKICHLAKAVGAVVVVDNTFLSPALQN 182 (382)
T ss_pred eEEEEE---C----CCCHHHHHHhc---CcCceEEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCcccccCC
Confidence 444333 2 12778888877 5678999999999999999985 466778899999999999997664322
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++. + +-.++++|+||.++ .+|+|.|++++ .+ +++++++.........+.+++.++.+..-++
T Consensus 183 ------pl~-~----gaDivv~S~sK~l~G~~~~~~G~i~~--~~----~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~ 245 (382)
T TIGR02080 183 ------PLA-L----GADLVLHSCTKYLNGHSDVIAGAVIA--KD----PQVAEELAWWANNLGVTGGAFDSYLTLRGLR 245 (382)
T ss_pred ------chh-h----CCCEEEeecceeccCCCCceeEEEEe--CC----HHHHHHHHHHHHccCCCCCHHHHHHHHcccc
Confidence 121 1 22488899999885 57899999988 54 4788888887777788889998888876665
Q ss_pred C--hhhhhhhhhHHHHHHHH
Q psy14428 439 D--PKLKAQCDETERIMSQL 456 (583)
Q Consensus 439 ~--~~~~~~~~~~~~~~~~l 456 (583)
. ..++++.++...+.+.+
T Consensus 246 tl~~R~~~~~~na~~~a~~L 265 (382)
T TIGR02080 246 TLVARMRLQQRNAQAIVEYL 265 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 3 23344443333333333
No 143
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.81 E-value=4.5e-18 Score=182.10 Aligned_cols=294 Identities=14% Similarity=0.088 Sum_probs=184.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...||+..|.+....|. ..+.+.+++.+.+.. ...|....|..++...+++.+.+..+. ..++|++ ++|++
T Consensus 35 G~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~--~~sgs 106 (413)
T cd00610 35 GNRYLDFLSGIGVLNLGH--NHPEVVEALKEQLAK--LTHFSLGFFYNEPAVELAELLLALTPE--GLDKVFF--VNSGT 106 (413)
T ss_pred CCEEEEcCccHHhhccCC--CCHHHHHHHHHHHHh--CcCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEE--cCcHH
Confidence 456788887755444453 346777777666643 234544445566666666666665543 5789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-------------CCeEEEEecccC-----CCCCCChhhHHHH
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-------------RLNVGAYRYFDN-----KTNGLDFAGMMED 303 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-------------G~~~~~v~~~d~-----~~~g~d~~~l~~~ 303 (583)
+|+..+..+++...+ ++.|++.+|+|.......... +.+++.+|. ++ +++..|++.+++.
T Consensus 107 ea~~~al~~~~~~~~-~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~ 184 (413)
T cd00610 107 EAVEAALKLARAYTG-RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPY-PYRYRPPAELADDLEALEEA 184 (413)
T ss_pred HHHHHHHHHHHHHcC-CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCC-CccccchhhHHHHHHHHHHH
Confidence 999987555444444 899999999998865443332 223556665 21 1133478888888
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEec
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQS 382 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S 382 (583)
+++...+.+++++...+|++|.++ +++.+++|.++|+++++++|+||+|.++...+ ....... .+...-+.|
T Consensus 185 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g---~~~~~~~----~~~~~d~~t 257 (413)
T cd00610 185 LEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG---KMFAFEH----FGVEPDIVT 257 (413)
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhhHhh----cCCCCCeEE
Confidence 854334556666655666779876 77889999999999999999999999875433 1111111 112223568
Q ss_pred CcccccccCccceEEEEEcCCchhHHHHHHHH--HHHHhccccCCChHHHHHHHHHh---CChhhhhhhhhHHHHHH-HH
Q psy14428 383 FSKNMGLYGERVGTFSVLTPTSDETERIMSQL--KILIRGFYSNPPIHGARIVTEIL---SDPKLKAQCDETERIMS-QL 456 (583)
Q Consensus 383 ~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l--~~~~~~~~~~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~-~l 456 (583)
|||.++ .|+|+||+++ + +++++.+ .........+.+++.|.++.+.+ +++.+.+++..+...+. .+
T Consensus 258 ~sK~l~-~g~~~g~~~~--~-----~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l 329 (413)
T cd00610 258 LGKGLG-GGLPLGAVLG--R-----EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERL 329 (413)
T ss_pred Eccccc-CccccEEEEE--c-----HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 999999 5899999998 6 5788886 33333345677888888776555 33344444444333322 22
Q ss_pred HHHHh--hccCCCccchhhHHHHhcC
Q psy14428 457 KILIR--GFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 457 ~~~~r--~~~~~~p~~g~~i~~~~l~ 480 (583)
+.+.. ......+..|.++++.+..
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (413)
T cd00610 330 RELAEKHPLVGDVRGRGLMIGIELVK 355 (413)
T ss_pred HHHHhhCCcEEEeecCceEEEEEEec
Confidence 22221 1111223456666665543
No 144
>PRK06460 hypothetical protein; Provisional
Probab=99.80 E-value=3.5e-18 Score=180.00 Aligned_cols=182 Identities=14% Similarity=0.073 Sum_probs=130.4
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC----ChhhHHHHhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT----WNGHVRFCTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~----y~~~~~~~~~~G 279 (583)
......+|++++|++.+.. ..+++ ++ |++++..+ +..++++||+|++++|. |..+...++..|
T Consensus 43 ~~p~~~~L~~~lA~l~g~~-------~~v~~--~s-G~~ai~~~---l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G 109 (376)
T PRK06460 43 ANPTVLELTKKIVELENAE-------MGVAF--SS-GMGAISTT---ALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWG 109 (376)
T ss_pred CCccHHHHHHHHHHHhCCC-------cEEEe--CC-HHHHHHHH---HHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhC
Confidence 3556789999999998642 24444 44 46788774 44566779999999764 555667788889
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
+++..++. +. .+.+++.+ .++++++++++||||||.+++.++ |+++|+++|++||+||+|......
T Consensus 110 ~~v~~~~~-~~------~~~l~~~~---~~~tklV~l~sp~NPtG~v~d~~~---I~~la~~~g~~vivDea~~~~~~~- 175 (376)
T PRK06460 110 VNVDASNP-GS------DNIIEKAK---SKRYDVVFVENITNPLLRVVDITE---LSKVCKENGSILIVDATFSTPINQ- 175 (376)
T ss_pred cEEEEECC-CC------HHHHHHhc---CCCceEEEEECCCCCCCcccCHHH---HHHHHHHcCCEEEEECCcCccccC-
Confidence 99888776 22 12233322 467899999999999999999764 678889999999999999754211
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCccccccc-CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHH
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY-GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHG 429 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~-GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~ 429 (583)
.++ + .+..+++.|+||.++-. |.|+||+++ + +++++++.+.......+.++..
T Consensus 176 -----~~l----~-~~~divv~S~sK~l~G~~~~~~G~~~~--~-----~~l~~~l~~~~~~~g~~~~~~~ 229 (376)
T PRK06460 176 -----KPL----E-LGADIVVHSASKFLAGHNDVIAGLAAG--Y-----GKLLNVIDQMRRTLGTSLDPHA 229 (376)
T ss_pred -----Chh----h-cCCCEEEeecceeccCCCCceEEEEec--C-----HHHHHHHHHHHHhcCCCCCHHH
Confidence 111 1 24579999999998522 368999998 6 5788888877666655555543
No 145
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.80 E-value=6.8e-18 Score=179.88 Aligned_cols=200 Identities=11% Similarity=0.014 Sum_probs=145.7
Q ss_pred CChHHHHHHHHHhccC-CCCCCCCC-------CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKN-LDHEYANI-------GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~-~~~~Y~~~-------~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~ 253 (583)
+++.+.+++.+..... ....+.+. ..+.++|++++++++.. ++++|++ |+|+++++.++...+..
T Consensus 28 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~--t~g~t~~l~~~~~~~~~ 100 (398)
T TIGR03392 28 KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAP-----DAENIVW--TRGTTESINLVAQSYAR 100 (398)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCChHHHHHHHHHHhhh
Confidence 5577888877766431 11112222 23467999999998632 4689999 99999999986433211
Q ss_pred -hCCCCCEEEEcCCCChh----hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 254 -FYPGVKTVYFPTPTWNG----HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 254 -~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
..++||+|++++|.|+. +...++..|++++.+|+ +. ++.+|++.+++.+ .++++++++++||||||.+++
T Consensus 101 ~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~-~~~~~~~~l~~~i---~~~t~lv~i~~~~n~tG~~~~ 175 (398)
T TIGR03392 101 PRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPI-GA-DLLPDIRQLPELL---TPRTRILALGQMSNVTGGCPD 175 (398)
T ss_pred ccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEec-CC-CCCcCHHHHHHHh---ccCceEEEEECccccccccCC
Confidence 13569999999999865 45567888999999998 54 3568999998887 567899999999999999987
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
. ++|+++|+++|+++|+|++|......- .+.. .+-.+++.|++|.+|.+| +||+++ + +
T Consensus 176 ~---~~i~~~~~~~~~~~ivD~a~~~~~~~~------~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~--~-----~ 233 (398)
T TIGR03392 176 L---ARAITLAHQYGAVVVVDGAQGVVHGPP------DVQA----LDIDFYAFSGHKLYGPTG--IGVLYG--K-----T 233 (398)
T ss_pred H---HHHHHHHHHcCCEEEEEhhhhcCCCCC------Chhh----cCCCEEEEecccccCCCc--eEEEEE--c-----H
Confidence 4 567888999999999999996543321 1221 233467888889998666 899998 6 4
Q ss_pred HHHHHHH
Q psy14428 409 RIMSQLK 415 (583)
Q Consensus 409 ~li~~l~ 415 (583)
++++++.
T Consensus 234 ~~~~~~~ 240 (398)
T TIGR03392 234 ELLEAMP 240 (398)
T ss_pred HHHhhCC
Confidence 6776654
No 146
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.80 E-value=6.3e-18 Score=178.95 Aligned_cols=189 Identities=14% Similarity=0.099 Sum_probs=140.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH----HHhhcCCeE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR----FCTDSRLNV 282 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~ 282 (583)
-..+|++.+|++++. +++++ |+||++|+.++ +..+.++||+|+++++.|..... .++..|+++
T Consensus 62 ~~~~le~~la~l~g~--------~~~v~--~ssG~~Ai~~a---l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v 128 (390)
T PRK08133 62 TVTMFQERLAALEGA--------EACVA--TASGMAAILAV---VMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIET 128 (390)
T ss_pred HHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEE
Confidence 357888999998753 45777 99999999875 33456679999999998876544 456789999
Q ss_pred EEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC
Q psy14428 283 GAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 283 ~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~ 362 (583)
+.+++ + |++.+++.+ .++++++++++|+||||.+.+ +++|+++|++++++||+|++|.......
T Consensus 129 ~~vd~-~------d~~~l~~~i---~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~--- 192 (390)
T PRK08133 129 TFVDL-T------DLDAWRAAV---RPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ--- 192 (390)
T ss_pred EEECC-C------CHHHHHHhc---CcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 98876 2 677787776 568899999999999999986 5677888999999999999986554321
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ . .+..+++.|+||.++.+|.|+|++++. + +++++++....+......+.+.++++..-++
T Consensus 193 ---pl----~-~g~Divv~S~sK~~~g~g~~~GG~vv~-~-----~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~ 254 (390)
T PRK08133 193 ---PL----K-LGADVVIHSATKYLDGQGRVLGGAVVG-S-----KELMEEVFGFLRTAGPTLSPFNAWVFLKGLE 254 (390)
T ss_pred ---ch----h-hCCcEEEeecceeecCCcceEeEEEEc-C-----HHHHHHHHHHHHHhCCCCCHHHHHHHHcccc
Confidence 12 1 123578999999999899999554441 4 3667777766666666667776666555444
No 147
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.79 E-value=3.8e-17 Score=174.79 Aligned_cols=238 Identities=13% Similarity=0.078 Sum_probs=154.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccC-C----C-CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-L----D-HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~----~-~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
..++++..++. .++ +.+.+.+++.+..... . . ..|....-..+|++++|++++. ++.|++ +
T Consensus 47 ~~~~~~sn~yl-~l~---~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-------~~~i~~--~ 113 (410)
T PRK13392 47 RVTIWCSNDYL-GMG---QHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-------ESALLF--T 113 (410)
T ss_pred eEEEEECCCcc-CCC---CCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-------CCEEEE--C
Confidence 45666665442 122 4567787776665431 0 0 1132222467899999998852 467887 8
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-CCCcEEEEe
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-PERSILFLQ 316 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-~~~~~~i~i 316 (583)
+|+ ++...+...+.. ..+||.|+++.+.+..+...++..|+++..++. . |++.+++.+++. .++++++++
T Consensus 114 sG~-~a~~~~i~~l~~-~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~--~-----d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 114 SGY-VSNDAALSTLGK-LLPGCVILSDALNHASMIEGIRRSGAEKQVFRH--N-----DLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred cHH-HHHHHHHHHHhc-CCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC--C-----CHHHHHHHHHhccCCCCEEEEE
Confidence 775 444432111211 235898888777777777777888988766643 1 555666666543 357899999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCc-EEEEecCcccccccCccce
Q psy14428 317 TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQ-LCLAQSFSKNMGLYGERVG 395 (583)
Q Consensus 317 ~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~l~GlRiG 395 (583)
++|+||||.+++ +++|.++|+++++++|+||+|....++.. . ..+....+..++ .++++||||.||++| |
T Consensus 185 ~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~--g-~g~~~~~~~~~~~div~~tlsK~~g~~G---G 255 (410)
T PRK13392 185 ESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGAR--G-GGIAERDGLMDRIDMIQGTLAKAFGCLG---G 255 (410)
T ss_pred eCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCC--C-CchhhhccCCCCCcEEEEEChHhhhccc---c
Confidence 999999999998 66778889999999999999984433321 1 111111121223 388999999999999 9
Q ss_pred EEEEEcCCchhHHHHHHHHHHHHhcc--ccCCChHHHHHHHHHhCC
Q psy14428 396 TFSVLTPTSDETERIMSQLKILIRGF--YSNPPIHGARIVTEILSD 439 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~~l~~~~~~~--~~~~s~~~q~~~~~~l~~ 439 (583)
|+++ + +++++.+++..... ..+.+++.|.++...++.
T Consensus 256 ~~~~--~-----~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~ 294 (410)
T PRK13392 256 YIAA--S-----ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRH 294 (410)
T ss_pred hhhc--C-----HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHH
Confidence 9988 6 57888888765432 334455778777777753
No 148
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=1e-17 Score=176.80 Aligned_cols=210 Identities=13% Similarity=0.118 Sum_probs=154.7
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G 279 (583)
+......|++++|++.+. +.+++ ++|+++++.++ +..++.+||+|++++|+|+.....+.. .|
T Consensus 50 ~~pt~~~L~~~lA~l~g~--------~~~i~--~~sg~~Ai~~~---l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 50 GNPTRDVVQRALAELEGG--------AGAVL--TNTGMSAIHLV---TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred CCccHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH---HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 444578999999998752 35888 99999999985 445667799999999999964443332 33
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
.++..++ ..|++.+++.+ .++++++++++|+||||.+++. ++|.++|++++++||+|++|.......
T Consensus 117 i~v~~vd-------~~d~e~l~~~l---~~~tklV~l~sP~NPtG~v~di---~~I~~ia~~~g~~vivDeay~~~~~~~ 183 (386)
T PRK08045 117 YRVLFVD-------QGDEQALRAAL---AEKPKLVLVESPSNPLLRVVDI---AKICHLAREAGAVSVVDNTFLSPALQN 183 (386)
T ss_pred eEEEEeC-------CCCHHHHHHhc---ccCCeEEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCCccccCC
Confidence 4554442 23778887776 5678999999999999999985 566777889999999999997654321
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++.. . --+++.|+||.++ .++++.|++++ .+ +++++++.........+.+++.++++...++
T Consensus 184 ------pl~~----g-aDivv~S~tK~l~G~~d~~~G~vi~--~~----~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~ 246 (386)
T PRK08045 184 ------PLAL----G-ADLVLHSCTKYLNGHSDVVAGVVIA--KD----PDVVTELAWWANNIGVTGGAFDSYLLLRGLR 246 (386)
T ss_pred ------chhh----C-CCEEEeecceeccCCCCceeEEEEe--Cc----HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhc
Confidence 2211 1 2389999999995 56788999987 54 4688888888888888899999999999998
Q ss_pred C--hhhhhhhhhHHHHHHHH
Q psy14428 439 D--PKLKAQCDETERIMSQL 456 (583)
Q Consensus 439 ~--~~~~~~~~~~~~~~~~l 456 (583)
. ..++++.++...+.+.+
T Consensus 247 tl~~R~~~~~~na~~la~~L 266 (386)
T PRK08045 247 TLVPRMELAQRNAQAIVKYL 266 (386)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 6 23444444444444443
No 149
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=1.1e-17 Score=177.26 Aligned_cols=193 Identities=14% Similarity=0.070 Sum_probs=144.6
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G 279 (583)
+..-...|++.+|++.+. +..++ +++|++|+.++ +..++.+||.|+++.|+|...... ++..|
T Consensus 62 ~~p~~~~le~~lA~l~g~--------~~~i~--~ssG~~Ai~~~---l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~G 128 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGA--------EAATA--FSTGMAAISNT---LYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMG 128 (398)
T ss_pred CChHHHHHHHHHHHHhCC--------CeEEE--eCChHHHHHHH---HHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCC
Confidence 445568999999999863 34455 67778888875 334566799999999999976543 45678
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. .|++.+++.+ .++++++++++|+||||.+++ +++|.++|++++++||+|++|.......
T Consensus 129 i~v~~vd~-------~d~e~l~~~i---~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~ 195 (398)
T PRK08249 129 VDVTLCET-------GDHEQIEAEI---AKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN 195 (398)
T ss_pred eEEEEcCC-------CCHHHHHHhc---CCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC
Confidence 88766543 3788888877 567899999999999999998 4557888999999999999998655331
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
++.. +.-+++.|+||.++.+|.++|++++ .+ +++++++.........+.+.+.++++..-++.
T Consensus 196 ------~l~~-----~~Divv~S~sK~l~g~~~~~gG~vv--~~----~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t 258 (398)
T PRK08249 196 ------PLAL-----GADLVIHSATKFLSGHADALGGVVC--GS----KELMEQVYHYREINGATMDPMSAYLILRGMKT 258 (398)
T ss_pred ------chhh-----CCCEEeccCceecCCCCCceEEEEE--CC----HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch
Confidence 1211 2237789999999878988855444 22 47889888877777778888888887776663
No 150
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.79 E-value=2.1e-17 Score=173.84 Aligned_cols=176 Identities=14% Similarity=0.031 Sum_probs=138.4
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEec
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 287 (583)
..+|++++|++++. +++++ |+|+++++.++ +..++.+||+|+++.|+|......++..|++++.+++
T Consensus 46 ~~~l~~~la~~~g~--------~~i~~--~~g~t~al~~~---l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~ 112 (361)
T cd06452 46 IKDFHHDLAEFLGM--------DEARV--TPGAREGKFAV---MHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPN 112 (361)
T ss_pred HHHHHHHHHHHcCC--------ceEEE--eCCHHHHHHHH---HHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEec
Confidence 56888999988752 68999 99999999885 4556677999999999876666678889999999998
Q ss_pred ccCC-CCCCChhhHHHHHHcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC
Q psy14428 288 FDNK-TNGLDFAGMMEDIKAMP----ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 288 ~d~~-~~g~d~~~l~~~l~~~~----~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~ 362 (583)
+.+ ++++|++.+++.+.... ++++++++++|+||||... ++++|+++|++++++||+|++|..-..+
T Consensus 113 -~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~---~~~~i~~~~~~~~~~vivD~a~~~g~~~---- 184 (361)
T cd06452 113 -TGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH---DAKKIAKVCHEYGVPLLLNGAYTVGRMP---- 184 (361)
T ss_pred -CCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec---cHHHHHHHHHHcCCeEEEECCcccCCcC----
Confidence 543 35899999998885321 3678999999999999764 4678888899999999999999742211
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
.+.. ..+..++++|+||.++ ++.|+||+++ + +++++++.+..
T Consensus 185 --~~~~----~~~~d~~~~s~~K~l~-~~~~~G~l~~--~-----~~~~~~l~~~~ 226 (361)
T cd06452 185 --VSGK----ELGADFIVGSGHKSMA-ASAPIGVLAT--T-----EEWADIVFRTS 226 (361)
T ss_pred --CCHH----HcCCCEEEecCCcccc-CCCCeEEEEE--C-----HHHHHHHhccc
Confidence 1111 2246789999999998 5669999999 6 47888887654
No 151
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.79 E-value=1.4e-17 Score=177.44 Aligned_cols=211 Identities=15% Similarity=0.140 Sum_probs=153.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYAN-----IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-----~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+++++.|.++.. +++.+.++..+. . ....|.+ ..|.+++++++++++.+..|.+ .+++++ ++
T Consensus 21 ~~~~l~~g~~~~~-----~p~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~--~~ 88 (398)
T cd00613 21 SMSFLGSGTYKHN-----PPAVIKRNILEN-E--FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASL--QD 88 (398)
T ss_pred CcccccccccCCc-----CcHHHHHHhccc-c--CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceec--cC
Confidence 4589999998633 456666666555 2 1345666 7999999999999999877653 457777 66
Q ss_pred CchhHHHHHHHHHHHhCCC--CCEEEEcCCCChhhHHHHhhcC----CeEEEEecccCCCCCCChhhHHHHHHcCCCCcE
Q psy14428 239 SGSGSLRVGTAFLERFYPG--VKTVYFPTPTWNGHVRFCTDSR----LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSI 312 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~~~G----~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~ 312 (583)
+++.+...+ ++..+..+ ||+|++++|.|+.+...++..| ++++.+++ ++ ++.+|++.+++.+ .++++
T Consensus 89 ~g~~~~~~~--~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i---~~~t~ 161 (398)
T cd00613 89 EATAAAEAA--GLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS-DE-GGTVDLEALKEEV---SEEVA 161 (398)
T ss_pred chHHHHHHH--HHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc-CC-CCCcCHHHHHHhc---CCCeE
Confidence 444333332 22223344 9999999999999988888887 89999988 33 3567889888877 56788
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc--
Q psy14428 313 LFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY-- 390 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~-- 390 (583)
++++++|+ |||.+. +.+++|.++|+++|+++|+|+++....... . ....+..+++.|++|.+ +|
T Consensus 162 ~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~---~-------~~~~~~d~~~~s~~K~~-~p~g 227 (398)
T cd00613 162 ALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGLK---P-------PGEYGADIVVGNLQKTG-VPHG 227 (398)
T ss_pred EEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCCC---C-------hHHcCCCEEEeeccccC-CCCC
Confidence 88888885 999883 457999999999999999999865333111 0 11235679999999998 67
Q ss_pred --CccceEEEEEcCCchhHHHHHHHH
Q psy14428 391 --GERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 391 --GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
|+|+||+++ + +++++.+
T Consensus 228 ~Ggp~~g~l~~--~-----~~~~~~~ 246 (398)
T cd00613 228 GGGPGAGFFAV--K-----KELVRFL 246 (398)
T ss_pred CCCCceeEEEE--h-----hhhHhhC
Confidence 899999999 6 3555543
No 152
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.78 E-value=1.2e-17 Score=177.36 Aligned_cols=210 Identities=14% Similarity=0.093 Sum_probs=151.4
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH----HHHhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV----RFCTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G 279 (583)
+..-...|++++|++.+.. ..++ +++|+.|+.++ +..+..+||+|+++.|+|.... ..++..|
T Consensus 63 ~~p~~~~le~~lA~l~g~~--------~~i~--~~sG~~Al~~~---l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G 129 (403)
T PRK07503 63 SNPTLALLEQRMASLEGGE--------AAVA--LASGMGAITAT---LWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG 129 (403)
T ss_pred CCchHHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH---HHHHcCCCCEEEEccCccchHHHHHHHHHhhCC
Confidence 3345789999999988632 2344 66777888875 3345677999999999887543 3456689
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.+++ + |++.+++.+ .++++++++++|+||||.+.+ +++|.++|+++|++||+|++|.......
T Consensus 130 ~~v~~vd~-~------d~~~l~~~i---~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~~ 196 (403)
T PRK07503 130 VTVRHVDL-T------DPAALKAAI---SDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQR 196 (403)
T ss_pred EEEEEeCC-C------CHHHHHHhc---CccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 99888876 2 677887777 567889999999999999887 5677888899999999999998654321
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH--HhccccCCChHHHHHHHHH
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL--IRGFYSNPPIHGARIVTEI 436 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~--~~~~~~~~s~~~q~~~~~~ 436 (583)
++. .+..+++.|+||.++.+| +|.|+++. + ++++++++.. ......+.+.+.++++..-
T Consensus 197 ------~l~-----~g~Di~v~S~tK~l~g~gd~~gG~v~~--~-----~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~ 258 (403)
T PRK07503 197 ------PLE-----LGADLVVHSATKYLGGHGDITAGLVVG--G-----KALADRIRLEGLKDMTGAVMSPFDAFLLMRG 258 (403)
T ss_pred ------chh-----hCCCEEEccccccccCCCceeEEEEEc--C-----HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcC
Confidence 121 133589999999999776 77888886 5 4788888743 4445677888888887777
Q ss_pred hCC--hhhhhhhhhHHHHHHHHH
Q psy14428 437 LSD--PKLKAQCDETERIMSQLK 457 (583)
Q Consensus 437 l~~--~~~~~~~~~~~~~~~~l~ 457 (583)
++. ..++++.++...+.+.+.
T Consensus 259 L~tl~~r~~~~~~na~~~a~~L~ 281 (403)
T PRK07503 259 LKTLALRMDRHCASAQAVAEWLA 281 (403)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 764 345555544444444443
No 153
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.77 E-value=1.6e-16 Score=168.21 Aligned_cols=190 Identities=17% Similarity=0.125 Sum_probs=130.0
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G 279 (583)
+..-..+|++.+|++.+. ++.|++ ++|+.|+..+ +..++.+||+|+++.|.|......+.. .|
T Consensus 59 ~~pt~~~Le~~lA~l~G~-------~~al~~---~sG~~Ai~~~---l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 59 GNPTVKLFEERMAVLEGG-------EEALAF---GSGMAAISAT---LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred CCcchHHHHHHHHHHhCC-------CcEEEE---CCHHHHHHHH---HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 445578999999999863 234544 4556677764 344566799999999998876655543 35
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
+++..++. .|++.+++++ .++++++++++|+||||.+++. ++|.++|+++++++|+|++|.......
T Consensus 126 i~~~~~~~-------~d~~~l~~~i---~~~tklV~lesp~NptG~v~dl---~~I~~la~~~g~~vivD~a~a~~~~~~ 192 (386)
T PRK06767 126 ITHSFCDM-------ETEADIENKI---RPNTKLIFVETPINPTMKLIDL---KQVIRVAKRNGLLVIVDNTFCSPYLQR 192 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhh---CcCceEEEEeCCCCCCceecCH---HHHHHHHHHcCCEEEEECCCcccccCC
Confidence 54443332 2677887777 5678999999999999999984 666777899999999999996443321
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHHH-hccccCCChHHHHHHHHHh
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKILI-RGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~~-~~~~~~~s~~~q~~~~~~l 437 (583)
++ . .+.-+++.|+||.++.+|.|+ ||+++ + +++++++.+.. .......+++.++++...+
T Consensus 193 ------pl----~-~g~Div~~S~sK~l~g~g~~~gG~v~~--~-----~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L 254 (386)
T PRK06767 193 ------PL----E-LGCDAVVHSATKYIGGHGDVVAGVTIC--K-----TRALAEKIRPMRKDIGGIMAPFDAWLLLRGL 254 (386)
T ss_pred ------ch----h-cCCcEEEecCcceecCCCCceeEEEEe--C-----hHHHHHHHHHHHHHhCCCCCHHHHHHHHcCC
Confidence 11 1 133478889999999899996 88988 6 35666654332 2233344555555444433
No 154
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=3.2e-17 Score=173.45 Aligned_cols=193 Identities=17% Similarity=0.112 Sum_probs=140.4
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G 279 (583)
+.....+|++++|++.+... .++ +++|++|+.++ +..++.+||+|++++|+|......+ +..|
T Consensus 59 ~~p~~~~Le~~lA~~~g~~~-------~i~---~~sG~~Ai~~~---l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~g 125 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGAY-------GRA---FSSGMAATDCL---LRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWG 125 (388)
T ss_pred CCccHHHHHHHHHHHhCCCc-------eEE---eCCHHHHHHHH---HHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCC
Confidence 55678999999999987532 233 45567898885 4445677999999999999654433 3357
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. .|++.+++.+ .++++++++++|+||||.+. ++++|+++|++++++||+|++|.......
T Consensus 126 i~~~~~d~-------~d~e~l~~~i---~~~tklV~ie~p~NPtg~~~---dl~~I~~la~~~gi~lIvD~a~a~~~~~~ 192 (388)
T PRK07811 126 VEYTPVDL-------SDLDAVRAAI---TPRTKLIWVETPTNPLLSIT---DIAALAELAHDAGAKVVVDNTFASPYLQQ 192 (388)
T ss_pred eEEEEeCC-------CCHHHHHHhc---CcCCeEEEEECCCCCcceec---CHHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 77766654 2788888777 56789999999999999764 56777888999999999999997654321
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++. .+--+++.|+||.++.+| .+.||+++ ++ +++.+++...........+.+.++++...++
T Consensus 193 ------p~~-----~gaDivv~S~sK~l~g~~~~~gG~vv~--~~----~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~ 255 (388)
T PRK07811 193 ------PLA-----LGADVVVHSTTKYIGGHSDVVGGALVT--ND----EELDEAFAFLQNGAGAVPGPFDAYLTLRGLK 255 (388)
T ss_pred ------chh-----hCCcEEEecCceeecCCCCcEEEEEEE--CC----HHHHHHHHHHHHhcCCCCCHHHHHHHHhccC
Confidence 121 123489999999998665 57799998 54 3677777766555555666776666666665
Q ss_pred C
Q psy14428 439 D 439 (583)
Q Consensus 439 ~ 439 (583)
.
T Consensus 256 t 256 (388)
T PRK07811 256 T 256 (388)
T ss_pred c
Confidence 4
No 155
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.77 E-value=8.6e-17 Score=171.60 Aligned_cols=200 Identities=14% Similarity=0.050 Sum_probs=145.4
Q ss_pred CChHHHHHHHHHhccCC-C-CCCC------CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNL-D-HEYA------NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~-~-~~Y~------~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~ 253 (583)
+++.+.+++.+...+.. . .... -...+.++|+++|++++. .++++|++ |+|+++++.++...+..
T Consensus 31 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-----~~~~~i~~--~~~~t~~i~~~~~~~~~ 103 (401)
T PRK10874 31 KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNA-----PDAKNIVW--TRGTTESINLVAQSYAR 103 (401)
T ss_pred CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCC-----CCCCEEEE--ECCHHHHHHHHHHHhhh
Confidence 55778888777765310 0 0000 012256888999998853 16789999 99999999986433311
Q ss_pred -hCCCCCEEEEcCCCChh----hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 254 -FYPGVKTVYFPTPTWNG----HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 254 -~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
..++||+|++++|.|+. +...++..|++++.+++ +. ++.+|++.+++.+ .++++++++++|+||||.+++
T Consensus 104 ~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~-~~~~d~~~l~~~i---~~~t~lv~i~~~~n~tG~~~~ 178 (401)
T PRK10874 104 PRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPL-GA-DRLPDVDLLPELI---TPRTRILALGQMSNVTGGCPD 178 (401)
T ss_pred ccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEec-CC-CCcCCHHHHHHhc---CcCcEEEEEeCCcccccCcCC
Confidence 13569999999999864 55667888999999998 44 3568899998887 567899999999999999997
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
. ++|.++|+++|+++|+|++|....+.- .+.. .+..+++.|++|.+|.+| +||+++ + +
T Consensus 179 ~---~~i~~l~~~~g~~~ivD~a~~~g~~~~------~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~--~-----~ 236 (401)
T PRK10874 179 L---ARAITLAHQAGMVVMVDGAQGAVHFPA------DVQA----LDIDFYAFSGHKLYGPTG--IGVLYG--K-----S 236 (401)
T ss_pred H---HHHHHHHHHcCCEEEEECCcccccccC------Cchh----cCCCEEEEecccccCCCc--cEEEEE--c-----h
Confidence 5 566888899999999999996433221 1211 234578899999998777 599998 6 4
Q ss_pred HHHHHHH
Q psy14428 409 RIMSQLK 415 (583)
Q Consensus 409 ~li~~l~ 415 (583)
++++++.
T Consensus 237 ~~~~~~~ 243 (401)
T PRK10874 237 ELLEAMS 243 (401)
T ss_pred HHHhcCC
Confidence 6777654
No 156
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.76 E-value=1.5e-16 Score=168.36 Aligned_cols=248 Identities=12% Similarity=0.049 Sum_probs=168.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|. ..+.+.+++.+.+++. . +.......++++++++++.+..+ .+++++ +++|
T Consensus 27 ~G~~~lD~~s~~~~~~lG~--~~p~v~~a~~~~~~~~--~-~~~~~~~~~~~~~la~~l~~~~~----~~~~~~--~~sG 95 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGH--CHPTVTKAVQEQLDDI--W-HVSNLFTNSLQEEVASLLAENSA----GDLVFF--CNSG 95 (377)
T ss_pred CCCEEEECCcchhhccCCC--CCHHHHHHHHHHHHhc--c-ccccccCCHHHHHHHHHHHhcCC----CCEEEE--eCCc
Confidence 3456788888876555564 4577778777776542 1 12234557899999999986543 257888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH-HHhhcCCeEE---EEecccCCCC---CCChhhHHHHHHcCCCCcEE
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR-FCTDSRLNVG---AYRYFDNKTN---GLDFAGMMEDIKAMPERSIL 313 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~~~~---~v~~~d~~~~---g~d~~~l~~~l~~~~~~~~~ 313 (583)
++|...+..+.+.. ...+.|++.+++|..... .....+.... ..|+ .++.. --|++.+++.+ .+++++
T Consensus 96 ~~a~~~A~~~a~~~-~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~l~~~~---~~~~~~ 170 (377)
T PRK02936 96 AEANEAALKLARKH-TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPL-LPGFTHVPFNDIKALKEVM---NEEVAA 170 (377)
T ss_pred HHHHHHHHHHHHHh-cCCCeEEEECCCcCCCcHHhhhccCCccccccCCCC-CCCceEeCCCCHHHHHHhc---cCCeEE
Confidence 99999875433322 324679999999875432 2222221110 0111 00000 01677787766 456889
Q ss_pred EEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCc
Q psy14428 314 FLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGE 392 (583)
Q Consensus 314 i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~Gl 392 (583)
+++..+++++|.. .+++.+++|.++|++||+++|+||+|.+|.+.+ ...+...+ ...+.+ .+|||.++ +|+
T Consensus 171 ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~-~~~~di---~t~sK~l~-~G~ 242 (377)
T PRK02936 171 VMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQF-GLDPDI---VTVAKGLG-NGI 242 (377)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhh-CCCCcE---EEEccccc-CCC
Confidence 9999999999977 589999999999999999999999999887655 12222222 212233 37999999 999
Q ss_pred cceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 393 RVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 393 RiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
|+||+++ + +++++.+........++.++++|.++.+.++.
T Consensus 243 ~ig~v~~--~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~ 282 (377)
T PRK02936 243 PVGAMIG--K-----KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQV 282 (377)
T ss_pred ccEEEEE--c-----HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999 6 57888886554455667899999999888864
No 157
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.76 E-value=3.3e-17 Score=175.99 Aligned_cols=248 Identities=15% Similarity=0.044 Sum_probs=171.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|. .++.+.+++.+.+.+. ...+.+..+..+|+++|++++.. .++|++ ++||
T Consensus 46 dG~~ylD~~~g~~~~~lGh--~~p~v~~ai~~q~~~~-~~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~~sG 113 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGH--AHPRVVEAVKEALERG-TSYGAPTEAEILLAKEIISRVPS-------VEMVRF--VNSG 113 (423)
T ss_pred CCCEEEEccccccccccCC--CCHHHHHHHHHHHHhC-CcCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--eCCH
Confidence 4567899998888766665 3478888887777653 22233667889999999998743 268999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh---cCCeEEEEeccc-------CCCC---CCChhhHHHHHHcC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD---SRLNVGAYRYFD-------NKTN---GLDFAGMMEDIKAM 307 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~---~G~~~~~v~~~d-------~~~~---g~d~~~l~~~l~~~ 307 (583)
++|++.+..+.+.... .++|+..+|+|..+...+.. .|......+... .... --|++.+++.+.+.
T Consensus 114 seA~e~Alk~ar~~~g-r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 192 (423)
T TIGR00713 114 TEATMSAVRLARGYTG-RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY 192 (423)
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc
Confidence 9999987666555554 68999999999997543322 111111111100 0000 01788888888644
Q ss_pred CCCcEEEEe-CCCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 308 PERSILFLQ-TSSHNPTGVDLS-EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 308 ~~~~~~i~i-~~p~NPTG~~~s-~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
..++.++++ |.|+| +|.+.+ ++.+++|.++|++|++++|+||+|.+|.++. .. ....+ +..+. +.+|||
T Consensus 193 ~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~---~~-~~~~~-~~~pD---i~t~sK 263 (423)
T TIGR00713 193 GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL---GG-AQEYF-GVEPD---LTTLGK 263 (423)
T ss_pred CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc---ch-hHHHh-CCCcc---hhhhhh
Confidence 345555555 79999 798887 6899999999999999999999999996642 11 11111 21222 337999
Q ss_pred cccccCccceEEEEEcCCchhHHHHHHHHHHH---HhccccCCChHHHHHHHHHhC
Q psy14428 386 NMGLYGERVGTFSVLTPTSDETERIMSQLKIL---IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~---~~~~~~~~s~~~q~~~~~~l~ 438 (583)
.++ +|+|+||+++ + +++++.+... .....++.++++|.++...++
T Consensus 264 ~l~-~G~pig~v~~--~-----~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~ 311 (423)
T TIGR00713 264 IIG-GGLPVGAFGG--R-----REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLK 311 (423)
T ss_pred hhc-CCCceeeeeE--H-----HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHH
Confidence 999 9999999999 6 5788888632 233456789999998777765
No 158
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.76 E-value=4e-17 Score=173.16 Aligned_cols=209 Identities=15% Similarity=0.108 Sum_probs=145.6
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRL 280 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 280 (583)
..-...|++++|++.+.. ..++ +++|+.++..+ +..++.+||+|++++|.|..+...+ +..|+
T Consensus 64 ~p~~~~Le~~lA~l~G~~--------~~~~--~~sG~~Ai~~~---l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 130 (398)
T PRK07504 64 NPTVDMFEKRMCALEGAE--------DARA--TASGMAAVTAA---ILCQVKAGDHVVAARALFGSCRYVVETLLPRYGI 130 (398)
T ss_pred CchHHHHHHHHHHHhCCC--------eeeE--ecCHHHHHHHH---HHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCe
Confidence 344689999999998642 2234 56777788654 3335567999999999999765544 45688
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
+++.++ .+|++.+++++ .+++++++++||+||||.+++ +++|.++|+++++++|+|++|....+..
T Consensus 131 ~v~~vd-------~~d~e~l~~ai---~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~- 196 (398)
T PRK07504 131 ESTLVD-------GLDLDNWEKAV---RPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK- 196 (398)
T ss_pred EEEEEC-------CCCHHHHHHhc---CcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC-
Confidence 877763 24788888877 578999999999999999998 5666778899999999999998654432
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHH-HHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMS-QLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~-~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
++ + .+..+++.|+||.++.+|+|+|++++ .++ +++. .+....+......+.+.++++..-++.
T Consensus 197 -----~~----~-~gaDivv~S~sK~l~g~g~~~GG~vv--~~~----~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t 260 (398)
T PRK07504 197 -----PL----E-LGAHIVVYSATKHIDGQGRCLGGVVL--SDK----AWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET 260 (398)
T ss_pred -----ch----h-hCCCEEEeeccccccCCccceEEEEE--eCc----HHHHHHHHHHHHHhCCCCCHHHHHHHHhccch
Confidence 11 1 14567899999999989999975554 232 3443 455444555566777777777776664
Q ss_pred --hhhhhhhhhHHHHHHHH
Q psy14428 440 --PKLKAQCDETERIMSQL 456 (583)
Q Consensus 440 --~~~~~~~~~~~~~~~~l 456 (583)
..++++.++.+.+.+.+
T Consensus 261 l~~R~~~~~~na~~la~~L 279 (398)
T PRK07504 261 LPVRVRQQTESAAAIADFL 279 (398)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 33444444444443333
No 159
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.76 E-value=3.5e-16 Score=167.00 Aligned_cols=199 Identities=13% Similarity=0.068 Sum_probs=143.9
Q ss_pred CChHHHHHHHHHhccCC--CC--CCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNL--DH--EYA----NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~--~~--~Y~----~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~ 253 (583)
+++.+.+++.+...... .. .+. ...+.+++|++++++++.. ++++|++ |+|+++++.++...+..
T Consensus 30 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~-----~~~~v~~--~~g~t~~l~~~~~~~~~ 102 (403)
T TIGR01979 30 KPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAA-----SDEEIVF--TRGTTESINLVAYSWGD 102 (403)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE--eCCHHHHHHHHHHHhhh
Confidence 45677777766654310 00 010 1124678999999998632 3679999 99999999886433221
Q ss_pred -hCCCCCEEEEcCCCChh----hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 254 -FYPGVKTVYFPTPTWNG----HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 254 -~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
..++||+|++++|.|+. +....+..|++++.++. + +++.+|++.+++.+ .++++++++++|+||||..++
T Consensus 103 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~-~-~~~~~~~~~l~~~i---~~~~~lv~~~~~~~~tG~~~~ 177 (403)
T TIGR01979 103 SNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPL-D-DDGTLDLDDLEKLL---TEKTKLVAITHVSNVLGTVNP 177 (403)
T ss_pred hcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEec-C-CCCCCCHHHHHHHh---ccCCeEEEEEcccccccccCC
Confidence 24569999999997665 34556678999999998 5 34678999998887 567899999999999999998
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
+++|.++|+++|+++|+|++|...... ..+ ...+..+++.|++|.+|.+| +|++++ + +
T Consensus 178 ---~~~i~~~~~~~~~~~ivD~a~~~g~~~------~~~----~~~~~d~~~~s~~K~~gp~G--~g~l~~--~-----~ 235 (403)
T TIGR01979 178 ---VEEIAKLAHQVGAKVLVDGAQAVPHMP------VDV----QALDCDFYVFSGHKMYGPTG--IGVLYG--K-----E 235 (403)
T ss_pred ---HHHHHHHHHHcCCEEEEEchhhcCccc------cCc----cccCCCEEEEecccccCCCC--ceEEEE--c-----h
Confidence 556788899999999999998643221 111 12245689999999998667 899998 5 3
Q ss_pred HHHHHH
Q psy14428 409 RIMSQL 414 (583)
Q Consensus 409 ~li~~l 414 (583)
++++.+
T Consensus 236 ~~~~~~ 241 (403)
T TIGR01979 236 ELLEQM 241 (403)
T ss_pred HHHhcC
Confidence 565554
No 160
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=6.4e-17 Score=171.68 Aligned_cols=189 Identities=14% Similarity=0.125 Sum_probs=140.1
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChh----hHHHHhhcCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG----HVRFCTDSRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~ 283 (583)
...|++.+|++.+. ++.|++ ++|++++.++ +..+..+||.|+++.|+|.. +...++..|.+++
T Consensus 62 ~~~Le~~lA~l~g~-------~~~v~~---~sG~~Ai~~~---l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~ 128 (405)
T PRK08776 62 RDLLGEALAELEGG-------AGGVIT---ATGMGAINLV---LNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALI 128 (405)
T ss_pred HHHHHHHHHHHhCC-------CceEEE---cCHHHHHHHH---HHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEE
Confidence 46788888887642 245554 4457899875 44456679999999999987 4444556688888
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.++. .|++.+++.+ .+++++++++||+||||.+.+ +++|+++|+++|++||+|++|..-...
T Consensus 129 ~v~~-------~d~~~l~~~i---~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~~----- 190 (405)
T PRK08776 129 TADL-------TDPRSLADAL---AQSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPALQ----- 190 (405)
T ss_pred EECC-------CCHHHHHHhc---CcCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccccC-----
Confidence 7765 1677887776 457899999999999999854 677888899999999999999753211
Q ss_pred hHHHHHHHHhcCcEEEEecCccccccc-CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLY-GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~-GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
.++. + +--+++.|.||.++.+ ++..|++++ ++ +++.+++.........+.+++.++++...++.
T Consensus 191 -~pl~-~----gaDivv~S~tK~l~g~~~~~~G~vv~--~~----~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~t 255 (405)
T PRK08776 191 -KPLE-F----GADLVLHSTTKYINGHSDVVGGAVVA--RD----AELHQQLVWWANALGLTGSPFDAFLTLRGLRT 255 (405)
T ss_pred -Cccc-c----cCCEEEecCceeecCCCCceEEEEEe--CC----HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCc
Confidence 1221 1 2238899999999766 578999887 55 46888887766666667889998888877663
No 161
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.76 E-value=2e-16 Score=168.74 Aligned_cols=283 Identities=14% Similarity=0.183 Sum_probs=174.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|. -.+.+.+++.+.+++. ..+...... +....+++.+....+ .+.+++ +++|
T Consensus 38 dG~~~iD~~~~~~~~~lGh--~~p~v~~a~~~~~~~~--~~~~~~~~~-~~~~~l~~~l~~~~~----~~~~~~--~~sG 106 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGH--CHPALVKALKEQGEKL--WHISNVFTN-EPALRLAKKLIDATF----AERVFF--ANSG 106 (403)
T ss_pred CCCEEEEcCcCHHhccCCC--CCHHHHHHHHHHHHhc--CcccCccCC-HHHHHHHHHHHhhCC----CCEEEE--eCch
Confidence 3456788887766555664 3467777777666541 111111112 223344444443221 368888 8999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHH-hhcC------------CeEEEEecccCCCCCCChhhHHH
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFC-TDSR------------LNVGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~-~~~G------------~~~~~v~~~d~~~~g~d~~~l~~ 302 (583)
++|...+..+.+... ...+.|+..+-+|....... ...| .+++.+|. + |++.+++
T Consensus 107 seA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----d~~~l~~ 179 (403)
T PRK05093 107 AEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF---N----DLAAVKA 179 (403)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC---C----CHHHHHH
Confidence 999988765554432 22357877777776653221 1111 12333332 1 6778877
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 303 DIKAMPERSILFLQTSSHNPTGVDL--SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~p~NPTG~~~--s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
.+ .++++++++. |.||+|.++ +.+.+++|+++|++|++++|+||+|.++.+.+ ...+...+ +.... +
T Consensus 180 ~l---~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~~-~~~pd---i 248 (403)
T PRK05093 180 VI---DDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG---DLFAYMHY-GVTPD---I 248 (403)
T ss_pred Hh---cCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchhhhhc-CCCCC---E
Confidence 77 4556666665 999999876 89999999999999999999999999987765 12222111 11112 5
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh---CChhhhhhhhhHHH-HHHHH
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL---SDPKLKAQCDETER-IMSQL 456 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l---~~~~~~~~~~~~~~-~~~~l 456 (583)
.||||+++ +|+|+||+++ + +++++.+........++.+++.|.++.+.+ .++.+.++...+.+ +.+.+
T Consensus 249 ~s~sK~l~-~G~rig~vv~--~-----~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L 320 (403)
T PRK05093 249 LTSAKALG-GGFPIGAMLT--T-----AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGL 320 (403)
T ss_pred EEeccccc-CCcceEEEEE--c-----HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 69999999 9999999999 7 578888876555556678999998888844 44444443333332 33333
Q ss_pred HHHHhh--ccCCCccchhhHHHHhcC
Q psy14428 457 KILIRG--FYSNPPIHGARIVTEILS 480 (583)
Q Consensus 457 ~~~~r~--~~~~~p~~g~~i~~~~l~ 480 (583)
+.+... .+..++..|.++|..+..
T Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~l~~ 346 (403)
T PRK05093 321 QKINQKYGVFSEIRGMGLLIGAELKP 346 (403)
T ss_pred HHHHhhCCCeEeEeeCceEEEEEecC
Confidence 332111 122445567777776643
No 162
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=1.1e-16 Score=169.47 Aligned_cols=208 Identities=13% Similarity=0.074 Sum_probs=153.5
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH----HHhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR----FCTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G 279 (583)
+.....+|+++++++.+ .+++++ ++|+++|+.++ +..++++||+|++++|+|..+.. .+...|
T Consensus 63 ~~pt~~~Le~~lA~l~g--------~~~~l~--~~sgt~Ai~~~---l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G 129 (394)
T PRK07050 63 ATPTSLALAQRLAEIEG--------GRHALL--QPSGLAAISLV---YFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG 129 (394)
T ss_pred CCHHHHHHHHHHHHHhC--------CCeEEE--eccHHHHHHHH---HHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC
Confidence 44456788888888765 257889 99999999986 33446779999999999998764 456679
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. + +.+.+++.+ .+++++++++||+|||| +..++++|+++|++++++||+|++|..-..-.
T Consensus 130 i~v~~vd~-~------~~~~l~~~i---~~~tklV~le~p~Np~~---~~~di~~I~~ia~~~gi~livD~a~a~~~~~~ 196 (394)
T PRK07050 130 ITVRFYDP-L------IGAGIADLI---QPNTRLIWLEAPGSVTM---EVPDVPAITAAARARGVVTAIDNTYSAGLAFK 196 (394)
T ss_pred eEEEEECC-C------CHHHHHHhc---CCCCeEEEEECCCCCCc---cHhhHHHHHHHHHHcCCEEEEECCcccccccC
Confidence 98887754 1 335566665 57789999999999996 67789999999999999999999986533211
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ + .+..|++.|+||.++ -.+.+.|++++ .+ ++++++++........+.+++..+.+...++
T Consensus 197 ------~l----~-~GaDi~v~S~tK~~~g~~~~~gG~v~~--~~----~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~ 259 (394)
T PRK07050 197 ------PF----E-HGVDISVQALTKYQSGGSDVLMGATIT--AD----AELHAKLKLARMRLGIGVSADDCSLVLRGLP 259 (394)
T ss_pred ------HH----H-cCCeEEEEECCceecCCCCeeEEEEEE--CC----HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC
Confidence 11 1 245699999999996 24567899888 54 4788888877776777888888877777666
Q ss_pred C--hhhhhhhhhHHHHHH
Q psy14428 439 D--PKLKAQCDETERIMS 454 (583)
Q Consensus 439 ~--~~~~~~~~~~~~~~~ 454 (583)
+ ..++++.++..++.+
T Consensus 260 tl~~Rl~~~~~~a~~la~ 277 (394)
T PRK07050 260 SLQVRLAAHDRSALEVAE 277 (394)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 4 234444444443333
No 163
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.75 E-value=1.6e-16 Score=167.27 Aligned_cols=192 Identities=14% Similarity=0.133 Sum_probs=142.2
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCCEEE
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVKTVY 262 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd~Vl 262 (583)
+...+++.+.+..+. + .|..++++++.+++.+.. ..+++++ |+|+++|+.++ +..+ ..|||+|+
T Consensus 11 ~~e~~a~~~~~~~~~---~---~~~g~~~~~~e~~la~~~----g~~~~v~--~~sgt~aL~~~---l~al~~~pGd~Vi 75 (376)
T TIGR02379 11 GQELEYIAEAISEGK---L---SGDGPFSRRCETWLENRT----GTKKALL--TPSCTAALEMA---ALLLDIQPGDEVI 75 (376)
T ss_pred HHHHHHHHHHHHcCC---c---cCCcHHHHHHHHHHHHHh----CCCeEEE--eCCHHHHHHHH---HHHcCCCCcCEEE
Confidence 445666666654321 1 123456666666665543 3468999 99999999986 2333 56799999
Q ss_pred EcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q psy14428 263 FPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR 342 (583)
Q Consensus 263 v~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~ 342 (583)
+++|+|..+...+...|++++.+++ |++++.+|++.+++.+ ++++++++ |+||||...+ +.+|.++|+++
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v~vd~-d~~~~~~d~~~le~~i---~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~ 145 (376)
T TIGR02379 76 MPSYTFVSTANAFVLRGAKIVFVDI-RPDTMNIDETLIESAI---THRTKAIV---PVHYAGVACD---MDTIMALANKH 145 (376)
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEec-CCCcCCCCHHHHHHhc---CcCceEEE---EeCCCCCccC---HHHHHHHHHHC
Confidence 9999999999999999999999999 6666778999998877 56778775 6789998886 45778889999
Q ss_pred CeEEEEeccCCCCC-CCCCCCchHHHHHHHHhcCcEEEEecCc----ccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 343 HLYPFFDMAYLGLT-SGDFDKDAFSLRYFAKEVGQLCLAQSFS----KNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 343 ~i~iI~De~Y~~l~-~~~~~~~~~~~~~~~~~~~~vi~i~S~S----K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
+++||+|+++.... +++. . + +.+..+.+|| |.+. +|.|.|++++ ++ +++.++++..
T Consensus 146 ~i~vIeDaa~~~g~~~~~~--~---~-------g~~~~~~~fSf~~~K~l~-~g~~gG~v~~--~~----~~~~~~~~~~ 206 (376)
T TIGR02379 146 QLFVIEDAAQGVMSTYKGR--A---L-------GSIGHLGTFSFHETKNYT-SGGEGGALLI--ND----QAFIERAEII 206 (376)
T ss_pred CCEEEEECccccCCccCCc--c---c-------CCCCCEEEEeCCCCCcCc-ccCCceEEEE--CC----HHHHHHHHHH
Confidence 99999999998775 4431 1 1 2333455566 9996 8999999999 65 4788888766
Q ss_pred Hh
Q psy14428 418 IR 419 (583)
Q Consensus 418 ~~ 419 (583)
..
T Consensus 207 ~~ 208 (376)
T TIGR02379 207 RE 208 (376)
T ss_pred HH
Confidence 43
No 164
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.75 E-value=1e-16 Score=168.79 Aligned_cols=210 Identities=16% Similarity=0.114 Sum_probs=155.4
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G 279 (583)
+..-..+|++.++++.+. +..++ +++|++|+..+ +..+..+||+|+++.|.|...... ++..|
T Consensus 38 ~~p~~~~le~~la~l~g~--------~~a~~--~~sG~~Ai~~~---l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g 104 (369)
T cd00614 38 GNPTVDALEKKLAALEGG--------EAALA--FSSGMAAISTV---LLALLKAGDHVVASDDLYGGTYRLFERLLPKLG 104 (369)
T ss_pred CChhHHHHHHHHHHHHCC--------CCEEE--EcCHHHHHHHH---HHHHcCCCCEEEECCCCcchHHHHHHHHHhhcC
Confidence 555678999999998763 35566 77788999885 444566799999999999886543 44678
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
+++..++. + |++.+++.+ .++++++++.+|+||||.+.+ +++|+++|+++|+++|+|++|....+..
T Consensus 105 ~~~~~v~~-~------d~~~l~~~i---~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~~ 171 (369)
T cd00614 105 IEVTFVDP-D------DPEALEAAI---KPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQR 171 (369)
T ss_pred eEEEEeCC-C------CHHHHHHhc---CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcCC
Confidence 88887765 1 577777776 457889999999999999987 5677888999999999999997654321
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ + .+..+++.|+||.++.+| ++.||+++ ++ ++++++++........+.+++.++++...++
T Consensus 172 ------~~----~-~g~Divv~S~tK~l~g~~~~~gG~v~~--~~----~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 234 (369)
T cd00614 172 ------PL----E-LGADIVVHSATKYIGGHSDVIAGVVVG--SG----EALIQRLRFLRLALGTILSPFDAWLLLRGLK 234 (369)
T ss_pred ------hh----h-hCCcEEEeccceeccCCCCceEEEEEe--Cc----HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC
Confidence 11 1 245689999999998776 89999999 63 2688888877766677788888888777776
Q ss_pred C--hhhhhhhhhHHHHHHHH
Q psy14428 439 D--PKLKAQCDETERIMSQL 456 (583)
Q Consensus 439 ~--~~~~~~~~~~~~~~~~l 456 (583)
. ..++++.++.+.+.+.+
T Consensus 235 tl~~r~~~~~~na~~la~~L 254 (369)
T cd00614 235 TLPLRMERHSENALKVAEFL 254 (369)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 4 23344444444443333
No 165
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.75 E-value=1.2e-16 Score=170.18 Aligned_cols=201 Identities=14% Similarity=0.109 Sum_probs=144.2
Q ss_pred CChHHHHHHHHHhccC---CCCCCCCCCC----CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh
Q psy14428 182 VLPSVKEAERRIYEKN---LDHEYANIGG----DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF 254 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~---~~~~Y~~~~G----~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~ 254 (583)
+++.+.+++.+..... ....|....+ ..++|+.++++++. ++++|++ ++|+++++.++...+...
T Consensus 29 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~------~~~~v~~--~~~~t~~l~~~~~~~~~~ 100 (397)
T TIGR01976 29 IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNA------DPPEVVF--GANATSLTFLLSRAISRR 100 (397)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCC------CCCeEEE--eCCHHHHHHHHHHHHHhc
Confidence 5678888877766431 1123544444 35888888888753 3457988 999999988754444334
Q ss_pred CCCCCEEEEcCCCChhhH----HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q psy14428 255 YPGVKTVYFPTPTWNGHV----RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330 (583)
Q Consensus 255 ~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~ 330 (583)
..+||+|++.+|.|.... ..++..|++++.+++ +++++.+|++.+++.+ .++++++++++|+||||.+++
T Consensus 101 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~i---~~~~~lv~i~~~~n~tG~~~~-- 174 (397)
T TIGR01976 101 WGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARV-DEATGELHPDDLASLL---SPRTRLVAVTAASNTLGSIVD-- 174 (397)
T ss_pred CCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEec-cccCCCcCHHHHHHhc---CCCceEEEEeCCCCCCCccCC--
Confidence 567999999999876543 456778999999998 5545678999998887 567899999999999999986
Q ss_pred HHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHH
Q psy14428 331 QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERI 410 (583)
Q Consensus 331 ~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~l 410 (583)
+++|.++|+++|+++|+|+++.. +. ....+ .+ .+.-+++.|++|.+| .|+|++++ + +++
T Consensus 175 -~~~i~~~~~~~~~~~ivD~a~~~---~~---~~~~~---~~-~~~d~~~~s~~K~~g---~~~G~l~~--~-----~~~ 233 (397)
T TIGR01976 175 -LAAITELVHAAGALVVVDAVHYA---PH---GLIDV---QA-TGADFLTCSAYKFFG---PHMGILWG--R-----PEL 233 (397)
T ss_pred -HHHHHHHHHHcCCEEEEehhhhc---cc---cCCCH---HH-cCCCEEEEechhhcC---CceEEEEE--c-----HHH
Confidence 66778889999999999999742 11 11112 12 233456689999874 57999999 6 467
Q ss_pred HHHHHHH
Q psy14428 411 MSQLKIL 417 (583)
Q Consensus 411 i~~l~~~ 417 (583)
++.+...
T Consensus 234 ~~~l~~~ 240 (397)
T TIGR01976 234 LMNLPPY 240 (397)
T ss_pred HhhCCCc
Confidence 7776643
No 166
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=1.2e-16 Score=168.22 Aligned_cols=212 Identities=12% Similarity=0.118 Sum_probs=160.7
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G 279 (583)
+..-...|++++|++.+ .+++++ |+|+++|+.++ +..++.+||.|+++.|+|......+ ...|
T Consensus 51 ~npt~~~Le~~lA~leg--------~e~ivv--t~gg~~Ai~~~---l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g 117 (388)
T PRK08861 51 GNPNRGLLEQTLSELES--------GKGAVV--TNCGTSALNLW---VSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD 117 (388)
T ss_pred CCchHHHHHHHHHHHhC--------CCeEEE--ECCHHHHHHHH---HHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence 44557899999999986 378999 99999999985 3445667999999999998644333 3346
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. .|++.+++.+ .++++++++++|+||||.+++.+ +|.++|+++++++|+|++|....+..
T Consensus 118 i~v~~vd~-------~d~e~l~~~i---~~~tklV~lesP~NPtG~v~dl~---~I~~la~~~gi~vIvDea~~~~~~~~ 184 (388)
T PRK08861 118 FKVQFVDQ-------SDAAALDAAL---AKKPKLILLETPSNPLVRVVDIA---ELCQKAKAVGALVAVDNTFLTPVLQK 184 (388)
T ss_pred eEEEEECC-------CCHHHHHHhc---CcCCeEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCccccccCC
Confidence 77766643 2778887776 56789999999999999999955 66778889999999999998654332
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCccccccc-CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY-GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~-GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ + .+--+++.|++|.++-+ +++.|++++ .+ +++.++++........+.+++..+.+..-++
T Consensus 185 ------pl----~-~GaDivv~S~tK~l~G~~d~~gG~i~~--~~----~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~ 247 (388)
T PRK08861 185 ------PL----E-LGADFVIHSTTKYINGHSDVIGGVLIT--KT----KEHAEELAWWGNCIGATGTPFDSYMTLRGIR 247 (388)
T ss_pred ------Cc----c-cCCCEEEeecceeccCCCcceeEEEEe--cH----HHHHHHHHHHHhccCCCCChHHHHHHHhcCC
Confidence 11 1 12348999999999754 578999988 54 4677888877777788889999998888888
Q ss_pred C--hhhhhhhhhHHHHHHHHHH
Q psy14428 439 D--PKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 439 ~--~~~~~~~~~~~~~~~~l~~ 458 (583)
. -.+++|.++...+.+.++.
T Consensus 248 Tl~lR~~~~~~~a~~~a~~L~~ 269 (388)
T PRK08861 248 TLGARMRVHEESAQQILAYLQT 269 (388)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh
Confidence 5 4567777776666665543
No 167
>PRK02948 cysteine desulfurase; Provisional
Probab=99.75 E-value=1e-16 Score=169.78 Aligned_cols=189 Identities=12% Similarity=0.044 Sum_probs=134.5
Q ss_pred CChHHHHHHHHHhccCCCCCCC--C------CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHH-
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYA--N------IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLE- 252 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~--~------~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~- 252 (583)
+++.+.+++.+..+.. ..++. . ..-..++|+.+|++++ .++++|++ |+|+++++.++...+.
T Consensus 12 ~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~--~~g~t~a~~~~~~~~~~ 82 (381)
T PRK02948 12 MSKEALQTYQKAASQY-FGNESSLHDIGGTASSLLQVCRKTFAEMIG------GEEQGIYF--TSGGTESNYLAIQSLLN 82 (381)
T ss_pred CCHHHHHHHHHHHHhc-CCCCccccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEE--eCcHHHHHHHHHHHHHH
Confidence 5677888877666431 11111 0 0114577788888775 35789999 9999999987633331
Q ss_pred HhCCCCCEEEEcCCC---ChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH
Q psy14428 253 RFYPGVKTVYFPTPT---WNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 253 ~~~~~gd~Vlv~~P~---y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
.+..+||.|++..+. |..+...++..|++++.+++ ++ ++.+|++.+++.+ .++++++++++|+||||.+++.
T Consensus 83 ~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~-~~-~~~~d~~~l~~~l---~~~~~lv~~~~~~n~tG~~~~~ 157 (381)
T PRK02948 83 ALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPV-DK-SGLIRLVDLERAI---TPDTVLASIQHANSEIGTIQPI 157 (381)
T ss_pred hccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEee-CC-CCCCCHHHHHHhc---CCCCEEEEEECCcCCcEeehhH
Confidence 122458999998844 45555567778999999998 53 3568999998877 4578899999999999999885
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
++|.++|+++++++|+|++ ..+...+. .+ ...+..+++.|+||.+|.+| +|++++
T Consensus 158 ---~~I~~l~~~~~~~vivD~~-~~~g~~~~-----~~----~~~~~d~~~~s~~K~~gp~G--~G~l~~ 212 (381)
T PRK02948 158 ---AEIGALLKKYNVLFHSDCV-QTFGKLPI-----DV----FEMGIDSLSVSAHKIYGPKG--VGAVYI 212 (381)
T ss_pred ---HHHHHHHHHcCCEEEEECh-hhcccccc-----Cc----ccCCCCEEEecHHhcCCCCc--EEEEEE
Confidence 4678889999999999965 34432210 11 22356778999999999888 799998
No 168
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=1.7e-16 Score=167.56 Aligned_cols=192 Identities=16% Similarity=0.080 Sum_probs=141.0
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh---hcCC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT---DSRL 280 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~G~ 280 (583)
......+|++.+|++++. +++++ +++|++|+..+ +..+..+||+|+++.|+|..+...++ ..|+
T Consensus 51 ~np~~~~lE~~lA~l~g~--------~~~l~--~~sG~~Ai~~~---l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~ 117 (385)
T PRK08574 51 ENPTLRPLEEALAKLEGG--------VDALA--FNSGMAAISTL---FFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGV 117 (385)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH---HHHHhCCCCEEEEcCCCchhHHHHHHHhhccCc
Confidence 344578999999999863 46777 88899999875 33456679999999999998877664 4476
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCC-CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPE-RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~-~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++..+. +|++.+++.+ .+ +++++++++|+||||.+++. ++|+++|+++|++||+|++|..-....
T Consensus 118 ~v~~~~--------~d~~~l~~~i---~~~~tklV~ie~p~NPtG~v~dl---~~I~~la~~~gi~livD~t~a~~~~~~ 183 (385)
T PRK08574 118 KVVLAY--------PSTEDIIEAI---KEGRTKLVFIETMTNPTLKVIDV---PEVAKAAKELGAILVVDNTFATPLLYR 183 (385)
T ss_pred EEEEEC--------CCHHHHHHhc---CccCceEEEEECCCCCCCEecCH---HHHHHHHHHcCCEEEEECCCCccccCC
Confidence 665442 2567777776 44 78899999999999999984 577888999999999999985322111
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ + .+..+++.|+||.++.+|-++ |++++ .+ +++.++++........+.+++..+.+..-++
T Consensus 184 ------~l----~-~GaDivv~S~sK~l~g~~d~~gG~vi~--~~----~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~ 246 (385)
T PRK08574 184 ------PL----R-HGADFVVHSLTKYIAGHNDVVGGVAVA--WS----GEFLEELWEWRRRLGTIMQPFEAYLVLRGLK 246 (385)
T ss_pred ------hh----h-hCCcEEEeeCceeecCCCCceeEEEEE--Cc----HHHHHHHHHHHHhcCCCCCHHHHHHHHcccC
Confidence 12 1 245689999999998788775 66666 43 4688888776665566667766666666555
Q ss_pred C
Q psy14428 439 D 439 (583)
Q Consensus 439 ~ 439 (583)
.
T Consensus 247 t 247 (385)
T PRK08574 247 T 247 (385)
T ss_pred c
Confidence 3
No 169
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.74 E-value=1.2e-16 Score=170.82 Aligned_cols=187 Identities=13% Similarity=0.025 Sum_probs=139.7
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh----HHHHhhcCC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH----VRFCTDSRL 280 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~ 280 (583)
..-..+|++.+|++.+. +..++ +++|+.|+..+ +..++.+||+|++++|.|... ...++..|+
T Consensus 56 ~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a---l~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 122 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGG--------VAALA--VASGQAAITYA---ILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGI 122 (418)
T ss_pred ChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH---HHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCc
Confidence 34468899999999853 34566 88888898875 334456799999999998654 344567899
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
+++.++. + |++.+++.+ .++++++++++|+||||.+.+ +++|.++|+++++++|+|++|.......
T Consensus 123 ~v~~v~~-~------d~~~l~~~l---~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~~- 188 (418)
T TIGR01326 123 EVRFVDP-D------DPEEFEKAI---DENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLCR- 188 (418)
T ss_pred EEEEECC-C------CHHHHHHhc---CcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcCC-
Confidence 9988865 1 778888777 567889999999999999886 5677888999999999999996432111
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
++ ..+..|++.|+||.++.+|+|+||+++ +++ .+.... ......+++...|.++...+
T Consensus 189 -----~l-----~~g~Divv~S~sK~l~g~G~~lGg~v~--~~~----~~~~~~---~~~~~~~~~~~~q~a~~~~~ 246 (418)
T TIGR01326 189 -----PI-----DHGADIVVHSATKYIGGHGTAIGGVIV--DGG----KFDWAN---GRFPLFTTPDPSYHGLVFTE 246 (418)
T ss_pred -----ch-----hcCCeEEEECccccccCCccceEEEEE--ecc----cccccc---cccccccCCCCccccchhhh
Confidence 11 135689999999999999999999999 532 222221 23456777888888877665
No 170
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.74 E-value=2e-16 Score=167.14 Aligned_cols=190 Identities=15% Similarity=0.146 Sum_probs=140.8
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh----HHHHhhcCC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH----VRFCTDSRL 280 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~ 280 (583)
..-..+|++.++++.+. +.+++ +++|+.|+..+ +..++++||+|+++.+.|... ...++..|+
T Consensus 53 ~p~~~~le~~la~l~g~--------~~~~~--~~sG~~Ai~~a---l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 53 NPTVAAFEERIAALEGA--------ERAVA--TATGMSAIQAA---LMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred CchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 33468999999998753 35677 88999999885 344566799999999988653 345677899
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
+++.+++ + |++.+++.+ .++++++++++|+||+|.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 120 ~v~~v~~-~------d~~~l~~~i---~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~- 185 (380)
T TIGR01325 120 EVSFVDP-T------DLNAWEAAV---KPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ- 185 (380)
T ss_pred EEEEECC-C------CHHHHHHhc---CCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 9988876 2 677777766 567899999999999999886 5677888899999999999998654332
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ + .+..|++.|+||.++.+|.++ |++++ + +++++.++..........+++..+++..-++
T Consensus 186 -----pl----~-~g~Divv~S~sK~l~g~g~~~gG~vv~--~-----~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 247 (380)
T TIGR01325 186 -----PL----K-LGADVVVYSATKHIDGQGRVMGGVIAG--S-----EELMAEVAVYLRHTGPAMSPFNAWVLLKGLE 247 (380)
T ss_pred -----ch----h-hCCCEEEeeccceecCCCCeEEEEEEe--C-----HHHHHHHHHHHHhhCCCCCHHHHHHHHhccC
Confidence 12 1 134578889999999889988 66666 5 4678888776655555556666555555444
No 171
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.74 E-value=2.1e-16 Score=167.70 Aligned_cols=210 Identities=11% Similarity=0.033 Sum_probs=152.9
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcC----CCChhhHHHHhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPT----PTWNGHVRFCTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~----P~y~~~~~~~~~~G 279 (583)
+.....+|++.+|++.+. ++.++ +++|+.|+..+ +..+.++||+|+++. |+|..+...++..|
T Consensus 68 ~~p~~~~le~~lA~l~g~--------~~al~--~~sG~~Ai~~~---l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G 134 (403)
T PRK07810 68 GNPTVSMFEERLRLIEGA--------EACFA--TASGMSAVFTA---LGALLGAGDRLVAARSLFGSCFVVCNEILPRWG 134 (403)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECChHHHHHHH---HHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence 344478999999999863 35566 77888888874 334566799999887 44555666778889
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. . |++.+++++ .++++++++++|+||||.+.+ +++|.++|+++++++|+|++|....+..
T Consensus 135 ~~v~~vd~---~----d~~~l~~ai---~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~ 201 (403)
T PRK07810 135 VETVFVDG---E----DLSQWEEAL---SVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR 201 (403)
T ss_pred cEEEEECC---C----CHHHHHHhc---CcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 99988864 1 778888877 567899999999999998886 6677888999999999999997654432
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ + .+.-+++.|++|.++.+|.++ |++++ ++ +.+-++++...+....+.+.+.++++..-++
T Consensus 202 ------~~----~-~gaDivv~S~tK~l~g~g~~~gG~v~~--~~----~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 202 ------GL----P-LGADVVVYSGTKHIDGQGRVLGGAILG--DR----EYIDGPVQKLMRHTGPALSAFNAWVLLKGLE 264 (403)
T ss_pred ------hh----h-cCCcEEEccCCceecCCcCceeEEEEe--Ch----HHHHHHHHHHHHHhCCCCCHHHHHHHHhccC
Confidence 11 1 134688999999998899998 77776 52 2233356555556667889999998888887
Q ss_pred C--hhhhhhhhhHHHHHHHH
Q psy14428 439 D--PKLKAQCDETERIMSQL 456 (583)
Q Consensus 439 ~--~~~~~~~~~~~~~~~~l 456 (583)
. ..++++.+...++.+.+
T Consensus 265 tl~~R~~~~~~~a~~~a~~L 284 (403)
T PRK07810 265 TLALRVRHSNASALRIAEFL 284 (403)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 4 34555555544444444
No 172
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.74 E-value=1.9e-16 Score=166.38 Aligned_cols=208 Identities=15% Similarity=0.059 Sum_probs=148.6
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhc
Q psy14428 203 ANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDS 278 (583)
Q Consensus 203 ~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~ 278 (583)
.+......|++++|++. . ++.|+ +++|+.|+..+ +..++++||+|++++|+|..+...+ +..
T Consensus 48 y~~p~~~~Le~~lA~l~-~-------~~~v~---~~sG~~Ai~~~---l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~ 113 (366)
T PRK07582 48 ASNPTWRALEAALGELE-G-------AEALV---FPSGMAAITAV---LRALLRPGDTVVVPADGYYQVRALAREYLAPL 113 (366)
T ss_pred CCCccHHHHHHHHHHHc-C-------CCEEE---ECCHHHHHHHH---HHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcC
Confidence 36677899999999987 1 24444 45556788874 3445677999999999998887654 457
Q ss_pred CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCC
Q psy14428 279 RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG 358 (583)
Q Consensus 279 G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~ 358 (583)
|++++.++. +++ .+ .+ .++++++++++|+||||.+.+ +++|+++|+++++++|+|++|.... +
T Consensus 114 G~~v~~v~~-~~~-----~~----~~---~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~-~ 176 (366)
T PRK07582 114 GVTVREAPT-AGM-----AE----AA---LAGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL-G 176 (366)
T ss_pred eEEEEEECC-CCh-----HH----Hh---ccCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-c
Confidence 999998887 321 11 12 357889999999999997765 7778889999999999999996421 1
Q ss_pred CCCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
. . ++ +. +.-++++|+||.++ .+|+|+||+++ ++ +++++++.........+.+++.++.+...+
T Consensus 177 ~---~--p~----~~-g~Divv~S~sK~l~G~~g~~~G~v~~--~~----~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l 240 (366)
T PRK07582 177 Q---R--PL----EL-GADLVVASDTKALTGHSDLLLGYVAG--RD----PELMAAVERWRLLAGAIPGPFEAWLAHRSL 240 (366)
T ss_pred c---C--ch----hc-CCcEEEecccccccCCCCeeEEEEEc--Cc----HHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 1 1 12 11 22378899999984 46799999998 54 478888888777777788899999888888
Q ss_pred CCh--hhhhhhhhHHHHHHHHH
Q psy14428 438 SDP--KLKAQCDETERIMSQLK 457 (583)
Q Consensus 438 ~~~--~~~~~~~~~~~~~~~l~ 457 (583)
..- .++++.++...+.+.++
T Consensus 241 ~tl~~R~~~~~~na~~la~~L~ 262 (366)
T PRK07582 241 GTLGLRFARQCANALAVAELLA 262 (366)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 753 33444444444444443
No 173
>PRK07179 hypothetical protein; Provisional
Probab=99.74 E-value=1.5e-15 Score=162.43 Aligned_cols=216 Identities=14% Similarity=0.082 Sum_probs=147.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc---CC---CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK---NL---DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~---~~---~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
.+...++++...+-+- . ..|.+.+++.+.+++ +. ...+....-..+|++.+|++++. +.+++
T Consensus 52 ~g~~~~~~~~~~YL~l-~---~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~ 119 (407)
T PRK07179 52 PGPDAIILQSNDYLNL-S---GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--------ESCLL 119 (407)
T ss_pred CCCcEEEeecCCccCC-C---CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--------CcEEE
Confidence 3456677766554321 1 235667766665543 11 11112223457888999998752 45677
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEE
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
++||++|...+ +..+..+||.|++..+.+......++..|++++.++. .|++.+++.+.. .+++++
T Consensus 120 --~~sG~~An~~~---l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~--~~~~lV 185 (407)
T PRK07179 120 --CQSGWAANVGL---LQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIER--HGPGII 185 (407)
T ss_pred --ECCHHHHHHHH---HHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHh--cCCeEE
Confidence 89999999874 5556677999999999888887777888888765532 288889888842 246788
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCc-EEEEecCcccccccCcc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQ-LCLAQSFSKNMGLYGER 393 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~l~GlR 393 (583)
++++++||||.+.+ +++|.++|+++|+++|+||+|....++. .....+..+ +...+ .+++.|+||.+| .|
T Consensus 186 ~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~--~g~g~~~~~-~~~~~vdi~~~S~sK~~g---~~ 256 (407)
T PRK07179 186 VVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGP--QGAGLVAEL-GLTSRVHFITASLAKAFA---GR 256 (407)
T ss_pred EECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCC--CCCchHHhc-CCCCCCCEEEeechHhhh---cc
Confidence 89999999999999 4677888999999999999997544432 111122222 21123 488999999986 37
Q ss_pred ceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 394 VGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 394 iG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
+||+++ + +++++.+....
T Consensus 257 ~G~l~~--~-----~~~~~~~~~~~ 274 (407)
T PRK07179 257 AGIITC--P-----RELAEYVPFVS 274 (407)
T ss_pred CeEEEe--C-----HHHHHHHHHhC
Confidence 999998 6 46777776543
No 174
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.73 E-value=2.9e-16 Score=166.27 Aligned_cols=190 Identities=13% Similarity=0.049 Sum_probs=136.0
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh----HHHHhhcCCe
Q psy14428 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH----VRFCTDSRLN 281 (583)
Q Consensus 206 ~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~ 281 (583)
.-...|++++|++.+.. ..++ +++|+.|+.++ +..+..+||.|+++.|.|... ...+...|++
T Consensus 59 p~~~~le~~lA~l~g~~--------~av~--~~sG~~Ai~~~---l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 125 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTE--------AAVA--TSSGMGAIAAT---LLTILKAGDHLISDECLYGCTFALLEHALTKFGIQ 125 (391)
T ss_pred chHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH---HHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeE
Confidence 34567999999998742 3455 77778888874 344566799999999987644 3445667988
Q ss_pred EEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCC
Q psy14428 282 VGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFD 361 (583)
Q Consensus 282 ~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~ 361 (583)
++.+++ + |++.+++.+ .++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|.......
T Consensus 126 ~~~vd~-~------d~e~l~~~i---~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~-- 190 (391)
T TIGR01328 126 VDFINM-A------IPEEVKAHI---KDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN-- 190 (391)
T ss_pred EEEECC-C------CHHHHHHhh---ccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC--
Confidence 888876 2 677887777 567899999999999999987 5567888899999999999997654321
Q ss_pred CchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhc--cccCCChHHHHHHHHHhC
Q psy14428 362 KDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRG--FYSNPPIHGARIVTEILS 438 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~--~~~~~s~~~q~~~~~~l~ 438 (583)
++ +. +.-+++.|+||.++.+|.|+|.+++ .+ ++++++++..... .....+.+..+++..-++
T Consensus 191 ----~~----~~-g~Divv~S~sK~lgg~g~~~gG~v~--~~----~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~ 254 (391)
T TIGR01328 191 ----PV----AL-GVDVVVHSATKYIGGHGDVVAGLIC--GK----AELLQQIRMVGIKDMTGSVISPFDAWLILRGLK 254 (391)
T ss_pred ----ch----hc-CCCEEEccccccccCCCCceEEEEE--cC----HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC
Confidence 11 11 2348889999999999998654444 23 4788888754322 233456666666655554
No 175
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.73 E-value=1e-15 Score=162.89 Aligned_cols=282 Identities=13% Similarity=0.120 Sum_probs=171.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++... ...+....-..+|.+.++++. + .+++++ +++
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~--~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~S 105 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHR--HPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT----G----KDMVLP--MNT 105 (396)
T ss_pred CCCEEEEcCCCHHhccCCCC--CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC----C----CCeEEE--cCC
Confidence 35567888777665555543 4677777766665411 111111222234444444432 1 368888 999
Q ss_pred chhHHHHHHHHHHHhC-------CCCCEEEEcCCCChhhH-HHHhhcCCe------------EEEEecccCCCCCCChhh
Q psy14428 240 GSGSLRVGTAFLERFY-------PGVKTVYFPTPTWNGHV-RFCTDSRLN------------VGAYRYFDNKTNGLDFAG 299 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~-------~~gd~Vlv~~P~y~~~~-~~~~~~G~~------------~~~v~~~d~~~~g~d~~~ 299 (583)
|++|.+.+..+.+... ...++|+..+-+|.... ......+.. +..+|. + |++.
T Consensus 106 GseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-d~~~ 178 (396)
T PRK04073 106 GAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY------G-DLEA 178 (396)
T ss_pred hHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC------C-CHHH
Confidence 9999998755544331 22367887777766543 222222211 122222 1 6777
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 300 MMEDIKAMPERSILFLQTSSHNPTGVDLSED-QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 300 l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~-~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
+++.+ .++++++++++++||||.+++++ .+++|.++|+++|+++|.||+|.+|...+ ..... ...+....
T Consensus 179 l~~~i---~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g---~~~~~-~~~~~~pd-- 249 (396)
T PRK04073 179 LKAAI---TPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG---KLFAC-DWDNVTPD-- 249 (396)
T ss_pred HHHhc---ccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc---HHHHh-hhcCCCCC--
Confidence 77766 45788999999999999998765 69999999999999999999999986654 11111 11111222
Q ss_pred EEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhHHH-HHH
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDETER-IMS 454 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~-~~~ 454 (583)
+.+|||.+|++|+|+||+++ + +++++.+........++.+++.|.++.+.|+ +..+.++..+... +.+
T Consensus 250 -i~~~sK~lg~gg~~ig~~~~--~-----~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~ 321 (396)
T PRK04073 250 -MYILGKALGGGVFPISCVAA--N-----RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKE 321 (396)
T ss_pred -EEEecccccCCCCcceEEEE--c-----HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 44689999988899999999 6 5788888655445566788999998888875 3334333333222 222
Q ss_pred HHHHHHhhccCCCccchhhHHHHh
Q psy14428 455 QLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 455 ~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
.++.+-...+...+..|.+++..+
T Consensus 322 ~L~~l~~~~i~~~~~~g~~~~~~~ 345 (396)
T PRK04073 322 QLKEIDNPMIKEVRGRGLFIGVEL 345 (396)
T ss_pred HHHhhcCCcccceecceEEEEEEe
Confidence 222221012233345566666554
No 176
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.73 E-value=4.5e-16 Score=166.34 Aligned_cols=199 Identities=13% Similarity=0.095 Sum_probs=143.5
Q ss_pred CChHHHHHHHHHhccCCCC----CCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHH-
Q psy14428 182 VLPSVKEAERRIYEKNLDH----EYA----NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLE- 252 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~----~Y~----~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~- 252 (583)
+++.+.+++.+........ .|. -..-..++|+++|++++. .++++|++ |+|+++++.++...+.
T Consensus 35 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~--t~g~t~~l~~~~~~~~~ 107 (406)
T PRK09295 35 KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVF--VRGTTEGINLVANSWGN 107 (406)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEE--eCCHHHHHHHHHHHhhh
Confidence 5677888877666431000 110 011256889999998863 15689999 9999999998643321
Q ss_pred HhCCCCCEEEEcCCCChh----hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 253 RFYPGVKTVYFPTPTWNG----HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 253 ~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
.+..+||+|+++++.|+. +...++..|++++.+++ +. ++.+|++.+++.+ .++++++++++|+||||.+++
T Consensus 108 ~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~-~~~~d~~~l~~~i---~~~t~lv~l~~~~n~tG~~~~ 182 (406)
T PRK09295 108 SNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPL-NP-DGTLQLETLPALF---DERTRLLAITHVSNVLGTENP 182 (406)
T ss_pred hcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec-CC-CCCCCHHHHHHhc---CCCcEEEEEecchhcccccCC
Confidence 245679999999987653 45566778999999998 43 3568999998877 567899999999999999998
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
. ++|.++|+++++++|+|++|...... ..+. ..+..+++.|++|.+|.+| +||+++ + +
T Consensus 183 ~---~~i~~~~~~~~~~vivD~a~~~g~~~------~~~~----~~~~D~~~~s~~K~~gp~G--~G~l~~--~-----~ 240 (406)
T PRK09295 183 L---AEMIALAHQHGAKVLVDGAQAVMHHP------VDVQ----ALDCDFYVFSGHKLYGPTG--IGILYV--K-----E 240 (406)
T ss_pred H---HHHHHHHHHcCCEEEEEcccccCccc------cCch----hcCCCEEEeehhhccCCCC--cEEEEE--c-----h
Confidence 4 56788899999999999998654321 1121 1234588899999888666 799999 6 3
Q ss_pred HHHHHH
Q psy14428 409 RIMSQL 414 (583)
Q Consensus 409 ~li~~l 414 (583)
++++.+
T Consensus 241 ~~~~~~ 246 (406)
T PRK09295 241 ALLQEM 246 (406)
T ss_pred HhHhhC
Confidence 565554
No 177
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.73 E-value=3e-16 Score=165.71 Aligned_cols=200 Identities=13% Similarity=0.099 Sum_probs=143.1
Q ss_pred CCCChHHHHHHHHHhccCCC--C----CCC--CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHH
Q psy14428 180 PYVLPSVKEAERRIYEKNLD--H----EYA--NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFL 251 (583)
Q Consensus 180 p~~~~~v~~a~~~~~~~~~~--~----~Y~--~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l 251 (583)
+.+++.+.+++.+.+..... . .+. -..+..++|+.++++++.. ++++|++ |+|+++++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~a~~~~~--- 78 (373)
T cd06453 9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAP-----SPDEIIF--TRNTTEAINLVA--- 78 (373)
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCCHHHHHHHHH---
Confidence 33567788887666543100 0 000 1133567889999988632 3679999 999999999863
Q ss_pred HHhCC---CCCEEEEcCCCChhh----HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCC
Q psy14428 252 ERFYP---GVKTVYFPTPTWNGH----VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTG 324 (583)
Q Consensus 252 ~~~~~---~gd~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG 324 (583)
..+.. +||+|++++|+|+.. ....+..|++++.+++ + +++.+|++.+++.+ .++++++++++|+||||
T Consensus 79 ~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~l---~~~~~~v~~~~~~~~tG 153 (373)
T cd06453 79 YGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPV-D-DDGQLDLEALEKLL---TERTKLVAVTHVSNVLG 153 (373)
T ss_pred HHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeec-C-CCCCcCHHHHHHHh---cCCceEEEEeCcccccC
Confidence 33333 699999999998874 3345578999999998 5 34678999999988 45788999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCc
Q psy14428 325 VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTS 404 (583)
Q Consensus 325 ~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~ 404 (583)
.+.+. ++|+++|++++++|++|++|...... ..+. ..+..+++.|++|.++. .++||+++ +
T Consensus 154 ~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~------~~~~----~~~~d~~~~s~~K~~~~--~g~g~~~~--~-- 214 (373)
T cd06453 154 TINPV---KEIGEIAHEAGVPVLVDGAQSAGHMP------VDVQ----DLGCDFLAFSGHKMLGP--TGIGVLYG--K-- 214 (373)
T ss_pred CcCCH---HHHHHHHHHcCCEEEEEhhhhcCcee------eecc----ccCCCEEEeccccccCC--CCcEEEEE--c--
Confidence 99985 56788889999999999998633211 0111 11234666788899984 67899998 6
Q ss_pred hhHHHHHHHHHH
Q psy14428 405 DETERIMSQLKI 416 (583)
Q Consensus 405 ~~~~~li~~l~~ 416 (583)
+++++++..
T Consensus 215 ---~~~~~~~~~ 223 (373)
T cd06453 215 ---EELLEEMPP 223 (373)
T ss_pred ---hHHhhcCCC
Confidence 467776664
No 178
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.72 E-value=1e-16 Score=167.29 Aligned_cols=239 Identities=12% Similarity=0.006 Sum_probs=172.1
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH-hCC-----
Q psy14428 183 LPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER-FYP----- 256 (583)
Q Consensus 183 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~-~~~----- 256 (583)
+..+.+.+....... ...|....+..++++++++++.+..|.+.+++++++ |+|+++|+.++...+.. ..+
T Consensus 12 ~~~~~~~~~~~~n~~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~ 88 (345)
T cd06450 12 PALLLEMLTSAKNAI-DFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVF--TSGGSESNLLALLAARDRARKRLKAG 88 (345)
T ss_pred HHHHHHHHHHhcCCC-CcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEE--eCChhHHHHHHHHHHHHHhhhhhhcc
Confidence 345555555555433 345888999999999999999888777655678999 99999999987444322 111
Q ss_pred ---C--CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc---CCCCcEEEEeCCCCCCCCCCCC
Q psy14428 257 ---G--VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA---MPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 257 ---~--gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~---~~~~~~~i~i~~p~NPTG~~~s 328 (583)
+ ++.|++++++|..+...++..|.+++.+|+ +++ +.+|++.+++.+.+ ...+++++++++|+||||.+.
T Consensus 89 ~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~-~~~-~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~- 165 (345)
T cd06450 89 GGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPV-DED-GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID- 165 (345)
T ss_pred cccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeee-CCC-CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC-
Confidence 2 348889999999998888888999999998 554 58899999998854 122678888999999999874
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE-EEEecCcccccccCccceEEEEEcCCchhH
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL-CLAQSFSKNMGLYGERVGTFSVLTPTSDET 407 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v-i~i~S~SK~~~l~GlRiG~lv~~~p~~~~~ 407 (583)
++++|+++|+++|+++++|++|..+..... ..... ....+++ .+..|++|.++ ++.++|++++
T Consensus 166 --~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~--~~~~~---~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~-------- 229 (345)
T cd06450 166 --PLEEIADLAEKYDLWLHVDAAYGGFLLPFP--EPRHL---DFGIERVDSISVDPHKYGL-VPLGCSAVLV-------- 229 (345)
T ss_pred --CHHHHHHHHHHhCCeEEEechhhHHHhhCh--hhHHH---hcCccccCEEEEchhHhhC-CCcchHHHHH--------
Confidence 477888999999999999999988775321 11111 1111233 45679999775 7788898776
Q ss_pred HHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 408 ERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 408 ~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
. .+.++++...+....+++..++..+..+.+.+.++
T Consensus 230 ~------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~ 265 (345)
T cd06450 230 R------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIR 265 (345)
T ss_pred H------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 55667777777766677666666655555555444
No 179
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.72 E-value=1.4e-15 Score=162.12 Aligned_cols=203 Identities=12% Similarity=0.003 Sum_probs=146.1
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
.++.+.+++.... .+|. ..+..++++.+.+.+.+.+|.. ..+.+++ ++++++++..+ +..+.++||+|
T Consensus 20 ~~~~V~~a~~~~~-----~~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~--~~~gt~a~~~a---~~~~~~~Gd~V 87 (401)
T PLN02409 20 IPERVLRAMNRPN-----EDHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIF--PTTGTGAWESA---LTNTLSPGDKV 87 (401)
T ss_pred CCHHHHHHhcCCC-----CCCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEE--eCCcHHHHHHH---HHhcCCCCCEE
Confidence 5577777654321 2222 4467888888888887766653 2235666 77889998874 34456679999
Q ss_pred EEcCCCChhh--HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 262 YFPTPTWNGH--VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-ERSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 262 lv~~P~y~~~--~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
++.+|.|... ...++..|++++.++. +.+ .++|++.+++.+...+ ++++++++++++||||.+++.+++.++++
T Consensus 88 lv~~~~~~~~~~~~~~~~~g~~v~~v~~-~~~-~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~- 164 (401)
T PLN02409 88 VSFRIGQFSLLWIDQMQRLNFDVDVVES-PWG-QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD- 164 (401)
T ss_pred EEeCCCchhHHHHHHHHHcCCceEEEEC-CCC-CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-
Confidence 9999988554 5677888999999998 433 4689999999885421 37889999999999999999888888877
Q ss_pred HHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 339 VKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 339 a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
|+++|+++|+|+++.--.. ++. .+..+.-+++.|.+|.++.|. ++||+++ + +++++++...
T Consensus 165 ~~~~g~~~vvD~v~s~g~~--------~id--~~~~~~D~~~~s~~K~l~~P~-G~G~l~~--~-----~~~~~~~~~~ 225 (401)
T PLN02409 165 CAQHPALLLVDGVSSIGAL--------DFR--MDEWGVDVALTGSQKALSLPT-GLGIVCA--S-----PKALEASKTA 225 (401)
T ss_pred hhccCcEEEEEcccccCCc--------ccc--ccccCccEEEEcCccccCcCC-CcceeEE--C-----HHHHHHHhcC
Confidence 9999999999999762111 110 112233467777799997544 7999999 6 5777777653
No 180
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.71 E-value=3.4e-15 Score=156.36 Aligned_cols=197 Identities=13% Similarity=0.113 Sum_probs=136.7
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
+++.+++++....... ...|. .-...+|+.++++++. +-+...|++ +.|+++++..+ +..+.+++|+|
T Consensus 10 ~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~la~~~~~----~~~~~~i~~--~~~gt~~l~~~---~~~~~~~~~~v 77 (355)
T TIGR03301 10 TSATVRDAMLVDWCHW-DSEFN--DVTDQVRDRLLALAGG----DDNHTCVLL--QGSGTFAVEAT---IGSLVPRDGKL 77 (355)
T ss_pred CCHHHHHHhhhhccCC-CHHHH--HHHHHHHHHHHHHhcC----CCCCcEEEE--eCCcHHHHHHH---HHhccCCCCeE
Confidence 5678888876622110 11232 2356778888887753 212236778 99999999985 44555567776
Q ss_pred EEcCC-CChh-hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 262 YFPTP-TWNG-HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 262 lv~~P-~y~~-~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
++.++ .|+. +...++..|.+++.+++ +. ++++|++.+++.+.+ .++.+++++++++||||...+ +++|+++|
T Consensus 78 i~~~~~~~~~~~~~~a~~~g~~~~~i~~-~~-~~~~d~~~l~~~l~~-~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~ 151 (355)
T TIGR03301 78 LVLINGAYGERLAKICEYLGIPHTDLNF-SE-YEPPDLNRIEEALAA-DPDITHVATVHHETTTGILNP---LEAIAKVA 151 (355)
T ss_pred EEECCCchhhHHHHHHHHcCCceEEEec-CC-CCCCCHHHHHHHHHh-CCCceEEEEEecCCcccchhH---HHHHHHHH
Confidence 65555 4554 56677889999999998 43 468899999998854 245677888999999999876 57888999
Q ss_pred HhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc-cccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 340 ~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
+++++++|+|+++..... +.++. ..+..+++.|+||.+ |++| +||+++ + +++++.+.
T Consensus 152 ~~~~~~livD~~~s~g~~------~~~~~----~~~~d~~~~s~~K~l~~~~G--~g~~~~--~-----~~~~~~~~ 209 (355)
T TIGR03301 152 RSHGAVLIVDAMSSFGAI------PIDIE----ELDVDALIASANKCLEGVPG--FGFVIA--R-----RDLLEASA 209 (355)
T ss_pred HHcCCEEEEEeccccCCc------ccchh----hcCccEEEecCCcccccCCc--eeEEEE--C-----HHHHHHhh
Confidence 999999999987643211 11222 224568899999986 5566 699999 6 46777765
No 181
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.71 E-value=1.8e-15 Score=159.95 Aligned_cols=191 Identities=12% Similarity=0.041 Sum_probs=142.2
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCCEEE
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVKTVY 262 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd~Vl 262 (583)
+.-.+++.+.+..+ .. .+.....+|++++|++++. ++++. ++|+++|+.++ +..+ .++||+|+
T Consensus 14 ~~e~~~~~~~l~~~-~~--~~g~~~~~le~~la~~~g~--------~~~v~--~~sgt~al~la---l~al~~~~Gd~Vi 77 (379)
T PRK11658 14 DEELAAVKEVLRSG-WI--TTGPKNQALEQAFCQLTGN--------QHAIA--VSSATAGMHIT---LMALGIGPGDEVI 77 (379)
T ss_pred HHHHHHHHHHHHcC-Cc--cCCHhHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH---HHHcCCCCCCEEE
Confidence 44455555555442 22 2334579999999999964 34666 89999999985 4445 56799999
Q ss_pred EcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q psy14428 263 FPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR 342 (583)
Q Consensus 263 v~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~ 342 (583)
+++|+|..+...+...|++++.+++ |.+++.+|++.+++.+ .+++++++ |+||+|...+ +++|.++|+++
T Consensus 78 v~~~~~~~~~~~~~~~G~~~v~vd~-~~~~~~~d~~~l~~~i---~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~ 147 (379)
T PRK11658 78 TPSLTWVSTLNMIVLLGATPVMVDV-DRDTLMVTPEAIEAAI---TPRTKAII---PVHYAGAPAD---LDAIRAIGERY 147 (379)
T ss_pred ECCCcHHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHhc---ccCCeEEE---EeCCCCCcCC---HHHHHHHHHHc
Confidence 9999999999999999999999998 6666678999998887 56778776 6778998765 56778889999
Q ss_pred CeEEEEeccCCC-CCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 343 HLYPFFDMAYLG-LTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 343 ~i~iI~De~Y~~-l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
|++||+|+++.. ..+.+. . + ...+ +.+.||++...+++.+.|+++. .+ +++.++++..
T Consensus 148 gi~vi~D~a~a~g~~~~~~--~---~----g~~g--~~~~Sf~~~K~l~~g~GG~v~~--~~----~~~~~~~~~~ 206 (379)
T PRK11658 148 GIPVIEDAAHAVGTYYKGR--H---I----GARG--TAIFSFHAIKNITCAEGGLVVT--DD----DELADRLRSL 206 (379)
T ss_pred CCeEEEECCCccCCeECCe--e---c----CCCC--CEEEeCCCCCcCcccCceEEEE--CC----HHHHHHHHHH
Confidence 999999999973 444431 1 1 1122 2567888777778889999888 65 4677777654
No 182
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.71 E-value=1.1e-15 Score=161.46 Aligned_cols=174 Identities=16% Similarity=0.109 Sum_probs=130.1
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEe
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 286 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 286 (583)
|..++++++.+++.+..| .+++++ |+|+++|+.++ +.....++||+|+++.|+|..+...+...|++++.++
T Consensus 28 g~~~~~~~~e~~la~~~g----~~~~v~--~~sgt~al~~~--l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d 99 (375)
T PRK11706 28 GDGGFTRRCQQWLEQRFG----SAKVLL--TPSCTAALEMA--ALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVD 99 (375)
T ss_pred CCCHHHHHHHHHHHHHhC----CCeEEE--ECCHHHHHHHH--HHHhCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEe
Confidence 345677777777765543 368999 99999999885 2223456799999999999999999999999999999
Q ss_pred cccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCC-CCCCCCchH
Q psy14428 287 YFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLT-SGDFDKDAF 365 (583)
Q Consensus 287 ~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~-~~~~~~~~~ 365 (583)
+ |++++.+|++.+++.+ .+++++++++ ||||...+ +++|+++|++++++||+|++|.... +++ .
T Consensus 100 ~-d~~~~~~d~~~le~~i---~~~tk~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~~~~---~-- 164 (375)
T PRK11706 100 I-RPDTMNIDETLIEAAI---TPKTRAIVPV---HYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMSTYKG---R-- 164 (375)
T ss_pred c-CCCcCCcCHHHHHHhc---CCCCeEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEECccccccccCC---e--
Confidence 9 6666778999998887 4567877754 57997755 5677888999999999999998876 333 1
Q ss_pred HHHHHHHhcCcEEEEecCc----ccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 366 SLRYFAKEVGQLCLAQSFS----KNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 366 ~~~~~~~~~~~vi~i~S~S----K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
++.. ...+++|| |.++ +|.+.++++. + +++.++++..+
T Consensus 165 ~~g~-------~~~~~~~Sf~~~K~l~-~g~gG~~~~~--~-----~~~~~~~~~~~ 206 (375)
T PRK11706 165 ALGT-------IGHIGCFSFHETKNYT-AGEGGALLIN--D-----PALIERAEIIR 206 (375)
T ss_pred eeec-------CcCEEEEeCCCCcccc-ccCCeEEEEC--C-----HHHHHHHHHHH
Confidence 1111 11334444 9997 7998777765 4 57887777665
No 183
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.71 E-value=1.4e-15 Score=159.62 Aligned_cols=193 Identities=17% Similarity=0.076 Sum_probs=145.4
Q ss_pred CCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC
Q psy14428 176 EDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY 255 (583)
Q Consensus 176 ~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~ 255 (583)
..|...+++.+.+++.+..++ |. +.+++++++.+++.+.+|. +++++ |+|++.|+.++ +..++
T Consensus 19 ~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g~----~~~~~--~~g~t~al~~a---l~al~ 81 (363)
T TIGR01437 19 ILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLGV----EDAVI--VSSASAGIAQS---VAAVI 81 (363)
T ss_pred cCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhCC----CeEEE--EcCHHHHHHHH---HHHHh
Confidence 455555788999998887642 32 4678888888888776653 47888 99999999986 34445
Q ss_pred CCCC---------------EEEEcCCCChhh----HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEE-
Q psy14428 256 PGVK---------------TVYFPTPTWNGH----VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFL- 315 (583)
Q Consensus 256 ~~gd---------------~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~- 315 (583)
.+|| +|+++.|.|..| ...+...|++++.++. + +.+|++.+++++ ++++++++
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~-~---~~~d~~~le~ai---~~~t~ai~~ 154 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY-A---NECSAEQLEAAI---TEKTAAILY 154 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC-C---CCCCHHHHHHhc---ChhceEEEE
Confidence 6687 999999888766 5677888999998876 2 468999999988 56667555
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccce
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG 395 (583)
+++||||+|.+.+.+ +|.++|+++|+++|+|++|.. + .... ... +--+++.|++|.+ +|+|.|
T Consensus 155 v~~~~~~~g~~~~~~---~i~~~a~~~gi~vivD~a~~~----~----~~~~---~~~-g~D~~~~S~~K~l--~gp~~G 217 (363)
T TIGR01437 155 IKSHHCVQKSMLSVE---DAAQVAQEHNLPLIVDAAAEE----D----LQKY---YRL-GADLVIYSGAKAI--EGPTSG 217 (363)
T ss_pred EecCCCCcCCcCCHH---HHHHHHHHcCCeEEEECCCCC----c----hHHH---HHc-CCCEEEEeCCccc--CCCceE
Confidence 688999999999865 568899999999999999961 1 1111 121 3357779999976 688999
Q ss_pred EEEEEcCCchhHHHHHHHHHH
Q psy14428 396 TFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~~l~~ 416 (583)
++++ + +++++.+..
T Consensus 218 ~l~~--~-----~~~i~~~~~ 231 (363)
T TIGR01437 218 LVLG--K-----KKYIEWVKL 231 (363)
T ss_pred EEEE--c-----HHHHHHHHh
Confidence 9998 6 467777643
No 184
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.71 E-value=1.5e-15 Score=161.08 Aligned_cols=202 Identities=12% Similarity=0.014 Sum_probs=149.7
Q ss_pred CChHHHHHHHHHhccCC-------CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh
Q psy14428 182 VLPSVKEAERRIYEKNL-------DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF 254 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~-------~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~ 254 (583)
+++.+.+++.+...... ...+.......++|+.+|++++. +++++ |+|+++++.++ +..+
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--------~~~~~--~~g~t~a~~~a---l~~l 98 (387)
T PRK09331 32 LTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--------DEARV--THGAREGKFAV---MHSL 98 (387)
T ss_pred CCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH---HHHh
Confidence 45778888777663311 11122233478999999999863 46778 99999999875 4455
Q ss_pred CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC----CCCcEEEEeCCCCCCCCCCCCHH
Q psy14428 255 YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM----PERSILFLQTSSHNPTGVDLSED 330 (583)
Q Consensus 255 ~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~----~~~~~~i~i~~p~NPTG~~~s~~ 330 (583)
..+||+|+++.++|......++..|++++.++...++++.+|++.+++.+.+. .++++++++++|+||||...+
T Consensus 99 ~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~-- 176 (387)
T PRK09331 99 CKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD-- 176 (387)
T ss_pred cCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc--
Confidence 67799999999997777777888999999998721234678999999988642 246889999999999997665
Q ss_pred HHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHH
Q psy14428 331 QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERI 410 (583)
Q Consensus 331 ~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~l 410 (583)
+++|.++|+++|+++|+|++|..-..+ .... ..+..+++.|++|.++ .+.|+||+++ + +++
T Consensus 177 -l~~I~~la~~~g~~livD~a~~~g~~~------~~~~----~~g~D~~~~s~~K~l~-~~~~~G~l~~--~-----~~~ 237 (387)
T PRK09331 177 -AKKVAKVAHEYGIPFLLNGAYTVGRMP------VDGK----KLGADFIVGSGHKSMA-ASAPSGVLAT--T-----EEY 237 (387)
T ss_pred -HHHHHHHHHHcCCEEEEECCcccCCcC------CCHH----HcCCCEEEeeCccccc-CCCCEEEEEE--C-----HHH
Confidence 777788899999999999999742211 1111 1245688999999998 5669999998 6 467
Q ss_pred HHHHHHH
Q psy14428 411 MSQLKIL 417 (583)
Q Consensus 411 i~~l~~~ 417 (583)
++.+.+.
T Consensus 238 i~~~~~~ 244 (387)
T PRK09331 238 ADKVFRT 244 (387)
T ss_pred Hhhcccc
Confidence 7776554
No 185
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.70 E-value=1.9e-15 Score=160.23 Aligned_cols=195 Identities=15% Similarity=0.096 Sum_probs=138.2
Q ss_pred CCCChHHHHHHHHHhccC-----CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHH--
Q psy14428 180 PYVLPSVKEAERRIYEKN-----LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLE-- 252 (583)
Q Consensus 180 p~~~~~v~~a~~~~~~~~-----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~-- 252 (583)
.++++.+.+++.+...+. ..+.|+ ..+.+.|++++++++... +. .++++|++ |+|+++++.++...+.
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~~-~~-~~~~~i~~--t~g~teal~~~~~~~~~~ 83 (382)
T TIGR03403 9 TMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKGI-NA-RDLDDIII--TSCATESNNWVLKGVYFD 83 (382)
T ss_pred CCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHHc-Cc-CCCCeEEE--eCCHHHHHHHHHHHHHHh
Confidence 335678888887766531 112232 456789999999998632 21 26789999 9999999998643221
Q ss_pred Hh-CCCCCEEEEcCCCChhh---HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 253 RF-YPGVKTVYFPTPTWNGH---VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 253 ~~-~~~gd~Vlv~~P~y~~~---~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
.+ .+++++|+++.+.|+.+ ...++..|++++.+|+ ++ ++.+|++.+++.+ .++++++++++||||||.+++
T Consensus 84 ~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~-~~-~g~~d~~~l~~~i---~~~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 84 EILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPI-NE-QGTITAEQVREAI---TEKTALVSVMWANNETGMIFP 158 (382)
T ss_pred hcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEec-CC-CCCCCHHHHHHhc---ccCCeEEEEEcccCCCccccC
Confidence 11 23357899887555544 4445678999999998 54 3677899998887 456789999999999999999
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
.+ +|.++|+++|+++++|+++..-... ..+ .+ .+--+++.|+.|.+|.+|+ |++++
T Consensus 159 ~~---~I~~la~~~g~~~ivD~a~~~g~~~------~~~---~~-~~~D~~~~s~~K~~gp~G~--g~l~v 214 (382)
T TIGR03403 159 IK---EIGEICKERGVLFHTDAVQAIGKIP------VDV---QK-AGVDFLSFSAHKFHGPKGV--GGLYI 214 (382)
T ss_pred HH---HHHHHHHHcCCEEEEechhhcCCCc------cCc---cc-cCCCEEEEcchhhCCCCce--EEEEE
Confidence 54 6788889999999999996522111 111 11 1223788999998887784 88887
No 186
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.70 E-value=5e-15 Score=158.07 Aligned_cols=238 Identities=12% Similarity=0.147 Sum_probs=158.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+... ....|. .....+|.+.+++.. ..+++++ ++
T Consensus 37 dG~~~lD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~--------~~~~v~~--~~ 103 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHA--HPALREALNEQASKFWHTGNGYT-NEPVLRLAKKLIDAT--------FADRVFF--CN 103 (406)
T ss_pred CCCEEEEcCcCHhhccCCCC--CHHHHHHHHHHHhhcccccCccC-CHHHHHHHHHHHhhC--------CCCeEEE--cC
Confidence 34567888887766566653 467777777666431 111121 111234444444432 1368999 99
Q ss_pred CchhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhhcCCe-------------EEEEecccCCCCCCChhhH
Q psy14428 239 SGSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTDSRLN-------------VGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~d~~~~g~d~~~l 300 (583)
+|++|.+.+..+.+... ++...|+..+.+|..........+.. ++.+|. .|++.+
T Consensus 104 sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 176 (406)
T PRK12381 104 SGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-------NDLNSA 176 (406)
T ss_pred CcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-------CCHHHH
Confidence 99999998766654442 23578999999998875433332221 111111 267778
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDL--SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~--s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
++.+ .+++.++++ +|.||+|.++ +.+.+++|.++|++|++++|+||+|.++.+.+ ...+...+ +....
T Consensus 177 ~~~l---~~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G---~~~~~~~~-~v~pD-- 246 (406)
T PRK12381 177 SALI---DDQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHY-GVTPD-- 246 (406)
T ss_pred HHhc---cCCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc---chhhhHhh-CCCCC--
Confidence 7766 345666665 7999999876 79999999999999999999999998886655 22222221 11122
Q ss_pred EEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
+.||||.++ +|+|+||+++ + +++++.+........++.+++.|.++.+.+
T Consensus 247 -i~t~sK~l~-gG~~ig~~~~--~-----~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l 296 (406)
T PRK12381 247 -VLTTAKALG-GGFPIGAMLT--T-----EKCASVMTVGTHGTTYGGNPLASAVAGKVL 296 (406)
T ss_pred -EEEehhhhh-CCCceEEEEE--c-----HHHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Confidence 359999998 9999999999 7 578888876544556678888888888744
No 187
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.70 E-value=1.1e-15 Score=160.33 Aligned_cols=197 Identities=15% Similarity=0.112 Sum_probs=136.4
Q ss_pred CCCChHHHHHHHHHhccCCCCCCCCCCC--CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCC
Q psy14428 180 PYVLPSVKEAERRIYEKNLDHEYANIGG--DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG 257 (583)
Q Consensus 180 p~~~~~v~~a~~~~~~~~~~~~Y~~~~G--~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~ 257 (583)
+.+++.+.+++.+... ...| +... ..++++.++++++. + .++.+++ |.|+++++.++ +..++.+
T Consensus 8 ~~~~~~v~~a~~~~~~---~~~~-~~~~~~~~~~~~~la~~~g~----~-~~~~~~~--~~~~t~al~~~---~~~~~~~ 73 (356)
T cd06451 8 SNVPPRVLKAMNRPML---GHRS-PEFLALMDEILEGLRYVFQT----E-NGLTFLL--SGSGTGAMEAA---LSNLLEP 73 (356)
T ss_pred cCCCHHHHHHhCCCcc---CCCC-HHHHHHHHHHHHHHHHHhcC----C-CCCEEEE--ecCcHHHHHHH---HHHhCCC
Confidence 3356777777654321 1222 2111 45677777777742 1 2345677 88889999885 4456677
Q ss_pred CCEEEEcCCCChh--hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q psy14428 258 VKTVYFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQL 335 (583)
Q Consensus 258 gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l 335 (583)
||+|++++|+|.. +...++..|++++.+|. ++ ++.+|++.+++.+.. .+++++++++|+||||.+++.+ +|
T Consensus 74 g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~~~---~i 146 (356)
T cd06451 74 GDKVLVGVNGVFGDRWADMAERYGADVDVVEK-PW-GEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNPLE---GI 146 (356)
T ss_pred CCEEEEecCCchhHHHHHHHHHhCCCeEEeec-CC-CCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccCHH---HH
Confidence 9999999987654 56778889999999998 54 367899999998842 2678899999999999998855 56
Q ss_pred HHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 336 AVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 336 ~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
.++|+++|++||+|+++.. +. .+.++. .. +..+++.|.+|.++.| .++||++. + +++++.+.
T Consensus 147 ~~~a~~~~~~li~D~~~~~---g~---~~~~~~---~~-~~d~~~~s~~K~l~~p-~g~G~l~~--~-----~~~~~~~~ 208 (356)
T cd06451 147 GALAKKHDALLIVDAVSSL---GG---EPFRMD---EW-GVDVAYTGSQKALGAP-PGLGPIAF--S-----ERALERIK 208 (356)
T ss_pred HHHHHhcCCEEEEeeehhc---cC---cccccc---cc-CccEEEecCchhccCC-CCcceeEE--C-----HHHHHHHH
Confidence 7788899999999998752 21 011111 11 2235567889999854 46899999 6 46777665
No 188
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.70 E-value=2.2e-15 Score=161.96 Aligned_cols=200 Identities=12% Similarity=0.047 Sum_probs=142.5
Q ss_pred CChHHHHHHHHHhccC-C-C---CCCCC---CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHH-
Q psy14428 182 VLPSVKEAERRIYEKN-L-D---HEYAN---IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLE- 252 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~-~-~---~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~- 252 (583)
+++.+.+++.+...+. . . ..|.. .....++|++++++++.. ++++|++ |+|+++++.++...+.
T Consensus 44 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~--t~g~t~al~~i~~~~~~ 116 (424)
T PLN02855 44 KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINAS-----TSREIVF--TRNATEAINLVAYTWGL 116 (424)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE--eCCHHHHHHHHHHHhhh
Confidence 4577778776665431 0 0 11111 122468999999998631 3579999 9999999998643321
Q ss_pred HhCCCCCEEEEcCCCChh----hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 253 RFYPGVKTVYFPTPTWNG----HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 253 ~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
...++||+|++++|.|+. +...++..|++++.+++ +.+ ..+|++.+++.+ .++++++++++++||||.+++
T Consensus 117 ~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~-~~~-~~~~~~~l~~~i---~~~t~lv~i~~~~n~tG~~~~ 191 (424)
T PLN02855 117 ANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGL-TPD-EVLDVEQLKELL---SEKTKLVATHHVSNVLGSILP 191 (424)
T ss_pred hcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEec-CCC-CCcCHHHHHHHh---ccCceEEEEeCccccccccCC
Confidence 134669999999997664 45566778999999998 443 568999998888 567899999999999999998
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
.+ +|+++|++++++||+|+++..-.. +..+ ...+..+++.|++|.+|.+| +||+++ + +
T Consensus 192 ~~---~I~~l~~~~g~~vivD~a~~~g~~------~~~~----~~~~~d~~~~s~~K~~gp~G--~G~l~~--~-----~ 249 (424)
T PLN02855 192 VE---DIVHWAHAVGAKVLVDACQSVPHM------PVDV----QTLGADFLVASSHKMCGPTG--IGFLWG--K-----S 249 (424)
T ss_pred HH---HHHHHHHHcCCEEEEEhhhhcCCc------CCCc----hhcCCCEEEeecccccCCCc--cEEEEE--c-----h
Confidence 54 668889999999999999842111 1112 12233577999999887555 899999 6 3
Q ss_pred HHHHHHH
Q psy14428 409 RIMSQLK 415 (583)
Q Consensus 409 ~li~~l~ 415 (583)
++++++.
T Consensus 250 ~~~~~~~ 256 (424)
T PLN02855 250 DLLESMP 256 (424)
T ss_pred hhhhcCC
Confidence 5666653
No 189
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.69 E-value=6e-15 Score=155.94 Aligned_cols=281 Identities=11% Similarity=0.036 Sum_probs=180.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
.+...+|+..|......|. .|.+.+++.+.+... ..+ +..-..++++++++.+... ++ .+++ +++
T Consensus 27 dg~~~lD~~s~~~~~~lG~---~p~v~~a~~~~~~~~--~~~-~~~~~~~~~~~la~~l~~~------~~~~~~~--~~S 92 (375)
T PRK04260 27 DGKKYLDFSSGIGVTNLGF---HPQVQQALQKQAGLI--WHS-PNLYLNSLQEEVAQKLIGD------KDYLAFF--CNS 92 (375)
T ss_pred CCCEEEECCCCcccccCCC---CHHHHHHHHHHHHhc--Ccc-cCccCCHHHHHHHHHHhcC------cCCEEEE--cCc
Confidence 3456788877654444453 356888777766531 122 2233467889999887531 23 4577 899
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH-HHHhhcCCe---------EEEEecccCCCCCCChhhHHHHHHcCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV-RFCTDSRLN---------VGAYRYFDNKTNGLDFAGMMEDIKAMPE 309 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~---------~~~v~~~d~~~~g~d~~~l~~~l~~~~~ 309 (583)
+++|...+..+.+...+ ++.|++.+.+|.... ..+...|.+ +..++.. . -.|++.+++.+ .+
T Consensus 93 GseA~~~Al~~ar~~~~-~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~dl~~l~~~l---~~ 164 (375)
T PRK04260 93 GAEANEAAIKIARKATG-KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA-I---FNDLNSVKALV---NK 164 (375)
T ss_pred cHHHHHHHHHHHHHhcC-CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe-C---CCCHHHHHHhc---CC
Confidence 99999876555544444 678999999988642 222222221 1111110 0 12677777766 45
Q ss_pred CcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 310 RSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
+..++++.+++|++|... +.+.++++.++|+++|+++|+||+|.++...+ ...+.... ...+. +.||||.++
T Consensus 165 ~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g---~~~~~~~~-~~~pd---i~t~sK~l~ 237 (375)
T PRK04260 165 NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG---KLYAFEHY-GIEPD---IFTLAKGLA 237 (375)
T ss_pred CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhHhh-CCCCC---EEEeccccc
Confidence 678899999999999874 56789999999999999999999999876544 22222121 22233 348999998
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc-----
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF----- 463 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~----- 463 (583)
+|+|+||+++ + +++++.+.........+.+++.|.++.++++....+.+.++.+...+.+++.++..
T Consensus 238 -~G~~ig~~~~--~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 309 (375)
T PRK04260 238 -NGVPVGAMLA--K-----SSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKE 309 (375)
T ss_pred -CCcceEEEEE--c-----HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999 7 47788776554555677789999999999865433344444444444443333221
Q ss_pred -cCCCccchhhHHHHh
Q psy14428 464 -YSNPPIHGARIVTEI 478 (583)
Q Consensus 464 -~~~~p~~g~~i~~~~ 478 (583)
+...+..|.++|..+
T Consensus 310 ~~~~~~~~g~~~~~~~ 325 (375)
T PRK04260 310 TVTTVRGLGYMIGIET 325 (375)
T ss_pred CeeEEeccceEEEEEe
Confidence 223344677777765
No 190
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.68 E-value=2.5e-15 Score=158.15 Aligned_cols=214 Identities=14% Similarity=0.120 Sum_probs=156.8
Q ss_pred CCCCC--CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH--
Q psy14428 200 HEYAN--IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-- 275 (583)
Q Consensus 200 ~~Y~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-- 275 (583)
+.|+. ..+...|+++||++.+. +++++ ++|+++|+..+ +..++++||+|++++|.|.++...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~~--------~~~~~--~~sG~~Ai~~~---l~all~~GD~Vvv~~~~Y~~t~~l~~~ 119 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEGG--------AGTAL--YPSGAAAISNA---LLSFLKAGDHLLMVDSCYEPTRDLCDK 119 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHHhCCCCEEEEECCCcHHHHHHHHH
Confidence 44665 33457999999998643 36788 99999999985 3345667999999999998887543
Q ss_pred --hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCC
Q psy14428 276 --TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYL 353 (583)
Q Consensus 276 --~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~ 353 (583)
+..|+++..++. . +.+.+++.+ .++++++++++|+||||.+ .++++|+++|+++++++|+|++|.
T Consensus 120 ~l~~~Gi~v~~v~~---~----~~e~l~~~l---~~~TklV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a 186 (394)
T PRK09028 120 ILKGFGIETTYYDP---M----IGEGIRELI---RPNTKVLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWA 186 (394)
T ss_pred hhhhcceEEEEECC---C----CHHHHHHhc---CcCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCcc
Confidence 456887776643 1 345666665 5789999999999999765 678889999999999999999997
Q ss_pred CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc-cccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHH
Q psy14428 354 GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARI 432 (583)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~ 432 (583)
.-..-. ++ ..+--+++.|.+|.+ |-.++..|+++. . +++.+++.........+.++...+.
T Consensus 187 ~p~~~~------Pl-----~~GaDivv~S~tK~l~Gh~d~~~G~~~~--~-----~~~~~~l~~~~~~~G~~~~p~~a~l 248 (394)
T PRK09028 187 SPINSR------PF-----EMGVDISIQAATKYIVGHSDVMLGTATA--N-----EKHWDQLREHSYLMGQCTSPDDVYL 248 (394)
T ss_pred ccccCC------cc-----ccCceEEEEeCCeEecCCCCEEEEEEEC--C-----HHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 532111 11 234569999999999 444677786654 3 3567777766666778889999888
Q ss_pred HHHHhCC--hhhhhhhhhHHHHHHHHH
Q psy14428 433 VTEILSD--PKLKAQCDETERIMSQLK 457 (583)
Q Consensus 433 ~~~~l~~--~~~~~~~~~~~~~~~~l~ 457 (583)
+..-++. -.+++|.++...+.+.++
T Consensus 249 ~~rgl~TL~lR~~~~~~na~~la~~L~ 275 (394)
T PRK09028 249 AMRGLRTLGVRLAQHEKNALKVANWLA 275 (394)
T ss_pred HHcccCcHHHHHHHHHHHHHHHHHHHh
Confidence 8888885 356666666666555554
No 191
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.68 E-value=1.4e-14 Score=154.80 Aligned_cols=237 Identities=14% Similarity=0.050 Sum_probs=147.4
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccC-CC-----CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LD-----HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~-----~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+.++|+..++- |.. +.|.+.+++.+..... .. ..|.+..-..+|++.+|+++.. ++.+++
T Consensus 46 ~~~~~~~s~dyl---gl~-~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-------~~~~~~-- 112 (407)
T PRK09064 46 REVTVWCSNDYL---GMG-QHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-------EAALVF-- 112 (407)
T ss_pred ceEEEEECCCCc---CCC-CCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-------CcEEEE--
Confidence 456777766553 322 3467877777665431 11 1233444567788888887741 356666
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC-CCcEEEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-ERSILFL 315 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-~~~~~i~ 315 (583)
++|. ++...+..++... .+++.|+.....+......++..|+++..++. .|++.+++.++... +++++++
T Consensus 113 ~sG~-~an~~ai~~l~~~-~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~ 183 (407)
T PRK09064 113 TSGY-VSNDATLSTLAKL-IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIA 183 (407)
T ss_pred CcHH-HHHHHHHHHHhCC-CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEE
Confidence 6664 3433321121111 24676666665566665666667777655543 16778877775433 4678999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-cCcEEEEecCcccccccCccc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l~GlRi 394 (583)
+++++||+|.+.+ +++|.++|++++++||+||+|..-.++.. . ..+....+. .+..|+++||||.||++|
T Consensus 184 ~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~--g-~g~~~~~~~~~~~div~~t~sKa~g~~G--- 254 (407)
T PRK09064 184 FESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPR--G-GGIAERDGLMDRIDIIEGTLAKAFGVMG--- 254 (407)
T ss_pred EeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCC--C-CChHHhcCCCCCCeEEEEecchhhhccC---
Confidence 9999999998887 66778889999999999999973333321 1 112222121 234788999999999888
Q ss_pred eEEEEEcCCchhHHHHHHHHHHHHhcc--ccCCChHHHHHHHHHh
Q psy14428 395 GTFSVLTPTSDETERIMSQLKILIRGF--YSNPPIHGARIVTEIL 437 (583)
Q Consensus 395 G~lv~~~p~~~~~~~li~~l~~~~~~~--~~~~s~~~q~~~~~~l 437 (583)
||+++ + +++++.+....... ..+.++..+.++...+
T Consensus 255 G~~~~--~-----~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al 292 (407)
T PRK09064 255 GYIAG--S-----AALVDAVRSYAPGFIFTTSLPPAIAAAALASI 292 (407)
T ss_pred ceEec--C-----HHHHHHHHHhCccccccCcCCHHHHHHHHHHH
Confidence 99988 6 57888887654332 2234555555554444
No 192
>PRK05939 hypothetical protein; Provisional
Probab=99.67 E-value=7.1e-15 Score=155.69 Aligned_cols=216 Identities=13% Similarity=0.115 Sum_probs=148.5
Q ss_pred CCCCCCCCH---HHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---H
Q psy14428 201 EYANIGGDA---KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---F 274 (583)
Q Consensus 201 ~Y~~~~G~~---~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~ 274 (583)
.|.- .|.| .|.++++++.+.. ..|++ ++ |+.|+..+ +..+.++||+|+++++.|+.+.. .
T Consensus 40 ~Y~r-~g~p~~~~lE~~la~leg~~-------~~v~~--ss-G~~Ai~~~---l~all~~Gd~Vv~~~~~y~~t~~~~~~ 105 (397)
T PRK05939 40 TYAR-QGTPTTAALEAKITKMEGGV-------GTVCF--AT-GMAAIAAV---FLTLLRAGDHLVSSQFLFGNTNSLFGT 105 (397)
T ss_pred CcCC-CCCHHHHHHHHHHHHHhCCC-------eEEEe--CC-HHHHHHHH---HHHHcCCCCEEEECCCccccHHHHHHH
Confidence 3443 3666 9999999988643 24554 44 57888874 44456779999999999986543 4
Q ss_pred HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC
Q psy14428 275 CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG 354 (583)
Q Consensus 275 ~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~ 354 (583)
++..|++++.++.. |++.+++.+ .++++++++++|+||||.+ .++++|+++|+++|++||+|++|..
T Consensus 106 l~~~G~~v~~v~~~-------d~e~l~~~l---~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~ 172 (397)
T PRK05939 106 LRGLGVEVTMVDAT-------DVQNVAAAI---RPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTS 172 (397)
T ss_pred HHhcCCEEEEECCC-------CHHHHHHhC---CCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccc
Confidence 56689999888661 678887777 5788999999999999987 5688899999999999999999853
Q ss_pred C-CCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCch--------hH---------HHHHHHHHH
Q psy14428 355 L-TSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSD--------ET---------ERIMSQLKI 416 (583)
Q Consensus 355 l-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~--------~~---------~~li~~l~~ 416 (583)
. .++. ...+..+++.|+||.++.+|.++|++++ ++.. .. +..+..+.+
T Consensus 173 ~~~~~~------------~~~gaDivv~S~sK~~~g~g~~igg~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T PRK05939 173 PWLFRP------------KDVGASLVINSLSKYIAGHGNALGGAVT--DTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRK 238 (397)
T ss_pred ccccCc------------cccCCEEEEecCeecccCCCCeEEEEEe--cCcccccccccchhhhhhccchhhHHHHHHHH
Confidence 2 2211 1125679999999999989999999988 4211 00 000122221
Q ss_pred -HHhccccCCChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHH
Q psy14428 417 -LIRGFYSNPPIHGARIVTEILSD--PKLKAQCDETERIMSQLK 457 (583)
Q Consensus 417 -~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~ 457 (583)
..+......++...+.+..-++. -.++++.++...+.+.++
T Consensus 239 ~~~~~~G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~ 282 (397)
T PRK05939 239 KGLRDMGATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLE 282 (397)
T ss_pred HHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHH
Confidence 22344556677777766666664 345566555555544443
No 193
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.67 E-value=1.6e-14 Score=154.28 Aligned_cols=236 Identities=12% Similarity=0.051 Sum_probs=148.9
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCC-----CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLD-----HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~-----~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+.++|+..++- |.. ..|.+.+++.+..+. +.. ..|....-..+|++++|++++. ++.+++
T Consensus 45 ~~~~~~~sn~yl---gl~-~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-------~~~l~~-- 111 (402)
T TIGR01821 45 KDVTVWCSNDYL---GMG-QHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-------ESALVF-- 111 (402)
T ss_pred eeEEEeEccCcC---CCC-CCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-------CeEEEE--
Confidence 346777766653 222 456777777666654 111 0122233357788888888752 234554
Q ss_pred cCCchhHHHHHHHHHHHhC--CCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC-CCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFY--PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-ERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~--~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-~~~~~ 313 (583)
++| ++|...+ +..+. .+++.|+.....+......++..|+++..++. .|++.+++.++... +++++
T Consensus 112 ~sG-~~an~~a---i~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~ 180 (402)
T TIGR01821 112 TSG-YVANDAT---LATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKI 180 (402)
T ss_pred Cch-HHHHHHH---HHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeE
Confidence 554 6666553 22222 24777766655666666667777877655543 16677777775443 35789
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-cCcEEEEecCcccccccCc
Q psy14428 314 FLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGLYGE 392 (583)
Q Consensus 314 i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l~Gl 392 (583)
+++++|+||||.+.+ +++|.++|+++++++|+||+|..-.++.. .. .+....+. .+..|+++||||.||++|
T Consensus 181 v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~--g~-g~~~~~~~~~~~div~~t~sKa~g~~G- 253 (402)
T TIGR01821 181 IAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPR--GG-GIAERDGLMHRIDIIEGTLAKAFGVVG- 253 (402)
T ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCC--CC-ccchhccCCCCCeEEEEechhhhccCC-
Confidence 999999999999987 66778889999999999999983333321 01 11111111 123688999999999989
Q ss_pred cceEEEEEcCCchhHHHHHHHHHHHHhcc--ccCCChHHHHHHHHHhC
Q psy14428 393 RVGTFSVLTPTSDETERIMSQLKILIRGF--YSNPPIHGARIVTEILS 438 (583)
Q Consensus 393 RiG~lv~~~p~~~~~~~li~~l~~~~~~~--~~~~s~~~q~~~~~~l~ 438 (583)
||+++ + +++++.+....... ..+.++..+.++.+.++
T Consensus 254 --G~i~~--~-----~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~ 292 (402)
T TIGR01821 254 --GYIAA--S-----RKLIDAIRSYAPGFIFTTSLPPAIAAGATASIR 292 (402)
T ss_pred --ceeec--C-----HHHHHHHHHhCcCceecCcCCHHHHHHHHHHHH
Confidence 99988 6 57888887654432 23456666776666554
No 194
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.67 E-value=6.8e-15 Score=157.76 Aligned_cols=215 Identities=16% Similarity=0.187 Sum_probs=135.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCC---CCC---CHHH----HHHHHHHHhCCCCCCCCCCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYAN---IGG---DAKF----CKLAAQLAYGEDFPAFKDNR 231 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~---~~G---~~~L----r~aia~~~~~~~g~~~~~~~ 231 (583)
+.+.++|..++.. +++.+.+++..........+++. ..| ...+ |+.++++++ . +..+
T Consensus 24 ~~~~~~l~~~~n~-------~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g----~--~~~~ 90 (416)
T PRK00011 24 QEEHIELIASENF-------VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG----A--EYAN 90 (416)
T ss_pred HhcCeeeecccCc-------CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC----C--Ccee
Confidence 4566888776642 45778887655432110001110 012 1222 224455543 2 3455
Q ss_pred eEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH-----HHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 232 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR-----FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 232 I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~-----~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
|++ ++| ++|+..+ +..+..+||+|++++|+|..+.. .+...|++++.+++ +++++.+|++.+++.+..
T Consensus 91 i~~--~sg-t~al~~~---l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~~ 163 (416)
T PRK00011 91 VQP--HSG-SQANAAV---YFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGV-DEETGLIDYDEVEKLALE 163 (416)
T ss_pred eec--CCc-hHHHHHH---HHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCc-CcccCCcCHHHHHHHHHh
Confidence 665 665 6688764 44556779999999999976432 22345678888888 544578999999998842
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
.+++++++++++||+ .. .+++|.++|+++|++||+|++|. ++.+.+. .+..+ + ...+++.||||
T Consensus 164 --~~~k~v~~~~~~~~~--~~---~~~~I~~la~~~~~~livD~a~~~g~~~~g~--~~~~~----~--~~di~~~S~~K 228 (416)
T PRK00011 164 --HKPKLIIAGASAYSR--PI---DFKRFREIADEVGAYLMVDMAHIAGLVAAGV--HPSPV----P--HADVVTTTTHK 228 (416)
T ss_pred --cCCCEEEECCCcCCC--cc---CHHHHHHHHHHcCCEEEEECcchhcccccCc--cCCCC----C--CCcEEEecCCc
Confidence 256777777666653 33 36788999999999999999974 3332221 01111 1 22477999999
Q ss_pred cccccCccceEEEEEcCCchhHHHHHHHHHHHHh
Q psy14428 386 NMGLYGERVGTFSVLTPTSDETERIMSQLKILIR 419 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~ 419 (583)
.+ +|.|.||+++ ++ +++++++.+...
T Consensus 229 ~l--~g~~gg~i~~--~~----~~~~~~l~~~~~ 254 (416)
T PRK00011 229 TL--RGPRGGLILT--ND----EELAKKINSAVF 254 (416)
T ss_pred CC--CCCCceEEEe--CC----HHHHHHHHHHhC
Confidence 76 7999999999 64 367777776543
No 195
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.67 E-value=7.3e-15 Score=153.88 Aligned_cols=192 Identities=12% Similarity=0.122 Sum_probs=130.5
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEE
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 283 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 283 (583)
+.....+|++++|++.+ .+++++ ++|+++|+.++ +. ++++||+|+++.+.|......+.....+-
T Consensus 52 ~~p~~~~le~~lA~leg--------~~~~v~--~~sG~aAi~~~---l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~- 116 (364)
T PRK07269 52 KNPTRAKLEETLAAIES--------ADYALA--TSSGMSAIVLA---FS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG- 116 (364)
T ss_pred CCccHHHHHHHHHHHhC--------CCeEEE--eCCHHHHHHHH---HH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-
Confidence 44567899999999985 357888 99999999985 33 34669999999999987665544321110
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.+.. ++..|++.+++.+ .++++++++++|+||||.+. ++++|+++|+++++++|+|++|..-.+..
T Consensus 117 ~~~~----~~~~d~~~l~~~i---~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~~---- 182 (364)
T PRK07269 117 RFHF----TYANTEEELIAAI---EEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQR---- 182 (364)
T ss_pred cEEE----EecCCHHHHHHhc---CcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccCC----
Confidence 1111 1234788888877 56889999999999999877 56777888999999999999975432221
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
++.. +--|++.|++|.++-+|- =.|++++ .+ +++.+++.........+.+++..+.+..-|
T Consensus 183 --pl~~-----gaDivv~S~tK~l~g~~d~~gG~v~~--~~----~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L 244 (364)
T PRK07269 183 --PIEL-----GADIVLHSATKYLSGHNDVLAGVVVT--ND----LELYEKLFYNLNTTGAVLSPFDSYLLMRGL 244 (364)
T ss_pred --chhh-----CCcEEEecCceeccCCCcccceEEEe--Cc----HHHHHHHHHHHHHhCCCCCHHHHHHHHcCC
Confidence 2211 234899999999974443 4577776 54 356776664443333344554444444333
No 196
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.67 E-value=1.8e-15 Score=154.53 Aligned_cols=170 Identities=12% Similarity=0.004 Sum_probs=129.2
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEE
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 283 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 283 (583)
|..-+.++++.+|++++. .+-+++ |+|+++++..+ +..++.+||+|+++.|+|......+...|++++
T Consensus 57 ~~g~i~~~~~~~A~~~ga-------~~~~~~--~~Gst~a~~~~---l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~ 124 (294)
T cd00615 57 PTGPIKEAQELAARAFGA-------KHTFFL--VNGTSSSNKAV---ILAVCGPGDKILIDRNCHKSVINGLVLSGAVPV 124 (294)
T ss_pred CChHHHHHHHHHHHHhCC-------CCEEEE--cCcHHHHHHHH---HHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEE
Confidence 333367888999998863 234556 89999998874 445667799999999999999999999999999
Q ss_pred EEecccCCC-----CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC-CCC
Q psy14428 284 AYRYFDNKT-----NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG-LTS 357 (583)
Q Consensus 284 ~v~~~d~~~-----~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~-l~~ 357 (583)
.++. +.+. .++|++.+++.+++ .++++++++++| ||||.+++ +++|+++|++++++||+||+|.. +.+
T Consensus 125 ~v~~-~~~~~~~~~~~i~~~~l~~~l~~-~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~ 198 (294)
T cd00615 125 YLKP-ERNPYYGIAGGIPPETFKKALIE-HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRF 198 (294)
T ss_pred EecC-ccCcccCcCCCCCHHHHHHHHHh-CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhcc
Confidence 8876 3221 37899999998854 246788888898 79999997 56788999999999999999974 444
Q ss_pred CCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 358 GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
.+. . +.. ....+..+++.|++|++ +|+|.|+++.
T Consensus 199 ~~~---~-~~~--~~~~~~div~~S~hK~l--~g~~~~~~l~ 232 (294)
T cd00615 199 HPI---L-PSS--AAMAGADIVVQSTHKTL--PALTQGSMIH 232 (294)
T ss_pred Ccc---c-Ccc--hhhcCCcEEEEchhccc--chHhHHHHHH
Confidence 331 1 111 12246789999999975 8999866654
No 197
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.66 E-value=2.1e-14 Score=151.47 Aligned_cols=177 Identities=16% Similarity=0.088 Sum_probs=128.6
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh--HHHHhhcCCeEEE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH--VRFCTDSRLNVGA 284 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~ 284 (583)
-..++|+.++++++. +-.++.|++ |.++++++..+ +..+..+||.|++++++|... ...++..|++++.
T Consensus 38 ~~~~~~~~l~~l~~~----~~~~~~i~~--~~~gt~~l~~~---~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~ 108 (368)
T PRK13479 38 LTASVRAKLVAIATG----EEGYTCVPL--QGSGTFSVEAA---IGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVV 108 (368)
T ss_pred HHHHHHHHHHHHhCC----CCCceEEEE--cCCcHHHHHHH---HHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEE
Confidence 457788888887752 112356888 99999999985 344455689999998887655 4777889999999
Q ss_pred EecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCch
Q psy14428 285 YRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDA 364 (583)
Q Consensus 285 v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~ 364 (583)
+++ ++ ++++|++.+++.+.. .++.+++++++|+||||...+. ++|.++|++++++||+|+ |..+... +
T Consensus 109 i~~-~~-~~~~d~~~l~~~l~~-~~~~~~v~~~~~~~~tG~~~~~---~~i~~l~~~~~~~livDa-~~~~g~~-----~ 176 (368)
T PRK13479 109 LDT-GE-DEPPDAAEVEAALAA-DPRITHVALVHCETTTGILNPL---DEIAAVAKRHGKRLIVDA-MSSFGAI-----P 176 (368)
T ss_pred EEC-CC-CCCCCHHHHHHHHHh-CCCCcEEEEEcccCccccccCH---HHHHHHHHHcCCEEEEEc-ccccCCc-----c
Confidence 998 43 357899999988854 2356788899999999999884 567888899999999995 4444321 1
Q ss_pred HHHHHHHHhcCcEEEEecCcccc-cccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 365 FSLRYFAKEVGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 365 ~~~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
..+.. .+.-+++.|++|.+ |.+| +||+++ + +++++++...
T Consensus 177 ~~~~~----~~~d~~v~s~~K~l~g~~G--~G~l~~--~-----~~~~~~~~~~ 217 (368)
T PRK13479 177 IDIAE----LGIDALISSANKCIEGVPG--FGFVIA--R-----RSELEACKGN 217 (368)
T ss_pred ccccc----cCceEEEecCccccccCCC--ceEEEE--C-----HHHHHHhhcC
Confidence 12221 12236678999965 6778 599999 6 5677776653
No 198
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=1.1e-14 Score=155.58 Aligned_cols=215 Identities=14% Similarity=0.124 Sum_probs=148.4
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh----HHHHhhcCCeE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH----VRFCTDSRLNV 282 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~ 282 (583)
-...|.+.+|++.+. +..++ +++|++|+..+ +..+..+||+|++++|.|+.. ...++..|+++
T Consensus 65 ~~~~Le~~lA~leg~--------~~al~--~~sG~~Ai~~a---l~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v 131 (431)
T PRK08248 65 TTDVFEKRIAALEGG--------IGALA--VSSGQAAITYS---ILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITV 131 (431)
T ss_pred hHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEE
Confidence 357888899998853 34566 88899999885 334456799999999988654 34456789999
Q ss_pred EEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC
Q psy14428 283 GAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 283 ~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~ 362 (583)
+.++. + |++.+++.+ .++++++++++|+||||.+++. ++|+++|++++++||+|++|..- +.
T Consensus 132 ~~vd~-~------d~e~l~~ai---~~~tklV~l~sp~NPtG~v~di---~~I~~la~~~gi~vIvD~t~a~~-~~---- 193 (431)
T PRK08248 132 KFVDP-S------DPENFEAAI---TDKTKALFAETIGNPKGDVLDI---EAVAAIAHEHGIPLIVDNTFASP-YL---- 193 (431)
T ss_pred EEECC-C------CHHHHHHhc---CCCCeEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEeCCCCcc-cc----
Confidence 88876 1 778888777 5678899999999999999985 46788899999999999998621 11
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhH---------------------H-----H-HHHHHH
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDET---------------------E-----R-IMSQLK 415 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~---------------------~-----~-li~~l~ 415 (583)
..++ ..+..+++.|++|.+|.+|.++|++++........ + . +.+...
T Consensus 194 -~~pl-----~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (431)
T PRK08248 194 -LRPI-----EHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARV 267 (431)
T ss_pred -CChh-----HcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHH
Confidence 1122 23567889999999999999999988832210000 0 0 011122
Q ss_pred HHHhccccCCChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHHH
Q psy14428 416 ILIRGFYSNPPIHGARIVTEILSD--PKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 416 ~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~~ 458 (583)
..........++...+.+.+-++. -.+++|.++..++.+.++.
T Consensus 268 ~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~ 312 (431)
T PRK08248 268 QLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEE 312 (431)
T ss_pred HHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHh
Confidence 233344566677777777776764 4566666666655555543
No 199
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.65 E-value=2e-14 Score=151.16 Aligned_cols=212 Identities=14% Similarity=0.042 Sum_probs=150.3
Q ss_pred CCCCCCCCC---HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH--
Q psy14428 200 HEYANIGGD---AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF-- 274 (583)
Q Consensus 200 ~~Y~~~~G~---~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~-- 274 (583)
+.|+. .|. ..|++++|++.+. +++++ ++|+++|+..+ +..+..+||.|++++|.|......
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~g~--------~~~~~--~~sG~~Ai~~a---l~all~~GD~Vl~~~~~y~~t~~~~~ 107 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELEGG--------AGCYL--YPSGLAAVTNS---ILAFVKAGDHVLMVDSAYEPTRYFCD 107 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHhCC--------CcEEE--ECcHHHHHHHH---HHHhcCCCCEEEEcCCCcHHHHHHHH
Confidence 44663 555 5999999998753 57888 99999999985 344567799999999999877653
Q ss_pred --HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccC
Q psy14428 275 --CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY 352 (583)
Q Consensus 275 --~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y 352 (583)
++..|+++..++. . +.+.+++.+ .++++++++.+|+||||.+ .++++|+++|+++++++|+|++|
T Consensus 108 ~~~~~~gi~v~~~d~---~----~~e~l~~~i---~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~ 174 (377)
T TIGR01324 108 IVLKRMGVDITYYDP---L----IGEDIATLI---QPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTW 174 (377)
T ss_pred HHHHhcCcEEEEECC---C----CHHHHHHhc---CCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCC
Confidence 3556887766643 1 225566655 6789999999999999754 67888899999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc-CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHH
Q psy14428 353 LGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY-GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGAR 431 (583)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~-GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~ 431 (583)
..-.... ++ ..+--|++.|++|.++-+ +...|++++ . +++++++.........+.++...+
T Consensus 175 a~g~~~~------pl-----~~gaDivv~S~tK~l~G~~d~~gG~v~~--~-----~~~~~~l~~~~~~~G~~l~p~~a~ 236 (377)
T TIGR01324 175 AAGLLFK------PL-----EHGVDISIQAGTKYLVGHSDIMIGTVVA--N-----ARTWDQLREHSYLMGQMVDADDAY 236 (377)
T ss_pred ccccccC------cc-----ccCceEEEecCceeccCCCCceEEEEEe--C-----HHHHHHHHHHHHHhCCCCCHHHHH
Confidence 7533221 11 234568999999999644 478898887 5 356676665545555666777777
Q ss_pred HHHHHhCC--hhhhhhhhhHHHHHHHH
Q psy14428 432 IVTEILSD--PKLKAQCDETERIMSQL 456 (583)
Q Consensus 432 ~~~~~l~~--~~~~~~~~~~~~~~~~l 456 (583)
.+...++. -.++++..+..++.+.+
T Consensus 237 ~~~rgl~tl~~R~~~~~~~a~~la~~L 263 (377)
T TIGR01324 237 TTLRGLRTLGVRLKQHQESSLAIAKWL 263 (377)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 67666664 24555555544444444
No 200
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.65 E-value=3.3e-14 Score=151.73 Aligned_cols=241 Identities=11% Similarity=0.060 Sum_probs=154.7
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
+...+|+..|.+....|. -.+.+.+++.+.++.. ....+....-..+|.+.++++.. .+++++ +++|
T Consensus 40 g~~~lD~~~~~~~~~~Gh--~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--------~~~~~~--~~SG 107 (401)
T PRK00854 40 GNRYLDCLSAYSAVNQGH--CHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTG--------SHKVLP--MNSG 107 (401)
T ss_pred CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC--------CCEEEE--eCCc
Confidence 445677776665544443 2366777776666542 11111223334556666665532 257888 9999
Q ss_pred hhHHHHHHHHHHHh-----C-CCC-CEEEEcCCCChhhHHHHhhcCC-------------eEEEEecccCCCCCCChhhH
Q psy14428 241 SGSLRVGTAFLERF-----Y-PGV-KTVYFPTPTWNGHVRFCTDSRL-------------NVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~-----~-~~g-d~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~d~~~~g~d~~~l 300 (583)
++|++.+..+++.. . ++| ++|++.+-+|......+...+. .+..+|. .|++.+
T Consensus 108 s~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 180 (401)
T PRK00854 108 AEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEAL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence 99999875555432 0 123 6788887777664333222221 2222322 277888
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDLSE-DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~s~-~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
++.+ .++++++++++|+||||.++++ +.+++|.++|++||+++|+||+|.++.+.+ ..... ...+....+++
T Consensus 181 e~~i---~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g---~~~~~-~~~g~~~D~~~ 253 (401)
T PRK00854 181 EAAI---TPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTG---KLLAE-EHEGIEADVTL 253 (401)
T ss_pred HHHh---CCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---hHhHH-hhcCCCCCEEE
Confidence 8877 5678999999999999999985 469999999999999999999998876654 11111 11111222333
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+||.++...+|+||+++ + +++++.+........++.+++.|.++...|+
T Consensus 254 ---~~K~l~gg~~~ig~v~~--~-----~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~ 302 (401)
T PRK00854 254 ---IGKALSGGFYPVSAVLS--N-----SEVLGVLKPGQHGSTFGGNPLACAVARAALK 302 (401)
T ss_pred ---ecccccCCccCeEEEEE--c-----HHHHhcccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 47999743479999999 6 5788877654444556779999998888775
No 201
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.65 E-value=5.1e-15 Score=160.18 Aligned_cols=208 Identities=13% Similarity=0.105 Sum_probs=140.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCC--CCHHHHHHHHHHH---hCCCCCCCCCCCeEEEecC
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIG--GDAKFCKLAAQLA---YGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~--G~~~Lr~aia~~~---~~~~g~~~~~~~I~i~~t~ 238 (583)
....++.|.++.. .+..+..+.... + ....|.+.+ -...++++++++. .+..|. +++++.+ |+
T Consensus 69 ~~~~lg~g~~~~~-----~p~~~~~~~~~~--~-~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~--~~~~v~~--~~ 136 (447)
T PRK00451 69 YPSFLGAGAYDHY-----IPAVVDHIISRS--E-FYTAYTPYQPEISQGTLQAIFEYQTMICELTGM--DVANASM--YD 136 (447)
T ss_pred CcccCcccccCCc-----CcHHHHHHHhch--h-HHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC--CcceEEe--cC
Confidence 5667888887532 344555443222 1 123465511 1234666666433 555554 4568999 99
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEE
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
|+++++..+ ++.....+||+|++++|.|+.+...++. .|++++.+|+ ++ + .+|++.+++.+ .++++++
T Consensus 137 g~t~~~~~~--~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~-~~-~-~~d~~~l~~~i---~~~t~~v 208 (447)
T PRK00451 137 GATALAEAA--LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY-ED-G-VTDLEALEAAV---DDDTAAV 208 (447)
T ss_pred cHHHHHHHH--HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC-CC-C-CCCHHHHHHhc---CCCeEEE
Confidence 999998875 3222234599999999999988877665 6999999998 54 3 78999998887 5678999
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE--eccCCCCCCCCCCCchHHHHHHHHhcCcEEEEe---cCcccccc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFF--DMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQ---SFSKNMGL 389 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~--De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~---S~SK~~~l 389 (583)
++++| ||||.+.+ +++|.++|+++|+++|+ |.+...+.. . ....+..+++. +|||.+++
T Consensus 209 ~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~------~------~~~~~~D~~~~s~~k~~~~~~~ 272 (447)
T PRK00451 209 VVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLK------P------PGEYGADIVVGEGQPLGIPLSF 272 (447)
T ss_pred EEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCC------C------cccCCCCEEEECCCcCCCCCCC
Confidence 99999 99999864 77778899999999888 433211110 0 01123334444 79999999
Q ss_pred cCccceEEEEEcCCchhHHHHHHHH
Q psy14428 390 YGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 390 ~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
.|+|+||+++ + +++++.+
T Consensus 273 ~Gpg~G~l~~--~-----~~~~~~~ 290 (447)
T PRK00451 273 GGPYLGFFAT--R-----KKLVRQM 290 (447)
T ss_pred CCCCchHHHh--h-----HHHHhhC
Confidence 9999999998 6 4677763
No 202
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=5.8e-15 Score=156.77 Aligned_cols=209 Identities=15% Similarity=0.120 Sum_probs=152.1
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcCCeE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSRLNV 282 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~ 282 (583)
-...|.+.+|++.+.. ..++ +++|+.|+.++ +..++++||+|+++.++|...... +...|+++
T Consensus 62 tv~~lE~~la~leg~~--------~av~--~~SG~aAi~~a---l~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v 128 (432)
T PRK06702 62 TLAAFEQKLAELEGGV--------GAVA--TASGQAAIMLA---VLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV 128 (432)
T ss_pred HHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH---HHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEE
Confidence 3678899999988653 3566 99999999985 334467799999999999877665 67789998
Q ss_pred EEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC
Q psy14428 283 GAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 283 ~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~ 362 (583)
..++. .+|++.+++++ ++++++|++.+|+|||+.+.+ +++|+++|+++|+++|+|++|.-
T Consensus 129 ~~vd~------~~d~~~l~~~I---~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t-------- 188 (432)
T PRK06702 129 TFFNP------NLTADEIVALA---NDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT-------- 188 (432)
T ss_pred EEECC------CCCHHHHHHhC---CcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc--------
Confidence 88754 24888888887 678899999999999999998 77778889999999999999831
Q ss_pred chHHHHHHHHhcCcEEEEecCcc-----cccccCccc-----eEEEEEcCCchhHHHHHH--------------------
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSK-----NMGLYGERV-----GTFSVLTPTSDETERIMS-------------------- 412 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK-----~~~l~GlRi-----G~lv~~~p~~~~~~~li~-------------------- 412 (583)
+.+.. +-..+--|++.|+|| ..++.|+++ +|..+ ++. ++++
T Consensus 189 --P~~~~-pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~--~~~----~l~~~~~~~~~~~~~~~~~~~~~~ 259 (432)
T PRK06702 189 --PYLCQ-AFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNG--KYP----ELVEPDPSYHGVSYVQNFGAAAYI 259 (432)
T ss_pred --hhhCC-hhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccc--ccc----ccccccccccccchhhccchhhHH
Confidence 11111 112344599999999 888999998 67765 432 2221
Q ss_pred --HHHHHHhccccCCChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHH
Q psy14428 413 --QLKILIRGFYSNPPIHGARIVTEILSD--PKLKAQCDETERIMSQLK 457 (583)
Q Consensus 413 --~l~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~ 457 (583)
......+....+.+++..+.+...|+. ..++++.++...+.+.++
T Consensus 260 ~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~ 308 (432)
T PRK06702 260 VKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLA 308 (432)
T ss_pred HHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHH
Confidence 111233445668899999999988885 345555555555544444
No 203
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.65 E-value=1.7e-14 Score=152.17 Aligned_cols=213 Identities=16% Similarity=0.144 Sum_probs=146.5
Q ss_pred CCCCCCC--CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH---
Q psy14428 200 HEYANIG--GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF--- 274 (583)
Q Consensus 200 ~~Y~~~~--G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~--- 274 (583)
+.|.... -..+|++.++++++. +++++ +++++.++.++ +. ++.+||+|++++|.|..+...
T Consensus 39 ~~Y~r~~~p~~~~le~~la~l~g~--------~~~l~--~~sG~~al~~~---l~-ll~~Gd~Vl~~~~~y~~~~~~~~~ 104 (378)
T TIGR01329 39 YDYTRSGNPTRTALESLLAKLDKA--------DRAFA--FSSGMAALDVI---TR-LLNNGDEIIAGDDLYGGTDRLLTQ 104 (378)
T ss_pred CccCCCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HH-HhCCCCEEEEcCCCchHHHHHHHH
Confidence 4465432 145677777776642 45566 66667788764 33 456799999999999887654
Q ss_pred -HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCC
Q psy14428 275 -CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYL 353 (583)
Q Consensus 275 -~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~ 353 (583)
++..|++++.+++ + |++.+++.+ .++++++++++|+||||.+.+ +++|+++|+++++++|+|+++.
T Consensus 105 ~~~~~G~~v~~vd~-~------d~~~le~~i---~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~ 171 (378)
T TIGR01329 105 VVPRSGVVVVHVDT-T------DLDKVKAAL---GPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMM 171 (378)
T ss_pred HHHHcCcEEEEeCC-C------CHHHHHHhc---CcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCc
Confidence 4557999998876 1 678888777 578899999999999999886 7777889999999999999974
Q ss_pred CCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc-CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHH
Q psy14428 354 GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY-GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARI 432 (583)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~-GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~ 432 (583)
.-... .++. .+--+++.|++|.++-+ +++.|++++ .+ +.+.+++.........+.++...+.
T Consensus 172 ~~~~~------~~l~-----~g~Di~v~S~tK~l~G~~~~~~G~v~~--~~----~~~~~~~~~~~~~~G~~~~~~~a~l 234 (378)
T TIGR01329 172 SPLLC------NPLE-----LGADIVYHSATKFLAGHSDVMAGVLAV--KG----EEIAKKVYFLQNSTGSGLAPFDCWL 234 (378)
T ss_pred ccccC------Chhh-----cCCcEEEEecceeccCCccceeEEEEe--Cc----HHHHHHHHHHHHhcCCcCCHHHHHH
Confidence 32211 1221 13358999999988643 588999998 54 3566777766655556666666655
Q ss_pred HHHHhCC--hhhhhhhhhHHHHHHHH
Q psy14428 433 VTEILSD--PKLKAQCDETERIMSQL 456 (583)
Q Consensus 433 ~~~~l~~--~~~~~~~~~~~~~~~~l 456 (583)
+..-++. ..++++..+...+.+.+
T Consensus 235 ~~~~l~tl~~R~e~~~~na~~la~~L 260 (378)
T TIGR01329 235 LLRGIKTLAIRIEKQQENARAIAMFL 260 (378)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHH
Confidence 5555543 23444444444444443
No 204
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=1.7e-14 Score=152.90 Aligned_cols=201 Identities=15% Similarity=0.172 Sum_probs=139.0
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH----HHHhhcCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV----RFCTDSRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~ 283 (583)
...|++.+|++.+.. +.+++ ++| +.++.++ +. +..+||+|++++|.|+... ..++..|++++
T Consensus 56 ~~~le~~lA~l~g~~-------~~v~~--~sG-~~ai~~~---l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~ 121 (390)
T PRK08064 56 REALEDIIAELEGGT-------KGFAF--ASG-MAAISTA---FL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHT 121 (390)
T ss_pred HHHHHHHHHHHhCCC-------CeEEE--CCH-HHHHHHH---HH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEE
Confidence 578999999998632 34665 665 5577764 33 4456999999999987433 45566899999
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.+++ + |++.+++.+ .++++++++++|+||||.+.+ +++|.++|+++++++|+|++|.......
T Consensus 122 ~v~~-~------d~~~l~~~l---~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~---- 184 (390)
T PRK08064 122 FVDM-T------NLEEVAQNI---KPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQK---- 184 (390)
T ss_pred EECC-C------CHHHHHHhc---CCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccC----
Confidence 8876 1 677777766 567899999999999999986 5566788899999999999997654321
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccc-cCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC--h
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGL-YGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD--P 440 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l-~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~--~ 440 (583)
++ . .+..+++.|+||.++- +|...|++++ .+ +++++++...........++...+.+..-+++ .
T Consensus 185 --~~-~----~g~Divv~S~tK~~~G~~~~laG~~v~--~~----~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~tl~~ 251 (390)
T PRK08064 185 --PL-D----LGADVVLHSATKFLAGHSDVLAGLAVV--KD----EELAQKLYFLQNSFGAVLGVQDCWLVLRGLKTLHV 251 (390)
T ss_pred --ch-h----hCCcEEEeecceeccCCccceeEEEEe--CC----HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHH
Confidence 11 1 2356889999999853 4467788777 44 47888888776655555555555554444442 2
Q ss_pred hhhhhhhhHHHH
Q psy14428 441 KLKAQCDETERI 452 (583)
Q Consensus 441 ~~~~~~~~~~~~ 452 (583)
.++++..+...+
T Consensus 252 R~~~~~~~a~~l 263 (390)
T PRK08064 252 RLEHSSETANKI 263 (390)
T ss_pred HHHHHHHHHHHH
Confidence 334443333333
No 205
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.64 E-value=2.7e-14 Score=150.46 Aligned_cols=188 Identities=13% Similarity=0.145 Sum_probs=134.3
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH----HHhhcCCeE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR----FCTDSRLNV 282 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~ 282 (583)
-...|++.+|++.+.. ..+++ .+| +.++..+ +. ++.+||+|++++|+|+.... .++..|+++
T Consensus 51 ~~~~Le~~lA~l~g~~-------~~~~~--~sG-~aai~~~---~~-~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v 116 (377)
T PRK07671 51 TRAALEELIAVLEGGH-------AGFAF--GSG-MAAITAV---MM-LFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEH 116 (377)
T ss_pred HHHHHHHHHHHHhCCC-------ceEEe--CCH-HHHHHHH---HH-HhCCCCEEEECCCccchHHHHHHHHHhcCCeEE
Confidence 3678999999988632 34555 555 5576653 33 45669999999999984432 345578988
Q ss_pred EEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC
Q psy14428 283 GAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 283 ~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~ 362 (583)
+.++. .|++.+++++ .+++++++++||+||||.+.+ +++|.++|+++++++|+|++|....+..
T Consensus 117 ~~v~~-------~d~~~l~~ai---~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~~--- 180 (377)
T PRK07671 117 TFVDT-------SNLEEVEEAI---RPNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQS--- 180 (377)
T ss_pred EEECC-------CCHHHHHHhc---CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 88764 1778888777 567899999999999998865 6666778899999999999997543321
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ + .+..|++.|+||.++-++ .-.|++++ .+ +++++++...+.......+....+.+..-+.
T Consensus 181 ---p~----~-~g~Divv~S~sK~l~G~~~~~~G~~v~--~~----~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~ 243 (377)
T PRK07671 181 ---PI----S-LGADIVLHSATKYLGGHSDVVAGLVVV--NS----PELAEDLHFVQNSTGGILGPQDSWLLLRGLK 243 (377)
T ss_pred ---hh----h-hCCeEEEecCcccccCCccceeEEEEe--Cc----HHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC
Confidence 11 1 134699999999997554 35566766 44 4688888877766666667776666665544
No 206
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.64 E-value=1e-13 Score=148.33 Aligned_cols=296 Identities=10% Similarity=0.054 Sum_probs=175.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++......+ ..-..+....+|+.+...... ...+++.+ +++|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~~la~~l~~~~p~-~~~~~~~f--~~sG 110 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHR--HPDLVAAVEQQLQQFTHTAY--QIVPYESYVTLAEKINALAPV-SGQAKTAF--FTTG 110 (421)
T ss_pred CCCEEEEccCchhhhcCCCC--CHHHHHHHHHHHHhccCccc--CccCCHHHHHHHHHHHHhCCC-CCCceEEE--eCCh
Confidence 34566888777766656643 46777777666654211111 111223334455555432110 11257888 8899
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-hhcCC-------------eEEEEecccCCCCCCC----hhhHHH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TDSRL-------------NVGAYRYFDNKTNGLD----FAGMME 302 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~-------------~~~~v~~~d~~~~g~d----~~~l~~ 302 (583)
++|.+.+..+.+.... ..+|+...-+|.+..... ...|. .++.+|+.+.. .+++ ++.+++
T Consensus 111 seA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~ 188 (421)
T PRK09792 111 AEAVENAVKIARAHTG-RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIER 188 (421)
T ss_pred HHHHHHHHHHHHHhcC-CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHH
Confidence 9999987666655533 467888888877653211 11110 12333331111 2232 356666
Q ss_pred HHHcC--CCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 303 DIKAM--PERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 303 ~l~~~--~~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
.+++. .++..++++..-++|+|..+ +++.+++|.++|+++++++|+||++.+|.+.+ ...+...+....+
T Consensus 189 ~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~~~~~pD---- 261 (421)
T PRK09792 189 LFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG---KLFAMDHYADKPD---- 261 (421)
T ss_pred HHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHhcCCCCc----
Confidence 66531 23445555544599999876 99999999999999999999999999997765 2334444322222
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHH---HHHHHhCChhhhhhhhhHHHHHH-H
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGAR---IVTEILSDPKLKAQCDETERIMS-Q 455 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~---~~~~~l~~~~~~~~~~~~~~~~~-~ 455 (583)
+.+|||.++ +|+|+||+++ + +++++.+........++.++++|. ++.++++++.+.++.++....+. .
T Consensus 262 i~t~gK~l~-~G~pigav~~--~-----~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~ 333 (421)
T PRK09792 262 LMTMAKSLA-GGMPLSGVVG--N-----ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNT 333 (421)
T ss_pred EEEeehhhc-CCCceEEEEE--c-----HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 689999998 9999999999 6 578877765444456678888998 44555555544443333222222 2
Q ss_pred HHHHHhhc-cCCCccc-hhhHHHHhcC
Q psy14428 456 LKILIRGF-YSNPPIH-GARIVTEILS 480 (583)
Q Consensus 456 l~~~~r~~-~~~~p~~-g~~i~~~~l~ 480 (583)
++.+.+.. ....+.+ |.++|..+..
T Consensus 334 l~~l~~~~p~v~~vrG~Gl~~~ie~~~ 360 (421)
T PRK09792 334 LIDAKESVPAIAAVRGLGSMIAAEFND 360 (421)
T ss_pred HHHHHHhCCCcceecccceEEEEEecC
Confidence 22222111 1123444 8888887754
No 207
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=2.1e-14 Score=153.36 Aligned_cols=157 Identities=17% Similarity=0.137 Sum_probs=118.4
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cCCe
Q psy14428 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SRLN 281 (583)
Q Consensus 206 ~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~ 281 (583)
.-...|++++|++.+. +..++ +++|++|+.++ +..+..+||+|+++.|.|......+.. .|++
T Consensus 58 pt~~~Le~~lA~l~g~--------~~~l~--~ssG~~Ai~~a---l~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 58 PTNDVLEQRVAALEGG--------VGALA--VASGMAAITYA---IQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred chHHHHHHHHHHHhCC--------CceeE--ehhHHHHHHHH---HHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence 3457899999998753 23445 77778999885 444556799999999999865554433 4555
Q ss_pred EEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCC
Q psy14428 282 VGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFD 361 (583)
Q Consensus 282 ~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~ 361 (583)
+..++. .|++.+++.+ .++++++++++|+||||.+++ +++|.++|++++++||+|++|.......
T Consensus 125 v~~~d~-------~d~e~le~ai---~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~~-- 189 (425)
T PRK06084 125 TRFAAH-------DDIAALEALI---DERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLCR-- 189 (425)
T ss_pred EEEECC-------CCHHHHHHHh---ccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 555433 2788888887 457889999999999999998 5777888999999999999997433211
Q ss_pred CchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 362 KDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
++ ..+--|++.|+||.++.+|.++|.+++
T Consensus 190 ----p~-----~~gaDivv~S~tK~l~G~g~~~gG~v~ 218 (425)
T PRK06084 190 ----PF-----EHGADIVVHSLTKYIGGHGTSIGGIVV 218 (425)
T ss_pred ----hh-----hcCCCEEEECchhcccccccceeEEEE
Confidence 11 123459999999999999999999888
No 208
>PLN00144 acetylornithine transaminase
Probab=99.63 E-value=5.3e-14 Score=148.72 Aligned_cols=282 Identities=12% Similarity=0.069 Sum_probs=176.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+... .+.......+....+|+.+.+.. ..+++.. +++|
T Consensus 13 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~---~~~~~~~~~~~~~~la~~l~~~~----~~~~v~f--~~sG 81 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHG--DPDWVKAVAEQAGTL---AHVSNVYHTIPQVELAKRLVASS----FADRVFF--CNSG 81 (382)
T ss_pred CCCEEEECCcCHHhccCCCC--CHHHHHHHHHHHHhc---CCccccccCHHHHHHHHHHHhcC----CCCeEEE--eCCc
Confidence 34566788777665555543 367777776666541 11111111234455555554322 2368999 9999
Q ss_pred hhHHHHHHHHHHHhCCC------------CCEEEEcCCCChhhHHHHhhcCCe-------------EEEEecccCCCCCC
Q psy14428 241 SGSLRVGTAFLERFYPG------------VKTVYFPTPTWNGHVRFCTDSRLN-------------VGAYRYFDNKTNGL 295 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~------------gd~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~d~~~~g~ 295 (583)
++|.+.+..+.+..... ..+|+...-+|.+........... ++.+|. -
T Consensus 82 seA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~ 154 (382)
T PLN00144 82 TEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-------G 154 (382)
T ss_pred HHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-------C
Confidence 99999876655544210 246888888887654332222111 122222 1
Q ss_pred ChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH--HHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh
Q psy14428 296 DFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQ--WRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE 373 (583)
Q Consensus 296 d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~--~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~ 373 (583)
|++.+++.+.. .+...+|+-|. ||| |.+++.+. +++|.++|++||+++|+||+|.+|...+ ...+...+ ..
T Consensus 155 d~~~l~~~~~~-~~~aavi~eP~-q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g---~~~~~~~~-~~ 227 (382)
T PLN00144 155 NLEAARKLIQK-GKTAAVFVEPV-QGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG---YLWAHEAY-GV 227 (382)
T ss_pred CHHHHHHhcCC-CCeEEEEEccc-cCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hHhhhhhc-CC
Confidence 67778776632 23344555566 999 66666555 9999999999999999999999987665 12221111 11
Q ss_pred cCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHH---HHhCChhhhhhhhhHH
Q psy14428 374 VGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVT---EILSDPKLKAQCDETE 450 (583)
Q Consensus 374 ~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~---~~l~~~~~~~~~~~~~ 450 (583)
.+. +.||||.++ +|+|+||+++ + +++++.+........++.+++.+.++. .+++++.+.++.+...
T Consensus 228 ~PD---i~t~sK~l~-~G~pig~v~~--~-----~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g 296 (382)
T PLN00144 228 EPD---IMTLAKPLA-GGLPIGAVLV--T-----EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKG 296 (382)
T ss_pred CCC---EEEeccccc-CCcceEEEEE--c-----HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 122 888999998 9999999999 7 578888765445556788999999888 7777878877777766
Q ss_pred HHHHH-HHHHHhhc--cCCCccchhhHHHHh
Q psy14428 451 RIMSQ-LKILIRGF--YSNPPIHGARIVTEI 478 (583)
Q Consensus 451 ~~~~~-l~~~~r~~--~~~~p~~g~~i~~~~ 478 (583)
+.+.+ ++.++... ....-..|.++|..+
T Consensus 297 ~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l 327 (382)
T PLN00144 297 EYLRELLRRKLGGNPHVKEVRGVGLLVGIQL 327 (382)
T ss_pred HHHHHHHHHHHhhCCCceeeecCceEEEEEe
Confidence 55433 33333322 112223677777766
No 209
>PLN02509 cystathionine beta-lyase
Probab=99.62 E-value=5.8e-14 Score=150.47 Aligned_cols=217 Identities=15% Similarity=0.141 Sum_probs=146.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---- 274 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---- 274 (583)
.+.|+.. |.+ .++++.+++.+..+ .++.++ ++++++++.++ +. +.++||+|++++|.|..+...
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i---l~-ll~~GD~VI~~~~~y~~t~~ll~~~ 191 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV---TH-LIKNGEEIVAGDDVYGGSDRLLSQV 191 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH---HH-HhCCCCEEEEcCCchhhHHHHHHHH
Confidence 4567665 765 57777777766432 456666 77778887653 33 456699999999999988644
Q ss_pred HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC
Q psy14428 275 CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG 354 (583)
Q Consensus 275 ~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~ 354 (583)
+...|++++.++. .|++.+++.+ .++++++++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 192 l~~~G~~v~~vd~-------~d~e~l~~ai---~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~ 258 (464)
T PLN02509 192 VPRSGVVVKRVNT-------TNLDEVAAAI---GPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMS 258 (464)
T ss_pred HHHCCeEEEEeCC-------CCHHHHHHhC---CcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 4567988887754 1677777776 5678999999999999975 6788889999999999999999854
Q ss_pred CCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHH
Q psy14428 355 LTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIV 433 (583)
Q Consensus 355 l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~ 433 (583)
-.... ++ + .+-.+++.|++|.++-+|- =.|.+++ .+ +.+.+++...+.......++...+++
T Consensus 259 ~~~~~------pl----~-~gaDivv~S~tK~l~G~gdv~gG~v~~--~~----~~l~~~~~~~~~~~g~~l~p~~A~l~ 321 (464)
T PLN02509 259 PVLSR------PL----E-LGADIVMHSATKFIAGHSDVMAGVLAV--KG----EKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_pred cccCC------hh----h-cCCcEEEecCcccccCCCccceeEEEe--cc----HHHHHHHHHHHHhcCCCcCHHHHHHH
Confidence 43221 11 1 2345889999999875443 4567765 33 35566655444444444566666666
Q ss_pred HHHhCC--hhhhhhhhhHHHHHHHHH
Q psy14428 434 TEILSD--PKLKAQCDETERIMSQLK 457 (583)
Q Consensus 434 ~~~l~~--~~~~~~~~~~~~~~~~l~ 457 (583)
..-++. ..++++.++...+.+.++
T Consensus 322 lr~L~tL~~R~~r~~~nA~~la~~L~ 347 (464)
T PLN02509 322 LRGIKTMALRIEKQQENARKIAMYLS 347 (464)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 665553 344555555545544443
No 210
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.61 E-value=8.4e-14 Score=147.72 Aligned_cols=222 Identities=14% Similarity=0.126 Sum_probs=147.4
Q ss_pred hHHHHHHHHHhcc------CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCC
Q psy14428 184 PSVKEAERRIYEK------NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG 257 (583)
Q Consensus 184 ~~v~~a~~~~~~~------~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~ 257 (583)
+.++++..+..++ .....|+...+..+|++++|++++. ++.+++ ++|.+..... +..+..+
T Consensus 15 ~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~al~~--~sG~~a~~~~----i~~l~~~ 81 (392)
T PLN03227 15 PTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ESAILY--SDGASTTSST----VAAFAKR 81 (392)
T ss_pred HHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEe--cCcHHHHHHH----HHHhCCC
Confidence 5666666555543 1123377777899999999999974 367777 8877766643 3346777
Q ss_pred CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC--------CCCcEEEEeCCCCCCCCCCCCH
Q psy14428 258 VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--------PERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 258 gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--------~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
||.|+++++.|..+...+...+++++.++..|.+ +++.+.+.+... .++++++++.+++||+|.+.+
T Consensus 82 GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~----~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~- 156 (392)
T PLN03227 82 GDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMK----DLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP- 156 (392)
T ss_pred CCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHH----HHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC-
Confidence 9999999999999988877788887777652111 334443344311 246789999999999999999
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH--HHhcCcEEEEecCcccccccCccceEEEEEcCCchhH
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF--AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDET 407 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~--~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~ 407 (583)
+++|.++|+++|+++|.||+|. +..-+. ........+ ....+..|++.|+||.+| .+.|++++ +
T Consensus 157 --l~~i~~l~~~~g~~livDe~~~-~g~~g~-~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~--~----- 222 (392)
T PLN03227 157 --LKELVALKEEFHYRLILDESFS-FGTLGK-SGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVG--S----- 222 (392)
T ss_pred --HHHHHHHHHHcCCEEEEECccc-ccccCC-CCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEec--C-----
Confidence 5677899999999999999997 443221 001111111 001234788899999664 66799887 5
Q ss_pred HHHHHHHHHHHhccccCC--ChHHHHHHHHHh
Q psy14428 408 ERIMSQLKILIRGFYSNP--PIHGARIVTEIL 437 (583)
Q Consensus 408 ~~li~~l~~~~~~~~~~~--s~~~q~~~~~~l 437 (583)
+++++.++.......++. +++.+.++...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al 254 (392)
T PLN03227 223 EEVVDHQRLSGSGYCFSASAPPFLAKADATAT 254 (392)
T ss_pred HHHHHHHHHhCcCccccCCCCHHHHHHHHHHH
Confidence 577777765433333333 355565555443
No 211
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.61 E-value=1.9e-13 Score=143.80 Aligned_cols=173 Identities=12% Similarity=0.029 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh--HHHHhhcCCeEEEEe
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH--VRFCTDSRLNVGAYR 286 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~ 286 (583)
.++|+.++++++. +-.++.|++ |+|+++++..+ +..+..+||.|++..+++... ...++..|++++.++
T Consensus 38 ~~~r~~la~l~~~----~~~~~~i~~--t~~~t~al~~~---~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~ 108 (363)
T TIGR02326 38 EQIRQQLLALATA----EEGYTSVLL--QGSGTFAVEAV---IGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVD 108 (363)
T ss_pred HHHHHHHHHHhCC----CCCceEEEE--cCCCHHHHHHH---HHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEe
Confidence 4567777777642 111247999 99999999985 334445578877776665444 466788999999999
Q ss_pred cccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH
Q psy14428 287 YFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS 366 (583)
Q Consensus 287 ~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~ 366 (583)
+ ++ +..+|++.+++.+.+. ++.+++.+++++||||..++. ++|.++|+++++++|+|+++. ++. .+..
T Consensus 109 ~-~~-~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~i---~~I~~l~~~~g~~livD~~~~---~g~---~~~~ 176 (363)
T TIGR02326 109 T-GE-VEPPDVVEVEAILAAD-PAITHIALVHCETTTGILNPI---EAVAKLAHRHGKVTIVDAMSS---FGG---IPID 176 (363)
T ss_pred C-CC-CCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccCcH---HHHHHHHHHcCCEEEEEcccc---ccC---cccc
Confidence 8 43 4678999999988642 345678889999999999984 678899999999999998764 222 1122
Q ss_pred HHHHHHhcCcEEEEecCcccc-cccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 367 LRYFAKEVGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 367 ~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
+.. .+--+++.|++|.+ |.+| +||+++ + +++++++.
T Consensus 177 ~~~----~~~D~~~~s~~K~l~~p~G--~G~l~~--~-----~~~~~~~~ 213 (363)
T TIGR02326 177 IAE----LHIDYLISSANKCIQGVPG--FGFVIA--R-----QAELAACK 213 (363)
T ss_pred hhh----cCccEEEecCccccccCCc--ceEEEE--C-----HHHHHHhh
Confidence 322 23347889999987 4456 699999 6 45666543
No 212
>PRK05968 hypothetical protein; Provisional
Probab=99.61 E-value=7.4e-14 Score=147.89 Aligned_cols=205 Identities=14% Similarity=0.080 Sum_probs=143.2
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh----HHHHhhcCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH----VRFCTDSRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~~ 283 (583)
..+|++++|++.+.. ..+ + +++|+.|+.++ +..++.+||+|+++.|+|... ...++..|++++
T Consensus 65 ~~~le~~lA~l~g~~-------~av-~--~~sG~~Ai~~a---l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~ 131 (389)
T PRK05968 65 VRAFEEMLAKLEGAE-------DAR-G--FASGMAAISST---VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVD 131 (389)
T ss_pred HHHHHHHHHHHhCCC-------cEE-E--ECCHHHHHHHH---HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEE
Confidence 578999999998642 234 4 45556788775 334566799999999999864 345666799988
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.++. + |++.+++.+ +++++++++||.|| +++..++++|+++|++++++||+|++|....+..
T Consensus 132 ~vd~-~------d~~~l~~~i----~~tklV~ie~pt~~---~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~---- 193 (389)
T PRK05968 132 YVDG-R------DEEAVAKAL----PGAKLLYLESPTSW---VFELQDVAALAALAKRHGVVTMIDNSWASPVFQR---- 193 (389)
T ss_pred EeCC-C------CHHHHHHhc----ccCCEEEEECCCCC---CCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC----
Confidence 8765 1 677777665 35678888765554 5677899999999999999999999997665432
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHh-ccccCCChHHHHHHHHHhCC--
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIR-GFYSNPPIHGARIVTEILSD-- 439 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~-~~~~~~s~~~q~~~~~~l~~-- 439 (583)
++. .+-.+++.|+||.++.+| ++.|++++ + ++++++++.... ......+.+.++++...++.
T Consensus 194 --p~~-----~g~Divv~S~tK~l~g~~~~~gG~i~~--~-----~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl~ 259 (389)
T PRK05968 194 --PIT-----LGVDLVIHSASKYLGGHSDTVAGVVAG--S-----KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTLP 259 (389)
T ss_pred --chh-----cCCcEEEeeccccccCCCCeEEEEEEE--C-----HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcHH
Confidence 111 123478889999998765 58898887 5 478888776543 34456777778877777764
Q ss_pred hhhhhhhhhHHHHHHHHH
Q psy14428 440 PKLKAQCDETERIMSQLK 457 (583)
Q Consensus 440 ~~~~~~~~~~~~~~~~l~ 457 (583)
..++++.+..+++.+.++
T Consensus 260 ~r~~~~~~~a~~la~~L~ 277 (389)
T PRK05968 260 LRMKAHEASALEIARRLK 277 (389)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344454444444444443
No 213
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.60 E-value=2.1e-14 Score=133.24 Aligned_cols=165 Identities=19% Similarity=0.126 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH-HHHhhcCCeEEEEec
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV-RFCTDSRLNVGAYRY 287 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~~~~v~~ 287 (583)
.++++.++++++ ..++++++ ++|+++|+.++ +..+.+++++|++++|+|.... ..++..|++++.++.
T Consensus 3 ~~~~~~l~~~~~------~~~~~~~~--~~~~t~a~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~ 71 (170)
T cd01494 3 EELEEKLARLLQ------PGNDKAVF--VPSGTGANEAA---LLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPV 71 (170)
T ss_pred HHHHHHHHHHcC------CCCCcEEE--eCCcHHHHHHH---HHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEecc
Confidence 578899999884 45678999 89999999985 4445566899999999999888 888999999999988
Q ss_pred ccCCC-CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH
Q psy14428 288 FDNKT-NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS 366 (583)
Q Consensus 288 ~d~~~-~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~ 366 (583)
+... ...+.+.+++.. ..++++++++++++||+|...+. ++|.++|+++++++|+|++|..+..... .
T Consensus 72 -~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~--~--- 140 (170)
T cd01494 72 -DDAGYGGLDVAILEELK--AKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAP--G--- 140 (170)
T ss_pred -CCCCccchhhhhhhhcc--ccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEeccccccccccc--c---
Confidence 4322 111222333322 25678999999999999999876 6778888999999999999998887531 1
Q ss_pred HHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 367 LRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 367 ~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
.. ....+..+++.|++|.++. .|+|++++
T Consensus 141 -~~-~~~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 141 -VL-IPEGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred -cc-cccccCCEEEEEcccccCC--CceEEEEe
Confidence 01 1123456888999999973 89999986
No 214
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.60 E-value=9.2e-14 Score=145.68 Aligned_cols=190 Identities=16% Similarity=0.096 Sum_probs=131.3
Q ss_pred CChHHHHHHHHHhccCC--CCCCCCCCC------CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNL--DHEYANIGG------DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~--~~~Y~~~~G------~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~ 253 (583)
+++.+.+++.+...... ........+ ..++|+.++++++ +++++|++ |+|+++++.++...+..
T Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~--~~g~t~a~~~~l~~l~~ 81 (353)
T TIGR03235 10 IDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG------ADTEEVIF--TSGATESNNLAILGLAR 81 (353)
T ss_pred CCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEE--eCCHHHHHHHHHHHHHH
Confidence 56788888877663310 111111112 4678888888875 45789999 99999999886433321
Q ss_pred h-CCCC-CEEEEcCCCChhh---HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 254 F-YPGV-KTVYFPTPTWNGH---VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 254 ~-~~~g-d~Vlv~~P~y~~~---~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
. ..+| +.|++....++.+ ...++..|++++.+++ ++ ++.+|++.+++.+ .++++++++++++||||.+++
T Consensus 82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~-~~~~d~~~l~~~l---~~~~~lv~~~~~~n~tG~~~~ 156 (353)
T TIGR03235 82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPV-DE-SGRIDVDELADAI---RPDTLLVSIMHVNNETGSIQP 156 (353)
T ss_pred hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEcc-CC-CCcCCHHHHHHhC---CCCCEEEEEEcccCCceeccC
Confidence 1 1245 7788876555543 4445667999999998 43 4678999998877 457899999999999999998
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+++|.++|+++++++|+|+++.--...- .+ +..+--+++.|..|.+|.+| +|++++
T Consensus 157 ---~~~I~~l~~~~~~~~ivD~a~~~g~~~~------~~----~~~~~D~~~~s~~K~~gp~g--~g~l~~ 212 (353)
T TIGR03235 157 ---IREIAEVLEAHEAFFHVDAAQVVGKITV------DL----SADRIDLISCSGHKIYGPKG--IGALVI 212 (353)
T ss_pred ---HHHHHHHHHHcCCEEEEEchhhcCCccc------cc----cccCCCEEEeehhhcCCCCc--eEEEEE
Confidence 5777888999999999999965322110 11 11233466778899887566 799998
No 215
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.59 E-value=6.5e-13 Score=143.56 Aligned_cols=271 Identities=12% Similarity=0.070 Sum_probs=163.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++..... ....-..+.+..+|+.+....... ..+++.. +++|
T Consensus 52 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f--~~sG 124 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHS--HPKVKEALHKQVDQYIHT--GFNVMMYEPYIELAEKLAALAPGS-FDKKVLF--LNSG 124 (451)
T ss_pred CCCEEEEcCCchhhcCCCCC--CHHHHHHHHHHHHhccCc--cccccccHHHHHHHHHHHHhCCCC-CCCEEEE--cCCc
Confidence 34566888877776666643 467777777766542111 111112244455555554322110 1158999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-CC-------------eEEEEecccCC--CCCCC--------
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-RL-------------NVGAYRYFDNK--TNGLD-------- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~-------------~~~~v~~~d~~--~~g~d-------- 296 (583)
++|.+.+..+.+.... ...|+...-+|.+........ |. .+..+|..+.. ..++.
T Consensus 125 seA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (451)
T PRK06918 125 AEAVENAVKIARKYTK-RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFM 203 (451)
T ss_pred HHHHHHHHHHHHHHhC-CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHH
Confidence 9999988766665543 467888888887664332221 10 12223321100 01111
Q ss_pred hhhHHHHHHc-CCCCcEEEEeCCCCCCC-CCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh
Q psy14428 297 FAGMMEDIKA-MPERSILFLQTSSHNPT-GVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE 373 (583)
Q Consensus 297 ~~~l~~~l~~-~~~~~~~i~i~~p~NPT-G~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~ 373 (583)
.+.+++.++. ......+.++..|-+.. |.++ +.+.+++|.++|++||+++|+||+|.+|.+.+ ...++..+ +.
T Consensus 204 ~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g---~~~a~~~~-~v 279 (451)
T PRK06918 204 IEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG---KYFAIEHF-DV 279 (451)
T ss_pred HHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC---ceehhHhc-CC
Confidence 1123332321 12344555566777777 4434 55669999999999999999999999997765 22333333 21
Q ss_pred cCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHH---hCChhhhhhhhhHH
Q psy14428 374 VGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEI---LSDPKLKAQCDETE 450 (583)
Q Consensus 374 ~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~---l~~~~~~~~~~~~~ 450 (583)
... +.||||.++ +|+|+||+++ + +++++.+........++.++++|.++... ++++.+.++.+...
T Consensus 280 ~pD---i~t~sK~l~-~G~pig~v~~--~-----~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g 348 (451)
T PRK06918 280 VPD---LITVSKSLG-AGVPISGVIG--R-----KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELG 348 (451)
T ss_pred CCC---EEeeehhhc-CCCccEEEEE--c-----HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 122 558999999 9999999999 7 57888876555556778899999995554 44666666666555
Q ss_pred HHHH
Q psy14428 451 RIMS 454 (583)
Q Consensus 451 ~~~~ 454 (583)
..+.
T Consensus 349 ~~l~ 352 (451)
T PRK06918 349 KVVM 352 (451)
T ss_pred HHHH
Confidence 4433
No 216
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.59 E-value=7.1e-13 Score=141.44 Aligned_cols=254 Identities=12% Similarity=0.052 Sum_probs=155.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...+|+..|.+....|. ..|.+.+++.+.++.. .+.. ... ..+..+.+.+.+....+ .+.+++ +++|+
T Consensus 30 g~~~lD~~~~~~~~~~Gh--~~p~v~~a~~~~~~~~-~~~~-~~~-~~~~~~~~~~~l~~~~~----~~~~~~--~~SGs 98 (400)
T PTZ00125 30 GKKYYDFLSAYSAVNQGH--CHPKILAALINQAQKL-TLTS-RAF-YNDVLGLAEKYITDLFG----YDKVLP--MNSGA 98 (400)
T ss_pred CCEEEEcccCHhhccCCc--CCHHHHHHHHHHHHhc-cccc-ccc-cCHHHHHHHHHHHhCCC----CCEEEE--eCCcH
Confidence 456788877766544443 2467777777665431 1111 100 11233334444433222 257888 88889
Q ss_pred hHHHHHHHHHHHh------C-CCCCEEEEcCCCChhhHHHH-hhcCCe------------EEEEecccCCCCCCChhhHH
Q psy14428 242 GSLRVGTAFLERF------Y-PGVKTVYFPTPTWNGHVRFC-TDSRLN------------VGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 242 ~al~l~~~~l~~~------~-~~gd~Vlv~~P~y~~~~~~~-~~~G~~------------~~~v~~~d~~~~g~d~~~l~ 301 (583)
+|.+.+..+.+.. . ..++.|++.+-+|....... ...+.. +..++. .|++.++
T Consensus 99 ~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le 171 (400)
T PTZ00125 99 EAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY-------NDVEALE 171 (400)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC-------CCHHHHH
Confidence 9988865444321 1 12467888887776654332 222211 111111 2788888
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 302 EDIKAMPERSILFLQTSSHNPTGVDLS-EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 302 ~~l~~~~~~~~~i~i~~p~NPTG~~~s-~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
+.++ .++++++++.+++||||.+++ .+.+++|.++|++||+++|+||+|.++...+ ..... ........+
T Consensus 172 ~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G---~~~~~-~~~~~~pd~--- 242 (400)
T PTZ00125 172 KLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG---KLLAH-DHEGVKPDI--- 242 (400)
T ss_pred HHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhHH-HhcCCCCCE---
Confidence 8874 356888888889999999996 5569999999999999999999998886654 11111 111111223
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhH
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDET 449 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~ 449 (583)
.+|||.++..++|+||+++ + +++++.+........++.+++.|.++.+.++ ++.+.++..++
T Consensus 243 ~~~sK~l~~g~~~ig~v~~--~-----~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~ 307 (400)
T PTZ00125 243 VLLGKALSGGLYPISAVLA--N-----DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRL 307 (400)
T ss_pred EEEcccccCCCcCcEEEEE--c-----HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3478999844459999999 7 5788887665555566778888888866543 33444444433
No 217
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.58 E-value=1.8e-13 Score=143.89 Aligned_cols=214 Identities=13% Similarity=0.060 Sum_probs=149.8
Q ss_pred CCCCCCCCCH---HHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---
Q psy14428 200 HEYANIGGDA---KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR--- 273 (583)
Q Consensus 200 ~~Y~~~~G~~---~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~--- 273 (583)
+.|+ -.|.| .|++.++.... .++.|++ ++ |++|+..+ +..+.++||.|++++|.|.++..
T Consensus 56 y~Ys-R~gnPt~~~Le~~la~le~-------~~~~v~~--sS-G~aAi~~~---l~all~~GD~Vlv~~~~Y~~~~~l~~ 121 (395)
T PRK05967 56 YTYG-TRGTPTTDALCKAIDALEG-------SAGTILV--PS-GLAAVTVP---FLGFLSPGDHALIVDSVYYPTRHFCD 121 (395)
T ss_pred CccC-CCCChHHHHHHHHHHHHhC-------CCCEEEE--Cc-HHHHHHHH---HHHhcCCCCEEEEccCCcHHHHHHHH
Confidence 4454 34444 46666655432 2345555 54 67898875 34456779999999999999875
Q ss_pred -HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccC
Q psy14428 274 -FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY 352 (583)
Q Consensus 274 -~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y 352 (583)
.++..|+++..++. + +.+.+++++ .++++++++.+|+||++ +..++++|+++|+++|+++|+|++|
T Consensus 122 ~~l~~~Gi~v~~vd~---~----~~e~l~~al---~~~TklV~lesPsNP~l---~v~dl~~I~~la~~~g~~vvVD~t~ 188 (395)
T PRK05967 122 TMLKRLGVEVEYYDP---E----IGAGIAKLM---RPNTKVVHTEAPGSNTF---EMQDIPAIAEAAHRHGAIVMMDNTW 188 (395)
T ss_pred HHHHhcCeEEEEeCC---C----CHHHHHHhc---CcCceEEEEECCCCCCC---cHHHHHHHHHHHHHhCCEEEEECCc
Confidence 45778998888754 1 345666666 56799999999999974 7778999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHH
Q psy14428 353 LGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGAR 431 (583)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~ 431 (583)
....+-. ++ ..+--|++.|.+|.++ -.++..|+++. . +++.+++.........+.++...+
T Consensus 189 a~p~~~~------pl-----~~GaDivv~S~tKy~~Gh~d~~~G~v~~--~-----~~~~~~l~~~~~~~G~~~~p~da~ 250 (395)
T PRK05967 189 ATPLYFR------PL-----DFGVDISIHAATKYPSGHSDILLGTVSA--N-----EKCWPQLLEAHGTLGLCAGPDDTY 250 (395)
T ss_pred cCceecC------hh-----HcCCCEEEEecccccCCCCCeeEEEEEc--C-----HHHHHHHHHHHHHcCCCCCHHHHH
Confidence 7543321 12 2345699999999874 24577786665 3 356677766666667778888888
Q ss_pred HHHHHhCC--hhhhhhhhhHHHHHHHHHH
Q psy14428 432 IVTEILSD--PKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 432 ~~~~~l~~--~~~~~~~~~~~~~~~~l~~ 458 (583)
.+..-++. -.+++|.++...+.+.++.
T Consensus 251 l~~rgl~Tl~lR~~~~~~na~~lA~~L~~ 279 (395)
T PRK05967 251 QILRGLRTMGIRLEHHRKSALEIARWLEG 279 (395)
T ss_pred HHHcCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 77777775 3566666666666555543
No 218
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.58 E-value=8.5e-13 Score=141.06 Aligned_cols=238 Identities=13% Similarity=0.028 Sum_probs=148.1
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCC-----CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLD-----HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~-----~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+.++|+...+- |.. ..+.+.+++.+..+. +.. ..+....-..+|.+.+|+++.. +.-+++
T Consensus 45 ~~~~~~~sn~yl---gl~-~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~-------~~~~~~-- 111 (406)
T PRK13393 45 REVTVWCSNDYL---GMG-QHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK-------EAALLF-- 111 (406)
T ss_pred ccEEEeeccccc---CCC-CCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEe--
Confidence 346677665542 221 346677777766654 110 0111111246778888887742 234555
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC-CCcEEEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-ERSILFL 315 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-~~~~~i~ 315 (583)
++|. .|...+...+.. ..+||.|+.....+......++..|.+++.++.. |++.+++.++... +++++++
T Consensus 112 ~SG~-~An~~ai~~l~~-~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~~~~v~ 182 (406)
T PRK13393 112 TSGY-VSNWAALSTLGS-RLPGCVILSDELNHASMIEGIRHSRAEKRIFRHN-------DPADLERKLSDLDPHRPKLVA 182 (406)
T ss_pred CCcH-HHHHHHHHHhhc-CCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCC-------CHHHHHHHHHhccCCCCEEEE
Confidence 5554 566654222211 1247877777777777777777788877666541 6677777665432 3678899
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-cCcEEEEecCcccccccCccc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l~GlRi 394 (583)
+++++||+|.+.+ +++|.++|+++++++|+||+|..-.++.. .. .+....+. .+..|+++||||.+|++|
T Consensus 183 ~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~--G~-g~~~~~~~~~~~~i~~~tlsKa~g~~G--- 253 (406)
T PRK13393 183 FESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPR--GG-GIAEREGLADRLTIIEGTLAKAFGVMG--- 253 (406)
T ss_pred EcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCC--CC-chhhhcCCCCCCeEEEEeCchhhcccC---
Confidence 9999999999998 66778889999999999999973333321 11 11111111 224688899999999888
Q ss_pred eEEEEEcCCchhHHHHHHHHHHHHhcc--ccCCChHHHHHHHHHhC
Q psy14428 395 GTFSVLTPTSDETERIMSQLKILIRGF--YSNPPIHGARIVTEILS 438 (583)
Q Consensus 395 G~lv~~~p~~~~~~~li~~l~~~~~~~--~~~~s~~~q~~~~~~l~ 438 (583)
||+++ + +++++.+....... ..+.++..+.++...++
T Consensus 254 G~~~~--~-----~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~ 292 (406)
T PRK13393 254 GYITG--S-----AALCDFIRSFASGFIFTTSLPPAVAAGALASVR 292 (406)
T ss_pred ceeeC--C-----HHHHHHHHHhCcCceecCccCHHHHHHHHHHHH
Confidence 99987 6 57888887655432 23455566666666554
No 219
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.58 E-value=1.7e-13 Score=144.60 Aligned_cols=187 Identities=14% Similarity=0.150 Sum_probs=131.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH----HHhhcCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR----FCTDSRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~ 283 (583)
...|++++|++.+.. ..+++ ++| +.|+.++ +. ++.+||+|++++|.|+.... .++..|++++
T Consensus 52 ~~~Le~~la~l~g~~-------~al~~--~SG-~~Al~~~---l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~ 117 (380)
T PRK06176 52 RFALEELIADLEGGV-------KGFAF--ASG-LAGIHAV---FS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCT 117 (380)
T ss_pred HHHHHHHHHHHhCCC-------CEEEE--CCH-HHHHHHH---HH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEE
Confidence 678999999987632 23555 555 5588753 33 44679999999999986643 4455788877
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.++. .|++.+++.+ .++++++++.+|+||||.+.+ +++|.++|++++++||+|++|....+..
T Consensus 118 ~vd~-------~d~e~l~~ai---~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~---- 180 (380)
T PRK06176 118 IIDT-------SDLSQIKKAI---KPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN---- 180 (380)
T ss_pred EcCC-------CCHHHHHHhc---CcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC----
Confidence 7654 1778887776 567899999999999999987 5577888999999999999998654332
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ + .+--+++.|++|.++.+|- -.|++++ .+ +++.+++...+.......++...+.+..-++
T Consensus 181 --p~----~-~gaDivv~S~tK~l~g~~d~~gG~vv~--~~----~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~ 243 (380)
T PRK06176 181 --PL----L-LGADIVVHSGTKYLGGHSDVVAGLVTT--NN----EALAQEIAFFQNAIGGVLGPQDSWLLQRGIK 243 (380)
T ss_pred --cc----c-cCCCEEEecCceeccCCccceeeEEEe--cH----HHHHHHHHHHHHHhcCCCCHHHHHHHHhccC
Confidence 11 1 1335899999999976764 4555665 33 3677777766655555556665555555444
No 220
>PRK07505 hypothetical protein; Provisional
Probab=99.58 E-value=3.7e-13 Score=143.70 Aligned_cols=240 Identities=10% Similarity=0.003 Sum_probs=141.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC------CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA------NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
.+...+|++...+ .|. ...+.+.+++.+.+.......+. ...-..+|++.+++++. . +.++.
T Consensus 44 ~g~~~ld~~s~~~---lgl-~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~----~----~~~~~ 111 (402)
T PRK07505 44 DGHTFVNFVSCSY---LGL-DTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFG----A----SVLTF 111 (402)
T ss_pred CCceEEEeecCCc---cCC-CCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhC----C----CEEEE
Confidence 3556678865332 221 23467777776666431001111 12234567777776653 1 44555
Q ss_pred EecCCchhHHHHHHHHHHH-hCCCCC-EEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCC
Q psy14428 235 VQGISGSGSLRVGTAFLER-FYPGVK-TVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE 309 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~-~~~~gd-~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~ 309 (583)
++|+ +|...+..++.. +..+|+ .|++.+..|..... .....+.+++.+|.. |++.+++.+ .+
T Consensus 112 --~sG~-~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~-------d~~~l~~~~---~~ 178 (402)
T PRK07505 112 --TSCS-AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHN-------DLDALEDIC---KT 178 (402)
T ss_pred --CChH-HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC-------CHHHHHHHH---hc
Confidence 6655 455543222221 223233 36677766544321 122235567777651 788888877 34
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH-hcCcEEEEecCccccc
Q psy14428 310 RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK-EVGQLCLAQSFSKNMG 388 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~ 388 (583)
+++++++++|+||||.+++ +++|.++|+++++++|+||+|....++.. ........+.. ..+++|+++||||.++
T Consensus 179 ~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~-g~~~~~~~~~~~~~d~~i~~~s~sK~~~ 254 (402)
T PRK07505 179 NKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKN-GEGYVRSELDYRLNERTIIAASLGKAFG 254 (402)
T ss_pred CCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCC-CCchHHHHcCCCCCCCeEEEEechhhhh
Confidence 5678889999999999998 56677889999999999999866544421 11112222222 3578999999999999
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhcccc--CCChHHHHHHHHHhC
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYS--NPPIHGARIVTEILS 438 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~--~~s~~~q~~~~~~l~ 438 (583)
++| ||+++ ++ +++++.+........+ +++.++..++...++
T Consensus 255 ~~G---g~~~~--~~----~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 255 ASG---GVIML--GD----AEQIELILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred ccC---eEEEe--CC----HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 776 88876 44 4788888765433322 334456665555443
No 221
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.57 E-value=3.9e-13 Score=143.47 Aligned_cols=190 Identities=14% Similarity=0.127 Sum_probs=134.7
Q ss_pred CChHHHHHHHHHhccCC--CCC------CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNL--DHE------YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~--~~~------Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~ 253 (583)
+++.+.+++.+.+.... ... +.......++|+.++++++ +++++|++ |+|+++++.++...+..
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~--~~g~t~a~~~~l~~l~~ 86 (402)
T TIGR02006 15 VDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIG------ADSREIVF--TSGATESNNLAIKGIAH 86 (402)
T ss_pred CCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEE--eCCHHHHHHHHHHHHHH
Confidence 45777777766553210 010 0111245677888888874 45789999 99999999986433322
Q ss_pred -hCCCCCEEEEcCCCChhhHHHH---hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH
Q psy14428 254 -FYPGVKTVYFPTPTWNGHVRFC---TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 254 -~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
+.++||+|++..++|+.+...+ +..|++++.+++ ++ ++.+|++.+++.+ .++++++++++++||||.+.+
T Consensus 87 ~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~-~~-~~~~d~~~l~~~l---~~~~~lv~v~~~~n~tG~~~~- 160 (402)
T TIGR02006 87 FYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPP-KS-NGLIDLEELKAAI---RDDTILVSIMHVNNEIGVIQD- 160 (402)
T ss_pred hhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEcc-CC-CCcCCHHHHHHhc---CCCCEEEEEECCCcCceeccc-
Confidence 3456999999999998765443 456999999998 43 4568999998877 456889999999999999987
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+++|.++|+++|+++++|+++.--... ..+ ...+--+++.|..|.+|.+| +|++++
T Consensus 161 --~~~I~~l~~~~g~~livD~a~a~g~~~------~~~----~~~~~D~~~~s~~K~~gp~G--~G~l~~ 216 (402)
T TIGR02006 161 --IAAIGEICRERKVFFHVDAAQSVGKIP------INV----NELKVDLMSISGHKIYGPKG--IGALYV 216 (402)
T ss_pred --HHHHHHHHHHcCCEEEEEcchhcCCcc------cCc----cccCCCEEEEehhhhcCCCc--eEEEEE
Confidence 557788899999999999997532211 011 11233467778889887446 899988
No 222
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.56 E-value=2.3e-13 Score=144.09 Aligned_cols=188 Identities=17% Similarity=0.114 Sum_probs=131.8
Q ss_pred CChHHHHHHHHHhccCCCCCCCCC---------CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANI---------GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLE 252 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~---------~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~ 252 (583)
+++.+.+++.+.... ...++.. .-..++|+.++++++ +++++|++ |+|+++++.++...+.
T Consensus 11 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~i~~--t~~~t~a~~~al~~~~ 80 (379)
T TIGR03402 11 VDPEVLEAMLPYFTE--YFGNPSSMHSFGGEVGKAVEEAREQVAKLLG------AEPDEIIF--TSGGTESDNTAIKSAL 80 (379)
T ss_pred CCHHHHHHHHHHHHh--cCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEE--eCcHHHHHHHHHHHHH
Confidence 567788887766543 1122211 114567777777775 35789999 9999999988643322
Q ss_pred HhCCCCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH
Q psy14428 253 RFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 253 ~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
...++||.|++....|+.+.. .++..|++++.+|+ +. ++.+|++.+++.+ .++++++++++++||||.+++.
T Consensus 81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~-~~-~g~~~~~~l~~~i---~~~~~lv~i~~~~n~tG~~~~~ 155 (379)
T TIGR03402 81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPV-DE-EGRLDLEELRAAI---TDDTALVSVMWANNETGTIFPI 155 (379)
T ss_pred HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEcc-CC-CCcCCHHHHHHhc---CCCcEEEEEEcccCCeeecccH
Confidence 223457899999888876644 34456999999998 43 3568999998887 5678999999999999999996
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+ +|.++|+++|+++++|+++..-.. +..+ ...+--+++.|..|.+|.+| +|++++
T Consensus 156 ~---~I~~l~~~~g~~vivD~~~~~g~~------~~~~----~~~~~D~~~~s~~K~~gp~G--~g~l~v 210 (379)
T TIGR03402 156 E---EIGEIAKERGALFHTDAVQAVGKI------PIDL----KEMNIDMLSLSGHKLHGPKG--VGALYI 210 (379)
T ss_pred H---HHHHHHHHcCCEEEEECccccccc------ccCc----ccCCCCEEEEcHHHcCCCCc--eEEEEE
Confidence 5 678889999999999999863111 1111 11123466677779777566 788888
No 223
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.56 E-value=1.5e-12 Score=138.04 Aligned_cols=195 Identities=12% Similarity=0.064 Sum_probs=137.1
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCCEEE
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVKTVY 262 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd~Vl 262 (583)
+.-.+++.+.+..+ .|....+..+||++++++++.+ +.++ ++|+++|+.++ +..+ .++||+|+
T Consensus 10 ~~~~~~v~~~~~~~---~~~~g~~~~~le~~la~~~g~~--------~~v~--~~sgt~al~~~---l~al~~~~Gd~Vi 73 (380)
T TIGR03588 10 QDDIDAVVEVLKSD---FLTQGPTVPAFEEALAEYVGAK--------YAVA--FNSATSALHIA---CLALGVGPGDRVW 73 (380)
T ss_pred HHHHHHHHHHHhcC---CccCChhHHHHHHHHHHHHCCC--------eEEE--EcCHHHHHHHH---HHHcCCCCCCEEE
Confidence 44455555555432 2444556799999999999753 3445 66789999985 4444 56799999
Q ss_pred EcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q psy14428 263 FPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ 341 (583)
Q Consensus 263 v~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~ 341 (583)
+++|+|..+...++..|++++.+++ +++++.+|++.+++.+.+. .++++++++ .||+|...+ +++|.++|++
T Consensus 74 v~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~---~~~i~~l~~~ 146 (380)
T TIGR03588 74 TTPITFVATANCALYCGAKVDFVDI-DPDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD---MQAIAALAKK 146 (380)
T ss_pred eCCcchHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---HHHHHHHHHH
Confidence 9999999999999999999999999 6666789999999988421 146777764 457897654 6777888999
Q ss_pred cCeEEEEeccCCCCC-CCCCCCchHHHHHHHHhcCcEEEEecCc--ccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 342 RHLYPFFDMAYLGLT-SGDFDKDAFSLRYFAKEVGQLCLAQSFS--KNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 342 ~~i~iI~De~Y~~l~-~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
++++||+|+++.... +++. + +... +. --+.+.||+ |.++. | .-|+++. .+ +++.++++..
T Consensus 147 ~~~~lI~D~a~a~g~~~~~~--~---~g~~-~~--~d~~~~S~~~~K~~~~-~-~GG~v~~--~~----~~~~~~~~~~ 209 (380)
T TIGR03588 147 HGLKIIEDASHALGAEYGGK--P---VGNC-RY--ADATVFSFHPVKIITT-A-EGGAVTT--ND----EELAERMRLL 209 (380)
T ss_pred cCCEEEEECCCcccCccCCE--e---CCCc-cc--cceEEEecCCCCcccc-c-CceEEEE--CC----HHHHHHHHHH
Confidence 999999999997643 3331 1 1110 11 135555654 88863 3 5788887 55 4677776654
No 224
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.55 E-value=6.8e-13 Score=140.86 Aligned_cols=200 Identities=15% Similarity=0.157 Sum_probs=140.6
Q ss_pred CCeEEEecCCchh-HHHHHHHHHHHhC---CCCCEEEEcCCCChhhHHHHhhcCCeEEEEec-ccCCCCCCChhhHHHHH
Q psy14428 230 NRLAIVQGISGSG-SLRVGTAFLERFY---PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY-FDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 230 ~~I~i~~t~G~~~-al~l~~~~l~~~~---~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~d~~~~g~d~~~l~~~l 304 (583)
+..++ ++|+++ ++.++ +..+. ++||.|+++.-++......+...|++++.++. .+++++.+|++.+++++
T Consensus 124 ~~a~~--v~~~Tg~al~la---L~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aI 198 (444)
T TIGR03531 124 KSAFV--VPLATGMSLSLC---LSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAI 198 (444)
T ss_pred CEEEE--ECCHHHHHHHHH---HHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHH
Confidence 35667 888884 66664 33333 25899999999999999999999999999994 25667899999999999
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH---hcCc-EEEE
Q psy14428 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK---EVGQ-LCLA 380 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~---~~~~-vi~i 380 (583)
.....+.+++++.+|+ |+...+.+++++|.++|++|++++|+|++|+.... ....+.. ..++ .+++
T Consensus 199 t~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~--------~~~~~~~~g~~~Grad~vv 268 (444)
T TIGR03531 199 EEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN--------KYMELINKAIKVGRVDAVV 268 (444)
T ss_pred HhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh--------hhhhhhhccccccCCCeEE
Confidence 6443366777777776 77777899999999999999999999999985321 1111111 1122 5667
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC--ChhhhhhhhhHHHHH
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS--DPKLKAQCDETERIM 453 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~--~~~~~~~~~~~~~~~ 453 (583)
.|++|++.+||. |+++.. .+ +++++++...... ...+...|.+...++. ...+++.+++..+..
T Consensus 269 ~s~hK~l~~pg~--Gg~I~~-~d----~el~~~i~~~y~g--~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a 334 (444)
T TIGR03531 269 SSTDKNFMVPVG--GAIIYS-FD----ENFIQEISKSYPG--RASASPSLDVLITLLSLGSKGYLELLKERKEMY 334 (444)
T ss_pred EeCccCCCCCCC--EEEEEE-CC----HHHHHHHHHhccC--CCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 899999998888 777642 44 4778877764322 2344567776666654 345555544444333
No 225
>PRK14012 cysteine desulfurase; Provisional
Probab=99.55 E-value=2.3e-13 Score=145.38 Aligned_cols=190 Identities=13% Similarity=0.081 Sum_probs=135.1
Q ss_pred CChHHHHHHHHHhc--cCC--CCC------CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYE--KNL--DHE------YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFL 251 (583)
Q Consensus 182 ~~~~v~~a~~~~~~--~~~--~~~------Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l 251 (583)
+++.+.+++.+... ... ... +.......++|+.++++++ .++++|++ |+|+++++.++...+
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g------~~~~~v~~--~~g~t~al~~~l~~l 86 (404)
T PRK14012 15 VDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIG------ADPREIVF--TSGATESDNLAIKGA 86 (404)
T ss_pred CCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcC------cCcCeEEE--eCCHHHHHHHHHHHH
Confidence 55777887766553 110 010 1111235677888888874 45678999 999999999864333
Q ss_pred HH-hCCCCCEEEEcCCCChhhHHHH---hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCC
Q psy14428 252 ER-FYPGVKTVYFPTPTWNGHVRFC---TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327 (583)
Q Consensus 252 ~~-~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~ 327 (583)
.. ..++||+|++++++|+.....+ +..|++++.+++ |+ ++.+|++.+++.+ .++++++++++++||||.++
T Consensus 87 ~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~-~~-~g~~d~~~l~~~i---~~~t~lv~~~~~~n~tG~~~ 161 (404)
T PRK14012 87 AHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDP-QS-NGIIDLEKLEAAM---RDDTILVSIMHVNNEIGVIQ 161 (404)
T ss_pred HHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEcc-CC-CCcCCHHHHHHhc---CCCCEEEEEECcCCCccchh
Confidence 22 2466999999999998775544 345999999988 54 4668999999888 56788999999999999988
Q ss_pred CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 328 s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+ +++|.++|++++++||+|+++.--... ..+. ..+--+++.|+.|.+| |+ ++|++++
T Consensus 162 ~---~~~I~~la~~~g~~vivD~a~~~g~~~------~~~~----~~~~D~~~~s~~K~~g-p~-g~G~l~~ 218 (404)
T PRK14012 162 D---IAAIGEICRERGIIFHVDAAQSVGKVP------IDLS----KLKVDLMSFSAHKIYG-PK-GIGALYV 218 (404)
T ss_pred h---HHHHHHHHHHcCCEEEEEcchhcCCcc------cCcc----cCCCCEEEEehhhccC-CC-ceEEEEE
Confidence 7 567788899999999999998532111 0111 1123356679999887 65 7999998
No 226
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.55 E-value=2.2e-12 Score=138.31 Aligned_cols=296 Identities=11% Similarity=0.006 Sum_probs=172.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+++.....+. ....+.+..+|+.+..... .-..+++.. +++|
T Consensus 31 dG~~ylD~~~g~~~~~lGh~--~p~v~~a~~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p-~~~~~~v~f--~~sG 103 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHS--HPRVVDAVRTQVAEFTHTCFM--VTPYEGYVALAEKLNRIAP-GSGPKKSVF--FNSG 103 (420)
T ss_pred CCCEEEECccCHHhccCCCC--CHHHHHHHHHHHHhccCcccc--ccCChHHHHHHHHHHHhCC-CCCCCEEEE--eCCc
Confidence 34566888888776656643 367777777766542111111 1111223344444433211 011257888 8999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-C--------C-----eEEEEecccCCCC-----CC----Ch
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-R--------L-----NVGAYRYFDNKTN-----GL----DF 297 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G--------~-----~~~~v~~~d~~~~-----g~----d~ 297 (583)
++|.+.+..+.+.... ..+|+...-+|.+........ | . .+..+|..+.... .. ++
T Consensus 104 seA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
T TIGR00700 104 AEAVENAVKIARSYTG-RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGEL 182 (420)
T ss_pred HHHHHHHHHHHHHhcC-CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHH
Confidence 9999988666655543 467888888886653322221 1 0 1222332110000 00 13
Q ss_pred hhHHHHHH--cCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhc
Q psy14428 298 AGMMEDIK--AMPERSILFLQTSSHNPTGVDLSED-QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEV 374 (583)
Q Consensus 298 ~~l~~~l~--~~~~~~~~i~i~~p~NPTG~~~s~~-~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~ 374 (583)
+.+++.+. ...+...++++-.-+.-+|.+++.+ .+++|.++|++|++++|+||+|.+|.+.+ ...+... .
T Consensus 183 ~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~~a~~~----~ 255 (420)
T TIGR00700 183 AAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AMFACEH----E 255 (420)
T ss_pred HHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hhHHHhh----c
Confidence 44555543 1234555566544455577766544 59999999999999999999999997765 2222222 2
Q ss_pred CcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHH---hCChhhhhhhhhHHH
Q psy14428 375 GQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEI---LSDPKLKAQCDETER 451 (583)
Q Consensus 375 ~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~---l~~~~~~~~~~~~~~ 451 (583)
+.+..+.+|||.++ +|+|+||+++ + +++++.+........++.++++|.++.+. ++++.+.++......
T Consensus 256 ~~~pDi~~lsK~l~-~G~pig~v~~--~-----~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~ 327 (420)
T TIGR00700 256 GPEPDLITTAKSLA-DGLPLSGVTG--R-----AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGR 327 (420)
T ss_pred CCCCCEEEeecccc-CCcceEEEEe--c-----HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 33444567999999 9999999999 7 57888886555556678889999888544 455555555555443
Q ss_pred HH-HHHHHHHhh--ccCCCccchhhHHHHhc
Q psy14428 452 IM-SQLKILIRG--FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 452 ~~-~~l~~~~r~--~~~~~p~~g~~i~~~~l 479 (583)
.+ +.++.+... .+......|.++++.+.
T Consensus 328 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~ 358 (420)
T TIGR00700 328 LVTDRLTTLKAVDPRIGDVRGLGAMIAVELV 358 (420)
T ss_pred HHHHHHHHHHhhCCCEEEeeccceEEEEEEe
Confidence 33 333333221 12223334777777664
No 227
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.54 E-value=4e-13 Score=142.02 Aligned_cols=189 Identities=15% Similarity=0.113 Sum_probs=137.5
Q ss_pred CChHHHHHHHHHhccCC-CC---CCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNL-DH---EYAN----IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~-~~---~Y~~----~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~ 253 (583)
+++.+.+++.+...... .. .|.. ..+..++|+.++++++.. .+++|++ |+|+++++.++ +..
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~al~~~---~~~ 81 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAP-----SSAHVVF--TNNATTALNIA---LKG 81 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcC-----CCCeEEE--eCCHHHHHHHH---HHh
Confidence 45678878776665421 11 2332 256778999999998631 3458999 99999999985 444
Q ss_pred hCCCCCEEEEcCCCChhhHH----HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH
Q psy14428 254 FYPGVKTVYFPTPTWNGHVR----FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 254 ~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
+..+||+|++++++|..+.. +.+..|.+++.++. +. ++.+|++.+++.+ .++++++++++||||||.+++.
T Consensus 82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~---~~~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKC-DN-EGLISPERIKRAI---KTNTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec-CC-CCCcCHHHHHHhc---CCCCeEEEEECCCCCccccCCH
Confidence 66779999999999877643 44556999999988 43 4568999998887 4578899999999999999985
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+ +|.++|+++++++|+|+++..-...- .+ ...+--+++.|+.|.++.|. -+|.+++
T Consensus 157 ~---~i~~l~~~~~~~livD~a~~~g~~~~------~~----~~~~~D~~~~s~~K~l~~p~-g~g~l~~ 212 (376)
T TIGR01977 157 E---EIGELAQENGIFFILDAAQTAGVIPI------DM----TELAIDMLAFTGHKGLLGPQ-GTGGLYI 212 (376)
T ss_pred H---HHHHHHHHcCCEEEEEhhhccCccCC------Cc----hhcCCCEEEecccccccCCC-CceEEEE
Confidence 4 56888999999999999986433210 11 11234578889999886443 3677777
No 228
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.54 E-value=9.6e-13 Score=138.95 Aligned_cols=182 Identities=13% Similarity=0.101 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh---CCCCCEEEEcCCCChhhHHHHhhcCCeEEEE
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF---YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAY 285 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~---~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 285 (583)
.++|+.+|++++ ++++++++ ++|+++++.++...+..+ ..+||+|++++|+|..+...++..|++++.+
T Consensus 62 ~~~~~~la~~~g------~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v 133 (373)
T TIGR03812 62 EEVVGSLGNLLH------LPDAYGYI--VSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHhC------CCCCCeEE--eccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEE
Confidence 456666666664 34578888 999999987753333222 1357999999999999999999999999999
Q ss_pred ecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC--CCc
Q psy14428 286 RYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF--DKD 363 (583)
Q Consensus 286 ~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~--~~~ 363 (583)
+. ++ ++.+|++.+++.+. +++..++..+|+||||.+.+ +++|.++|+++++++|+|++|..+...-. ...
T Consensus 134 ~~-~~-~~~~d~~~l~~~l~---~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~ 205 (373)
T TIGR03812 134 PL-DE-DYTVDVKDVEDLID---DNTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYN 205 (373)
T ss_pred ee-CC-CCCcCHHHHHHHHh---hCcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCC
Confidence 98 43 46789999998884 34443444458999999876 55667788899999999999975532100 000
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
...+ .+ ...+--.+..|..| +++++.|+|+++. .+ +++++.+.
T Consensus 206 ~~~~-d~-~~~~~d~~~~s~~K-~~~~~~~~G~~~~--~~----~~~~~~l~ 248 (373)
T TIGR03812 206 PPPF-DF-SLPGVQSITIDPHK-MGLSPIPAGGILF--RS----KSYLKYLS 248 (373)
T ss_pred CCCc-cc-cCCCCCEEEECccc-cCCCcCCceEEEE--eC----HHHHhhhc
Confidence 0000 00 00011123345669 7778899997776 23 36776664
No 229
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.54 E-value=1.1e-12 Score=138.41 Aligned_cols=206 Identities=16% Similarity=0.154 Sum_probs=135.6
Q ss_pred CChHHHHHHHHHhccCC-CCCCCCCCCCH----HHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC-
Q psy14428 182 VLPSVKEAERRIYEKNL-DHEYANIGGDA----KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY- 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~----~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~- 255 (583)
+.+.+.+++.+...... ...+ ..|.. ++++.++++++ .+++++++ ++|+++++..+...+....
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g------~~~~~~~~--~~ggt~a~~~a~~~~~~~~~ 101 (371)
T PRK13520 32 PHPIARKAHEMFLETNLGDPGL--FPGTAKLEEEAVEMLGELLH------LPDAYGYI--TSGGTEANIQAVRAARNLAK 101 (371)
T ss_pred chHHHHHHHHHHHhcCCCCccc--CccHHHHHHHHHHHHHHHhC------CCCCCeEE--ecCcHHHHHHHHHHHHhhcc
Confidence 44666677666554311 1111 12333 45666666553 33567888 9999999887533332221
Q ss_pred CCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q psy14428 256 PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQL 335 (583)
Q Consensus 256 ~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l 335 (583)
.++|+|++.++.+..+...++..|++++.+|. ++ ++.+|++.+++.+. +++++++++.++||||.+.+ +++|
T Consensus 102 ~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~---~~~~~vi~~~~~~~tG~~~~---l~~I 173 (371)
T PRK13520 102 AEKPNIVVPESAHFSFDKAADMLGVELRRAPL-DD-DYRVDVKAVEDLID---DNTIGIVGIAGTTELGQVDP---IPEL 173 (371)
T ss_pred CCCceEEecCcchHHHHHHHHHcCceEEEecC-CC-CCcCCHHHHHHHHh---hCCEEEEEEcCCcCCcccCC---HHHH
Confidence 24789999999999999888999999999998 43 35789999999883 45666677788999999987 6677
Q ss_pred HHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 336 AVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 336 ~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
.++|+++|+++++|++|..+..+-. .....+ .+ ...+-..+..|..| ++++|.++|++++ .+ +++++.+.
T Consensus 174 ~~l~~~~g~~livD~a~~~~~~~~~-~~~~~~-~~-~~~~vd~~~~s~~K-~~~a~~~~G~~~~--~~----~~~~~~l~ 243 (371)
T PRK13520 174 SKIALENGIFLHVDAAFGGFVIPFL-DDPPNF-DF-SLPGVDSITIDPHK-MGLAPIPAGGILF--RD----ESYLDALA 243 (371)
T ss_pred HHHHHHcCCCEEEEecchhHHHHhh-cCCCCc-cc-cCCCCceEEECCcc-ccCccCCceEEEE--cC----HHHHHhhc
Confidence 8889999999999999986642110 000000 00 01111223345667 6678899999997 43 35666654
No 230
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=2.7e-12 Score=138.04 Aligned_cols=254 Identities=16% Similarity=0.150 Sum_probs=159.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+... ..+.......+.+..+|+.+..... ..-+++.+ +++|
T Consensus 39 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~--~~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f--~~sG 110 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHN--NPRVVKAIKEQTDKL--IHYTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSF--GLSG 110 (443)
T ss_pred CCCEEEEccccHhhcccCCC--CHHHHHHHHHHHHhc--cCccccccCcHHHHHHHHHHHHhCC--CCCCEEEE--cCCH
Confidence 35567888888776666653 467777777766541 1122222223445556666654321 11258999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH-HHHhhcCC------------eEEEEecccCCC--CC--------CCh
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV-RFCTDSRL------------NVGAYRYFDNKT--NG--------LDF 297 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~------------~~~~v~~~d~~~--~g--------~d~ 297 (583)
++|.+.+..+.+.... ...|+.-.-+|.+.. ......|. .+..+|..+... ++ -++
T Consensus 111 sEAve~AlklAr~~tg-r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08360 111 SDANDGAIKFARAYTK-RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189 (443)
T ss_pred HHHHHHHHHHHHHhcC-CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence 9999988766655543 467777776665542 11111111 123333311100 00 123
Q ss_pred hhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhc
Q psy14428 298 AGMMEDIKAM--PERSILFLQTSSHNPTGVDLS-EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEV 374 (583)
Q Consensus 298 ~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~s-~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~ 374 (583)
+.+++.+++. .++..++++..-+||+|.+++ .+.+++|.++|++||+++|+||+|.+|...+ ...+...+ +..
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G---~~~a~~~~-~~~ 265 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG---KWFAIEHF-GVE 265 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---cchhhhhc-CCC
Confidence 3455556432 245667766656799999887 5579999999999999999999999987654 22222222 223
Q ss_pred CcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 375 GQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 375 ~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+.++ +|||.++ +|+|+||+++ + +++++.+.........+.+++.|.++...++
T Consensus 266 pDii---tlsK~l~-~G~pigav~~--~-----~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 318 (443)
T PRK08360 266 PDII---TLGKPLG-GGLPISATIG--R-----AEIMDSLPPLAHAFTLSGNPVASAAALAVIE 318 (443)
T ss_pred CCEE---Eeccccc-CCceeEEEEE--c-----HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHH
Confidence 3444 6799999 9999999999 6 5788888655444566678888888877765
No 231
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.51 E-value=7e-13 Score=144.20 Aligned_cols=206 Identities=14% Similarity=0.114 Sum_probs=146.2
Q ss_pred cCCccccCCCCCCCCChHHHHHHHHHhccCCCCCC---CCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHH
Q psy14428 168 LGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEY---ANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSL 244 (583)
Q Consensus 168 l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y---~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al 244 (583)
++.|.++.. .++.+.+++.+.......+.| +..+|..+++.++.+++.+..|.+ ...+.. ++|+.+.+
T Consensus 73 ~g~G~~~~~-----~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~--~~GA~a~~ 143 (481)
T PRK04366 73 YPLGSCTMK-----YNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQP--AAGAHGEL 143 (481)
T ss_pred ecCcccCCC-----CCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEe--CcHHHHHH
Confidence 666766532 446676666554222224567 467899999999999999888764 334443 77777666
Q ss_pred HHHHHHHHHhCCCCC----EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 245 RVGTAFLERFYPGVK----TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 245 ~l~~~~l~~~~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
..+..+...+.++|| +|++++|.|+.+...++..|++++.+|+ ++ ++.+|++.+++.+ .++++++++++||
T Consensus 144 ~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~-~~-~~~~D~e~L~~~i---~~~t~~V~v~~Pn 218 (481)
T PRK04366 144 TGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS-NE-DGLVDLEALKAAV---GEDTAALMLTNPN 218 (481)
T ss_pred HHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec-CC-CCCcCHHHHHhhc---ccCCeEEEEeCCC
Confidence 543211112344466 9999999999999999999999999998 53 4678999998877 5678888899988
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc----CccceE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY----GERVGT 396 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~----GlRiG~ 396 (583)
|||.. .+++++|+++|+++++++++|.++..-..+- . . +...+--++++|..|.++.| |--+|+
T Consensus 219 -~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~----~-~----~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~ 286 (481)
T PRK04366 219 -TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGK----A-R----PGDMGFDVVHLNLHKTFSTPHGGGGPGSGP 286 (481)
T ss_pred -Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhccc----C-C----ccccCCCEEEEechhhcCCCCCCCCCCeee
Confidence 99954 4579999999999999999999973211110 0 0 11234567888888998755 456788
Q ss_pred EEE
Q psy14428 397 FSV 399 (583)
Q Consensus 397 lv~ 399 (583)
+.+
T Consensus 287 l~~ 289 (481)
T PRK04366 287 VGV 289 (481)
T ss_pred eee
Confidence 887
No 232
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.50 E-value=2.9e-12 Score=136.40 Aligned_cols=249 Identities=9% Similarity=0.014 Sum_probs=161.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.. ..+.+.. ..+....+++.+..... ..+++.+ +++|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~--~~~~~~~-~~~~~~~la~~L~~~~~---~~~~v~f--~~sG 107 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHN--DPDLVAALTEQAGKL--WHTSNVF-YSAPPLKLAEELVTASR---FAEKVFL--CNSG 107 (408)
T ss_pred CCCEEEEcCccHhhccCCCC--CHHHHHHHHHHHHhc--ccccccc-CCHHHHHHHHHHHhhCC---CCCEEEE--cCch
Confidence 45667898888776666643 467777777666531 1111111 12334455666543221 1268999 9999
Q ss_pred hhHHHHHHHHHHHhC--C---C-CCEEEEcCCCChhhHHHHh-hcCCeEEE---EecccC---CCCCCChhhHHHHHHcC
Q psy14428 241 SGSLRVGTAFLERFY--P---G-VKTVYFPTPTWNGHVRFCT-DSRLNVGA---YRYFDN---KTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 241 ~~al~l~~~~l~~~~--~---~-gd~Vlv~~P~y~~~~~~~~-~~G~~~~~---v~~~d~---~~~g~d~~~l~~~l~~~ 307 (583)
++|.+.+..+.+... . + ..+|+...-+|.+...... ..|..... -|+.+. -.+ .|++.+++.++
T Consensus 108 seA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~-- 184 (408)
T PRK04612 108 TEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMA-- 184 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhC--
Confidence 999998766655542 1 1 2468888888876543222 22211100 011000 001 16677777662
Q ss_pred CCCcEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 308 PERSILFLQTSSHNPTGVDLS--EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~~s--~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
......++..|.+++|.+++ ++.+++|.++|+++++++|+||+|..|...+ .. ... ...+.+..+.+|||
T Consensus 185 -~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~--~a~--~~~~~~pdi~t~~K 256 (408)
T PRK04612 185 -GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG---TL--FAH--WQEQVTPDIVTLAK 256 (408)
T ss_pred -CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---ch--hhh--hhcCCCCCEEEEcc
Confidence 34566777889999998877 6789999999999999999999999887654 11 211 12356778999999
Q ss_pred cccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 386 NMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
.++ +|+|+||+++ + +++++.+........++.+++.+.++.+.++
T Consensus 257 ~l~-~G~piga~~~--~-----~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~ 301 (408)
T PRK04612 257 ALG-GGFPIGAMLA--G-----PKVAETMQFGAHGTTFGGNPLAAAVARVALR 301 (408)
T ss_pred hhc-CCCceEEEEE--C-----HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence 999 9999999998 6 4677777654444556788999998888775
No 233
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.50 E-value=6.3e-12 Score=134.89 Aligned_cols=172 Identities=13% Similarity=0.044 Sum_probs=124.5
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHH------HhCCCCCEEEEcCCCChhhHHHHhhcCCe
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLE------RFYPGVKTVYFPTPTWNGHVRFCTDSRLN 281 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~------~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 281 (583)
..+|++++|++++. +++++ ++++++|+.++...+. ....+||+|++++|+|..+...+...|++
T Consensus 65 ~~~fe~~lA~~~g~--------~~~v~--~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~ 134 (438)
T PRK15407 65 NDAFEKKLAEFLGV--------RYALL--VNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLV 134 (438)
T ss_pred HHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCE
Confidence 48899999999864 35777 8889999988633221 02366999999999999999999999999
Q ss_pred EEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCC-CCCC
Q psy14428 282 VGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLT-SGDF 360 (583)
Q Consensus 282 ~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~-~~~~ 360 (583)
++.+++ +.+++++|++.+++.+ .+++++++++++ +|.. ..+++|.++|++++++||+|+++..-. +++
T Consensus 135 pv~vdv-d~~~~~id~~~le~~i---~~~tkaVi~~~~---~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g- 203 (438)
T PRK15407 135 PVFVDV-ELPTYNIDASLLEAAV---SPKTKAIMIAHT---LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDG- 203 (438)
T ss_pred EEEEec-CCCcCCcCHHHHHHHc---CcCCeEEEEeCC---CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCC-
Confidence 999998 6666889999998887 567788777653 4432 367888999999999999999996543 222
Q ss_pred CCchHHHHHHHHhcCcEEEEecC--cccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSF--SKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~--SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
. .+.+ .+ .+.+.|| +|.+. .|- -|+++. .+ +++.++++..
T Consensus 204 -~---~~G~----~g-d~~~fSf~~~k~~~-~ge-GG~l~t--~d----~~l~~~~~~~ 245 (438)
T PRK15407 204 -R---MTGT----FG-DIATLSFYPAHHIT-MGE-GGAVFT--ND----PLLKKIIESF 245 (438)
T ss_pred -e---eeec----cC-ceEEEeCCCCCCcc-ccC-ceEEEE--CC----HHHHHHHHHH
Confidence 1 1111 12 2445666 46664 344 589998 65 3565555544
No 234
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.50 E-value=2.4e-12 Score=137.79 Aligned_cols=155 Identities=18% Similarity=0.129 Sum_probs=118.4
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH----HHHhhcCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV----RFCTDSRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~ 283 (583)
...|.+.+|++.+.. ..++ +++|++|+.++ +..+..+||+|+++.++|.... ..++..|++++
T Consensus 65 ~~~le~~lA~l~g~~--------~al~--~~SG~~Ai~~a---l~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~ 131 (427)
T PRK05994 65 NAVLEERVAALEGGT--------AALA--VASGHAAQFLV---FHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVR 131 (427)
T ss_pred HHHHHHHHHHHhCCC--------cEEE--EcCHHHHHHHH---HHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEE
Confidence 477889999888542 3455 78888898875 4445667999999999998644 34667899998
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.++. + |++.+++.+ .++++++++++|+||||.+++ +++|.++|+++++++|+|+++..-....
T Consensus 132 ~vd~-~------d~~~l~~ai---~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~---- 194 (427)
T PRK05994 132 WADA-D------DPASFERAI---TPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYLIR---- 194 (427)
T ss_pred EECC-C------CHHHHHHhc---CcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccccCC----
Confidence 8765 1 677887777 567899999999999999997 5677888999999999999986322111
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
++ + .+--+++.|++|.+|-+|-.+|.+++
T Consensus 195 --pl----~-~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 --PI----E-HGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred --cc----c-cCCcEEEEcCccccCCCCCcEEEEEE
Confidence 11 1 23448899999999878888887776
No 235
>PLN02624 ornithine-delta-aminotransferase
Probab=99.49 E-value=8.1e-12 Score=135.57 Aligned_cols=245 Identities=12% Similarity=0.070 Sum_probs=157.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|......|. ..|.+.+++.+.++.. ....+.......+|.+.++++. + .+++++ +++
T Consensus 73 dG~~ylD~~sg~~~~~~Gh--~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~----~----~~~~~f--~~S 140 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGH--CHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF----G----YDMVLP--MNT 140 (474)
T ss_pred CCCEEEEcccchhcccCCC--CCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc----C----CCeEEE--eCC
Confidence 4556788888776655554 2467777777666541 1111122333455666666653 2 257888 888
Q ss_pred chhHHHHHHHHHHHhC------CCCC-EEEEcCCCChhhHHHHhhc-CC------------eEEEEecccCCCCCCChhh
Q psy14428 240 GSGSLRVGTAFLERFY------PGVK-TVYFPTPTWNGHVRFCTDS-RL------------NVGAYRYFDNKTNGLDFAG 299 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~------~~gd-~Vlv~~P~y~~~~~~~~~~-G~------------~~~~v~~~d~~~~g~d~~~ 299 (583)
|++|.+.+..+.+... ++++ .|+...-+|.......... +- .+..+|. + |++.
T Consensus 141 GseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~------~-d~~~ 213 (474)
T PLN02624 141 GAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF------G-DLDA 213 (474)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC------C-CHHH
Confidence 9999998755544321 1133 5666666666542221111 10 1122222 1 6788
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 300 MMEDIKAMPERSILFLQTSSHNPTGVDLSEDQ-WRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 300 l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~-~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
+++.++....+..++++..++||+|.++++++ +++|.++|++||+++|.||+|.+|...+ ..... ...+....
T Consensus 214 l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG---~~~a~-~~~~i~pD-- 287 (474)
T PLN02624 214 LEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG---KMLAC-DWEEVRPD-- 287 (474)
T ss_pred HHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc---chhhH-HhcCCCCC--
Confidence 88888655567889999999999999988775 9999999999999999999999876554 11111 11111222
Q ss_pred EEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+-+|||.+|..++++|++++ + +++++.+........++.+++.+.++...++
T Consensus 288 -iv~lsK~lggG~~pigav~~--~-----~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe 339 (474)
T PLN02624 288 -VVILGKALGGGVIPVSAVLA--D-----KDVMLCIKPGEHGSTFGGNPLASAVAMAALQ 339 (474)
T ss_pred -EEEecccccCCCCcceeeee--c-----HHHHhHhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 33469999977799999999 6 4677776654444455678888888877764
No 236
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.49 E-value=9.3e-12 Score=132.85 Aligned_cols=245 Identities=10% Similarity=0.083 Sum_probs=153.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..+.+....|. ..|.+.+++.+.++.. .........-..+|.+.+++++ + .+.+++ +++
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~S 102 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGH--CHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLP--MNT 102 (401)
T ss_pred CCCEEEEcccCHhhccCCC--CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEE--eCc
Confidence 3456678877765444432 2467777776665431 1111101222345555555543 2 257888 899
Q ss_pred chhHHHHHHHHHHHh-------CCCCCEEEEcCCCChhh-HHHHhhcC------------CeEEEEecccCCCCCCChhh
Q psy14428 240 GSGSLRVGTAFLERF-------YPGVKTVYFPTPTWNGH-VRFCTDSR------------LNVGAYRYFDNKTNGLDFAG 299 (583)
Q Consensus 240 ~~~al~l~~~~l~~~-------~~~gd~Vlv~~P~y~~~-~~~~~~~G------------~~~~~v~~~d~~~~g~d~~~ 299 (583)
|++|.+.+..+++.. ....+.|+..+-+|... ...+...| ..++.++. + |++.
T Consensus 103 Gs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-d~~~ 175 (401)
T TIGR01885 103 GAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY------N-NLEA 175 (401)
T ss_pred cHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC------C-CHHH
Confidence 999998875554332 12235677777777653 23333222 11233332 1 6788
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 300 MMEDIKAMPERSILFLQTSSHNPTGVDLSE-DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 300 l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~-~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
+++.+++..++..++++...++++|.+.++ +.+++|.++|++|++++|.||+|..+.+.+ ...+. ...+..+.++
T Consensus 176 le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G---~~~~~-~~~~~~~di~ 251 (401)
T TIGR01885 176 LEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG---KLLCV-DHENVKPDIV 251 (401)
T ss_pred HHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHH-hhcCCCCCEE
Confidence 888886545567788888899999998864 469999999999999999999998876554 12122 1112223344
Q ss_pred EEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+|||.++..|+|+|++++ + +++++.+........++.+++.|.++.+.++
T Consensus 252 ---~~gK~l~~g~~~ig~v~~--~-----~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~ 301 (401)
T TIGR01885 252 ---LLGKALSGGVYPVSAVLA--D-----DDVMLTIKPGEHGSTYGGNPLACAVAVAALE 301 (401)
T ss_pred ---EeeccccCCCCCcEEEEE--c-----HHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 468999866699999999 6 5788877653333345667888888777765
No 237
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=2.6e-12 Score=137.94 Aligned_cols=243 Identities=15% Similarity=0.045 Sum_probs=162.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|. ..+.+.+++.+.+.+. ...|.+..+..+|.+.+++... ..+++++ +++|
T Consensus 48 dG~~~lD~~~g~~~~~lGh--~~p~i~~a~~~~~~~~-~~~~~~~~~~~~la~~L~~~~~-------~~~~v~~--~~sG 115 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGH--AHPEVVEAVIEAAEKG-LSFGAPTELEVELAELVIELVP-------SIEMVRM--VNSG 115 (426)
T ss_pred CCCEEEEcccchhhhhcCC--CCHHHHHHHHHHHHhC-CcCCCCCHHHHHHHHHHHHhCC-------CCCEEEE--ecCH
Confidence 4567889988877655564 3477878777777653 3345566666777777776641 2468999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-C------------CeEE-----EEecccCCCCCCChhhHHH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-R------------LNVG-----AYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G------------~~~~-----~v~~~d~~~~g~d~~~l~~ 302 (583)
++|.+.+..+...... ++.|+..+++|.++...+... | ...+ .+.+ +. -|++.+++
T Consensus 116 seA~e~Aik~a~~~~g-~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~d~~~l~~ 189 (426)
T PRK00062 116 TEATMSAIRLARGYTG-RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA--PY---NDLEAVEE 189 (426)
T ss_pred HHHHHHHHHHHHHHhC-CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc--CC---CCHHHHHH
Confidence 9999987665554433 689999999999975332221 1 1000 0111 10 16788888
Q ss_pred HHHcCCCCcEEEEeC-CCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 303 DIKAMPERSILFLQT-SSHNPTGVDLS-EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~-~p~NPTG~~~s-~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
.+++...+..++++. -+.| +|.+.+ .+.+++|.++|++|++++|.||+|..+..+. ......+ +..+. +
T Consensus 190 ~i~~~~~~~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~~~~-~~~pD---i 260 (426)
T PRK00062 190 LFEEYGDEIAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQGYY-GVTPD---L 260 (426)
T ss_pred HHHhCCCcEEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHHHHh-CCCcc---h
Confidence 776544455555554 6666 787775 8889999999999999999999999885542 1111111 11112 4
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH---HhccccCCChHHHHHHHHHhC
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL---IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~---~~~~~~~~s~~~q~~~~~~l~ 438 (583)
.+|||.++ .|+++|++++ + +++++.+... .....++.+++.+.++...++
T Consensus 261 ~~~gK~l~-~G~p~ga~~~--~-----~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 313 (426)
T PRK00062 261 TTLGKIIG-GGLPVGAFGG--R-----REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLK 313 (426)
T ss_pred HhhhhHhh-CCCcceeeeE--H-----HHHHHhhccCCCceecccCcCCHHHHHHHHHHHH
Confidence 68999999 9999999988 6 5788888532 222345678888888777664
No 238
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.47 E-value=7e-12 Score=133.49 Aligned_cols=241 Identities=13% Similarity=0.142 Sum_probs=150.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+++. ..... ....+....+++.+.+..+ .+++++ +++|
T Consensus 33 dG~~ylD~~~g~~~~~lGh~--~p~v~~a~~~~~~~~--~~~~~-~~~~~~~~~la~~L~~~~~----~~~~~f--~~SG 101 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHA--HPELVKALIEQADKL--WHIGN-GYTNEPVLRLAKKLVDATF----ADKVFF--CNSG 101 (397)
T ss_pred CCCEEEECCcCHhhccCCCC--CHHHHHHHHHHHHhc--ccccC-ccCCHHHHHHHHHHHhhCC----CCEEEE--eCCc
Confidence 35567888887766666653 477777777666541 11111 1112333444444443221 368899 9999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHH-HHhhcCC------------eEEEEecccCCCCCCChhhHHH
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVR-FCTDSRL------------NVGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~d~~~~g~d~~~l~~ 302 (583)
++|.+.+..+.+... ...+.|+..+-+|..... .+...+. .+..+|. .|++.+++
T Consensus 102 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 174 (397)
T TIGR03246 102 AEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKA 174 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHH
Confidence 999998766554442 224567777777766532 2222221 1222222 16788887
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 303 DIKAMPERSILFLQTSSHNPTGVDL--SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~p~NPTG~~~--s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
.+ .+++.++++. |.|++|.+. +.+.+++|.++|++||+++|.||+|..+...+ .......+ +-..-+
T Consensus 175 ~l---~~~~aavi~E-pi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G---~~~a~~~~----gv~pDi 243 (397)
T TIGR03246 175 LI---SDKTCAVIVE-PIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHY----GVTPDI 243 (397)
T ss_pred Hh---ccCeEEEEEe-cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc---cchhhhhc----CCCCCE
Confidence 77 3456677666 555555443 89999999999999999999999998885544 11121111 111223
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
-+|||.++ .|+|+||+++ + +++++.+........++.+++++.++...++
T Consensus 244 ~t~~K~lg-gG~pigav~~--~-----~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~ 293 (397)
T TIGR03246 244 LTSAKALG-GGFPIGAMLT--T-----TEIAAHLKVGTHGTTYGGNPLACAVAGKVLD 293 (397)
T ss_pred EEeehhhh-CCcceeEEEE--c-----HHHHHhccCCCcCCCCCCCHHHHHHHHHHHH
Confidence 48999998 8999999999 6 5788887654333455677788887777664
No 239
>PLN02651 cysteine desulfurase
Probab=99.47 E-value=6e-12 Score=132.58 Aligned_cols=190 Identities=14% Similarity=0.073 Sum_probs=130.4
Q ss_pred CChHHHHHHHHHhccCCCCC----C--CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHH-H
Q psy14428 182 VLPSVKEAERRIYEKNLDHE----Y--AN--IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFL-E 252 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~----Y--~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l-~ 252 (583)
+++.+.+++.+......... + .. ..=..++|+.++++++ .++++|++ |+|+++++.++...+ .
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~v~~--t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 11 IDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIG------ADPKEIIF--TSGATESNNLAIKGVMH 82 (364)
T ss_pred CCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEE--eCCHHHHHHHHHHHHHH
Confidence 56778888766653210000 0 00 0114566777777764 35689999 999999988764333 2
Q ss_pred HhCCCCCEEEEcCCCChhhH---HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH
Q psy14428 253 RFYPGVKTVYFPTPTWNGHV---RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 253 ~~~~~gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
.+.++||+|++.+-.|+.+. ..++..|++++.+++ ++ ++.+|++.+++.+ .++++++++++++||||.+.+
T Consensus 83 ~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~-~~-~~~~d~~~l~~~i---~~~t~lv~v~~~~n~tG~~~~- 156 (364)
T PLN02651 83 FYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPV-KS-DGLVDLDELAAAI---RPDTALVSVMAVNNEIGVIQP- 156 (364)
T ss_pred hccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEcc-CC-CCcCCHHHHHHhc---CCCcEEEEEECCCCCceeccc-
Confidence 23466999999886665543 334457999999988 43 3568999999888 567899999999999999987
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+++|.++|+++|+++++|.++.--... ..+ +..+--+++.|..|.+| | .-+|++++
T Consensus 157 --l~~I~~~~~~~g~~~~vD~a~~~g~~~------~~~----~~~~~D~~~~s~hK~~g-p-~G~g~l~v 212 (364)
T PLN02651 157 --VEEIGELCREKKVLFHTDAAQAVGKIP------VDV----DDLGVDLMSISGHKIYG-P-KGVGALYV 212 (364)
T ss_pred --HHHHHHHHHHcCCEEEEEcchhhCCcc------cCc----ccCCCCEEEechhhhCC-C-CceEEEEE
Confidence 557788899999999999998632211 011 22234577888889543 2 44799998
No 240
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.47 E-value=9.9e-12 Score=130.09 Aligned_cols=176 Identities=16% Similarity=0.050 Sum_probs=128.8
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCCEEEEcCCCChhhHHHHhhcCC
Q psy14428 202 YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVKTVYFPTPTWNGHVRFCTDSRL 280 (583)
Q Consensus 202 Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~ 280 (583)
|.......+|+++++++++. +++++ ++++++|+.++ +..+ ..+||+|+++.|+|..+...+...|+
T Consensus 14 ~~~~~~~~~~~~~la~~~~~--------~~~~~--~~sgt~al~~~---l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~ 80 (352)
T cd00616 14 LTLGPKVREFEKAFAEYLGV--------KYAVA--VSSGTAALHLA---LRALGIGPGDEVIVPSFTFVATANAILLLGA 80 (352)
T ss_pred ccCCHHHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH---HHHcCCCCCCEEEeCCcchHHHHHHHHHcCC
Confidence 33345678999999999862 45777 78889999885 3344 46799999999999999999999999
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
+++.+++ +++++.+|++.+++.+ .+++++++++ ||+|...+ +++|.++|++++++||+|+++.......
T Consensus 81 ~~~~~~~-~~~~~~~d~~~l~~~i---~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~- 149 (352)
T cd00616 81 TPVFVDI-DPDTYNIDPELIEAAI---TPRTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYK- 149 (352)
T ss_pred eEEEEec-CCCcCCcCHHHHHHhc---CcCCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeEC-
Confidence 9999998 5545788999998877 4567877765 57998776 5666788999999999999987432211
Q ss_pred CCchHHHHHHHHhcCcEEEEecCc--ccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFS--KNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~S--K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
.. .+ +.. ..+.+.||+ |.+ ++-+.|+++. ++ ++++++++..
T Consensus 150 --~~-~~----~~~-~d~~~~S~~~~K~~--~~~~gg~~~~--~~----~~~~~~~~~~ 192 (352)
T cd00616 150 --GR-KV----GTF-GDAGAFSFHPTKNL--TTGEGGAVVT--ND----EELAERARLL 192 (352)
T ss_pred --CE-Ec----ccC-cceeEEcCCCCCCC--cccCceEEEE--CC----HHHHHHHHHH
Confidence 00 11 111 135667766 877 4556788888 64 3677776654
No 241
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.44 E-value=9.8e-12 Score=133.06 Aligned_cols=295 Identities=11% Similarity=0.045 Sum_probs=176.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.. . .+.......+.+..+++.+....... ..+++.. +++|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l-~-~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f--~~SG 110 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHR--HPRVIAAVKAQLDRF-T-HTCHQVVPYENYVRLAERLNALVPGD-FAKKTIF--VTTG 110 (425)
T ss_pred CCCEEEEccccHHhhccCCC--CHHHHHHHHHHHhhc-c-CcccCccCCHHHHHHHHHHHHhCCCC-CCCEEEE--CCch
Confidence 45567888888776656643 467777777766541 1 11111111233444555554322100 1258999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cC-------------CeEEEEecccCCCCCCC----hhhHHH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SR-------------LNVGAYRYFDNKTNGLD----FAGMME 302 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G-------------~~~~~v~~~d~~~~g~d----~~~l~~ 302 (583)
++|.+.+..+.+.... ..+|+...-+|.+....... .| ..++.+|+.+ ...+.+ ++.+++
T Consensus 111 seA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~l~~ 188 (425)
T PRK07495 111 AEAVENAVKIARAATG-RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPV-ELHGVSVEQSLAALDK 188 (425)
T ss_pred HHHHHHHHHHHHHhhC-CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCc-ccccccHHHHHHHHHH
Confidence 9999987666555533 46788888777665322111 01 1233444421 112333 333455
Q ss_pred HHHc--C-CCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 303 DIKA--M-PERSILFLQTSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 303 ~l~~--~-~~~~~~i~i~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
.+++ . .+...+|+-|..+| +| ..++++.+++|.++|++||+++|+||+|.+|...+ ..... +..+.+.
T Consensus 189 ~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G---~~~a~----~~~gv~p 260 (425)
T PRK07495 189 LFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTG---KLFAM----EHHEVAA 260 (425)
T ss_pred HHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCC---Cceee----cccCCCC
Confidence 5542 1 22345555677788 78 56899999999999999999999999999886554 11111 2234566
Q ss_pred EEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHH---HHHHHhCChhhhhhhhhHHHHHHH
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGAR---IVTEILSDPKLKAQCDETERIMSQ 455 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~---~~~~~l~~~~~~~~~~~~~~~~~~ 455 (583)
.+.+|||.++ .|+|+|++++ + +++++.+........++.+++++. ++.++++++.+.++.+.....+.+
T Consensus 261 Di~tlsK~l~-~G~pigav~~--~-----~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 332 (425)
T PRK07495 261 DLTTMAKGLA-GGFPLAAVTG--R-----AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQ 332 (425)
T ss_pred CEEeehhhhc-CCccceEEEE--c-----HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 7899999998 9999999999 7 578877765444456678888888 444555566666666555544333
Q ss_pred -HHHHHhhc--cCCCccchhhHHHHhcC
Q psy14428 456 -LKILIRGF--YSNPPIHGARIVTEILS 480 (583)
Q Consensus 456 -l~~~~r~~--~~~~p~~g~~i~~~~l~ 480 (583)
++.+.... +...-..|.++|..+..
T Consensus 333 ~L~~l~~~~~~i~~vrG~Gl~~~iel~~ 360 (425)
T PRK07495 333 RLASLRETVPEIADIRGPGFMNAVEFND 360 (425)
T ss_pred HHHHHHhhCCCeeeeecCceEEEEEEec
Confidence 33332211 11122346777776643
No 242
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=3.9e-11 Score=128.55 Aligned_cols=254 Identities=12% Similarity=0.093 Sum_probs=158.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+++.....+. ....+.+..+|+.+...... -..+++.+ +++|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~-~~~~~~~f--~~sG 110 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHR--HPKVVAAVRQQLDQFTHTAYQ--IVPYASYVTLAERINALAPI-DGPAKTAF--FTTG 110 (421)
T ss_pred CCCEEEEcccCHHhhccCCC--CHHHHHHHHHHHhhccccccc--ccCChHHHHHHHHHHHhCCC-CCCceEEE--eCCc
Confidence 34566888777765555543 366777777766542111111 11122334444554432110 11358888 8899
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cCC-------------eEEEEecccCCCCCC----ChhhHHH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SRL-------------NVGAYRYFDNKTNGL----DFAGMME 302 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~-------------~~~~v~~~d~~~~g~----d~~~l~~ 302 (583)
++|.+.+..+.+.... ..+|+..+-+|.+....... .|. .+..++..+. ..+. +++.+++
T Consensus 111 seA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~ 188 (421)
T PRK06777 111 AEAVENAVKIARAYTG-RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEALSSVER 188 (421)
T ss_pred HHHHHHHHHHHHHhhC-CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHHHHHHHH
Confidence 9999988666655543 46788888887766433322 121 1122222111 1111 2455666
Q ss_pred HHHc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 303 DIKA--MPERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 303 ~l~~--~~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
.+++ ..++..++++-.-++..|. +.+++.+++|.++|+++|+++|.||+|.+|.+.+ ...+...+ +..+.++
T Consensus 189 ~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g---~~~~~~~~-~~~pDiv- 263 (421)
T PRK06777 189 LFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG---KLFAMEYY-DVKPDLI- 263 (421)
T ss_pred HHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC---chhhhhhc-CCCCCEE-
Confidence 6643 2344556666556777885 6899999999999999999999999999987654 22233322 2222333
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+|||.++ +|+|+||+++ + +++++.+........++.++++|.++.+.|+
T Consensus 264 --~~sK~l~-~G~pigav~~--~-----~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 264 --TMAKSLG-GGMPISAVVG--R-----AEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred --eeehhhc-CCCceEEEEE--c-----HHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 7999999 9999999999 6 5788887765555567789999999988885
No 243
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.40 E-value=2.3e-10 Score=121.77 Aligned_cols=223 Identities=14% Similarity=0.086 Sum_probs=139.6
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCCC-CCCCCCCC----HHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLDH-EYANIGGD----AKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~~-~Y~~~~G~----~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+.++|+..++- |.. ..+.++++..+..++ +... +=.-..|. .+|.+++|++++.. +-+++
T Consensus 102 r~~l~FsSndYL---GL~-~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e-------~all~-- 168 (476)
T PLN02955 102 KKLLLFSGNDYL---GLS-SHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKE-------DCLVC-- 168 (476)
T ss_pred ceEEEeeccCcc---CCC-CCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCC-------cEEEE--
Confidence 356888877663 222 345677776666654 1110 00012344 78999999999642 33444
Q ss_pred cCCchhHHHHHHHHHHH-----------hCCCCCEEEEcCCCChhhHHHHhhc----CCeEEEEecccCCCCCCChhhHH
Q psy14428 237 GISGSGSLRVGTAFLER-----------FYPGVKTVYFPTPTWNGHVRFCTDS----RLNVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~-----------~~~~gd~Vlv~~P~y~~~~~~~~~~----G~~~~~v~~~d~~~~g~d~~~l~ 301 (583)
.+|-...+.++. .+.. ...++|.|+...-.......-++.. +++++.++- . |++.++
T Consensus 169 sSGy~AN~~~i~-aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H---N----D~~~Le 240 (476)
T PLN02955 169 PTGFAANMAAMV-AIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH---C----DMYHLN 240 (476)
T ss_pred CChHHHHHHHHH-HHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC---C----CHHHHH
Confidence 555444343322 2210 0233556666555566666666655 466666543 1 889999
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEe
Q psy14428 302 EDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQ 381 (583)
Q Consensus 302 ~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~ 381 (583)
+.+++...+.++|++-.--++.|.+.+ +.+|.++|++|++++|+||++..+.++.. ..-....+.-..+..|+++
T Consensus 241 ~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~--G~G~~e~~g~~~di~ii~~ 315 (476)
T PLN02955 241 SLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGEN--GGGVAEEFNCEADVDLCVG 315 (476)
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCC--CCcHHHHhCCCCCCcEEEE
Confidence 988776555566666666788898888 66667778899999999999998887641 1112222211246789999
Q ss_pred cCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhcc
Q psy14428 382 SFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGF 421 (583)
Q Consensus 382 S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~ 421 (583)
||||.+|..| |++++ + +++++.++...+..
T Consensus 316 TLsKA~G~~G---Gfi~g--s-----~~~~~~l~~~~~~~ 345 (476)
T PLN02955 316 TLSKAAGCHG---GFIAC--S-----KKWKQLIQSRGRSF 345 (476)
T ss_pred eCccchhccC---ceeec--H-----HHHHHHHHHhCCCC
Confidence 9999876555 99998 6 57888888765554
No 244
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.38 E-value=4.8e-11 Score=127.72 Aligned_cols=155 Identities=16% Similarity=0.136 Sum_probs=120.1
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~ 283 (583)
..+|++.+|++.+.. ..++ |++++.|+.++. ..+..+||+|+++...|......+ +..|++++
T Consensus 66 ~~~le~~lA~l~g~~--------~av~--~sSGt~Al~~al---~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~ 132 (433)
T PRK08134 66 VAVLEERVAALEGGV--------GAIA--TASGQAALHLAI---ATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETT 132 (433)
T ss_pred HHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHHH---HHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEE
Confidence 688999999998642 3466 899999999863 233556999999999998765544 45799998
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.++. + |++.+++.+ .++++++++.+|+||||.+.+ +++|.++|+++++++|+|.++.--....
T Consensus 133 ~vd~-~------d~~~l~~~i---~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~~---- 195 (433)
T PRK08134 133 FVKP-G------DIDGWRAAI---RPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLLR---- 195 (433)
T ss_pred EECC-C------CHHHHHHhc---CCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----
Confidence 8876 2 678888877 678899999999999999998 5666888899999999999975322211
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
++ ..+--+++.|.+|.++-+|..+|.+++
T Consensus 196 --pl-----~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 196 --PF-----EHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred --ch-----hcCCCEEEeccccccCCCCCceEEEEE
Confidence 11 124468899999999888888888776
No 245
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.35 E-value=8.4e-11 Score=125.75 Aligned_cols=213 Identities=14% Similarity=0.102 Sum_probs=140.9
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~ 283 (583)
...|++.+|++.+.. ..++ +++|+.|+..+ +..++.+||.|++....|...... +...|++++
T Consensus 71 ~~~Le~~lA~l~g~~--------~av~--~sSG~aAi~~a---l~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~ 137 (436)
T PRK07812 71 QDVVEQRIAALEGGV--------AALL--LASGQAAETFA---ILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVS 137 (436)
T ss_pred HHHHHHHHHHHhCCC--------eEEE--EccHHHHHHHH---HHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEE
Confidence 468888998887642 3455 67778888875 344566799999999888776543 344677777
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.++ +. .|++.+++.+ .++++++++.+|+||+|.+.+. ++|.++|+++|+++|+|+++..-....
T Consensus 138 ~vd--d~----~d~e~l~~ai---~~~tklV~ie~~sNp~G~v~Dl---~~I~~la~~~gi~liVD~t~a~~~~~~---- 201 (436)
T PRK07812 138 FVE--DP----DDLDAWRAAV---RPNTKAFFAETISNPQIDVLDI---PGVAEVAHEAGVPLIVDNTIATPYLIR---- 201 (436)
T ss_pred EEC--CC----CCHHHHHHhC---CCCCeEEEEECCCCCCCeecCH---HHHHHHHHHcCCEEEEECCCcccccCC----
Confidence 663 12 1778887766 5778999999999999999985 556778889999999999875321111
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCch-h-------------------------HHHHH-HHHHH
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSD-E-------------------------TERIM-SQLKI 416 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~-~-------------------------~~~li-~~l~~ 416 (583)
++ + .+--+++.|++|.+|-.|--+|.+++ .+.. . .+.++ +....
T Consensus 202 --pl----~-~GaDivv~S~tK~lgg~G~~i~G~vv--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (436)
T PRK07812 202 --PL----E-HGADIVVHSATKYLGGHGTAIAGVIV--DGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQ 272 (436)
T ss_pred --ch----h-cCCCEEEEecccccCCCCCeEEEEEE--cCCccccccccccccccCCcccccchhhhcchhHHHHHHHHH
Confidence 11 1 23346679999999888877888887 3210 0 00111 11112
Q ss_pred HHhccccCCChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHHH
Q psy14428 417 LIRGFYSNPPIHGARIVTEILSD--PKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 417 ~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~~ 458 (583)
..+......++...+.+..-+++ -.++++.++..++.+.++.
T Consensus 273 ~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~ 316 (436)
T PRK07812 273 LLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEA 316 (436)
T ss_pred HHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHh
Confidence 33445667777777777666664 3456666565555555543
No 246
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.32 E-value=1.7e-10 Score=119.07 Aligned_cols=192 Identities=16% Similarity=0.041 Sum_probs=138.7
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEE
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYF 263 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv 263 (583)
+...+++.+.+..+ .+....-..+|.+++++|++.++ .+. ++.++.|++++...+. ..|||+|++
T Consensus 15 ~~e~~~v~~vl~sg---~i~~G~~v~~FE~~~ae~~G~k~--------ava--~~sgT~AL~laL~al~--ig~GDeVI~ 79 (374)
T COG0399 15 EEELAAVQEVLKSG---WLTGGPFVRRFEQAFAEYLGVKY--------AVA--VSSGTAALHLALLALA--IGPGDEVIV 79 (374)
T ss_pred hHHHHHHHHHHHcC---CeecChHHHHHHHHHHHHhCCCe--------EEE--ecChHHHHHHHHHhcC--CCCCCEEEe
Confidence 45566666666543 12233335899999999998654 444 8889999999633222 466999999
Q ss_pred cCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q psy14428 264 PTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRH 343 (583)
Q Consensus 264 ~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~ 343 (583)
++-+|....+.+...|++++.+++ |++++.+|++.++++| ++++++|+..+- -|..- ++++|.++|++||
T Consensus 80 ps~TfvATan~i~~~Ga~PVFvDi-d~~T~nid~~~ie~aI---t~~tKAIipVhl---~G~~~---dm~~i~~la~~~~ 149 (374)
T COG0399 80 PSFTFVATANAVLLVGAKPVFVDI-DPDTLNIDPDLIEAAI---TPRTKAIIPVHL---AGQPC---DMDAIMALAKRHG 149 (374)
T ss_pred cCCchHHHHHHHHHcCCeEEEEec-CCcccCCCHHHHHHHc---ccCCeEEEEehh---ccCCC---CHHHHHHHHHHcC
Confidence 999999999999999999999999 8888999999999999 677888874322 23333 5777888899999
Q ss_pred eEEEEeccCCCCC-CCCCCCchHHHHHHHHhcCcEEEEecC--cccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 344 LYPFFDMAYLGLT-SGDFDKDAFSLRYFAKEVGQLCLAQSF--SKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 344 i~iI~De~Y~~l~-~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
++||||.+.+.-. |.+. .+-++ -.+.+.|| +|.+. +| --|.++. .| +++.++++...
T Consensus 150 l~vIEDaAqa~Ga~y~gk-----~vGt~-----Gd~~~fSF~~~K~it-tg-EGGav~t--nd----~ela~k~~~lr 209 (374)
T COG0399 150 LPVIEDAAQAHGATYKGK-----KVGSF-----GDIGAFSFHATKNLT-TG-EGGAVVT--ND----EELAEKARSLR 209 (374)
T ss_pred CeEEEEcchhccCeecCc-----ccccc-----cceEEEEecCCCCcc-cc-CceEEEe--CC----HHHHHHHHHHH
Confidence 9999999975432 3321 11111 23555665 78887 66 6788888 55 47777777653
No 247
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.31 E-value=5.2e-10 Score=120.53 Aligned_cols=252 Identities=12% Similarity=0.060 Sum_probs=149.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCC--CCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDH--EYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~--~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|. -.+.+.+++.+.++..... .........+|-+.+++... -..+.+++ ++
T Consensus 41 dG~~ylD~~~g~~~~~lGh--~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~------~~~~~v~f--~~ 110 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGH--RHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITP------GGLDCFFF--SN 110 (433)
T ss_pred CCCEEEECCcchhhccCCC--CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCC------CCCCEEEE--eC
Confidence 3456788888876555664 3467777777766541111 11112223344444444331 11357888 89
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-hcC-------------CeEEEEecccCCC--CC--------
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSR-------------LNVGAYRYFDNKT--NG-------- 294 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G-------------~~~~~v~~~d~~~--~g-------- 294 (583)
+|++|.+.+..+.+.... ...|+..+-+|........ ..+ ..+..+|..+... .+
T Consensus 111 SGseA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (433)
T PRK08117 111 SGAEAIEGALKLAKHVTK-RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFL 189 (433)
T ss_pred cHHHHHHHHHHHHHHhcC-CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHH
Confidence 999999987665444433 4678887777766432211 111 0122333311100 01
Q ss_pred CChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH
Q psy14428 295 LDFAGMMEDIKAM--PERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA 371 (583)
Q Consensus 295 ~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~ 371 (583)
-+++.+++.+++. ..+..++++-.-+.-.|.+ .+++.+++|.++|++||+++|.||+|.+|...+. ......
T Consensus 190 ~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~---~~~~~~-- 264 (433)
T PRK08117 190 ECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE---WFAAQT-- 264 (433)
T ss_pred HHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc---chhHhh--
Confidence 0345566655431 2334444443333334554 5899999999999999999999999999866541 111111
Q ss_pred HhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 372 KEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 372 ~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
.+...-+.+|||.++ +|+++|++++ + +++++.+........++.+++++.++...++
T Consensus 265 --~gv~pDi~t~sK~lg-~G~pigav~~--~-----~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~ 321 (433)
T PRK08117 265 --FGVVPDIMTIAKGIA-SGLPLSAVVA--S-----KELMEQWPLGSHGTTFGGNPVACAAALATLE 321 (433)
T ss_pred --cCCCCCEeehhhhcc-CCCcceeEEE--c-----HHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 222233579999999 9999999999 6 5788777544444455678888888887775
No 248
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.31 E-value=3.1e-10 Score=119.20 Aligned_cols=191 Identities=12% Similarity=0.026 Sum_probs=134.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh-HHHHhhcC
Q psy14428 201 EYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH-VRFCTDSR 279 (583)
Q Consensus 201 ~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~-~~~~~~~G 279 (583)
.|..+....+|.++++++++. +.++. |++|+.|+.++ ....++|||.| ++++|... ...++..|
T Consensus 66 ~yag~~s~~~lE~~va~~~G~--------~~av~--v~sGT~Al~ll---~~l~l~pGDeV--psn~~f~Tt~ahIe~~G 130 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELYGF--------KYVVP--THQGRGAENLL---SQIAIKPGDYV--PGNMYFTTTRYHQEKNG 130 (450)
T ss_pred hhcCCCcHHHHHHHHHHHHCC--------CeEEE--cCCHHHHHHHH---HHhCCCCcCEE--CCceeHHHHHHHHHhCC
Confidence 588888899999999999975 35666 99999999975 34566779977 77877444 44478889
Q ss_pred CeEEEEecc--------cCCCCCCChhhHHHHHHcCC-CCcEEEEeCCCCCC-CCCCCCHHHHHHHHHHHHhcCeEEEEe
Q psy14428 280 LNVGAYRYF--------DNKTNGLDFAGMMEDIKAMP-ERSILFLQTSSHNP-TGVDLSEDQWRQLAVVVKQRHLYPFFD 349 (583)
Q Consensus 280 ~~~~~v~~~--------d~~~~g~d~~~l~~~l~~~~-~~~~~i~i~~p~NP-TG~~~s~~~~~~l~~~a~~~~i~iI~D 349 (583)
+..+.++.. ++.++.+|++.+++.+.... .++.++.+.+++|- .|.++|.++++++.++|++||+.||+|
T Consensus 131 av~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~D 210 (450)
T TIGR02618 131 ATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYD 210 (450)
T ss_pred eEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 977777541 13347789999999986432 24556777788885 589999999999999999999999999
Q ss_pred ccCCC----CC------CCCCCCchH-HHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 350 MAYLG----LT------SGDFDKDAF-SLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 350 e~Y~~----l~------~~~~~~~~~-~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
-+-.. |. +.+ .+.. -.+.+....| .+..|..|+++.|- -|+++. .+ ++++++++...
T Consensus 211 aAR~~gNA~~I~~re~g~~~--~~i~ei~~e~~~~aD--~~~~S~~Kd~~~~~--GG~l~~--~d----~~l~~k~r~~~ 278 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYED--KSIAEILKEMMSYAD--GCTMSGKKDCLVNI--GGFLCM--ND----DEMFQSAKELV 278 (450)
T ss_pred ccchhhChhhhhcccccccC--CCHHHHHHHHhccCc--EEEEeeccCCCCCC--ceEEEe--CC----HHHHHHHHHHh
Confidence 98643 21 222 1111 1123222222 27788889876551 155554 44 58888888764
No 249
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.31 E-value=9.6e-10 Score=117.49 Aligned_cols=297 Identities=11% Similarity=0.034 Sum_probs=168.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCC--CCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGED--FPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~--g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .+.+.+++.+.++.. .... ......+.+..+++.+.+.. +... .+++.+ -++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~-~~~~-~~~~~~~~~~~lae~l~~~~~~~~~~-~~~~~f-~~~ 106 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHN--NPKLKQALIDYLADD-GIIH-SLDMATEAKREFLETFNEIILKPRGL-DYKVQF-PGP 106 (412)
T ss_pred CCCEEEEcccchhhccCCCC--CHHHHHHHHHHHhhc-ccee-ccccCcHHHHHHHHHHHHhccCccCC-CceEEE-eCC
Confidence 45567888888776666643 477777777766431 0101 11112344455555554321 0001 124544 147
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cC------------CeEEEEecccCCCCC-CChhhHHHHH
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SR------------LNVGAYRYFDNKTNG-LDFAGMMEDI 304 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~d~~~~g-~d~~~l~~~l 304 (583)
+|++|.+.+..+.+.... ..+|+..+-+|.+....... .| ..++.+|..+..... -+++.+++.+
T Consensus 107 sGseA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~ 185 (412)
T TIGR02407 107 TGTNAVESALKLARKVTG-RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLL 185 (412)
T ss_pred CchHHHHHHHHHHhhhcC-CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHH
Confidence 899999987666555433 46788888888766433221 11 122334431100000 1355677766
Q ss_pred HcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 305 KAMP---ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 305 ~~~~---~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
++.. ++..++++..-+++.|. ..+++.+++|.++|+++|+++|+||++..|..-+ .......+ +..+. +
T Consensus 186 ~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~~~~-~v~PD---i 258 (412)
T TIGR02407 186 EDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG---TFFSFEPA-GIEPD---I 258 (412)
T ss_pred HhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhHHhccc-CCCCC---E
Confidence 5322 34567777777888998 6799999999999999999999999998775433 11111111 11223 3
Q ss_pred ecCccccccc-CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHH---HHHHH-HhCChhhhhhhhhHHHHHHH
Q psy14428 381 QSFSKNMGLY-GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGA---RIVTE-ILSDPKLKAQCDETERIMSQ 455 (583)
Q Consensus 381 ~S~SK~~~l~-GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q---~~~~~-~l~~~~~~~~~~~~~~~~~~ 455 (583)
.+|||.++ + |+|+|++++ + +++ +.+........++.++++. .++.+ +++++.+.++..+....+.+
T Consensus 259 ~~~~K~lg-~~G~pigav~~--~-----~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~ 329 (412)
T TIGR02407 259 VCLSKSIS-GYGLPLALTLI--K-----PEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQE 329 (412)
T ss_pred EEechhcc-CCccceeEEEE--c-----hhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 36899998 7 999999999 6 343 4443222233444555532 33444 47777777776665554443
Q ss_pred H-HHHHhhc---cCCCccchhhHHHHhcC
Q psy14428 456 L-KILIRGF---YSNPPIHGARIVTEILS 480 (583)
Q Consensus 456 l-~~~~r~~---~~~~p~~g~~i~~~~l~ 480 (583)
+ +.+.... ....+..|.++|..+..
T Consensus 330 ~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~ 358 (412)
T TIGR02407 330 RLDRIVAEYPELIKQVRGRGLMQGIECGD 358 (412)
T ss_pred HHHHHHhhCCCceEeeecceeEEEEEecC
Confidence 3 3332211 22345567777776644
No 250
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.31 E-value=2.4e-10 Score=120.28 Aligned_cols=208 Identities=13% Similarity=0.048 Sum_probs=149.9
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNV 282 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~ 282 (583)
-...|.+.+|+.-+. +..++ +++|+.|+..+ + ..++.+||.|++++..|.+....+ +..|+++
T Consensus 63 t~~~le~~la~LEg~--------~~a~~--~~SGmaAi~~~--~-~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v 129 (395)
T PRK08114 63 THFSLQEAMCELEGG--------AGCAL--YPCGAAAVANA--I-LAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTT 129 (395)
T ss_pred hHHHHHHHHHHHhCC--------CeEEE--EhHHHHHHHHH--H-HHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEE
Confidence 346778888886543 35556 77799999975 3 334567999999998997776654 5679988
Q ss_pred EEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccCCCCCCCCC
Q psy14428 283 GAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR--HLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 283 ~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~--~i~iI~De~Y~~l~~~~~ 360 (583)
..++. .|.+.+++.+ .++++++++.+|.||||.+.+ +++|+++|+++ ++++|+|.++.--..-.
T Consensus 130 ~~vd~-------~d~~~l~~~l---~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~- 195 (395)
T PRK08114 130 TWFDP-------LIGADIAKLI---QPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVLFK- 195 (395)
T ss_pred EEECC-------CCHHHHHHhc---CCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccccC-
Confidence 87754 1667777777 567899999999999999887 55667778887 59999999985422111
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+...+--|++.|.+|.++-+| +-.|.++. . +++.+.+.........+.++...+.+.+-++.
T Consensus 196 ----------pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~--~-----~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T 258 (395)
T PRK08114 196 ----------ALDFGIDISIQAGTKYLVGHSDAMIGTAVA--N-----ARCWEQLRENSYLMGQMVDADTAYMTSRGLRT 258 (395)
T ss_pred ----------HHHcCCcEEEEcCcccccCCCcceeEEEEc--C-----HHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc
Confidence 122356699999999887666 56665554 3 35666676666667778888888888888875
Q ss_pred --hhhhhhhhhHHHHHHHHHH
Q psy14428 440 --PKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 440 --~~~~~~~~~~~~~~~~l~~ 458 (583)
-.+++|.++...+.+.++.
T Consensus 259 L~lR~~~~~~na~~va~~L~~ 279 (395)
T PRK08114 259 LGVRLRQHEESSLKVAEWLAE 279 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 4567777776666666543
No 251
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.29 E-value=4.2e-10 Score=118.19 Aligned_cols=209 Identities=16% Similarity=0.149 Sum_probs=149.2
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~ 283 (583)
...|.+.+++..+. +..++ ++.|..|+..+ +..++++||.|+++...|......++. .|+++.
T Consensus 57 ~~~le~~la~Le~g--------~~a~~--~~SGmaAi~~~---l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~ 123 (386)
T PF01053_consen 57 VRALEQRLAALEGG--------EDALL--FSSGMAAISAA---LLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVT 123 (386)
T ss_dssp HHHHHHHHHHHHT---------SEEEE--ESSHHHHHHHH---HHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEE
T ss_pred HHHHHHHHHHhhcc--------cceee--ccchHHHHHHH---HHhhcccCCceEecCCccCcchhhhhhhhcccCcEEE
Confidence 36688888887753 56777 88899999875 445567799999999999998776654 588887
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-eEEEEeccCCCCCCCCCCC
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRH-LYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~-i~iI~De~Y~~l~~~~~~~ 362 (583)
.++. . |++.+++++ .++++++++-+|.||+..+.+ +++|+++|+++| +++|+|+.+.....-.
T Consensus 124 ~~d~---~----d~~~l~~~l---~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~~--- 187 (386)
T PF01053_consen 124 FVDP---T----DLEALEAAL---RPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQN--- 187 (386)
T ss_dssp EEST---T----SHHHHHHHH---CTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC----
T ss_pred EeCc---h----hHHHHHhhc---cccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeeec---
Confidence 7744 2 788999988 679999999999999966664 677788899998 9999999986543221
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccCcc-ceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC--
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYGER-VGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD-- 439 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR-iG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~-- 439 (583)
++ ..+--|++.|.+|.++-.|-- .|.+++ .+. +++.++++..........++...+.+.+-+.+
T Consensus 188 ---pL-----~~GaDivv~S~TKyl~Ghsdv~~G~vv~--~~~---~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl~ 254 (386)
T PF01053_consen 188 ---PL-----ELGADIVVHSATKYLSGHSDVMGGAVVV--NGS---SELYDRLREFRRLLGATLSPFDAWLLLRGLRTLP 254 (386)
T ss_dssp ---GG-----GGT-SEEEEETTTTTTTSSSE-EEEEEE--SSH---HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTHH
T ss_pred ---cC-----cCCceEEEeeccccccCCcceeeEEEEE--Cch---hhhhhhhcchhhhcCccchHHHHHHHhcCCCcHH
Confidence 11 124468899999998644433 566666 432 47888888888888888899999988888886
Q ss_pred hhhhhhhhhHHHHHHHHHH
Q psy14428 440 PKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 440 ~~~~~~~~~~~~~~~~l~~ 458 (583)
-.++++.++.+++.+.++.
T Consensus 255 ~R~~~~~~nA~~lA~~L~~ 273 (386)
T PF01053_consen 255 LRMERQNENAEALAEFLEE 273 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3466666666666655543
No 252
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.26 E-value=7.9e-10 Score=116.71 Aligned_cols=204 Identities=11% Similarity=-0.012 Sum_probs=120.4
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccC-----CCCCCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-----LDHEYA----NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-----~~~~Y~----~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
..++|+..++-+-...|.+.+.+.+++.+...+. ...+.. ...-..++|+.+|++++.. +-++.
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-------~~l~~ 77 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-------EAFIV 77 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-------eEEEE
Confidence 4677776666433333333445555554442110 011111 2233578899999988642 23666
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC---CCc
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP---ERS 311 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~---~~~ 311 (583)
++|....+. ++..+..+||.|++..-.+......++......+.++. .|++.+++.++... +.+
T Consensus 78 --~sG~~a~~~----~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 78 --PSGYMANLG----LCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred --CChHHHHHH----HHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCc
Confidence 777743332 23344555777776555565555555554433333322 37888888886432 346
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC
Q psy14428 312 ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG 391 (583)
Q Consensus 312 ~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G 391 (583)
+++++++++|+||.+.+ +++|.++|+++++++++||++..-.++.. .......+ ...+..+.+.||||.+|..|
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~--g~g~~~~~-~~~~~~~~~~tlsK~~g~~G 218 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDD--GKGFCHSL-GYENFYAVLVTYSKALGSMG 218 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC--CCchHHhh-CCCCCcEEEEechhhhhcCc
Confidence 67788999999999998 55667888999999999999986433310 00011111 11122367899999999777
Q ss_pred cc
Q psy14428 392 ER 393 (583)
Q Consensus 392 lR 393 (583)
.+
T Consensus 219 ~~ 220 (370)
T PRK05937 219 AA 220 (370)
T ss_pred eE
Confidence 43
No 253
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.25 E-value=4.4e-10 Score=118.30 Aligned_cols=191 Identities=12% Similarity=0.002 Sum_probs=127.8
Q ss_pred HHHHHHHHHhccCCCCCCCC-CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEE
Q psy14428 185 SVKEAERRIYEKNLDHEYAN-IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYF 263 (583)
Q Consensus 185 ~v~~a~~~~~~~~~~~~Y~~-~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv 263 (583)
.-.+++.++++.+ .++. ..-..+|.+++++|++. ++.+. ++.|+.|+.++... .-.++||+|++
T Consensus 6 e~~~~v~~~l~s~---~~~~~g~~~~~fE~~~a~~~g~--------~~~~~--~~sgt~Al~~al~~--l~~~~gdeVi~ 70 (363)
T PF01041_consen 6 EEIDAVLEVLRSG---WLSTYGPYVEEFEKEFAEYFGV--------KYAVA--VSSGTSALHLALRA--LGLGPGDEVIV 70 (363)
T ss_dssp HHHHHHHHHHHHT---CCSSSSHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHH--TTGGTTSEEEE
T ss_pred HHHHHHHHHHHhC---CccCCCHHHHHHHHHHHHHhCC--------CeEEE--eCChhHHHHHHHHh--cCCCcCceEec
Confidence 3445555555543 2222 33468999999999975 45666 88899999996322 22256999999
Q ss_pred cCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q psy14428 264 PTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRH 343 (583)
Q Consensus 264 ~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~ 343 (583)
|.-+|......+...|++++.+++ |++++.+|++.+++.+ +++++++++.+. -| ...++.+|.++|+++|
T Consensus 71 p~~t~~~~~~ai~~~G~~pv~~Di-~~~~~~id~~~~~~~i---~~~t~ai~~~h~---~G---~~~d~~~i~~~~~~~~ 140 (363)
T PF01041_consen 71 PAYTFPATASAILWAGAEPVFVDI-DPETLNIDPEALEKAI---TPKTKAILVVHL---FG---NPADMDAIRAIARKHG 140 (363)
T ss_dssp ESSS-THHHHHHHHTT-EEEEE-B-ETTTSSB-HHHHHHHH---HTTEEEEEEE-G---GG---B---HHHHHHHHHHTT
T ss_pred CCCcchHHHHHHHHhccEEEEEec-cCCcCCcCHHHHHHHh---ccCccEEEEecC---CC---CcccHHHHHHHHHHcC
Confidence 999999999999999999999999 7888999999999998 566777775332 23 2236888999999999
Q ss_pred eEEEEeccCCCCCC-CCCCCchHHHHHHHHhcCcEEEEecC--cccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 344 LYPFFDMAYLGLTS-GDFDKDAFSLRYFAKEVGQLCLAQSF--SKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 344 i~iI~De~Y~~l~~-~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
++||||.+...... .+ . .+ ... ..+.+.|| +|.+. .---|.++. .+ +++.++++.+.
T Consensus 141 i~lIeD~a~a~g~~~~g--~---~~----G~~-gd~~~fSf~~~K~i~--~geGG~v~~--~~----~~~~~~~~~~~ 200 (363)
T PF01041_consen 141 IPLIEDAAQAFGARYKG--R---PV----GSF-GDIAIFSFHPTKIIT--TGEGGAVVT--ND----PELAERARALR 200 (363)
T ss_dssp -EEEEE-TTTTT-EETT--E---ET----TSS-SSEEEEESSTTSSS---SSS-EEEEE--ST----HHHHHHHHHHT
T ss_pred CcEEEccccccCceeCC--E---ec----cCC-CCceEecCCCCCCCc--CCCCeeEEe--cH----HHHHHHhhhhh
Confidence 99999999876442 22 0 01 111 24566666 68773 444588888 65 46777777653
No 254
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.25 E-value=2.5e-09 Score=111.36 Aligned_cols=217 Identities=15% Similarity=0.096 Sum_probs=147.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-C-----CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-N-----LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~-----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
....+||+..++- |.. ..+.+.++..+.++. + .-+-++...=..+|.+.+|+|++.. +-++.
T Consensus 38 ~~~~~nf~SNdYL---GLa-~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e-------~al~f- 105 (388)
T COG0156 38 GRKVLNFCSNDYL---GLA-SHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAE-------AALLF- 105 (388)
T ss_pred CceeEeeeccCcc---ccc-CCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC-------cEEEE-
Confidence 4567888887763 322 234566666655544 1 1122333444578999999999753 44555
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC-C--CcE
Q psy14428 236 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-E--RSI 312 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-~--~~~ 312 (583)
++|=..-+. ++..++.++|.|+...-.......-++..+++++.+.- -|++.+++.+++.. . +.+
T Consensus 106 -~SGy~AN~~----~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~ 173 (388)
T COG0156 106 -SSGFVANLG----LLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRK 173 (388)
T ss_pred -cccchhHHH----HHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCce
Confidence 555544443 35567777999998888888888888888998877643 18899999987631 1 345
Q ss_pred EEEeCCCCCCCCCCCC----HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcccc
Q psy14428 313 LFLQTSSHNPTGVDLS----EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSKNM 387 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~s----~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~ 387 (583)
+|+ |-.++| ...+.+|++++++|+.++++||+|+--.+++. ..-....+. ...+..|.++||||.|
T Consensus 174 ~Iv-------tegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~--GrG~~e~~g~~~~~vdi~~gTlsKAl 244 (388)
T COG0156 174 LIV-------TEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPN--GRGLAEHFGLEPEEVDIIVGTLGKAL 244 (388)
T ss_pred EEE-------EeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCC--CccHHHHhCCCCccceEEEEEchhhh
Confidence 555 333333 34688889999999999999999998777742 111222321 1234589999999999
Q ss_pred cccCccceEEEEEcCCchhHHHHHHHHHHHHhcc
Q psy14428 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIRGF 421 (583)
Q Consensus 388 ~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~ 421 (583)
|..| ||+.+ + ..+++.+....+..
T Consensus 245 Gs~G---g~v~g--~-----~~~~d~L~~~ar~~ 268 (388)
T COG0156 245 GSSG---GYIAG--S-----AALIDYLRNRARPF 268 (388)
T ss_pred cccC---ceeeC--c-----HHHHHHHHHhCCce
Confidence 9888 89998 6 68999998875555
No 255
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.25 E-value=5.6e-09 Score=112.12 Aligned_cols=271 Identities=12% Similarity=0.070 Sum_probs=149.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK-DNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~-~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+.. ..... ..-..+.+..+++.+.+....+-. .+++.+ -++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~---~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f-~~~ 110 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHN--NPVLKQALIDYLQRDGITHG---LDMHTTAKREFLETFEETILKPRGLDYKVQF-TGP 110 (425)
T ss_pred CCCEeeecccchhhccCCCC--CHHHHHHHHHHHHhcccccc---cccCcHHHHHHHHHHHHhhcCCcCCCceEEE-eCC
Confidence 45567888888776666653 46777777665543 11111 111123444455554432100001 124544 147
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc----------C---CeEEEEecccCCCCC-CChhhHHHHH
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS----------R---LNVGAYRYFDNKTNG-LDFAGMMEDI 304 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~----------G---~~~~~v~~~d~~~~g-~d~~~l~~~l 304 (583)
+|++|.+.+..+.+.... ..+|+...-+|.+.....-.. + ..+..+|..+..... -|++.+++.+
T Consensus 111 sGseA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l 189 (425)
T PRK09264 111 TGTNAVEAALKLARKVTG-RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLL 189 (425)
T ss_pred CHHHHHHHHHHHHHHhcC-CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHH
Confidence 899999988666655533 467888888877653321111 1 123444441110000 1566777777
Q ss_pred HcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 305 KAMP---ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 305 ~~~~---~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
++.. +...++++-.-+.-.|. +++++.+++|.++|++||+++|+||++.+|...+ .......+ +..+. +
T Consensus 190 ~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG---~~~~~~~~-~v~PD---i 262 (425)
T PRK09264 190 EDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG---TFFSFERA-GITPD---I 262 (425)
T ss_pred HhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc---HHHHHhhc-CCCCC---E
Confidence 5432 23445554333444564 6789999999999999999999999998875443 11122221 11223 3
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHH----HHhCChhhhhhhhhHHHHH
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVT----EILSDPKLKAQCDETERIM 453 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~----~~l~~~~~~~~~~~~~~~~ 453 (583)
-+|||.++..|+++|++++ + +++ ..+........++.++++..++. .+++++.+.++.+.....+
T Consensus 263 ~t~~K~l~~~G~pigav~~--~-----~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l 331 (425)
T PRK09264 263 VTLSKSISGYGLPMALVLI--K-----PEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELV 331 (425)
T ss_pred EEeccccCCCccceEEEEE--c-----hhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4779999944999999999 6 244 33332222223444445544443 3345555555555554433
No 256
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.25 E-value=7.6e-10 Score=117.12 Aligned_cols=173 Identities=16% Similarity=0.134 Sum_probs=133.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCCC-CCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCCh----hhHHHHhhcCCe
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFK-DNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWN----GHVRFCTDSRLN 281 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~-~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~----~~~~~~~~~G~~ 281 (583)
-+++.|+.+|++++. + .++|++ |.|+++++.+++..+.....+||+|++.+-.++ ++....+..|++
T Consensus 67 ~~e~aRe~va~~~~a------~~~~eIvf--t~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~ 138 (405)
T COG0520 67 LYEAAREAVARFLNA------DSSDEIVF--TRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAK 138 (405)
T ss_pred HHHHHHHHHHHHhCC------CCCCeEEE--eCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcE
Confidence 357889999999863 4 489999 999999999976554332566999999887654 345566667999
Q ss_pred EEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCC
Q psy14428 282 VGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFD 361 (583)
Q Consensus 282 ~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~ 361 (583)
++.+|+ + ++..++.+.++..+ +++++++.++.-+|-||.+.+ +++|+++|+++|+++++|-+.+-=...
T Consensus 139 v~~i~~-~-~~g~~~~~~~~~~i---~~~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~~--- 207 (405)
T COG0520 139 VRVIPL-D-DDGLLDLDALEKLI---TPKTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHLP--- 207 (405)
T ss_pred EEEEec-C-CCCCcCHHHHHHhc---CCCceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECccccCccC---
Confidence 999999 5 45788999998866 789999999999999999987 667799999999999999985322211
Q ss_pred CchHHHHHHHHhcCcEEEEecCcc-cccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 362 KDAFSLRYFAKEVGQLCLAQSFSK-NMGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~vi~i~S~SK-~~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
..+ +..+.-++..|--| .+|-.| +|.+.+ . +++++.+
T Consensus 208 ---idv----~~l~~Df~afsgHKwl~gP~G--iGvLy~--r-----~~~l~~l 245 (405)
T COG0520 208 ---IDV----QELGCDFLAFSGHKWLLGPTG--IGVLYV--R-----KELLEEL 245 (405)
T ss_pred ---CCc----hhcCCCEEEEcccccccCCCc--eEEEEE--c-----hHHHhhc
Confidence 112 22356788999999 666336 699999 6 5788777
No 257
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.24 E-value=1.6e-09 Score=115.94 Aligned_cols=215 Identities=13% Similarity=0.066 Sum_probs=143.0
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH----HHHhhcCCeEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV----RFCTDSRLNVG 283 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~ 283 (583)
...|++.+|++.+. .+.|++ ++|. .|+.++ +..+.++||+|++++..|.... ..++..|++++
T Consensus 71 ~~~le~~la~l~g~-------~~~v~f--sSG~-~Ai~~a---l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~ 137 (437)
T PRK05613 71 VEALENRIASLEGG-------VHAVAF--ASGQ-AAETAA---ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVT 137 (437)
T ss_pred HHHHHHHHHHHhCC-------CeEEEe--CCHH-HHHHHH---HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEE
Confidence 47788888888753 245555 5555 777654 3344577999999999998874 34577899998
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.++. +. |++.+++.+ +++++++++.++.||+|.+.+ +++|.++|+++|+++|+|.++..-..-.
T Consensus 138 ~vd~--~~----d~e~l~~~l---~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~~~---- 201 (437)
T PRK05613 138 FVEN--PD----DPESWQAAV---QPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAALVR---- 201 (437)
T ss_pred EECC--CC----CHHHHHHhC---CccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccccC----
Confidence 8862 21 778888777 567888888999999998877 5566778889999999999974422111
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCch--------------------h---------HHHHH-HH
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSD--------------------E---------TERIM-SQ 413 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~--------------------~---------~~~li-~~ 413 (583)
++ ..+--+++.|++|.++-.|.-+|-+++..++-+ . .+.++ +.
T Consensus 202 --p~-----~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (437)
T PRK05613 202 --PL-----ELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKA 274 (437)
T ss_pred --hH-----HhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHH
Confidence 11 124568899999999866776666555211100 0 00111 11
Q ss_pred HHHHHhccccCCChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHHH
Q psy14428 414 LKILIRGFYSNPPIHGARIVTEILSD--PKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 414 l~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~~ 458 (583)
..........+.+++..+.+.+-++. -.++++.++..++.+.++.
T Consensus 275 ~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~ 321 (437)
T PRK05613 275 RAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNN 321 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHc
Confidence 22334455677788888888887775 3566776666666665543
No 258
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.24 E-value=2.9e-09 Score=112.29 Aligned_cols=191 Identities=13% Similarity=0.005 Sum_probs=130.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCCh-hhHHHHhhc
Q psy14428 200 HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWN-GHVRFCTDS 278 (583)
Q Consensus 200 ~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~-~~~~~~~~~ 278 (583)
-.|.......+|.++++++++.+ .++. |+.|+.|++++ +...+++||.| +..++. .....+...
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~e--------~aV~--v~sGTaAl~ll---~~l~v~pGd~V--p~n~~f~Tt~ahI~~~ 136 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGFK--------HVVP--THQGRGAENLL---SRIAIKPGQYV--PGNMYFTTTRYHQELN 136 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCCC--------eEEE--eCCHHHHHHHH---HHhCCCCcCEE--CCccchHhhHHHHHhC
Confidence 45888888999999999999764 3555 88999999984 33456679965 444343 334437778
Q ss_pred CCeEEEEec--------ccCCCCCCChhhHHHHHHcC-CCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 279 RLNVGAYRY--------FDNKTNGLDFAGMMEDIKAM-PERSILFLQTSSHNPT-GVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 279 G~~~~~v~~--------~d~~~~g~d~~~l~~~l~~~-~~~~~~i~i~~p~NPT-G~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
|+..+.+.. .++.++.+|++.+++.+... .+++.++.+.+++|-. |...|.++++++.++|+++|+.||+
T Consensus 137 Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~ 216 (460)
T PRK13237 137 GGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFF 216 (460)
T ss_pred CcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEE
Confidence 886655532 02445789999999999643 2345566677788998 6899999999999999999999999
Q ss_pred eccCC-C---CC------CCCCCCchH-HHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 349 DMAYL-G---LT------SGDFDKDAF-SLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 349 De~Y~-~---l~------~~~~~~~~~-~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
|-+.. + |. |.+ .+.. -.+.+.. . --+...|++|+++.+- -|+++. .+ +++.++++..
T Consensus 217 DaAra~gna~fI~~re~~y~~--~~i~ei~~e~~s-~-aD~~t~S~~K~~~~~~--GG~i~t--~D----~eL~~~~r~~ 284 (460)
T PRK13237 217 DATRCVENAYFIKEREEGYQD--KSIKEIVHEMFS-Y-ADGCTMSGKKDCLVNI--GGFLAM--ND----EELFDEAKEL 284 (460)
T ss_pred ECcchhcChhhhcccccccCC--CcHhHHhhhccC-c-CcEEEEeCCCCCCCCC--ceEEEE--CC----HHHHHHHHHh
Confidence 99864 2 11 222 1110 0111111 1 2345667999987432 377777 55 5788888765
No 259
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=1.9e-09 Score=116.27 Aligned_cols=255 Identities=13% Similarity=0.028 Sum_probs=155.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+++. ..+....+..+.+..+|+.+....... ..+++.+ +++|
T Consensus 54 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~--~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f--~~sG 126 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNS--APRVVEAVREQVARF--THTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSAL--FNSG 126 (443)
T ss_pred CCCEEEEcCcchhhhccCCC--CHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCC-CCCEEEE--eCCc
Confidence 45567888888776666643 467777777766542 122222234466666777775433211 1247787 8888
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-C--------C-----eEEEEecccCCCC----CCCh-hh--
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-R--------L-----NVGAYRYFDNKTN----GLDF-AG-- 299 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G--------~-----~~~~v~~~d~~~~----g~d~-~~-- 299 (583)
++|.+.+..+.+.... .++|+..+++|.+........ + . .+..+|.....+. ..+. +.
T Consensus 127 seA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (443)
T PRK06058 127 AEAVENAVKIARSYTG-RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAA 205 (443)
T ss_pred HHHHHHHHHHHHHhhC-CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHH
Confidence 9999987666555544 578999999998875433221 1 0 1222222111000 0000 11
Q ss_pred -HHHHHHcC-CCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcC
Q psy14428 300 -MMEDIKAM-PERSILFLQTSSHNPTGVDL--SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVG 375 (583)
Q Consensus 300 -l~~~l~~~-~~~~~~i~i~~p~NPTG~~~--s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 375 (583)
..+.+++. .......++..|-++.|.+. +++-+++|.++|++||+++|.||++.+|...+ ....... .+-.+
T Consensus 206 ~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG---~~fa~~~-~gv~P 281 (443)
T PRK06058 206 RAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTG---AWFACEH-EGIVP 281 (443)
T ss_pred HHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCh---hhhHHHh-cCCCC
Confidence 11222221 22334445568888887544 58899999999999999999999999886544 1111211 12223
Q ss_pred cEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 376 QLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 376 ~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
.++ +++|.++ .|+++|++++ + +++++.+........++.+++++.++.+.++
T Consensus 282 Div---~~gK~l~-~G~Pi~av~~--~-----~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 333 (443)
T PRK06058 282 DLI---TTAKGIA-GGLPLSAVTG--R-----AEIMDAPHPGGLGGTYGGNPVACAAALAAIE 333 (443)
T ss_pred CEE---EEccccc-CCCccEEEEE--c-----HHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 344 4489999 9999999999 6 5788877654444566788999888888764
No 260
>PRK04311 selenocysteine synthase; Provisional
Probab=99.22 E-value=2.7e-09 Score=114.65 Aligned_cols=219 Identities=16% Similarity=0.129 Sum_probs=142.0
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC---CC--CHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI---GG--DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~---~G--~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
..||.+.-....+.+.+..++.+.+++.+.........|.-. .| +..+++.+|++.+. +..++ ++
T Consensus 80 ~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--------e~a~v--v~ 149 (464)
T PRK04311 80 PVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--------EDALV--VN 149 (464)
T ss_pred ceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--------CeEEE--EC
Confidence 345544333333445555678888888777754322233221 12 36788889888753 34566 77
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChh------hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcE
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG------HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSI 312 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~------~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~ 312 (583)
+++.|+.++ +..+ .+||+|++++..+.. ....++..|++++.++. +. ..+++++++++ +++++
T Consensus 150 sgtaAl~l~---l~~l-~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~-~~---~t~~~dle~aI---~~~Tk 218 (464)
T PRK04311 150 NNAAAVLLA---LNAL-AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGT-TN---RTHLRDYEQAI---NENTA 218 (464)
T ss_pred CHHHHHHHH---HHHh-CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECC-CC---CCCHHHHHHhc---CccCe
Confidence 778898875 3444 559999998764321 23456778999998876 22 23678888877 67789
Q ss_pred EEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCC----CCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 313 LFLQTSSHNPT--GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLT----SGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 313 ~i~i~~p~NPT--G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~----~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
++++.+++||+ |.. ..-.+++|+++|+++|+++|+|...+-+. ++-. ..+.+....+ .+--+++.|..|.
T Consensus 219 lV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~--~~p~~~~~l~-~GaDiv~fSg~K~ 294 (464)
T PRK04311 219 LLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLP--DEPTVQELLA-AGVDLVTFSGDKL 294 (464)
T ss_pred EEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCC--CCCchhhHHh-cCCcEEEecCccc
Confidence 99999999994 421 22347788999999999999999643331 2100 0112222222 3456899999999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
+|-| ..|++++ . +++++++++
T Consensus 295 LgGp--~~G~i~g--~-----~~li~~l~~ 315 (464)
T PRK04311 295 LGGP--QAGIIVG--K-----KELIARLKK 315 (464)
T ss_pred ccCC--ceEEEEE--c-----HHHHHHHhh
Confidence 8644 5899998 5 578887774
No 261
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.17 E-value=2.3e-09 Score=112.92 Aligned_cols=205 Identities=16% Similarity=0.123 Sum_probs=130.9
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH----HHHhhcCCe
Q psy14428 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV----RFCTDSRLN 281 (583)
Q Consensus 206 ~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~ 281 (583)
+-..+|.+.++++.+. +..++ +++|+.|+.++ +..+..+||+|+++.+.|.... ..+...|++
T Consensus 64 P~~~~lE~~la~leg~--------~~av~--~sSG~aAi~~a---l~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~ 130 (384)
T PRK06434 64 PTVQAFEEKYAVLENA--------EHALS--FSSGMGAITSA---ILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIH 130 (384)
T ss_pred hhHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH---HHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcE
Confidence 3357788888888764 34555 77888999986 3344667999999987655544 566778999
Q ss_pred EEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCC
Q psy14428 282 VGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFD 361 (583)
Q Consensus 282 ~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~ 361 (583)
++.+++ ++. ..++ + ..++++++++.+|.|||+.+. ++++|.++|++++ +++|.++..-....
T Consensus 131 v~fvd~-~~~-~~~~-------l--~~~~tklv~~e~~snpt~~v~---Di~~I~~la~~~~--lvVD~t~~s~~~~~-- 192 (384)
T PRK06434 131 VDYIDT-DRL-NSLD-------F--DPSNYDLIYAESITNPTLKVP---DIKNVSSFCHEND--VIVDATFASPYNQN-- 192 (384)
T ss_pred EEEECC-CCh-hhee-------e--cCCCeeEEEEEcCCCCCceee---cHHHHHHHHHHcC--eEEECCCCCcccCC--
Confidence 999987 321 1111 1 124688999999999999875 5677788888888 45599964221111
Q ss_pred CchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC-
Q psy14428 362 KDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD- 439 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~- 439 (583)
++ + .+--+++.|.+|.++-+| .=.|.++. .+ +++.++++..........+.+..+.+..-|+.
T Consensus 193 ----pl----~-~gaDivv~S~tK~i~G~~d~~gG~vv~--~~----~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL 257 (384)
T PRK06434 193 ----PL----D-LGADVVIHSATKYISGHSDVVMGVAGT--NN----KSIFNNLVERRKTLGSNPDPIQAYLALRGLKTL 257 (384)
T ss_pred ----ch----h-cCCCEEEeecccccCCCCCceEEEEec--Cc----HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcH
Confidence 22 1 234678888999997555 44566655 43 36777776554445555666665655555553
Q ss_pred -hhhhhhhhhHHHHHHHH
Q psy14428 440 -PKLKAQCDETERIMSQL 456 (583)
Q Consensus 440 -~~~~~~~~~~~~~~~~l 456 (583)
..++++.+....+.+.+
T Consensus 258 ~~R~~r~~~~a~~~a~~L 275 (384)
T PRK06434 258 GLRMEKHNKNGMELARFL 275 (384)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 33444444444443333
No 262
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.12 E-value=1.4e-08 Score=109.61 Aligned_cols=265 Identities=12% Similarity=0.052 Sum_probs=153.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC-CC-CCCCCCCCHHHHHHHHHHHhCCCCCCCCCCC-eEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DH-EYANIGGDAKFCKLAAQLAYGEDFPAFKDNR-LAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~-~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~-I~i~~t 237 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+.... .. .|.+ .+.+..+|+.+...........+ ++. +
T Consensus 37 dG~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~~~~----~~~~~~lae~L~~~~p~~~~~~~~~f~--~ 108 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHN--HPNMKQKILDYLQSGLPLHTLDLT----TPLKDAFIEALLNIIPKRKMDYKLQFP--G 108 (442)
T ss_pred CCCEEEEccccHhhhcCCCC--CHHHHHHHHHHHHhccCccccccC----cHHHHHHHHHHHHhCCCcCCCccEEEe--C
Confidence 45567899888877666653 4677777776665421 11 1112 24455555555443211101123 444 6
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-C------------CeEEEEecccCCC--CCC----Chh
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-R------------LNVGAYRYFDNKT--NGL----DFA 298 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G------------~~~~~v~~~d~~~--~g~----d~~ 298 (583)
++|++|.+.+..+.+.... ..+|+...-+|.......... | ..+..+|..+... ++. +.+
T Consensus 109 ~sGsEA~e~AlklAr~~tg-r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 109 PSGADAVEAAIKLAKTYTG-RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSN 187 (442)
T ss_pred CCHHHHHHHHHHHHHHhcC-CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHH
Confidence 8899999988666655533 467888888887765433322 1 0123333311100 000 111
Q ss_pred ----hHHHHHHc---C-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH
Q psy14428 299 ----GMMEDIKA---M-PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF 370 (583)
Q Consensus 299 ----~l~~~l~~---~-~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~ 370 (583)
.+++.++. . .+...+++-|.++|+.....+++.+++|.++|++||+++|.||++.+|...+ .......+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~~ 264 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG---TMFAFEHA 264 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHHc
Confidence 12333321 1 2334555556666665566899999999999999999999999999997654 23333332
Q ss_pred HHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---Chhhhhhhh
Q psy14428 371 AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCD 447 (583)
Q Consensus 371 ~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~ 447 (583)
+-.+.+++ +||.++. |+++|++++ + ++ ++.+........++.+++++.++.+.|+ ++.+..+.+
T Consensus 265 -gv~PDiv~---~gK~l~~-G~Pigav~~--~-----~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~ 331 (442)
T TIGR00709 265 -GIEPDFVV---MSKAVGG-GLPLAVLLI--A-----PE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQ 331 (442)
T ss_pred -CCCCcEEE---EcccccC-CcccEEEEE--c-----hH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 22233444 7999994 999999999 6 34 3433222223456778888888877764 334444444
Q ss_pred hHH
Q psy14428 448 ETE 450 (583)
Q Consensus 448 ~~~ 450 (583)
++.
T Consensus 332 ~~g 334 (442)
T TIGR00709 332 ERG 334 (442)
T ss_pred HHH
Confidence 333
No 263
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.11 E-value=7.1e-08 Score=104.06 Aligned_cols=255 Identities=15% Similarity=0.071 Sum_probs=148.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++... .+.......+....+++.+...... -..++|.+ +++|
T Consensus 40 dG~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~lae~L~~~~p~-~~~~~v~f--~~SG 112 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHA--PPRVVEAIKAQADKFI--HYTPAYMYHEPLVRLAKKLCELAPG-DFEKRVTF--GLSG 112 (445)
T ss_pred CCCEEEECCccHHhhcCCCC--CHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEE--CCch
Confidence 34566888777766556643 4677777776665421 1111111123334444444332110 01258899 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-hhcC-------------CeEEEEecccCCC--CC-CC-------
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TDSR-------------LNVGAYRYFDNKT--NG-LD------- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G-------------~~~~~v~~~d~~~--~g-~d------- 296 (583)
++|.+.+..+.+.... ...|+..+-+|.+..... ...+ ..++.+|..+... ++ .+
T Consensus 113 seA~e~AiklAr~~tg-r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (445)
T PRK08593 113 SDANDGIIKFARAYTG-RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEY 191 (445)
T ss_pred HHHHHHHHHHHHHhhC-CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHH
Confidence 9999987666555543 456887777777653222 1111 1123344311100 00 01
Q ss_pred hhhHHHHHHcC--CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh
Q psy14428 297 FAGMMEDIKAM--PERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE 373 (583)
Q Consensus 297 ~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~ 373 (583)
++.+++.+++. .++..++++-..+...|.. .+++-+++|.++|++||+++|.||++..|...+ .......+ +-
T Consensus 192 ~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG---~~~a~~~~-gv 267 (445)
T PRK08593 192 LAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTG---KWSSISHF-NI 267 (445)
T ss_pred HHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hHHHHHhc-CC
Confidence 12333333321 2456666666667777776 789999999999999999999999998885443 11122221 11
Q ss_pred cCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 374 VGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 374 ~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
.+. +-+|||.++ .|+++|++++ + +++++.+........++.+++++.++...++
T Consensus 268 ~pD---i~t~gK~l~-~G~p~gav~~--~-----~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~ 321 (445)
T PRK08593 268 TPD---LMSFGKSLA-GGMPMSAIVG--R-----KEIMESLEAPAHLFTTGANPVSCAAALATID 321 (445)
T ss_pred CCC---Eeeeccccc-CCcccEEEEE--c-----HHHHhhhccCCCCCCCCCCHHHHHHHHHHHH
Confidence 222 347899998 8999999999 6 5788877533223355567777776655553
No 264
>KOG0053|consensus
Probab=99.10 E-value=1e-08 Score=105.35 Aligned_cols=206 Identities=17% Similarity=0.143 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cCCeEEE
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SRLNVGA 284 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~ 284 (583)
..|.+.+++..+. .+.++ .+.|..|+.. .+..++++|+.|+..+..|.....+++. .|++...
T Consensus 80 ~~le~~iaal~ga--------~~~l~--fsSGmaA~~~---al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~ 146 (409)
T KOG0053|consen 80 DVLESGIAALEGA--------AHALL--FSSGMAAITV---ALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDF 146 (409)
T ss_pred HHHHHHHHHHhCC--------ceEEE--ecccHHHHHH---HHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeee
Confidence 4566666666543 23666 7777778777 4566788899999999999998777654 4676666
Q ss_pred EecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCch
Q psy14428 285 YRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDA 364 (583)
Q Consensus 285 v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~ 364 (583)
+++. +++.+++++ .++++++++-+|.||+..+.+. ++|.++|++++++||+|+.+....+-+
T Consensus 147 vd~~-------~~~~~~~~i---~~~t~~V~~ESPsNPll~v~DI---~~l~~la~~~g~~vvVDnTf~~p~~~~----- 208 (409)
T KOG0053|consen 147 VDVD-------DLKKILKAI---KENTKAVFLESPSNPLLKVPDI---EKLARLAHKYGFLVVVDNTFGSPYNQD----- 208 (409)
T ss_pred echh-------hHHHHHHhh---ccCceEEEEECCCCCccccccH---HHHHHHHhhCCCEEEEeCCcCcccccC-----
Confidence 6541 566777776 5689999999999999988875 455666779999999999998775432
Q ss_pred HHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCCh--hh
Q psy14428 365 FSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDP--KL 442 (583)
Q Consensus 365 ~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~--~~ 442 (583)
++ ..+--|++.|.+|.+|-.+-=+|=+++. .. +++.++++..+.....+.+++..+...+-+..- .+
T Consensus 209 -pL-----~lGADIV~hSaTKyi~Ghsdvi~G~iv~-n~----~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglktl~lRi 277 (409)
T KOG0053|consen 209 -PL-----PLGADIVVHSATKYIGGHSDVIGGSVVL-NS----EELASRLKFLQEDLGWCEDPFDLFLLSRGLKTLHLRI 277 (409)
T ss_pred -hh-----hcCCCEEEEeeeeeecCCcceeeeEEec-Cc----HHHHHHHHHHHHHhcCCCCHHHHHHHhcCcchhhhhH
Confidence 11 1245689999999996555445544441 22 589999999998888899998888777777643 34
Q ss_pred hhhhhhHHHHHHHH
Q psy14428 443 KAQCDETERIMSQL 456 (583)
Q Consensus 443 ~~~~~~~~~~~~~l 456 (583)
+++.++...+...+
T Consensus 278 ~~~~ena~~~A~~L 291 (409)
T KOG0053|consen 278 NKHSENALKIALLL 291 (409)
T ss_pred HHHHHHHHHHHHHh
Confidence 44444443333333
No 265
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.10 E-value=8.4e-09 Score=107.31 Aligned_cols=213 Identities=16% Similarity=0.126 Sum_probs=151.0
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcCC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSRL 280 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 280 (583)
..-...|.++++.+-+. ++.+. ++.|..|+..+ +..+.++||.|++++..|...... ++..|+
T Consensus 62 nPT~~~lE~~~a~LEg~--------~~~~a--fsSGmaAI~~~---~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi 128 (396)
T COG0626 62 NPTRDALEEALAELEGG--------EDAFA--FSSGMAAISTA---LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGV 128 (396)
T ss_pred CccHHHHHHHHHHhhCC--------CcEEE--ecCcHHHHHHH---HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCe
Confidence 34457888888887754 34555 88889999885 445666799999999988876554 456688
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
++..++. . +.+..++++. .++++++++-+|.|||-.+.+ +.+|+++|+++++.+|+|+.|..-.+..
T Consensus 129 ~~~~~d~---~----~~~~~~~~~~--~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~- 195 (396)
T COG0626 129 EVTFVDP---G----DDEALEAAIK--EPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR- 195 (396)
T ss_pred EEEEECC---C----ChHHHHHHhc--ccCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC-
Confidence 8877643 1 3445555552 258999999999999976665 6777888999999999999997655432
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHh-ccccCCChHHHHHHHHHhCC
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIR-GFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~-~~~~~~s~~~q~~~~~~l~~ 439 (583)
++ ..+--|++.|.+|.++-.+-=+|=+++. ++ +.+.+.+....+ .+....++...+.+.+-++.
T Consensus 196 -----PL-----~~GaDIVvhSaTKyl~GHsDvl~G~v~~-~~----~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT 260 (396)
T COG0626 196 -----PL-----ELGADIVVHSATKYLGGHSDVLGGVVLT-PN----EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT 260 (396)
T ss_pred -----hh-----hcCCCEEEEeccccccCCcceeeeEEec-Ch----HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch
Confidence 11 2356799999999997655555544441 43 467777655554 47788899999999988885
Q ss_pred --hhhhhhhhhHHHHHHHHHH
Q psy14428 440 --PKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 440 --~~~~~~~~~~~~~~~~l~~ 458 (583)
-.+++|.++...+.+.+..
T Consensus 261 L~~Rm~~~~~nA~~IA~~L~~ 281 (396)
T COG0626 261 LALRMERHNENALKIAEFLAD 281 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 4567777776666655544
No 266
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.08 E-value=2.9e-08 Score=106.64 Aligned_cols=256 Identities=11% Similarity=0.041 Sum_probs=150.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++......+. .-..+.+..+|+.+.+... -..+++.+ +++|
T Consensus 40 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p--~~~~~v~f--~~sG 111 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHN--HPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALTP--GGLDHVFF--SDSG 111 (423)
T ss_pred CCCEEEEcchhHHhccCCCC--CHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCCc
Confidence 45677899888777666653 467777777766542111100 0012344555555544321 12368999 9999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhhc-C------------CeEEEEecccCCCCCCChhhHHH
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTDS-R------------LNVGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~-G------------~~~~~v~~~d~~~~g~d~~~l~~ 302 (583)
++|.+.+..+.+... ....+|+..+-+|.+........ + ..+..+++.+.+....+++.+++
T Consensus 112 seA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~ 191 (423)
T PRK05964 112 SVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEA 191 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHH
Confidence 999998766655441 22357888888887643322211 1 01223333111000012667777
Q ss_pred HHHcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 303 DIKAMPERSILFLQTS-SHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~-p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
.+.+..++..++++-. .+...|... +.+.+++|.++|++||+++|.||++.+|...+ ....... .+...-+
T Consensus 192 ~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~----~~v~pDi 264 (423)
T PRK05964 192 LLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG---TLFACEQ----AGVSPDI 264 (423)
T ss_pred HHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhHHHh----cCCCCCe
Confidence 7754444444554432 477788665 89999999999999999999999998885543 1111111 1222223
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH------HhccccCCChHHHHHHHHHhC
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL------IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~------~~~~~~~~s~~~q~~~~~~l~ 438 (583)
-++||.++..++++|++++ . +++++.+... .....++.++++..++.+.++
T Consensus 265 ~~~~K~l~gG~~p~~av~~--~-----~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~ 321 (423)
T PRK05964 265 MCLSKGLTGGYLPLAATLC--T-----AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLD 321 (423)
T ss_pred eeeehhhhcCcccceEEEE--c-----HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 4789999844489999888 5 5788877532 111223456777666655554
No 267
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.06 E-value=2.7e-08 Score=106.68 Aligned_cols=206 Identities=16% Similarity=0.119 Sum_probs=132.4
Q ss_pred CCCCCCCChHHHHHHHHHhccCCCCCCCCC---CC--CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHH
Q psy14428 176 EDGKPYVLPSVKEAERRIYEKNLDHEYANI---GG--DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAF 250 (583)
Q Consensus 176 ~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~---~G--~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~ 250 (583)
+.+.+..++.+.+++.+.........|.-. .| +..+++.+|++.+.. ..++ +++++.|+.++
T Consensus 87 Nlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae--------~alv--v~sg~aAi~l~--- 153 (454)
T TIGR00474 87 NLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE--------DALV--VNNNAAAVLLA--- 153 (454)
T ss_pred cCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH---
Confidence 344444668888888777754222223211 11 378889999988642 2345 66677788764
Q ss_pred HHHhCCCCCEEEEcCCCChh------hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC-
Q psy14428 251 LERFYPGVKTVYFPTPTWNG------HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPT- 323 (583)
Q Consensus 251 l~~~~~~gd~Vlv~~P~y~~------~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPT- 323 (583)
+..+ .+||+|++.+-.+.. ....++..|++++.++. +. ..+++++++++ .++++++++.+++||+
T Consensus 154 l~~l-~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~-~~---~~~l~dle~aI---~~~T~lv~~~h~sN~~~ 225 (454)
T TIGR00474 154 LNTL-AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGT-TN---RTHLKDYEDAI---TENTALLLKVHTSNYRI 225 (454)
T ss_pred HHHh-CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCC-CC---CCCHHHHHHhc---CcCCEEEEEEccCcccc
Confidence 3444 459999999865322 23456778999998876 22 23788888877 6789999999999996
Q ss_pred -CC--CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCC---CCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 324 -GV--DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG---DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 324 -G~--~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~---~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
|. ..+ +++|+++|+++|+++|+|...+-+... +. ...+.+....+ .+--+++.|.+|.++-| ..|++
T Consensus 226 ~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl-~~~p~~~~~~~-~GaDiv~fSg~K~LgGp--~~G~i 298 (454)
T TIGR00474 226 VGFTEEVS---IAELVALGREHGLPVMEDLGSGSLVDLSRYGL-PDEPTVQEVIA-AGVDLVTFSGDKLLGGP--QAGII 298 (454)
T ss_pred cCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccccchhccC-CCCcccccHhH-cCCCEEEecCccccCCC--eEEEE
Confidence 52 344 677799999999999999864333110 00 00111222222 23458899999998645 58999
Q ss_pred EEEcCCchhHHHHHHHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~ 416 (583)
++ . +++++++.+
T Consensus 299 ~g--~-----~~~i~~l~~ 310 (454)
T TIGR00474 299 VG--K-----KELIERLKK 310 (454)
T ss_pred EE--C-----HHHHHhhhh
Confidence 98 6 467766553
No 268
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.03 E-value=3.1e-08 Score=104.60 Aligned_cols=200 Identities=17% Similarity=0.079 Sum_probs=140.1
Q ss_pred CChHHHHHHHHHhccCCC----CCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCCchhHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNLD----HEYAN----IGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGISGSGSLRVGTAFLE 252 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~----~~Y~~----~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G~~~al~l~~~~l~ 252 (583)
.|+.+.+++.+...+... ..+.. ..-..+.|+.++++++ .++ ++|++ ++|++.++..+...+.
T Consensus 11 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~~v~~--~~~~t~a~~~~~~~l~ 82 (371)
T PF00266_consen 11 MPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDEEVVF--TSNGTEALNAVASSLL 82 (371)
T ss_dssp -BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTEEEEE--ESSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Ccccccccc--ccccchhhhhhhhccc
Confidence 567788877776543111 11111 1223578888999886 345 78999 9999999998643332
Q ss_pred HhCCCCCEEEEcCCCChhhH----HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 253 RFYPGVKTVYFPTPTWNGHV----RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 253 ~~~~~gd~Vlv~~P~y~~~~----~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
.-.++||+|++.+-.|+... .+.+..|+++..++. +. +..+|++.+++.+ .+++++++++.-+|-||...+
T Consensus 83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~-~~-~~~~~~~~~~~~l---~~~~~lv~~~~~~~~tG~~~p 157 (371)
T PF00266_consen 83 NPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPA-DP-GGSLDLEDLEEAL---NPDTRLVSISHVENSTGVRNP 157 (371)
T ss_dssp HHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEE-GT-TSSCSHHHHHHHH---HTTESEEEEESBETTTTBBSS
T ss_pred cccccccccccccccccccccccccccccchhhhccccc-cc-cchhhhhhhhhhh---ccccceEEeecccccccEEee
Confidence 21456999999988877665 344467999999988 44 3578999999999 578999999999999999988
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
+++|.++|++++++++.|-+.+--..+ +. .+..+--+++.|.-|.+|-+| +|++++ . +
T Consensus 158 ---i~~I~~~~~~~~~~~~vD~~~~~g~~~--------id--~~~~~~D~~~~s~~Kl~gp~G--~g~l~v--~-----~ 215 (371)
T PF00266_consen 158 ---IEEIAKLAHEYGALLVVDAAQSAGCVP--------ID--LDELGADFLVFSSHKLGGPPG--LGFLYV--R-----P 215 (371)
T ss_dssp ---HHHHHHHHHHTTSEEEEE-TTTTTTSS------------TTTTTESEEEEESTSTTSSST--EEEEEE--E-----H
T ss_pred ---eceehhhhhccCCceeEechhcccccc--------cc--ccccccceeeecccccCCCCc--hhhhee--h-----h
Confidence 556688899999999999997643321 10 122233478889999555555 699999 5 5
Q ss_pred HHHHHHHH
Q psy14428 409 RIMSQLKI 416 (583)
Q Consensus 409 ~li~~l~~ 416 (583)
++++++..
T Consensus 216 ~~~~~~~p 223 (371)
T PF00266_consen 216 EAIERLRP 223 (371)
T ss_dssp HHHHHHHT
T ss_pred hhhhcccc
Confidence 67777743
No 269
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.03 E-value=4.4e-10 Score=102.29 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=58.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCC--CCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChh
Q psy14428 201 EYANIGGDAKFCKLAAQLAYGEDF--PAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG 270 (583)
Q Consensus 201 ~Y~~~~G~~~Lr~aia~~~~~~~g--~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~ 270 (583)
.|.+..|.++||+++|+|+.+.+| +.+++++|++ |+|++++++++ +..++++||.|++++|+|+.
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~l---~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEII---MFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHHH---HHHHcCCCCEEEEeCCCCCC
Confidence 399999999999999999999888 7789999999 99999999985 55677889999999999973
No 270
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.02 E-value=1.6e-09 Score=109.49 Aligned_cols=191 Identities=16% Similarity=0.079 Sum_probs=129.8
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEE
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYF 263 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv 263 (583)
+.+.+++.+.... ...|....-..+|.+.+++.++. +..++ +++|+.|-.++ ++.++.|++.|++
T Consensus 9 ~~m~~a~~~a~~g--d~~Yg~D~~~~~l~~~i~~l~g~--------e~a~f--~~sGT~An~~a---l~~~~~~~~~vi~ 73 (290)
T PF01212_consen 9 PAMLEAMAAANVG--DDAYGEDPTTARLEERIAELFGK--------EAALF--VPSGTMANQLA---LRAHLRPGESVIC 73 (290)
T ss_dssp HHEEHHHHHTTSB---CCTTSSHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHH---HHHHHHTTEEEEE
T ss_pred HHHHHHHHccccC--CcccCCChhHHHHHHHHHHHcCC--------CEEEE--eCCCChHHHHH---HHHHHhcCCceec
Confidence 5666666444332 22688888889999999999875 34456 78899898885 4445567999999
Q ss_pred cCCCChh---hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q psy14428 264 PTPTWNG---HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPT-GVDLSEDQWRQLA 336 (583)
Q Consensus 264 ~~P~y~~---~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPT-G~~~s~~~~~~l~ 336 (583)
..++... ........|+++++++. + ++..++++.+++.++.. ..+++++.+.+|+|-. |.++|.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~-~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPS-D-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBE-C-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCC-c-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 9997432 22333558999999987 2 22678999999999763 3578999999999986 7899999999999
Q ss_pred HHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
++|+++|+.+..|-+-..-.-. ....+++.+.. . --++.-|+||..++++ |.+++
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~~---~~~~~~~e~~~-~-~D~v~~~~tK~~g~~~---Gavl~ 206 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAAA---ALGVSLAEIAA-G-ADSVSFGGTKNGGAPG---GAVLA 206 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHHC---HHHHHHHHHHT-T-SSEEEEETTSTT-SSS---EEEEE
T ss_pred HHHHhCceEEEEehhhHHHhhh---cccccHHHHhh-h-CCEEEEEEEccccccc---ceEEE
Confidence 9999999999999983211100 01123444332 2 2244557999987666 76666
No 271
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.97 E-value=4.5e-08 Score=98.44 Aligned_cols=268 Identities=12% Similarity=-0.004 Sum_probs=161.0
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
+-+.+.+++.+... ...+..|..+.-+++.+++.+..+. +.+++ +++||++-.++ ++..+.||+.|
T Consensus 12 ~~~~m~eam~~a~~-----~~~~~YG~D~~~~~~e~~~ae~~g~----~a~~F--v~sGT~aN~la---l~~~~~~~~~v 77 (342)
T COG2008 12 PTPEMREALAAANA-----VGDDVYGEDPTTNALEQRIAELFGK----EAALF--VPSGTQANQLA---LAAHCQPGESV 77 (342)
T ss_pred CCHHHHHHHHhccc-----cCCCCCCCCHHHHHHHHHHHHHhCC----ceEEE--ecCccHHHHHH---HHHhcCCCCeE
Confidence 45778888766542 2233445555566665555554332 67888 88999999884 56677889999
Q ss_pred EEcCCCChhhHH--HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q psy14428 262 YFPTPTWNGHVR--FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLA 336 (583)
Q Consensus 262 lv~~P~y~~~~~--~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~ 336 (583)
++..-+...... ..+..+ .+.+++..+..+..++++.++..+... ..++.++++-|.+|--|+++|.+++++|.
T Consensus 78 i~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~ 156 (342)
T COG2008 78 ICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAIS 156 (342)
T ss_pred EEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHH
Confidence 988766332211 122222 122333323345789999999988642 23444555555555779999999999999
Q ss_pred HHHHhcCeEEEEeccCC--CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 337 VVVKQRHLYPFFDMAYL--GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y~--~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
++|+++++.|-.|-+-. -+...+ ++...+.. +-.++ .-++||..+.|+ |.+++ -| .++++++
T Consensus 157 ~~~k~~~l~LHmDGAR~~nA~valg-----~~~~~~~~-~~D~v-~~~~tK~g~~~~---gAiv~--gn----~~~~~~a 220 (342)
T COG2008 157 AVCKEHGLPLHMDGARLANALVALG-----VALKTIKS-YVDSV-SFCLTKGGGAPV---GAIVF--GN----RDFAKRA 220 (342)
T ss_pred HHHHHhCCceeechHHHHHHHHHcC-----CCHHHHHh-hCCEE-EEecccCCccee---eeEEE--cC----HHHHHHH
Confidence 99999999999998731 222222 12333322 22233 445799887655 88888 55 4788888
Q ss_pred HHHHhccccCC--ChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh--hccC-CCccchhhHHHHhcC
Q psy14428 415 KILIRGFYSNP--PIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR--GFYS-NPPIHGARIVTEILS 480 (583)
Q Consensus 415 ~~~~~~~~~~~--s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r--~~~~-~~p~~g~~i~~~~l~ 480 (583)
...+.+..... +.+.......+|+++-+...-.........+.+.++ .+++ .+|...+.+++.+.+
T Consensus 221 ~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~ 291 (342)
T COG2008 221 RRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE 291 (342)
T ss_pred HHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh
Confidence 87765554333 344444455567766443333333333334444444 2344 455677766665544
No 272
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.94 E-value=1.2e-07 Score=100.66 Aligned_cols=217 Identities=13% Similarity=0.037 Sum_probs=133.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.. ...+ .....++...+|+.+.+.. ..+++++ +++|
T Consensus 34 dG~~~lD~~sg~~~~~lGh~--~p~v~~a~~~q~~~~-~~~~--~~~~~~~~~~la~~l~~~~----~~~~v~f--~~SG 102 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHC--NPGMVEALAAQAEKL-INPS--PAFYNEPMAKLAGLLTQHS----CFDKVFF--ANSG 102 (395)
T ss_pred CCCEEEECCcChhhccCCCC--CHHHHHHHHHHHHhc-cccc--ccccCHHHHHHHHHHhhcc----CCCEEEE--eCCc
Confidence 35677899887776666654 367777777666431 1111 1233567788888887542 2368999 9999
Q ss_pred hhHHHHHHHHHHHhC---CCC-CEEEEcCCCChhhHH-HHhhcCCeEEE---EecccC-C-CCCCChhhHHHHHHcCCCC
Q psy14428 241 SGSLRVGTAFLERFY---PGV-KTVYFPTPTWNGHVR-FCTDSRLNVGA---YRYFDN-K-TNGLDFAGMMEDIKAMPER 310 (583)
Q Consensus 241 ~~al~l~~~~l~~~~---~~g-d~Vlv~~P~y~~~~~-~~~~~G~~~~~---v~~~d~-~-~~g~d~~~l~~~l~~~~~~ 310 (583)
++|.+.+..+.+... .+| +.|+..+.+|..... .+...|..... .|.... . ..--|++.+++.+ .++
T Consensus 103 seA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l---~~~ 179 (395)
T PRK03715 103 AEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLI---TDK 179 (395)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHc---CCC
Confidence 999998766655431 112 578888888876543 22323322111 111000 0 0012567777766 345
Q ss_pred cEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccc
Q psy14428 311 SILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGL 389 (583)
Q Consensus 311 ~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l 389 (583)
+.++++...++..|.. .+++.+++|.++|+++|+++|.||++..|...+ .......+ +-... +.+|||.++
T Consensus 180 ~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG---~~~a~~~~-gv~PD---i~t~gK~lg- 251 (395)
T PRK03715 180 TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG---TLFAYELS-GIEPD---IMTLGKGIG- 251 (395)
T ss_pred ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc---chhhHhhc-CCCCc---eeeehhhhh-
Confidence 5566555444444544 378999999999999999999999999874433 11111221 11122 457899998
Q ss_pred cCccceEEEE
Q psy14428 390 YGERVGTFSV 399 (583)
Q Consensus 390 ~GlRiG~lv~ 399 (583)
.|+-+|.+++
T Consensus 252 ~G~p~~av~~ 261 (395)
T PRK03715 252 GGVPLAALLA 261 (395)
T ss_pred CCcceEEEEE
Confidence 7899999988
No 273
>PRK06541 hypothetical protein; Provisional
Probab=98.94 E-value=3.3e-07 Score=99.24 Aligned_cols=254 Identities=12% Similarity=0.045 Sum_probs=144.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+.... .+.......+.+..+|+.+.+... -..+++.. +++|
T Consensus 50 dG~~ylD~~~g~~~~~lGh~--~p~v~~Av~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f--~~sG 121 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHG--RAELAEAAAKQAGTLA--FFPLWSYAHPPAIELAERLAALAP--GDLNRVFF--TTGG 121 (460)
T ss_pred CCCEEEECCccHHhccCCCC--CHHHHHHHHHHHhhCc--CccccccCCHHHHHHHHHHHHhCC--CCcCEEEE--cCCc
Confidence 45667898888776666653 4677777777665411 011111112333445555443211 12368999 9999
Q ss_pred hhHHHHHHHHHHHh---C--CCCCEEEEcCCCChhhHHHHhh-cC------------CeEEEEecccCCC---CCCC---
Q psy14428 241 SGSLRVGTAFLERF---Y--PGVKTVYFPTPTWNGHVRFCTD-SR------------LNVGAYRYFDNKT---NGLD--- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~---~--~~gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~d~~~---~g~d--- 296 (583)
++|.+.+..+.+.. . +...+|+...-+|.+....... .| ..+..+|..+... ++-+
T Consensus 122 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 201 (460)
T PRK06541 122 SEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEA 201 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHH
Confidence 99999876655543 1 1135777777776655322111 11 0122233211000 1112
Q ss_pred -----hhhHHHHHHcCCCCcEEEEeCCC-CCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 297 -----FAGMMEDIKAMPERSILFLQTSS-HNPTGVDLS-EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 297 -----~~~l~~~l~~~~~~~~~i~i~~p-~NPTG~~~s-~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
++.+++.+.+..++..+.++..| +++.|.+.. .+-+++|.++|+++|+++|.||++..|.--+ .......
T Consensus 202 ~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G---~~~a~~~ 278 (460)
T PRK06541 202 FGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLG---EMFGCER 278 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hhhhhhh
Confidence 24566666433234455555566 999998765 8889999999999999999999998874222 1111111
Q ss_pred HHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHHh----ccccCCChHHHHHHHHHh
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILIR----GFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~~----~~~~~~s~~~q~~~~~~l 437 (583)
+ +-.+.++ +|||.++ .|+ ++|++++ + +++++.+..... ...++.++++..++.+.+
T Consensus 279 ~-gv~PDiv---t~gK~l~-~G~~pigav~~--~-----~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l 339 (460)
T PRK06541 279 F-GYVPDII---TCAKGIT-SGYSPLGAMIA--S-----DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANL 339 (460)
T ss_pred c-CCCCCEE---Eeccccc-CCccceeEEEE--c-----HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHH
Confidence 1 1122333 5899998 897 9999999 6 577777754221 123344556655554443
No 274
>PRK02769 histidine decarboxylase; Provisional
Probab=98.94 E-value=1.7e-07 Score=98.75 Aligned_cols=232 Identities=13% Similarity=0.095 Sum_probs=148.4
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCe--EEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRL--AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAY 285 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I--~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 285 (583)
..++.+.+.+++.+..|. +++++ .+ |+||+++...+....+.+.+ +++|++++-........++..|.+...|
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~--TsGgTean~~a~~~ar~~~~-~~~ii~s~~~H~Sv~ka~~~lg~~~~~V 137 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYI--TNGGTEGNLYGCYLARELFP-DGTLYYSKDTHYSVSKIARLLRIKSRVI 137 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEE--ecChHHHHHHHHHHHHHhCC-CcEEEeCCCceehHHHHHHHcCCCCcee
Confidence 344544444444443333 34444 77 99999997654222233334 7899999888888888889999998889
Q ss_pred ecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC---eEEEEeccCCCCCCCCCCC
Q psy14428 286 RYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRH---LYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 286 ~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~---i~iI~De~Y~~l~~~~~~~ 362 (583)
+. ++ ++.+|++.+++.+.....++.+++++..+|+||.+-+.++ |.++|++++ +++.+|-+++.+...-. .
T Consensus 138 ~~-~~-~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~---I~~i~~~~g~~~~~lHVDaA~gg~~~p~~-~ 211 (380)
T PRK02769 138 TS-LP-NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKE---IQEILKKIGIDDYYIHADAALSGMILPFV-N 211 (380)
T ss_pred cc-CC-CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHH---HHHHHHHhCCCceEEEEEecccceeeccc-C
Confidence 88 54 4679999999999765556889999999999999988554 567788887 79999999987654311 0
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHh---ccc-------cCCChHHHHH
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIR---GFY-------SNPPIHGARI 432 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~---~~~-------~~~s~~~q~~ 432 (583)
..+.+ .+ .. +--.+..|.-|.++ .-.-+|.++. .+ +.++.+..... ... .+.+.+..++
T Consensus 212 ~~~~~-d~-~~-~vDsis~s~HK~~~-~P~g~G~l~~--r~-----~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~ 280 (380)
T PRK02769 212 NPPPF-SF-AD-GIDSIAISGHKFIG-SPMPCGIVLA--KK-----KYVERISVDVDYIGSRDQTISGSRNGHTALLLWA 280 (380)
T ss_pred ccccC-Cc-cC-CCCEEEECCcccCC-CCCCcEEEEE--eh-----hhhhhcccCccccCCCCCCccCCCCcHHHHHHHH
Confidence 10011 11 11 22345677889776 3456899988 52 34444421111 000 1223566667
Q ss_pred HHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 433 VTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 433 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
+...+....+++..++..+..+.+.+.++
T Consensus 281 aL~~lg~~G~~~~~~~~~~la~~l~~~L~ 309 (380)
T PRK02769 281 AIRSLGSKGLRQRVQHCLDMAQYAVDRLQ 309 (380)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776777666666555555544443
No 275
>KOG1549|consensus
Probab=98.94 E-value=4.2e-08 Score=101.18 Aligned_cols=188 Identities=13% Similarity=0.040 Sum_probs=135.0
Q ss_pred CChHHHHHHHHHhcc----CCC--CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC
Q psy14428 182 VLPSVKEAERRIYEK----NLD--HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~----~~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~ 255 (583)
.++.|.+++...... +.. ..+....+.+.-|+.+|++++ .++.+|++ |+|+|+++.++..-. -.
T Consensus 55 ~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~dIiF--ts~ATEs~Nlvl~~v--~~ 124 (428)
T KOG1549|consen 55 MDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPSDIVF--TSGATESNNLVLKGV--AR 124 (428)
T ss_pred CCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCCcEEE--eCCchHHHHHHHHHh--hc
Confidence 446777776655543 211 122334457889999999987 45677999 999999999963322 22
Q ss_pred CCCC----EEEEcCCCChhh---HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 256 PGVK----TVYFPTPTWNGH---VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 256 ~~gd----~Vlv~~P~y~~~---~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
..+| .|++..-.|+.. ....+..|++++.+|+ + ++.-+|.+.+++.+ .++++++.+-.-+|=+|++++
T Consensus 125 ~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv-~-~~~~~d~~~~~~~i---~~~T~lv~I~~Vnn~~gv~~P 199 (428)
T KOG1549|consen 125 FFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPV-E-DSGLVDISKLREAI---RSKTRLVSIMHVNNEIGVLQP 199 (428)
T ss_pred cccccccceEEEecccCcchhHHHHHHHhcCeEEEEecc-C-ccccccHHHHHHhc---CCCceEEEEEecccCcccccc
Confidence 2355 777766555554 4556677999999999 4 44667899998888 789999999999999999998
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+++|.++|+++++.++.|-+.+-=. -+.-++. -+--++.-|.-|.||.|| +|++.+
T Consensus 200 ---v~EI~~icr~~~v~v~~DaAQavG~------i~vDV~e----ln~D~~s~s~HK~ygp~~--iGaLYv 255 (428)
T KOG1549|consen 200 ---VKEIVKICREEGVQVHVDAAQAVGK------IPVDVQE----LNADFLSISAHKIYGPPG--IGALYV 255 (428)
T ss_pred ---HHHHHHHhCcCCcEEEeehhhhcCC------ccccHHH----cCchheeeecccccCCCc--ceEEEE
Confidence 5566889999999999999863211 1112222 233456677889999999 999999
No 276
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=98.93 E-value=1.6e-07 Score=100.42 Aligned_cols=146 Identities=12% Similarity=0.079 Sum_probs=104.4
Q ss_pred CCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC---CEEEEcCCCChhhHH----HHhhcCCeE----EEEecccCCCCC
Q psy14428 226 AFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV---KTVYFPTPTWNGHVR----FCTDSRLNV----GAYRYFDNKTNG 294 (583)
Q Consensus 226 ~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g---d~Vlv~~P~y~~~~~----~~~~~G~~~----~~v~~~d~~~~g 294 (583)
..++++|++ |+|+++++.++. ..+..++ +.|++.+..|+.-.. .++..|+++ +.++. + +++.
T Consensus 83 g~~~~~v~~--~~~~t~~l~~~~---~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~g~ 155 (406)
T TIGR01814 83 GAKEDEVVV--MNTLTINLHLLL---ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP-R-EEET 155 (406)
T ss_pred CCCCCcEEE--eCCchHHHHHHH---HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc-C-CCCc
Confidence 357899999 999999999853 3333333 368888888887332 345668887 45554 2 2356
Q ss_pred CChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhc
Q psy14428 295 LDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEV 374 (583)
Q Consensus 295 ~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~ 374 (583)
++++.+++.++...+++++++++.++|.||..++ +++|.++|+++|+++++|++..--..+ ..+ +..
T Consensus 156 ~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~~------id~----~~~ 222 (406)
T TIGR01814 156 LRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNVP------LDL----HDW 222 (406)
T ss_pred cCHHHHHHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCCcc------ccc----ccC
Confidence 7888888888655678999999999999999997 666688899999999999997542211 011 123
Q ss_pred CcEEEEecCcccc-cccC
Q psy14428 375 GQLCLAQSFSKNM-GLYG 391 (583)
Q Consensus 375 ~~vi~i~S~SK~~-~l~G 391 (583)
+--+++.|..|.+ |-||
T Consensus 223 gvD~~~~s~hK~l~g~pG 240 (406)
T TIGR01814 223 GVDFACWCTYKYLNAGPG 240 (406)
T ss_pred CCCEEEEcCccccCCCCC
Confidence 4568889999976 3356
No 277
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.88 E-value=1.5e-08 Score=106.38 Aligned_cols=176 Identities=14% Similarity=0.037 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecc
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 288 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 288 (583)
.+-.+.+|+.++.. .-.++ |+|++.++..+ +..++.+||.|+++.-+.-.....+...|+++++++..
T Consensus 69 ~eAe~~aA~~fGAd-------~t~fl--vnGsT~g~~a~---i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~ 136 (417)
T PF01276_consen 69 KEAEELAARAFGAD-------KTFFL--VNGSTSGNQAM---IMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE 136 (417)
T ss_dssp HHHHHHHHHHHTES-------EEEEE--SSHHHHHHHHH---HHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHhcCCC-------eEEEE--ecCchHHHHHH---HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC
Confidence 55556666666542 35667 99999999884 45567779999999999998888999999999998774
Q ss_pred cCCC---CCCCh-----hhHHHHHHcCCCCc--EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC-CCC
Q psy14428 289 DNKT---NGLDF-----AGMMEDIKAMPERS--ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG-LTS 357 (583)
Q Consensus 289 d~~~---~g~d~-----~~l~~~l~~~~~~~--~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~-l~~ 357 (583)
+++. .++++ +.+++++++.+... +++++.+|.- -|.+.+ +++|+++|.++++.|++||||+. |.|
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F 212 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGF 212 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGC
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccC
Confidence 3321 23556 88888888764332 2355555433 388886 56668889999999999999864 334
Q ss_pred CCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 358 GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
.+...+...+..-......++++.|.-|++ |++.=+.++-+..
T Consensus 213 ~~lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~ 255 (417)
T PF01276_consen 213 HPLPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKG 255 (417)
T ss_dssp SGGGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEET
T ss_pred CCCccchhhccCccccccceeeeechhhcc--cccccceEEEecC
Confidence 321111101100011234689999999997 6777775554333
No 278
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=98.87 E-value=2.7e-07 Score=94.86 Aligned_cols=191 Identities=18% Similarity=0.132 Sum_probs=132.3
Q ss_pred CCChHHHHHHHHHhccC-----CCCCCC--CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH
Q psy14428 181 YVLPSVKEAERRIYEKN-----LDHEYA--NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER 253 (583)
Q Consensus 181 ~~~~~v~~a~~~~~~~~-----~~~~Y~--~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~ 253 (583)
++.+.+.+++...+... ..+.|+ ......+-|+.||+.++ +++++|++ |+|++++..++..-...
T Consensus 12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llg------a~~~eIiF--TSG~TEsnNlaI~g~~~ 83 (386)
T COG1104 12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLG------ADPEEIIF--TSGATESNNLAIKGAAL 83 (386)
T ss_pred CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhC------CCCCeEEE--ecCCcHHHHHHHHhhHH
Confidence 35677777776666431 122232 12335778888888886 56799999 99999999986322111
Q ss_pred hC---CCCCEEEEcCCCChhhHHHHhhc---CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCC
Q psy14428 254 FY---PGVKTVYFPTPTWNGHVRFCTDS---RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327 (583)
Q Consensus 254 ~~---~~gd~Vlv~~P~y~~~~~~~~~~---G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~ 327 (583)
.. +.|..|++..-..+...+.++.. |.+|.++|+ |. ++-+|++.++++| ++++.++-+-.-||=||++.
T Consensus 84 a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V-~~-~G~v~~e~L~~al---~~~T~LVSim~aNnE~G~IQ 158 (386)
T COG1104 84 AYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPV-DS-NGLVDLEQLEEAL---RPDTILVSIMHANNETGTIQ 158 (386)
T ss_pred hhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCC-CC-CCeEcHHHHHHhc---CCCceEEEEEecccCeeecc
Confidence 11 24778888877777777766665 999999999 55 4678999999998 68899999999999999988
Q ss_pred CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 328 s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+. ++|.++|+++++++.+|-+-.- +. -+..+ +..+--+..-|--|..|.-| +|.++.
T Consensus 159 pI---~ei~~i~k~~~i~fHvDAvQa~---Gk---ipi~~----~~~~vD~ls~SaHK~~GpkG--iGaLyv 215 (386)
T COG1104 159 PI---AEIGEICKERGILFHVDAVQAV---GK---IPIDL----EELGVDLLSFSAHKFGGPKG--IGALYV 215 (386)
T ss_pred cH---HHHHHHHHHcCCeEEEehhhhc---Cc---eeccc----cccCcceEEeehhhccCCCc--eEEEEE
Confidence 85 5558889999999999987421 11 00011 11111233345569888777 588887
No 279
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.86 E-value=3.4e-07 Score=91.85 Aligned_cols=217 Identities=15% Similarity=0.109 Sum_probs=151.8
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh----HHHHhhcCCe
Q psy14428 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH----VRFCTDSRLN 281 (583)
Q Consensus 206 ~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~----~~~~~~~G~~ 281 (583)
+-...|.+.||..-+....+. ++.|+.|+.++ +..+..+||.|+-.+--|.+. ...++..|++
T Consensus 62 PT~~vlE~RiAaLEGG~aa~a----------~aSG~AA~~~a---i~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~ 128 (426)
T COG2873 62 PTTDVLEERIAALEGGVAALA----------VASGQAAITYA---ILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIE 128 (426)
T ss_pred chHHHHHHHHHHhhcchhhhh----------hccchHHHHHH---HHHhccCCCeeEeeccccCchHHHHHHHHHhcCcE
Confidence 345778888888776543332 77788888875 344566699998887766655 4456778999
Q ss_pred EEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCC
Q psy14428 282 VGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFD 361 (583)
Q Consensus 282 ~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~ 361 (583)
+..++- + |++.+++++ .+++|++++-+-.||-+.+.+ +++|.++|+++++++|+|..+..-.
T Consensus 129 v~fvd~---~----d~~~~~~aI---~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpy----- 190 (426)
T COG2873 129 VRFVDP---D----DPENFEAAI---DENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPY----- 190 (426)
T ss_pred EEEeCC---C----CHHHHHHHh---CcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcce-----
Confidence 988843 2 788999988 789999999999999999887 5667888999999999999875422
Q ss_pred CchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhH-----H---------------------HH-HHHH
Q psy14428 362 KDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDET-----E---------------------RI-MSQL 414 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~-----~---------------------~l-i~~l 414 (583)
-++.+ +.+--|++.|.||.+|-.|--+|=+++-+.+-++. + .+ ++.-
T Consensus 191 ----l~rP~--~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r 264 (426)
T COG2873 191 ----LCRPI--EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKAR 264 (426)
T ss_pred ----ecchh--hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHH
Confidence 12221 24567899999999998999999887732211100 0 01 1111
Q ss_pred HHHHhccccCCChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHHHH
Q psy14428 415 KILIRGFYSNPPIHGARIVTEILSD--PKLKAQCDETERIMSQLKIL 459 (583)
Q Consensus 415 ~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~ 459 (583)
....+....+.+++..+.+.+-++. -.+++|.++..++.+.+.+-
T Consensus 265 ~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~H 311 (426)
T COG2873 265 VQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENH 311 (426)
T ss_pred HHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcC
Confidence 1223455566677777777777764 46788888888777766543
No 280
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=98.85 E-value=2.5e-07 Score=99.12 Aligned_cols=215 Identities=15% Similarity=0.032 Sum_probs=122.7
Q ss_pred hhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHh-cc-CCCCCCCC----CCCCHHHHH----HHHH
Q psy14428 148 KPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIY-EK-NLDHEYAN----IGGDAKFCK----LAAQ 217 (583)
Q Consensus 148 ~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~-~~-~~~~~Y~~----~~G~~~Lr~----aia~ 217 (583)
..++.++..-. ......++|-..+.. ..|.+++++.... .. +....+.. ..-..+|.+ .+++
T Consensus 14 ~~~~~~~~~~~-~~~~~~~~l~~sen~-------~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~ 85 (416)
T PRK13034 14 DEVFAAINKEL-ERQQDHLELIASENF-------TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQ 85 (416)
T ss_pred HHHHHHHHHHH-HHHhcCeeecccccC-------CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHH
Confidence 34555544211 123455666544432 4578888877664 22 11111111 233566666 7777
Q ss_pred HHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh-HHHHhh--cCCeE--EEEecccCCC
Q psy14428 218 LAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH-VRFCTD--SRLNV--GAYRYFDNKT 292 (583)
Q Consensus 218 ~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~-~~~~~~--~G~~~--~~v~~~d~~~ 292 (583)
+++.+ ..++ .+++|+.|+..+ +..++++||+|+++..+|... ..-++. .+... +.++. +..+
T Consensus 86 l~g~~--------~alv-~~~SG~~A~~~~---l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 152 (416)
T PRK13034 86 LFGCD--------YANV-QPHSGSQANGAV---YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGV-DRLT 152 (416)
T ss_pred HhCCC--------ceEE-ecCCcHHHHHHH---HHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccc-cccc
Confidence 77542 3322 156778888874 445677899999999988652 111111 12111 34444 3445
Q ss_pred CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH
Q psy14428 293 NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK 372 (583)
Q Consensus 293 ~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~ 372 (583)
..+|++.+++.++. .+++++++..+.+ |... ++.+|.++|+++|+++|+|++..--.+... ....+
T Consensus 153 ~~~d~~~le~~l~~--~~~klVi~~~~~~--g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~g-~~~~~------ 218 (416)
T PRK13034 153 GLIDYDEVEELAKE--HKPKLIIAGFSAY--PREL---DFARFREIADEVGALLMVDMAHIAGLVAAG-EHPNP------ 218 (416)
T ss_pred CCcCHHHHHHHHhh--cCCeEEEECCCcc--cccc---CHHHHHHHHHHcCCEEEEeCcccccCcccC-CCCCC------
Confidence 66899999888753 2467777766554 4444 456667789999999999999654332210 00001
Q ss_pred hcCcEEEEecCcccccccCccceEEEE
Q psy14428 373 EVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 373 ~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
...--+++.|++|.++.+ .-|++++
T Consensus 219 ~~~~Di~~~s~~K~l~g~--~GG~v~~ 243 (416)
T PRK13034 219 FPHAHVVTTTTHKTLRGP--RGGMILT 243 (416)
T ss_pred CCCceEEEEeCcccCCCC--CCeEEEE
Confidence 112358899999998423 2477776
No 281
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.82 E-value=2.5e-06 Score=88.43 Aligned_cols=227 Identities=15% Similarity=0.119 Sum_probs=144.2
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChh--hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
.++++ +.+|+.+++. .+..+.+|||+|++..-+... +..+++.+|++++.+.. + ....++++++++.|++ .
T Consensus 57 ~~~ll-~gsGt~amEA---av~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~-~-wg~~v~p~~v~~~L~~-~ 129 (383)
T COG0075 57 DVVLL-SGSGTLAMEA---AVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV-E-WGEAVDPEEVEEALDK-D 129 (383)
T ss_pred cEEEE-cCCcHHHHHH---HHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC-C-CCCCCCHHHHHHHHhc-C
Confidence 44442 5667778887 456677789999998877433 47789999999999987 3 3467899999999974 4
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 309 ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
+..+++.+++.--+||+..+ +++|.++|++|+.++|+|-+=+ +++. .+. .+..+--+++.+--|.++
T Consensus 130 ~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVsS---~Gg~-----~~~--vd~wgiDv~itgSQK~l~ 196 (383)
T COG0075 130 PDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVSS---LGGE-----PLK--VDEWGIDVAITGSQKALG 196 (383)
T ss_pred CCccEEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEeccc---CCCc-----ccc--hhhcCccEEEecCchhcc
Confidence 56677878888889998875 6677888999999999999853 2221 111 244455677888889986
Q ss_pred c-cCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCC
Q psy14428 389 L-YGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNP 467 (583)
Q Consensus 389 l-~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~ 467 (583)
. ||+ |.+.+ + ++..+++.......+ . + .++...+..++. ......|
T Consensus 197 ~PPGl--a~v~~--S-----~~a~e~~~~~~~~~~----y---------l----------DL~~~~~~~~~~-~~~p~Tp 243 (383)
T COG0075 197 APPGL--AFVAV--S-----ERALEAIEERKHPSF----Y---------L----------DLKKWLKYMEKK-GSTPYTP 243 (383)
T ss_pred CCCcc--ceeEE--C-----HHHHHHHhcCCCCce----e---------e----------cHHHHHHHHhhc-CCCCCCC
Confidence 5 674 77777 5 456666664432200 0 0 011111111110 1122355
Q ss_pred ccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14428 468 PIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGS 515 (583)
Q Consensus 468 p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~ 515 (583)
|.+..|-+-..+. ..-.+-++...+|.+...+.+.+.++.+|.
T Consensus 244 pv~~i~aL~~al~-----~i~~EGle~r~~RH~~~~~a~r~~~~alGl 286 (383)
T COG0075 244 PVNLIYALREALD-----LILEEGLEARIARHRRLAEALRAGLEALGL 286 (383)
T ss_pred CHHHHHHHHHHHH-----HHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6555544443332 122233455566777888888888888763
No 282
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.81 E-value=2.7e-08 Score=99.29 Aligned_cols=194 Identities=13% Similarity=0.043 Sum_probs=115.6
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh--CC-CCCEEEEcCCCChhhHHHHhhcCCeEEE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF--YP-GVKTVYFPTPTWNGHVRFCTDSRLNVGA 284 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~--~~-~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 284 (583)
.++|.+.|.+....-.+...+-..|++ .+|++|.+..+.-.|... .. +--.|+...|.|+.|...-....-....
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~--GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~ 122 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVF--GTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYK 122 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEE--ECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEE--cCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcc
Confidence 378888888877665444455557888 899999888753333222 11 1137999999999999876554433322
Q ss_pred EecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCch
Q psy14428 285 YRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDA 364 (583)
Q Consensus 285 v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~ 364 (583)
..= |...+ . .......-+=++++||||.|.. ++.++ +.-+..+|-|-+|.-=.|..
T Consensus 123 w~G-da~~~----~------~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp----- 178 (363)
T PF04864_consen 123 WAG-DASNF----K------NSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP----- 178 (363)
T ss_dssp EEE-ECCCG----T------T-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS------
T ss_pred ccc-cHHhh----c------cCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc-----
Confidence 222 22211 1 1113456777889999999964 23333 45566789999996555542
Q ss_pred HHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 365 FSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 365 ~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+.+ ..+.-|-+.|+||.=|=+|-|+||+++ .| +++.++|.+.......++|.=+|.=++.+|+
T Consensus 179 --I~~---~aD~DiMLFT~SK~TGHAGSR~GWAlV--KD----~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk 241 (363)
T PF04864_consen 179 --ITA---PADHDIMLFTLSKLTGHAGSRFGWALV--KD----EEVAKKMTKYMELNTIGVSRDSQLRALKILK 241 (363)
T ss_dssp ----S----B--SEEEEEHHHHCS-GGG-EEEEEE--S-----HHHHHHHHHHHHHHCSS--HHHHHHHHHHHH
T ss_pred --cCC---CCCCceEEEEEecccCccccccceeee--cC----HHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 222 234568899999999999999999999 76 6899999999888889999888887766654
No 283
>PLN03032 serine decarboxylase; Provisional
Probab=98.81 E-value=2.4e-07 Score=97.06 Aligned_cols=233 Identities=11% Similarity=0.027 Sum_probs=144.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCe--EEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRL--AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGA 284 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I--~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 284 (583)
...++.+.+.+++.+..| .+++++ ++ |+|||+|..++....+...+ +..|+++.-........++..|.++..
T Consensus 63 ~a~~~e~~v~~~ia~llg--~~~~~~~G~f--TsGGTEaNl~al~~ar~~~~-~~~vi~s~~~H~Sv~kaa~~lg~~~~~ 137 (374)
T PLN03032 63 HSRQFEVGVLDWFARLWE--LEKDEYWGYI--TTCGTEGNLHGILVGREVFP-DGILYASRESHYSVFKAARMYRMEAVK 137 (374)
T ss_pred cHHHHHHHHHHHHHHHhC--CCCccCCEEE--eCchHHHHHHHHHHHHHhCC-CcEEEeCCCceeHHHHHHHHcCCCCeE
Confidence 345666666666655444 356666 88 99999999776333232233 457777777777777888889999989
Q ss_pred EecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-----eEEEEeccCCCCCCCC
Q psy14428 285 YRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRH-----LYPFFDMAYLGLTSGD 359 (583)
Q Consensus 285 v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~-----i~iI~De~Y~~l~~~~ 359 (583)
||+ |+ ++.+|++.+++.+++...++.+++++-.+|+||.+-+ +++|.++|++++ +++.+|-+++.....-
T Consensus 138 V~~-d~-~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~ 212 (374)
T PLN03032 138 VPT-LP-SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPF 212 (374)
T ss_pred eee-CC-CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhc
Confidence 998 55 4689999999999754446778888889999999866 556677788885 5899999987643210
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhcc-----cc-----CCChHH
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGF-----YS-----NPPIHG 429 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~-----~~-----~~s~~~ 429 (583)
. ...+.+ .+. . +---..-|..|..+ .-.-+|.++. .+ ..++.+....... .. +.+.+.
T Consensus 213 ~-~~~~~~-~~~-~-~vDSis~s~HK~~g-~P~g~G~ll~--r~-----~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~ 280 (374)
T PLN03032 213 V-SRAPEV-TFR-K-PIGSVSVSGHKFLG-CPMPCGVALT--RK-----KHVKALSQNVEYLNSRDATIMGSRNGHAPLY 280 (374)
T ss_pred c-CCCccc-CCC-c-CCcEEEECcccccC-CCcCeEEEEE--Ec-----hhhHhhccCCcccCCCCCcccCCCchHHHHH
Confidence 0 000000 111 1 11235567889776 4455788888 52 3444443211111 01 123455
Q ss_pred HHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 430 ARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 430 q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
.++....+..+.+.+..++..+....+.+.++
T Consensus 281 ~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~ 312 (374)
T PLN03032 281 LWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLT 312 (374)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666666666555555444444443
No 284
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.79 E-value=1e-06 Score=95.00 Aligned_cols=254 Identities=13% Similarity=0.050 Sum_probs=142.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+.... + +....-..+....+|+.+...... -..+++.+ +++|
T Consensus 52 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~-~-~~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f--~~SG 124 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHA--HPKVVKAVKEQAEKFL-H-YSLTDFYYEPAVELAERLVEIAPG-GFEKKVFF--TNSG 124 (441)
T ss_pred CCCEEEECCCchhhcccCCC--CHHHHHHHHHHHHhcc-C-ccCcccCCHHHHHHHHHHHHhCCC-CCCCEEEE--CCch
Confidence 45567898888776666653 3677777776665421 1 111000123445556655432210 01268999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cCC-------------eEEEEecccCCC--CC-CC-------
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SRL-------------NVGAYRYFDNKT--NG-LD------- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~-------------~~~~v~~~d~~~--~g-~d------- 296 (583)
++|.+.+..+.+.... .++|+...-+|.+....... .|. .+..+|..+... ++ -+
T Consensus 125 sEA~e~AlklAr~~tg-r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (441)
T PRK05769 125 TESNEAAIKIARYHTG-RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNA 203 (441)
T ss_pred HHHHHHHHHHHHHHhC-CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHH
Confidence 9999988766665543 46788877777765432221 111 123333311000 00 01
Q ss_pred -hhhHHHHH-Hc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH
Q psy14428 297 -FAGMMEDI-KA--MPERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA 371 (583)
Q Consensus 297 -~~~l~~~l-~~--~~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~ 371 (583)
++.+++.+ ++ ......++++-.-+.-.|. ..+++.+++|.++|+++|+++|.||++..|...+ .......+
T Consensus 204 ~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G---~~~a~~~~- 279 (441)
T PRK05769 204 VLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG---KMFAIEHF- 279 (441)
T ss_pred HHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---ceehhhcc-
Confidence 12244322 21 1233444444322333454 3568889999999999999999999999875443 11122222
Q ss_pred HhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 372 KEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 372 ~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+..+.++ +|||.++ .|+++|++++ + +++++.+...... .++.+++++.++.+.++
T Consensus 280 gv~pDiv---t~~K~l~-~G~p~gav~~--~-----~~i~~~~~~~~~~-T~~g~p~~~aaa~a~L~ 334 (441)
T PRK05769 280 GVEPDII---TLAKAIA-GGLPLGAVIG--R-----AELMFLPPGSHAN-TFGGNPVAAAAALATLE 334 (441)
T ss_pred CCCCCEE---EEccccc-CCcccEEEEE--e-----hhhhhcCCCCCCC-CCCcCHHHHHHHHHHHH
Confidence 2122343 5899999 8999999998 5 3565433222223 33457788777776664
No 285
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.73 E-value=3.4e-07 Score=97.93 Aligned_cols=220 Identities=13% Similarity=0.005 Sum_probs=127.6
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCC------CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHE------YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~------Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
...|+|=..+.. ..+.+.+++...+.+....+ |.......++.....+..++-++... -+|-.
T Consensus 49 ~~~l~LiasEN~-------~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~--anvqp-- 117 (493)
T PRK13580 49 RSSLKLIASENY-------SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH--AYVQP-- 117 (493)
T ss_pred hcCceEeccccc-------CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc--ccccC--
Confidence 455666544432 45778888766665422222 33344455555555555555444332 34443
Q ss_pred cCCchhHHHHHHHHHHHhCCC-------------------------------CCEEEEcCCCChhhHH-----HHhhcCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPG-------------------------------VKTVYFPTPTWNGHVR-----FCTDSRL 280 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~-------------------------------gd~Vlv~~P~y~~~~~-----~~~~~G~ 280 (583)
-+ |++|...+ +..++.| ||+|+..++.-..+.. .+.....
T Consensus 118 ~S-g~~An~~v---~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~ 193 (493)
T PRK13580 118 HS-GADANLVA---FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMF 193 (493)
T ss_pred CC-cHHHHHHH---HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhhee
Confidence 44 44454443 2233332 7999988776544422 1222235
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
+.+.+++ |+++..+|++.+++.+. +.+..++++...|= |...+ +++|.++|+++|+++++|+++.--..++.
T Consensus 194 ~~~~y~v-d~~~g~iD~d~l~~~~~---~~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~ 265 (493)
T PRK13580 194 HQRSYGV-DPDTGLLDYDEIAALAR---EFKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGK 265 (493)
T ss_pred eeEeccc-CcccCccCHHHHHHHHh---hcCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhceeccc
Confidence 6777777 55567899999999884 44445555555555 33555 66667778999999999999865443321
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
... ..+....+--|+++|++|++ .|-|.|++++ + +++++.+.+..
T Consensus 266 --~~~--~~~~~~~~~D~vtgT~hKaL--~GP~GG~I~~--~-----~~l~~~L~~a~ 310 (493)
T PRK13580 266 --VFT--GDEDPVPHADIVTTTTHKTL--RGPRGGLVLA--K-----KEYADAVDKGC 310 (493)
T ss_pred --cch--hhcCCCCCCcEEEeCChhhc--cCCCeEEEEe--c-----HHHHHHHhhCC
Confidence 100 00000112347899999988 3555689888 5 47888875443
No 286
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.72 E-value=2.9e-06 Score=91.97 Aligned_cols=241 Identities=12% Similarity=0.046 Sum_probs=146.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...||+..|......|.- .+.+.+++.+.++... .+.. ..++...+|+.+..... ..+++.+ +++|
T Consensus 97 dG~~yiD~~~g~g~~~lGh~--~p~v~~av~~ql~~~~--~~~~---~~~~~~~lAe~l~~~~p---~~~~v~f--~~SG 164 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHA--DDEVLAALAETMKKGT--SFGA---PCLLENVLAEMVIDAVP---SVEMVRF--VNSG 164 (474)
T ss_pred CCCEEEEecccccccccCCC--CHHHHHHHHHHHhhCC--CCCC---CCHHHHHHHHHHHHhCC---CCCEEEE--eCCh
Confidence 45667888777665555643 3677777777766532 2211 12455556666654321 1378999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-h-------------cCC------eEEEEecccCCCCCCChhhH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-D-------------SRL------NVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~-------------~G~------~~~~v~~~d~~~~g~d~~~l 300 (583)
++|.+.+..+.+.... .++|+...-+|.+....+. . .|. .++.+|. + |++.+
T Consensus 165 sEA~e~AlklAR~~tg-r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------n-d~~~l 236 (474)
T PLN02482 165 TEACMGVLRLARAYTG-REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY------N-DLEAV 236 (474)
T ss_pred HHHHHHHHHHHHHhcC-CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC------C-ChHHH
Confidence 9999988776666544 4678887777877542211 0 011 1111221 1 67888
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
++.+++......++++-.-+.-.|.+. +++-+++|.++|++||+++|.||+...|..+. ......+ +-.+.
T Consensus 237 ~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~----~ga~~~~-gv~PD--- 308 (474)
T PLN02482 237 KKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY----GGAQEYF-GITPD--- 308 (474)
T ss_pred HHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc----chHhHHh-CCCCC---
Confidence 888865444455555543344456554 57889999999999999999999998774331 1111111 21223
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHh
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l 437 (583)
+-+|+|.+| .|+-+|.+++ . +++++.+.... ....++.++++..++.+.|
T Consensus 309 i~t~gK~lg-gG~Pigav~g--~-----~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L 361 (474)
T PLN02482 309 LTTLGKVIG-GGLPVGAYGG--R-----REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 361 (474)
T ss_pred EEEecchhh-CCCceEEEEE--c-----HHHHHhhccCCCcccccCcchhHHHHHHHHHHH
Confidence 347899998 8999999988 5 57888775321 1123334566655554443
No 287
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.72 E-value=2.5e-06 Score=91.63 Aligned_cols=245 Identities=13% Similarity=0.041 Sum_probs=141.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|. ..|.+.+++.+.+.. .....|... +.+..+|+.+...... ..+++++ +++
T Consensus 73 dG~~ylD~~~g~~~~~lGh--~hp~v~~Av~~ql~~l~~~~~~~~~----~~~~~lAe~L~~~~p~--~~~~v~f--~~S 142 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGH--RNPNVIAAVENQLAKQPLHSQELLD----PLRALLAKTLAALTPG--KLKYSFF--CNS 142 (442)
T ss_pred CCCEEEECCccHHhhhcCC--CCHHHHHHHHHHHHhCCCcccccCC----HHHHHHHHHHHHhCCC--CcCEEEE--eCC
Confidence 4556788877766555554 346677777666644 212223322 3444455544432211 1257888 999
Q ss_pred chhHHHHHHHHHHHhC--CCCCEEEEcCCCChhhHHHHhhc-CC------------eEEEEecccCCCCCCChhhHHHHH
Q psy14428 240 GSGSLRVGTAFLERFY--PGVKTVYFPTPTWNGHVRFCTDS-RL------------NVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~--~~gd~Vlv~~P~y~~~~~~~~~~-G~------------~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
|++|.+.+..+.+... .....|+..+-+|.+........ |- .+..+|. -|.+.+++.+
T Consensus 143 GsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~~l 215 (442)
T TIGR03372 143 GTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLKAL 215 (442)
T ss_pred chHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHHHH
Confidence 9999999876665543 22457888888877654322222 11 1222332 1556666666
Q ss_pred Hc---CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 305 KA---MPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 305 ~~---~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
+. ...+..++++-.-+---|.. .+++-++++.++|+++|+++|.||+...|.-.+ .......+ +-.+.++
T Consensus 216 ~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~-gv~PDiv-- 289 (442)
T TIGR03372 216 NECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG---KMFACEHE-GVQPDIL-- 289 (442)
T ss_pred HHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc---cchhhhhc-CCCCCee--
Confidence 43 22344455543333334544 468889999999999999999999998774333 12122222 2122333
Q ss_pred ecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH--HhccccCCChHHHHHHHHHh
Q psy14428 381 QSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL--IRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 381 ~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~--~~~~~~~~s~~~q~~~~~~l 437 (583)
++||.+| .| +-+|.+++ . +++++.+... .-...++.++++..++.+.|
T Consensus 290 -t~gK~lg-~G~~Pigavv~--~-----~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L 340 (442)
T TIGR03372 290 -CLAKALG-GGVMPIGATIA--T-----EAVFSVLFDNPFLHTTTFGGNPLACAAALATI 340 (442)
T ss_pred -eehhhhc-CCcccceEEEe--c-----HHHHHhhhccCccccCCCCCCHHHHHHHHHHH
Confidence 4899998 78 68999998 5 4777777421 11223444666666555544
No 288
>KOG1368|consensus
Probab=98.72 E-value=6.9e-07 Score=86.92 Aligned_cols=226 Identities=12% Similarity=0.109 Sum_probs=150.5
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
|...+++++.++.-.+.. |....-.-.|.+.+|+..+++-| +++ ++|..+-+-. ++..+..+|.+|
T Consensus 34 PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~GKEAg-------LFv--~SGTmgNlla---Im~Hc~~rg~ei 99 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFGKEAG-------LFV--PSGTMGNLLA---IMVHCHQRGSEI 99 (384)
T ss_pred ChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhCccce-------eee--cccccccHHH---HHHHhcCCCceE
Confidence 456788877766544323 55555568999999999987543 445 7776665543 456677679999
Q ss_pred EEcCCCChh-h--HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-----CCCcEEEEeCCCCCCCC-CCCCHHHH
Q psy14428 262 YFPTPTWNG-H--VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-----PERSILFLQTSSHNPTG-VDLSEDQW 332 (583)
Q Consensus 262 lv~~P~y~~-~--~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-----~~~~~~i~i~~p~NPTG-~~~s~~~~ 332 (583)
++.+-+... | -.+....|+.+.++.- +++..+++++++.++.-. .+.+++|.+-|-||-+| .+++.|++
T Consensus 100 i~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~ 177 (384)
T KOG1368|consen 100 IVGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEEL 177 (384)
T ss_pred EeccchheeehhccChhhhccceeEeeee--CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHH
Confidence 998876221 1 1234556777777654 455788999999998632 46789999998888887 99999999
Q ss_pred HHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHH
Q psy14428 333 RQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMS 412 (583)
Q Consensus 333 ~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~ 412 (583)
.++.++|+++++-+-.|-+-..-.-- ..-.+++.+....|.|=.+ |||.+|.| +|-+++ .+ .++|+
T Consensus 178 ~~v~~lak~~glkLH~DGARi~NAav---asgV~vk~i~~~fDSVsiC--LSKglgAP---VGSViV--G~----k~FI~ 243 (384)
T KOG1368|consen 178 DRVKALAKRHGLKLHMDGARIFNAAV---ASGVPVKKICSAFDSVSIC--LSKGLGAP---VGSVIV--GS----KDFID 243 (384)
T ss_pred HHHHHHHhccCCeeecchhhhhhHHH---HcCCCHHHHHHhhhhhhhh--hhccCCCC---cccEEE--cc----HHHHH
Confidence 99999999999999999874211100 0112344443334444332 79987644 787777 44 57898
Q ss_pred HHHHHHhccccCCChHHHHHHHHHh
Q psy14428 413 QLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 413 ~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
+.+........+.-..+..+++.+.
T Consensus 244 kA~~~RKalGGGmRQsGvLaaaaLv 268 (384)
T KOG1368|consen 244 KARHFRKALGGGMRQSGVLAAAALV 268 (384)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHH
Confidence 8887766665555444444444443
No 289
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.66 E-value=5.5e-06 Score=89.10 Aligned_cols=241 Identities=11% Similarity=0.030 Sum_probs=145.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++......+ +. +.+..+++.+..... ..+++.+ +++|
T Consensus 51 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~-~~----~~~~~la~~l~~~~p---~~~~v~f--~~sG 118 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHA--HPHITKAITEAAENGVLYGT-PT----ELEIEFAKMLKEAIP---SLEKVRF--VNSG 118 (428)
T ss_pred CCCEEEEccccccccccCCC--CHHHHHHHHHHHHhCCccCC-CC----HHHHHHHHHHHHhCC---CCcEEEE--eCCH
Confidence 45567888877776555643 36777777776654222222 22 333445555433221 2368999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-hhcCCe-------------------EEEEecccCCCCCCChhhH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TDSRLN-------------------VGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G~~-------------------~~~v~~~d~~~~g~d~~~l 300 (583)
++|.+.+..+.+.... ...|+...-+|....... ...|.. +..+|. -|++.+
T Consensus 119 seA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 190 (428)
T PRK12389 119 TEAVMTTIRVARAYTG-RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEAL 190 (428)
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHH
Confidence 9999988766665543 467887777777654322 211211 111111 167888
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
++.+++......++++-.-+.-.|.+ .+++-+++|.++|+++|+++|.||+...|.... . ......+-.+.+
T Consensus 191 ~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~----~-~a~~~~gv~PDi-- 263 (428)
T PRK12389 191 KEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMY----G-GAQDLLGVEPDL-- 263 (428)
T ss_pred HHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCc----c-hhhHHhCCCCCe--
Confidence 88786544445555554444445654 478889999999999999999999998884321 1 111111222233
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHh
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l 437 (583)
-+++|.++ .|+-+|.+++ + +++++.+.... ....++.++++..++.+.|
T Consensus 264 -vt~gK~lg-gG~Pi~av~~--~-----~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L 315 (428)
T PRK12389 264 -TALGKIIG-GGLPIGAYGG--R-----KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACL 315 (428)
T ss_pred -eeechhhc-CCCceeEEeE--H-----HHHHhhhccCCCcccccCCccCHHHHHHHHHHH
Confidence 37899998 8999999988 5 57887775211 1123345666655555444
No 290
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.66 E-value=3.8e-06 Score=80.76 Aligned_cols=174 Identities=14% Similarity=0.092 Sum_probs=127.4
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC-ChhhHHHHhhcCCeEEEEe
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT-WNGHVRFCTDSRLNVGAYR 286 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~-y~~~~~~~~~~G~~~~~v~ 286 (583)
+..|.+.+++|++- |.+-+ |+|+.++-+. .+..++.+||.|++..-. |..| -+++.+|.++..||
T Consensus 63 I~~F~~dlaeFlg~--------D~~R~--t~GARe~Kfa---vMhal~~~gd~vV~D~~aHYtty-vAAEragl~v~eVp 128 (382)
T COG1103 63 IKDFLEDLAEFLGM--------DEVRV--TAGAREAKFA---VMHALCKEGDWVVVDSLAHYTTY-VAAERAGLNVAEVP 128 (382)
T ss_pred HHHHHHHHHHHhCC--------ceeee--cccchhhHHH---HHHHhccCCCEEEEcCcchHHHH-HHHHhcCCeEEecC
Confidence 45677788888863 55667 9999999887 567788889999988776 6655 46788999999999
Q ss_pred cccCCCCCCChhhHHHHHHcC----CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC
Q psy14428 287 YFDNKTNGLDFAGMMEDIKAM----PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 287 ~~d~~~~g~d~~~l~~~l~~~----~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~ 362 (583)
-.+..++.++++...+.+++. .....+.+++.+.---| +..+-++++++|++++++++...+|.-=..+
T Consensus 129 ~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YG---Nl~Dakkva~ic~e~gvPlllN~AYt~Grmp---- 201 (382)
T COG1103 129 NTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYG---NLADAKKVAKICREYGVPLLLNCAYTVGRMP---- 201 (382)
T ss_pred CCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcC---CchhhHHHHHHHHHcCCceEeecceeecccc----
Confidence 654455788888877777653 24467777776655455 5566788999999999999999999543221
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
.+.+ +-+--+.++|=-|+++ +.--+|.+.. . +++.+.+.+
T Consensus 202 --vs~k----e~g~DFiVgSGHKsmA-As~PiGvl~~--~-----eE~ae~V~r 241 (382)
T COG1103 202 --VSGK----EIGADFIVGSGHKSMA-ASAPIGVLAM--S-----EEWAEIVLR 241 (382)
T ss_pred --cccc----ccCCCEEEecCccchh-ccCCeeEEee--h-----hHHHHHHHh
Confidence 1222 2345678899999998 6668999888 5 355555444
No 291
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.63 E-value=2.3e-06 Score=89.66 Aligned_cols=234 Identities=14% Similarity=0.153 Sum_probs=141.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC--CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL--DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+++.. ...|. .....+|-+.++++. ..++++. ++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~-~~~~~~la~~l~~~~--------~~~~v~~--~~ 88 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHN--HPEWVEEMSEQLEKLVVAGPMFE-HEEKEEMLEELSKWV--------NYEYVYM--GN 88 (364)
T ss_pred CCCEEEEcccChhhccCCCC--CHHHHHHHHHHHHhcCCccCCcC-CHHHHHHHHHHHhhc--------CCCEEEE--eC
Confidence 45567888877766666643 3566677776665411 11122 222344555555443 1358888 99
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc--------CCe-----EEEEecccCCCCCCChhhHHHHHH
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS--------RLN-----VGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~--------G~~-----~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
++++|++.+..+.+.. .+.++|+..+-+|.......-.. +.. +..+|+ . |.+.+++.+
T Consensus 89 SGseA~e~Alklar~~-~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~------~-d~~~l~~~i- 159 (364)
T PRK04013 89 SGTEAVEAALKFARLY-TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF------N-DVEAAKEAI- 159 (364)
T ss_pred chHHHHHHHHHHHHHH-hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC------C-CHHHHHHHh-
Confidence 9999999986665554 32488999998887764332221 111 122222 1 567777766
Q ss_pred cCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 306 AMPERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
.++..++++..-+.-.|. ..+++-+++|.++|+++|+++|+||+...+..+. ......+ +-.+.++ +++
T Consensus 160 --~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~----~~a~~~~-gv~PDiv---~~g 229 (364)
T PRK04013 160 --TKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK----FLAIEHY-KVEPDIV---TMG 229 (364)
T ss_pred --cCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc----hhHHHhc-CCCCCEE---Eec
Confidence 345666666555544444 4567889999999999999999999999884432 2222222 2233444 459
Q ss_pred ccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 385 KNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
|.++ .|+-+|.++. .. ++ . .......++.++++..++.+.++
T Consensus 230 K~lg-gG~P~~a~~~--~~-----~~-~---~~~~~~T~~gnp~~~aaa~a~l~ 271 (364)
T PRK04013 230 KGIG-NGVPVSLTLT--NF-----DV-E---RGKHGSTFGGNPLACKAVAVTLR 271 (364)
T ss_pred cccc-CCceeEEEEe--cc-----cc-c---CCCcCCCCCcCHHHHHHHHHHHH
Confidence 9998 7999999998 52 22 1 11122345566676666655543
No 292
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.62 E-value=5.1e-06 Score=85.50 Aligned_cols=262 Identities=13% Similarity=0.109 Sum_probs=161.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-C-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-N-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+..-|||..|.-....|+- .|.+.+++.+..+. . ....|. .+.+.++++.+.+..+ ..++|++ ++
T Consensus 40 ~G~~YlDf~~Giav~~lGH~--hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d~vff--~N 107 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGHC--HPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FADRVFF--CN 107 (404)
T ss_pred CCCEeeeeccceeeeccCCC--CHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCc---cccEEEE--cC
Confidence 45677898887776667753 47777777765543 1 112232 2455666666654321 3689999 99
Q ss_pred CchhHHHHHHHHHHHhCC-C-CCEEEEcCCCChh-------------hHHHHhhcCCeEEEEecccCCCCCCChhhHHHH
Q psy14428 239 SGSGSLRVGTAFLERFYP-G-VKTVYFPTPTWNG-------------HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 303 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~-~-gd~Vlv~~P~y~~-------------~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~ 303 (583)
+|++|.+.+..+.+.... + ..+|+...-+|.. |...|...=-.+..+|+. |++.++++
T Consensus 108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-------Di~al~~a 180 (404)
T COG4992 108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-------DIEALEAA 180 (404)
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-------CHHHHHHH
Confidence 999999998766665543 1 2356655555543 222222111123444441 78899888
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEec
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQS 382 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S 382 (583)
+ .+.+.++++-.=|==-|+.. +++-++++.++|.+||+++|.||+--.+...+ .......+ .-.+. |-+
T Consensus 181 i---~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG---k~fA~e~~-gV~PD---I~t 250 (404)
T COG4992 181 I---DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG---KLFAYEHY-GVEPD---ILT 250 (404)
T ss_pred h---ccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc---hHHHHHHh-CCCCC---EEE
Confidence 8 55788888766666667554 56678999999999999999999998887665 22222221 11223 345
Q ss_pred CcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh---CChhhhhhhhhHH-HHHHHHHH
Q psy14428 383 FSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL---SDPKLKAQCDETE-RIMSQLKI 458 (583)
Q Consensus 383 ~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l---~~~~~~~~~~~~~-~~~~~l~~ 458 (583)
+.|.+| -|+-||.+++ . +.+.+.+..-.--..++-++++..++...+ .++.+....++.- .+++.++.
T Consensus 251 laK~Lg-GG~PigA~la--~-----~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~ 322 (404)
T COG4992 251 LAKALG-GGFPIGAMLA--T-----EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRE 322 (404)
T ss_pred eecccc-CCccceeeEE--c-----hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHH
Confidence 689999 8999999999 4 234444444333456677777777665554 4555444433332 33444444
Q ss_pred H
Q psy14428 459 L 459 (583)
Q Consensus 459 ~ 459 (583)
+
T Consensus 323 l 323 (404)
T COG4992 323 L 323 (404)
T ss_pred H
Confidence 4
No 293
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.62 E-value=8.5e-06 Score=86.19 Aligned_cols=295 Identities=14% Similarity=0.093 Sum_probs=166.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-C-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-N-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...|||..|.-....|. ..|.|.+++++.++. . ....|... +-..++|+.+...... -..+.+++ ++
T Consensus 54 dG~~ylDf~sgi~v~~~GH--~hP~Vv~Av~~q~~~~~h~~~~~~~~----e~~v~~ae~L~~~~p~-~~~~~~~f--~~ 124 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGH--NHPRVVEAVKRQLAKLNHTHTRDLYY----EPYVELAEKLTALAPG-SGLKKVFF--GN 124 (447)
T ss_pred CCCEEEEcccCcchhccCC--CCHHHHHHHHHHHHHhhcccCCcccc----hhHHHHHHHHHHhCCc-ccCCeEEe--cC
Confidence 4556788888665555554 346777777765554 1 22333333 3334444444332111 03467888 99
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH-HHhhc-------------CCeEEEEecccCCC--CCCC------
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR-FCTDS-------------RLNVGAYRYFDNKT--NGLD------ 296 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~-------------G~~~~~v~~~d~~~--~g~d------ 296 (583)
+|++|.+.+..+.+.... ...|+...-+|..-.. .+... ...++.+|+.+... ++.+
T Consensus 125 sGaeA~E~AiKiAr~~Tg-r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~ 203 (447)
T COG0160 125 SGAEAVEAAIKIARAYTG-RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGD 203 (447)
T ss_pred CcHHHHHHHHHHHHHHhC-CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhH
Confidence 999999998777666655 5678887777754322 21111 12256666632211 1111
Q ss_pred --hhhHHHHHHcC---CCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH
Q psy14428 297 --FAGMMEDIKAM---PERSILFLQTSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF 370 (583)
Q Consensus 297 --~~~l~~~l~~~---~~~~~~i~i~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~ 370 (583)
.+.++..+... ..+..++++-.-+.=-| .+.+++-++++.++|++||+++|.||+-..|...+ ....+..+
T Consensus 204 ~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG---~~fa~E~~ 280 (447)
T COG0160 204 DALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG---KMFAFEHF 280 (447)
T ss_pred HHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---cchhhhhc
Confidence 22233323222 33455566555566566 45677788999999999999999999999988765 23333332
Q ss_pred HHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---Chhhhhhhh
Q psy14428 371 AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCD 447 (583)
Q Consensus 371 ~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~ 447 (583)
+-.+.+ -++||.+| .|+-+|.++. . +++.+..-.....+ ++-++++..++...|+ ++.+.++..
T Consensus 281 -gv~PDi---vt~aK~ig-~G~Pl~avv~--r-----~ei~~~~~g~~~~T-f~GNpva~Aaa~AvL~vie~e~L~~~a~ 347 (447)
T COG0160 281 -GVEPDI---VTLAKSLG-GGLPLSAVVG--R-----AEIMDWPPGGHGGT-FGGNPVACAAALAVLDVIEEENLLERAA 347 (447)
T ss_pred -CCCCCE---EEeccccc-CCCceeEEec--c-----HHhcccCCcccCCC-CCcCHHHHHHHHHHHHHHHHccHHHHHH
Confidence 112233 35799999 6999999999 5 46666333333333 5666666666665554 444444444
Q ss_pred hHHH-HHHHHHHHHhhc--cCCCccchhhHHHHhcCC
Q psy14428 448 ETER-IMSQLKILIRGF--YSNPPIHGARIVTEILSD 481 (583)
Q Consensus 448 ~~~~-~~~~l~~~~r~~--~~~~p~~g~~i~~~~l~~ 481 (583)
++-. +.+.+.++.... +...-..|.++-+++..+
T Consensus 348 ~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d 384 (447)
T COG0160 348 ELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKD 384 (447)
T ss_pred HHHHHHHHHHHHHHhhcCceecccccceEEEEEEecC
Confidence 3332 333333332211 222233456666666543
No 294
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.61 E-value=5.1e-06 Score=89.20 Aligned_cols=248 Identities=10% Similarity=0.006 Sum_probs=140.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...||+..|.+....|.- .+.+.+++.+.+.......+ +. +.+..+|+.+....+ ...+++.. +++|
T Consensus 51 dG~~yiD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~-~~----~~~~~la~~L~~~~~--~~~~~v~f--~~SG 119 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHS--HPKICDAIQQGAERGTSYGL-TS----EQEILFAEELFSYLG--LEDHKIRF--VSSG 119 (433)
T ss_pred CCCEEEEcccchhccccCCC--CHHHHHHHHHHHHhCCCCCC-CC----HHHHHHHHHHHHhCC--CCcCEEEE--eCch
Confidence 45567888887776556643 46777777776654221111 22 233444544443221 11258899 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcCCe------EEEEecccCC----CCCCChhhHHHHHHc
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSRLN------VGAYRYFDNK----TNGLDFAGMMEDIKA 306 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~------~~~v~~~d~~----~~g~d~~~l~~~l~~ 306 (583)
++|.+.+..+.+.... ...|+...-+|.+.... ....+.. ....+..... .+ -|.+.+++.+++
T Consensus 120 sEA~e~AiklAr~~tg-r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~ 197 (433)
T PRK00615 120 TEATMTAVRLARGITG-RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNS 197 (433)
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHh
Confidence 9999988666555433 46788777777774311 1111100 0000000000 01 167788888865
Q ss_pred CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 307 MPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
...+..++++-.-+.-.|.. .+++-+++|.++|++||+++|.||+...|..+. ......+ +-.+.++ +|||
T Consensus 198 ~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~----~ga~~~~-gv~PDi~---~~gK 269 (433)
T PRK00615 198 LGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQ----GGAAAIY-HVKPDIT---VYGK 269 (433)
T ss_pred cCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccH----hHHHHhc-CCCCCeE---EEcc
Confidence 44444455443333333543 467889999999999999999999998774331 1111111 2122333 4899
Q ss_pred cccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHh
Q psy14428 386 NMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l 437 (583)
.+| .|+-+|++++ + +++++.+.... ....++.+++...++.+.+
T Consensus 270 ~lg-gG~p~~av~~--~-----~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L 316 (433)
T PRK00615 270 ILG-GGLPAAAVVA--H-----KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASI 316 (433)
T ss_pred ccc-CCcceeeeee--c-----HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHH
Confidence 998 7888999999 6 57888775321 1123334566655555544
No 295
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.61 E-value=4.6e-06 Score=89.67 Aligned_cols=262 Identities=12% Similarity=0.046 Sum_probs=168.5
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCC--C-
Q psy14428 181 YVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYP--G- 257 (583)
Q Consensus 181 ~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~--~- 257 (583)
.+++...+++...+..+. ..-.-..+..++.+.+..++.+-.+.+ ..-.=.+ |+||++|..++..+.+.... .
T Consensus 73 ~~~~~a~~~~~~~~~~nl-~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~--t~GgTean~lal~aar~~~~~~~~ 148 (460)
T COG0076 73 RVPPVAAELLVSALNKNL-GDPDESPAAAELEERVVNMLSDLLGAP-EEASGTF--TSGGTEANLLALLAARERWRKRAL 148 (460)
T ss_pred CCHHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCCC-CCCceEE--EcChHHHHHHHHHHHHHHHHHHhh
Confidence 355667777666665421 111112377899999999998876655 2223455 99999999877544433221 0
Q ss_pred --------CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH
Q psy14428 258 --------VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 258 --------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
..+|+++.-....+...+...|+.+..+++ ++.+..+|++++++.+.+.+... +++-.-+.-||| +.
T Consensus 149 ~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~-~~~~~~id~~~l~~~i~~~t~~g-~vV~~aGtT~~G---~i 223 (460)
T COG0076 149 AESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPT-VPTDYRIDVDALEEAIDENTIGG-VVVGTAGTTDTG---SI 223 (460)
T ss_pred hcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEe-ccCccccCHHHHHHHHHhhccCc-eEEEEecCCCCC---cc
Confidence 126888887888888899999999999999 55468999999999996553322 366667777888 45
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE-EEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC-LAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi-~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
|.+++|.++|+++++++.+|-+|+.+...-.+... .+...-+.|. +.-|+-|.. +.=.-+||++. .+++
T Consensus 224 Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~----~~~f~l~~vdSIt~d~HK~g-~aP~~~G~il~--rd~e--- 293 (460)
T COG0076 224 DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG----RWDFGLEGVDSITVDGHKYG-LAPIGCGVVLF--RDEE--- 293 (460)
T ss_pred CCHHHHHHHHHHcCCcEEEEccccceeecccCccc----hhhcCCCCceEEEECccccc-CCCCCceEEEE--ECHH---
Confidence 67888899999999999999999988753110111 1111223443 444788955 57788999999 7642
Q ss_pred HHHHHHHHHH---h-----ccc-----cCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 409 RIMSQLKILI---R-----GFY-----SNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 409 ~li~~l~~~~---~-----~~~-----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
.+.+.+.... . +.. .+...+.|++....+..+.+.+..++..+....+.+.++
T Consensus 294 ~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~ 359 (460)
T COG0076 294 ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELE 359 (460)
T ss_pred HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 4554444221 1 111 111345566666777766777766665555555544443
No 296
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.59 E-value=1.5e-05 Score=83.07 Aligned_cols=241 Identities=15% Similarity=0.097 Sum_probs=156.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+..-||+..+.=..-+|.. .|.|.+++++.++++ ..|..+ .++.-.+|+.+.+.. -..|.|-+ ++.+
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~--~p~V~~Av~~~l~~G--~~fg~P---te~Ei~~Aell~~~~---p~~e~vrf--vnSG 118 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHA--HPAVVEAVQEQLERG--LSFGAP---TELEVELAELLIERV---PSIEKVRF--VNSG 118 (432)
T ss_pred CCCEeeehhccCcccccCCC--CHHHHHHHHHHHHhc--CCCCCC---CHHHHHHHHHHHHhc---CcccEEEE--ecch
Confidence 34455666544433334543 367889988888774 445433 244555556555432 12378999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cC-------------C------eEEEEecccCCCCCCChhhH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SR-------------L------NVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G-------------~------~~~~v~~~d~~~~g~d~~~l 300 (583)
++|...+.++.+.+.. -|.|+..+=+|......+.. .| . .++.+|+. |++.+
T Consensus 119 TEAtmsAiRlARa~Tg-R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~al 190 (432)
T COG0001 119 TEATMSAIRLARAYTG-RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEAL 190 (432)
T ss_pred hHHHHHHHHHHHHhhC-CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHHH
Confidence 9999888777777776 68999998888877554432 22 1 23344441 88999
Q ss_pred HHHHHcCCCC-cEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 301 MEDIKAMPER-SILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 301 ~~~l~~~~~~-~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
++.+++.... ..+|+=|-+.|= |. .-.++-++.|.++|+++++++|.||+--.|...- .. .+.+ ++-.=
T Consensus 191 ~~~~~~~g~~IAaVIvEPv~gn~-g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~--gG---aq~~---~gi~P 261 (432)
T COG0001 191 EEAFEEYGDDIAAVIVEPVAGNM-GVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL--GG---AQGY---YGVEP 261 (432)
T ss_pred HHHHHHcCCcEEEEEeccccCCC-CCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC--cc---cccc---cCcCc
Confidence 9999877444 444444667773 44 3466778999999999999999999988877541 01 1111 11111
Q ss_pred EEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHhC
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l~ 438 (583)
=+-+|.|.+| -|+-+|.+.+ . .++++.+.... +.-..+-++++..+....++
T Consensus 262 DlttlGKiIG-GGlP~ga~gG--r-----~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~ 316 (432)
T COG0001 262 DLTTLGKIIG-GGLPIGAFGG--R-----AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLE 316 (432)
T ss_pred chhhhhhhhc-CCcceeeecc--H-----HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHH
Confidence 2456899999 9999999998 5 58888777543 22345566777666555543
No 297
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.56 E-value=8.2e-06 Score=88.27 Aligned_cols=256 Identities=13% Similarity=0.047 Sum_probs=144.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|. ..+.+.+++.+.++.. ....|.. .+.+..+|+.+..... -..+++.+ +++
T Consensus 80 dG~~ylD~~~g~~~~~lGH--~~p~v~~Ai~~ql~~l~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f--~~S 149 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGH--RNPVVVSAVQNQLAKQPLHSQELL----DPLRAMLAKTLAALTP--GKLKYSFF--CNS 149 (459)
T ss_pred CCCEEEECCcCHHhhhcCC--CCHHHHHHHHHHHhhCcccccccC----CHHHHHHHHHHHHhCC--CCCCEEEE--eCC
Confidence 3556788877766655664 3467777777766541 1122222 3444455555543221 11257888 999
Q ss_pred chhHHHHHHHHHHHhCC-C-CCEEEEcCCCChhhHHHHh-hcCCe------------EEEEecccCCCCCCChhhHHHHH
Q psy14428 240 GSGSLRVGTAFLERFYP-G-VKTVYFPTPTWNGHVRFCT-DSRLN------------VGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~-~-gd~Vlv~~P~y~~~~~~~~-~~G~~------------~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
|++|.+.+..+.+.... . ...|+...-+|.+...... ..|-. +..+|+ -|.+.+++.+
T Consensus 150 GsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l 222 (459)
T PRK11522 150 GTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTAL 222 (459)
T ss_pred chHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-------CCHHHHHHHH
Confidence 99999988766655542 1 2367777777776543222 22211 111221 1566777776
Q ss_pred HcC---CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 305 KAM---PERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 305 ~~~---~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
+.. ..+..++++-.-+-=.|.. .+++-++++.++|++||+++|.||+...|...+ .......+ +-.+.++
T Consensus 223 ~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~-gv~PDiv-- 296 (459)
T PRK11522 223 SECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG---KMFACEHE-NVQPDIL-- 296 (459)
T ss_pred HHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc---hhhhhhcc-CCCCCEE--
Confidence 532 2333444443333334553 567789999999999999999999997764333 11122211 1122333
Q ss_pred ecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH--HhccccCCChHHHHHHHH---HhCChhhhhhhhh
Q psy14428 381 QSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL--IRGFYSNPPIHGARIVTE---ILSDPKLKAQCDE 448 (583)
Q Consensus 381 ~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~--~~~~~~~~s~~~q~~~~~---~l~~~~~~~~~~~ 448 (583)
+|+|.+| .| +-+|.+++ . +++++.+... .-...++.++++..++.+ .++++.+..+..+
T Consensus 297 -t~gK~lg-gG~~Pigav~~--~-----~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~ 361 (459)
T PRK11522 297 -CLAKALG-GGVMPIGATIA--T-----EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQ 361 (459)
T ss_pred -Eechhhh-CCCccceeEEE--c-----HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 7899998 77 68999999 5 4677665421 112233445655555444 4444444444333
No 298
>PRK15029 arginine decarboxylase; Provisional
Probab=98.54 E-value=3.7e-06 Score=94.73 Aligned_cols=177 Identities=12% Similarity=0.067 Sum_probs=118.5
Q ss_pred CCCC-CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeE
Q psy14428 204 NIGG-DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNV 282 (583)
Q Consensus 204 ~~~G-~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 282 (583)
.+.| +.+-.+..|+.++.. .-.++ ++|++.++.. ++..++.+||.|+++.-+.-.....+...|+++
T Consensus 202 ~p~G~I~eAq~~aA~~fgA~-------~t~Fl--vNGST~gn~a---~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~P 269 (755)
T PRK15029 202 DHTGAFGESEKYAARVFGAD-------RSWSV--VVGTSGSNRT---IMQACMTDNDVVVVDRNCHKSIEQGLILTGAKP 269 (755)
T ss_pred CCCcHHHHHHHHHHHHhCCC-------cEEEE--eCChhHHHHH---HHHHhcCCCCEEEeecccHHHHHHHHHHcCCeE
Confidence 3444 456666666666542 35666 9999999986 455577779999999999999989999999999
Q ss_pred EEEecccCCCC----CCC-----hhhHHHHHHcCCC-------CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEE
Q psy14428 283 GAYRYFDNKTN----GLD-----FAGMMEDIKAMPE-------RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYP 346 (583)
Q Consensus 283 ~~v~~~d~~~~----g~d-----~~~l~~~l~~~~~-------~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~i 346 (583)
++++. .-+.+ +++ ++.+++++++.+. +.+++++++|.- -|.+.+. ++|++.|.+++++|
T Consensus 270 vyl~P-~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di---~~I~~~~h~~~~~l 344 (755)
T PRK15029 270 VYMVP-SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNA---KEAQDLLEKTSDRL 344 (755)
T ss_pred EEecc-cccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCH---HHHHHHHHhcCCeE
Confidence 99854 21222 334 7888888866422 223666655533 4888874 56688899999999
Q ss_pred EEeccCCC-CCCCCCCCchHHHHHHH-H-hcCcEEEEecCcccccccCccceEEEE
Q psy14428 347 FFDMAYLG-LTSGDFDKDAFSLRYFA-K-EVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 347 I~De~Y~~-l~~~~~~~~~~~~~~~~-~-~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
++||||+. |.|.+......++..-. . .+..++++.|.-|++ |++.-|.++-
T Consensus 345 lvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LH 398 (755)
T PRK15029 345 HFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIH 398 (755)
T ss_pred EEECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhhe
Confidence 99999864 44543111011110000 1 223469999999997 6787775544
No 299
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.54 E-value=2.7e-06 Score=98.54 Aligned_cols=164 Identities=8% Similarity=0.080 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch----hHHHHHHHHHHHhC-CCCC----EEEEcCCCChhhHHHHhhcC
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS----GSLRVGTAFLERFY-PGVK----TVYFPTPTWNGHVRFCTDSR 279 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~----~al~l~~~~l~~~~-~~gd----~Vlv~~P~y~~~~~~~~~~G 279 (583)
.++|+.++++.+ . ++|.+ +++++ .++.++ ++.+. ++|| .|+++..........+...|
T Consensus 571 ~~~r~~la~i~g----~----~~v~f--~pnaga~ge~a~~~v---i~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G 637 (993)
T PLN02414 571 EDLGDLLCEITG----F----DSFSL--QPNAGAAGEYAGLMV---IRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCG 637 (993)
T ss_pred HHHHHHHHHHhC----C----CeEEE--cCCCcHHHHHHHHHH---HHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCC
Confidence 356666666653 2 78988 77777 566664 33344 4477 89999888777777888899
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.+|+ |+ ++.+|++++++.+...+++++++++.+|+|-+|...+ +++|.++|+++|++++.|-+..--...-
T Consensus 638 ~~vv~v~~-d~-~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~~l 712 (993)
T PLN02414 638 MKIVVVGT-DA-KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQVGL 712 (993)
T ss_pred CEEEEecc-CC-CCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCHHhccCc
Confidence 99999999 54 4689999999999654467899999999999987754 6777888999999999999972211000
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccc----cCccceEEEE
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGL----YGERVGTFSV 399 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l----~GlRiG~lv~ 399 (583)
.. +...+--++..|.-|+|+. -|=-+|.+.+
T Consensus 713 --------~~-p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~ 747 (993)
T PLN02414 713 --------TS-PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 747 (993)
T ss_pred --------CC-ccccCCCEEEecCCccCCcCcccCCCCeeeEEE
Confidence 00 1123445777788897752 2344788877
No 300
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.53 E-value=2e-05 Score=85.25 Aligned_cols=250 Identities=12% Similarity=0.089 Sum_probs=139.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC--CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL--DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+++.. ...|... +.+..+++.+..... ...+++.+ ++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~ql~~~~~~~~~~~~~----~~~~~lae~L~~~~p--~~~~~v~f--~~ 120 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYS--HPKLVKAVQEQVALIQHSMIGYTHS----ERAIRVAEKLAEISP--IENPKVLF--GL 120 (457)
T ss_pred CCCEEEECCcCHHhhccCCC--CHHHHHHHHHHHHhccccccCccCC----HHHHHHHHHHHhhCC--CCcCEEEE--eC
Confidence 45567888888766666653 4677777776665411 1122222 333344444443221 12258999 99
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH-HhhcC--------C-----eEEEEecccCCC--CC----CChh
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF-CTDSR--------L-----NVGAYRYFDNKT--NG----LDFA 298 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G--------~-----~~~~v~~~d~~~--~g----~d~~ 298 (583)
+|++|.+.+..+.+.... ...|+...-+|.+.... ....| . .++.+|..+... ++ -+.+
T Consensus 121 SGsEA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 199 (457)
T PRK05639 121 SGSDAVDMAIKVSKFSTR-RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPD 199 (457)
T ss_pred chHHHHHHHHHHHHHhcC-CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHH
Confidence 999999988666655543 56788888887764322 11111 0 133444421100 00 0122
Q ss_pred --------hHHHHHHc---CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH
Q psy14428 299 --------GMMEDIKA---MPERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS 366 (583)
Q Consensus 299 --------~l~~~l~~---~~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~ 366 (583)
.+++.+.. ...+..++++---+--.|. ..+++-+++|.++|+++++++|.||+...|...+ ....
T Consensus 200 ~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a 276 (457)
T PRK05639 200 ELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG---KWFA 276 (457)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc---hHHH
Confidence 23333221 1334555555444444565 4578899999999999999999999998874433 1112
Q ss_pred HHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 367 LRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 367 ~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
...+ +-.+.+++ |+|.++ .|+-+|.+++ . +++++..... ....++.++++..++.+.+
T Consensus 277 ~~~~-gv~PDiv~---~gK~l~-gG~pi~av~~--~-----~~i~~~~~~~-~~~T~~g~p~~~aaa~a~l 334 (457)
T PRK05639 277 SEWF-EVKPDLII---FGKGVA-SGMGLSGVIG--R-----KELMDLTSGS-ALLTPAANPVISAAAEATL 334 (457)
T ss_pred HHhc-CCCCCEEE---echhhc-CCCcceeEEe--h-----HHHHhhcCCC-cccCCCcCHHHHHHHHHHH
Confidence 2211 22233444 799998 7899999999 5 4677622111 1123445555555554444
No 301
>PRK06062 hypothetical protein; Provisional
Probab=98.52 E-value=2.3e-05 Score=84.73 Aligned_cols=264 Identities=11% Similarity=0.036 Sum_probs=147.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.. ..+.+.. ..+.+..+|+.+..... -..+++.+ +++|
T Consensus 51 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~--~~~~~~~-~~~~~~~lae~L~~~~p--~~~~~v~f--~~SG 121 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQ--HPKVVAAIQEQAARL--CTVAPAH-ANDARSEAARLIAERAP--GDLSKVFF--TNGG 121 (451)
T ss_pred CCCEEEEcccCHHhhcCCCC--CHHHHHHHHHHHHhc--CCcCCcc-CCHHHHHHHHHHHHhCC--CCCCEEEE--cCCh
Confidence 45677898888776666653 366777776666541 1111111 22344455555543211 11368999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cCC-----------eEEEEecccCCC--CC--CC-------h
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SRL-----------NVGAYRYFDNKT--NG--LD-------F 297 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~-----------~~~~v~~~d~~~--~g--~d-------~ 297 (583)
++|.+.+..+.+.... ..+|+...-+|......... .|. .+..++..+... ++ -| +
T Consensus 122 sEAve~AlklAr~~tg-r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 122 ADANEHAVRMARLHTG-RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred HHHHHHHHHHHHHhhC-CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 9999988666555433 46788887777665332221 111 112222110000 00 01 4
Q ss_pred hhHHHHHHcCC-CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcC
Q psy14428 298 AGMMEDIKAMP-ERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVG 375 (583)
Q Consensus 298 ~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 375 (583)
+.+++.++... .+..++++-.-+.--|.+ .+++-+++|.++|+++|+++|.||+...|...+ .......+ +-.+
T Consensus 201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~~~~-gv~P 276 (451)
T PRK06062 201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG---KWFAIEHF-GVVP 276 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc---HHHHHHhc-CCCC
Confidence 56666665332 333444443223223544 578899999999999999999999998874333 11122221 2122
Q ss_pred cEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHH--HhccccCCChHHHHHHHHHh---CChhhhhhhhhH
Q psy14428 376 QLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKIL--IRGFYSNPPIHGARIVTEIL---SDPKLKAQCDET 449 (583)
Q Consensus 376 ~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~--~~~~~~~~s~~~q~~~~~~l---~~~~~~~~~~~~ 449 (583)
. +-+|+|.++ .|+ -+|.+++ . +++++.+... .....++.++++..++.+.| +++.+.++..+.
T Consensus 277 D---i~t~gK~lg-gG~~Pigav~~--~-----~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~ 345 (451)
T PRK06062 277 D---LITFAKGVN-SGYVPLGGVAI--S-----EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARI 345 (451)
T ss_pred C---eeeechhhh-cCCcCcEEEEE--c-----HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3 446899998 784 8999998 6 4777777532 12224455566666555544 344444444443
No 302
>PRK07046 aminotransferase; Validated
Probab=98.50 E-value=0.00011 Score=79.44 Aligned_cols=238 Identities=9% Similarity=0.007 Sum_probs=141.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...||+..|......|.- .|.+.+++.+.++......+ +. +....+|+.+.+.. ..+++.+ +++|
T Consensus 73 DG~~yiD~~~g~g~~~lGh~--~p~i~~Av~~q~~~~~~~~~-~~----~~~~~lAe~l~~~~----~~~~v~F--~nSG 139 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHS--PAPVARALAEQARRGLTTML-PS----EDAAWVGEELARRF----GLPYWQV--ATTA 139 (453)
T ss_pred CCCEEEEecccccccccCCC--CHHHHHHHHHHHHhCCCCCC-CC----HHHHHHHHHHHHHh----CCCEEEE--ECCH
Confidence 45567888777665555543 36777777777765322222 22 34444555554332 2478999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH--Hhh-c----------CC------eEEEEecccCCCCCCChhhHH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF--CTD-S----------RL------NVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~--~~~-~----------G~------~~~~v~~~d~~~~g~d~~~l~ 301 (583)
++|.+.+..+.+.... .+.|+..+-+|.+.... ... . |. .+..+|+ + |++.++
T Consensus 140 tEA~e~AlrlAR~~TG-r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------n-d~~~l~ 211 (453)
T PRK07046 140 TDANRFVLRWARAVTG-RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF------N-DLAALE 211 (453)
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC------C-CHHHHH
Confidence 9999988777666544 57788888778775321 110 0 10 1111221 1 678888
Q ss_pred HHHHcCCCCcEEEEe-CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 302 EDIKAMPERSILFLQ-TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 302 ~~l~~~~~~~~~i~i-~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
+.+. ..+..++++ |-..|---...+++-++++.++|+++|+++|.||+.. |..+- .. .....+-.+.++
T Consensus 212 ~~l~--~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~--Gg---~~~~~gv~PDi~-- 281 (453)
T PRK07046 212 AALA--DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGP--GG---YTRAHGLEPDFL-- 281 (453)
T ss_pred HHhC--CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCC--cc---hhHHhCCCccce--
Confidence 7773 233444444 3333322244567889999999999999999999976 54321 01 111112222333
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH---------hccccCCChHHHHHHHHHhC
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---------RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---------~~~~~~~s~~~q~~~~~~l~ 438 (583)
+|+|.+| .|+-+|.+++ . +++++.+.... ....++.++++..++...|+
T Consensus 282 -t~gK~lg-gG~Pi~av~g--~-----~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~ 339 (453)
T PRK07046 282 -VVGKPIA-GGVPCAVYGF--S-----AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLA 339 (453)
T ss_pred -eehhhhc-CCCcceeeee--h-----HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHH
Confidence 5799998 8999999998 5 57887775321 11234556677666555543
No 303
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.48 E-value=1.3e-05 Score=86.01 Aligned_cols=254 Identities=9% Similarity=-0.007 Sum_probs=144.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCC-CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGG-DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G-~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+++. .|....+ ..+.+..+|+.+.+... -..+++.. +++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~---~~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f--~~S 111 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYN--HPQLNAAMKSQIDAM---SHVMFGGITHPPAIELCRKLVAMTP--QPLECVFL--ADS 111 (428)
T ss_pred CCCEEEEcchhHHhhcCCCC--CHHHHHHHHHHHhhc---CCccccccCCHHHHHHHHHHHhhCC--CCcCEEEE--eCC
Confidence 45677899888877666653 377888877766541 1111111 22345555666654321 12368999 999
Q ss_pred chhHHHHHHHHHHHhC----CCCCEEEEcCCCChhhHHH-HhhcCC-------------eEEEEecccCCC---C-CCCh
Q psy14428 240 GSGSLRVGTAFLERFY----PGVKTVYFPTPTWNGHVRF-CTDSRL-------------NVGAYRYFDNKT---N-GLDF 297 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~----~~gd~Vlv~~P~y~~~~~~-~~~~G~-------------~~~~v~~~d~~~---~-g~d~ 297 (583)
|++|.+.+..+.+... .+..+|+...-+|.+.... +...+. .++.+|..+... + .-|+
T Consensus 112 GsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~ 191 (428)
T PRK07986 112 GSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDI 191 (428)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHH
Confidence 9999998766655441 2236788888888764321 111111 112222210000 0 0145
Q ss_pred hhHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcC
Q psy14428 298 AGMMEDIKAMPERSILFLQTS-SHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVG 375 (583)
Q Consensus 298 ~~l~~~l~~~~~~~~~i~i~~-p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 375 (583)
+.+++.++...++..++++-. .+.-.|. ..+++-+++|.++|+++++++|.||+...|...+ .......+ +-.+
T Consensus 192 ~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG---~~fa~~~~-gv~P 267 (428)
T PRK07986 192 APFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG---KLFACEHA-GIAP 267 (428)
T ss_pred HHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC---Ceeeeccc-CCCC
Confidence 667777754434444555433 2444454 4567899999999999999999999997774333 11111111 1122
Q ss_pred cEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHH-----hccccCCChHHHHHHHHHhC
Q psy14428 376 QLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILI-----RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 376 ~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~-----~~~~~~~s~~~q~~~~~~l~ 438 (583)
.++ +|+|.++ .| +-+|.+++ + +++++.+.... ....++.++++..++.+.++
T Consensus 268 Di~---t~gK~l~-gG~~p~~av~~--~-----~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~ 325 (428)
T PRK07986 268 DIL---CLGKALT-GGTMTLSATLT--T-----REVAETISNGEAGCFMHGPTFMGNPLACAVANASLS 325 (428)
T ss_pred CEE---Eechhhh-CCcccCcchhc--h-----HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 333 5899997 78 58888888 5 57888776421 12233456666666555443
No 304
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.48 E-value=1.3e-05 Score=87.06 Aligned_cols=204 Identities=15% Similarity=0.084 Sum_probs=118.2
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCC---CCC---CHH----HHHHHHHHHhCCCCCCCCCCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYAN---IGG---DAK----FCKLAAQLAYGEDFPAFKDNR 231 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~---~~G---~~~----Lr~aia~~~~~~~g~~~~~~~ 231 (583)
....++|-..+.. .++.+.+++...+.+....+|+. ..| ... .|+.++++++ .++++
T Consensus 33 ~~~~l~l~~sen~-------~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~------a~~~~ 99 (452)
T PTZ00094 33 QIEGLELIASENF-------TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFG------LDPEE 99 (452)
T ss_pred HHcCeeEeccccc-------CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhC------CCccc
Confidence 3456777666643 45778888776664321112221 122 122 3456666664 24566
Q ss_pred eEE-EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----------cCCeEEEEecccCCCCCCChhhH
Q psy14428 232 LAI-VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----------SRLNVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 232 I~i-~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----------~G~~~~~v~~~d~~~~g~d~~~l 300 (583)
+.+ ++.++++++...+ +..+..+||.|++....+......... .+.+++.++. +.+ +.+|++.+
T Consensus 100 ~~~~~~~~sgt~an~~v---~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~-~~~-g~id~~~L 174 (452)
T PTZ00094 100 WGVNVQPYSGSPANFAV---YTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQV-NEK-GLIDYDKL 174 (452)
T ss_pred ceeecCCCchHHHHHHH---HHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeeccc-CCC-CCcCHHHH
Confidence 544 1126788887774 344566799999976665544332211 1133445555 433 68899999
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
++.++.. +++++++. ++.+|...+.++ |.++|+++|+++++|++..--..... ....++ .+--+++
T Consensus 175 ~~~l~~~--~~~lvi~~--~s~~g~~~di~~---I~~i~~~~ga~l~vDaaq~~G~i~~~-~~~~~~------~~~D~l~ 240 (452)
T PTZ00094 175 EELAKAF--RPKLIIAG--ASAYPRDIDYKR---FREICDSVGAYLMADIAHTSGLVAAG-VLPSPF------PYADVVT 240 (452)
T ss_pred HHHHHHh--CCCEEEEe--CCCCCCccCHHH---HHHHHHHcCCEEEEeccchhccccCC-CCCCCC------CCCcEEE
Confidence 9988542 34455543 334898887554 46778899999999999754332210 000011 1234789
Q ss_pred ecCcccccccCccceEEEE
Q psy14428 381 QSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~ 399 (583)
.|..|++ .|-+-|++++
T Consensus 241 ~S~hK~l--~GP~Gg~l~~ 257 (452)
T PTZ00094 241 TTTHKSL--RGPRSGLIFY 257 (452)
T ss_pred cCCccCC--CCCCceEEEE
Confidence 9999987 3444588887
No 305
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.46 E-value=4.2e-06 Score=87.85 Aligned_cols=191 Identities=11% Similarity=-0.010 Sum_probs=117.6
Q ss_pred CCCChHHHHHHHHHhccC---CCCCCCCC-------CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC-chhHHHHHH
Q psy14428 180 PYVLPSVKEAERRIYEKN---LDHEYANI-------GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS-GSGSLRVGT 248 (583)
Q Consensus 180 p~~~~~v~~a~~~~~~~~---~~~~Y~~~-------~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G-~~~al~l~~ 248 (583)
...++.|.+++.+.+.+. ....|... .-+.+.|+.++++++. -++++|++ |+| ++++++.++
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~-----~~~~~vvf--~~gs~T~a~~~~~ 80 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI-----PDNYKVLF--LQGGATGQFAAVP 80 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC-----CCCceEEE--EcCCchHHHHHHH
Confidence 336788888887765320 01112222 2246778888888852 13578999 988 999999963
Q ss_pred HHHHHhCC---CCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCC-ChhhHH-HHHHcCCCCcEEEEeCCCCCCC
Q psy14428 249 AFLERFYP---GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGL-DFAGMM-EDIKAMPERSILFLQTSSHNPT 323 (583)
Q Consensus 249 ~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~-d~~~l~-~~l~~~~~~~~~i~i~~p~NPT 323 (583)
..+.. +||.|++ .|.......+++..|++++.++. ++. .+. +...++ ..+ .++++++.++...|.|
T Consensus 81 ---~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~-~~~-g~~~~~~~~~~~~~---~~~~~lV~~~h~~t~t 151 (355)
T cd00611 81 ---LNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAA-KEE-GKYTKIPDVETWDL---APDAAYVHYCSNETIH 151 (355)
T ss_pred ---HhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEec-ccc-cCCCCCCCHhhcCC---CCCCCEEEEeCCcccc
Confidence 33343 3555543 33333344477888999998887 432 112 322222 222 5678899999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCC
Q psy14428 324 GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPT 403 (583)
Q Consensus 324 G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~ 403 (583)
|..+. ++++.+|+++++|-+-.--... ..+.. .+ +.+.|--|.+|.+| +|.+++ .
T Consensus 152 G~~~~--------~i~~~~g~~~~VDa~qs~g~~~------idv~~----~~--~~~ss~~K~lGP~G--~g~l~~--~- 206 (355)
T cd00611 152 GVEFD--------EVPDTGGVPLVADMSSNILSRP------IDVSK----FG--VIYAGAQKNLGPAG--VTVVIV--R- 206 (355)
T ss_pred cEEcc--------eecccCCCeEEEEccccccCCC------CCHHH----hC--EEEeecccccCCCc--eEEEEE--C-
Confidence 99743 3445599999999985433221 11222 22 35566789998776 588888 5
Q ss_pred chhHHHHHHHHH
Q psy14428 404 SDETERIMSQLK 415 (583)
Q Consensus 404 ~~~~~~li~~l~ 415 (583)
+++++++.
T Consensus 207 ----~~~~~~~~ 214 (355)
T cd00611 207 ----KDLLGKAR 214 (355)
T ss_pred ----HHHHhhcc
Confidence 45665544
No 306
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.46 E-value=5.6e-05 Score=81.78 Aligned_cols=254 Identities=9% Similarity=0.009 Sum_probs=144.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+++. .|... .-..+.+..+|+.+.+..+. .-+++.+ +++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~---~~~~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f--~~s 122 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHA--NPRINAALKDQLDTL---EHAMLAGCTHEPAIELAERLAALTGG--TLGHAFF--ASD 122 (453)
T ss_pred CCCEEEEcchHHHHhcCCCC--CHHHHHHHHHHHHhc---CCccccccCCHHHHHHHHHHHHhCCC--CCCEEEE--eCC
Confidence 45677899888776666653 367777777666541 11111 01123444555555432211 1258899 999
Q ss_pred chhHHHHHHHHHHHh-----CCCCCEEEEcCCCChhhHH-HHhhcCC------------eEEEEecccCCC--CCC----
Q psy14428 240 GSGSLRVGTAFLERF-----YPGVKTVYFPTPTWNGHVR-FCTDSRL------------NVGAYRYFDNKT--NGL---- 295 (583)
Q Consensus 240 ~~~al~l~~~~l~~~-----~~~gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~d~~~--~g~---- 295 (583)
|++|.+.+..+.+.. .....+|+...-+|..... .+...|. .+..+|..+... .+.
T Consensus 123 GseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 202 (453)
T PRK06943 123 GASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAAD 202 (453)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHH
Confidence 999999875554322 1223678888888876532 1111110 122233211100 000
Q ss_pred ----ChhhHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 296 ----DFAGMMEDIKAMPERSILFLQTS-SHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 296 ----d~~~l~~~l~~~~~~~~~i~i~~-p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
+++.+++.++....+..++++-. .+.-.|. ..+++-+++|.++|++||+++|.||+...|..-+ .......
T Consensus 203 ~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG---~~fa~~~ 279 (453)
T PRK06943 203 VAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG---TFFACEQ 279 (453)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc---chhHHHh
Confidence 23556666654334445555433 2555565 5689999999999999999999999998885433 1222222
Q ss_pred HHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH------HhccccCCChHHHHHHHHHhC
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL------IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~------~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+ +-.+.+++ ++|.++ .| +-+|.+++ . +++.+.+..- .....++.++++..++.+.|+
T Consensus 280 ~-gv~PDivt---~gKgl~-gG~~Pi~av~~--~-----~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 343 (453)
T PRK06943 280 A-GVWPDFLC---LSKGIS-GGYLPLSLVLS--R-----DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLD 343 (453)
T ss_pred C-CCCCCeEe---eehhhc-cCcccceEEEE--c-----HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHH
Confidence 2 22334444 489998 78 58999999 6 4777776531 112234456666666555543
No 307
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.46 E-value=3.3e-05 Score=83.30 Aligned_cols=253 Identities=13% Similarity=0.045 Sum_probs=140.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+++- .|.+. .-..+.+..+|+.+.+... -..+++.. +++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l---~~~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f--~~s 114 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHG--RPEIVEAVRAQAGEL---DYAPAFQMGHPKAFELANRIAEIAP--GGLNHVFF--TNS 114 (442)
T ss_pred CCCEEEECchhHHHhccCCC--CHHHHHHHHHHHHhC---CCcccCCcCCHHHHHHHHHHHHhCC--CCCCEEEE--eCC
Confidence 45677898888776556643 467777777666531 11111 1112334455555543211 11358899 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHH-HhhcC------------CeEEEEecc-cCCC--CCC---
Q psy14428 240 GSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRF-CTDSR------------LNVGAYRYF-DNKT--NGL--- 295 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~-~~~~G------------~~~~~v~~~-d~~~--~g~--- 295 (583)
|++|.+.+..+.+... +...+|+...-+|.+...- +...| ..+..+|.. +... ++.
T Consensus 115 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 194 (442)
T PRK13360 115 GSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQP 194 (442)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChH
Confidence 9999998766555442 1135788888887765321 11111 112223331 0000 111
Q ss_pred -----ChhhHHHHHHcCC-CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 296 -----DFAGMMEDIKAMP-ERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 296 -----d~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
..+.+++.++... ++..++++-.-+--.|.. .+++-+++|.++|+++|+++|.||+...|..-+ ......
T Consensus 195 ~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~~ 271 (442)
T PRK13360 195 EHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---APFAAQ 271 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchhhh
Confidence 1345666665332 334444443333333543 578889999999999999999999998774333 111121
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHh
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l 437 (583)
.+ +-.+. +-+|||.++ .| +-+|.+++ + +++++.+... .....++.++++..++.+.+
T Consensus 272 ~~-gv~PD---ivt~gK~l~-gG~~P~gav~~--~-----~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L 336 (442)
T PRK13360 272 YF-GVTPD---LLTCAKGLT-NGAIPMGAVFV--S-----SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATL 336 (442)
T ss_pred hc-CCCCc---eeeeeeccc-cCccceEEEEE--c-----HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHH
Confidence 11 11122 237899997 56 78999888 6 5777776531 11223445666655555544
No 308
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.45 E-value=4.3e-05 Score=83.65 Aligned_cols=256 Identities=15% Similarity=0.087 Sum_probs=144.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|. -.|.+.+++.+.++.. .. +... .+..+....+++.+..... ....+++.+ +++
T Consensus 87 dG~~ylD~~sg~~~~~lGh--~hp~v~~Av~~ql~~~-~~-~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f--~~S 159 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGG--SEPRLVAAATEQLNKL-PF-YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFF--TNS 159 (504)
T ss_pred CCCEEEEcCcCHHhcccCC--CCHHHHHHHHHHHhhc-cc-eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEE--eCC
Confidence 4667899998887777774 3477778777766541 11 1111 2334555666666544321 112257888 899
Q ss_pred chhHHHHHHHHHHHh----C-CCCCEEEEcCCCChhhHHHH-hhcCCe------------EEEEecccCCCCCC---C--
Q psy14428 240 GSGSLRVGTAFLERF----Y-PGVKTVYFPTPTWNGHVRFC-TDSRLN------------VGAYRYFDNKTNGL---D-- 296 (583)
Q Consensus 240 ~~~al~l~~~~l~~~----~-~~gd~Vlv~~P~y~~~~~~~-~~~G~~------------~~~v~~~d~~~~g~---d-- 296 (583)
|++|.+.+..+.+.. . +..+.|+..+-+|....... ...|.. +..++..+....++ +
T Consensus 160 GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 239 (504)
T PLN02760 160 GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEE 239 (504)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHH
Confidence 999999876555432 1 11357888888887764322 212211 11222100000000 1
Q ss_pred ------hhhHHHHHHcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 297 ------FAGMMEDIKAMP-ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 297 ------~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
.+.+++.+.+.. ....++++-.-+.--|. ..+++-+++|.++|++||+++|.||+.-.|..-+ ......
T Consensus 240 ~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG---~~~a~e 316 (504)
T PLN02760 240 EFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG---TMFGCD 316 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc---hhhHHH
Confidence 134555554322 33444544333333354 3578899999999999999999999998884333 111211
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHhC
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l~ 438 (583)
.+ +-.+. +-+|+|.+| .| +-+|.+++ + +++++.+... .....++.++++..++.+.|+
T Consensus 317 ~~-gv~PD---ivtlgK~lg-gG~~PigAv~~--~-----~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le 382 (504)
T PLN02760 317 KY-NIKPD---LVSLAKALS-SAYMPIGAVLV--S-----PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALK 382 (504)
T ss_pred hc-CCCCc---EEEeccccc-CCccccceEee--c-----HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHH
Confidence 11 11122 567899997 67 48999888 5 4788777531 112244556666666655553
No 309
>PRK05965 hypothetical protein; Provisional
Probab=98.45 E-value=6.4e-05 Score=81.55 Aligned_cols=265 Identities=13% Similarity=0.074 Sum_probs=149.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+++. .+ .... .-..+.+..+|+.+.+... -..+++.. +++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~-~~-~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f--~~s 115 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYG--QESIVEAAAEQMREL-PY-ATGYFHFGSEPAIRLAAKLAERAP--GSLNHVYF--TLG 115 (459)
T ss_pred CCCEEEECcccHHhccCCCC--CHHHHHHHHHHHHhc-CC-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEE--eCC
Confidence 45577898888776666653 367777777766541 11 1110 0112333445555543221 12368899 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHH-hhcCC------------eEEEEecccCC--CCCCCh--
Q psy14428 240 GSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFC-TDSRL------------NVGAYRYFDNK--TNGLDF-- 297 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~d~~--~~g~d~-- 297 (583)
|++|.+.+..+.+... +...+|+..+-+|.+..... ...|. .+..+|..... ..+-|.
T Consensus 116 GSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (459)
T PRK05965 116 GSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQA 195 (459)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHH
Confidence 9999998876655441 21357888888887764211 11110 11222221000 011122
Q ss_pred ------hhHHHHHHcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 298 ------AGMMEDIKAMP-ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 298 ------~~l~~~l~~~~-~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
+.+++.++... +...++++-.-+.-.|. +.+++-+++|.++|++||+++|.||+...|..-+ .......
T Consensus 196 ~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~a~~~ 272 (459)
T PRK05965 196 IIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG---PLFACEA 272 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc---hhhhHhh
Confidence 45666665433 34455555444555565 5688899999999999999999999999885433 1222222
Q ss_pred HHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHh---C
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEIL---S 438 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l---~ 438 (583)
+ +-.+.+++ ++|.++ .| +-+|.+++ . +++++.+..- .....++.++++..++.+.| +
T Consensus 273 ~-gv~PDiv~---~gKgl~-gG~~Pi~av~~--~-----~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~ 340 (459)
T PRK05965 273 E-GVVPDLMT---VAKGLT-SGYVPMGAVLM--S-----DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH 340 (459)
T ss_pred c-CCCCCeEE---echhhc-cCCcceeEEEE--c-----HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 2 22234443 589998 79 49999999 6 5787776531 11224455666665555444 4
Q ss_pred Chhhhhhhhh
Q psy14428 439 DPKLKAQCDE 448 (583)
Q Consensus 439 ~~~~~~~~~~ 448 (583)
++.+..+...
T Consensus 341 ~~~l~~~~~~ 350 (459)
T PRK05965 341 EGGLLANGQK 350 (459)
T ss_pred hccHHHHHHH
Confidence 5444444333
No 310
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.45 E-value=5.2e-05 Score=82.21 Aligned_cols=249 Identities=12% Similarity=0.051 Sum_probs=135.5
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...+|+. |.+....|. -.|.+.+++.+.++.. .+....-..+.+..+++.+....+ -..+++.+ +++++
T Consensus 71 G~~ylD~~-g~~~~~lGh--~~p~v~~Ai~~ql~~~---~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f--~~sGs 140 (459)
T PRK06082 71 GKKYMDFH-GNNVHQLGY--GHPHVIEKVKEQMAKL---PFSPRRFTNETAIECAEKLTEIAG--GELNRVLF--APGGT 140 (459)
T ss_pred CCEEEEcc-cHhhcccCC--CCHHHHHHHHHHHHhC---CCccCccCCHHHHHHHHHHHHhCC--CCCCEEEE--CCCcH
Confidence 44567775 434434453 2366777776666531 111111112344455555543321 11368999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH-HHhhcCC------------eEEEEecccCCC--CC-CC------hhh
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR-FCTDSRL------------NVGAYRYFDNKT--NG-LD------FAG 299 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~-~~~~~G~------------~~~~v~~~d~~~--~g-~d------~~~ 299 (583)
+|.+.+..+.+.... ..+|+...-+|..... .+...|. .+..+|..+... +. .+ ++.
T Consensus 141 eAve~AlklAr~~tg-r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (459)
T PRK06082 141 SAIGMALKLARHITG-NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADY 219 (459)
T ss_pred HHHHHHHHHHHHhcC-CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHH
Confidence 999988666555533 4678888888776532 2222221 122232210000 00 01 234
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 300 MMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 300 l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
+++.+++. ....++++-.-++--+...+++-+++|.++|++||+++|.||+...|...+ .......+ +-.+.+++
T Consensus 220 l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~fa~e~~-gv~PDiv~ 294 (459)
T PRK06082 220 LEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG---EWFTHQAY-GIEPDILC 294 (459)
T ss_pred HHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHhHhh-CCCCCEEE
Confidence 55655432 344455543334433456788899999999999999999999998874433 11122222 22233443
Q ss_pred EecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 380 AQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 380 i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
|+|.++ .| +-+|.+++ . +++.+..........++.++++..++.+.+
T Consensus 295 ---~gKgl~-gG~~P~~av~~--~-----~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L 342 (459)
T PRK06082 295 ---IGKGLG-GGLVPIAAMIT--K-----DKYNTAAQISLGHYTHEKSPLGCAAALATI 342 (459)
T ss_pred ---eccccc-CCCCcceEEEE--c-----HHHHhhccCCCCCCCCCcCHHHHHHHHHHH
Confidence 899998 67 58999998 5 345433321111134456666665555544
No 311
>PRK07482 hypothetical protein; Provisional
Probab=98.45 E-value=5.7e-05 Score=81.96 Aligned_cols=254 Identities=15% Similarity=0.096 Sum_probs=145.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCC-C-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYAN-I-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .+.+.+++.+.++.. .|.. . .-..+.+..+|+.+.+.. +-.-+++.+ ++
T Consensus 48 dG~~ylD~~sg~~~~~lGh~--~p~v~~Av~~q~~~~---~~~~~~~~~~~~~~~~lAe~L~~~~--p~~~~~v~f--~~ 118 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYG--RTEVAEAIAEQAKEL---AYYHTYVGHGTEASITLSKRIIDRA--PAGMSKVYY--GL 118 (461)
T ss_pred CCCEEEEcccchhhhcCCCC--CHHHHHHHHHHHHhc---CccccccccCCHHHHHHHHHHHHhC--CCCcCEEEE--eC
Confidence 45677999988887766653 467777777766542 1111 1 112344555666654422 112368999 99
Q ss_pred CchhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhh-cC------------CeEEEEecccCCC---CCC--
Q psy14428 239 SGSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTD-SR------------LNVGAYRYFDNKT---NGL-- 295 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~d~~~---~g~-- 295 (583)
+|++|.+.+..+.+... ....+|+...-+|.+....... .| ..+..++...... .+.
T Consensus 119 sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 198 (461)
T PRK07482 119 SGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSE 198 (461)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCH
Confidence 99999998766654331 1135788888888775321111 11 0112222100000 010
Q ss_pred ------ChhhHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHH
Q psy14428 296 ------DFAGMMEDIKAM-PERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSL 367 (583)
Q Consensus 296 ------d~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~ 367 (583)
+++.+++.+.+. .+...++++-.-+.-.|.. .+++-+++|.++|++||+++|.||+...|..-+ .....
T Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~ 275 (461)
T PRK07482 199 EQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG---SMFGS 275 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---chhhH
Confidence 245566666432 2344555543334444655 578899999999999999999999999884333 11122
Q ss_pred HHHHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHhC
Q psy14428 368 RYFAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 368 ~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l~ 438 (583)
..+ +-.+.+++ ++|.++ .|+ -+|.+++ . +++.+.+... .....++.++++..++.+.++
T Consensus 276 ~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~~--~-----~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 342 (461)
T PRK07482 276 DHY-GIEPDLIT---VAKGLT-SAYAPLSGSIV--G-----EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLD 342 (461)
T ss_pred Hhc-CCCCCEEE---Eccccc-cCccccceeee--c-----HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHH
Confidence 222 22334444 589997 785 8999888 5 4677766521 111244567777666665553
No 312
>PLN02263 serine decarboxylase
Probab=98.44 E-value=2e-05 Score=84.21 Aligned_cols=235 Identities=13% Similarity=0.009 Sum_probs=151.0
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEe
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 286 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 286 (583)
+..++.+.+.+|+.+..|.+-..-.=.+ |+||++|.-.+....+...+ ...|++++-+.......++.+|++++.||
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~v--tsGGTEaNL~Al~aARe~~~-~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp 206 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYI--TNCGTEGNLHGILVGREVFP-DGILYASRESHYSVFKAARMYRMECVKVD 206 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEE--eCcHHHHHHHHHHHHHhhcC-CcEEEEcCCccHHHHHHHHhcCCcceEec
Confidence 6788999999999877765321223467 99999998776444444433 34788888888888899999999999999
Q ss_pred cccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCe-----EEEEeccCCCCCCCCCC
Q psy14428 287 YFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHL-----YPFFDMAYLGLTSGDFD 361 (583)
Q Consensus 287 ~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i-----~iI~De~Y~~l~~~~~~ 361 (583)
. |+ ++.+|++.|++++.+...++.+++.+-+.-+||.+ |.+++|.++|+++|+ |+-+|-+|+.+...-.
T Consensus 207 ~-d~-~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~- 280 (470)
T PLN02263 207 T-LV-SGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFV- 280 (470)
T ss_pred c-CC-CCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhc-
Confidence 8 54 47899999999997655456667677778888866 456677888888886 9999999988754211
Q ss_pred CchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH---H---hccc--c--CCChHHHH
Q psy14428 362 KDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL---I---RGFY--S--NPPIHGAR 431 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~---~---~~~~--~--~~s~~~q~ 431 (583)
+..+.+ .+.. .--=+.-+.-|.++ .-.-.|.++. .+ ..++.+... . .... + +...+..+
T Consensus 281 ~~~~~~-df~~--~vDSIsvD~HK~l~-~P~~cgvll~--R~-----~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW 349 (470)
T PLN02263 281 KRAPKV-TFKK--PIGSVSVSGHKFVG-CPMPCGVQIT--RM-----EHINVLSSNVEYLASRDATIMGSRNGHAPIFLW 349 (470)
T ss_pred cccccc-CCCc--CccEEEECCccccC-CCcCEEEEEE--eh-----hhHhhhccChHhhCCCCCCcCCCCCcHHHHHHH
Confidence 011011 1110 10113345678775 7778898888 52 233333221 0 0011 1 11245556
Q ss_pred HHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 432 IVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 432 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
++...+....+.+..++..+..+.+.+.++
T Consensus 350 ~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~ 379 (470)
T PLN02263 350 YTLNRKGYRGFQKEVQKCLRNAHYLKDRLR 379 (470)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666677666665555555544443
No 313
>PRK12403 putative aminotransferase; Provisional
Probab=98.42 E-value=8.7e-05 Score=80.52 Aligned_cols=254 Identities=15% Similarity=0.066 Sum_probs=138.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.. .. +... .+..+....+++.+....+ -.-+++++ +++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~--hp~v~~A~~~q~~~~-~~-~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f--~~S 123 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYG--RKDLAAAAARQMEQL-PY-YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIY--TNS 123 (460)
T ss_pred CCCEEEECchhHHhhcCCCC--CHHHHHHHHHHHHhC-CC-eecccccCCHHHHHHHHHHHHhCC--CCcCEEEE--eCC
Confidence 45678999888776667753 377777777766541 11 1111 1233444455555543221 11268899 999
Q ss_pred chhHHHHHHHHHHHh----CCCCC-EEEEcCCCChhhHH-HHhhcCCe-----------EEEEecccC--CCCCCC----
Q psy14428 240 GSGSLRVGTAFLERF----YPGVK-TVYFPTPTWNGHVR-FCTDSRLN-----------VGAYRYFDN--KTNGLD---- 296 (583)
Q Consensus 240 ~~~al~l~~~~l~~~----~~~gd-~Vlv~~P~y~~~~~-~~~~~G~~-----------~~~v~~~d~--~~~g~d---- 296 (583)
|++|.+.+..+.+.. ..+++ .|+...-+|..... .....|.+ +..+|.... ..+++.
T Consensus 124 GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (460)
T PRK12403 124 GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEF 203 (460)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 999999876666544 12233 34454556665422 22222211 222322000 000111
Q ss_pred ----hhhHHHHHHcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH
Q psy14428 297 ----FAGMMEDIKAMP-ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF 370 (583)
Q Consensus 297 ----~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~ 370 (583)
.+.+++.+.+.. +...++++-.-+.--|. ..+++-+++|.++|++||+++|.||+...|.--+ .......+
T Consensus 204 ~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~e~~ 280 (460)
T PRK12403 204 GRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG---EWFAHEHF 280 (460)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhhhhhc
Confidence 234545553322 33344444322333354 4577889999999999999999999998774433 11121221
Q ss_pred HHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHH----hccccCCChHHHHHHHHHh
Q psy14428 371 AKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILI----RGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 371 ~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~----~~~~~~~s~~~q~~~~~~l 437 (583)
+-.+.++ +|+|.++ .|. -+|.+++ . +++++.+.... ....++.++++..++.+.|
T Consensus 281 -gv~PDiv---~~gK~lg-gG~~Piga~v~--~-----~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L 340 (460)
T PRK12403 281 -GFEPDTL---SIAKGLT-SGYVPMGGLVL--S-----KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANL 340 (460)
T ss_pred -CCCCCeE---EEccccc-ccccceEEEEE--C-----HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHH
Confidence 2223344 3899998 785 8999998 5 46777765311 1123445666666555544
No 314
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.41 E-value=9.1e-05 Score=80.42 Aligned_cols=253 Identities=10% Similarity=0.039 Sum_probs=144.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .+.+.+++.+.++.. .|... .-..+.+..+|+.+.... +-..+++.. +++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l---~~~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f--~~s 115 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHA--NPRINQRIKDQVDQL---EHVILAGFSHEPVIELSERLVKIT--PPGLSRCFY--ADN 115 (466)
T ss_pred CCCEEEEcchhHHhhcCCCC--CHHHHHHHHHHHHhc---CCccccccCCHHHHHHHHHHHHhC--CCCcCEEEE--eCC
Confidence 45677899888776666653 367777777666541 11111 111244455555554321 112358999 999
Q ss_pred chhHHHHHHHHHHHh----C-CCCCEEEEcCCCChhhHHHHhh-cCC------------eEEEEecccCC--CCCC----
Q psy14428 240 GSGSLRVGTAFLERF----Y-PGVKTVYFPTPTWNGHVRFCTD-SRL------------NVGAYRYFDNK--TNGL---- 295 (583)
Q Consensus 240 ~~~al~l~~~~l~~~----~-~~gd~Vlv~~P~y~~~~~~~~~-~G~------------~~~~v~~~d~~--~~g~---- 295 (583)
|++|.+.+..+.+.. . ....+|+...-+|......... .|. .+..+|..+.. ..+.
T Consensus 116 GsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~ 195 (466)
T PRK07030 116 GSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEE 195 (466)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHH
Confidence 999999876555443 1 2235788888888765322221 111 12223321100 0111
Q ss_pred ----ChhhHHHHHHcCCCCcEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 296 ----DFAGMMEDIKAMPERSILFLQTSS--HNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 296 ----d~~~l~~~l~~~~~~~~~i~i~~p--~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
+++.+++.+.+...+..++++ -| +.-.|. ..+++-+++|.++|+++|+++|.||+...|..-+ ......
T Consensus 196 ~~~~~l~~le~~~~~~~~~iAAvi~-EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG---~~~a~~ 271 (466)
T PRK07030 196 HSRRMFAHMEQTLAEHHDEIAAVIV-EPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG---TMFACE 271 (466)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEE-ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc---cchHHH
Confidence 134456666543344444444 44 444455 5677899999999999999999999998885433 122222
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHhC
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l~ 438 (583)
.+ +-.+.+++ |+|.++ .| +-+|.+++ . +++.+.+..- .....++.++++..++.+.++
T Consensus 272 ~~-gv~PDiv~---~gKgl~-gG~~Pi~av~~--~-----~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~ 337 (466)
T PRK07030 272 QA-GIRPDFLC---LSKALT-GGYLPLAAVLT--T-----DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLD 337 (466)
T ss_pred hc-CCCCCEEe---eehhcc-CCcccceEEEe--c-----HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 22 22334444 499998 79 49999999 6 5777776421 112344556777666655543
No 315
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.40 E-value=6.8e-06 Score=88.00 Aligned_cols=202 Identities=14% Similarity=0.035 Sum_probs=128.8
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-----CC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-----YP 256 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-----~~ 256 (583)
+.+.+.+++...+... ..++.......++.+.+.+++.+..|.+-..+++...-|+|+++|..++....+.. ..
T Consensus 53 ~~p~~~~~~~~~l~~~-~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~ 131 (431)
T TIGR01788 53 MEPEARKLMDETINKN-MIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA 131 (431)
T ss_pred CCHHHHHHHHHHHhcC-CCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456777776666432 12222233334666666666665555431113443312799999998763222211 01
Q ss_pred C-----CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH
Q psy14428 257 G-----VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQ 331 (583)
Q Consensus 257 ~-----gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~ 331 (583)
. ...|++.+-........++..|+++..+|+ |++++.+|++.+++.+ .+++.++++.-.+|.||.+-+.++
T Consensus 132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~-d~~~~~vd~~~L~~~i---~~~t~lV~~t~g~t~tG~idpi~~ 207 (431)
T TIGR01788 132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPM-DPGRYVIDPEQVVEAV---DENTIGVVCILGTTYTGEYEDVKA 207 (431)
T ss_pred cCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEec-CCCceeeCHHHHHHHH---hhCCeEEEEEeCCCCCcccCCHHH
Confidence 1 136888888888888888889999999999 6533468999999998 456789999999999999988555
Q ss_pred HHHHHHHHHhc------CeEEEEeccCCCCC----CCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 332 WRQLAVVVKQR------HLYPFFDMAYLGLT----SGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 332 ~~~l~~~a~~~------~i~iI~De~Y~~l~----~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|.++|+++ ++++.+|-+|+.+. .+. .... + ...+---..-|.-|.+ +.-.-+|.+++
T Consensus 208 ---I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~---~~~~---~-~~~~~DSis~s~HK~~-~~P~g~G~l~~ 274 (431)
T TIGR01788 208 ---LNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD---LEWD---F-RLPRVKSINVSGHKYG-LVYPGVGWVIW 274 (431)
T ss_pred ---HHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC---chhh---c-CCCCceEEEECchhcc-CCCCCcEEEEE
Confidence 56777788 89999999998543 111 0101 1 1111223566788965 13344799998
No 316
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.40 E-value=3.9e-05 Score=82.53 Aligned_cols=252 Identities=8% Similarity=0.027 Sum_probs=138.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC--CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL--DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|. -.+.+.+++.+.++... ...+.......+|-+.+++... -.-+++.. ++
T Consensus 43 dG~~ylD~~~g~~~~~lGh--~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~------~~~~~v~f--~~ 112 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGY--NHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTP------NALDCVFL--AD 112 (427)
T ss_pred CCCEEEEccchHHHhcCCC--CCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCC------CCCCEEEE--eC
Confidence 3456788888776555563 34677777776665411 1111122223444444444321 11268888 99
Q ss_pred CchhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhh-cCCe-------------EEEEecccCCCCC-----
Q psy14428 239 SGSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTD-SRLN-------------VGAYRYFDNKTNG----- 294 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~-~G~~-------------~~~v~~~d~~~~g----- 294 (583)
+|++|.+.+..+.+... +...+|+..+-+|......+.. .|.. ...++.. ...+.
T Consensus 113 sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~ 191 (427)
T TIGR00508 113 SGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNE 191 (427)
T ss_pred CcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHH
Confidence 99999988755544331 1135788888888765322221 1210 1112110 00011
Q ss_pred CChhhHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH
Q psy14428 295 LDFAGMMEDIKAMPERSILFLQTS-SHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK 372 (583)
Q Consensus 295 ~d~~~l~~~l~~~~~~~~~i~i~~-p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~ 372 (583)
-|++.+++.+.+...+..++++-. .++--|. ..+.+.+++|.++|+++++++|.||++.++...+ .......+ +
T Consensus 192 ~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G---~~~~~~~~-~ 267 (427)
T TIGR00508 192 EAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG---KLFACEHA-G 267 (427)
T ss_pred HHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---ccchhhhc-C
Confidence 134566666654333444444432 2555454 5579999999999999999999999997775443 11112111 2
Q ss_pred hcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHH-----hccccCCChHHHHHHHHHhC
Q psy14428 373 EVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILI-----RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 373 ~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~-----~~~~~~~s~~~q~~~~~~l~ 438 (583)
....++ ++||.++ .|+ -++.+++ . +++++.+.... ....+..++++..++.+.++
T Consensus 268 v~pDi~---~~gK~l~-gG~~p~~a~~~--~-----~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~ 328 (427)
T TIGR00508 268 VVPDIL---CVGKALT-GGYMTLSATVT--T-----DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLA 328 (427)
T ss_pred CCCCEE---Eechhhh-cCcccceEEEE--c-----HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 222333 3799996 785 5777777 5 57777776321 11223346666665555543
No 317
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.40 E-value=4.4e-06 Score=86.98 Aligned_cols=254 Identities=14% Similarity=0.083 Sum_probs=143.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCC-CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYAN-IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+..... .|.. ..-..+.+.++++.+.+..+. ..+++.+ +++
T Consensus 14 dG~~~lD~~~~~~~~~lGh~--~p~i~~ai~~~~~~~---~~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f--~~s 84 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHN--HPEIAEAIAEQANKL---NYVSFSGFTHPEAAELAEKLAELFPG--GLDRVFF--ANS 84 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT---HHHHHHHHHHHHHC---SSCSTTTSEEHHHHHHHHHHHHHSST--TEEEEEE--ESS
T ss_pred CCCEEEECCCCccceecCCC--ccccchhHHHHhhhc---ccccccceeccchhhhhhhhhhcccc--ccceeee--ccC
Confidence 34567888877776666643 467777777766542 2222 333345566666666543311 3468999 999
Q ss_pred chhHHHHHHHHHHH-----hCCCCCEEEEcCCCChhhHHHHhh-------------cCCeEEEEecccCCC---CCCChh
Q psy14428 240 GSGSLRVGTAFLER-----FYPGVKTVYFPTPTWNGHVRFCTD-------------SRLNVGAYRYFDNKT---NGLDFA 298 (583)
Q Consensus 240 ~~~al~l~~~~l~~-----~~~~gd~Vlv~~P~y~~~~~~~~~-------------~G~~~~~v~~~d~~~---~g~d~~ 298 (583)
|++|++.+..+.+. ..+.-..|+...-+|......... ....+..+|..+... ..-...
T Consensus 85 GseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 164 (339)
T PF00202_consen 85 GSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLN 164 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHH
Confidence 99999998666550 122246888888888754321111 112345566521100 000011
Q ss_pred hHHHHHHcC-CCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCc
Q psy14428 299 GMMEDIKAM-PERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQ 376 (583)
Q Consensus 299 ~l~~~l~~~-~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 376 (583)
.+++.+.+. .+...++++-.-+--.|. ..+++-+++|.++|+++|+++|.||+...|..-+ .......+ +..+.
T Consensus 165 ~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG---~~~a~~~~-gv~PD 240 (339)
T PF00202_consen 165 ALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTG---KFFASEHY-GVDPD 240 (339)
T ss_dssp HHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTS---SSSGHHHH-TSSSS
T ss_pred HHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccC---Cccceecc-cccCc
Confidence 122222222 233334443222333454 4567788999999999999999999999995544 12223332 33445
Q ss_pred EEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 377 LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 377 vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++++ +|.++ .|+-+|.+++ . +++.+.+........++.++++..++.+.|+
T Consensus 241 iv~~---gK~l~-gG~p~sav~~--~-----~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~ 291 (339)
T PF00202_consen 241 IVTF---GKGLG-GGLPISAVLG--S-----EEIMEAFQPGSHGSTFGGNPLSCAAALATLE 291 (339)
T ss_dssp EEEE---EGGGG-TTSSEEEEEE--E-----HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred cccc---ccchh-hhhhcccccc--c-----chhhccccccccccccccchHhhhhhhhHHH
Confidence 5544 69998 7899999999 5 5677766444333455566777776666554
No 318
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.37 E-value=7.3e-05 Score=80.75 Aligned_cols=253 Identities=13% Similarity=0.031 Sum_probs=139.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCC-CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIG-GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~-G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.- .|.+.. -..+....+|+.+.+... -..+++.. +++
T Consensus 47 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l---~~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f--~~s 117 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHG--RPEIVEAVARQAATL---DYAPAFQMGHPLAFELAERLAELAP--GGLDHVFF--TNS 117 (445)
T ss_pred CCCEEEEccccHhhccCCCC--CHHHHHHHHHHHHhc---cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCC
Confidence 45577899888776666643 467777776666531 111111 112333445555543221 11368999 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhh-cC------------CeEEEEeccc-CC--CCCC---
Q psy14428 240 GSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTD-SR------------LNVGAYRYFD-NK--TNGL--- 295 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~d-~~--~~g~--- 295 (583)
|++|.+.+..+.+... +...+|+...-+|.+.....-. .| ..+..+|... .. .++.
T Consensus 118 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK09221 118 GSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQP 197 (445)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChH
Confidence 9999998766555442 1135788888787665321111 11 1122233210 00 0111
Q ss_pred -----ChhhHHHHHHcCC-CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 296 -----DFAGMMEDIKAMP-ERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 296 -----d~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
..+.+++.++... ++..++++-.-+.-.|.. .+++-+++|.++|+++|+++|.||+...|..-+ ......
T Consensus 198 ~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~~~~ 274 (445)
T PRK09221 198 EHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---AAFAAE 274 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc---hhhHHH
Confidence 1245566665432 344455544344444653 467789999999999999999999998774333 111222
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHh
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l 437 (583)
.+ +-.+. +-++||.++ .| +-+|.+++ + +++++.+..- .....++.++++..++.+.+
T Consensus 275 ~~-gv~PD---i~~~gK~l~-gG~~Pi~av~~--~-----~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L 339 (445)
T PRK09221 275 RF-GVTPD---IITFAKGLT-NGAIPMGAVIA--S-----DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATL 339 (445)
T ss_pred hc-CCCCC---EEEeccccc-cCcccceeeEE--c-----HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHH
Confidence 21 11122 347899997 56 67999888 5 4777776431 11223445666655555444
No 319
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.37 E-value=6e-05 Score=80.96 Aligned_cols=251 Identities=11% Similarity=0.026 Sum_probs=139.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLD--HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+.+... ..+.......+|-+.+++.. +-..+++.+ ++
T Consensus 42 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~------p~~~~~v~f--~~ 111 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYN--HPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEIL------PPSLNKIFF--AD 111 (429)
T ss_pred CCCEEEEccchHHhccCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhC------CCCcCEEEE--eC
Confidence 45667888888766665643 36777777666654111 11112222233444444332 112368999 99
Q ss_pred CchhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHH-HHhhcCC-------------eEEEEecccCCCCC-----
Q psy14428 239 SGSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVR-FCTDSRL-------------NVGAYRYFDNKTNG----- 294 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~-~~~~~G~-------------~~~~v~~~d~~~~g----- 294 (583)
+|++|.+.+..+.+... +...+|+...-+|.+... .+...|. .+..+|..+. .++
T Consensus 112 sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~ 190 (429)
T PRK06173 112 SGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWND 190 (429)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHH
Confidence 99999998766555441 223578888888876421 1111110 1122322100 011
Q ss_pred CChhhHHHHHHcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH
Q psy14428 295 LDFAGMMEDIKAMPERSILFLQTSS-HNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK 372 (583)
Q Consensus 295 ~d~~~l~~~l~~~~~~~~~i~i~~p-~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~ 372 (583)
-+++.+++.++....+..++++--- +.-.|.. .+++-+++|.++|++||+++|.||+...|...+ .......+ +
T Consensus 191 ~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~~~~-g 266 (429)
T PRK06173 191 EAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG---KLFALEHA-G 266 (429)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC---cchHHHhc-C
Confidence 0245566666543344555554431 5555655 789999999999999999999999997764333 11112221 2
Q ss_pred hcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHH-----HhccccCCChHHHHHHHHHh
Q psy14428 373 EVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKIL-----IRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 373 ~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~-----~~~~~~~~s~~~q~~~~~~l 437 (583)
-.+.++ +|+|.++ .|+ -+|.+++ . +++++.+..- .-...++.++++..++.+.+
T Consensus 267 v~PDiv---~~gK~l~-gG~~p~~a~~~--~-----~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l 326 (429)
T PRK06173 267 VVPDIM---CIGKALT-GGYLTLSATIT--T-----EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESI 326 (429)
T ss_pred CCCCEE---Eeehhhh-CCccccceEEe--c-----HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHH
Confidence 122333 3899997 784 6888887 5 4777776421 11112344566665555544
No 320
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.36 E-value=0.00014 Score=79.00 Aligned_cols=253 Identities=11% Similarity=0.071 Sum_probs=142.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCC-CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGG-DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G-~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.- .+....+ ..+.+..+|+.+..... -..+++.. +++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l---~~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f--~~S 124 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQ--VPELDEAIREQLNKI---AHSTLLGLANVPSILLAEKLIEVVP--EGLKKVFY--SDS 124 (460)
T ss_pred CCCEEEEcchhHHHhhcCCC--CHHHHHHHHHHHHhC---CCccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCC
Confidence 45667888877765555543 467777776666541 1111101 12233445555443221 11258889 999
Q ss_pred chhHHHHHHHHHHHh-----CCCCCEEEEcCCCChhhHHHHhh-cCC------------eEEEEecccCC--CCC-----
Q psy14428 240 GSGSLRVGTAFLERF-----YPGVKTVYFPTPTWNGHVRFCTD-SRL------------NVGAYRYFDNK--TNG----- 294 (583)
Q Consensus 240 ~~~al~l~~~~l~~~-----~~~gd~Vlv~~P~y~~~~~~~~~-~G~------------~~~~v~~~d~~--~~g----- 294 (583)
|++|.+.+..+.+.. ..+..+|+...-+|.+....... .|. .+..+|..+.. ..+
T Consensus 125 GseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~ 204 (460)
T PRK06916 125 GATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAE 204 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHH
Confidence 999999876655543 12246788888888775322211 111 12223321000 001
Q ss_pred ---CChhhHHHHHHcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 295 ---LDFAGMMEDIKAMPERSILFLQTS-SHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 295 ---~d~~~l~~~l~~~~~~~~~i~i~~-p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
-+++.+++.++....+..++++-. .+.-.|.. .+++-+++|.++|+++|+++|.||+.-.|...+ .......
T Consensus 205 ~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG---~~~a~~~ 281 (460)
T PRK06916 205 IVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG---KMFACEH 281 (460)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc---hhhHHHh
Confidence 124455666654334444444432 25555654 589999999999999999999999998874333 1212222
Q ss_pred HHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHh
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l 437 (583)
+ +-.+.++ +++|.++ .| +-+|.+++ . +++++.+..- .....++.++++..++...+
T Consensus 282 ~-gv~PDiv---~~gK~l~-gG~~Pi~av~~--~-----~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l 345 (460)
T PRK06916 282 E-NVTPDIM---TAGKGLT-GGYLPIAITVT--T-----DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANL 345 (460)
T ss_pred c-CCCCCee---eeehhhh-cCccccceeee--c-----HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHH
Confidence 1 2223343 5699998 78 58999999 6 4677766421 11223445666666555554
No 321
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.36 E-value=0.0001 Score=77.45 Aligned_cols=229 Identities=13% Similarity=0.093 Sum_probs=136.0
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCC-CCCE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYP-GVKT 260 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~-~gd~ 260 (583)
|.+...+++.. . .-.|..+.....|.+.+++.++..+ ++. |..+.++-.++ +..+++ +||+
T Consensus 55 pS~~m~aAM~~--G---DD~Y~gdpSv~~Lee~vael~G~E~--------alp--thqGRgaE~Il---~~~~~~~~g~e 116 (467)
T TIGR02617 55 VTQSMQAAMMR--G---DEAYSGSRSYYALAESVKNIFGYQY--------TIP--THQGRGAEQIY---IPVLIKKREQE 116 (467)
T ss_pred CCHHHHHHHHc--C---CcccccCchHHHHHHHHHHHhCCce--------EEE--CCCCchHHHHH---HHhhccccccc
Confidence 34566666553 1 3458888888999999999998653 455 77777777664 444554 6888
Q ss_pred EEEcCC-----C---ChhhHHHHhhcCCeEEEEecc--------cCCCCCCChhhHHHHHHcCC-CCcEEEEeCCCCCCC
Q psy14428 261 VYFPTP-----T---WNGHVRFCTDSRLNVGAYRYF--------DNKTNGLDFAGMMEDIKAMP-ERSILFLQTSSHNPT 323 (583)
Q Consensus 261 Vlv~~P-----~---y~~~~~~~~~~G~~~~~v~~~--------d~~~~g~d~~~l~~~l~~~~-~~~~~i~i~~p~NPT 323 (583)
+.+..+ . |......+...|+.++.++.. .+....+|++.+++.++... .+.-.+.+.--||-.
T Consensus 117 ~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~ 196 (467)
T TIGR02617 117 KGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSA 196 (467)
T ss_pred ccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecC
Confidence 876554 2 333345677889888776431 11235789999999997532 111111111112433
Q ss_pred -CCCCCHHHHHHHHHHHHhcCeEEEEeccCC----------CCCCCCCCCchHHHHHHH----HhcCcEEEEecCccccc
Q psy14428 324 -GVDLSEDQWRQLAVVVKQRHLYPFFDMAYL----------GLTSGDFDKDAFSLRYFA----KEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 324 -G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~----------~l~~~~~~~~~~~~~~~~----~~~~~vi~i~S~SK~~~ 388 (583)
|.++|.+.++++.++|++||+.++.|-+-. +-.+.+ .+++.+. +..| .+.-|+||.++
T Consensus 197 GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~-----~si~eI~rE~~~~aD--svt~slsKglg 269 (467)
T TIGR02617 197 GGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKN-----WSIEQITRETYKYAD--MLAMSAKKDAM 269 (467)
T ss_pred CCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcC-----CCHHHHHHHhhccCC--EEEEEcCCCCC
Confidence 679999999999999999999999997521 112222 1333322 2222 45668999775
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHH-----hccccCCChHHHHHHHHHhCCh
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILI-----RGFYSNPPIHGARIVTEILSDP 440 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~-----~~~~~~~s~~~q~~~~~~l~~~ 440 (583)
. .+|-+++. ++ +...++.++++... -.++.+.+.--..+++.-|.+.
T Consensus 270 A---pvGg~Lag-~d-~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~ 321 (467)
T TIGR02617 270 V---PMGGLLCF-KD-DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG 321 (467)
T ss_pred C---cccceEEe-cc-hhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhc
Confidence 4 45544441 43 20004444444321 1223455666667776656543
No 322
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.35 E-value=4.2e-05 Score=77.36 Aligned_cols=182 Identities=16% Similarity=0.162 Sum_probs=111.6
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcC-CCChhhHHHH--------
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHVRFC-------- 275 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~-P~y~~~~~~~-------- 275 (583)
..|-..|.+..|+.++.+... + .-+ -..||+||.++ |..++.|||+.+..+ .-|.....++
T Consensus 53 D~GRd~le~iyA~vfgaE~AL-V-Rpq-----~vSGTHAi~~~---Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~G 122 (403)
T PF06838_consen 53 DIGRDKLERIYADVFGAEDAL-V-RPQ-----FVSGTHAIALA---LFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPG 122 (403)
T ss_dssp -HHHHHHHHHHHHHCT-SEEE-E-ETT-----S-SHHHHHHHH---HHHH--TT-EEEESSSS--CCHHHHHTSSSSSSS
T ss_pred CccHHHHHHHHHHHhCchhhh-h-ccc-----ccchHHHHHHH---HHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCC
Confidence 346666666666666543210 1 113 33488999885 445566699988543 3477666665
Q ss_pred --hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEe-CCCCCCCCCCCCHHHHHHHHHHHHh--cCeEEEEec
Q psy14428 276 --TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQ-TSSHNPTGVDLSEDQWRQLAVVVKQ--RHLYPFFDM 350 (583)
Q Consensus 276 --~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i-~~p~NPTG~~~s~~~~~~l~~~a~~--~~i~iI~De 350 (583)
+..|++...+|+. + +..+|++.++++++ ++++++++ =+..--+=..++.++++++++++++ .++++++|.
T Consensus 123 SL~e~Gi~Y~~v~L~-~-dg~~D~~~i~~~~~---~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDN 197 (403)
T PF06838_consen 123 SLKEFGIKYREVPLT-E-DGTIDWEAIKKALK---PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDN 197 (403)
T ss_dssp STGGGT-EEEE--B--T-TSSB-HHHHHHHHH---TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-
T ss_pred ChHHhCceeEEEeec-C-CCCcCHHHHHHhhc---cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 5567889999994 3 47899999999994 56666665 3444444456899999999999986 589999999
Q ss_pred cCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc--ceEEEEEcCCchhHHHHHHHHHHHHh
Q psy14428 351 AYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER--VGTFSVLTPTSDETERIMSQLKILIR 419 (583)
Q Consensus 351 ~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR--iG~lv~~~p~~~~~~~li~~l~~~~~ 419 (583)
+|++|+-.. .+. .-+--+..+|+=|+-| -|+= -||+++ . ++++++......
T Consensus 198 CYGEFvE~~---EP~-------~vGADl~aGSLIKNpG-GgiAptGGYIaG--r-----~~lVe~~a~RLT 250 (403)
T PF06838_consen 198 CYGEFVETQ---EPT-------EVGADLMAGSLIKNPG-GGIAPTGGYIAG--R-----KDLVERAAYRLT 250 (403)
T ss_dssp TTTTTTSSS----GG-------GGT-SEEEEETTSGGG-TTT-SS-EEEEE--S-----HHHHHHHHHHHS
T ss_pred Ccceecccc---Ccc-------ccchhheeccceeCCC-CCccCcCCEEec--h-----HHHHHHHHhhhc
Confidence 999998653 121 2244588999999987 5542 379999 6 689998886543
No 323
>PRK06105 aminotransferase; Provisional
Probab=98.34 E-value=0.0001 Score=80.02 Aligned_cols=265 Identities=14% Similarity=0.099 Sum_probs=146.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+++.. .... .....+.+..+++.+.+... -.-+++.+ +++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f--~~S 117 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFS--EQRLVEAAARQMKKLPFYHTF--SHKSHGPVIDLAEKLVAMAP--VPMSKVFF--TNS 117 (460)
T ss_pred CCCEEEEcchhHHhccCCCC--CHHHHHHHHHHHHhCCCeecc--cccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCC
Confidence 45678999888776666653 4677777777665411 0111 11123344445555543321 12368898 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHH-hhcCC------------eEEEEecccCCCCC-------
Q psy14428 240 GSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFC-TDSRL------------NVGAYRYFDNKTNG------- 294 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~d~~~~g------- 294 (583)
|++|.+.+..+.+... ....+|+...-+|....... ...|. .+..+|..+....+
T Consensus 118 GseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 197 (460)
T PRK06105 118 GSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEE 197 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChH
Confidence 9999998765543321 11357787777776653221 11111 11222221100000
Q ss_pred ----CChhhHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 295 ----LDFAGMMEDIKAM-PERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 295 ----~d~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
...+.+++.+... ..+..++++-.-+.--|.. .+++-+++|.++|++||+++|.||+...|..-+ ......
T Consensus 198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG---~~f~~~ 274 (460)
T PRK06105 198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG---NMFGCE 274 (460)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc---hhhhHH
Confidence 0124556666432 2344455543334444554 588999999999999999999999998874333 121222
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHH-------hccccCCChHHHHHHHHH---h
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILI-------RGFYSNPPIHGARIVTEI---L 437 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~-------~~~~~~~s~~~q~~~~~~---l 437 (583)
.+ +-.+. +-+|||.++ .| +-+|.+++ + +++++.+.... ....++.++++..++.+. +
T Consensus 275 ~~-~v~PD---i~~~gK~lg-gG~~P~~av~~--~-----~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i 342 (460)
T PRK06105 275 TF-GIKPD---ILVMSKQLS-SSYQPLSAVLM--N-----EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAII 342 (460)
T ss_pred hc-CCCCC---eeeeecccc-cCcccceEEEE--c-----HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHH
Confidence 21 21222 347799998 66 58999999 6 57777765321 122445666666655444 4
Q ss_pred CChhhhhhhhh
Q psy14428 438 SDPKLKAQCDE 448 (583)
Q Consensus 438 ~~~~~~~~~~~ 448 (583)
+++.+.++.++
T Consensus 343 ~~~~l~~~v~~ 353 (460)
T PRK06105 343 EERDLVGNAAE 353 (460)
T ss_pred HhccHHHHHHH
Confidence 44444444433
No 324
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.34 E-value=7.3e-05 Score=78.18 Aligned_cols=237 Identities=12% Similarity=0.064 Sum_probs=135.1
Q ss_pred ChHHHHHHHHHhcc---CCCCCCCCCCCCH---HHHHHHHHHHhCCCCCCCCCCCeEEEecCC-chhHHHHHHHHHHHhC
Q psy14428 183 LPSVKEAERRIYEK---NLDHEYANIGGDA---KFCKLAAQLAYGEDFPAFKDNRLAIVQGIS-GSGSLRVGTAFLERFY 255 (583)
Q Consensus 183 ~~~v~~a~~~~~~~---~~~~~Y~~~~G~~---~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G-~~~al~l~~~~l~~~~ 255 (583)
|..+.+++.+...+ .....|....-.+ ++-+.+.+.++.-.+. -+.++|++ ++| +++|++.+ +..+.
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~-~~~~~v~~--~~gsgT~a~ea~---~~nl~ 77 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNI-PDNYEVLF--LQGGATGQFAAV---PLNLL 77 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCC-CCCceEEE--EcCCchHHHHHH---HHhcC
Confidence 35566665555542 1122233333344 3323333333333332 12346888 777 99999985 44455
Q ss_pred CCCCEEEEcCCC-Chh-hHHHHhhcCCeEEEEecccCC---CCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q psy14428 256 PGVKTVYFPTPT-WNG-HVRFCTDSRLNVGAYRYFDNK---TNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330 (583)
Q Consensus 256 ~~gd~Vlv~~P~-y~~-~~~~~~~~G~~~~~v~~~d~~---~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~ 330 (583)
++||+|++..-+ |.. +..+++..|+ +..+.. ++. ...++++.++. .++.+++.++...|.||+..+
T Consensus 78 ~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~v~~th~ETstGv~~~-- 148 (349)
T TIGR01364 78 AEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVAS-GKEGNYTKIPDPSTWEI-----SEDAAYVHYCANETIHGVEFR-- 148 (349)
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEec-cccCCCCCCCCHHhcCC-----CCCCCEEEEcCCCCcccEecc--
Confidence 568988877655 332 3567788898 766665 221 12344443321 357889999999999999765
Q ss_pred HHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHH
Q psy14428 331 QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERI 410 (583)
Q Consensus 331 ~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~l 410 (583)
++++.+++++|+|-+-.--... ..+. ..+ +++.|.-|.+|.|| +|.+++ + +++
T Consensus 149 ------~l~~~~~~l~iVDavss~g~~~------id~~----~~d--~~~~ssqK~lgP~G--lg~l~~--s-----~~~ 201 (349)
T TIGR01364 149 ------ELPDVKNAPLVADMSSNILSRP------IDVS----KFG--LIYAGAQKNIGPAG--LTVVIV--R-----KDL 201 (349)
T ss_pred ------eecccCCCeEEEEccccccCcc------CCHH----Hcc--EEEEecccccCCCc--eEEEEE--C-----HHH
Confidence 4566689999999985433221 1122 223 88888899999787 699988 6 466
Q ss_pred HHHHHHH----------H--hccccCCChHHHHHHHHHhC---Ch-hhhhhhhhHHHHHHHHHHHHh
Q psy14428 411 MSQLKIL----------I--RGFYSNPPIHGARIVTEILS---DP-KLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 411 i~~l~~~----------~--~~~~~~~s~~~q~~~~~~l~---~~-~~~~~~~~~~~~~~~l~~~~r 461 (583)
++++... . .....+++...-.++.+.++ +. .++...++.++..+.+.+.++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~ 268 (349)
T TIGR01364 202 LGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTID 268 (349)
T ss_pred HhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 6554221 1 12223445544444444433 33 466655555555555544443
No 325
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.33 E-value=0.00018 Score=78.13 Aligned_cols=264 Identities=9% Similarity=0.013 Sum_probs=149.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCC--CCCCCCCCCHHHHHHHHHHHhCCCCCC---CCCCCeEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLD--HEYANIGGDAKFCKLAAQLAYGEDFPA---FKDNRLAI 234 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~---~~~~~I~i 234 (583)
.+...+|+..|.+....|.- .+.+.+++.+.++. ... ..+. .+.+..+++.+....... -.-+++..
T Consensus 62 dG~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~l~~~~~~~~~-----~~~~~~lae~L~~~~p~~~~~~~~~~v~f 134 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHA--EPRIGAAIAAQAGELEQVMLAGFT-----HEPAVQLAEQLLAIAPRQDGRAPLSKVFY 134 (472)
T ss_pred CCCEEEEcCccHHhccCCCC--CHHHHHHHHHHHHhCCCccccccC-----CHHHHHHHHHHHHhCCCcccCCCCCEEEE
Confidence 45678999888877666653 36777777666543 101 1121 233455555554322110 12358999
Q ss_pred EecCCchhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhhc-CC------------eEEEEecccCC--CCC
Q psy14428 235 VQGISGSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTDS-RL------------NVGAYRYFDNK--TNG 294 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~-G~------------~~~~v~~~d~~--~~g 294 (583)
+++|++|.+.+..+.+... ....+|+...-+|.+........ |. .+..+|..+.. ..+
T Consensus 135 --~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~ 212 (472)
T PRK08742 135 --ADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPG 212 (472)
T ss_pred --eCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccC
Confidence 9999999998866655542 21357888888877654322221 11 12223321110 011
Q ss_pred C--------ChhhHHHHHHcCCCCcEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 295 L--------DFAGMMEDIKAMPERSILFLQTSS--HNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 295 ~--------d~~~l~~~l~~~~~~~~~i~i~~p--~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
. +++.+++.++.......++++ -| +.-.|. ..+++-++++.++|+++|+++|.||+.-.|..-+ .
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~-EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG---~ 288 (472)
T PRK08742 213 QSAEDYALQAADALQALFEQSPGEICALIL-EPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTG---T 288 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCceEEEEE-ccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---c
Confidence 1 234555666433344444444 44 555565 5688999999999999999999999998886543 1
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHH------HhccccCCChHHHHHHHHH
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKIL------IRGFYSNPPIHGARIVTEI 436 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~------~~~~~~~~s~~~q~~~~~~ 436 (583)
......+ +-.+.+++ ++|.++ .|+ -+|.+++ . +++++.+... .....++.++++..++.+.
T Consensus 289 ~~a~e~~-gv~PDiv~---~gKgl~-gG~~Plaav~~--~-----~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~ 356 (472)
T PRK08742 289 LFACEQA-GVMPDLLC---LSKGLT-GGFLPLSAVLA--T-----QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALAT 356 (472)
T ss_pred chHHHhc-CCCCCEEE---Eccccc-CCCCCcceeec--c-----HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHH
Confidence 2222222 22334444 499998 784 8999998 5 5777766421 1122345566666655554
Q ss_pred h---CChhhhhhhhhH
Q psy14428 437 L---SDPKLKAQCDET 449 (583)
Q Consensus 437 l---~~~~~~~~~~~~ 449 (583)
+ +++.+..+..+.
T Consensus 357 L~~i~~~~l~~~~~~~ 372 (472)
T PRK08742 357 LDIFADDDVIARNQPT 372 (472)
T ss_pred HHHHHHCCHHHHHHHH
Confidence 4 344444443333
No 326
>PRK07481 hypothetical protein; Provisional
Probab=98.32 E-value=0.00017 Score=78.05 Aligned_cols=255 Identities=14% Similarity=0.090 Sum_probs=140.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .+.+.+++.+.++.... +... .-..+.+..+|+.+....+ +-..+++.+ +++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f--~~s 112 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHN--REEVKEAIVRQLDELEY--YSTFDGTTHPRAIELSYELIDMFA-PEGMRRVFF--SSG 112 (449)
T ss_pred CCCEEEECchhHHhhcCCCC--CHHHHHHHHHHHHhccc--eecccccCCHHHHHHHHHHHHhcC-CCCCCEEEE--cCc
Confidence 45567888887776666653 36777777766654111 1110 0112344555555544321 112358899 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhhc-C------------CeEEEEecccCC--CCC-CChh
Q psy14428 240 GSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTDS-R------------LNVGAYRYFDNK--TNG-LDFA 298 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~-G------------~~~~~v~~~d~~--~~g-~d~~ 298 (583)
|++|.+.+..+.+... +...+|+...-+|.+...-.... | ..+..++..+.. .++ -|++
T Consensus 113 GsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 192 (449)
T PRK07481 113 GSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPE 192 (449)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHH
Confidence 9999998866665542 11357888887777643211111 1 012222220000 011 1333
Q ss_pred hH--------HHHHHcC-CCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 299 GM--------MEDIKAM-PERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 299 ~l--------~~~l~~~-~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
.+ ++.+... .++..++++-.-+.-.|. ..+++-+++|.++|+++|+++|.||+...|..-+ ......
T Consensus 193 ~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~ 269 (449)
T PRK07481 193 ELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG---SWFGSR 269 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc---hhhHhh
Confidence 32 3333212 234444544333433455 4578889999999999999999999998885433 111122
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHh
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l 437 (583)
.+ +-.+.++ +++|.++ .| +-+|.+++ . +++++.+... .....++.++++..++.+.+
T Consensus 270 ~~-gv~PDiv---~~gKgl~-gG~~Pi~av~~--~-----~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L 334 (449)
T PRK07481 270 GW-GVKPDIM---CLAKGIT-SGYVPLGATMV--N-----ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATL 334 (449)
T ss_pred hc-CCCCCEE---EEeeccc-CCCcCceEEEE--c-----HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHH
Confidence 21 2223344 3499998 78 58999999 6 5777777531 11224455666666555544
No 327
>PRK07036 hypothetical protein; Provisional
Probab=98.30 E-value=0.00026 Score=76.94 Aligned_cols=255 Identities=11% Similarity=0.095 Sum_probs=141.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCC--CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIG--GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~--G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+... .|.... -..+.+..+|+.+.... +-.-+++.+ ++
T Consensus 49 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~---~~~~~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f--~~ 119 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYG--REEMADAIADQARRL---PYYTPFGDMTNAPAAELAAKLAELA--PGDLNHVFL--TT 119 (466)
T ss_pred CCCEEEECcccHHhhcCCCC--CHHHHHHHHHHHHhC---cccccccccCCHHHHHHHHHHHHhC--CCCcCEEEE--eC
Confidence 35567888777766555543 467777776665431 111111 12244555666554322 112358899 99
Q ss_pred CchhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhhc-CC------------eEEEEecccCC--CCCCC--
Q psy14428 239 SGSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTDS-RL------------NVGAYRYFDNK--TNGLD-- 296 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~-G~------------~~~~v~~~d~~--~~g~d-- 296 (583)
+|++|.+.+..+.+... ....+|+...-+|.......... |. .+..+|..+.. ..+..
T Consensus 120 sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 199 (466)
T PRK07036 120 GGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEA 199 (466)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChH
Confidence 99999998766654441 11257888777777654222111 11 12223321110 01211
Q ss_pred ------hhhHHHHHHcC-CCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 297 ------FAGMMEDIKAM-PERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 297 ------~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
.+.+++.+... .+...++++-.-+.-.|. ..+++-+++|.++|++||+++|.||+...|.--+ ......
T Consensus 200 ~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~~ 276 (466)
T PRK07036 200 AFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG---HFFASE 276 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc---hhhhhh
Confidence 12344444332 234444444333444455 4578899999999999999999999998884332 111222
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHhC
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l~ 438 (583)
...+-.+.+ -+++|.++ .| +-+|.+++ . +++++.+... .....++.++++..++.+.++
T Consensus 277 ~~~gv~PDi---vt~gK~l~-gG~~Pi~av~~--~-----~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le 343 (466)
T PRK07036 277 AVFGIQPDI---ITFAKGLT-SGYQPLGAVII--S-----ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIE 343 (466)
T ss_pred hhcCCCCCE---EEEccccc-cCccccEEEEE--c-----HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHH
Confidence 111212233 35699998 78 48999999 6 5787776531 111244556777666665543
No 328
>PRK07483 hypothetical protein; Provisional
Probab=98.30 E-value=0.00019 Score=77.60 Aligned_cols=264 Identities=13% Similarity=0.113 Sum_probs=146.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.. .|... .-..+....+|+.+..... -..+++.. +++
T Consensus 28 dG~~ylD~~~g~~~~~lGh~--~p~v~~av~~ql~~~---~~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f--~~s 98 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHS--HPRVIAAIHAQIDRL---AYAHTSFFTTEPAEALADRLVAAAP--AGLEHVYF--VSG 98 (443)
T ss_pred CCCEEEEcCccHhhhccCCC--CHHHHHHHHHHHHhc---cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--cCC
Confidence 45677899888777666653 467777777766542 11111 0112344556666543221 12368999 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHH-HhhcCC------------eEEEEecccCCCC---CCC--
Q psy14428 240 GSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRF-CTDSRL------------NVGAYRYFDNKTN---GLD-- 296 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~-~~~~G~------------~~~~v~~~d~~~~---g~d-- 296 (583)
|++|.+.+..+.+... +...+|+...-+|...... ....|. .+..++....... ..+
T Consensus 99 GsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK07483 99 GSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDE 178 (443)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHH
Confidence 9999998866655541 2135688777777665321 111110 1122221000000 000
Q ss_pred ------hhhHHHHHHcC-CCCcEEEEeCCCCC-CCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHH
Q psy14428 297 ------FAGMMEDIKAM-PERSILFLQTSSHN-PTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSL 367 (583)
Q Consensus 297 ------~~~l~~~l~~~-~~~~~~i~i~~p~N-PTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~ 367 (583)
++.+++.+... .+...++++-.-+- --| ...+++-+++|.++|++||+++|.||+...|..-+ .....
T Consensus 179 ~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~a~ 255 (443)
T PRK07483 179 AYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG---TLFAC 255 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc---HHHHH
Confidence 13455545432 23444444432231 124 45678899999999999999999999998885433 12222
Q ss_pred HHHHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHH----hccccCCChHHHHHHHHHh---CC
Q psy14428 368 RYFAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILI----RGFYSNPPIHGARIVTEIL---SD 439 (583)
Q Consensus 368 ~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~----~~~~~~~s~~~q~~~~~~l---~~ 439 (583)
..+ +-.+.++ +++|.++ .|+ -+|.+++ . +++.+.+.... ....++.++++..++.+.+ ++
T Consensus 256 ~~~-gv~PDiv---~~gK~l~-gG~~Pi~av~~--~-----~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~ 323 (443)
T PRK07483 256 EED-GVAPDLV---TIAKGLG-AGYQPIGAVLA--S-----DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE 323 (443)
T ss_pred hhc-CCCCCee---eehhhhc-cCccccEEEEE--c-----HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 222 2223344 3599998 786 9999999 6 47777775321 1124455666666555554 34
Q ss_pred hhhhhhhhh
Q psy14428 440 PKLKAQCDE 448 (583)
Q Consensus 440 ~~~~~~~~~ 448 (583)
+.+..+..+
T Consensus 324 ~~l~~~~~~ 332 (443)
T PRK07483 324 DGLLANVRA 332 (443)
T ss_pred cCHHHHHHH
Confidence 444444333
No 329
>PRK07678 aminotransferase; Validated
Probab=98.30 E-value=0.00018 Score=77.90 Aligned_cols=253 Identities=10% Similarity=-0.024 Sum_probs=140.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .+.+.+++.+.++.... +...... +....+|+.+....+. .+++.+ +++|
T Consensus 45 dG~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~--~~~~~~~-~~~~~lae~l~~~~~~---~~~v~f--~~sG 114 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYG--RKELAEAAYEQLKTLSY--FPLTQSH-EPAIKLAEKLNEWLGG---EYVIFF--SNSG 114 (451)
T ss_pred CCCEEEEccccHHhhcCCCC--CHHHHHHHHHHHHhcCc--cccccCC-HHHHHHHHHHHHhCCC---CCEEEE--eCCc
Confidence 45667888887776666643 36777777666654111 1111122 2233444444332211 257888 9999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhh-cCC------------eEEEEecccCCC--CCC-----
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTD-SRL------------NVGAYRYFDNKT--NGL----- 295 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~-~G~------------~~~~v~~~d~~~--~g~----- 295 (583)
++|.+.+..+.+... +...+|+...-+|.+....... .|. .+..+|..+... ++.
T Consensus 115 seA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (451)
T PRK07678 115 SEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIY 194 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHH
Confidence 999998766655542 1125788888777765432221 111 122233211100 000
Q ss_pred C---hhhHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH
Q psy14428 296 D---FAGMMEDIKAM-PERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF 370 (583)
Q Consensus 296 d---~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~ 370 (583)
+ .+.+++.++.. .++..++++-.-+.--|.+ .+++-++++.++|++||+++|.||+.-.|..-+ .......+
T Consensus 195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~~~~ 271 (451)
T PRK07678 195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG---KAFGFMNY 271 (451)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc---hhHHHHhc
Confidence 1 12244445422 3344555543333334544 578899999999999999999999998885433 12222222
Q ss_pred HHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH------HhccccCCChHHHHHHHHHhC
Q psy14428 371 AKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL------IRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 371 ~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~------~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+-.+.++ +|+|.++ .| +-+|.+++ . +++++.+..- ....+++.++++..++.+.|+
T Consensus 272 -gv~PDiv---t~gK~lg-gG~~Pi~av~~--~-----~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~ 334 (451)
T PRK07678 272 -GVKPDII---TMAKGIT-SAYLPLSATAV--K-----KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLE 334 (451)
T ss_pred -CCCCCEE---Eeecccc-cCCcceeEEEE--c-----HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 2223333 6799998 67 69999999 6 5787777531 112344556666666555543
No 330
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.29 E-value=0.00018 Score=78.09 Aligned_cols=266 Identities=12% Similarity=0.061 Sum_probs=142.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+++..... ...-..+.+..+|+.+.......... +++.+ -+++
T Consensus 61 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f-~~~S 135 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHN--HPVVIEAIQQVLADELPLH--TLDLTTPVKDQFVQDLFASLPEAFAREAKIQF-CGPT 135 (464)
T ss_pred CCCEEEEccCCccccccCCC--CHHHHHHHHHHHHhhhccc--ccccCCHHHHHHHHHHHHhCcccccccceEEE-eCCC
Confidence 45677898888776666653 4677777776664321111 10011233444444443321111111 25544 1468
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cC------------CeEEEEecccCC--CCC--------CC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SR------------LNVGAYRYFDNK--TNG--------LD 296 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G------------~~~~~v~~~d~~--~~g--------~d 296 (583)
|++|.+.+..+.+.... ..+|+...-+|.+....... .| -.+..+|..+.. .++ .+
T Consensus 136 GSEAve~AlklAr~~tg-r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 214 (464)
T PRK06938 136 GTDAVEAALKLVKTATG-RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRAN 214 (464)
T ss_pred cHHHHHHHHHHHHHhhC-CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHH
Confidence 89999987666555433 46788877777765332221 11 012333331110 001 12
Q ss_pred hhhHHHHHHcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH
Q psy14428 297 FAGMMEDIKAMP---ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK 372 (583)
Q Consensus 297 ~~~l~~~l~~~~---~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~ 372 (583)
.+.+++.+++.. ....++++-.-+---|. ..+++-++++.++|+++|+++|.||+...|.--+ .......+ +
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~e~~-g 290 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG---KMFAFEHA-G 290 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---HHHHHHhc-C
Confidence 455666664321 13344444222222354 3569999999999999999999999999885433 11122221 2
Q ss_pred hcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---Chhhhhhhhh
Q psy14428 373 EVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDE 448 (583)
Q Consensus 373 ~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~ 448 (583)
-.+.+++ ++|.++ .|+-+|.+++ . ++ ++.+........++.++++..++.+.++ ++.+..+.++
T Consensus 291 v~PDiv~---~gKglg-gG~PlsAv~~--~-----~~-~~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~ 357 (464)
T PRK06938 291 IIPDVVV---LSKAIG-GSLPLAVVVY--R-----EW-LDTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAA 357 (464)
T ss_pred CCCCEEE---eecccc-CCCceEEEee--h-----hH-hhccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 2234444 489998 7999999998 5 23 3433221122344556666666655543 4444444333
No 331
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.29 E-value=2.2e-05 Score=87.74 Aligned_cols=172 Identities=13% Similarity=0.072 Sum_probs=112.1
Q ss_pred CCCCC-HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeE
Q psy14428 204 NIGGD-AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNV 282 (583)
Q Consensus 204 ~~~G~-~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 282 (583)
.+.|. .+-.+.+|+.++.. .-.++ |+|++.++..+ +..++.+||.|++..-+.-.....+.+.|+++
T Consensus 192 ~~~G~i~eAe~~AA~~fgAd-------~tyfv--vNGTS~~n~av---~~a~~~~Gd~VLvdRN~HKSv~haLilsga~P 259 (714)
T PRK15400 192 DHSGPHKEAEEYIARVFNAD-------RSYMV--TNGTSTANKIV---GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTP 259 (714)
T ss_pred CCChHHHHHHHHHHHHhCCC-------cEEEE--eCchHHHHHHH---HHHhcCCCCEEEeecccHHHHHHHHHHcCCeE
Confidence 34454 55555666666532 34566 99999998874 44566779999999999888888899999999
Q ss_pred EEEecccCCCC----CCC-----hhhHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecc
Q psy14428 283 GAYRYFDNKTN----GLD-----FAGMMEDIKAMPE--RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMA 351 (583)
Q Consensus 283 ~~v~~~d~~~~----g~d-----~~~l~~~l~~~~~--~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~ 351 (583)
++++. +-+.+ +++ .+.+++++++... +++.+++.+| +=-|.+++.+++ ++.|..++ |++|||
T Consensus 260 VYl~P-~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I---~~~~~~~~--ilvDEA 332 (714)
T PRK15400 260 IYFRP-TRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFI---KKTLDVKS--IHFDSA 332 (714)
T ss_pred EEecc-cccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHH---HHHhCCCC--EEEEcc
Confidence 99865 22223 334 7888888876532 2225666555 335999987555 55555666 689999
Q ss_pred CCCC-CCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceE
Q psy14428 352 YLGL-TSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396 (583)
Q Consensus 352 Y~~l-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~ 396 (583)
|... .|.+...+..++....+..+.++++.|.-|++ +|+.-+.
T Consensus 333 wgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS 376 (714)
T PRK15400 333 WVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQAS 376 (714)
T ss_pred chhhhccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHh
Confidence 8754 34331111223322122235679999999997 5665553
No 332
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.28 E-value=0.0001 Score=79.12 Aligned_cols=252 Identities=9% Similarity=0.026 Sum_probs=137.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+++.....+. .. ..+....+|+.+..... -.-+++.+ +++|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~-~~-~~~~~~~lae~L~~~~p--~~~~~v~f--~~SG 109 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHG--HPRLKAAAHKQIDTMSHVMFG-GL-THEPAIKLTRKLLNLTD--NGLDHVFY--SDSG 109 (422)
T ss_pred CCCEEEEcchhHHHhcCCCC--CHHHHHHHHHHHHhCCCcccC-Cc-CCHHHHHHHHHHHhhCC--CCcCEEEE--eCCc
Confidence 45677899888877666653 467777777666542111110 00 11223444444433211 11368999 9999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhh-cCC-------------eEEEEecccCCCCCCChhhH-
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTD-SRL-------------NVGAYRYFDNKTNGLDFAGM- 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~-~G~-------------~~~~v~~~d~~~~g~d~~~l- 300 (583)
++|.+.+..+.+... +...+|+...-+|......... .+- ....+|.. . ..+.+.+..
T Consensus 110 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~-~-~~~~~~~~~~ 187 (422)
T PRK05630 110 SVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAP-P-VRGSSPQEIS 187 (422)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCC-c-ccCCChHHHH
Confidence 999998766555442 1135788888888764322211 110 12223321 0 011122111
Q ss_pred --HHHHHcC-CCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcC
Q psy14428 301 --MEDIKAM-PERSILFLQTS-SHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVG 375 (583)
Q Consensus 301 --~~~l~~~-~~~~~~i~i~~-p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 375 (583)
.+.+++. ..+..++++-. .+.-.|. ..+.+-+++|.++|++|++++|.||+.-.|...+ ....... .+-.+
T Consensus 188 ~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~~~-~gv~P 263 (422)
T PRK05630 188 EYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG---ELFATLA-AGVTP 263 (422)
T ss_pred HHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc---hhhHHHh-cCCCC
Confidence 1222211 23444454433 2555676 4577899999999999999999999997774433 1112211 12122
Q ss_pred cEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH------HhccccCCChHHHHHHHHHh
Q psy14428 376 QLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL------IRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 376 ~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~------~~~~~~~~s~~~q~~~~~~l 437 (583)
.++ +|+|.++ .| .-+|++++ + +++.+.+... .-...++.++++..++.+.+
T Consensus 264 Di~---t~gK~l~-gG~~p~~av~~--~-----~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL 321 (422)
T PRK05630 264 DIM---CVGKALT-GGFMSFAATLC--T-----DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASL 321 (422)
T ss_pred Cee---eeechhh-cCccccceeec--c-----HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHH
Confidence 333 7899886 67 48899998 6 4777776531 11223455666655555444
No 333
>PLN02880 tyrosine decarboxylase
Probab=98.27 E-value=0.00022 Score=77.88 Aligned_cols=260 Identities=10% Similarity=-0.001 Sum_probs=158.9
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-----CCCeEEEecCCchhHHHHHHHHHHH-hCC-
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK-----DNRLAIVQGISGSGSLRVGTAFLER-FYP- 256 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~-----~~~I~i~~t~G~~~al~l~~~~l~~-~~~- 256 (583)
..+.+.+...... ....|....+..++.+.+.+|+.+..|.+-. ...-++ |+||++|...+..+.+. ..+
T Consensus 97 ~~lad~l~~~~n~-~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~al~~AR~~~~~~ 173 (490)
T PLN02880 97 GFLGEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVVLLAARDRVLRK 173 (490)
T ss_pred HHHHHHHHHhhcc-CCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHHHHHHHHHHHHH
Confidence 4455555544432 2344656667889999999999887765421 123567 89999987654323222 110
Q ss_pred ------CCCEEEEcCCCChhhHHHHhhcCCe---EEEEecccC-CCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCC
Q psy14428 257 ------GVKTVYFPTPTWNGHVRFCTDSRLN---VGAYRYFDN-KTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPT 323 (583)
Q Consensus 257 ------~gd~Vlv~~P~y~~~~~~~~~~G~~---~~~v~~~d~-~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPT 323 (583)
+.-.|++.+-+.......+..+|+. ++.||. |. +++.+|++.|++.+++. ...+.+++-+-..-+|
T Consensus 174 ~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~-d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~ 252 (490)
T PLN02880 174 VGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKT-DSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSS 252 (490)
T ss_pred hcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeec-CCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcC
Confidence 1124556776777778888889984 788888 54 34689999999999653 3345666666677788
Q ss_pred CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-cCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 324 GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 324 G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
|.+-+ +++|.++|+++|+|+.+|-+|+.+.... +..+...+. ..---+..++-|.+. .-.-+|.+++ .
T Consensus 253 GaiDp---l~eI~~i~~~~~iwlHVDaA~gg~~~~~-----~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llv--r 321 (490)
T PLN02880 253 TAVDP---LLELGKIAKSNGMWFHVDAAYAGSACIC-----PEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWV--K 321 (490)
T ss_pred cccCc---HHHHHHHHHHcCCEEEEehhhHHHHHhC-----HHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEE--e
Confidence 87766 5666888999999999999998875421 112221111 111246678899885 7788899998 5
Q ss_pred CchhHHHHHHHHHHHHhcccc-----------------C---CChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 403 TSDETERIMSQLKILIRGFYS-----------------N---PPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~-----------------~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
+. ..+++.+..-...... . ...+.-++..+.+..+.+.+++++..+....+.+.++
T Consensus 322 ~~---~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~ 397 (490)
T PLN02880 322 DR---NALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVA 397 (490)
T ss_pred CH---HHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43 2444444321111000 0 0133344445556666677776655555555555554
No 334
>PLN02590 probable tyrosine decarboxylase
Probab=98.26 E-value=0.00018 Score=78.83 Aligned_cols=260 Identities=11% Similarity=0.035 Sum_probs=163.2
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-----CCCeEEEecCCchhHHHHHHHHHHHh-C--
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK-----DNRLAIVQGISGSGSLRVGTAFLERF-Y-- 255 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~-----~~~I~i~~t~G~~~al~l~~~~l~~~-~-- 255 (583)
..+-+.+...... ....|....+..++.+.+.+|+.+..|.+-. ...=++ |+|+++|...+..+.+.. .
T Consensus 145 ~~lgd~l~sa~n~-~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~al~aAR~~~~~~ 221 (539)
T PLN02590 145 GFLGEMLNAGLSV-VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVVVLAARDRILKK 221 (539)
T ss_pred HHHHHHHHHhccc-ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHHHHHHHHHHHhh
Confidence 4455555554432 2456777788899999999999988776521 123566 899998876542222221 0
Q ss_pred -----CCCCEEEEcCCCChhhHHHHhhcCC---eEEEEecccC-CCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCC
Q psy14428 256 -----PGVKTVYFPTPTWNGHVRFCTDSRL---NVGAYRYFDN-KTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPT 323 (583)
Q Consensus 256 -----~~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~d~-~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPT 323 (583)
.+.-.|++.+-+.......+..+|+ +++.||+ |. +++.+|++.|+++|++. ...+.+++-+-..-+|
T Consensus 222 ~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~-d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~t 300 (539)
T PLN02590 222 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKT-DSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSS 300 (539)
T ss_pred hcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeC-CCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence 1122555667676778888898888 5888998 54 34789999999999653 2344555555555667
Q ss_pred CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCc-EEEEecCcccccccCccceEEEEEcC
Q psy14428 324 GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQ-LCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 324 G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
|. -|.+.+|.++|+++++|+-+|-+|+.+..-. +..+.+.+.-++ -=+..++-|.+. ...-+|.+++ .
T Consensus 301 Ga---iDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~-----~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~llv--r 369 (539)
T PLN02590 301 AA---VDPLVPLGNIAKKYGIWLHVDAAYAGNACIC-----PEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLWV--K 369 (539)
T ss_pred cc---cCCHHHHHHHHHHhCCeEEEecchhhhhhcC-----hhhHHHhcCCccCCEEEECchhhcC-cCcCEEEEEe--c
Confidence 64 4567888999999999999999999876432 122222221111 123446789775 7778898888 6
Q ss_pred CchhHHHHHHHHHHHHhcc--------------------ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 403 TSDETERIMSQLKILIRGF--------------------YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~--------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
++. .+++.+....... .-....+--+++.+.+..+.+.+++++..+..+.+.+.++
T Consensus 370 ~~~---~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~ 445 (539)
T PLN02590 370 DRY---SLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVA 445 (539)
T ss_pred CHH---HHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 532 4544443211111 0011344455666666667777777776666666666654
No 335
>PRK06917 hypothetical protein; Provisional
Probab=98.26 E-value=0.00027 Score=76.42 Aligned_cols=255 Identities=12% Similarity=0.052 Sum_probs=140.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+... .+.+.... ..+.+..+|+.+.... +-..+++.+ +++|
T Consensus 29 dG~~ylD~~~g~~~~~lGh~--hp~v~~Ai~~ql~~~-~~~~~~~~-~~~~~~~lae~L~~~~--p~~~~~v~f--~~sG 100 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHG--VKEIADAIKEQAEEV-SFVYRSQF-TSEPAEKLAKKLSDLS--PGDLNWSFF--VNSG 100 (447)
T ss_pred CCCEEEECchhHHhccCCCC--CHHHHHHHHHHHhhC-cCcccccc-CCHHHHHHHHHHHHhC--CCCCCEEEE--eCCh
Confidence 45567888877776556643 467777777666542 11111101 1234445555554322 111257888 9999
Q ss_pred hhHHHHHHHHHHHh---C--CCCCEEEEcCCCChhhHHHHhh-cCC------------eEEEEecccCCC--CCC-----
Q psy14428 241 SGSLRVGTAFLERF---Y--PGVKTVYFPTPTWNGHVRFCTD-SRL------------NVGAYRYFDNKT--NGL----- 295 (583)
Q Consensus 241 ~~al~l~~~~l~~~---~--~~gd~Vlv~~P~y~~~~~~~~~-~G~------------~~~~v~~~d~~~--~g~----- 295 (583)
++|.+.+..+.+.. . ....+|+...-+|......... .|. .+..+|...... .+-
T Consensus 101 sEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 180 (447)
T PRK06917 101 SEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTC 180 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHH
Confidence 99999875554332 1 2236788888887765432221 111 111122100000 000
Q ss_pred ---ChhhHHHHHHcCC-CCcEEEEeC-CCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 296 ---DFAGMMEDIKAMP-ERSILFLQT-SSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 296 ---d~~~l~~~l~~~~-~~~~~i~i~-~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
+.+.+++.+++.. +...++++- -..|--|. ..+++-+++|.++|+++|+++|.||+...|.--+ .......
T Consensus 181 ~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG---~~~a~~~ 257 (447)
T PRK06917 181 QLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG---AMFAMEH 257 (447)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc---chhhHHh
Confidence 1345556665432 234444432 22233333 5679999999999999999999999998874332 1111222
Q ss_pred HHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHH----hccccCCChHHHHHHHHHhC
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILI----RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~----~~~~~~~s~~~q~~~~~~l~ 438 (583)
+ +-.+.+ -+|+|.++ .|+ -+|.+++ . +++++.+.... ....++.++++..++.+.++
T Consensus 258 ~-gv~PDi---~~~gK~l~-~G~~Pi~a~~~--~-----~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 319 (447)
T PRK06917 258 W-GVEPDI---MTLGKGLG-AGYTPIAATVV--S-----DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLE 319 (447)
T ss_pred c-CCCCCE---EEeeehhc-cCCcceEEEEE--c-----HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHH
Confidence 1 222333 46699998 785 8999999 6 57777765321 11244566777666665554
No 336
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.26 E-value=8.3e-05 Score=80.09 Aligned_cols=215 Identities=12% Similarity=0.104 Sum_probs=124.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA-NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...||+..|.+....|.- .|.+.+++.+.++... .+. +.....+|-+.+++... ..+++.+ +++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~--~~~~~~~~~~~la~~l~~~~p-------~~~~v~f--~~s 112 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHA--YPPVVEAVREALQDGC--NFTRPSAIELDAAESFLELID-------GADMVKF--CKN 112 (431)
T ss_pred CCCEEEEccccccchhcCCC--CHHHHHHHHHHHHhCc--CCCCCCHHHHHHHHHHHHhCC-------ccceEEE--ecC
Confidence 45667888888776666653 3677877777765522 222 22111234444444331 1258888 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEc-CCCChhhHHHH-----hhcCCe----EEEEecccCCCCCCChhhHHHHHHcCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFP-TPTWNGHVRFC-----TDSRLN----VGAYRYFDNKTNGLDFAGMMEDIKAMPE 309 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~-~P~y~~~~~~~-----~~~G~~----~~~v~~~d~~~~g~d~~~l~~~l~~~~~ 309 (583)
|++|.+.+..+.+.... ...|+.. .-+|....... ...|.. ...+.+ . .+ |++.+++.+++...
T Consensus 113 GseA~e~AlklAr~~tg-r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~~---d~~~l~~~l~~~~~ 186 (431)
T PRK06209 113 GSDATSAAVRLARAYTG-RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF-R-YN---DIASLEALFEDHPG 186 (431)
T ss_pred HHHHHHHHHHHHHHHhC-CCeEEEeccCccccccccccccCCCCCCCChhHhcccccc-C-CC---CHHHHHHHHHhCCC
Confidence 99999988766555533 2445443 12221110000 001110 001111 1 11 68888888864333
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccc
Q psy14428 310 RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGL 389 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l 389 (583)
+..++++ -|- .|...+.+.+++|.++|++|++++|.||+...+.... .......+..+. +.++||.+|
T Consensus 187 ~~aavi~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-----~g~~~~~gv~PD---i~t~gK~lg- 254 (431)
T PRK06209 187 RIACVIL-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-----RGAQKLYGIVPD---LSCFGKALG- 254 (431)
T ss_pred CEEEEEE-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-----chhhHHhCCCcc---eeeehhhhc-
Confidence 3444443 442 3557788999999999999999999999987764321 112211111122 467899998
Q ss_pred cCccceEEEEEcCCchhHHHHHHH
Q psy14428 390 YGERVGTFSVLTPTSDETERIMSQ 413 (583)
Q Consensus 390 ~GlRiG~lv~~~p~~~~~~~li~~ 413 (583)
.|+-+|++++ + +++++.
T Consensus 255 gG~p~~av~~--~-----~~i~~~ 271 (431)
T PRK06209 255 NGFAVSALAG--K-----REYMEL 271 (431)
T ss_pred CCcccEEEEE--H-----HHHHhh
Confidence 7899999999 6 467765
No 337
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.25 E-value=0.00023 Score=77.37 Aligned_cols=208 Identities=14% Similarity=0.056 Sum_probs=109.2
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCC------CCCCCCHHHHHHHHHHHhCCCCCCCCCCCe-EEE
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEY------ANIGGDAKFCKLAAQLAYGEDFPAFKDNRL-AIV 235 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y------~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I-~i~ 235 (583)
...|+|=..+.. ..+.+.+++...+.+....+| +...-..++.+...+...+.++ ...+.+ +-+
T Consensus 34 ~~~l~liasen~-------~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv 104 (475)
T PLN03226 34 WKGLELIASENF-------TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNV 104 (475)
T ss_pred HcCeeEecCCcc-------CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEec
Confidence 355666544432 457888888777733112222 2222233443311112222221 122333 223
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCCEEEEcCC-C--ChhhHHHHhh---cCCe----EEEEecccCCCCCCChhhHHHHHH
Q psy14428 236 QGISGSGSLRVGTAFLERFYPGVKTVYFPTP-T--WNGHVRFCTD---SRLN----VGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P-~--y~~~~~~~~~---~G~~----~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
+...|+.|... ++..+++|||+|+..+. . +..+...... .+.. ++++.. +++++.+|++.+++.+.
T Consensus 105 ~~~SG~~AN~a---v~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d~Le~~l~ 180 (475)
T PLN03226 105 QPLSGSPANFA---VYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYDKLEKKAM 180 (475)
T ss_pred CcCchHHHHHH---HHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHHHHHHHHh
Confidence 33445556554 34556778999998553 2 2322222111 1111 224444 44567899999999885
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 306 AMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
+. +++++++ ..++ +|...+.+ +|.++|+++|++++.|++..-=..... ....++ + .--+++.|++|
T Consensus 181 ~~--~pklIv~-~~S~-~s~~~D~a---~i~~ia~~~ga~LlvD~AH~~Gli~~~-~~~~p~----~--~~Div~~t~hK 246 (475)
T PLN03226 181 LF--RPKLIIA-GASA-YPRDWDYA---RMRKIADKVGALLMCDMAHISGLVAAQ-EAASPF----E--YCDVVTTTTHK 246 (475)
T ss_pred hc--CCeEEEE-ecCc-CCCccCHH---HHHHHHHHcCCEEEEEchhhhCcccCC-CCCCCC----C--CCeEEEecCcc
Confidence 43 3455544 2333 56666544 667889999999999998653222110 000111 1 23478999999
Q ss_pred cccccCccceEEEE
Q psy14428 386 NMGLYGERVGTFSV 399 (583)
Q Consensus 386 ~~~l~GlRiG~lv~ 399 (583)
++ .|-|-|++++
T Consensus 247 ~L--~GP~Gg~I~~ 258 (475)
T PLN03226 247 SL--RGPRGGMIFF 258 (475)
T ss_pred cc--cCCCceEEEE
Confidence 98 3455588887
No 338
>PLN02271 serine hydroxymethyltransferase
Probab=98.23 E-value=0.00025 Score=76.74 Aligned_cols=206 Identities=12% Similarity=0.028 Sum_probs=125.0
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC------CCCCCHHHHHHHHHHHhCCCCCCCCC--CCeEE
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA------NIGGDAKFCKLAAQLAYGEDFPAFKD--NRLAI 234 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~Lr~aia~~~~~~~g~~~~~--~~I~i 234 (583)
...|+|=..+.- ..+.+.+++...+.+....+|+ ......++.....+...+.++.+... -||-.
T Consensus 148 ~~~l~LIASEN~-------~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp 220 (586)
T PLN02271 148 FKGIELIASENF-------VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQP 220 (586)
T ss_pred hcCeeecccccc-------CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceee
Confidence 455666544432 4578888877666553233333 22333455444444444444433211 24444
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH---------hhcCC--eEEEEecccCCCCCCChhhHHHH
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC---------TDSRL--NVGAYRYFDNKTNGLDFAGMMED 303 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---------~~~G~--~~~~v~~~d~~~~g~d~~~l~~~ 303 (583)
-+ |+.|...+ +..++.|||+|+..+..+.++.... ...|. +++++++ |++++.+|.+.+++.
T Consensus 221 --~S-Gs~AN~aV---~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~-d~~~g~IDyd~lek~ 293 (586)
T PLN02271 221 --YS-CTSANFAV---YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKV-NPQTGYIDYDKLEEK 293 (586)
T ss_pred --cc-HHHHHHHH---HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccc-ccccCccCHHHHHHH
Confidence 44 44455553 4455778999999988888775532 23454 4445556 556678999999885
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC-CCCCCCCCchHHHHHHHHhcCcEEEEec
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG-LTSGDFDKDAFSLRYFAKEVGQLCLAQS 382 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~-l~~~~~~~~~~~~~~~~~~~~~vi~i~S 382 (583)
+. ..+++++++..-.|| ..++. +++.++|.+++++++.|.+..- +.-.+. -+.++ ..--++..|
T Consensus 294 a~--~~rPKLII~g~Sayp--r~~D~---~~i~eIAdevGA~LmvD~AH~aGLIa~g~--~~sP~------~~aDvvt~T 358 (586)
T PLN02271 294 AL--DFRPKILICGGSSYP--REWDY---ARFRQIADKCGAVLMCDMAHISGLVAAKE--CVNPF------DYCDIVTST 358 (586)
T ss_pred hh--hcCCeEEEECchhcc--CcCCH---HHHHHHHHHcCCEEEEECcccccccccCc--CCCCC------cCCcEEEeC
Confidence 43 567888888666777 44554 4557778899999999999753 332221 00111 123478899
Q ss_pred CcccccccCccceEEEE
Q psy14428 383 FSKNMGLYGERVGTFSV 399 (583)
Q Consensus 383 ~SK~~~l~GlRiG~lv~ 399 (583)
..|++ .|=|-|.++.
T Consensus 359 THKtL--rGPrGG~I~~ 373 (586)
T PLN02271 359 THKSL--RGPRGGIIFY 373 (586)
T ss_pred CcccC--CCCCceEEEe
Confidence 99997 6778788888
No 339
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.21 E-value=0.00046 Score=74.85 Aligned_cols=254 Identities=11% Similarity=0.032 Sum_probs=138.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.+........ ..-..+.+..+|+.+.......... ..++. +++
T Consensus 56 dG~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~q~~~~~~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~--~~S 129 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHN--HPDVLQSIQDVLTSGLPLHT--LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFT--GPS 129 (459)
T ss_pred CCCEEEEcccchhhccCCCC--CHHHHHHHHHHHhhhccccc--cccCCHHHHHHHHHHHHhCCCccccceEEEe--CCC
Confidence 45567888888776666643 36777777766643211111 1112345555666664432111001 12344 688
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-C------------CeEEEEecccCCC--CC----CChhhH
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-R------------LNVGAYRYFDNKT--NG----LDFAGM 300 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G------------~~~~~v~~~d~~~--~g----~d~~~l 300 (583)
|++|.+.+..+.+.... .+.|+...-+|.+........ | ..+..+|..+... ++ -+.+.+
T Consensus 130 GsEAve~AlklAr~~tg-r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (459)
T PRK06931 130 GADAVEAAIKLAKTYTG-RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKAL 208 (459)
T ss_pred cHHHHHHHHHHHHHhcC-CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHH
Confidence 99999988666665543 567888888887664433321 1 1123333311100 00 012222
Q ss_pred ----HHHHHc---CCCCcEEEEe-CCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH
Q psy14428 301 ----MEDIKA---MPERSILFLQ-TSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA 371 (583)
Q Consensus 301 ----~~~l~~---~~~~~~~i~i-~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~ 371 (583)
++.++. ..++..++++ |-..+ .|. ..+++-+++|.++|+++|+++|.||+...|.--+ .......+
T Consensus 209 ~~~~~~~~~~~~~~~~~iAAvI~EPiqg~-gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG---~~~a~~~~- 283 (459)
T PRK06931 209 TYYFENFIEDVESGVRKPAAVILEAIQGE-GGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG---KMFAFEHA- 283 (459)
T ss_pred HHHHHHHHHhhhcCCCceEEEEEccccCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc---hHHHhhhc-
Confidence 222221 1223444444 33333 354 4678999999999999999999999998885333 12222221
Q ss_pred HhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 372 KEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 372 ~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+-.+.++ +++|.++ .|+-+|.+++ . ++ ++.+........++.++++..++.+.|+
T Consensus 284 gv~PDiv---t~gK~l~-gG~Pi~av~~--~-----~~-~~~~~~~~~~~T~~gnpla~aaala~L~ 338 (459)
T PRK06931 284 GIEPDII---VMSKAVG-GGLPLAVLGI--K-----KE-FDAWQPGGHTGTFRGNQLAMATGLTTLK 338 (459)
T ss_pred CCCCCEE---Eeccccc-CCcceeeeee--H-----HH-HhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 2223344 4599998 7999998777 4 23 3444322222344567777666665553
No 340
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.21 E-value=0.00022 Score=73.66 Aligned_cols=217 Identities=18% Similarity=0.069 Sum_probs=138.7
Q ss_pred ccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHH-HHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCK-LAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 165 ~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~-aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
+||.+.-......|.....+...+++..+.+....+.|.-..|...-|- .+++.+.. . ...+.+++ ++..+.|
T Consensus 22 viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~---~-~~aea~~i--vnnn~aA 95 (395)
T COG1921 22 VINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCG---L-TGAEAAAI--VNNNAAA 95 (395)
T ss_pred hhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhc---c-cchhheee--ECCcHHH
Confidence 4444443344445555566788888888887654456655445433332 33333322 1 23577888 7888888
Q ss_pred HHHHHHHHHHhCCCCCEEE------EcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEE-e
Q psy14428 244 LRVGTAFLERFYPGVKTVY------FPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFL-Q 316 (583)
Q Consensus 244 l~l~~~~l~~~~~~gd~Vl------v~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~-i 316 (583)
+.++ +..+.. +.+|+ |+ +.-+....+++..|++++.+-.. . .-...+++.++ .+++.+++ +
T Consensus 96 Vll~---~~al~~-~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~t-n---~t~~~d~~~AI---ne~ta~llkV 163 (395)
T COG1921 96 VLLT---LNALAE-GKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTT-N---RTHLKDYELAI---NENTALLLKV 163 (395)
T ss_pred HHHH---Hhhhcc-CCeEEEEcccccc-CCCCChhHHHHHcCCEEEEeccc-C---cCCHHHHHHHh---ccCCeeEEEE
Confidence 8774 455555 43443 44 67778899999999999988652 2 23677787877 45555444 3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceE
Q psy14428 317 TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396 (583)
Q Consensus 317 ~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~ 396 (583)
-++|-+--..++ .++++++|++++++++.|.+-..+.... +.++.+... +--+++.|=-|.++ |-|-|.
T Consensus 164 ~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~e-----~~l~~~la~-GaDLV~~SgdKllg--GPqaGi 232 (395)
T COG1921 164 HSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDKE-----PDLREALAL-GADLVSFSGDKLLG--GPQAGI 232 (395)
T ss_pred eecccccccccc---HHHHHHHHHHcCCCEEEecCCccccccc-----cchhHHHhc-CCCEEEEecchhcC--CCccce
Confidence 344433333444 4456888999999999999987765421 123333332 44577788899885 889999
Q ss_pred EEEEcCCchhHHHHHHHHHHH
Q psy14428 397 FSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 397 lv~~~p~~~~~~~li~~l~~~ 417 (583)
+++ . +++|+++++.
T Consensus 233 i~G--k-----KelI~~lq~~ 246 (395)
T COG1921 233 IVG--K-----KELIEKLQSH 246 (395)
T ss_pred Eec--h-----HHHHHHHHhh
Confidence 999 6 6899988875
No 341
>PRK07480 putative aminotransferase; Validated
Probab=98.19 E-value=0.00037 Score=75.56 Aligned_cols=255 Identities=13% Similarity=0.101 Sum_probs=140.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .|.+.+++.+.++.. .+ +... ....+.+..+|+.+..... -.-+++.. +++
T Consensus 48 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~-~~-~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f--~~S 119 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYG--RKELADAAARQMREL-PY-YNTFFKTTHPPAIELAAKLAEVAP--PGFNHVFF--TNS 119 (456)
T ss_pred CCCEEEEccchHHHhcCCCC--CHHHHHHHHHHHHhc-CC-cccccccCCHHHHHHHHHHHHhCC--CCcCEEEE--eCC
Confidence 45567888877766555643 467777776666541 11 1111 1223444555555543321 12358899 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHH-hhcCC------------eEEEEecccCC--CCCCC---
Q psy14428 240 GSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFC-TDSRL------------NVGAYRYFDNK--TNGLD--- 296 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~-~~~G~------------~~~~v~~~d~~--~~g~d--- 296 (583)
|++|.+.+..+.+... ....+|+...-+|....... ...|. .+..++..... ..+.+
T Consensus 120 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 199 (456)
T PRK07480 120 GSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEE 199 (456)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHH
Confidence 9999998766655541 21346777777776643211 11111 01112210000 00011
Q ss_pred -----hhhHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 297 -----FAGMMEDIKAM-PERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 297 -----~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
.+.+++.+.+. ..+..++++-.-+.--|.. .+.+-+++|.++|++||+++|.||+...|.--+ .......
T Consensus 200 ~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~ 276 (456)
T PRK07480 200 FGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG---EWFGSQH 276 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhhhhh
Confidence 24444444332 2344555554334434654 567789999999999999999999998884333 1112222
Q ss_pred HHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHH----HHhccccCCChHHHHHHHHHhC
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKI----LIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~----~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+ +-.+.+ -+|+|.++ .|+ -+|.+++ . +++++.+.. ......++.++++..++.+.|+
T Consensus 277 ~-gv~PDi---v~~gK~l~-gG~~Pi~av~~--~-----~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 338 (456)
T PRK07480 277 F-GIKPDL---MTIAKGLT-SGYIPMGAVGV--G-----DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLR 338 (456)
T ss_pred c-CCCCCe---eeeehhhc-cCCccceEEEE--c-----HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 1 212233 46699998 784 8999999 5 477777631 1122345566777776666553
No 342
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.16 E-value=0.00014 Score=81.39 Aligned_cols=174 Identities=13% Similarity=0.010 Sum_probs=111.7
Q ss_pred CCCCC-HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeE
Q psy14428 204 NIGGD-AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNV 282 (583)
Q Consensus 204 ~~~G~-~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~ 282 (583)
.+.|. .+-.+.+|+.++.. .-.++ ++|++.++..+ +..++.+||.|++..-+.-.....+.+.|+++
T Consensus 192 ~~~G~i~eAe~~aA~~fgAd-------~tyfv--vNGTS~~n~av---~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~P 259 (713)
T PRK15399 192 DHTGPHLEAEEYIARTFGAE-------QSYIV--TNGTSTSNKIV---GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVP 259 (713)
T ss_pred CCChHHHHHHHHHHHHhCCC-------cEEEE--eCChHHHHHHH---HHHhcCCCCEEEeecccHHHHHHHHHHcCCee
Confidence 34443 55555666666532 34566 99999998874 44566779999999999888888899999999
Q ss_pred EEEecccCCCC----CCCh-----hhHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEE-EEec
Q psy14428 283 GAYRYFDNKTN----GLDF-----AGMMEDIKAMPE--RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYP-FFDM 350 (583)
Q Consensus 283 ~~v~~~d~~~~----g~d~-----~~l~~~l~~~~~--~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~i-I~De 350 (583)
++++. .-+.+ +++. +.+++++++.+. +++.+++.+| +=-|.+++.+++.++ | ++.+ ++||
T Consensus 260 VYl~P-~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~---~---g~~~ilvDE 331 (713)
T PRK15399 260 IWLKP-TRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQT---L---DVPSIHFDS 331 (713)
T ss_pred EEecc-cccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHH---h---CCCEEEEec
Confidence 99864 22223 3445 888888876532 2256677666 445999987766554 4 4545 6999
Q ss_pred cCCCC-CCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 351 AYLGL-TSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 351 ~Y~~l-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
||... .|.+...+..++........-++++.|.-|++ +|+.=+.++-
T Consensus 332 Ahgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iH 379 (713)
T PRK15399 332 AWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIH 379 (713)
T ss_pred cchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeee
Confidence 98753 34321111222221101223457799999997 6777665443
No 343
>KOG1401|consensus
Probab=98.15 E-value=0.0005 Score=70.40 Aligned_cols=264 Identities=12% Similarity=0.097 Sum_probs=154.8
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CC-CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NL-DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
....||+..+.|....|+. .|.+.+++.+-+.. .. ...|..-. .-+|-+.+.+.+.+ -.+++|.+ .+.
T Consensus 55 g~EyiD~~ssw~~~~~Gha--npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff--~ns 124 (433)
T KOG1401|consen 55 GKEYIDFTSSWAVTILGHA--NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFF--CNS 124 (433)
T ss_pred cceeeeeccceeccccCCC--CHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEE--ecC
Confidence 4456888888887665643 46777776655543 11 12222211 33444444444432 26789999 999
Q ss_pred chhHHHHHHHHHHHhCCCCC-----EEEEcCCCChhh-HHHHhhcCCeEEEEecccCC--C----CCCChhhHHHHHHcC
Q psy14428 240 GSGSLRVGTAFLERFYPGVK-----TVYFPTPTWNGH-VRFCTDSRLNVGAYRYFDNK--T----NGLDFAGMMEDIKAM 307 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd-----~Vlv~~P~y~~~-~~~~~~~G~~~~~v~~~d~~--~----~g~d~~~l~~~l~~~ 307 (583)
|++|.+.+..+.+.+...+. .|+...=+|..- ...+...+......|. |+- + .-=|...+++.++..
T Consensus 125 GTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~-~p~~p~v~~~~ynd~t~l~k~~~~h 203 (433)
T KOG1401|consen 125 GTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPF-DPIAPDVVTAEYNDSTALEKLFESH 203 (433)
T ss_pred CcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCC-CCCCCceeecccCCHHHHHHHHHhC
Confidence 99999987655554432222 266555566543 3333333333333332 110 0 001678888888765
Q ss_pred CCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 308 PERSILFLQTSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
.....++++---+---| ...++|-++.|...|+++++++|.||+.-.|..-+ .......+ .-.+. |-++.|.
T Consensus 204 ~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g---~~~a~e~~-~~~PD---I~t~aK~ 276 (433)
T KOG1401|consen 204 KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG---YGWAQEYF-GVTPD---ITTVAKP 276 (433)
T ss_pred CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc---hHHHHHHh-CcCCc---ceeehhh
Confidence 43444444433332233 33578889999999999999999999998876554 22222222 22222 4567899
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHHHHh---ccccCCChHHHHHHHHHhC---ChhhhhhhhhHHH
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKILIR---GFYSNPPIHGARIVTEILS---DPKLKAQCDETER 451 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~---~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~ 451 (583)
++ .|+-+|..++ . +++.+.+.--.. ...++.++++-.++...++ ++++.+.+...-+
T Consensus 277 L~-gGlPigA~~v--~-----~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k 339 (433)
T KOG1401|consen 277 LG-GGLPIGATGV--R-----DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGK 339 (433)
T ss_pred cc-CCceeEEEee--h-----HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHH
Confidence 98 9999999999 5 477777765333 3345667777766666554 6666555544433
No 344
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.13 E-value=0.00027 Score=74.31 Aligned_cols=239 Identities=11% Similarity=0.062 Sum_probs=133.0
Q ss_pred CCCChHHHHHHHHHhccC---CCCCCCCCCCC-------HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHH
Q psy14428 180 PYVLPSVKEAERRIYEKN---LDHEYANIGGD-------AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTA 249 (583)
Q Consensus 180 p~~~~~v~~a~~~~~~~~---~~~~Y~~~~G~-------~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~ 249 (583)
...++.+.+++.....+. ....+....-. .+.|+.++++++ . -+..+|+++ +.+++.+++.+
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~----~-~~~~~v~~~-~gsgt~~~Ea~-- 83 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLN----I-PDNYKVLFL-QGGASLQFAMV-- 83 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhC----C-CCCcEEEEE-cCCchHHHHHH--
Confidence 336688888877664220 01112222222 344445555443 2 123456661 45567777774
Q ss_pred HHHHhCCCCCEEEEcCCC-Chh-hHHHHhhcCCeEEEEecccCCCCCCChhhHHH-HHHcCCCCcEEEEeCCCCCCCCCC
Q psy14428 250 FLERFYPGVKTVYFPTPT-WNG-HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME-DIKAMPERSILFLQTSSHNPTGVD 326 (583)
Q Consensus 250 ~l~~~~~~gd~Vlv~~P~-y~~-~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~-~l~~~~~~~~~i~i~~p~NPTG~~ 326 (583)
+..+..+||++++..-+ |.. +..+++.+|.. ..+.. +......+..++++ .+ .++.+++.++...|.||+.
T Consensus 84 -~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~-~~~~g~~~~~~~~~~~l---~~~~~~V~~th~eTstGv~ 157 (360)
T PRK05355 84 -PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAAS-SEDDGFTYIPPLDEWQL---SDDAAYVHYTSNETIDGTE 157 (360)
T ss_pred -HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEec-ccccCCCCCCChhhccC---CCCCCEEEEccCCCcceEe
Confidence 44555568888877655 332 35577778865 55554 32122334444444 44 4467899999999999999
Q ss_pred CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchh
Q psy14428 327 LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDE 406 (583)
Q Consensus 327 ~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~ 406 (583)
.+ .+.+| +++++|+|-+-.--... ..+ +..+ +++.|--|.+|.|| +|.+++ +
T Consensus 158 ~~--~i~~i------~g~l~vVDavss~g~~~------idv----~~~d--~~~~ssqK~lgP~G--lg~l~~--s---- 209 (360)
T PRK05355 158 FH--ELPDT------GDVPLVADMSSDILSRP------IDV----SKFG--LIYAGAQKNIGPAG--LTIVIV--R---- 209 (360)
T ss_pred cC--ccccc------CCCcEEEEcCccccCcc------CCH----HHcc--EEEEeccccccCCc--eEEEEE--C----
Confidence 84 24444 79999999985433211 112 2223 78888889998666 588888 6
Q ss_pred HHHHHHHHHHH-----------H-hccccCCChHHHHHHHHHhC---Ch-hhhhhhhhHHHHHHHHHHHHh
Q psy14428 407 TERIMSQLKIL-----------I-RGFYSNPPIHGARIVTEILS---DP-KLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 407 ~~~li~~l~~~-----------~-~~~~~~~s~~~q~~~~~~l~---~~-~~~~~~~~~~~~~~~l~~~~r 461 (583)
+++++++... . .....++|...-.++.+.++ +. .++...++.++..+.+.+.++
T Consensus 210 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~ 279 (360)
T PRK05355 210 -EDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAID 279 (360)
T ss_pred -HHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence 4566555431 1 11234445555555444443 33 455555555555544444443
No 345
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.12 E-value=0.00052 Score=75.29 Aligned_cols=244 Identities=10% Similarity=-0.020 Sum_probs=148.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCC-C--------CCC--CCeEEEecCCchhHHHHHHHHHHHh-CC----------
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFP-A--------FKD--NRLAIVQGISGSGSLRVGTAFLERF-YP---------- 256 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~-~--------~~~--~~I~i~~t~G~~~al~l~~~~l~~~-~~---------- 256 (583)
...+.......++.+.+.+|+.+..+. + -.+ ..=++ |+||+.|.-.+..+.+.. .+
T Consensus 118 ~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~--tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~ 195 (522)
T TIGR03799 118 LVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAF--CSGGTVANITALWVARNRLLKADGDFKGVAR 195 (522)
T ss_pred cceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEE--cCchHHHHHHHHHHHHHHhcccccccccccc
Confidence 344555666788888888888665321 0 011 22466 899999877653333321 11
Q ss_pred ------------CCCEEEEcCCCChhhHHHHhhcCC---eEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCC
Q psy14428 257 ------------GVKTVYFPTPTWNGHVRFCTDSRL---NVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTS 318 (583)
Q Consensus 257 ------------~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~ 318 (583)
++..|++.+-........++..|. +++.||+ |+ ++.+|++.+++.+++. ..+..+++-+.
T Consensus 196 ~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~-d~-~g~~d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 196 EGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT-DA-NNRIDVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred ccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe-CC-CCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 134677777777777788888888 7999999 54 4789999999988642 22333444445
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-cCcEEEEecCcccccccCccceEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
.++.||.+-+ +++|+++|+++++++.+|-+|+....-. ...+...+. ..--.+..|.-|.++ .-.-+|.+
T Consensus 274 Gtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~-----~~~r~~l~gle~aDSit~d~HK~l~-~P~g~G~l 344 (522)
T TIGR03799 274 GTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLS-----NTYRHLLKGIERADSVTIDAHKQLY-VPMGAGMV 344 (522)
T ss_pred cCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhC-----HHHHHHhcCchhCCEEEEChhhcCC-cCcccEEE
Confidence 6678998877 5666888999999999999997643211 111221111 112346678899665 33557999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhc------------cc-cC--CChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 398 SVLTPTSDETERIMSQLKILIRG------------FY-SN--PPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~------------~~-~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
+. .++ .+.+.+...... .. .+ .-.+..+++.+.+....++..+++..+..+.+.+.++
T Consensus 345 lv--r~~----~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~ 417 (522)
T TIGR03799 345 LF--KDP----ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQ 417 (522)
T ss_pred EE--eCH----HHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88 542 344444331000 00 11 1123355666677767777777766666665555544
No 346
>PRK06149 hypothetical protein; Provisional
Probab=98.11 E-value=0.00046 Score=81.70 Aligned_cols=250 Identities=12% Similarity=0.031 Sum_probs=135.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.. ..|. -.+.+.+++.+.+... ....| . .+....+++.+..... -..+.+.+ +++
T Consensus 583 dG~~ylD~~~~~~--~lGh--~hp~v~~Ai~~q~~~l~~~~~~----~-~~~~~elae~L~~~~p--~~~~~v~f--~~S 649 (972)
T PRK06149 583 AGRSYLDMVNNVT--VLGH--GHPRLAAAAARQWSLLNTNSRF----H-YAAVAEFSERLAALAP--DGLDTVFL--VNS 649 (972)
T ss_pred CCCEEEECCCCcc--ccCC--CCHHHHHHHHHHHHhccccccc----c-CHHHHHHHHHHHHhCC--CCcCEEEE--eCC
Confidence 3456677776543 2443 2366777766655431 11112 1 1233444444433211 11258888 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-hh-------cCC------eEEEEecccCCC--CC-CC-----h
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TD-------SRL------NVGAYRYFDNKT--NG-LD-----F 297 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~-------~G~------~~~~v~~~d~~~--~g-~d-----~ 297 (583)
|++|.+.+..+.+.... ...|+..+-+|.+..... .. .+. .+..++..+... ++ .+ .
T Consensus 650 GsEA~e~AlklAr~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~ 728 (972)
T PRK06149 650 GSEANDLAIRLAWAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYV 728 (972)
T ss_pred chHHHHHHHHHHHHhcC-CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHH
Confidence 99999988666656544 467877777777533111 00 000 122232211000 11 11 1
Q ss_pred hhHHHHHHc---CCCCcEEEEe-CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh
Q psy14428 298 AGMMEDIKA---MPERSILFLQ-TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE 373 (583)
Q Consensus 298 ~~l~~~l~~---~~~~~~~i~i-~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~ 373 (583)
+.+++.++. ...+..++++ |-..+--....+++-+++|.++|++||+++|.||+.-.|.--+ ........+ +-
T Consensus 729 ~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG--~~~~a~e~~-gv 805 (972)
T PRK06149 729 RDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG--HYFWGFEQQ-GV 805 (972)
T ss_pred HHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC--ccchhhhhc-CC
Confidence 333333432 2233444443 3334443456788999999999999999999999997774433 111122221 11
Q ss_pred cCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHh-ccccCCChHHHHHHHHHhC
Q psy14428 374 VGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIR-GFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 374 ~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~-~~~~~~s~~~q~~~~~~l~ 438 (583)
...++ +|+|.+| .|+-+|.+++ . +++++.+..... ...++.++++..++.+.|+
T Consensus 806 ~PDiv---t~gK~lg-~G~Pl~av~~--~-----~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~ 860 (972)
T PRK06149 806 VPDII---TMAKGMG-NGHPLGAVIT--R-----REIAEALEAEGYFFSSTGGSPVSCRIGMAVLD 860 (972)
T ss_pred CCCEE---Eeccccc-CCeeeEEEEE--c-----HHHHhhhccCCcccCCCCCCHHHHHHHHHHHH
Confidence 23333 7899998 8999999999 5 577777753111 1223566666666655553
No 347
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.10 E-value=0.00027 Score=82.07 Aligned_cols=179 Identities=13% Similarity=0.069 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCC--CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---HHhhcCCeE
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDN--RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNV 282 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~--~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~ 282 (583)
+.+.|+.||++++. +++ .|++ |+|+++|+.+++..+ -..+||+|++..-.+..... .++..|+++
T Consensus 80 ~e~aR~~ia~~lga------~~~~~~VvF--tsnaT~alnlva~~l--~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v 149 (805)
T PLN02724 80 IESARQQVLEYFNA------PPSDYACVF--TSGATAALKLVGETF--PWSSESHFCYTLENHNSVLGIREYALEKGAAA 149 (805)
T ss_pred HHHHHHHHHHHhCC------CccceEEEE--eCChHHHHHHHHHHC--CCCCCCeEEEeeccccchHHHHHHHHHcCCeE
Confidence 56788888888863 334 5788 999999999974332 13559999987555554433 344569999
Q ss_pred EEEecccCC-------CCCCCh--hhHHHHHH----c---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc----
Q psy14428 283 GAYRYFDNK-------TNGLDF--AGMMEDIK----A---MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR---- 342 (583)
Q Consensus 283 ~~v~~~d~~-------~~g~d~--~~l~~~l~----~---~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~---- 342 (583)
..+++ +.+ ...++. +.+++.+. . ..++++++.++.-+|-||..++.++..++.+.+..+
T Consensus 150 ~~v~~-~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~ 228 (805)
T PLN02724 150 IAVDI-EEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKS 228 (805)
T ss_pred Eeccc-hhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccC
Confidence 98887 411 112222 34444321 0 124568999999999999999988654444433222
Q ss_pred -CeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 343 -HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 343 -~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
++++++|-+-.-=.. +..+. ..+--++..|+-|.+|.| --+|.+++ . +++++.+.
T Consensus 229 g~~~v~vDaaQ~~g~~------piDv~----~~~~Dfl~~S~HK~~GgP-~G~G~L~v--r-----~~~~~~l~ 284 (805)
T PLN02724 229 GRWMVLLDAAKGCGTS------PPDLS----RYPADFVVVSFYKIFGYP-TGLGALLV--R-----RDAAKLLK 284 (805)
T ss_pred cceEEEeehhhhcCCC------CCChh----hcCCCEEEEecceeccCC-CCceEEEE--e-----hhhhhhhc
Confidence 367899987432111 11122 224457888999988723 13699998 5 34555544
No 348
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.10 E-value=8.5e-05 Score=85.35 Aligned_cols=181 Identities=12% Similarity=0.098 Sum_probs=119.7
Q ss_pred CCCCCCC---CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC-----CCCCEEEEcCCCChh
Q psy14428 199 DHEYANI---GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNG 270 (583)
Q Consensus 199 ~~~Y~~~---~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~ 270 (583)
.+.|.|. +|..++...+..|+.+-.|.+ ++.+ +.+|+.+|-......++... .+.++|+++.-....
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd----~~Sl-~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgt 590 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD----AISL-QPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGT 590 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC----Cccc-CCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCc
Confidence 4455543 677777777777776665554 2333 24444444332212233211 123578888877755
Q ss_pred hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q psy14428 271 HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDM 350 (583)
Q Consensus 271 ~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De 350 (583)
....++..|++++.++. |+ ++.+|++++++.+++...+++++++.+|+| +|.+-+ .+++|+++|++++.++++|-
T Consensus 591 nPasa~~~G~~Vv~V~~-d~-~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 591 NPASAAMAGMQVVPVNC-DQ-DGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred CHHHHHHCCCEEEEecc-CC-CCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEe
Confidence 56668889999999998 53 478999999999965446889999999999 886653 37888999999999999999
Q ss_pred cCCC-CCCCCCCCchHHHHHHHHhcCcEEEEecCccccc----ccCccceEEEE
Q psy14428 351 AYLG-LTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG----LYGERVGTFSV 399 (583)
Q Consensus 351 ~Y~~-l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~----l~GlRiG~lv~ 399 (583)
++.- +..-. . +...+--++..|.-|+|+ .-|=-+|.+.+
T Consensus 666 Aq~~al~~l~---~-------Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~v 709 (939)
T TIGR00461 666 ANMNAQVGLT---S-------PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGV 709 (939)
T ss_pred cChhhCCCCC---C-------ccccCCCEEEecCCccCCCCCCCCCCCeEEEEE
Confidence 9733 22110 0 122344577788888765 33445788888
No 349
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.08 E-value=9.2e-05 Score=77.71 Aligned_cols=196 Identities=18% Similarity=0.153 Sum_probs=104.3
Q ss_pred CChHHHHHHHHHhccCCCCCCC------CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYA------NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~------~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~ 255 (583)
..+.+.+++...+.+....+|+ ...-..++.+...+...+-++..- .++-+-|+..+|+.|... ++..++
T Consensus 32 ~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~-~~w~anvqp~SGs~An~a---v~~aLl 107 (399)
T PF00464_consen 32 MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEP-KEWYANVQPHSGSQANLA---VYMALL 107 (399)
T ss_dssp --HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-ST-TTEEEE---SSHHHHHHH---HHHHHT
T ss_pred cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCc-ccceEEeecCCchHHHHH---HHHHHH
Confidence 4567777776666542222332 122223333333333333333321 122233455666667665 455677
Q ss_pred CCCCEEEEcCCCChhhHHH-----H-----hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCC
Q psy14428 256 PGVKTVYFPTPTWNGHVRF-----C-----TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGV 325 (583)
Q Consensus 256 ~~gd~Vlv~~P~y~~~~~~-----~-----~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~ 325 (583)
+|||+|+..++...++... . .....+.+.+++ |+++..+|.+.+++.+++. ++++|++.--..|
T Consensus 108 ~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~-d~~~~~ID~d~l~~~a~~~--kPklIi~G~S~y~--- 181 (399)
T PF00464_consen 108 KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPV-DPDTGLIDYDELEKLAKEH--KPKLIICGASSYP--- 181 (399)
T ss_dssp -TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHHHHHH----SEEEEE-SSTS---
T ss_pred hhcCcEEecChhhcccccccccccccccccccceEEEEeeee-ecCCCeECHHHHHHHHhhc--CCCEEEECchhcc---
Confidence 8899999998876655321 1 223457889999 7777899999999988654 4556665332222
Q ss_pred CCCHHHHHHHHHHHHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 326 DLSEDQWRQLAVVVKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 326 ~~s~~~~~~l~~~a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
=.-+++++.++|.+.|.+|+.|-++. .|.-.+. -+.|+. . --|+.+|.-|+| +|=|-|.+++
T Consensus 182 --~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~--~~~P~~-----~-ADvvt~sThKtl--~GPrggiI~~ 244 (399)
T PF00464_consen 182 --RPIDFKRFREIADEVGAYLMADISHIAGLIAGGL--FPNPFP-----Y-ADVVTGSTHKTL--RGPRGGIILT 244 (399)
T ss_dssp --S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS--S--GCC-----T-SSEEEEESSGGG---SSS-EEEEE
T ss_pred --CccCHHHHHHHHHhcCcEEEecccccccceehhe--ecCccc-----c-ceEEEeeccccc--cccCceEEEE
Confidence 23356777888899999999999963 3333331 111221 1 237888999998 8999999998
No 350
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.07 E-value=3.4e-05 Score=81.26 Aligned_cols=205 Identities=11% Similarity=0.062 Sum_probs=127.5
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-----CCCeEEEecCCchhHHHHHHHHHHHhC---
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK-----DNRLAIVQGISGSGSLRVGTAFLERFY--- 255 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~-----~~~I~i~~t~G~~~al~l~~~~l~~~~--- 255 (583)
..+.+.+......+ ...|.......++.+.+.+|+.+..|.+-+ ...=++ |+||++++..+....+...
T Consensus 54 ~i~~~~l~~~~n~n-~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~--t~Ggt~anl~al~aAR~~~~~~ 130 (373)
T PF00282_consen 54 SILADLLASALNQN-GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVF--TSGGTEANLYALLAARERALPR 130 (373)
T ss_dssp HHHHHHHHHHHT-B-TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccc-ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeE--eccchHHHHHHHHHHHHHHhhh
Confidence 34555555555432 455655667788999999999988776622 123456 9999999876532322211
Q ss_pred --CC-----CC-EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCC---cEEEEeCCCCCCCC
Q psy14428 256 --PG-----VK-TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPER---SILFLQTSSHNPTG 324 (583)
Q Consensus 256 --~~-----gd-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~---~~~i~i~~p~NPTG 324 (583)
.. ++ .|++.+-+.......+..+|+.++.||+ |+ ++.+|++.+++.+++...+ ..+++.+-..-.||
T Consensus 131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~-~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G 208 (373)
T PF00282_consen 131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPT-DE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTG 208 (373)
T ss_dssp HHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-B-BT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred hhhcccccccccccccccccccHHHHhcceeeeEEEEecC-Cc-chhhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence 00 12 4556665666678899999999999999 55 4689999999988764222 33455555666677
Q ss_pred CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE-EEEecCcccccccCccceEEEEEcCC
Q psy14428 325 VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL-CLAQSFSKNMGLYGERVGTFSVLTPT 403 (583)
Q Consensus 325 ~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v-i~i~S~SK~~~l~GlRiG~lv~~~p~ 403 (583)
.+ |.+.+|.++|+++++|+-+|-+|+...+-.. . .+.+...-+++ =+.-++-|.++ .-.-.|+++. .+
T Consensus 209 a~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~--~---~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~--r~ 277 (373)
T PF00282_consen 209 AI---DPLEEIADICEKYNIWLHVDAAYGGSALLSP--E---YRHLLFGIERADSITIDPHKWLG-VPYGCGVLLV--RD 277 (373)
T ss_dssp BB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHC--T---TGGGGTTGGGESEEEEETTTTTS--SSS-EEEEE--SS
T ss_pred cc---cCHHHHhhhccccceeeeecccccccccccc--c---ccccccccccccccccchhhhhc-CCccceeEEe--ec
Confidence 55 7788899999999999999999998332110 0 11111111222 13346899887 6668999999 76
Q ss_pred c
Q psy14428 404 S 404 (583)
Q Consensus 404 ~ 404 (583)
+
T Consensus 278 ~ 278 (373)
T PF00282_consen 278 K 278 (373)
T ss_dssp G
T ss_pred c
Confidence 4
No 351
>KOG1359|consensus
Probab=98.06 E-value=0.00052 Score=67.08 Aligned_cols=216 Identities=15% Similarity=0.098 Sum_probs=117.6
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CC-------CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeE
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NL-------DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLA 233 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~-------~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~ 233 (583)
..++++|...++- |.. ..|.+..+..+++++ +. .-+|.+. ...|...||++.+++ |-|+
T Consensus 66 ~k~ilnFcaNnYL---GLs-shPeii~a~~~aleeyGaGlssvrfIcGtq~i--Hk~LE~kiAqfh~rE-------D~il 132 (417)
T KOG1359|consen 66 DKKILNFCANNYL---GLS-SHPEIINAGQKALEEYGAGLSSVRFICGTQDI--HKLLESKIAQFHGRE-------DTIL 132 (417)
T ss_pred ccceeeecccccc---ccc-CChHHHHHHHHHHHHhCCCccceeEEecchHH--HHHHHHHHHHHhCCC-------ceEE
Confidence 4456777766653 322 235566665555544 10 1122111 255667777777653 3344
Q ss_pred EEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-CCCcE
Q psy14428 234 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-PERSI 312 (583)
Q Consensus 234 i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-~~~~~ 312 (583)
. +.+-.|-.- ++..+..|.|.|+-.+-.......-++... ....+|+..++..+... ..+-+
T Consensus 133 y---pscfdANag---~feail~pedAvfSDeLNhASIIdGirLck-----------ry~h~dv~~l~~~l~~a~k~r~k 195 (417)
T KOG1359|consen 133 Y---PSCFDANAG---AFEAILTPEDAVFSDELNHASIIDGIRLCK-----------RYRHVDVFDLEHCLISACKMRLK 195 (417)
T ss_pred e---ccccccchH---HHHHhcChhhhhhccccccchhhhhhHHHh-----------hhccchhHHHHHHHHHhhhheEE
Confidence 3 222222221 122234446666555443333333222221 11233555666555433 34555
Q ss_pred EEEeCCCCCCCCCCCCH----HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 313 LFLQTSSHNPTGVDLSE----DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~s~----~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
+++ |-.++|. .-+++|.+++++||.++++||++.-+.++.. ..-....+--+.+-.|..++++|.+|
T Consensus 196 lv~-------TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~t--GrGt~E~~~vm~~vdiinsTLgKAlG 266 (417)
T KOG1359|consen 196 LVV-------TDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGET--GRGTAEEFGVMGDVDIINSTLGKALG 266 (417)
T ss_pred EEE-------ecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCC--CCChHHHhCCCCcceehhhhhhhhhc
Confidence 555 3333333 3577788899999999999999998877642 11122222123445688889999986
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCC
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNP 425 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~ 425 (583)
|.--||..+ | ..+++-++...+...++.
T Consensus 267 --ga~GGyttg--p-----~~li~llrqr~RpylFSn 294 (417)
T KOG1359|consen 267 --GASGGYTTG--P-----KPLISLLRQRSRPYLFSN 294 (417)
T ss_pred --CCCCCCccC--C-----hhHHHHHHhcCCceeecC
Confidence 555699999 7 578888887766654433
No 352
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.05 E-value=0.00019 Score=80.40 Aligned_cols=174 Identities=16% Similarity=0.068 Sum_probs=110.1
Q ss_pred CCCC-HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH-HhhcCCeE
Q psy14428 205 IGGD-AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF-CTDSRLNV 282 (583)
Q Consensus 205 ~~G~-~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~~~ 282 (583)
+.|. .+-.+.+|+.++.. .-.++ ++|++.++..+ +..++.+||.|++..-+.-..... +.+.|+++
T Consensus 172 ~eG~i~eAq~~AA~~fgAd-------~tyFl--vNGTS~gn~a~---i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~P 239 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNAD-------KTYFV--LNGTSASNKVV---TNALLTPGDLVLFDRNNHKSNHHGALIQAGATP 239 (720)
T ss_pred CChHHHHHHHHHHHHhCCC-------ceEEE--eCChhHHHHHH---HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeE
Confidence 3443 44555555655432 34566 99999998874 455677799999999998877774 78899999
Q ss_pred EEEecccCCCCC----CChhh-----HHHHHHcCCC-------CcEEEEeCCCCCCCCCCCCHHHHHHHHHH-HHhcCeE
Q psy14428 283 GAYRYFDNKTNG----LDFAG-----MMEDIKAMPE-------RSILFLQTSSHNPTGVDLSEDQWRQLAVV-VKQRHLY 345 (583)
Q Consensus 283 ~~v~~~d~~~~g----~d~~~-----l~~~l~~~~~-------~~~~i~i~~p~NPTG~~~s~~~~~~l~~~-a~~~~i~ 345 (583)
++++. +-+.+| ++.+. +++++++..+ +.+++++.+|.- -|.+++.++ |++. +..++ +
T Consensus 240 VYl~P-~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~---I~~~~~h~~~-~ 313 (720)
T PRK13578 240 VYLET-ARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQ---VVDKIGHLCD-Y 313 (720)
T ss_pred EEeec-cccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHH---HHHHhhccCC-c
Confidence 98865 222233 45444 7778866421 247777755532 399998654 4555 45667 9
Q ss_pred EEEeccCCCC-CCCCCCCchHHH-HHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 346 PFFDMAYLGL-TSGDFDKDAFSL-RYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 346 iI~De~Y~~l-~~~~~~~~~~~~-~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
|++||||... .|.+.-++.+.. .........++++.|.-|++ +++--+.++
T Consensus 314 llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~L 366 (720)
T PRK13578 314 ILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQI 366 (720)
T ss_pred EEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhh
Confidence 9999998753 443310112211 12111234589999999997 567666444
No 353
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.97 E-value=0.00046 Score=74.47 Aligned_cols=166 Identities=14% Similarity=0.044 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEec-
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY- 287 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~- 287 (583)
.+..+.+|+.++.. ...++ ++|++.|...+ ...++++||.|+++..+.-.....+-+.|+.++.+..
T Consensus 73 ~eAqe~aA~~fgAd-------~tyFv--vNGTS~ank~v---i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~ 140 (557)
T COG1982 73 KEAQELAARVFGAD-------HTYFV--VNGTSTANKAV---INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPS 140 (557)
T ss_pred HHHHHHHHHHhCCC-------ceEEE--ECCccHHHHHH---HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCC
Confidence 44555555555432 24556 89999998874 4556777999999999998888888889998888754
Q ss_pred ccCC---CCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC
Q psy14428 288 FDNK---TNGLDFAGMMEDIKAMPERSILFLQTSSHNPT--GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 288 ~d~~---~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPT--G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~ 362 (583)
.++. -.+++.+.+.+++.+.....++.++ .||| |++++.+++ ++++.+.++|+..|++..-..-..
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vi---tnpTYdGv~~n~~~i---~~~~~~~~a~v~~deah~~~~~~~--- 211 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHPDAEKLAVI---TNPTYDGVCYNLRKI---VELLHHYGAWVLYDEAHPAHFDFS--- 211 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhChhhheeEEE---ecCccceEeecHHHH---HHHHhhcCceEEhhhcCccccccc---
Confidence 2221 1578899999888765433256655 4556 999986554 666778899999999975332111
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccCccce-EEEE
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG-TFSV 399 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG-~lv~ 399 (583)
+..+-. ....+.+++..|.-|..+ ++.-+ ++..
T Consensus 212 ~~l~~~--~~~~~~~~~tqS~HK~l~--alSQaS~iHv 245 (557)
T COG1982 212 PMLPES--ALNGGADFVTQSTHKLLA--ALSQASMIHV 245 (557)
T ss_pred ccCcch--hhhcCceEEEechhhhhh--hhhhhHHHhh
Confidence 111111 233578999999999874 55555 4444
No 354
>PRK06148 hypothetical protein; Provisional
Probab=97.93 E-value=0.0011 Score=78.80 Aligned_cols=258 Identities=14% Similarity=0.058 Sum_probs=140.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.. ..|. -.|.+.+++.+.+... ....|. .+.+..+|+.+..... -.-+.+.+ +++
T Consensus 622 dG~~ylD~~~g~~--~lGH--~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f--~nS 688 (1013)
T PRK06148 622 RGRAYLDCFNNVC--HVGH--AHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFF--VNS 688 (1013)
T ss_pred CCCEEEEcccChh--hcCC--CCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEE--eCC
Confidence 3455677766642 3453 2467777776665431 112221 2334445555543221 11257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-c--------C----CeEEEEecccCC--CCCC-C-------
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-S--------R----LNVGAYRYFDNK--TNGL-D------- 296 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~--------G----~~~~~v~~~d~~--~~g~-d------- 296 (583)
|++|.+.+..+.+.... ...|+..+-+|.+....... . + -.+..++..+.. .++. +
T Consensus 689 GsEA~e~AlklAr~~tG-r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 767 (1013)
T PRK06148 689 GSEANSLALRLARAHTG-QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRF 767 (1013)
T ss_pred cHHHHHHHHHHHHHhcC-CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHH
Confidence 99999998776666543 56788888777665321111 0 1 011111110000 0110 1
Q ss_pred hhhHHHHHHc---CCCCcEEEEe-CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH
Q psy14428 297 FAGMMEDIKA---MPERSILFLQ-TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK 372 (583)
Q Consensus 297 ~~~l~~~l~~---~~~~~~~i~i-~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~ 372 (583)
.+.+++.++. ......++++ |-..+--....+++-++++.++|+++|+++|.||+...|.--+ ........+ +
T Consensus 768 ~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG--~~~~a~e~~-g 844 (1013)
T PRK06148 768 AESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVG--SHWWAFETQ-G 844 (1013)
T ss_pred HHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCC--Ccchhhhhc-C
Confidence 1234444432 1233444444 2333332246688999999999999999999999998885333 011122221 1
Q ss_pred hcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH-hccccCCChHHHHHHHHHh---CChhhhhhh
Q psy14428 373 EVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI-RGFYSNPPIHGARIVTEIL---SDPKLKAQC 446 (583)
Q Consensus 373 ~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~-~~~~~~~s~~~q~~~~~~l---~~~~~~~~~ 446 (583)
-.+.+ -+++|.+| .|+-+|.+++ . +++++.+..-. -...++.++++..++.+.+ +++.+.++.
T Consensus 845 v~PDi---vt~gK~lg-gG~Plgav~~--~-----~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~ 911 (1013)
T PRK06148 845 VVPDI---VTMGKPIG-NGHPMGAVVT--T-----REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNA 911 (1013)
T ss_pred CCcce---eeeccccc-CCcceEEEEE--c-----HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHH
Confidence 12233 45699998 8999999999 5 57877765321 1234556677766655544 344444433
No 355
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.92 E-value=0.00033 Score=81.81 Aligned_cols=176 Identities=13% Similarity=0.157 Sum_probs=114.2
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCC----EEEEcCCCChhhHHHHhhcC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVK----TVYFPTPTWNGHVRFCTDSR 279 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd----~Vlv~~P~y~~~~~~~~~~G 279 (583)
.+|..++...+.+++.+-.|. +++.+ +.+|+++|.......++.+ ..+|+ +|++++-.+......+...|
T Consensus 537 ~qG~l~~i~e~q~~l~eltG~----d~~sl-~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G 611 (954)
T PRK05367 537 AAGYRELIDQLEAWLAEITGY----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAG 611 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCC----CCEEE-CccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCC
Confidence 366777777777887766554 35655 2445555543332223322 23355 69999988877777889999
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.+++ |. +..+|++.+++.++....+..++++.+|++- |.. .+.+++|+++|+++|+++++|.++..-...-
T Consensus 612 ~~vv~v~~-d~-~G~iD~~~L~~~i~~~~~~la~V~it~pst~-G~~--e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l 686 (954)
T PRK05367 612 MKVVVVAC-DE-NGNIDLDDLRAKAEEHADNLAAIMITYPSTH-GVF--EETIREICEIVHEHGGQVYLDGANMNAQVGL 686 (954)
T ss_pred CEEEEECC-CC-CCCcCHHHHHHHHhccCCCeEEEEEEcCCCC-eee--cCCHHHHHHHHHHcCCEEEEECcChhhccCC
Confidence 99999998 54 3689999999988654345677777777654 322 2347888999999999999999984221110
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCccccccc----CccceEEEE
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY----GERVGTFSV 399 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~----GlRiG~lv~ 399 (583)
. . +...+--++..|.-|+|+.| |=-+|.+.+
T Consensus 687 ---~--~----pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~v 721 (954)
T PRK05367 687 ---A--R----PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGV 721 (954)
T ss_pred ---C--C----hhhcCCCEEEecCcccCCCCcCCCCCceEEEee
Confidence 0 0 11123346677788987532 334677777
No 356
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.91 E-value=0.00091 Score=68.43 Aligned_cols=204 Identities=18% Similarity=0.172 Sum_probs=125.6
Q ss_pred CChHHHHHHHHHhccCCCCC-----CC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC
Q psy14428 182 VLPSVKEAERRIYEKNLDHE-----YA-NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~-----Y~-~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~ 255 (583)
..+.+.++.-..+.+....+ |. -..=..++.+...+..++-+|.+ --||-. .+|++..... +..+.
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~--~anVQP--hSGs~AN~av----~~All 109 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAE--YANVQP--HSGSQANQAV----YLALL 109 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCC--ccccCC--CCchHHHHHH----HHHHc
Confidence 45788888777665522222 32 22223444444444444434322 234444 6666544432 34466
Q ss_pred CCCCEEEEcCCCChhhHHHH---hhcC--CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH-
Q psy14428 256 PGVKTVYFPTPTWNGHVRFC---TDSR--LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE- 329 (583)
Q Consensus 256 ~~gd~Vlv~~P~y~~~~~~~---~~~G--~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~- 329 (583)
+|||+|+-.+-....+..-- ...| .+++.+++ |.+++.+|.|.+++...+. ++++++.. +..+++
T Consensus 110 ~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~v-d~et~~IDyD~~~k~a~e~--kPK~ii~G------~SaY~r~ 180 (413)
T COG0112 110 QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGV-DPETGLIDYDEVEKLAKEV--KPKLIIAG------GSAYSRP 180 (413)
T ss_pred CCCCeEecccCCCCCcccCCCCCCccceeEEeEeccc-ccccCccCHHHHHHHHHHh--CCCEEEEC------ccccccc
Confidence 77999999888777665432 1112 47888888 7778899999999888653 55666632 222322
Q ss_pred HHHHHHHHHHHhcCeEEEEeccC-CCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAY-LGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y-~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
-+++++.++|.+-|.+++.|-++ .+|.-.+.. +.|+. .--|+..|--|+| +|=|-|.+.+ .+ +
T Consensus 181 id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~--p~P~~------~AdvVTtTTHKTl--rGPrGG~Il~--~~----e 244 (413)
T COG0112 181 IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVH--PNPLP------HADVVTTTTHKTL--RGPRGGIILT--ND----E 244 (413)
T ss_pred cCHHHHHHHHHHhCceEEehHHHHHHHHhcccC--CCCCC------ccceEeCCcccCC--CCCCceEEEe--cc----H
Confidence 25677888888999999999996 345444421 11221 1357888999998 7999999888 43 4
Q ss_pred HHHHHHHHHH
Q psy14428 409 RIMSQLKILI 418 (583)
Q Consensus 409 ~li~~l~~~~ 418 (583)
++.+++.+..
T Consensus 245 el~kkin~aV 254 (413)
T COG0112 245 ELAKKINSAV 254 (413)
T ss_pred HHHHHhhhhc
Confidence 7777777643
No 357
>KOG1360|consensus
Probab=97.90 E-value=0.00061 Score=69.26 Aligned_cols=206 Identities=13% Similarity=0.131 Sum_probs=121.9
Q ss_pred ChHHHHHHHHHhcc-CC-C---CC-CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCC
Q psy14428 183 LPSVKEAERRIYEK-NL-D---HE-YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYP 256 (583)
Q Consensus 183 ~~~v~~a~~~~~~~-~~-~---~~-Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~ 256 (583)
-+.+.+|+.+.++. +. . .+ -+...-...|.+.+|++.++.-..-+ ....+ ++.+.-. .|....+
T Consensus 187 Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlF--sSCfV-----ANDstLf---tLak~lp 256 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLF--SSCFV-----ANDSTLF---TLAKKLP 256 (570)
T ss_pred ChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeee--eeeee-----ccchHHH---HHHHHCC
Confidence 35777777776654 10 0 00 11233346899999999876432111 11222 2222211 3444555
Q ss_pred CCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q psy14428 257 GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-PERSILFLQTSSHNPTGVDLSEDQWRQL 335 (583)
Q Consensus 257 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~~s~~~~~~l 335 (583)
|-+|.-.+--......-++..++.-.- + .. + |++.|++.|++. ...++++-.-+-|.=+|.+-+.| +|
T Consensus 257 -gcei~SD~gNHASMI~GIrns~v~K~I--F-rH-N---D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcple---el 325 (570)
T KOG1360|consen 257 -GCEIFSDEGNHASMIQGIRNSRVPKHI--F-RH-N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLE---EL 325 (570)
T ss_pred -CcEEeccccchHHHHHHhhhcCCccee--e-cc-C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHH---HH
Confidence 555544443344444444555543222 2 11 2 889999988776 34578888888888899988855 45
Q ss_pred HHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH-hcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 336 AVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK-EVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 336 ~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
++++.+||.+-..||++.-=-|++... -+..-.. ...--|..+++.|.||.-| ||+.+ . ..+++.+
T Consensus 326 cDvah~yGAiTFlDEVHAVGlYG~rGa---GvgerdGvm~kvDiIsGTLgKafGcVG---GYIAa--t-----~~LvDmi 392 (570)
T KOG1360|consen 326 CDVAHKYGAITFLDEVHAVGLYGPRGA---GVGERDGVMHKVDIISGTLGKAFGCVG---GYIAA--T-----RKLVDMI 392 (570)
T ss_pred HHHHHHhCceeeeehhhhhccccCCCC---CccccCCcchhhhhcccchhhhccccc---ceehh--h-----hhHHHHH
Confidence 888999999999999986544442100 0000000 0112478899999999877 99998 5 4789988
Q ss_pred HHHHhccc
Q psy14428 415 KILIRGFY 422 (583)
Q Consensus 415 ~~~~~~~~ 422 (583)
+....-..
T Consensus 393 RSyAaGFI 400 (570)
T KOG1360|consen 393 RSYAAGFI 400 (570)
T ss_pred HHhcCceE
Confidence 87754443
No 358
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=97.88 E-value=0.00069 Score=71.76 Aligned_cols=185 Identities=13% Similarity=0.050 Sum_probs=109.9
Q ss_pred CChH-HHHHHHHHhccCCCCCCCC--CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC-CchhHHHHHHHHHHHhCCC
Q psy14428 182 VLPS-VKEAERRIYEKNLDHEYAN--IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI-SGSGSLRVGTAFLERFYPG 257 (583)
Q Consensus 182 ~~~~-v~~a~~~~~~~~~~~~Y~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~-G~~~al~l~~~~l~~~~~~ 257 (583)
+++. +.+++.+..... .+..+ ..=+.+.|+.++++++. -++++|++ +. +++.+++.+. ..+..+
T Consensus 23 ~~~~~v~~a~~~~~~~~--~hr~~~f~~~~~~~r~~l~~l~~~-----~~~~~v~~--~~gs~T~~~~~~~---~~l~~~ 90 (378)
T PRK03080 23 KRPGWQLEALADALLGR--SHRQKPVKALLKRVIEGTRELLSL-----PEGYEVGI--VPGSDTGAWEMAL---WSLLGA 90 (378)
T ss_pred CChHHHHHHHHhhhccc--CcCCHHHHHHHHHHHHHHHHHhCC-----CCCceEEE--ECCchHHHHHHHH---HhcCCC
Confidence 3445 777766433210 01111 12235667777777642 13457888 75 7899999863 333442
Q ss_pred -CCEEEEcCCCChhhHH--HHhhcCC-eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q psy14428 258 -VKTVYFPTPTWNGHVR--FCTDSRL-NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWR 333 (583)
Q Consensus 258 -gd~Vlv~~P~y~~~~~--~~~~~G~-~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~ 333 (583)
++.|++ +=.|+.-.. +.+..|+ ++..++. +. +..+|++. + .. ++++.+++..|.||...+.+++
T Consensus 91 ~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~-~~-g~~~d~~~----i---~~-~~~V~~~h~~t~tG~~~pi~~I- 158 (378)
T PRK03080 91 RRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEA-DY-GSLPDLSA----V---DF-DRDVVFTWNGTTTGVRVPVARW- 158 (378)
T ss_pred CcceEEE-eCHHHHHHHHHHHhhcCCCCceEecc-CC-CCCCCHhh----c---CC-CCCEEEEecCCccceeccchhh-
Confidence 445554 323443222 2356788 8888876 32 23455544 2 22 4567889999999999986555
Q ss_pred HHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccc-cCccceEEEEEcCCchhHHHHHH
Q psy14428 334 QLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGL-YGERVGTFSVLTPTSDETERIMS 412 (583)
Q Consensus 334 ~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l-~GlRiG~lv~~~p~~~~~~~li~ 412 (583)
++ +++|+++|+|-+-.--... ..+.. --+++.|.-|.++. +| +|++++ . +++++
T Consensus 159 --~~--~~~g~~~vVDa~qs~G~~p------idv~~------iD~~~~s~~K~l~~P~G--~g~l~v--~-----~~~~~ 213 (378)
T PRK03080 159 --IG--ADREGLTICDATSAAFALP------LDWSK------LDVYTFSWQKVLGGEGG--HGMAIL--S-----PRAVE 213 (378)
T ss_pred --cc--ccCCCeEEEecccccccCC------CCHHH------CcEEEEehhhhCCCCCc--eEEEEE--C-----HHHHH
Confidence 44 6789999999885433221 11211 13778888898853 55 699998 5 45666
Q ss_pred HHH
Q psy14428 413 QLK 415 (583)
Q Consensus 413 ~l~ 415 (583)
++.
T Consensus 214 ~~~ 216 (378)
T PRK03080 214 RLE 216 (378)
T ss_pred hhh
Confidence 654
No 359
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.83 E-value=0.00027 Score=80.94 Aligned_cols=182 Identities=16% Similarity=0.136 Sum_probs=115.7
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-C----CCCCEEEEcCCCChh
Q psy14428 199 DHEYAN---IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-Y----PGVKTVYFPTPTWNG 270 (583)
Q Consensus 199 ~~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~----~~gd~Vlv~~P~y~~ 270 (583)
.+.|.| .+|+.++...+.+++.+-.|.+.. .+ +-.++.++-......++.. + +..++|+++.-.+..
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~----Sl-~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgt 603 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITGFDAI----CM-QPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGT 603 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE----ee-cCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEeccccccc
Confidence 366777 889888887777777765554432 33 2223333432322233331 1 223567787755533
Q ss_pred hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q psy14428 271 HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDM 350 (583)
Q Consensus 271 ~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De 350 (583)
....+...|++++.++. |+ +..+|++++++.+++...++.++.+.+|++=. ++ .+.+++|+++|+++|+.++.|-
T Consensus 604 Npasa~~~GieVv~Vp~-D~-~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~G--v~-e~~V~eI~~iah~~Galv~vDg 678 (954)
T PRK12566 604 NPASAQMAGMRVVIVEC-DP-DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHG--VY-EEGIREICEVVHQHGGQVYMDG 678 (954)
T ss_pred CHHHHHHCCCEEEEecc-CC-CCCcCHHHHHHHhhccCCCEEEEEEEecCcCc--ee-cchHHHHHHHHHHcCCEEEEEe
Confidence 34557778999999999 64 46899999999986555677777777776544 33 5678999999999999999999
Q ss_pred cCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc----CccceEEEE
Q psy14428 351 AYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY----GERVGTFSV 399 (583)
Q Consensus 351 ~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~----GlRiG~lv~ 399 (583)
+.. ..... +.. +...+--|+.++.-|+|+.| |.-+|.+.+
T Consensus 679 A~~-~a~~~-------l~~-Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav 722 (954)
T PRK12566 679 ANL-NAQVG-------LAR-PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGV 722 (954)
T ss_pred eCh-hhccC-------CCC-hhhcCCCEEEecCCcccCcCccCCCCccchhhh
Confidence 873 11111 000 12335568888989988532 444555444
No 360
>KOG1404|consensus
Probab=97.81 E-value=0.0015 Score=66.46 Aligned_cols=262 Identities=13% Similarity=0.073 Sum_probs=151.8
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc--CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK--NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~--~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
+.+...+|+..|.+....|.- -|.+..++.+-+.. -....|... -..+|-+++++.+-.. -..+++ +
T Consensus 47 e~G~ryLD~f~Gi~tvslGHc--hP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~P~~------l~~vfF--~ 115 (442)
T KOG1404|consen 47 EEGRRYLDAFGGIVTVSLGHC--HPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKLPGD------LKVVFF--V 115 (442)
T ss_pred CCCceeehhhCCeEEEEcCCC--ChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhCCCC------ceEEEE--e
Confidence 456677898888887766643 35555554443322 123445432 2467777777766432 235888 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh-HHHHhhcCCeEEEEecc------------cCCC--CCCC-----h
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH-VRFCTDSRLNVGAYRYF------------DNKT--NGLD-----F 297 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~-~~~~~~~G~~~~~v~~~------------d~~~--~g~d-----~ 297 (583)
++|++|.+++..+.+.....-| ++--.-+|... ...+...|......++. |+.. ++=+ -
T Consensus 116 nsGsEANelal~mar~Yt~~~d-iIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~ 194 (442)
T KOG1404|consen 116 NSGSEANELALKMARLYTGNLD-IIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEAS 194 (442)
T ss_pred cCCchHHHHHHHHHHHhcCCce-EEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhH
Confidence 9999999998655555555334 44444455443 33333333332222210 0000 0001 1
Q ss_pred ----hhHHHHHHcCCCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH
Q psy14428 298 ----AGMMEDIKAMPERSILFLQTSSHNPTGV--DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA 371 (583)
Q Consensus 298 ----~~l~~~l~~~~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~ 371 (583)
+.+++.+....+.+.+-++.-+---+|. .+++--+++..+.|+++|.+.|.||+-..|..-+ .+-.|
T Consensus 195 d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG------~~wgf- 267 (442)
T KOG1404|consen 195 DRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG------HMWGF- 267 (442)
T ss_pred HHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc------ccccc-
Confidence 3333344333444455444444433442 3566789999999999999999999998887654 22222
Q ss_pred HhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH-hccccCCChHHHHHHHH---HhCChhhhhhhh
Q psy14428 372 KEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI-RGFYSNPPIHGARIVTE---ILSDPKLKAQCD 447 (583)
Q Consensus 372 ~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~-~~~~~~~s~~~q~~~~~---~l~~~~~~~~~~ 447 (583)
+..+-+==|-|++|.+| .|+-+|.++. . +++.+.+.+.. -...++.++++-.+..+ .++++.+.++..
T Consensus 268 e~h~v~PDIvTmAKgiG-nG~Pl~AVvt--t-----~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa 339 (442)
T KOG1404|consen 268 ESHGVVPDIVTMAKGIG-NGFPLGAVVT--T-----PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAA 339 (442)
T ss_pred cccCCCccHHHHHhhcc-CCCcceeeec--C-----HHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHH
Confidence 22333445678899999 9999999998 5 57888888765 33445555555554444 444554444443
Q ss_pred h
Q psy14428 448 E 448 (583)
Q Consensus 448 ~ 448 (583)
.
T Consensus 340 ~ 340 (442)
T KOG1404|consen 340 E 340 (442)
T ss_pred H
Confidence 3
No 361
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.79 E-value=0.0041 Score=67.24 Aligned_cols=248 Identities=8% Similarity=0.011 Sum_probs=124.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHH--HHHHHhccC-----CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKE--AERRIYEKN-----LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~--a~~~~~~~~-----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
+...+|+..|.+....|.- .|.+.+ ++.+.+..- ....| .. +....+++.+.+..+ +-.-+++.+
T Consensus 44 G~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~ql~~l~~~~~~~~~~-~~----~~~~~la~~l~~~~~-p~~~~~v~f 115 (443)
T PRK08297 44 GRRYLDMFTFFASSALGMN--HPALADDPEFRAELGRAALNKPSNSDV-YT----VEMARFVDTFARVLG-DPELPHLFF 115 (443)
T ss_pred CCEeeecccCHhhhcCCCC--ChHHhhHHHHHHHHHHhhhhccccCCc-CC----HHHHHHHHHHHhhcC-CCCCCEEEE
Confidence 4456777766665555543 245555 554444320 01111 11 222334443332211 112368999
Q ss_pred EecCCchhHHHHHHHHHHHhC------C----C-CCEEEEcCCCChhhHHHHhh-cCCeE-----------EEEecccCC
Q psy14428 235 VQGISGSGSLRVGTAFLERFY------P----G-VKTVYFPTPTWNGHVRFCTD-SRLNV-----------GAYRYFDNK 291 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~------~----~-gd~Vlv~~P~y~~~~~~~~~-~G~~~-----------~~v~~~d~~ 291 (583)
+++|++|.+.+..+.+... . + ..+|+...-+|.+....... .|... ..++.....
T Consensus 116 --~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK08297 116 --VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLR 193 (443)
T ss_pred --eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCC
Confidence 9999999998766654331 1 1 25688888887766432222 22110 001100000
Q ss_pred ----CCC---C------ChhhHHHHHHcCCCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC
Q psy14428 292 ----TNG---L------DFAGMMEDIKAMPERSILFLQTSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS 357 (583)
Q Consensus 292 ----~~g---~------d~~~l~~~l~~~~~~~~~i~i~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~ 357 (583)
... . +++.+++.+.+...+..++++-.-+---| ...+++-+++|.++|++||+++|.||++..|..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR 273 (443)
T PRK08297 194 FPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL 273 (443)
T ss_pred CCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 000 0 13344555554344455555432222234 347889999999999999999999999998854
Q ss_pred CCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH-----HhccccCCChHHHHH
Q psy14428 358 GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL-----IRGFYSNPPIHGARI 432 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~-----~~~~~~~~s~~~q~~ 432 (583)
.+ .......+ +-.+.++ +|+|.++ +|.+++ . +++.+.+... .....++.++++..+
T Consensus 274 tG---~~~a~~~~-gv~PDiv---~~gK~l~-----~~a~l~--~-----~~i~~~~~~~~~~~~~~~~T~~gnpl~~aa 334 (443)
T PRK08297 274 TG---TAWAYQQL-GVRPDIV---AFGKKTQ-----VCGIMA--G-----RRVDEVEDNVFAVSSRINSTWGGNLVDMVR 334 (443)
T ss_pred cc---hHHHHHhc-CCCCCEE---Eeccccc-----ccceec--c-----hHHHHhhhhhccCccccCCCCCccHHHHHH
Confidence 43 11122221 2223344 4799874 344444 2 2332221111 122344567777666
Q ss_pred HHHHhC
Q psy14428 433 VTEILS 438 (583)
Q Consensus 433 ~~~~l~ 438 (583)
+...++
T Consensus 335 a~a~L~ 340 (443)
T PRK08297 335 ARRILE 340 (443)
T ss_pred HHHHHH
Confidence 666554
No 362
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.70 E-value=0.0079 Score=64.84 Aligned_cols=193 Identities=9% Similarity=-0.038 Sum_probs=103.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHH--HHHHHHhccCCCCCCCC-CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVK--EAERRIYEKNLDHEYAN-IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~--~a~~~~~~~~~~~~Y~~-~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
.+...+|+..|.+....|.- .+.+. +++.+.+.......... ....+.+ ..+++.+.+..+ .-..+++.. +
T Consensus 36 dG~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~-~~~~~~v~f--~ 109 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMN--HPALVDDLAFRARLGAAAVNKPSNSDVYTVAM-ARFVDTFARVLG-DPALPHLFF--I 109 (431)
T ss_pred CCCChhhcccChhhcCCCCC--ChhhhHHHHHHHHHHHhhhcccccCCCCCHHH-HHHHHHHHHhcC-CCCcCEEEE--e
Confidence 35567888777776666643 24554 55555443310000011 1112233 333333322110 112368888 9
Q ss_pred CCchhHHHHHHHHHHHhCC-----------CCCEEEEcCCCChhhHHHHh-hcCCe-E------------EEEecc----
Q psy14428 238 ISGSGSLRVGTAFLERFYP-----------GVKTVYFPTPTWNGHVRFCT-DSRLN-V------------GAYRYF---- 288 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~-----------~gd~Vlv~~P~y~~~~~~~~-~~G~~-~------------~~v~~~---- 288 (583)
++|++|.+.+..+.+.... ++.+|+...-+|.+...... ..|.. . +..|..
T Consensus 110 ~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 189 (431)
T TIGR03251 110 EGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPL 189 (431)
T ss_pred CCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCc
Confidence 9999999987666554420 13678888877766543222 11211 0 001100
Q ss_pred cCCCCC-C------ChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 289 DNKTNG-L------DFAGMMEDIKAMPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 289 d~~~~g-~------d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
+.+... . +++.+++.++....+..++++.--+.-.|.. .+++-+++|.++|++||+++|.||++..|...+
T Consensus 190 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG 268 (431)
T TIGR03251 190 DAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTG 268 (431)
T ss_pred cccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccc
Confidence 000000 0 1333444554434555566654444445644 688999999999999999999999999886554
No 363
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.68 E-value=0.0032 Score=68.18 Aligned_cols=192 Identities=13% Similarity=0.078 Sum_probs=106.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHH-hccCC--CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRI-YEKNL--DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~-~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
.+...+|+..|.+....|.- .+.+.+++.+. ..... ...|.. ....+|-+.+++.+.... +-.-+++.+ +
T Consensus 56 dG~~ylD~~sg~~~~~lGh~--~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~--p~~~~~v~f--~ 128 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYN--NPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVA--PKGQDQVWT--G 128 (464)
T ss_pred CCCEEEEccCCHhhhcCCCC--CHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhC--CCCcCEEEE--e
Confidence 45577899888887766653 46777776652 22211 111211 111233333333222111 112268999 9
Q ss_pred CCchhHHHHHHHHHHHhCC-----------------------CC---CEEEEcCCCChhhHHHHhh-cCC----------
Q psy14428 238 ISGSGSLRVGTAFLERFYP-----------------------GV---KTVYFPTPTWNGHVRFCTD-SRL---------- 280 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~-----------------------~g---d~Vlv~~P~y~~~~~~~~~-~G~---------- 280 (583)
++|++|.+.+..+.+.... .| ..|+...-+|.+....... .|.
T Consensus 129 ~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~ 208 (464)
T TIGR00699 129 MSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPA 208 (464)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCC
Confidence 9999999987665543210 11 2688888888765432221 111
Q ss_pred -eEEEEecccCC-CCC-----------CChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEE
Q psy14428 281 -NVGAYRYFDNK-TNG-----------LDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYP 346 (583)
Q Consensus 281 -~~~~v~~~d~~-~~g-----------~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~i 346 (583)
....+|..... ..+ -+++.+++.+++......++++-.-+.-.|... +++-+++|.++|+++|+++
T Consensus 209 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lL 288 (464)
T TIGR00699 209 FDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAF 288 (464)
T ss_pred CCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 11122221000 000 024456666654334455555544444456655 7899999999999999999
Q ss_pred EEeccCCCCCCCC
Q psy14428 347 FFDMAYLGLTSGD 359 (583)
Q Consensus 347 I~De~Y~~l~~~~ 359 (583)
|.||+...|...+
T Consensus 289 I~DEV~tGfGrtG 301 (464)
T TIGR00699 289 IVDEVQTGVGATG 301 (464)
T ss_pred EEeeeeeCCCCCc
Confidence 9999998886543
No 364
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.59 E-value=0.0023 Score=74.86 Aligned_cols=193 Identities=12% Similarity=0.073 Sum_probs=120.6
Q ss_pred ccCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCC-----CCC----HHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 167 NLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANI-----GGD----AKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 167 ~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~-----~G~----~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
-++.|.++. ..|+.+.+.+.+ ++. ...|+|. ||. .++++.++++.+ .++.|+.+
T Consensus 80 ~ig~G~y~~-----~~P~vi~~~i~~---~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG------~~~anaSl-- 143 (954)
T PRK05367 80 YIGQGYYGT-----HTPPVILRNILE---NPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTG------LEIANASL-- 143 (954)
T ss_pred ccCCCCCCC-----cCcHHHHHHHHh---CcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHC------CChhhccc--
Confidence 356677642 244555443332 321 3456664 454 455666666654 56788889
Q ss_pred cCCchhHHHHHHHHHHHhCCC-CCEEEEcCCCChhhHHHH----hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCc
Q psy14428 237 GISGSGSLRVGTAFLERFYPG-VKTVYFPTPTWNGHVRFC----TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERS 311 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~-gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~ 311 (583)
+.+++.+.+.+...++ +.+. +|+|++++-.|+.....+ +..|++++.++. +. |.+ ...+
T Consensus 144 ~d~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~-~~-----d~~---------~~~~ 207 (954)
T PRK05367 144 LDEATAAAEAMALAKR-VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDA-AK-----ALD---------HDDV 207 (954)
T ss_pred cccHHHHHHHHHHhhh-hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecC-cc-----CCC---------cccE
Confidence 8999999887633322 2331 489999999999887654 557999999987 33 111 1234
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc-----
Q psy14428 312 ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN----- 386 (583)
Q Consensus 312 ~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~----- 386 (583)
..+++.+| |-+|.+.+ +++|++.|+++|+++++|-.-.-+.... + +.+.+--|+++|.-|.
T Consensus 208 ~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l~------~----pge~GaDi~vgs~qkfg~P~g 273 (954)
T PRK05367 208 FGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTLLT------P----PGEMGADIAVGSAQRFGVPMG 273 (954)
T ss_pred EEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCCC------C----hhhcCCCEEEeeCcccCCCCC
Confidence 44555555 77998885 7788999999999999975332222211 1 1233456777777776
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
||-|| .|++.+ . +++++.+
T Consensus 274 ~GGP~--aGflav--r-----~~~~r~l 292 (954)
T PRK05367 274 FGGPH--AAYFAV--R-----DAYKRSM 292 (954)
T ss_pred CCCCC--EEEEEE--C-----HHHHhhC
Confidence 65565 899998 5 3555554
No 365
>KOG2862|consensus
Probab=97.59 E-value=0.016 Score=57.55 Aligned_cols=158 Identities=13% Similarity=0.168 Sum_probs=101.0
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC-Chh-hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT-WNG-HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~-y~~-~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
.-+++.++ |+.+++.+ +..+..|||.|++..-. |.. +....+.+|++|..++. |. .+...++.+.+++.+
T Consensus 69 ~tf~isgs-Gh~g~E~a---l~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~-~~-G~~~~le~i~~~lsq-- 140 (385)
T KOG2862|consen 69 QTFVISGS-GHSGWEAA---LVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEA-DI-GQAVPLEEITEKLSQ-- 140 (385)
T ss_pred ceEEEecC-CcchHHHH---HHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEec-Cc-ccCccHHHHHHHHHh--
Confidence 43443333 45677774 44555679999887665 553 46788899999999977 43 467899999999976
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcC-cEEEEecCcccc
Q psy14428 309 ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVG-QLCLAQSFSKNM 387 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~-~vi~i~S~SK~~ 387 (583)
.+.++++++.-.--||+.-+ -+..+-++|++|+.++++|-+-+-=..+ +. .|+.+ .+.|-+| -|.+
T Consensus 141 h~p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaSlggt~--------F~--mDewgVDvaytgS-QKaL 207 (385)
T KOG2862|consen 141 HKPKAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVASLGGTE--------FE--MDEWGVDVAYTGS-QKAL 207 (385)
T ss_pred cCCceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEechhhcCCcc--------ce--ehhhcccEEEecc-hhhc
Confidence 45567777777777887655 2344566788999999999986421110 10 13322 3444443 5777
Q ss_pred cc-cCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 388 GL-YGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 388 ~l-~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
+. +|+-+ +.. + +...+++++.+
T Consensus 208 ~aP~GLsi--isf--S-----~ka~~~~~~rK 230 (385)
T KOG2862|consen 208 GAPAGLSI--ISF--S-----DKALEAIRDRK 230 (385)
T ss_pred CCCCCcce--eec--C-----HHHHHHHhhcc
Confidence 65 46544 333 3 35666776653
No 366
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.48 E-value=0.0002 Score=73.23 Aligned_cols=213 Identities=15% Similarity=0.090 Sum_probs=42.3
Q ss_pred CCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCC
Q psy14428 178 GKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG 257 (583)
Q Consensus 178 ~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~ 257 (583)
|.....+.+.+++.+.......+.|.-..|-..-|..-.+.+-.. -...+.-++ ++....|+.+ ++..+..
T Consensus 14 GRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~---ltgAeaA~V--vNnnaAAv~L---~l~~la~- 84 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCE---LTGAEAALV--VNNNAAAVLL---ALNTLAK- 84 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc---ccccccccc--cccccccccc---ccccccc-
Confidence 333345666666666655444555644434332222221111111 123456667 6667777776 4555665
Q ss_pred CCEEEEcCCC---Ch---hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC--CCCCCH
Q psy14428 258 VKTVYFPTPT---WN---GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPT--GVDLSE 329 (583)
Q Consensus 258 gd~Vlv~~P~---y~---~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPT--G~~~s~ 329 (583)
|.+|++..=. +. ....+++..|++++.|-.. + .-.+++.++++ ++++.+++-.++.|-. |..- .
T Consensus 85 ~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt-N---~t~~~Dye~AI---~e~Ta~ll~Vh~Sn~~i~GFt~-~ 156 (367)
T PF03841_consen 85 GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT-N---RTHLSDYEKAI---TENTAALLKVHTSNFRIQGFTG-E 156 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccc-c---ccccccccccc---cccccccccccccccccccccc-c
Confidence 7777765322 22 2456788889999888763 2 22566777777 6788888777777763 3222 2
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCC---CCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchh
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLT---SGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDE 406 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~---~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~ 406 (583)
-.++++++++++|++++|+|-.=+-+. .-+. .+.+.++.+.+ .+--+++.|=-|.+| |-..|.+++ .
T Consensus 157 ~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl-~~Ep~v~~~~~-~GaDlV~fSGdKlLG--GPQaGiI~G--k---- 226 (367)
T PF03841_consen 157 VSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGL-PDEPTVQEYLA-AGADLVTFSGDKLLG--GPQAGIIVG--K---- 226 (367)
T ss_dssp ----HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCC-CT-SEEEEETTSSSS--S-S-EEEEE--E----
T ss_pred ccHHHHHHHHhhcCCcEEEECCCCCCcCcccccC-ccccHHHHHhh-cCCCEEEEECCCcCC--CCCeEEEEe--C----
Confidence 256788999999999999998752221 0010 01223433322 234577788899987 566899999 6
Q ss_pred HHHHHHHHHHHH
Q psy14428 407 TERIMSQLKILI 418 (583)
Q Consensus 407 ~~~li~~l~~~~ 418 (583)
+++|+++++..
T Consensus 227 -k~lI~~lk~~p 237 (367)
T PF03841_consen 227 -KELIEKLKKHP 237 (367)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHhhCC
Confidence 68999998753
No 367
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.44 E-value=0.0063 Score=67.69 Aligned_cols=165 Identities=12% Similarity=0.044 Sum_probs=111.6
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC--C------
Q psy14428 185 SVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY--P------ 256 (583)
Q Consensus 185 ~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~--~------ 256 (583)
.+.+.+.... +.....|....+...+.+.+.+++.+..|.+ +..=.+ |+||+.|...+..+.+... +
T Consensus 99 ila~~~a~~~-N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~--TsGGT~ANl~aL~~AR~~k~~p~a~~~~ 173 (608)
T TIGR03811 99 ILAYNYAMLW-NGNNVAYESSPATSQMEEEVGKEFATLMGYK--NGWGHI--VADGSLANLEGLWYARNIKSLPFAMKEV 173 (608)
T ss_pred HHHHHHHHHh-CCCCCccccCchHHHHHHHHHHHHHHHhCCC--CCCeEE--eCChHHHHHHHHHHHHHhhhccchhhhc
Confidence 3334434333 3224455566678899999999998877764 234446 8999998765432322211 0
Q ss_pred -----------------------------------------CC------CEEEEcCCCChhhHHHHhhcCC---eEEEEe
Q psy14428 257 -----------------------------------------GV------KTVYFPTPTWNGHVRFCTDSRL---NVGAYR 286 (583)
Q Consensus 257 -----------------------------------------~g------d~Vlv~~P~y~~~~~~~~~~G~---~~~~v~ 286 (583)
+| -+|+++.-........+...|+ +++.||
T Consensus 174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vp 253 (608)
T TIGR03811 174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVP 253 (608)
T ss_pred cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEee
Confidence 00 0467777666667788888888 689999
Q ss_pred cccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCe--EEEEeccCCCCC
Q psy14428 287 YFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHL--YPFFDMAYLGLT 356 (583)
Q Consensus 287 ~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i--~iI~De~Y~~l~ 356 (583)
+ |+ ++.+|++.|++.|++. ..++.+++-+-..-.+|.+=+.+++.+|++.++++++ ++-+|-+|+.+.
T Consensus 254 v-D~-~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 254 V-DS-NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred c-CC-CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence 9 54 4789999999988653 3344556666777788877776666666666688898 699999999863
No 368
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=97.44 E-value=0.005 Score=64.75 Aligned_cols=188 Identities=7% Similarity=-0.084 Sum_probs=106.8
Q ss_pred CCChHHHHHHHHHhccCC-CCCCCC--CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC-chhHHHHHHHHHHHhCC
Q psy14428 181 YVLPSVKEAERRIYEKNL-DHEYAN--IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS-GSGSLRVGTAFLERFYP 256 (583)
Q Consensus 181 ~~~~~v~~a~~~~~~~~~-~~~Y~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G-~~~al~l~~~~l~~~~~ 256 (583)
..++.+.+++......-. ..++.+ ..-+.+.|+.++++++.. +.++|++ +.| ++.+++.+ +..+..
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~-----~~~~v~f--~~gs~T~a~~~~---~~~l~~ 82 (361)
T TIGR01366 13 KVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLP-----DGYEVIL--GNGGATAFWDAA---TFGLIE 82 (361)
T ss_pred CCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCC-----CCceEEE--ECCchhHHHHHH---HHhccc
Confidence 356777777553210000 112222 223466788888887521 2347777 655 99999986 333333
Q ss_pred CCCEEEEcCCCCh-hhHHHHhhc--CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q psy14428 257 GVKTVYFPTPTWN-GHVRFCTDS--RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWR 333 (583)
Q Consensus 257 ~gd~Vlv~~P~y~-~~~~~~~~~--G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~ 333 (583)
++.+.+..=.|. .+...+... +.++..++. +. +..++. .+ .++++++.++...|.||...+.+++
T Consensus 83 -~~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~-~~-~~~~~~-----~~---~~~~~lV~~~h~et~tG~~~pi~~I- 150 (361)
T TIGR01366 83 -KKSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTA-DP-GSAPEP-----QA---DPGVDVIAWAHNETSTGVAVPVRRP- 150 (361)
T ss_pred -ccccEEecCHHHHHHHHHHHhhhccCCceEEec-CC-CCCCCC-----cc---CCCCCEEEEcccCCccceecccccc-
Confidence 233333332343 223333331 235666665 32 222222 12 5688999999999999999997654
Q ss_pred HHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHH
Q psy14428 334 QLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQ 413 (583)
Q Consensus 334 ~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~ 413 (583)
++++++++|+|-+-.--... ..+.. --+++.|--|.+|.||- ++.+++ + ++++++
T Consensus 151 -----~~~~g~~~iVDavqs~g~~~------idv~~------~D~~~~s~~K~lg~~~G-l~~~~~--s-----~~~~~~ 205 (361)
T TIGR01366 151 -----EGSDDALVVIDATSGAGGLP------VDIAE------TDVYYFAPQKNFASDGG-LWLAIM--S-----PAALER 205 (361)
T ss_pred -----cccCCCeEEEEcCccccCCC------CCHHH------CCEEEEEchhhcCCCCc-eEEEEE--C-----HHHHhh
Confidence 47899999999985433211 11211 23577899999998753 555555 4 356665
Q ss_pred HH
Q psy14428 414 LK 415 (583)
Q Consensus 414 l~ 415 (583)
+.
T Consensus 206 ~~ 207 (361)
T TIGR01366 206 IE 207 (361)
T ss_pred hh
Confidence 54
No 369
>PLN02452 phosphoserine transaminase
Probab=97.39 E-value=0.018 Score=60.54 Aligned_cols=228 Identities=11% Similarity=0.061 Sum_probs=125.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC-Chh-hHHHHhhcCCeEEEEec
Q psy14428 210 KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT-WNG-HVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 210 ~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~-y~~-~~~~~~~~G~~~~~v~~ 287 (583)
++-+.+.+.+++-.+++- ..+|+++ ..||+.+++.+ ...+.++|+++++..-+ |.. +...++.+|...+....
T Consensus 52 ~i~~~~~~~L~~l~~~p~-~y~v~~l-~Gsgt~~~ea~---~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~ 126 (365)
T PLN02452 52 SIIQKAEADLRELLDIPD-NYEVLFL-QGGASTQFAAI---PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG 126 (365)
T ss_pred HHHHHHHHHHHHHhCCCC-CceEEEE-eCccHHHHHHH---HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec
Confidence 344444444444443321 1245552 56678888874 44566668988877655 432 34566777764433322
Q ss_pred ccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH
Q psy14428 288 FDN-KTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS 366 (583)
Q Consensus 288 ~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~ 366 (583)
.+. ...-++++.+ + ..+....+.++...-.||+.+.. +.++. ++++|+|-+-.-.... ..
T Consensus 127 ~~~~~~~~~~~~~~----~-~~~~~~~v~~~hnETstGv~~~~--~~~i~------~~~lvVDa~Ss~g~~p------id 187 (365)
T PLN02452 127 KDEKYTKIPSVSEW----E-LTPDAKFVHICANETIHGVEFKD--YPDVG------NVPLVADMSSNFLSKP------VD 187 (365)
T ss_pred CCCCCCCCCChHHc----C-CCCCCcEEEECCCCCCCcEecCc--ccccC------CCeEEEECCccccCcc------cC
Confidence 111 0112344443 1 13456777777777899986542 33332 3789999885433211 11
Q ss_pred HHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhh
Q psy14428 367 LRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQC 446 (583)
Q Consensus 367 ~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 446 (583)
+ +.. .+++ .|.-|.+|.|| +|.+++ . +++++++... .+...++...
T Consensus 188 v----~~~-~v~~-~saqK~lGP~G--l~~v~v--r-----~~~l~~~~~~-------~~~~~~~~~~------------ 233 (365)
T PLN02452 188 V----SKY-GVIY-AGAQKNVGPSG--VTIVII--R-----KDLIGNARPI-------TPGMLDYKIH------------ 233 (365)
T ss_pred H----HHc-CEEE-EecccccCCCC--eEEEEE--c-----HHHHhhcccC-------CCchhhHHHH------------
Confidence 2 222 2444 59999999899 688888 5 4666664311 1111111000
Q ss_pred hhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhc
Q psy14428 447 DETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFE---ECKGMSNRISSIREELKSKILDK 513 (583)
Q Consensus 447 ~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~---~l~~~~~~~~~~r~~l~~~L~~~ 513 (583)
.+. ...+..||..+.+.+...+. |.. .++.+.++.+++.+.+.+.|++.
T Consensus 234 ---------~~~--~s~~~TP~v~~i~~l~~aL~-------~l~~~gGl~~~~~r~~~~a~~l~~~l~~~ 285 (365)
T PLN02452 234 ---------AEN--DSLYNTPPCFGIYMCGLVFE-------DLLAQGGLKAMEKRNIRKADLLYDAIDES 285 (365)
T ss_pred ---------Hhc--CCccCChhHHHHHHHHHHHH-------HHHHccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 000 12334666666666655543 322 26778888899999999999874
No 370
>PLN02397 aspartate transaminase
Probab=97.39 E-value=0.00027 Score=76.08 Aligned_cols=72 Identities=56% Similarity=1.085 Sum_probs=62.4
Q ss_pred cceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 2 AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 2 ~~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
..+|+++|+||+.+...++..+.|+ .+|.+++|+|.+|..+++.+|.++..|++.++..-++|++.+.++++
T Consensus 118 ~~~~i~~g~Ga~~l~~~~~~~~~pG-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~ 189 (423)
T PLN02397 118 ATVQCLSGTGSLRLGAEFLARFYPG-STIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLK 189 (423)
T ss_pred EeeecccchHHHHHHHHHHHHhCCC-CEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHH
Confidence 3578999999999999888876677 58999999999999999999999999998776667899998877654
No 371
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.39 E-value=0.037 Score=63.92 Aligned_cols=252 Identities=13% Similarity=0.069 Sum_probs=136.6
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCC-CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGG-DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G-~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
..+|+..+.|....|.. ..+.+.+++.+.+.. +.|....+ .-+-...+|+.+.+.-+. -.-++|++ +++|++
T Consensus 366 ~ylD~~sg~w~~~lG~h-~~p~I~~Ai~~Qa~r---l~hv~~~~~~hepa~~LAe~L~~~~~~-~~l~rVff--s~sGSe 438 (817)
T PLN02974 366 QQFDACASWWTQGPDPT-LQPELARAVAYAAGR---YGHVMFPENVHEPALRAAELLLGGPGK-GWASRVFF--SDNGST 438 (817)
T ss_pred eEEEcchhHHHhCCCcC-CCHHHHHHHHHHHhh---CCccccCccCCHHHHHHHHHHHhccCC-CCCCEEEE--CCchHH
Confidence 45677666666554411 246777777766654 11211111 234445566666542110 01358999 999999
Q ss_pred HHHHHHHHHHH-hC---C--------------CCCEEEEcCCCChhhHH-HHhhcCC---------e-----EEEE--ec
Q psy14428 243 SLRVGTAFLER-FY---P--------------GVKTVYFPTPTWNGHVR-FCTDSRL---------N-----VGAY--RY 287 (583)
Q Consensus 243 al~l~~~~l~~-~~---~--------------~gd~Vlv~~P~y~~~~~-~~~~~G~---------~-----~~~v--~~ 287 (583)
|++.+..+... .. . +..+|+.-.-+|.+-.. .+...|. . ...+ |.
T Consensus 439 AvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~ 518 (817)
T PLN02974 439 AIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPT 518 (817)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCc
Confidence 99987665522 21 0 12357777777765322 2111110 0 0001 10
Q ss_pred ---cc-------CCC-----------CC-----CC------------hhhHHHHHHc----CCCCcEEEEeCCC--CCCC
Q psy14428 288 ---FD-------NKT-----------NG-----LD------------FAGMMEDIKA----MPERSILFLQTSS--HNPT 323 (583)
Q Consensus 288 ---~d-------~~~-----------~g-----~d------------~~~l~~~l~~----~~~~~~~i~i~~p--~NPT 323 (583)
.+ +.. +. ++ .+.+++.|++ ...+..+-++.-| +.--
T Consensus 519 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaG 598 (817)
T PLN02974 519 VGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAG 598 (817)
T ss_pred cccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCC
Confidence 00 000 00 01 1345555543 1222333334444 5666
Q ss_pred CCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEc
Q psy14428 324 GVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLT 401 (583)
Q Consensus 324 G~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~ 401 (583)
|..+ +++-+++|.++|++||+++|.||+.-.|..-+ ....... .+-.+.++ .++|.++ .| +-+|.+++
T Consensus 599 Gmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG---~~fa~e~-~gv~PDIi---~~gKgLt-gG~~Plaa~l~-- 668 (817)
T PLN02974 599 GMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG---VESAWEL-LGCKPDIA---CYAKLLT-GGLVPLAATLA-- 668 (817)
T ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc---chhhHHh-cCCCCCEE---eeccccc-CCCCccEEEEE--
Confidence 7654 78899999999999999999999999995544 1222222 12223333 4689998 89 69999999
Q ss_pred CCchhHHHHHHHHHHH------HhccccCCChHHHHHHHHHh
Q psy14428 402 PTSDETERIMSQLKIL------IRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 402 p~~~~~~~li~~l~~~------~~~~~~~~s~~~q~~~~~~l 437 (583)
. +++.+.+..- .-...++.++++..++.+.|
T Consensus 669 ~-----~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L 705 (817)
T PLN02974 669 T-----EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKAL 705 (817)
T ss_pred c-----HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHH
Confidence 6 5788877521 11224456666666654444
No 372
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.36 E-value=0.0078 Score=59.29 Aligned_cols=181 Identities=19% Similarity=0.197 Sum_probs=117.7
Q ss_pred CCCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC-ChhhHHH---
Q psy14428 200 HEYA-NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT-WNGHVRF--- 274 (583)
Q Consensus 200 ~~Y~-~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~-y~~~~~~--- 274 (583)
.+|. +..|-..|.+-.|+-++.+-. .-+.-+ ..++.|+..+ |-.++.|||+.+...=+ |.....+
T Consensus 58 tGYGydD~GRdtLe~vyA~vf~aE~a----~VRpq~---isGTHAI~~a---Lfg~LRpgDell~i~G~PYDTLeevIG~ 127 (416)
T COG4100 58 TGYGYDDLGRDTLERVYAQVFGAEAA----LVRPQI---ISGTHAIACA---LFGILRPGDELLYITGSPYDTLEEVIGL 127 (416)
T ss_pred CCCCccccchhHHHHHHHHHhccccc----eeeeee---ecchhHHHHH---HHhccCCCCeEEEecCCcchhHHHHhcc
Confidence 3443 456767777777777765321 112222 2378888875 44556669998754333 5555544
Q ss_pred -------HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCC----CCCHHHHHHHHHHHHh--
Q psy14428 275 -------CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGV----DLSEDQWRQLAVVVKQ-- 341 (583)
Q Consensus 275 -------~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~----~~s~~~~~~l~~~a~~-- 341 (583)
++..|+....+|+. . +..+|++.+.+.+ .++++++.+-. .+|. .++.+++++++++.++
T Consensus 128 rg~~~gSL~dfgi~Y~~v~Lt-~-~gkiD~~~v~~~i---~~~tkli~IQR---S~GY~~RpS~~I~eI~~~i~~vk~in 199 (416)
T COG4100 128 RGEGQGSLKDFGIKYKAVPLT-A-DGKIDIQAVKTAI---SDRTKLIGIQR---SKGYAWRPSLSIAEIEEMITFVKEIN 199 (416)
T ss_pred CCCCcccHHHhCcceeecccc-c-CCcccHHHHHHhc---CccceEEEEEe---ccCcCCCCcccHHHHHHHHHHHHhcC
Confidence 34556777788883 3 3689999999988 67888887732 2332 3788999999999986
Q ss_pred cCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc--ceEEEEEcCCchhHHHHHHHHHH
Q psy14428 342 RHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER--VGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 342 ~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR--iG~lv~~~p~~~~~~~li~~l~~ 416 (583)
.|+++.+|.+|++|.-.- .+... +--+..+|+-|+-| -|+- -||+++ . ++++++..-
T Consensus 200 pn~ivFVDNCYGEFvE~~---EPt~v-------GaDliAGSLIKNpG-GgiaktGGYiaG--k-----~~~ve~~~y 258 (416)
T COG4100 200 PNVIVFVDNCYGEFVEEK---EPTHV-------GADLIAGSLIKNPG-GGIAKTGGYIAG--K-----AELVEAAAY 258 (416)
T ss_pred CCEEEEEeccchhhhhcc---Ccccc-------chhhhccceeeCCC-Cceeeccceeec--h-----HHHHHhhce
Confidence 479999999999998543 11111 22356788888776 3331 268888 5 467776653
No 373
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=97.18 E-value=0.025 Score=59.53 Aligned_cols=134 Identities=13% Similarity=0.094 Sum_probs=84.4
Q ss_pred eEEEecCCchhHHHHHHHHHHHhC-CCCCEEEEcCCCChhh-H-HHHhhcCC-eEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 232 LAIVQGISGSGSLRVGTAFLERFY-PGVKTVYFPTPTWNGH-V-RFCTDSRL-NVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 232 I~i~~t~G~~~al~l~~~~l~~~~-~~gd~Vlv~~P~y~~~-~-~~~~~~G~-~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
+++ +.+|+++++.+ +..+. ++|+.|++.. .|..- . .+++.+|+ ++..+.. +.+..++++.++.
T Consensus 61 ~~l--~GsGT~a~Eaa---~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~----- 127 (374)
T TIGR01365 61 GIV--PASDTGAVEMA---LWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF----- 127 (374)
T ss_pred EEE--CCchHHHHHHH---HHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC-----
Confidence 555 78889999985 34444 4688998866 56554 4 78888999 4666654 2345677777642
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc
Q psy14428 308 PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 387 (583)
. +. ++++..--.||+..+.+ +++..+ ++.++|+|-+=+-...+ . .+ + +--+++.|--|.+
T Consensus 128 ~-~~--v~~vhnETSTGv~npv~---~i~~~~--~~~lliVDavSs~g~~~-----l-~~----d--~iDv~~tgsQK~L 187 (374)
T TIGR01365 128 K-ND--VVFTWNGTTSGVRVPNG---DFIPAD--REGLTICDATSAAFAQD-----L-DY----H--KLDVVTFSWQKVL 187 (374)
T ss_pred C-CC--EEEecCCCchheecccc---cccccc--CCCcEEEEccchhcCCC-----C-Ch----h--HCcEEEEechhcc
Confidence 1 11 44666666889888764 333211 47899999985433221 0 11 1 1346778889999
Q ss_pred cccCccceEEEE
Q psy14428 388 GLYGERVGTFSV 399 (583)
Q Consensus 388 ~l~GlRiG~lv~ 399 (583)
++|+- ++++++
T Consensus 188 ~~ppG-ls~v~v 198 (374)
T TIGR01365 188 GGEGA-HGMLIL 198 (374)
T ss_pred CCCCc-eEEEEE
Confidence 87651 466666
No 374
>PLN02672 methionine S-methyltransferase
Probab=97.11 E-value=0.0084 Score=70.43 Aligned_cols=213 Identities=13% Similarity=0.052 Sum_probs=140.8
Q ss_pred HhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH---hCCCCCEEEEcCCCCh
Q psy14428 193 IYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER---FYPGVKTVYFPTPTWN 269 (583)
Q Consensus 193 ~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~---~~~~gd~Vlv~~P~y~ 269 (583)
.+.+...+.|.|+.|...+|..||.|++..+++++++++|+| .+.-..|++.+.++..- +++.+.+-.+| +.|.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 489 (1082)
T PLN02672 413 ALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAVAIENALRLFSPRLAIVDEHLTRWLP-KKWL 489 (1082)
T ss_pred HHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHHHHHHHHHhhChHHHhhhhhhhccCC-HHHH
Confidence 333445678999999999999999999999999999999999 88888888775333211 12223233322 1232
Q ss_pred hhHHHHhhcC--------C--eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 270 GHVRFCTDSR--------L--NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 270 ~~~~~~~~~G--------~--~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
..+...| . .|+.-|. .-+.+.+.+++. +..+++..--+ +-..+....+.|++.+
T Consensus 490 ---~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 553 (1082)
T PLN02672 490 ---TSLAIENATSDSKSDDVITVIEAPR--------QSDLVIELIKKL--KPQVVVTGMAD---FEMRTSTAFEHLLNVT 553 (1082)
T ss_pred ---hHhhhhcccccCccCCeEEEEeCCC--------cchHHHHHHHhC--CCeEEEEeccc---hhhhhHHHHHHHHHHH
Confidence 3222222 1 2222221 112444555433 34455522111 3345667889999999
Q ss_pred HhcCeEEEEecc-CCCCCCCCCCCchHHHHHHHH--hcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 340 KQRHLYPFFDMA-YLGLTSGDFDKDAFSLRYFAK--EVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 340 ~~~~i~iI~De~-Y~~l~~~~~~~~~~~~~~~~~--~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
++.|..++.|+. |.++.... .+...++.+.. ...+..++.++-|+--.+.+-+.+++. .+ +.+.+.|.+
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~ 625 (1082)
T PLN02672 554 AEIGARLFLDISDHLELSSLP--GSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVIS--EN----EAVLKALSK 625 (1082)
T ss_pred HhhCcEEEEehhhheeeccCC--CcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEec--Cc----HHHHHHHHH
Confidence 999999999997 44554332 23334444432 234667888899988789999999997 43 589999999
Q ss_pred HHhccccCCChHHHHH
Q psy14428 417 LIRGFYSNPPIHGARI 432 (583)
Q Consensus 417 ~~~~~~~~~s~~~q~~ 432 (583)
.........+.++|.-
T Consensus 626 ~~~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 626 TGEVLEGRTAIISQFY 641 (1082)
T ss_pred HHHhhccchHHHHHHH
Confidence 9999999999999984
No 375
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.08 E-value=0.045 Score=58.16 Aligned_cols=263 Identities=11% Similarity=0.016 Sum_probs=143.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCC--CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLD--HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
.+...+|-..|.|....|.- .+.+.+++.+-+.. ... ...+... ..+|-+.+++..-+ -+-++|.. |
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~--~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~-----~~l~~vFf--~ 111 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHG--RPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPE-----GGLDHVFF--T 111 (449)
T ss_pred CCCEEEecccHHHHhhcCcC--CHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCC-----CCccEEEE--e
Confidence 45677888889988776653 46777777666654 111 1111111 44555555554431 11478999 9
Q ss_pred CCchhHHHHHHHHHHHh----CCCCC-EEEEcCCCChhhHHH--------------HhhcCCeEEEEecccC----C-CC
Q psy14428 238 ISGSGSLRVGTAFLERF----YPGVK-TVYFPTPTWNGHVRF--------------CTDSRLNVGAYRYFDN----K-TN 293 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~----~~~gd-~Vlv~~P~y~~~~~~--------------~~~~G~~~~~v~~~d~----~-~~ 293 (583)
.+|++|.+.+..+.... ..|.. +++.-..+|.+-.-. +...-..+..+|.... . +.
T Consensus 112 ~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~ 191 (449)
T COG0161 112 DSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGE 191 (449)
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCC
Confidence 99999999876554332 12222 377777777543211 1111111222222110 0 00
Q ss_pred C-----CChhhHHHHHHcCCCCcEEEEeCCC-CCC-CCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchH
Q psy14428 294 G-----LDFAGMMEDIKAMPERSILFLQTSS-HNP-TGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAF 365 (583)
Q Consensus 294 g-----~d~~~l~~~l~~~~~~~~~i~i~~p-~NP-TG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~ 365 (583)
+ -..+.+++.+.+..+.+.+-++.-| .-- .|+. +++.-++++.++|++||+++|.||+--.|..-+ ...
T Consensus 192 ~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG---~~F 268 (449)
T COG0161 192 GDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTG---KMF 268 (449)
T ss_pred ChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCc---hhh
Confidence 1 1245566666665534444334444 333 5644 466678999999999999999999998887665 111
Q ss_pred HHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH------HhccccCCChHHHHHHHH---H
Q psy14428 366 SLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL------IRGFYSNPPIHGARIVTE---I 436 (583)
Q Consensus 366 ~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~------~~~~~~~~s~~~q~~~~~---~ 436 (583)
....+ +-.+.++ +++|.+.-.=+-+|.+++ . +++.+.+..- +.. .++.++++-.++.+ +
T Consensus 269 A~e~~-gi~PDi~---~~aKGLT~GY~Pl~a~l~--~-----~~I~~~~~~~~~~~f~HG~-TYsghPlacAaAla~L~i 336 (449)
T COG0161 269 ACEHA-GIVPDIL---CLAKGLTGGYLPLSAVLT--S-----DRIYEAFSDGDAGAFMHGH-TYSGNPLACAAALANLDI 336 (449)
T ss_pred hhhhc-CCCCCee---eecccccccchhhHhHhh--h-----HHHHHHHhcccCCeeccCC-ccccCHHHHHHHHHHHHH
Confidence 11111 1223344 357877534456676666 4 4777777763 223 33445555444443 3
Q ss_pred hCChhhhhhhhh
Q psy14428 437 LSDPKLKAQCDE 448 (583)
Q Consensus 437 l~~~~~~~~~~~ 448 (583)
++++.+.++...
T Consensus 337 ~e~e~l~~~~~~ 348 (449)
T COG0161 337 LEEEDLLERVAE 348 (449)
T ss_pred HHhcCHHHHHHH
Confidence 444444444433
No 376
>KOG1357|consensus
Probab=97.07 E-value=0.0014 Score=67.78 Aligned_cols=190 Identities=13% Similarity=0.113 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCC-chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEec
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS-GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G-~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 287 (583)
.++.+.+|+|+... +-+++ ..| ++.+. .+..++.||.-|+-.+--......-++.-|+.+.-+.-
T Consensus 185 kelE~l~A~f~g~e-------~a~vF--~mGf~TNs~-----~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkH 250 (519)
T KOG1357|consen 185 KELEELVARFLGVE-------DAIVF--SMGFATNSM-----NIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRH 250 (519)
T ss_pred HHHHHHHHHhcCCc-------ceEEE--ecccccccc-----CcceeecCCcceeeccccchheeccccccCceEEEEec
Confidence 56777778877653 44555 333 11121 12234455766666555555555556667777766544
Q ss_pred ccCCCCCCChhhHHHHHHcC----C-----CCcEEEEeCCCCCCCCCCCCH----HHHHHHHHHHHhcCeEEEEeccCCC
Q psy14428 288 FDNKTNGLDFAGMMEDIKAM----P-----ERSILFLQTSSHNPTGVDLSE----DQWRQLAVVVKQRHLYPFFDMAYLG 354 (583)
Q Consensus 288 ~d~~~~g~d~~~l~~~l~~~----~-----~~~~~i~i~~p~NPTG~~~s~----~~~~~l~~~a~~~~i~iI~De~Y~~ 354 (583)
. |...+++.|+.. . +-.+++++ -+..+|. ..+.+++.+++++..+++.||+++-
T Consensus 251 N-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~ii------vegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSi 317 (519)
T KOG1357|consen 251 N-------DMQGLERLLRDAIVYGQPKTHRPWKKILIC------VEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSI 317 (519)
T ss_pred C-------CHHHHHHHHHHHHhcCCCCcCCcchheeee------eccceeccCeecccHHHHHhhccccEEEEeeccccc
Confidence 1 555666666542 1 22233332 3444433 3678999999999999999999875
Q ss_pred CCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhcc---ccCCChHHHH
Q psy14428 355 LTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGF---YSNPPIHGAR 431 (583)
Q Consensus 355 l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~---~~~~s~~~q~ 431 (583)
=..+.......-+.. .+..+-.|.+++|.|+||..| ||+.+ + +++++.++...... .+.++++.|+
T Consensus 318 GA~g~tGrgvce~~g-~d~~dvDImMGtftKSfga~G---Gyiag--s-----k~lid~lrt~s~~~~yat~~sppvaqq 386 (519)
T KOG1357|consen 318 GAMGATGRGVCEYFG-VDPEDVDIMMGTFTKSFGAAG---GYIAG--S-----KELIDYLRTPSPSALYATSLSPPVAQQ 386 (519)
T ss_pred cccCCCCcceeeccC-CCchhheeecceehhhccccc---ceecC--c-----HHHHhhhccCCCceeecccCChHHHHH
Confidence 444311000000000 133455788999999999888 89888 6 58888888643222 3456677777
Q ss_pred HHHHH
Q psy14428 432 IVTEI 436 (583)
Q Consensus 432 ~~~~~ 436 (583)
....+
T Consensus 387 ~~ssl 391 (519)
T KOG1357|consen 387 ILTSV 391 (519)
T ss_pred HHHHH
Confidence 66544
No 377
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=96.97 E-value=0.022 Score=66.76 Aligned_cols=190 Identities=12% Similarity=0.057 Sum_probs=113.4
Q ss_pred cCCccccCCCCCCCCChHHHHHHHHHhcc-CCCCCCCCC--CC----CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 168 LGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLDHEYANI--GG----DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 168 l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~~~Y~~~--~G----~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+.|.++. .+|+.+.+.+.+..+- .....|.+. +| +.++++.||++.+ ++++|+.+ +.++
T Consensus 108 iG~G~y~~-----~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG------~~~anaSL--~d~a 174 (993)
T PLN02414 108 IGMGYYNT-----HVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTG------LPMSNASL--LDEG 174 (993)
T ss_pred cCCCCCCc-----cCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhC------CChhhEee--cCCh
Confidence 45566542 2456665655443331 122334432 45 4667778888774 56899999 9999
Q ss_pred hhHHHHHHHHHHHhCC-CCCEEEEcCCCChhhHHHHh----hcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEE
Q psy14428 241 SGSLRVGTAFLERFYP-GVKTVYFPTPTWNGHVRFCT----DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFL 315 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~-~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~ 315 (583)
+.+.+.+.... .+.+ ++|+|++.+-.|+.+...++ ..|++++.+++ +.. + . ..+....++
T Consensus 175 TAaaea~~~a~-~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~-~~~----~------~---~~~~v~~vl 239 (993)
T PLN02414 175 TAAAEAMAMCN-NILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADE-KDF----D------Y---SSGDVCGVL 239 (993)
T ss_pred HHHHHHHHHHH-hcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecc-hhh----c------c---ccCceEEEE
Confidence 99999763322 2222 24789999999998876664 45999998887 321 1 0 011222333
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc---cccCc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM---GLYGE 392 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~---~l~Gl 392 (583)
+.+| |-+|.+.+ +++|+++|+++|+++++ -+. .+..... .+ +...+--|+++|--|.. |.-|=
T Consensus 240 vq~P-~~~G~v~d---v~~I~~~ah~~GaL~iV-aad-~lal~~l----~~----pge~GADi~vgsgqKwg~P~G~GGP 305 (993)
T PLN02414 240 VQYP-ATDGEVLD---YAEFVKNAHANGVKVVM-ATD-LLALTML----KP----PGEWGADIVVGSAQRFGVPMGYGGP 305 (993)
T ss_pred EecC-CCCeEEcC---HHHHHHHHHHcCCEEEE-EEC-HHHhcCC----CC----HhhccCcEEEECCCccccCCCCCCC
Confidence 3222 34899865 66778899999999988 221 2222211 01 12234556778766654 22345
Q ss_pred cceEEEE
Q psy14428 393 RVGTFSV 399 (583)
Q Consensus 393 RiG~lv~ 399 (583)
+.|++.+
T Consensus 306 ~aGflav 312 (993)
T PLN02414 306 HAAFLAT 312 (993)
T ss_pred CeeEEEE
Confidence 5899998
No 378
>KOG1383|consensus
Probab=96.64 E-value=0.019 Score=60.05 Aligned_cols=236 Identities=11% Similarity=0.040 Sum_probs=136.9
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCC-----CCEEEEcCCCChhhHHHHhhcCC
Q psy14428 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG-----VKTVYFPTPTWNGHVRFCTDSRL 280 (583)
Q Consensus 206 ~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~-----gd~Vlv~~P~y~~~~~~~~~~G~ 280 (583)
++..++..++.+++..-++-+ ++ .+-.-|.|+++++.+.-.--+..... -..++++.-.-..+....+..++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~--~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v 192 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP--SD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEV 192 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC--cc-ccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEE
Confidence 455666666666665544333 22 22223889999954432111111111 12444444445566667777889
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCeEEEEeccCCCCCCC-
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ-RHLYPFFDMAYLGLTSG- 358 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~-~~i~iI~De~Y~~l~~~- 358 (583)
++..+|+ ++.++.+|+..+.+.+ .+++++++..-|+-|+| +.|..++|.+++.+ ++++|-.|-+-+.|.-.
T Consensus 193 ~l~~V~~-~~~~~~~D~~k~~~~i---~eNti~lv~~~~~~p~G---~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~ 265 (491)
T KOG1383|consen 193 ELREVPL-DEGDYRVDPGKVVRMI---DENTIMLVGSLPNFPTG---EIEDVEKLADLLLEIWDIPIHVDACLGGFINPA 265 (491)
T ss_pred EEEeeec-cccceEecHHHHHHHh---ccceEEEEEEcCCCCcc---chhhHHHHHHHHHHHhCCceeecccCccccccc
Confidence 9999999 7788999999999888 78899999999999999 45677777888888 99999999998888752
Q ss_pred CCCCchHHHHHHHHh-cCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH-------Hhcccc-----CC
Q psy14428 359 DFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYS-----NP 425 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~-----~~ 425 (583)
+. .. ...+ +- ...|-.+.--+--||+.=--+||++- .+++ .+-.++.-. ...... +.
T Consensus 266 ~~-~~---~~~f-dFr~p~V~Sisa~~HKYGl~~~G~~~vl~--r~k~---~~~~q~~~~~~w~Gg~y~s~TlngSR~g~ 335 (491)
T KOG1383|consen 266 GY-LN---EEEF-DFRVPGVTSISADGHKYGLAPAGSSWVLY--RNKE---LLPHQLFFHTDWLGGIYASPTLNGSRPGS 335 (491)
T ss_pred cc-cC---cccc-ccCCCCceeEeeccceeeeeecCcEEEEE--cccc---cccceEEEeccccCccccCcccccCCccc
Confidence 10 00 0011 11 11222222222114443334588887 4432 222222211 111222 23
Q ss_pred ChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 426 PIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 426 s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
....|++..--+..+.|.+..+++.+....+++-++
T Consensus 336 ~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie 371 (491)
T KOG1383|consen 336 QVAAQWAALMSLGEEGYRENTQNIVETARKLREGIE 371 (491)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344566665566677777766666655555544443
No 379
>PTZ00376 aspartate aminotransferase; Provisional
Probab=96.58 E-value=0.0037 Score=66.85 Aligned_cols=71 Identities=54% Similarity=1.011 Sum_probs=60.2
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
++|.+|+||+.+...++..+.....+|.+++|+|.++..+++..|.++..|+.+++..-++|++.+.+.++
T Consensus 101 ~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~ 171 (404)
T PTZ00376 101 VQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLR 171 (404)
T ss_pred eeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHH
Confidence 48999999999998777655433378999999999999999999999999999877678999998877664
No 380
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=96.52 E-value=0.039 Score=57.38 Aligned_cols=141 Identities=11% Similarity=0.128 Sum_probs=101.0
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC-----CCCCEEEEcCCCChh
Q psy14428 199 DHEYAN---IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY-----PGVKTVYFPTPTWNG 270 (583)
Q Consensus 199 ~~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~ 270 (583)
.+-|.| .+|+.++...+.+|+.+--|. |.|.+=+.+|+++-.. ...+++... ...+.|+||+-....
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~a-Gll~Ir~YHe~rG~~~R~~~LIP~SAHGT 169 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYA-GLLAIRAYHESRGEGHRNICLIPDSAHGT 169 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhH-HHHHHHHHHHHcCCCcCcEEEeeccccCC
Confidence 344544 578889999999999875443 3444423556655433 222333321 124689999988888
Q ss_pred hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q psy14428 271 HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDM 350 (583)
Q Consensus 271 ~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De 350 (583)
-...+.+.|.+||.|+. ++ +..+|+++|++++ .+++.++.++||+ |-. +=.+.+++|+++..++|..+..|-
T Consensus 170 NPASAam~G~~VV~V~~-~~-~G~VDlddLk~k~---~~~~AalMiTnPs--T~G-vFE~~I~ei~~ivH~~Gg~vY~DG 241 (496)
T COG1003 170 NPASAAMAGFKVVVVKC-DE-NGNVDLDDLRAKA---EDNLAALMITNPS--TLG-VFEEDIREICEIVHEAGGQVYYDG 241 (496)
T ss_pred ChhhHhhcCceEEEEec-CC-CCCccHHHHHHHh---ccceeEEEeccCc--ccc-cchhhHHHHHHHHHHcCCEEEecC
Confidence 88889999999999999 54 4689999999988 4677788887775 323 346778899999999999998888
Q ss_pred cC
Q psy14428 351 AY 352 (583)
Q Consensus 351 ~Y 352 (583)
+-
T Consensus 242 AN 243 (496)
T COG1003 242 AN 243 (496)
T ss_pred cc
Confidence 74
No 381
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.39 E-value=0.036 Score=57.56 Aligned_cols=170 Identities=15% Similarity=0.084 Sum_probs=93.5
Q ss_pred CCeEEEecCCchhH-HHHHHHHHHHhCCCCCEEEEcCCC-ChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHc
Q psy14428 230 NRLAIVQGISGSGS-LRVGTAFLERFYPGVKTVYFPTPT-WNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKA 306 (583)
Q Consensus 230 ~~I~i~~t~G~~~a-l~l~~~~l~~~~~~gd~Vlv~~P~-y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~ 306 (583)
...++ ++.+++- +.+....++ -.+.++.|+.+.-. |..+ ..+..+|.+++.||.... +.-..|.+.+++.+++
T Consensus 75 ~~~~~--vP~atgm~l~l~l~~l~-~r~~a~~Viw~ridqkSc~-kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~ 150 (389)
T PF05889_consen 75 KSCFV--VPMATGMSLTLCLLALR-MRPKAKYVIWPRIDQKSCF-KAIERAGLEPVVVENVLEGDELITDLEAIEAKIEE 150 (389)
T ss_dssp CEEEE--ESS-HHHHHHHHHHHHH-HHCT--EEEEEEEETHHHH-HHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHH
T ss_pred cceEE--EecccccHHHHHHHHHh-cccCCceEEEeeccccchH-HHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHH
Confidence 34556 5556543 333212222 23558888887765 5444 456678999998885322 2223367778888876
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE-EEEecCcc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL-CLAQSFSK 385 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v-i~i~S~SK 385 (583)
..+...+.++++..-=.+. -.|+..+|+++|+++|++.|.-.+|+-=... -...+.... ..+++ +++.|.-|
T Consensus 151 ~G~~~iLcvltttscfapr--~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~----~~~~i~~a~-~~GRvda~vqS~dk 223 (389)
T PF05889_consen 151 LGADNILCVLTTTSCFAPR--LPDDIEEIAKICKEYDIPHLVNNAYGVQSSK----CMHLIQQAW-RVGRVDAFVQSTDK 223 (389)
T ss_dssp HCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH----HHHHHHHHH-HHSTCSEEEEEHHH
T ss_pred hCCCCeEEEEEecCccCCC--CCccHHHHHHHHHHcCCceEEccchhhhHHH----HHHHHHHHH-hcCCcceeeeecCC
Confidence 6556566666544332332 3457999999999999999999999542110 011122211 23444 78999999
Q ss_pred cccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 386 NMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
+| |-+.--+-+.+ ++ +..+..+.+.
T Consensus 224 NF-~VPvGgai~As--~~----~~~i~~vs~~ 248 (389)
T PF05889_consen 224 NF-MVPVGGAIMAS--FD----PSGILAVSKE 248 (389)
T ss_dssp HH-CEESSHEEEEE--SS----HHHHHHHHHT
T ss_pred CE-EecCCCcEEEe--cC----HHHHHHHHHH
Confidence 99 45544334444 54 5788887764
No 382
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=96.26 E-value=0.31 Score=51.04 Aligned_cols=208 Identities=12% Similarity=0.046 Sum_probs=107.3
Q ss_pred HHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEE--EcCCCChh-hHHHHhhcCCeEEEEeccc
Q psy14428 213 KLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVY--FPTPTWNG-HVRFCTDSRLNVGAYRYFD 289 (583)
Q Consensus 213 ~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vl--v~~P~y~~-~~~~~~~~G~~~~~v~~~d 289 (583)
+.+.+.+++-.+++ +..+|+++ +.|++++++.+ ...+..+||+++ +.+=.|.. +...++.+| ++..+....
T Consensus 52 ~~~~~~Lr~Ll~~P-~~y~Vlfl-~GggT~~~ea~---~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~ 125 (364)
T PRK12462 52 AQAEADLRDLLGIP-DEYGVVFL-QGGSSLQFSMI---PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGA 125 (364)
T ss_pred HHHHHHHHHHhCCC-CCCeEEEE-eccHHHHHHHH---HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcC
Confidence 33334444433332 12366662 45578888875 344555588654 44333543 344556666 444332100
Q ss_pred CCC--CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHH
Q psy14428 290 NKT--NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSL 367 (583)
Q Consensus 290 ~~~--~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~ 367 (583)
..+ ..++++.+ + ..+...++.++.-.-.||+.++ ++.+.++.++|+|-+=.-+... ..+
T Consensus 126 ~~~~~~~p~~~~~----~-~~~d~~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~~~s~p------id~ 186 (364)
T PRK12462 126 ASGYRTLPSLAEL----D-WDARAPFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMSSDFMSRP------FDV 186 (364)
T ss_pred CCCCCcCCCHHHh----c-cCCCCcEEEEccCCCCceEecC--------cccccCCCeEEEEcCchhhCCC------CCh
Confidence 111 12333333 1 1345666777776778898886 2223368999999985443321 112
Q ss_pred HHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH------------HhccccCCChHHHHHHHH
Q psy14428 368 RYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL------------IRGFYSNPPIHGARIVTE 435 (583)
Q Consensus 368 ~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~------------~~~~~~~~s~~~q~~~~~ 435 (583)
+.. -++..|.-|++|-||+ +.+++ . ++++++.... ...++..+|...-+++..
T Consensus 187 ----~~~--dvi~agsQKnlgP~Gl--tvviv--s-----~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~ 251 (364)
T PRK12462 187 ----EAY--GMVYAHAQKNLGPAGV--TVAII--R-----RALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMAL 251 (364)
T ss_pred ----HHc--cEEEeeccccCCCCce--EEEEE--C-----HHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHH
Confidence 222 3556677899998886 56666 4 3555544331 122344555555555544
Q ss_pred H---h-CC-hhhhhhhhhHHHHHHHHHHHH
Q psy14428 436 I---L-SD-PKLKAQCDETERIMSQLKILI 460 (583)
Q Consensus 436 ~---l-~~-~~~~~~~~~~~~~~~~l~~~~ 460 (583)
. + ++ +.++...++.++..+.+...+
T Consensus 252 ~l~~i~~e~GGl~~~~~r~~~ka~~ly~~i 281 (364)
T PRK12462 252 VLRWIRDEIGGVHAMRDINARKAAMLYATL 281 (364)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 4 2 34 356555555555444444444
No 383
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.07 E-value=0.045 Score=55.46 Aligned_cols=142 Identities=11% Similarity=0.051 Sum_probs=98.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh--CCCCCEEEEcCCC-ChhhHHHH
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF--YPGVKTVYFPTPT-WNGHVRFC 275 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~--~~~gd~Vlv~~P~-y~~~~~~~ 275 (583)
...|..+.++..|.+++.+.++- +.++. |.-|.+|-.+...++... ..||....+++-. |.......
T Consensus 72 DEAYagsrs~~~L~~avkdifGf--------q~~iP--thQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~ 141 (471)
T COG3033 72 DEAYAGSRSYYALADAVKDIFGF--------QYTIP--THQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHI 141 (471)
T ss_pred chhhcccccHHHHHHHHHHhcCc--------eeeee--ccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHH
Confidence 45699999999999999999863 23333 777777776643332211 1134333444333 55566677
Q ss_pred hhcCCeEEEEecccCC---------CCCCChhhHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCe
Q psy14428 276 TDSRLNVGAYRYFDNK---------TNGLDFAGMMEDIKAMPE--RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHL 344 (583)
Q Consensus 276 ~~~G~~~~~v~~~d~~---------~~g~d~~~l~~~l~~~~~--~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i 344 (583)
+..|..++.++. ++. ...+|++.+++.+++... .+.+++..+.|---|.-.|.+.++++.++|++|++
T Consensus 142 ~~ng~~~~n~~~-~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~i 220 (471)
T COG3033 142 QINGATPRNVYV-DEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDI 220 (471)
T ss_pred HhcCCccccccc-cccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCC
Confidence 888988887776 331 145889999998877532 23334444555566899999999999999999999
Q ss_pred EEEEecc
Q psy14428 345 YPFFDMA 351 (583)
Q Consensus 345 ~iI~De~ 351 (583)
.++.|.+
T Consensus 221 pvv~Da~ 227 (471)
T COG3033 221 PVVMDAA 227 (471)
T ss_pred cEEeehh
Confidence 9999987
No 384
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=95.92 E-value=0.016 Score=61.74 Aligned_cols=70 Identities=41% Similarity=0.818 Sum_probs=59.5
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+.|-++++||.++..++...-++ .+|.+++|+|.++..+++..|.++..|+..++..-++|++.+.+.++
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~~pG-d~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~ 167 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRAFPD-AKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLS 167 (396)
T ss_pred EecCCccHHHHHHHHHHHHhCCC-CeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHH
Confidence 67888999999999877654466 68999999999999999999999999998766567899998766554
No 385
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=95.52 E-value=0.15 Score=54.20 Aligned_cols=189 Identities=13% Similarity=0.165 Sum_probs=96.2
Q ss_pred ccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCC-----CCCCH----HHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 167 NLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYAN-----IGGDA----KFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 167 ~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~-----~~G~~----~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
-++.|.++. ..|+.+.+. +.+++ -...|+| ++|.. ++...|++.. |.++ -|.-+
T Consensus 69 fiG~G~y~~-----~~P~~i~~~---i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLT----Gmdv--aNaSl-- 132 (429)
T PF02347_consen 69 FIGAGSYTH-----YVPAVIDRN---ILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELT----GMDV--ANASL-- 132 (429)
T ss_dssp ---CTTT----------HHHHH----HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHH----TSSE--E-SEB--
T ss_pred cccccccCc-----eeChhhcCc---cccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhh----CCCc--cCCCC--
Confidence 345666642 244555542 23332 1345666 45654 4444455544 3432 23334
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSI 312 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~ 312 (583)
-.|++.+-+.+....+.-....++|+++.-.++.+..++ +..|++++.++. ++. ...| .+++.
T Consensus 133 yd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~-~~~-~~~d-----------~~~~a 199 (429)
T PF02347_consen 133 YDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL-DED-GTTD-----------DDDTA 199 (429)
T ss_dssp SSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B-BTT-CSB------------STTEE
T ss_pred CChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc-ccc-CCcc-----------ccCeE
Confidence 557776666553334443333469999999999888754 446899999998 442 2222 46778
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc--
Q psy14428 313 LFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY-- 390 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~-- 390 (583)
.+++.+||. .|.+-+ .++|.+++.+++.+++. .-..+.... +++ +.+.+--|++++ .|+||+|
T Consensus 200 ~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~--~ad~~aL~~-------l~~-Pge~GADI~vg~-~Q~fg~p~~ 264 (429)
T PF02347_consen 200 AVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV--GADPNALGG-------LKS-PGEYGADIVVGE-HQTFGIPMG 264 (429)
T ss_dssp EEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE--CGGCCGCCT-------C---GGGGT-SEEEEC-CTTTT---C
T ss_pred EEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE--ecCHHHHhC-------cCC-hhhcCccEEeeC-CCCCcccCC
Confidence 888888873 566554 88889999999988776 222232222 111 222333344776 7877654
Q ss_pred --CccceEEEE
Q psy14428 391 --GERVGTFSV 399 (583)
Q Consensus 391 --GlRiG~lv~ 399 (583)
|=-.|++.+
T Consensus 265 ~GGP~~G~~a~ 275 (429)
T PF02347_consen 265 FGGPGAGFFAV 275 (429)
T ss_dssp CC-S--EEEEE
T ss_pred CCCCCeeeEEE
Confidence 556788888
No 386
>KOG3843|consensus
Probab=95.02 E-value=0.25 Score=48.06 Aligned_cols=210 Identities=16% Similarity=0.138 Sum_probs=113.0
Q ss_pred CCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEE-ecccCCCCCCChhhHHH
Q psy14428 224 FPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAY-RYFDNKTNGLDFAGMME 302 (583)
Q Consensus 224 g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~d~~~~g~d~~~l~~ 302 (583)
|++.-.+.+++ +.+-| -++.+....++.-.|+..-|+-+.-.-......+-.+|.+++-+ ++.|.+.-.-|++..++
T Consensus 71 glhav~nc~vv-pl~tg-mslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~ 148 (432)
T KOG3843|consen 71 GLHAVANCFVV-PLATG-MSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEA 148 (432)
T ss_pred hhhhhhceeEE-ecccc-ccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHH
Confidence 44433444443 23222 24445433455555544555544333222333344578877665 33333333447888888
Q ss_pred HHHcCCCCcEEEEeCC--CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE-EE
Q psy14428 303 DIKAMPERSILFLQTS--SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL-CL 379 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~--p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v-i~ 379 (583)
.+++..+...+.+.++ +--| -+++.+++|..+|..|+++-|+..+|+--... -..-+.. ..+-+++ -+
T Consensus 149 ~iee~g~dcilci~sttscfap----r~pd~leaiaaica~~diphivnnayglqsee----~i~~iaa-~~~~grida~ 219 (432)
T KOG3843|consen 149 IIEELGEDCILCIHSTTSCFAP----RSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE----CIHKIAA-AAECGRIDAF 219 (432)
T ss_pred HHHHhCCceEEEEeecccccCC----CCCchHHHHHHHHHccCchhhhccccccchHH----HHHHHHH-HhhhccHHHH
Confidence 8877777666655432 2223 36789999999999999999999999643211 1111222 1222332 46
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHH
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETER 451 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~ 451 (583)
+.|+-|+|-+|= -|.+++.-. +.+|+.+.+.-....+.+|++--.+..-.+....+.+...+.+.
T Consensus 220 vqsldknf~vpv--ggaiia~fk-----~n~iq~iak~ypgrasa~ps~dllitll~~gqn~f~e~~~eqke 284 (432)
T KOG3843|consen 220 VQSLDKNFMVPV--GGAIIAAFK-----DNFIQEIAKMYPGRASASPSLDLLITLLSLGQNAFKELFGEQKE 284 (432)
T ss_pred HHHhhhcceeec--chhHhhHhH-----HHHHHHHHHhCCCccccCccHHHHHHHHHhchhHHHHHHHHHHH
Confidence 789999996542 144444111 35677766544333444555544444444555555555544443
No 387
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=94.81 E-value=1.2 Score=52.10 Aligned_cols=147 Identities=10% Similarity=0.080 Sum_probs=87.9
Q ss_pred cCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCC-----CCC----HHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 168 LGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANI-----GGD----AKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 168 l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~-----~G~----~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
++.|.++. ..|+.+.+.+.+ ++. ...|+|. ||. -++.+.+++..+ . +..|..+ .
T Consensus 69 ig~G~y~~-----~~p~~i~r~v~~---~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtG----m--~~aNaSl--~ 132 (939)
T TIGR00461 69 IGMGYYGT-----ILPPVIQRNLLE---NPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTG----L--PVANASL--L 132 (939)
T ss_pred CCCCcCCC-----cCChHHHHHHHh---CchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHC----C--Chhhhhc--c
Confidence 46666642 244566544332 321 3456654 454 345555555553 3 3445555 6
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh----hcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEE
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT----DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSIL 313 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~ 313 (583)
.+++.+.+.+....+.-..++++|+|++-.++.+..+++ ..|++++.+++ +.+++.+ .+..
T Consensus 133 d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~----------~~l~~~~-----~~~~ 197 (939)
T TIGR00461 133 DEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC----------SDIKKAV-----DVFG 197 (939)
T ss_pred chhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH----------HHHhhcC-----CEEE
Confidence 677777775422222212234899999999988876655 67888887754 2232222 3556
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe
Q psy14428 314 FLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFD 349 (583)
Q Consensus 314 i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~D 349 (583)
+++.+|+ =+|.+. ++++|++++.+++.+++.+
T Consensus 198 v~~q~Pn-~~G~ie---d~~~i~~~~h~~gal~~~~ 229 (939)
T TIGR00461 198 CLLQYPA-TDGSIL---DYKQLIDALHSHKSLVSVA 229 (939)
T ss_pred EEEECCC-CCeEEe---cHHHHHHHHHHcCCEEEEE
Confidence 6666765 468775 5888899999999988874
No 388
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=94.30 E-value=8.2 Score=40.62 Aligned_cols=192 Identities=16% Similarity=0.176 Sum_probs=109.4
Q ss_pred ccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCCC-----CCC----HHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 167 NLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANI-----GGD----AKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 167 ~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~-----~G~----~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
-++.|.++.- .|+.+.+. +++++ -...|+|. +|. -++..-++++. |.++.....
T Consensus 79 fiG~GyY~~~-----~P~vI~rn---ile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT----Gm~VANASm---- 142 (450)
T COG0403 79 FIGAGYYDTY-----TPPVILRN---ILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT----GLDVANASM---- 142 (450)
T ss_pred hccCcccCCc-----CcHHHHHH---hhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHh----CCCcccchh----
Confidence 3577877532 45555533 33342 23456664 343 23344444443 455444333
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc----CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS----RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSI 312 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~----G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~ 312 (583)
--|++.+-+.+....+.-..+.++++|+.-.++.+..+++.. |.+++.++. + |.+.+++. . ...+.
T Consensus 143 ~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~-~------d~~~l~~~-~--~~~~~ 212 (450)
T COG0403 143 LDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA-D------DLDDLESA-D--DGDVF 212 (450)
T ss_pred hhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc-c------hhhhhhhc-c--ccCeE
Confidence 345666655543233333333589999999999998887653 567776655 2 55555554 1 33556
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH--HHhcCcEEEEecCc---ccc
Q psy14428 313 LFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF--AKEVGQLCLAQSFS---KNM 387 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~--~~~~~~vi~i~S~S---K~~ 387 (583)
.+++-+|+ -.| ...+++++|.+.+++++.++++=- ++.++--+ +.+.+--|+++|-. =-+
T Consensus 213 gv~vQyP~-~~G--~~~~d~~~l~~~~h~~~al~~v~a------------DplaL~LL~pPGe~GADIvvG~~QrfGvPm 277 (450)
T COG0403 213 GVLVQYPN-TFG--IVEEDLRALIEAAHSAGALVIVAA------------DPLALGLLKPPGEFGADIVVGSAQRFGVPM 277 (450)
T ss_pred EEEEecCC-CCC--ccchhHHHHHHHHhhcCCEEEEEe------------chhHhhccCCccccCCceEEecCcccCCCc
Confidence 66665554 334 455679999999999987666411 12222111 23445667888743 334
Q ss_pred cccCccceEEEE
Q psy14428 388 GLYGERVGTFSV 399 (583)
Q Consensus 388 ~l~GlRiG~lv~ 399 (583)
|.-|=.+||..+
T Consensus 278 gfGGPhag~fA~ 289 (450)
T COG0403 278 GFGGPHAGYFAV 289 (450)
T ss_pred CCCCcceeeeeE
Confidence 445788899988
No 389
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=93.91 E-value=0.11 Score=54.50 Aligned_cols=78 Identities=18% Similarity=0.117 Sum_probs=63.9
Q ss_pred ceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHhhhhhcc
Q psy14428 3 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKLAIVQGI 81 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~a~~q~~ 81 (583)
.|.+-+|++++.....++.+.-++ .+|++++|+|.++..+++..|.++..|+........+|++.+.+.++..+.+.+
T Consensus 70 ~i~~~~G~~~~~~~~~~~~~~~~~-~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 147 (363)
T PF00155_consen 70 NILVTSGAQAALFLLLRLLKINPG-DTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGP 147 (363)
T ss_dssp GEEEESHHHHHHHHHHHHHHSSTT-SEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTE
T ss_pred EEEEecccccchhhhhhccccccc-ccceecCCccccccccccccCceeeecccccccccccccccccccccccccccc
Confidence 466678888777766666532244 689999999999999999999999999988778889999999999988765555
No 390
>KOG1403|consensus
Probab=93.64 E-value=1.3 Score=44.04 Aligned_cols=188 Identities=12% Similarity=0.040 Sum_probs=102.6
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-hh------cCC---e--EEEE-ecccC-------
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TD------SRL---N--VGAY-RYFDN------- 290 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~------~G~---~--~~~v-~~~d~------- 290 (583)
-.++ ++.|++|-+++.++.+.+..+.|.| +.+-.|....... +. .|. + .+.+ |..|-
T Consensus 104 vc~F--~NSGSEANDLALRLAR~ftkhqDvI-tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~ 180 (452)
T KOG1403|consen 104 VCFF--VNSGSEANDLALRLARNFTKHQDVI-TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD 180 (452)
T ss_pred EEEE--ecCCchhhHHHHHHHHhhcccCceE-EEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence 3455 8889999999888888888866654 4455555443221 10 011 1 1211 22110
Q ss_pred ---CCCC---CChhhHHHHHH---cCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 291 ---KTNG---LDFAGMMEDIK---AMPERSILFLQTSSHNPTGVDLSE-DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 291 ---~~~g---~d~~~l~~~l~---~~~~~~~~i~i~~p~NPTG~~~s~-~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
++-. .--+.+++.++ ....+..+++--+-+.=-|.++++ .-.+++++..+.++-+.|.||+--+|..-+
T Consensus 181 ~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG- 259 (452)
T KOG1403|consen 181 KMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG- 259 (452)
T ss_pred ccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc-
Confidence 0000 00122222222 122333333333333334555544 457889999999999999999988887655
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH--HhccccCCChHHHHHHHH
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL--IRGFYSNPPIHGARIVTE 435 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~--~~~~~~~~s~~~q~~~~~ 435 (583)
...+++..+ +-+=-|-++.|.+| .|.-++.++. . +++.+++... .-...++-++.+-.+...
T Consensus 260 -~hyWafq~y----~fiPDIVtmgKpmG-NGhPVa~Vat--t-----keIA~Af~atgv~YFNTyGGnPVsCAv~la 323 (452)
T KOG1403|consen 260 -SHYWAFQTY----NFIPDIVTMGKPMG-NGHPVAAVAT--T-----KEIAQAFHATGVEYFNTYGGNPVSCAVGLA 323 (452)
T ss_pred -hhhhhhhhh----ccccchheecccCC-CCCeeeEEec--c-----HHHHHHhccccceehhccCCCchhHHHHHH
Confidence 334444332 22223446789999 9999999988 4 4677777652 222234445544443333
No 391
>KOG1402|consensus
Probab=93.12 E-value=0.85 Score=46.05 Aligned_cols=127 Identities=13% Similarity=0.122 Sum_probs=81.5
Q ss_pred ChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhc
Q psy14428 296 DFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS-EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEV 374 (583)
Q Consensus 296 d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s-~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~ 374 (583)
|.++++..++. ++...+++---|--.|++.+ +.-+++..++|.+||+++|.||+-.++...+. ..... ...-.
T Consensus 195 d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk---~la~d-~env~ 268 (427)
T KOG1402|consen 195 DAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK---LLACD-YENVR 268 (427)
T ss_pred CHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc---EEEee-hhhcC
Confidence 67888888853 56666666555777786654 55789999999999999999999988876651 11111 11112
Q ss_pred CcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 375 GQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 375 ~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+.++. |.|.++--=+-+..+++ . ++++..++.-.-...++-++++-.++.+.++
T Consensus 269 PDivi---lgKalSGG~~Pvsavl~--~-----~~im~~~~pgeHgsTyggNpLg~~vaiAale 322 (427)
T KOG1402|consen 269 PDIVI---LGKALSGGVYPVSAVLA--D-----DDIMLNIKPGEHGSTYGGNPLGCAVAIAALE 322 (427)
T ss_pred CCeEE---EeccccCCeeeeEEEEe--c-----HHHHhccCCCccccccCCChHHHHHHHHHHH
Confidence 23443 35777622345666666 4 4677776655444556667777666555554
No 392
>KOG1358|consensus
Probab=92.63 E-value=0.98 Score=46.64 Aligned_cols=207 Identities=11% Similarity=0.026 Sum_probs=115.8
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhcc------CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK------NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~------~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
+.+.+||+..+...-.+ .+.+++.....++. +...-|+...-...|.+.||++++.. +.|+-
T Consensus 93 G~~~~N~aS~NfL~l~~----~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E-------~aivY- 160 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIE----NEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE-------DAIVY- 160 (467)
T ss_pred Cceeecccchhhhhhcc----cHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc-------ceeee-
Confidence 44667777766542211 24455554444433 11223666666678999999999753 55665
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC------CC
Q psy14428 236 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM------PE 309 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~------~~ 309 (583)
..|-+ ++.- .+..++..||.|.+.+-.-.....-++...-.++...- . |.+.++..+.+. .+
T Consensus 161 -s~gF~-ti~S---~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh---n----dm~~lerll~E~~~~~~K~~ 228 (467)
T KOG1358|consen 161 -SYGFS-TIES---AIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH---N----DMEDLERLLPEQEDEDQKNP 228 (467)
T ss_pred -ccccc-hhhh---cchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC---C----CHHHHHHhccCcchhhhhcc
Confidence 33332 2222 35667888999888776665566555555545554432 1 444454433221 11
Q ss_pred ---C-cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 310 ---R-SILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 310 ---~-~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
. .+++++-----+||...+ +.+|+++..|+..-||.||.|+-=..+...+....-.. .+..+--++++|++-
T Consensus 229 k~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~-v~~~~iDiv~~sm~~ 304 (467)
T KOG1358|consen 229 KKALTRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFG-VPITDIDIVTASMET 304 (467)
T ss_pred ccccceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCC-CCccceeeeeecccc
Confidence 1 233443333456887776 55668888899999999999864433321011000000 112334578888888
Q ss_pred cccccCccceEEEE
Q psy14428 386 NMGLYGERVGTFSV 399 (583)
Q Consensus 386 ~~~l~GlRiG~lv~ 399 (583)
.++-.| |+.++
T Consensus 305 alas~G---gFc~G 315 (467)
T KOG1358|consen 305 ALASGG---GFCAG 315 (467)
T ss_pred cccccC---ceeec
Confidence 876555 66666
No 393
>KOG0628|consensus
Probab=92.00 E-value=0.28 Score=51.48 Aligned_cols=94 Identities=17% Similarity=0.187 Sum_probs=68.8
Q ss_pred EEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 261 VYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE--RSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 261 Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~--~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
+...+-+-..........|+++..++. |+ +++++.+.|.+++++... -.-++++.|- =|-.+-+-+++.+|..+
T Consensus 185 ~Y~SDqahssveka~~i~~VklR~l~t-d~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~--GTT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 185 AYCSDQAHSSVEKACLIAGVKLRALPT-DE-NFGMRGDTLRKAIEEDIARGLIPFFVCATL--GTTSSCAFDELEELGPV 260 (511)
T ss_pred EEecCcccchHHHhHhhcceeEEEeec-cc-CcCCCHHHHHHHHHHHHhCCCccEEEEEee--cCccccccccHHHhcch
Confidence 345556666777777778899999998 65 799999999999976411 1122332222 24445567899999999
Q ss_pred HHhcCeEEEEeccCCCCCCC
Q psy14428 339 VKQRHLYPFFDMAYLGLTSG 358 (583)
Q Consensus 339 a~~~~i~iI~De~Y~~l~~~ 358 (583)
|+++++|+-+|.+|.+-.+-
T Consensus 261 c~~~glWLHVDAAYAGsa~i 280 (511)
T KOG0628|consen 261 CREEGLWLHVDAAYAGSAFI 280 (511)
T ss_pred hhhcCEEEEeehhhcccccc
Confidence 99999999999999976664
No 394
>KOG0629|consensus
Probab=91.88 E-value=1.3 Score=46.18 Aligned_cols=149 Identities=11% Similarity=-0.059 Sum_probs=88.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC----------CEEEEc-CCC
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV----------KTVYFP-TPT 267 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g----------d~Vlv~-~P~ 267 (583)
...|.-..+.--..+.+-..+.+-.|++...|.|. ++||+-+--.+..+.+.-.-|+ +-|+.. +-+
T Consensus 130 ~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf---~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSees 206 (510)
T KOG0629|consen 130 MFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIF---APGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEES 206 (510)
T ss_pred CceEEecceEEeehHHHHHHHHHHhCCCCCCCcee---cCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccc
Confidence 45566666655555555555555567766666776 5665444333222222111111 233333 333
Q ss_pred ChhhHHHHhhcC---CeEEEEecccCCCCCCChhhHHHHHHcCCCC--cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q psy14428 268 WNGHVRFCTDSR---LNVGAYRYFDNKTNGLDFAGMMEDIKAMPER--SILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR 342 (583)
Q Consensus 268 y~~~~~~~~~~G---~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~--~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~ 342 (583)
.-.....+..+| -.++.|+. |+ .+.+++++|++.|..+..+ .-+++.++ --|-+.-.-+.+..|+++|++|
T Consensus 207 HYSi~kaAa~lg~gtd~c~~v~t-~e-~Gkm~~~dLe~kile~k~kg~~Pf~vnaT--aGTTV~GAFDdL~~iadiC~k~ 282 (510)
T KOG0629|consen 207 HYSIKKAAAFLGLGTDHCIKVKT-DE-RGKMIPDDLEKKILEAKAKGGVPFFVNAT--AGTTVLGAFDDLNGIADICEKH 282 (510)
T ss_pred hhhHHHHHHHhccCCceeEEecc-cc-cCccchHHHHHHHHHHHhcCCCCeEEEec--CCceeeeccCcHHHHHHHHHhc
Confidence 333555666677 57888888 54 4689999999988655322 22444333 2233334556788999999999
Q ss_pred CeEEEEeccCCC
Q psy14428 343 HLYPFFDMAYLG 354 (583)
Q Consensus 343 ~i~iI~De~Y~~ 354 (583)
++|+-+|.+|++
T Consensus 283 ~lWmHvDAAwGG 294 (510)
T KOG0629|consen 283 KLWMHVDAAWGG 294 (510)
T ss_pred CEEEEeeccccc
Confidence 999999999987
No 395
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=90.90 E-value=2.1 Score=43.29 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=89.1
Q ss_pred CCCCCeEEEecCCchhHHHHHHHHHHHhCC-CCCEEEEcCCC-Chh----hHHHHhhcCCeEEEEecccCCCCCCChhhH
Q psy14428 227 FKDNRLAIVQGISGSGSLRVGTAFLERFYP-GVKTVYFPTPT-WNG----HVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 227 ~~~~~I~i~~t~G~~~al~l~~~~l~~~~~-~gd~Vlv~~P~-y~~----~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l 300 (583)
..++++++ +.+.+--+... +...+.. +|++|++++-. |+. ....++..|.. +.+ + ..+.+..+
T Consensus 91 A~~~Evvv--~dtts~nl~k~--L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~---~-~~~~P~~~ 159 (407)
T COG3844 91 ARAGEVVV--TDTTSINLFKV--LAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL---E-GVIAPRAL 159 (407)
T ss_pred CCCCceEE--eCCcchHHHHH--HHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc---e-eeeChHHH
Confidence 45688888 77776666653 3344443 38999888744 322 23333444332 111 1 22356677
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
++.+ +..+.+++++.-|--||..+.. .+|-.++.+++++++-|-+++-=...- .+ ...+--+-|
T Consensus 160 ~~~~---~dd~AvV~L~~V~y~TGql~dm---~aiT~~AH~~galv~wDLAHsaGavp~------~L----h~~gaDfai 223 (407)
T COG3844 160 EEAI---TDDVAVVLLSHVNYKTGQLLDM---RAITALAHQHGALVGWDLAHSAGAVPV------DL----HAAGADFAI 223 (407)
T ss_pred HHhh---ccceEEEEeccccccccceeeH---HHHHHHHHhcCceEEeehhcccCCcce------ee----cccCCCeee
Confidence 7777 7888899999999999999874 555777889999999999875433210 11 222344667
Q ss_pred ecCccccc-ccCccceEEE
Q psy14428 381 QSFSKNMG-LYGERVGTFS 398 (583)
Q Consensus 381 ~S~SK~~~-l~GlRiG~lv 398 (583)
++--|.++ -||--.|.-+
T Consensus 224 gcsyKYLNgGPGapa~l~v 242 (407)
T COG3844 224 GCSYKYLNGGPGAPAGLFV 242 (407)
T ss_pred eeeceeccCCCCCceeEEe
Confidence 77777762 2665444333
No 396
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=90.69 E-value=0.38 Score=51.27 Aligned_cols=64 Identities=16% Similarity=0.251 Sum_probs=51.9
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
-|-+||.||.++..++.+ ++ .+|.+++|+|.++..+++..|.++..++.....+.++|++.+.+
T Consensus 100 ~t~G~~~al~~~~~~l~~--~g-d~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~ 163 (401)
T TIGR01264 100 LCSGCSHAIEMCIAALAN--AG-QNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLES 163 (401)
T ss_pred ECcChHHHHHHHHHHhCC--CC-CEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHH
Confidence 366788999998887754 55 67999999999999999999999988887555566788877654
No 397
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=90.03 E-value=0.52 Score=50.79 Aligned_cols=63 Identities=16% Similarity=0.275 Sum_probs=51.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
+-|-++|.||.++...|.+ ++ .+|.+++|+|.+|.......|.++..|+.....+-.+|++.+
T Consensus 121 ~it~G~~~al~l~~~~l~~--~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 183 (430)
T PLN00145 121 YLTAGCAQAIEIIMSVLAQ--PG-ANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGV 183 (430)
T ss_pred EEeCCHHHHHHHHHHHhcC--CC-CEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHH
Confidence 4577889999999998865 66 579999999999999999999999988865444456777665
No 398
>PRK08637 hypothetical protein; Provisional
Probab=89.92 E-value=0.6 Score=49.53 Aligned_cols=67 Identities=18% Similarity=0.328 Sum_probs=51.9
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhh-cCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~-~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+.|-+++.||++.+..|.+ ++ .+|.+++|+|+++..++. ..|.++..|+..+. ..++|++.+.+.++
T Consensus 73 ~it~G~~~al~~~~~~l~~--~g-d~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~ 140 (388)
T PRK08637 73 IVTNALTHGLSLVADLFVD--QG-DTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQ 140 (388)
T ss_pred eEccchHHHHHHHHHHhcC--CC-CEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHH
Confidence 5677778888888887765 55 579999999999999875 67999999998532 24788887765554
No 399
>PRK07550 hypothetical protein; Provisional
Probab=88.53 E-value=0.86 Score=48.23 Aligned_cols=63 Identities=13% Similarity=0.018 Sum_probs=48.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
|-++|.||.+.+..+.+ ++ .+|.+++|+|.++..+++..|.++..|+..+..+..+|.+.+.+
T Consensus 96 t~G~~~al~~~~~~l~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~ 158 (386)
T PRK07550 96 TSGCNQAFWAAMVTLAG--AG-DEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEA 158 (386)
T ss_pred ecCcHHHHHHHHHHhcC--CC-CEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHH
Confidence 44567899888887754 56 57999999999999999999999999987543344456655543
No 400
>KOG0634|consensus
Probab=88.45 E-value=2.7 Score=44.06 Aligned_cols=150 Identities=11% Similarity=0.011 Sum_probs=84.9
Q ss_pred hcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHH
Q psy14428 373 EVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERI 452 (583)
Q Consensus 373 ~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 452 (583)
.+-|+=++-+-++.+- +.+|.+=+...+| ++.+...-.++......+.+.+++.+++..
T Consensus 299 PGlRlG~it~~~~~l~-ril~~ae~~t~~p--------------------Sg~sq~iv~a~l~~wgqeG~~~wi~~l~~~ 357 (472)
T KOG0634|consen 299 PGLRLGWITGNSLFLK-RILDLAEVATSGP--------------------SGFSQGIVYAMLKRWGQEGFLRWIQHLRSS 357 (472)
T ss_pred CcceeEEeecCHHHHH-HHhhhcceeecCc--------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666665 7777776665223 233333333333333445556666667766
Q ss_pred HHHHHHHH----hhcc------CCCccchhhHHHHhc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCC
Q psy14428 453 MSQLKILI----RGFY------SNPPIHGARIVTEIL-SDPKLKAQWFEECKGMSNRISSIREELKSKILDK---GSKKN 518 (583)
Q Consensus 453 ~~~l~~~~----r~~~------~~~p~~g~~i~~~~l-~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~---~~pg~ 518 (583)
++.|+..+ +..+ -++|.+|.|+|+++. .+ -.+.+.+-+.++.+...+.+. .++|.
T Consensus 358 Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~-----------~~~~~~i~q~~e~i~~~~vk~gV~~v~G~ 426 (472)
T KOG0634|consen 358 YTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYIN-----------FDTKKSINQIEEIIFIKAVKNGVKLVCGS 426 (472)
T ss_pred HHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccc-----------cccccchHHHHHHHHHHHHHCCeEEecCc
Confidence 66665442 2111 278999999999985 00 001122334555555555553 36787
Q ss_pred cccccccc------cceeecCCChhhhhhhhhhhhHHHHHHHH
Q psy14428 519 WDHITNQK------GMFCYTGLSASQGMSNRISSIREELKSKI 555 (583)
Q Consensus 519 ~~~~~~~~------g~f~~~~l~~~~~~~~~~~~~~~~~~~~~ 555 (583)
|-...|+. -+++|+..+.+++++ ++.++...+++..
T Consensus 427 ~F~v~p~~s~~kiffRls~a~a~~e~l~~-g~~rf~~~ike~f 468 (472)
T KOG0634|consen 427 WFMVDPESSWSKIFFRLSIAFAEPEKLDE-GIERFGSVIKEHF 468 (472)
T ss_pred eeEEcCccCCCcceEEEEeecCCHHHHHH-HHHHHHHHHHHHh
Confidence 54333222 245667788888876 7777777776554
No 401
>PRK08912 hypothetical protein; Provisional
Probab=88.42 E-value=0.79 Score=48.54 Aligned_cols=64 Identities=14% Similarity=0.124 Sum_probs=49.1
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
+-|-|||+||.+....+.+ ++ .+|.+++|+|+++..+++..|.++..++. ++.+.++|.+.+.+
T Consensus 91 ~~t~G~~~al~~~~~~~~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~ 154 (387)
T PRK08912 91 MVTSGATEALAAALLALVE--PG-DEVVLFQPLYDAYLPLIRRAGGVPRLVRL-EPPHWRLPRAALAA 154 (387)
T ss_pred EEeCCcHHHHHHHHHHhcC--CC-CEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccCcCCHHHHHH
Confidence 4566889998777665533 55 68999999999999999999999988885 34445677776544
No 402
>KOG1405|consensus
Probab=86.87 E-value=18 Score=37.23 Aligned_cols=180 Identities=18% Similarity=0.172 Sum_probs=91.5
Q ss_pred ChhhHHHHHHcCC--CCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH-
Q psy14428 296 DFAGMMEDIKAMP--ERSILFLQTSSHNPTG--VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF- 370 (583)
Q Consensus 296 d~~~l~~~l~~~~--~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~- 370 (583)
.++.+++.|.+.. ..+.+-+|.-|----| .--|++-.+.|.+++++|++..|+||+--+-.-.+ ..+.-..+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG---k~WaHehw~ 330 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG---KFWAHEHWN 330 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC---ceeeehhcC
Confidence 3566666665543 2233433444433333 45689999999999999999999999964433222 11110000
Q ss_pred HHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHH--HHHHHHhccccCCCh--HHHHHHHHHhCChhhhhhh
Q psy14428 371 AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMS--QLKILIRGFYSNPPI--HGARIVTEILSDPKLKAQC 446 (583)
Q Consensus 371 ~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~--~l~~~~~~~~~~~s~--~~q~~~~~~l~~~~~~~~~ 446 (583)
.+.... +-+|||-|- .| ||..- + +++- ..+.. ++|.+-|. +....+.+.+.++.+....
T Consensus 331 l~~PpD---~vTFSKK~q-~g---Gffh~--~------~frpn~pYrif--NTWmGdP~k~lll~~vv~~I~~~~Ll~n~ 393 (484)
T KOG1405|consen 331 LDSPPD---VVTFSKKFQ-TG---GFFHD--E------EFRPNEPYRIF--NTWMGDPSKNLLLEEVVQEIKREDLLNNV 393 (484)
T ss_pred CCCCcc---ceehhhhhh-cC---ccccC--c------ccCCCchHHHh--hhhcCChHHHHHHHHHHHHHhHHHHHHHH
Confidence 011112 347899885 33 44433 1 2221 22222 23333322 2222334444454444433
Q ss_pred hhHHH-HHHHHHHHHh---hccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy14428 447 DETER-IMSQLKILIR---GFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKG 514 (583)
Q Consensus 447 ~~~~~-~~~~l~~~~r---~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~ 514 (583)
+.+-. +++.+..+-+ ..+...-..|.|+.+.+.+. +.|+.|...++-.|
T Consensus 394 ~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~-------------------~~Rdk~i~~~~~nG 446 (484)
T KOG1405|consen 394 AHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSG-------------------SIRDKLILIARLNG 446 (484)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCCh-------------------HHHHHHHHHHHHcC
Confidence 33322 2233333222 12334444688888877774 67778777776644
No 403
>PRK09082 methionine aminotransferase; Validated
Probab=86.78 E-value=0.9 Score=48.13 Aligned_cols=63 Identities=13% Similarity=0.103 Sum_probs=49.5
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
|-|||+||.+....+.+ ++ .+|.+++|+|.++...++..|.++..++. +..+..+|++.+.+.
T Consensus 97 t~G~~~al~~~~~~~~~--~g-d~Vli~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~ 159 (386)
T PRK09082 97 TAGATEALFAAILALVR--PG-DEVIVFDPSYDSYAPAIELAGGRAVRVAL-QPPDFRVDWQRFAAA 159 (386)
T ss_pred eCCHHHHHHHHHHHHcC--CC-CEEEEeCCCchhhHHHHHHcCCEEEEEec-CcccccCCHHHHHHh
Confidence 45679999988876643 55 67999999999999999999999988887 334567787765544
No 404
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=85.63 E-value=1.5 Score=46.48 Aligned_cols=67 Identities=15% Similarity=0.185 Sum_probs=50.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+.|-+||+|+.+....+.. ++ .+|.+++|+|.++..+++..|.++..++- +..+-.+|.+.+.+.++
T Consensus 95 ~it~G~~~al~~~~~~~~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~ 161 (391)
T PRK07309 95 LVTIGATEALSASLTAILE--PG-DKVLLPAPAYPGYEPIVNLVGAEIVEIDT-TENDFVLTPEMLEKAIL 161 (391)
T ss_pred EEeCChHHHHHHHHHHhcC--CC-CEEEEeCCCCcchHHHHHHcCCEEEEEec-CCcCCcCCHHHHHHHhh
Confidence 3467889999998887643 55 67999999999999999999999877763 33334577766654443
No 405
>PRK08361 aspartate aminotransferase; Provisional
Probab=85.12 E-value=1.6 Score=46.33 Aligned_cols=66 Identities=14% Similarity=0.039 Sum_probs=51.3
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
-|-|||.|+.+....+.+ ++ .+|.+++|+|..+...++..|.++..++.-+..+.++|.+.+.+.+
T Consensus 98 ~t~G~~~al~~~~~~l~~--~g-~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 163 (391)
T PRK08361 98 VTAGAYEATYLAFESLLE--EG-DEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELI 163 (391)
T ss_pred EeCChHHHHHHHHHHhcC--CC-CEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhc
Confidence 355788899988876644 55 6899999999999999999999998888744435568887776544
No 406
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=84.84 E-value=1.4 Score=39.83 Aligned_cols=59 Identities=19% Similarity=0.083 Sum_probs=45.9
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchh-hhhhcCCCceeeeeccCCCCcccch
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV-RFCTDSRLNVGAYRYFDNKTNGLDF 66 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~-~~~~~~~~~~~~y~~~~~~~~~~d~ 66 (583)
-+-|||.|+.+++..+.+ ++ ++|++++|+|..+. .+.+..|.++..++..+......|+
T Consensus 22 ~~~~~t~a~~~~~~~~~~--~~-~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 22 FVPSGTGANEAALLALLG--PG-DEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred EeCCcHHHHHHHHHHhCC--CC-CEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 345999999999998854 34 68999999999998 8888889999988876554333443
No 407
>PRK08636 aspartate aminotransferase; Provisional
Probab=84.78 E-value=1.8 Score=46.20 Aligned_cols=66 Identities=17% Similarity=0.224 Sum_probs=49.9
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec-cCCCCcccchhhhHHHHHhhh
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY-FDNKTNGLDFAGMMEDIKLAI 77 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~-~~~~~~~~d~~~~~~~~~~a~ 77 (583)
+++.||.+....|.+ ++ .+|.+++|+|.++..+++..|.++..++- ++. .-++|++.++..++.+-
T Consensus 103 G~~~al~~~~~~l~~--~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~ 169 (403)
T PRK08636 103 GSKEGYVHLVQAITN--PG-DVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNE-DFELDEDQFFENLEKAL 169 (403)
T ss_pred ChHHHHHHHHHHhCC--CC-CEEEEcCCCCcchHHHHHhcCCEEEEEeccccc-cCccChhhhhhHHHHHH
Confidence 345666666665544 55 68999999999999999999999988875 222 35899999887776654
No 408
>PLN02656 tyrosine transaminase
Probab=84.62 E-value=2 Score=45.97 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=48.8
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 70 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~ 70 (583)
-|-++|.||++....+.+ ++ .+|.+++|+|+++....+..|.++..++..+...-.+|++.+.
T Consensus 101 ~t~G~~~al~~~~~~l~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~ 163 (409)
T PLN02656 101 ITSGCTQAIDVALSMLAR--PG-ANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVE 163 (409)
T ss_pred EeCChHHHHHHHHHHHhC--CC-CeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHH
Confidence 355778999988887754 55 6799999999999999999999999888643333457776654
No 409
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=84.49 E-value=1.5 Score=46.42 Aligned_cols=62 Identities=16% Similarity=0.059 Sum_probs=44.9
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
++.+|.+....+.+ ++ .+|.+++|+|.++..+++..|.++..|+..+...-.+|++.+.+.+
T Consensus 100 ~~~~l~~~~~~~~~--~g-d~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~ 161 (383)
T TIGR03540 100 SKEGIAHIPLAFVN--PG-DIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDI 161 (383)
T ss_pred cHHHHHHHHHHhCC--CC-CEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhc
Confidence 35666666555433 45 6899999999999999999999999998743322345777765544
No 410
>PRK07337 aminotransferase; Validated
Probab=84.08 E-value=1.7 Score=46.01 Aligned_cols=64 Identities=16% Similarity=0.115 Sum_probs=48.9
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
-|-++|.||++.+..+.+ ++ .+|.+++|+|.++..+++..|.++..++.-...+-++|++.+.+
T Consensus 95 ~t~G~~~al~~~~~~l~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 158 (388)
T PRK07337 95 VTAGASAALLLACLALVE--RG-DEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEA 158 (388)
T ss_pred EecCcHHHHHHHHHHhcC--CC-CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHh
Confidence 455788999988887643 55 68999999999999999999998888876333345677766543
No 411
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=83.83 E-value=42 Score=32.34 Aligned_cols=121 Identities=15% Similarity=0.108 Sum_probs=75.3
Q ss_pred HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecc
Q psy14428 272 VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMA 351 (583)
Q Consensus 272 ~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~ 351 (583)
...++.+|..++.... +.. ..-..+++.+.+.... ...++ +|.+.|..++..+-.+|++.++-+
T Consensus 52 ~~~Ae~~gi~l~~~~~-~g~-~e~eve~L~~~l~~l~--~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~----- 115 (223)
T COG2102 52 ELQAEAMGIPLVTFDT-SGE-EEREVEELKEALRRLK--VDGIV-------AGAIASEYQKERVERLCEELGLKV----- 115 (223)
T ss_pred HHHHHhcCCceEEEec-Ccc-chhhHHHHHHHHHhCc--ccEEE-------EchhhhHHHHHHHHHHHHHhCCEE-----
Confidence 3456778888888776 221 2235677777775443 45666 899999999999999999999854
Q ss_pred CCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhcc
Q psy14428 352 YLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGF 421 (583)
Q Consensus 352 Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~ 421 (583)
|.+++-.+ +..-+..+...+-+++++. .|| .|++..=+|.-+- .+.++.+....+..
T Consensus 116 ~~PLWg~d---~~ell~e~~~~Gf~~~Iv~-Vsa-~gL~~~~lGr~i~--------~~~~e~l~~l~~~y 172 (223)
T COG2102 116 YAPLWGRD---PEELLEEMVEAGFEAIIVA-VSA-EGLDESWLGRRID--------REFLEELKSLNRRY 172 (223)
T ss_pred eecccCCC---HHHHHHHHHHcCCeEEEEE-Eec-cCCChHHhCCccC--------HHHHHHHHHHHHhc
Confidence 56777554 2234445555544555554 333 3344333444332 46777777664433
No 412
>KOG2040|consensus
Probab=83.48 E-value=12 Score=41.40 Aligned_cols=139 Identities=9% Similarity=0.095 Sum_probs=89.6
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC-CCC----CEEEEcCCCChhhHHHHhhcC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY-PGV----KTVYFPTPTWNGHVRFCTDSR 279 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~-~~g----d~Vlv~~P~y~~~~~~~~~~G 279 (583)
.+|+.++-+.+-+++-.--| -|++.+-+.+|+++- +.....++... ..| ...++|.-....-...++++|
T Consensus 577 aqGY~~lf~~Le~~Lc~iTG----~D~~s~QPNsGA~GE-YaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Mag 651 (1001)
T KOG2040|consen 577 AQGYQQLFTELEKDLCEITG----FDSFSLQPNSGAQGE-YAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAG 651 (1001)
T ss_pred HhhHHHHHHHHHHHhheeec----ccceeecCCCCcccc-hhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcC
Confidence 46777777777776644322 245555335555543 22222233322 112 234566656666677889999
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYL 353 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~ 353 (583)
.++++|.+ |. +..+|..+|.+..++....-.++.+..|. |-.++ .+.+++++++..+||--|..|-+-.
T Consensus 652 mkvvpV~~-~~-~G~id~~dLk~kaekh~~~Laa~MvTYPS--T~Gvf-E~~i~d~cd~iHehGGQVYlDGANM 720 (1001)
T KOG2040|consen 652 MKVVPVGC-DA-NGNIDMVDLKAKAEKHKDNLAALMVTYPS--THGVF-EEGIDDICDIIHEHGGQVYLDGANM 720 (1001)
T ss_pred CEEEEeec-cC-CCCccHHHHHHHHHHhhhhhheeEEeccc--ccccc-cccHHHHHHHHHhcCCEEEecCCCc
Confidence 99999998 54 46899999998887765555556665553 32333 4567899999999999999998753
No 413
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=82.87 E-value=1.9 Score=45.91 Aligned_cols=64 Identities=20% Similarity=0.273 Sum_probs=51.0
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
-|-|||.|+.++...+.. ++ .+|-+++|+|..+..+++..|+++..++.-...+.++|++.+.+
T Consensus 101 ~t~G~t~al~~~~~~l~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 164 (403)
T TIGR01265 101 LTSGCSQAIEICIEALAN--PG-ANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEA 164 (403)
T ss_pred EecChHHHHHHHHHHhCC--CC-CEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHH
Confidence 456789999999887753 55 67999999999999999999999988876434456788877754
No 414
>PRK07777 aminotransferase; Validated
Probab=82.68 E-value=2.1 Score=45.30 Aligned_cols=67 Identities=10% Similarity=0.181 Sum_probs=50.4
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCC-CCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~-~~~~~d~~~~~~~~ 73 (583)
+-|-|||+||.++..-+.+ ++ .+|.+++|+|..+..+++..|.++..+++.+. .+-.+|++.+.+.+
T Consensus 89 ~~t~G~~~al~~~~~~~~~--~g-d~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~ 156 (387)
T PRK07777 89 LVTVGATEAIAAAVLGLVE--PG-DEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAV 156 (387)
T ss_pred EEeCCcHHHHHHHHHHhcC--CC-CEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhc
Confidence 4467889999876654432 44 57999999999999999999999888887654 24457877765533
No 415
>PRK05957 aspartate aminotransferase; Provisional
Probab=82.49 E-value=2.1 Score=45.33 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=48.9
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
-|-+++.+|.+....+.. ++ .+|.+++|+|.+|...++..|.++..++. + ...++|++.+.+.++
T Consensus 94 ~t~G~~~~l~~~~~~~~~--~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~ 158 (389)
T PRK05957 94 VTAGSNMAFMNAILAITD--PG-DEIILNTPYYFNHEMAITMAGCQPILVPT-D-DNYQLQPEAIEQAIT 158 (389)
T ss_pred EeCChHHHHHHHHHHhcC--CC-CEEEEeCCCCcCHHHHHHhcCCEEEEeec-C-CCCCcCHHHHHHhcC
Confidence 355666788766655532 55 67999999999999999999999888764 3 345789998887654
No 416
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=82.48 E-value=2.3 Score=45.51 Aligned_cols=64 Identities=14% Similarity=0.187 Sum_probs=49.7
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
-|-++|.||.+....+.. ++ .+|.+++|+|.++..+++..|.++..++.-.....++|++.+.+
T Consensus 109 it~G~~~al~~~~~~~~~--~g-d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~ 172 (412)
T PTZ00433 109 LCSGVSHAILMALTALCD--EG-DNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRR 172 (412)
T ss_pred EeCChHHHHHHHHHHhcC--CC-CEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHH
Confidence 355678899988887744 55 68999999999999999999999988876433345778776643
No 417
>PTZ00377 alanine aminotransferase; Provisional
Probab=82.26 E-value=2.6 Score=46.10 Aligned_cols=70 Identities=17% Similarity=0.078 Sum_probs=51.6
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
+-|-+++.||.+.+..|.. -++ ..|.+++|+|.++..+++..|..+..++.-....-++|++.+-+.++.
T Consensus 142 ~it~Ga~~al~~~~~~l~~-~~g-D~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~ 211 (481)
T PTZ00377 142 FLTDGASSGIKLLLQLLIG-DPS-DGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQ 211 (481)
T ss_pred EEcCCHHHHHHHHHHHhcc-CCC-CEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHH
Confidence 3466788899998887741 145 679999999999999999999998877653222236788777665543
No 418
>PLN02187 rooty/superroot1
Probab=81.06 E-value=2.6 Score=45.96 Aligned_cols=63 Identities=17% Similarity=0.267 Sum_probs=49.6
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 70 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~ 70 (583)
-|-+++.||.+....|.+ |+ .+|.+++|+|..+....+..|.++..++......-++|++.+.
T Consensus 136 it~G~~~al~~~~~~l~~--pG-d~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~ 198 (462)
T PLN02187 136 LTAGCNQGIEIVFESLAR--PN-ANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIE 198 (462)
T ss_pred EeCCHHHHHHHHHHHhcC--CC-CEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHH
Confidence 355678889888887754 66 6799999999999999999999999888754444567776654
No 419
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=81.05 E-value=2.6 Score=44.54 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=42.3
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhh
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
++|.+|.+....+.+ ++ .+|.+++|+|.++..+++..|.++..++..+...-.+|++.+
T Consensus 101 G~~~~i~~~~~~~~~--~g-d~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l 159 (385)
T PRK09276 101 GSKEGIAHIPLAFVN--PG-DVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAI 159 (385)
T ss_pred CcHHHHHHHHHHhCC--CC-CEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHH
Confidence 345777766665533 45 689999999999999999999999988874432222555554
No 420
>PRK06108 aspartate aminotransferase; Provisional
Probab=81.02 E-value=2.7 Score=44.18 Aligned_cols=65 Identities=22% Similarity=0.147 Sum_probs=49.7
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCC-CCcccchhhhHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMED 72 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~-~~~~~d~~~~~~~ 72 (583)
-|-||+.|+.+....+.+ ++ .+|.+++|+|.++..+++..|.++..++..+. ....+|++.+.+.
T Consensus 89 ~t~g~~~al~~~~~~l~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 154 (382)
T PRK06108 89 VTSSGVQALMLAAQALVG--PG-DEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAA 154 (382)
T ss_pred EeCChHHHHHHHHHHhcC--CC-CEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHh
Confidence 356788898888776644 55 57999999999999999999999998887542 2344777766543
No 421
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=79.69 E-value=3.2 Score=43.93 Aligned_cols=62 Identities=10% Similarity=-0.014 Sum_probs=44.4
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
+++.||.+.+..|.+ ++ .+|.+++|+|.++..+++..|.++..++.-+...-.+|++.+.+.
T Consensus 100 Gs~~al~~~~~~l~~--~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 161 (388)
T PRK07366 100 GSQEGTAHLPLAVLN--PG-DFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTE 161 (388)
T ss_pred CcHHHHHHHHHHhCC--CC-CEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHh
Confidence 345566666665543 55 689999999999999999999999998873222234666665544
No 422
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=79.67 E-value=7.6 Score=42.71 Aligned_cols=69 Identities=14% Similarity=0.112 Sum_probs=50.6
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhh-cCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~-~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
+-|-++|+||.+.+..|.. |+ ..|.+++|+|+.+...++ ..|.++..++.-....-++|.+.+-+.++.
T Consensus 123 vit~Ga~~al~~l~~~l~~--pG-D~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~ 192 (496)
T PLN02376 123 VMSGGATGANETIMFCLAD--PG-DVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKK 192 (496)
T ss_pred EEccchHHHHHHHHHHhCC--CC-CEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHH
Confidence 3456778888888877755 66 679999999999999887 579998888764333346777766555443
No 423
>PRK06836 aspartate aminotransferase; Provisional
Probab=79.64 E-value=3.1 Score=44.15 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=49.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
|-++|.+|.+....+.+ ++ ..|.+++|+|..+..+++..|.++..++- |+.+.++|++.+.+.+
T Consensus 102 t~G~~~al~~~~~~l~~--~g-d~Vli~~p~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~~ 165 (394)
T PRK06836 102 TCGAAGALNVALKAILN--PG-DEVIVFAPYFVEYRFYVDNHGGKLVVVPT-DTDTFQPDLDALEAAI 165 (394)
T ss_pred eCChHHHHHHHHHHhcC--CC-CEEEEcCCCCccHHHHHHHcCCEEEEEec-CCccCcCCHHHHHhhc
Confidence 34667888877766643 55 67999999999999999999999998875 5556788887765544
No 424
>PRK07683 aminotransferase A; Validated
Probab=79.59 E-value=3.1 Score=44.08 Aligned_cols=49 Identities=16% Similarity=0.235 Sum_probs=39.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeee
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 55 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~ 55 (583)
+-|-|+|.||.+....+.+ ++ .+|.+++|+|.++..+++..|.++..++
T Consensus 93 ~~t~G~~~al~~~~~~l~~--~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~ 141 (387)
T PRK07683 93 IVTIGASEAIDIAFRTILE--PG-TEVILPAPIYPGYEPIIRLCGAKPVFID 141 (387)
T ss_pred EEeCChHHHHHHHHHHhCC--CC-CEEEEcCCCccchHHHHHHcCCEEEEee
Confidence 4456779999988877643 55 6899999999999999999999887554
No 425
>PRK07681 aspartate aminotransferase; Provisional
Probab=79.56 E-value=3.3 Score=44.04 Aligned_cols=63 Identities=13% Similarity=0.069 Sum_probs=44.9
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+++.||.+....+.+ ++ .+|.+++|+|.++..+++..|.++..|+.-+...-.+|++.+.+.+
T Consensus 101 G~~~al~~~~~~~~~--~G-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~ 163 (399)
T PRK07681 101 GSQDGLVHLPMVYAN--PG-DIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEI 163 (399)
T ss_pred CcHHHHHHHHHHhCC--CC-CEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhc
Confidence 455666666655533 55 6799999999999999999999999988632222246777765543
No 426
>PRK12414 putative aminotransferase; Provisional
Probab=79.01 E-value=2.8 Score=44.37 Aligned_cols=61 Identities=15% Similarity=0.191 Sum_probs=44.9
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
+|+.||.+...-+. -++ .+|.+++|+|.++..+++..|.++..++- ++.+..+|++.+.+.
T Consensus 98 g~~~al~~~~~~l~--~~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~ 158 (384)
T PRK12414 98 SASEGLYAAISALV--HPG-DEVIYFEPSFDSYAPIVRLQGATPVAIKL-SPEDFRVNWDEVAAA 158 (384)
T ss_pred ChHHHHHHHHHHhc--CCC-CEEEEeCCCccchHHHHHHcCCEEEEEec-CccccccCHHHHHhh
Confidence 45677766655442 255 67999999999999999999999988874 444456787766543
No 427
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=78.17 E-value=3.2 Score=44.67 Aligned_cols=59 Identities=10% Similarity=0.129 Sum_probs=43.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 70 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~ 70 (583)
|-+++.||.+....+.+ ++ .+|.+++|+|.++..+++..|.++..++- |. .++|++.+.
T Consensus 147 t~G~~~al~~~~~~l~~--pg-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~--~g~~~~~l~ 205 (431)
T PRK15481 147 TSGAIDAIERLLCAHLL--PG-DSVAVEDPCFLSSINMLRYAGFSASPVSV-DA--EGMQPEKLE 205 (431)
T ss_pred ecCcHHHHHHHHHHhCC--CC-CEEEEeCCCcHHHHHHHHHcCCeEEeecc-CC--CCCCHHHHH
Confidence 34556667666665543 55 68999999999999999999999988876 43 256665443
No 428
>PRK07324 transaminase; Validated
Probab=78.01 E-value=3.3 Score=43.65 Aligned_cols=63 Identities=16% Similarity=0.112 Sum_probs=47.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
+-|-++|+|+.++...+.+ ++ .+|.+++|+|..+..+.+..|.++..++.-....-.+|.+.+
T Consensus 84 i~t~G~~~al~~~~~~l~~--~g-d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l 146 (373)
T PRK07324 84 LQTNGATGANFLVLYALVE--PG-DHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDEL 146 (373)
T ss_pred EEcCChHHHHHHHHHHhCC--CC-CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 3566788999988887744 55 679999999999999999999998887764332223566544
No 429
>PLN02231 alanine transaminase
Probab=77.89 E-value=4.3 Score=45.07 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=51.5
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCC-cccchhhhHHHHHhh
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKT-NGLDFAGMMEDIKLA 76 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~-~~~d~~~~~~~~~~a 76 (583)
|-++++||.+...+|.+ -++ ..|.+++|+|.+|...++..|.++..|+- |+.+ -++|++.+.+.++.+
T Consensus 197 T~Ga~~ai~~~~~~l~~-~~g-d~Vli~~P~Y~~y~~~~~~~g~~~v~~~l-~~~~~~~~d~~~Le~~l~~~ 265 (534)
T PLN02231 197 TDGASPAVHMMMQLLIR-SEK-DGILCPIPQYPLYSASIALHGGTLVPYYL-DEATGWGLEISELKKQLEDA 265 (534)
T ss_pred eCCHHHHHHHHHHHhcc-CCC-CEEEEeCCCChhHHHHHHHcCCEEEEEec-CcccCCCCCHHHHHHHHHHH
Confidence 45678888888887753 134 67999999999999999999999888854 4433 478888876666543
No 430
>PRK09148 aminotransferase; Validated
Probab=77.56 E-value=4 Score=43.53 Aligned_cols=49 Identities=10% Similarity=0.090 Sum_probs=40.8
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 57 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~ 57 (583)
|-+++.+|.+.+..|.+ ++ .+|.+++|+|.++..+++..|.++..++-.
T Consensus 98 t~G~~~al~~~~~~l~~--~g-d~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~ 146 (405)
T PRK09148 98 TLGSKEGFANMAQAITA--PG-DVILCPNPSYPIHAFGFIMAGGVIRSVPAE 146 (405)
T ss_pred cCChHHHHHHHHHHhcC--CC-CEEEEcCCCCcccHHHHHhcCCEEEEEeCC
Confidence 45668888888887754 55 689999999999999999999999888764
No 431
>PRK07682 hypothetical protein; Validated
Probab=77.56 E-value=3.5 Score=43.43 Aligned_cols=63 Identities=14% Similarity=0.067 Sum_probs=46.8
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
|-+||.||.+....+.+ ++ .+|-+++|+|.++..+++..|.++..++.-....-++|++.+.+
T Consensus 87 t~G~~~al~~~~~~l~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 149 (378)
T PRK07682 87 TVGASQALDVAMRAIIN--PG-DEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEA 149 (378)
T ss_pred eCChHHHHHHHHHHhCC--CC-CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHh
Confidence 55678999988876644 55 68999999999999999999988877774222234567665443
No 432
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=77.46 E-value=4 Score=44.40 Aligned_cols=46 Identities=22% Similarity=0.247 Sum_probs=32.1
Q ss_pred cccchhhhHHHHHHHhCCCCcEEEeCCCCCCChHhHhhhcCCccccccc
Q psy14428 82 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 130 (583)
Q Consensus 82 ~gtgal~~~~~~~~~~~~~~~~~~i~~ptw~nh~~if~~~g~~~~~y~Y 130 (583)
|.+.||.+.+..+-. |+ .+|+|-+||+....++|+..|+++..-+.
T Consensus 163 G~q~al~l~~~~l~~--pG-d~v~vE~PtY~~~~~~~~~~g~~~~~vp~ 208 (459)
T COG1167 163 GAQQALDLLLRLLLD--PG-DTVLVEDPTYPGALQALEALGARVIPVPV 208 (459)
T ss_pred CHHHHHHHHHHHhCC--CC-CEEEEcCCCcHHHHHHHHHcCCcEEecCC
Confidence 334444444443322 44 78999999999999999999988877665
No 433
>PRK08068 transaminase; Reviewed
Probab=77.04 E-value=4.2 Score=43.00 Aligned_cols=61 Identities=16% Similarity=0.235 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 10 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 10 tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+.++.+....+.+ ++ .+|.+++|+|.++...++..|.++..++..+...-.+|++.+.+.+
T Consensus 104 ~~~l~~~~~~~~~--~g-d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 164 (389)
T PRK08068 104 KAGLVELPQCLMN--PG-DTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEV 164 (389)
T ss_pred HHHHHHHHHHhCC--CC-CEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhc
Confidence 3455444333322 44 6899999999999999999999999998743323346777765544
No 434
>PRK08960 hypothetical protein; Provisional
Probab=76.11 E-value=4.8 Score=42.56 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=46.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCC-CcccchhhhHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMME 71 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~-~~~~d~~~~~~ 71 (583)
|-++|.||.+....+.+ ++ .+|.+++|+|.++..+++..|.++..++. +.. .-.+|.+.+.+
T Consensus 98 t~G~~~al~~~~~~~~~--~g-d~vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~ 160 (387)
T PRK08960 98 TPGGSGALLLASSLLVD--PG-KHWLLADPGYPCNRHFLRLVEGAAQLVPV-GPDSRYQLTPALVER 160 (387)
T ss_pred ccCcHHHHHHHHHHhcC--CC-CEEEEcCCCCcchHHHHHhcCCeEEEEec-CcccCCCCCHHHHHH
Confidence 44678899888776633 55 68999999999999999999998888875 332 22466665543
No 435
>PLN00175 aminotransferase family protein; Provisional
Probab=76.06 E-value=3.8 Score=43.90 Aligned_cols=61 Identities=8% Similarity=0.022 Sum_probs=44.4
Q ss_pred ccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 7 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 7 ~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
-++|+||.+...-+.+ ++ .+|.+++|+|.++...++..|.++..++.... ...+|++.+.+
T Consensus 122 ~G~~~al~~~~~~l~~--~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~ 182 (413)
T PLN00175 122 SGCTEAIAATILGLIN--PG-DEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKA 182 (413)
T ss_pred CCHHHHHHHHHHHhCC--CC-CEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHH
Confidence 3457888776654422 55 68999999999999999999999998886433 24566655433
No 436
>PLN02368 alanine transaminase
Probab=75.69 E-value=5.5 Score=42.58 Aligned_cols=66 Identities=14% Similarity=0.071 Sum_probs=46.3
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
+++.||.+....+.. -++ .+|.+++|+|.++..+++..|.++..++.-....-++|++.+-+.++.
T Consensus 138 Ga~~al~~~~~~l~~-~pG-d~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~ 203 (407)
T PLN02368 138 GASKGVMQILNAVIR-GEK-DGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQ 203 (407)
T ss_pred cHHHHHHHHHHHHcC-CCC-CEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHH
Confidence 344466666554421 145 679999999999999999999998888754333346788776666553
No 437
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=75.37 E-value=5.9 Score=41.30 Aligned_cols=60 Identities=12% Similarity=0.218 Sum_probs=41.4
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
+|.+|++....+.+ ++..+|.+++|+|+.+....+..|.++..++.-+ .-++|++.+.+.
T Consensus 83 s~e~i~~~~~~~~~--~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~ 142 (351)
T PRK01688 83 ADEGIELLIRAFCE--PGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADN 142 (351)
T ss_pred HHHHHHHHHHHhcC--CCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHh
Confidence 34455555543322 3335799999999999999999999988887632 246777766543
No 438
>PRK07568 aspartate aminotransferase; Provisional
Probab=74.33 E-value=5.5 Score=42.19 Aligned_cols=51 Identities=16% Similarity=0.256 Sum_probs=41.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 57 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~ 57 (583)
+-|-+||.||.+....+.+ ++ .+|.+++|+|.++..+++..|.++..++..
T Consensus 92 ~~t~G~~~al~~~~~~l~~--~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 142 (397)
T PRK07568 92 LITNGGSEAILFAMMAICD--PG-DEILVPEPFYANYNGFATSAGVKIVPVTTK 142 (397)
T ss_pred EEcCChHHHHHHHHHHhcC--CC-CEEEEecCCCccHHHHHHHcCCEEEEeecC
Confidence 3466889999998877633 55 679999999999999999999998887753
No 439
>PRK12566 glycine dehydrogenase; Provisional
Probab=73.99 E-value=2e+02 Score=34.26 Aligned_cols=186 Identities=12% Similarity=0.062 Sum_probs=98.3
Q ss_pred cccCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCCC-----CC----HHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 166 MNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANIG-----GD----AKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 166 i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~-----G~----~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
.-++.|.++. ..|..+.+.+ ++++. ...|+|.+ |. -++...|++.. |.++....+
T Consensus 82 ~fiG~G~y~~-----~~P~vi~~~i---~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt----Gm~vaNASl--- 146 (954)
T PRK12566 82 SLIGMGYHGT-----VTPTVILRNV---LENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT----GLDLANASL--- 146 (954)
T ss_pred ccccccccCC-----cCcHHHHHHH---HhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh----Cchhhhhhh---
Confidence 4467777753 2455563433 33322 34566644 43 34445555544 444332222
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cCCeEEEEecccCCCCCCChhhHHHHHHcCCCCc
Q psy14428 236 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERS 311 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~ 311 (583)
--|++.+-+.+.+..+....+..+|+|++-..+.+..+++. .|++++.- | +++.+ ...+
T Consensus 147 -~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~----------~---~~~~~---~~~~ 209 (954)
T PRK12566 147 -LDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVD----------A---VDNLA---AHAV 209 (954)
T ss_pred -ccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEc----------c---hhhcC---CCCE
Confidence 23555554433212222222246899999899988876654 45555531 1 11212 2356
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH--HHhcCcEEEEe---cCccc
Q psy14428 312 ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF--AKEVGQLCLAQ---SFSKN 386 (583)
Q Consensus 312 ~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~--~~~~~~vi~i~---S~SK~ 386 (583)
..+++.+|+ =.|.+ +++++|.+++.+++.++| +-+ ++.++--+ +.+.+--|+++ +|.=-
T Consensus 210 ~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~-~~~-----------d~laL~ll~~Pge~GADI~vG~~Q~fGvp 273 (954)
T PRK12566 210 FGALLQYPD-THGEI---RDLRPLIDQLHGQQALAC-VAA-----------DLLSLLVLTPPGELGADVVLGSTQRFGVP 273 (954)
T ss_pred EEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEE-EEe-----------CHHHHhCCCChhhcCCcEEeeCCCcCCCC
Confidence 677777775 45766 468888999999887755 222 11111111 23344456666 34444
Q ss_pred ccccCccceEEEE
Q psy14428 387 MGLYGERVGTFSV 399 (583)
Q Consensus 387 ~~l~GlRiG~lv~ 399 (583)
+|.-|=-.|++.+
T Consensus 274 ~~~GGP~ag~~a~ 286 (954)
T PRK12566 274 MGYGGPHAAYFAC 286 (954)
T ss_pred CCCCCCCeeeeee
Confidence 4445667899888
No 440
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=73.65 E-value=5.9 Score=42.32 Aligned_cols=62 Identities=13% Similarity=0.272 Sum_probs=44.7
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 70 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~ 70 (583)
|-+++.||.+....+.. ++ ..|.+++|+|.++..+++..|.++..++.-+...-.+|++.+-
T Consensus 103 t~G~~~al~~~~~~l~~--~g-d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 164 (409)
T PLN00143 103 TLGCKHAAEIIIKVLAR--PE-ANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVE 164 (409)
T ss_pred ecChHHHHHHHHHHHcC--CC-CEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHH
Confidence 34556677777665543 55 6899999999999999999999988877532222347777663
No 441
>PRK05764 aspartate aminotransferase; Provisional
Probab=73.64 E-value=5.7 Score=42.00 Aligned_cols=65 Identities=15% Similarity=0.095 Sum_probs=47.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
|=|+|.|+.+...-+.+ ++ .+|.+++|+|..+..+++..|.++..++.-......+|.+.+.+.+
T Consensus 97 ~~g~~~a~~~~~~~~~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 161 (393)
T PRK05764 97 TTGAKQALYNAFMALLD--PG-DEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAI 161 (393)
T ss_pred eCCcHHHHHHHHHHhcC--CC-CEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhh
Confidence 44667888877665433 44 6899999999999999999999999988743333456766655433
No 442
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=72.87 E-value=28 Score=35.39 Aligned_cols=58 Identities=5% Similarity=0.001 Sum_probs=38.6
Q ss_pred CCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC-EEEEcCCCChhhHHHHhhcCCeEEEEec
Q psy14428 226 AFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK-TVYFPTPTWNGHVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 226 ~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 287 (583)
.+.|...+|.+|+|.+ ++.++ +...... -+ .+.+|+-.-.....+++.+|++++.+|-
T Consensus 58 ~l~pG~tIVE~TSGNT-GI~LA--~vaa~~G-y~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 58 LLKPGGTIVEATSGNT-GIALA--MVAAAKG-YRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCCEEEEcCCChH-HHHHH--HHHHHcC-CcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 4677888888888777 55554 3333222 23 3344554566778899999999998876
No 443
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=72.48 E-value=7.2 Score=42.42 Aligned_cols=67 Identities=9% Similarity=-0.006 Sum_probs=49.9
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc--------CCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF--------DNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~--------~~~~~~~d~~~~~~~~~ 74 (583)
+.|-|||+|++++..-|-+ |+. |.+++|.|.++....+.+|.++...+-- ++-++.+|++.+-+.+.
T Consensus 97 v~t~ggt~A~~~~~~all~--pGD--Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~ 171 (460)
T PRK13238 97 IPTHQGRAAEQILFPVLIK--KGD--VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIE 171 (460)
T ss_pred EECCCHHHHHHHHHHHhCC--CCC--EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHh
Confidence 6788999999998765533 664 8899999999999999999876655432 23345588877766554
No 444
>PRK06348 aspartate aminotransferase; Provisional
Probab=72.47 E-value=6.9 Score=41.31 Aligned_cols=63 Identities=8% Similarity=0.041 Sum_probs=44.5
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+++.||.+....+.+ ++ .+|.+++|+|.++...++..|.++..++..+...-.+|++.+.+.+
T Consensus 97 G~~~al~~~~~~~~~--~g-d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~ 159 (384)
T PRK06348 97 GACHGMYLALQSILD--PG-DEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALI 159 (384)
T ss_pred ChHHHHHHHHHHhcC--CC-CEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhh
Confidence 445555555554432 45 6899999999999999999999888877654444457777665433
No 445
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=72.43 E-value=5.3 Score=42.13 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=51.0
Q ss_pred ccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 7 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 7 ~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
-|||.||+++...|. .-++ ..|.+++|+|..+...++..|.++..+.- |+.+..+|.+.+.+.++
T Consensus 51 ~sgt~al~~~l~al~-~~~G-d~Viv~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~d~~~l~~~i~ 115 (380)
T TIGR03588 51 NSATSALHIACLALG-VGPG-DRVWTTPITFVATANCALYCGAKVDFVDI-DPDTGNIDEDALEKKLA 115 (380)
T ss_pred cCHHHHHHHHHHHcC-CCCC-CEEEeCCcchHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHHhh
Confidence 389999999988662 1144 57999999999999889999998887764 55677788888776665
No 446
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=72.38 E-value=6.7 Score=41.27 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=43.8
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
++.||.+....+ ..++..+|.+++|+|..+..+++..|.++..++. ++.+-++|++.+-+.++
T Consensus 100 a~~al~~~~~~~--~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~ 162 (374)
T PRK02610 100 SDELIRSLLIAT--CLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGR-DPETFEIDLAAAQSAIE 162 (374)
T ss_pred hHHHHHHHHHHH--cCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecC-CcccCCCCHHHHHHHHH
Confidence 344555333322 2244337999999999999999999999988874 55456788877655443
No 447
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=72.06 E-value=10 Score=41.12 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=48.8
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhh-cCCCceeeeeccCCCCcccchhhhHHHHHhhh
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDNKTNGLDFAGMMEDIKLAI 77 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~-~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~a~ 77 (583)
-|-++|+||.+.+..|.. |+ ..|.+++|+|+++...+. ..|.++-.++.-....-.+|++.+-+.++.|.
T Consensus 125 it~G~t~al~~l~~~l~~--pG-D~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~ 195 (447)
T PLN02607 125 LTAGATAANELLTFILAD--PG-DALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAE 195 (447)
T ss_pred EcCChHHHHHHHHHHhCC--CC-CEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHH
Confidence 456678888887776654 66 689999999999998887 57888766554222222477777766666553
No 448
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=72.03 E-value=4.9 Score=42.51 Aligned_cols=66 Identities=17% Similarity=0.153 Sum_probs=50.7
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-|||.||+++...+. .-++ .+|.+++|+|..+...+...|.++.... .|+.+..+|.+.+.+.+.
T Consensus 54 ~~sgt~al~lal~al~-~~~G-d~Viv~~~~~~~~~~~~~~~G~~~v~vd-~~~~~~~~d~~~l~~~i~ 119 (379)
T PRK11658 54 VSSATAGMHITLMALG-IGPG-DEVITPSLTWVSTLNMIVLLGATPVMVD-VDRDTLMVTPEAIEAAIT 119 (379)
T ss_pred ECCHHHHHHHHHHHcC-CCCC-CEEEECCCcHHHHHHHHHHcCCEEEEEe-cCCCcCCcCHHHHHHhcc
Confidence 5689999999987662 1145 5799999999999999999999887775 356666688887766543
No 449
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=71.95 E-value=5.8 Score=41.19 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=45.5
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 70 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~ 70 (583)
|-++|-||.+.+..+.+ ++ ..|.+++|+|+++..+++..|.++..++.-+ ..++|.+.+.
T Consensus 83 t~G~~~al~~~~~~l~~--~g-d~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~ 142 (353)
T PRK05387 83 GNGSDEVLAHAFLAFFN--HD-RPLLFPDITYSFYPVYAGLYGIPYEEIPLDD--DFSIDVEDYL 142 (353)
T ss_pred cCCHHHHHHHHHHHhcC--CC-CEEEEeCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHH
Confidence 44566777777766543 55 6799999999999999999999998888632 3567877653
No 450
>PRK08363 alanine aminotransferase; Validated
Probab=71.48 E-value=5.7 Score=42.20 Aligned_cols=61 Identities=15% Similarity=0.171 Sum_probs=44.7
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
++|.||.+....+.+ ++ .+|.+++|+|..+..+++..|..+-.|...+.....+|.+.+.+
T Consensus 101 G~~~al~~~~~~~~~--~g-d~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~ 161 (398)
T PRK08363 101 AVTEALQLIFGALLD--PG-DEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRK 161 (398)
T ss_pred CHHHHHHHHHHHhCC--CC-CEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHh
Confidence 457788877766533 55 68999999999999999999988777755555444567665543
No 451
>PRK09105 putative aminotransferase; Provisional
Probab=70.31 E-value=6.2 Score=41.53 Aligned_cols=59 Identities=15% Similarity=0.121 Sum_probs=44.8
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhh
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
|-++|.+|.+....+.+ ++ .+|-+++|+|..+..+++..|.++..++..+ ...+|++.+
T Consensus 101 t~Gs~~ai~~~~~~l~~--~g-d~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l 159 (370)
T PRK09105 101 YAGSSEPLNYAVLAFTS--PT-AGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAM 159 (370)
T ss_pred cCChHHHHHHHHHHHcC--CC-CEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHH
Confidence 34678888888876644 55 5799999999999999999999998887643 234555444
No 452
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=69.54 E-value=7 Score=41.02 Aligned_cols=61 Identities=11% Similarity=0.097 Sum_probs=44.2
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCC-cccchhhhHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKT-NGLDFAGMME 71 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~-~~~d~~~~~~ 71 (583)
++.+|++....+.. ++..+|.+++|+++.+..+++..|.++..++..++.. -.+|++.+++
T Consensus 85 ~~~~l~~~~~~~~~--~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~ 146 (364)
T PRK04781 85 SDEAIDLLVRALCV--PGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVA 146 (364)
T ss_pred HHHHHHHHHHHhcC--CCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHH
Confidence 37778777765533 4425799999999999999999999999998754432 2367766543
No 453
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=68.57 E-value=6.7 Score=40.58 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=42.9
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
++|.++.+....|.+ ++ .+|.+++|+|+.+..+.+..|.++..++..+. ..+|++.+.+
T Consensus 79 G~~~~l~~~~~~l~~--~g-d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~ 137 (346)
T TIGR01141 79 GSDEIIELLIRAFLE--PG-DAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILV 137 (346)
T ss_pred CHHHHHHHHHHHhcC--CC-CEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHH
Confidence 455666555544433 44 68999999999999999999999988876443 4577777655
No 454
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=67.74 E-value=11 Score=39.77 Aligned_cols=62 Identities=15% Similarity=0.022 Sum_probs=41.8
Q ss_pred chhHHHHHHHHHHhhcCCCe-EEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVK-TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~-~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
++.||.+....+.+ ++.+ .|.+++|+|.++..+++..|.++..++--+..--.+|++.+.+.
T Consensus 99 a~~al~~~~~~l~~--~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 161 (393)
T TIGR03538 99 TREALFAFAQAVIN--PGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPES 161 (393)
T ss_pred cHHHHHHHHHHHcC--CCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHH
Confidence 45556655554433 4532 49999999999999999999998888763221124666665544
No 455
>PRK05942 aspartate aminotransferase; Provisional
Probab=67.53 E-value=11 Score=40.08 Aligned_cols=62 Identities=16% Similarity=0.179 Sum_probs=42.9
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
+++.||.+.+..+.+ ++ .+|.+++|+|.++...++..|.++..++.-....-.+|++.+.+.
T Consensus 105 G~~~al~~~~~~~~~--~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 166 (394)
T PRK05942 105 GSKEGLTHLALAYVN--PG-DVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEE 166 (394)
T ss_pred ChHHHHHHHHHHhCC--CC-CEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHh
Confidence 345666655544422 45 689999999999999999999998888763222234777776544
No 456
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=66.75 E-value=13 Score=39.52 Aligned_cols=60 Identities=13% Similarity=0.014 Sum_probs=42.6
Q ss_pred cchhHHHHHHHHHHhhcC---CCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCC-cccchhhhHH
Q psy14428 8 SGSGSLRVGTAFLERFYP---GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKT-NGLDFAGMME 71 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~---~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~-~~~d~~~~~~ 71 (583)
+++.||.+....+.+ + + ..|.+++|+|.++..+++..|.++..++. ++++ -++|++.+.+
T Consensus 98 G~~~al~~~~~~l~~--~~~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~vp~-~~~~~~~~d~~~l~~ 161 (396)
T PRK09147 98 GSREALFAFAQTVID--RDGPG-PLVVCPNPFYQIYEGAALLAGAEPYFLNC-DPANNFAPDFDAVPA 161 (396)
T ss_pred ChHHHHHHHHHHHcC--CCCCC-CEEEEcCCCccchHHHHHhcCCEEEEecc-CccccCccCHHHHHH
Confidence 445566555554433 4 3 57999999999999999999999888886 3333 2577776544
No 457
>PRK06225 aspartate aminotransferase; Provisional
Probab=66.22 E-value=8.5 Score=40.52 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=47.5
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCC-CcccchhhhHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMME 71 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~-~~~~d~~~~~~ 71 (583)
+-|||.|+.+++..+.+ ++ .+|-+++|+|..+...++..|.++..++-.+.. ...+|.+.+.+
T Consensus 89 ~~g~t~al~~~~~~~~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~ 152 (380)
T PRK06225 89 TAGATESLYLVMRAFLS--PG-DNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKE 152 (380)
T ss_pred eCCHHHHHHHHHHHhcC--CC-CEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHh
Confidence 45889999998887643 44 679999999999999999999998888754332 23577665544
No 458
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=64.81 E-value=9.2 Score=39.83 Aligned_cols=56 Identities=16% Similarity=0.179 Sum_probs=39.4
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 70 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~ 70 (583)
++.+|.+.+..+.+ ++ .+|.+++|+|.++...+...|.++..++.. +.++|++.+.
T Consensus 90 ~~~~l~~~~~~~~~--~g-d~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~ 145 (359)
T PRK03158 90 LDEVIQMISRALLN--PG-TNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAML 145 (359)
T ss_pred HHHHHHHHHHHHhC--CC-CEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHH
Confidence 34555544433322 44 689999999999999999999999988874 3466766543
No 459
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=64.73 E-value=10 Score=41.93 Aligned_cols=60 Identities=15% Similarity=0.118 Sum_probs=41.2
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 70 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~ 70 (583)
+++.+|.+....|.. ++ .+|.+++|+|..+...++..|.++..|+.-....-.+|++.+.
T Consensus 216 G~~eal~~~~~~l~~--~G-d~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~ 275 (517)
T PRK13355 216 GVSELINLSMSALLD--DG-DEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIR 275 (517)
T ss_pred cHHHHHHHHHHHhCC--CC-CEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHH
Confidence 445566666655533 55 6899999999999999999999887776422222345665443
No 460
>PRK08246 threonine dehydratase; Provisional
Probab=64.50 E-value=84 Score=32.15 Aligned_cols=75 Identities=15% Similarity=0.014 Sum_probs=48.1
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEE
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 283 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 283 (583)
.+.|.-..|-++........ ....|+. .++|+.++.++. ......-.-.|++|...-..-...++.+|++++
T Consensus 47 nptGS~K~R~a~~~~~~~~~----~~~~vv~--aSsGN~g~a~A~--~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~ 118 (310)
T PRK08246 47 QHTGSFKARGAFNRLLAAPV----PAAGVVA--ASGGNAGLAVAY--AAAALGVPATVFVPETAPPAKVARLRALGAEVV 118 (310)
T ss_pred CCCCCCHHHHHHHHHHhhcc----cCCeEEE--eCCCHHHHHHHH--HHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEE
Confidence 34566677777665543322 3345666 788888888763 323222234677776666666788899999998
Q ss_pred EEe
Q psy14428 284 AYR 286 (583)
Q Consensus 284 ~v~ 286 (583)
.++
T Consensus 119 ~~~ 121 (310)
T PRK08246 119 VVG 121 (310)
T ss_pred EeC
Confidence 774
No 461
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=64.46 E-value=1.9e+02 Score=30.22 Aligned_cols=112 Identities=15% Similarity=0.190 Sum_probs=65.2
Q ss_pred eEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhcccc
Q psy14428 344 LYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYS 423 (583)
Q Consensus 344 i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~ 423 (583)
.++|+|-.-.-|... ..+. .--++-.|.-|++|-.| ++.++. . +++++++....
T Consensus 171 ~~~v~D~SS~ilsr~------iDvs------k~dviyagaQKnlGpaG--ltvvIv--r-----~~~l~r~~~~~----- 224 (365)
T COG1932 171 GLLVADASSAILSRP------IDVS------KYDVIYAGAQKNLGPAG--LTVVIV--R-----PDLLERAESYT----- 224 (365)
T ss_pred ceEEEecccHHhcCC------CChh------HcceEEEehhhccCccc--eEEEEE--c-----HHHHhcccccC-----
Confidence 778888764333221 1111 12345567899999888 888888 5 57888776542
Q ss_pred CCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHH-HhhccCCCccchhhHHHHhcCChhHHHHHHHH---HHHHHHHH
Q psy14428 424 NPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL-IRGFYSNPPIHGARIVTEILSDPKLKAQWFEE---CKGMSNRI 499 (583)
Q Consensus 424 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~-~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~---l~~~~~~~ 499 (583)
.++.+- ..... -...+..||..+-|.+..++ +|.+. ++.+.+|-
T Consensus 225 ~P~if~-------------------------y~~~~~~~s~yNTPptfa~y~~~lv~-------~Wlk~~GGl~~~~~rn 272 (365)
T COG1932 225 LPSIFD-------------------------YLTHADNGSMYNTPPTFAWYLLGLVF-------KWLKSQGGLEALEARN 272 (365)
T ss_pred CchHhh-------------------------chhhhccCCccCCcHHHHHHHHHHHH-------HHHHHcCCHHHHHHHH
Confidence 111110 00000 11345566665555544333 35543 57788888
Q ss_pred HHHHHHHHHHHHhc
Q psy14428 500 SSIREELKSKILDK 513 (583)
Q Consensus 500 ~~~r~~l~~~L~~~ 513 (583)
.++.++|.+.+.+.
T Consensus 273 ~~ka~~LY~~id~s 286 (365)
T COG1932 273 QAKAQLLYDWIDKS 286 (365)
T ss_pred HHHHHHHHHHHHhC
Confidence 89999999998774
No 462
>PRK08354 putative aminotransferase; Provisional
Probab=63.63 E-value=8.7 Score=39.23 Aligned_cols=44 Identities=11% Similarity=0.002 Sum_probs=33.3
Q ss_pred ccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeee
Q psy14428 7 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAY 54 (583)
Q Consensus 7 ~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y 54 (583)
-+++.||.+.+.++ .++ .+|.+++|+|.++..+++..|.++..+
T Consensus 61 ~G~~~al~~~~~~~---~~g-d~vlv~~P~y~~~~~~~~~~g~~~~~~ 104 (311)
T PRK08354 61 AGITEALYLIGILA---LRD-RKVIIPRHTYGEYERVARFFAARIIKG 104 (311)
T ss_pred CCHHHHHHHHHHhh---CCC-CeEEEeCCCcHHHHHHHHHcCCEEeec
Confidence 34566776655433 255 689999999999999999999988543
No 463
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=62.34 E-value=13 Score=39.50 Aligned_cols=48 Identities=15% Similarity=0.098 Sum_probs=40.8
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 56 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~ 56 (583)
|.+++.||.++...+-. |+ ..|-+++|.|.+|..+.+.+|.++-.++=
T Consensus 95 t~Ga~~al~~~~~a~~~--pG-DeVlip~P~Y~~y~~~~~~~gg~~v~v~l 142 (393)
T COG0436 95 TAGAKEALFLAFLALLN--PG-DEVLIPDPGYPSYEAAVKLAGGKPVPVPL 142 (393)
T ss_pred eCCHHHHHHHHHHHhcC--CC-CEEEEeCCCCcCHHHHHHhcCCEEEEEeC
Confidence 67889999999888755 66 57999999999999999999988666653
No 464
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=62.07 E-value=12 Score=38.82 Aligned_cols=61 Identities=10% Similarity=0.123 Sum_probs=43.4
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
.|.+|.+.+..+.+ ++ .+|-+++|+|.++...++..|.++..++-- .+.++|++.+.+.++
T Consensus 85 ~~~~l~~~~~~l~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~ 145 (351)
T PRK14807 85 SDEIIHLIMLAFIN--KG-DVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIE 145 (351)
T ss_pred HHHHHHHHHHHhcC--CC-CEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhh
Confidence 35556666655533 55 679999999999999999999888776542 235678777665543
No 465
>KOG2467|consensus
Probab=61.96 E-value=2.1e+02 Score=29.97 Aligned_cols=191 Identities=12% Similarity=0.077 Sum_probs=96.9
Q ss_pred CChHHHHHHHHHhccCCCCCCCC--CCCCHHHHHHHHHHHhC----CCCCCCCCC----CeEEEecCCchhHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYAN--IGGDAKFCKLAAQLAYG----EDFPAFKDN----RLAIVQGISGSGSLRVGTAFL 251 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~Lr~aia~~~~~----~~g~~~~~~----~I~i~~t~G~~~al~l~~~~l 251 (583)
....+.+++-..+.+....+|+. ..|=-++.+.+-.+.++ .++ ++|+ ||-. -+|+. |-.. ..
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~--ldp~kWGVNVQp--~SGSP-ANfa---vY 123 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG--LDPEKWGVNVQP--YSGSP-ANFA---VY 123 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhC--CCHHHCceeecc--CCCCc-hhhH---HH
Confidence 44678888877776533333432 11222333333222221 233 3343 3333 45554 4333 34
Q ss_pred HHhCCCCCEEEEcC-CCChhhHHHH----hhcC-----CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 252 ERFYPGVKTVYFPT-PTWNGHVRFC----TDSR-----LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 252 ~~~~~~gd~Vlv~~-P~y~~~~~~~----~~~G-----~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
..+++|+++|+--+ |.=.-...-+ +..- .+-.++.+ |+++.-+|.+.|++.... -++++++-
T Consensus 124 tall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv-~~~TG~IDYD~Le~~A~~--frPk~iia----- 195 (477)
T KOG2467|consen 124 TALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV-DPSTGYIDYDKLEKTATL--FRPKLIIA----- 195 (477)
T ss_pred hhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceee-CCCCCceehHHHHHHHHh--cCCcEEEe-----
Confidence 55677789887443 3311111001 1111 11223444 666777899999886643 34556652
Q ss_pred CCCCCCCHH-HHHHHHHHHHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 322 PTGVDLSED-QWRQLAVVVKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 322 PTG~~~s~~-~~~~l~~~a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
-+..+++. +..++.++|.+-+.+++.|.++. .++-.+. -+.++. -.-|+..+--|++ -|-|-|.+.-
T Consensus 196 -G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~v--ipsPFe------y~DiVTTTTHKsL--RGPRg~mIFy 264 (477)
T KOG2467|consen 196 -GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGV--IPSPFE------YCDIVTTTTHKSL--RGPRGAMIFY 264 (477)
T ss_pred -ccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhccc--CCCccc------ccceeeccccccc--cCCcceeEEE
Confidence 22334333 33455566778899999999873 3433221 111111 1246667778875 7888887765
No 466
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=61.10 E-value=1.5e+02 Score=28.66 Aligned_cols=148 Identities=15% Similarity=0.006 Sum_probs=72.0
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEE----E---------cCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVY----F---------PTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 303 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vl----v---------~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~ 303 (583)
.+||..+...+..+++. .+.+. + -.|.-.-....++..|+.++.+++ ..+ ..--.+.+.+.
T Consensus 7 ~SGGKDS~lAl~~a~~~----~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~-~g~-~~~~~~~l~~~ 80 (218)
T PF01902_consen 7 WSGGKDSCLALYRALRQ----HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPT-SGD-EEDYVEDLKEA 80 (218)
T ss_dssp --SSHHHHHHHHHHHHT-----EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE-----CCCHHHHHHHH
T ss_pred EcCcHHHHHHHHHHHHh----CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEc-cCc-cchhhHHHHHH
Confidence 78998887765434333 22211 1 111122345567888999998888 321 11135667677
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecC
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
+++. +...++ +|.+.+.+.+..+-+.|.+.|+-. +.+++-.+ ...-+..+.+.+-..+++.--
T Consensus 81 l~~~--~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~-----~~PLW~~d---~~~ll~e~i~~Gf~aiIv~V~ 143 (218)
T PF01902_consen 81 LKEL--KVEAVV-------FGDIDSEYQRNWVERVCERLGLEA-----VFPLWGRD---REELLREFIESGFEAIIVKVD 143 (218)
T ss_dssp HCTC----SEEE---------TTS-HHHHHHHHHHHHHCT-EE-----E-TTTT-----HHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHc--CCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEE-----EecccCCC---HHHHHHHHHHCCCeEEEEEEe
Confidence 7543 245555 899999999999999999999854 45776543 223345555543333333221
Q ss_pred cccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 384 SKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 384 SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
+. +++.-=+|=.+. +++++.|...
T Consensus 144 ~~--~L~~~~LGr~l~--------~e~i~~L~~~ 167 (218)
T PF01902_consen 144 AD--GLDESFLGRELD--------RELIEELPEL 167 (218)
T ss_dssp ST--T--GGGTT-B----------HHHHHHHHHH
T ss_pred cc--CCChHHCCCCcc--------HHHHHHHHHH
Confidence 21 222222454443 4777777765
No 467
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=60.67 E-value=13 Score=39.08 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=48.4
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+=|||.||.+++..+. .-++ .+|.++.|||......+...|.++..+. .|+.+..+|.+.+-+.+
T Consensus 52 ~~sgt~al~~~l~~~~-~~~G-d~Viv~~~t~~~~~~~~~~~G~~~v~~d-~d~~~~~~d~~~le~~i 116 (375)
T PRK11706 52 TPSCTAALEMAALLLD-IQPG-DEVIMPSYTFVSTANAFVLRGAKIVFVD-IRPDTMNIDETLIEAAI 116 (375)
T ss_pred ECCHHHHHHHHHHHhC-CCCC-CEEEECCCCcHHHHHHHHHcCCEEEEEe-cCCCcCCcCHHHHHHhc
Confidence 4489999988765441 1144 6899999999999999999999987654 46666667777765554
No 468
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=60.61 E-value=14 Score=38.43 Aligned_cols=46 Identities=24% Similarity=0.242 Sum_probs=36.8
Q ss_pred CCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 25 PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 25 ~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
++ .+|.+++|+|.++..+++..|.++..++..+ ..++|++.+.+.+
T Consensus 104 ~g-d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~~ 149 (356)
T PRK04870 104 PG-ATVLAPEPGFVMYRMSAKLAGLEFVGVPLTA--DFTLDLPAMLAAI 149 (356)
T ss_pred CC-CEEEECCCCHHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHh
Confidence 44 6799999999999999999999998888632 3568887765544
No 469
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=60.20 E-value=28 Score=38.48 Aligned_cols=41 Identities=10% Similarity=0.017 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 491 ECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 491 ~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+++++++++++|+.+.+.| +. .+....+++|+|.|.+++.
T Consensus 403 y~~~~~~~~~~R~~~l~~~L---g~--~~~~~~~~g~~Y~~~di~~ 443 (521)
T TIGR03801 403 YKAETKDICRRREKLLFRGL---GL--PLQEDPNDVAYYTLIDLEE 443 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhc---CC--CCcCCCCCeEEEEEeehHH
Confidence 36778889999999999887 32 1334568999999998863
No 470
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=60.19 E-value=16 Score=38.64 Aligned_cols=60 Identities=15% Similarity=0.093 Sum_probs=40.6
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+|.+|.+....+.+ ++ .+|.+++|+|+.+....+..|.++..++. + ..-++|++.+.+.+
T Consensus 112 a~~~i~~~~~~~~~--~g-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~~ 171 (380)
T PLN03026 112 ADELIDLLMRCVLD--PG-DKIIDCPPTFGMYVFDAAVNGAEVIKVPR-T-PDFSLDVPRIVEAV 171 (380)
T ss_pred HHHHHHHHHHHhcC--CC-CEEEEcCCChHHHHHHHHHcCCEEEEeec-C-CCCCcCHHHHHHHH
Confidence 34455554443322 44 67999999999999999999999888876 2 22456666654433
No 471
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=60.16 E-value=12 Score=38.18 Aligned_cols=53 Identities=21% Similarity=0.191 Sum_probs=44.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCC
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN 59 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~ 59 (583)
+.+=|||.|+......+.+ ++ .+|++++|.|.+|..+++..|.++..++..+.
T Consensus 63 ~~~~~~t~a~~~~~~~~~~--~g-~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (350)
T cd00609 63 VVTNGAQEALSLLLRALLN--PG-DEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE 115 (350)
T ss_pred EEecCcHHHHHHHHHHhCC--CC-CEEEEcCCCchhHHHHHHHCCCEEEEEecccc
Confidence 4566889999998888754 44 68999999999999999999999888887554
No 472
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=60.04 E-value=1.7e+02 Score=28.39 Aligned_cols=149 Identities=13% Similarity=0.078 Sum_probs=85.7
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEE----cC--CCC-------hhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYF----PT--PTW-------NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 303 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv----~~--P~y-------~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~ 303 (583)
.+||..+...+..++.. -+.+.+ +. .+| .-....++..|+.++.++. +.. ..-..+.+.+.
T Consensus 7 ~SGGKDS~~al~~a~~~----~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~-~~~-~e~~~e~l~~~ 80 (223)
T TIGR00290 7 ISGGKDSCLALYHALKE----HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYT-EGT-EEDEVEELKGI 80 (223)
T ss_pred ecCcHHHHHHHHHHHHh----CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeec-CCC-ccHHHHHHHHH
Confidence 78999888775444333 222221 11 122 2234567778998877665 221 11135566666
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecC
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
++.. +...++ +|.+.+..++..+-+.|.+.|+. ++.+++-.+ ...-+..+.+.+-..+++..-
T Consensus 81 l~~~--gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~-----~~~PLW~~~---~~~ll~e~i~~G~~aiIv~v~ 143 (223)
T TIGR00290 81 LHTL--DVEAVV-------FGAIYSEYQKTRIERVCRELGLK-----SFAPLWHRD---PEKLMEEFVEEKFEARIIAVA 143 (223)
T ss_pred HHHc--CCCEEE-------ECCcccHHHHHHHHHHHHhcCCE-----EeccccCCC---HHHHHHHHHHcCCeEEEEEEe
Confidence 6544 455565 89999999999999999999985 456777543 223455665554444444332
Q ss_pred cccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 384 SKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 384 SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
+. ++..--+|=-+- +++++.|....
T Consensus 144 a~--gL~~~~LGr~i~--------~e~i~~L~~~~ 168 (223)
T TIGR00290 144 AE--GLDESWLGRRID--------RKMIDELKKLN 168 (223)
T ss_pred cC--CCChHHcCCccc--------HHHHHHHHHHH
Confidence 22 233333443332 46777776543
No 473
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=59.54 E-value=19 Score=37.35 Aligned_cols=70 Identities=11% Similarity=0.126 Sum_probs=43.9
Q ss_pred hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q psy14428 271 HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPF 347 (583)
Q Consensus 271 ~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI 347 (583)
....+..++.++...-+.|...+.+......+.- .... . .....+.|..+|++++++|++.|++++|-||
T Consensus 23 ~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt---~~ga--~--~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 23 YIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLT---EIGG--S--TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHHHhCCcEEEEEeecCCcceeeecCccccc---cccc--c--cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 3455666788888888755544444333332211 0011 0 1223466789999999999999999999877
No 474
>PRK06107 aspartate aminotransferase; Provisional
Probab=59.51 E-value=14 Score=39.33 Aligned_cols=59 Identities=10% Similarity=0.080 Sum_probs=38.8
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 70 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~ 70 (583)
+|.||.+....+.. ++ .+|.+++|+|.+|..+....+..+..+..-....-.+|.+.+.
T Consensus 102 ~~~al~~~~~~~~~--~g-d~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 160 (402)
T PRK06107 102 AKQAIFLALMATLE--AG-DEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALE 160 (402)
T ss_pred HHHHHHHHHHHhcC--CC-CEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHH
Confidence 46777777654322 45 6899999999999999988887766555421222235554443
No 475
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=59.13 E-value=16 Score=38.44 Aligned_cols=57 Identities=7% Similarity=0.044 Sum_probs=40.3
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
++.+|.+....+.+ ++ .+|.+++|||..+...++..|.++...+. + ..++|++.+.+
T Consensus 90 s~e~i~~~~~~l~~--~g-d~vlv~~P~y~~~~~~~~~~g~~v~~v~~-~--~~~~d~~~l~~ 146 (366)
T PRK01533 90 LDEVIQIISRAVLK--AG-DNIVTAGATFPQYRHHAIIEGCEVKEVAL-N--NGVYDLDEISS 146 (366)
T ss_pred HHHHHHHHHHHhcC--CC-CEEEEcCCcHHHHHHHHHHcCCEEEEeec-C--CCCcCHHHHHH
Confidence 34444444444333 45 67999999999999999999999888776 2 23678776644
No 476
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=59.12 E-value=16 Score=38.42 Aligned_cols=44 Identities=20% Similarity=0.236 Sum_probs=34.4
Q ss_pred CCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 25 PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 25 ~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
++ .+|.+++|+|..+..+++..|.++..++..+ ..++|.+.+.+
T Consensus 111 ~g-d~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~ 154 (371)
T PRK05166 111 PG-DRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCA 154 (371)
T ss_pred CC-CEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHH
Confidence 44 6799999999999999999999988887642 35677766543
No 477
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=59.06 E-value=17 Score=39.18 Aligned_cols=67 Identities=15% Similarity=0.097 Sum_probs=48.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc--------CCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF--------DNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~--------~~~~~~~d~~~~~~~~~ 74 (583)
|=+-|||+|++++..-+.+ |+ ..| +++|+|..+......+|.......-- ++-+..+|.+.+-+.+.
T Consensus 72 v~t~~Gt~Al~la~~al~~--pG-D~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~ 146 (431)
T cd00617 72 IPTHQGRGAENILFSILLK--PG-RTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLID 146 (431)
T ss_pred EEcCCHHHHHHHHHHHhCC--CC-CEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhC
Confidence 5578999999998776644 66 467 89999999999999999765544331 12345577777666654
No 478
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=58.77 E-value=20 Score=37.49 Aligned_cols=119 Identities=16% Similarity=0.167 Sum_probs=75.5
Q ss_pred eeeccCCCCcccchhhhHHHHH-----hhhhhcccccchhhhHHHHHHHhCCCCcEEEeCCCCCCChHhHhhhcCCcccc
Q psy14428 53 AYRYFDNKTNGLDFAGMMEDIK-----LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGA 127 (583)
Q Consensus 53 ~y~~~~~~~~~~d~~~~~~~~~-----~a~~q~~~gtgal~~~~~~~~~~~~~~~~~~i~~ptw~nh~~if~~~g~~~~~ 127 (583)
..+|.|+ +...+.+.+. ..+-|.+-|-|+=.+-....+-+.+...++.++.||.+.|....+..|.++..
T Consensus 51 ~~rYPd~-----~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~ 125 (356)
T COG0079 51 LNRYPDP-----DYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVK 125 (356)
T ss_pred hccCCCC-----cHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEE
Confidence 3455555 3444444442 22346666888888877777666654368999999999999999999999988
Q ss_pred cccccCCCCCccccCccccchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHH
Q psy14428 128 YRYFDNKTNGLDFAGMMEDIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRI 193 (583)
Q Consensus 128 y~Y~~~~~~~~d~~~m~~~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~ 193 (583)
-++-+ +.+|.++|++.... +.+.+- +..|.++.|.....+.+++.+...
T Consensus 126 v~~~~---~~~d~~~~~~~~~~------------~~~lv~--i~nPNNPTG~~~~~~~l~~l~~~~ 174 (356)
T COG0079 126 VPLKE---FRLDLDAILAAIRD------------KTKLVF--LCNPNNPTGTLLPREELRALLEAL 174 (356)
T ss_pred ecccc---cccCHHHHHHhhhc------------CCCEEE--EeCCCCCCCCCCCHHHHHHHHHhC
Confidence 88744 77777777654221 111111 123334456565666776666554
No 479
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=58.74 E-value=23 Score=36.13 Aligned_cols=69 Identities=9% Similarity=0.071 Sum_probs=43.6
Q ss_pred hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q psy14428 271 HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPF 347 (583)
Q Consensus 271 ~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI 347 (583)
+...+..++.++...-+.|.+.+.+......+.-+. ... .++ .+.|..+|++++++|++.|+++||-||
T Consensus 21 ~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~-g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 21 TIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEK-GGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhh-ccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 345566678888888886554444443333222111 100 111 245679999999999999999999777
No 480
>PRK06855 aminotransferase; Validated
Probab=58.32 E-value=35 Score=36.74 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=31.0
Q ss_pred cccccchhhhHHHHHHHhCCCCcEEEeCCCCCCChHhHh-hhcCCccccccc
Q psy14428 80 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TDSRLNVGAYRY 130 (583)
Q Consensus 80 ~~~gtgal~~~~~~~~~~~~~~~~~~i~~ptw~nh~~if-~~~g~~~~~y~Y 130 (583)
|.|++.||.+...+ ..|+ ..|.|.+|+|+++.... ...|..+..++.
T Consensus 102 t~G~~~al~~~~~l---~~~G-d~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~ 149 (433)
T PRK06855 102 FNGLGDAIAKIYGL---LRRE-ARVIGPSPAYSTHSSAEAAHAGYPPVTYRL 149 (433)
T ss_pred cCcHHHHHHHHHHh---cCCC-CeEEEeCCCCchHHHHHHHhcCCeEEEEec
Confidence 55667777666432 2344 78999999999986432 244776666664
No 481
>PLN02970 serine racemase
Probab=58.10 E-value=1.3e+02 Score=31.10 Aligned_cols=78 Identities=10% Similarity=-0.014 Sum_probs=46.1
Q ss_pred CCCCCCCHHHHHHHHHHHhC--CCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcC
Q psy14428 202 YANIGGDAKFCKLAAQLAYG--EDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSR 279 (583)
Q Consensus 202 Y~~~~G~~~Lr~aia~~~~~--~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G 279 (583)
+..+.|.-..|-+....... +.+ ...|+. .++|+.++.++. ......-.-.|++|+-+...-...++.+|
T Consensus 50 ~~nptGSfKdRga~~~i~~~~~~~~----~~~vv~--aSsGN~g~alA~--~a~~~G~~~~ivvp~~~~~~k~~~~~~~G 121 (328)
T PLN02970 50 CFQKGGAFKFRGACNAIFSLSDDQA----EKGVVT--HSSGNHAAALAL--AAKLRGIPAYIVVPKNAPACKVDAVIRYG 121 (328)
T ss_pred CCCCCCCcHHHHHHHHHHHhhHhhc----CCeEEE--ECCcHHHHHHHH--HHHHcCCCEEEEECCCCCHHHHHHHHhcC
Confidence 33344666666554433221 111 234666 788888888763 22322212466777666666677889999
Q ss_pred CeEEEEec
Q psy14428 280 LNVGAYRY 287 (583)
Q Consensus 280 ~~~~~v~~ 287 (583)
++++.++-
T Consensus 122 A~Vi~~~~ 129 (328)
T PLN02970 122 GIITWCEP 129 (328)
T ss_pred CEEEEeCC
Confidence 99988753
No 482
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=57.58 E-value=14 Score=39.06 Aligned_cols=65 Identities=17% Similarity=0.183 Sum_probs=48.2
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|||.||++++..+. +-|+ .+|.+++|||......+...|.++.... .|+.+..+|.+.+.+.+
T Consensus 52 ~~sgt~aL~~~l~al~-~~pG-d~Viv~~~t~~~~~~~~~~~G~~~v~vd-~d~~~~~~d~~~le~~i 116 (376)
T TIGR02379 52 TPSCTAALEMAALLLD-IQPG-DEVIMPSYTFVSTANAFVLRGAKIVFVD-IRPDTMNIDETLIESAI 116 (376)
T ss_pred eCCHHHHHHHHHHHcC-CCCc-CEEEECCCCcHHHHHHHHHcCCEEEEEe-cCCCcCCCCHHHHHHhc
Confidence 4589999999887651 1145 6799999999999888888898877664 46666667877655443
No 483
>PRK08638 threonine dehydratase; Validated
Probab=56.44 E-value=61 Score=33.57 Aligned_cols=52 Identities=12% Similarity=-0.059 Sum_probs=34.0
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEe
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 286 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 286 (583)
.|+. +++|+.++.++. ......-.-.|++|+-.-..-...++.+|++++.++
T Consensus 77 ~vv~--~SsGN~g~alA~--~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 77 GVVA--CSAGNHAQGVAL--SCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred eEEE--eCCcHHHHHHHH--HHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 4666 777888888763 222222124566666555666778899999998764
No 484
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=54.70 E-value=22 Score=37.21 Aligned_cols=61 Identities=15% Similarity=0.082 Sum_probs=43.1
Q ss_pred chhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 9 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 9 ~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
++.+|.+....+.+ ++ ..|.+++|+|.++..+++..|.++..++.-+ .-++|++.+.+.++
T Consensus 97 ~~~~l~~~~~~~~~--~g-d~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~ 157 (368)
T PRK03317 97 SNEILQQLLQAFGG--PG-RTALGFVPSYSMHPIIARGTHTEWVEGPRAA--DFTLDVDAAVAAIA 157 (368)
T ss_pred HHHHHHHHHHHhcC--CC-CEEEEeCCChHHHHHHHHhcCCeeEEcccCC--CCCCCHHHHHHHHh
Confidence 34455555554433 45 6799999999999999999998877765422 24788887766554
No 485
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=54.43 E-value=79 Score=24.13 Aligned_cols=23 Identities=17% Similarity=0.088 Sum_probs=19.0
Q ss_pred CC-HHHHHHHHHHHHhcCeEEEEe
Q psy14428 327 LS-EDQWRQLAVVVKQRHLYPFFD 349 (583)
Q Consensus 327 ~s-~~~~~~l~~~a~~~~i~iI~D 349 (583)
++ ++++++|.+|+++-|-+||.|
T Consensus 47 ~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 47 LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CCchHHHHHHHHHHHcCCEEEEeC
Confidence 45 699999999999888887764
No 486
>KOG1209|consensus
Probab=53.62 E-value=70 Score=30.83 Aligned_cols=88 Identities=11% Similarity=0.143 Sum_probs=62.6
Q ss_pred CCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 229 DNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 229 ~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
+.-|+| |.+++++|-.+ +...+...|=.|+...-.-....++....|.++..+++.+++ ++..++..+...+
T Consensus 7 ~k~VlI--tgcs~GGIG~a--la~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~----~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 7 PKKVLI--TGCSSGGIGYA--LAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPE----EVVTVSGEVRANP 78 (289)
T ss_pred CCeEEE--eecCCcchhHH--HHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChH----HHHHHHHHHhhCC
Confidence 456888 99999999775 555666668888888888888888888889988888774332 3445555555445
Q ss_pred CCcEEEEeCCCCCCCC
Q psy14428 309 ERSILFLQTSSHNPTG 324 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG 324 (583)
.+..=++++|..-|.-
T Consensus 79 ~Gkld~L~NNAG~~C~ 94 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCT 94 (289)
T ss_pred CCceEEEEcCCCCCcc
Confidence 5666677777766654
No 487
>PRK06290 aspartate aminotransferase; Provisional
Probab=53.16 E-value=30 Score=36.99 Aligned_cols=59 Identities=10% Similarity=0.075 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 10 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 10 tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
+.||.+....+.+ ++ .+|-+++|+|.++..+++..|.++..++.-+...-.+|++.+.+
T Consensus 116 ~~al~~~~~~~~~--~g-d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~ 174 (410)
T PRK06290 116 KPALAMLPSCFIN--PG-DVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPK 174 (410)
T ss_pred HHHHHHHHHHhCC--CC-CEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHH
Confidence 4555555544432 44 68999999999999999999999999986433233456665543
No 488
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=53.01 E-value=22 Score=37.03 Aligned_cols=47 Identities=23% Similarity=0.248 Sum_probs=35.5
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 57 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~ 57 (583)
+++.+|.+....+.+ ++ ..|.+++|+|..+....+..|.++..++..
T Consensus 90 G~~~al~~~~~~~~~--~g-d~V~v~~P~y~~~~~~~~~~g~~~~~~~l~ 136 (357)
T PRK14809 90 GGDGALDYLARAMLD--PG-DTVLVPDPGFAYYGMSARYHHGEVREYPVS 136 (357)
T ss_pred CHHHHHHHHHHHhcC--CC-CEEEEeCCChHHHHHHHHHcCCeEEEEecc
Confidence 445666666554433 55 679999999999999888899988888763
No 489
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=52.97 E-value=99 Score=31.29 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=33.6
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEec
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 287 (583)
..|+. +++|+.+..++. ......-.-.|+++.-.-..-...++.+|++++.++-
T Consensus 66 ~~iv~--~ssGN~g~alA~--~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 66 KGVVA--ASAGNHAQGVAY--AAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred CcEEE--ECCCHHHHHHHH--HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34666 777888887763 2222221234445544445567788999999988864
No 490
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=52.59 E-value=55 Score=34.81 Aligned_cols=95 Identities=9% Similarity=0.020 Sum_probs=54.8
Q ss_pred EEecCCCCcCchhhhhhcCC--C-ce---eeeeccCCCCcccchhhhHHHH-------HhhhhhcccccchhhhHHHHHH
Q psy14428 29 TVYFPTPTWNGHVRFCTDSR--L-NV---GAYRYFDNKTNGLDFAGMMEDI-------KLAIVQGISGSGSLRVGTAFLE 95 (583)
Q Consensus 29 ~~~~~~p~w~n~~~~~~~~~--~-~~---~~y~~~~~~~~~~d~~~~~~~~-------~~a~~q~~~gtgal~~~~~~~~ 95 (583)
..-+++|.+.-+..+.+... + +. .....|.+..+-.++-..+.+. ..-+-|.+-+.||-..-..++.
T Consensus 38 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~~ 117 (409)
T PRK07590 38 RLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNILD 117 (409)
T ss_pred EecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHHH
Confidence 35677888877654443221 1 11 1222333444455666666653 2334444455555443333333
Q ss_pred HhCCCCcEEEeCCCCCCChHhHhhhcCCc
Q psy14428 96 RFYPGVKTVYFPTPTWNGHVRFCTDSRLN 124 (583)
Q Consensus 96 ~~~~~~~~~~i~~ptw~nh~~if~~~g~~ 124 (583)
-+.|+ .+|.|.+|+|+++..+++..|.+
T Consensus 118 ~~~~g-d~V~v~~P~Y~~~~~~~~~~g~~ 145 (409)
T PRK07590 118 IFGPD-NTIAVTDPVYPVYVDTNVMAGRT 145 (409)
T ss_pred hcCCC-CEEEEeCCCCcchHHHHHHcCCc
Confidence 33354 78999999999999999999886
No 491
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=52.49 E-value=23 Score=37.00 Aligned_cols=51 Identities=18% Similarity=0.111 Sum_probs=35.5
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 57 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~ 57 (583)
.+-++||-..-...+.-+.++ .+|.+++|+|.++..+++..|.++..++..
T Consensus 77 I~it~G~~~~i~~~~~~l~~g-~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~ 127 (360)
T PRK07392 77 ILPGNGAAELLTWAGRELAQL-RAVYLITPAFGDYRRALRAFGATVKELPLP 127 (360)
T ss_pred EEECCCHHHHHHHHHHHhCCC-CeEEEECCCcHHHHHHHHHcCCeEEEEecc
Confidence 344555544333333223345 579999999999999999999998888753
No 492
>PRK08175 aminotransferase; Validated
Probab=51.85 E-value=22 Score=37.64 Aligned_cols=50 Identities=22% Similarity=0.185 Sum_probs=35.1
Q ss_pred ecccchhH---HHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc
Q psy14428 5 QGISGSGS---LRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 57 (583)
Q Consensus 5 q~~~~tg~---~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~ 57 (583)
|.+-++|+ |.+.+..+.+ ++ .+|.+++|+|.++...++..|.++..|+..
T Consensus 93 ~i~~t~G~~~~l~~~~~~~~~--~g-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~ 145 (395)
T PRK08175 93 EAIVTIGSKEGLAHLMLATLD--HG-DTVLVPNPSYPIHIYGAVIAGAQVRSVPLV 145 (395)
T ss_pred cEEEccCcHHHHHHHHHHhCC--CC-CEEEEcCCCCcchHHHHHHcCCeEEEEecc
Confidence 34444444 4443333322 45 689999999999999999999998888764
No 493
>PRK03321 putative aminotransferase; Provisional
Probab=51.73 E-value=22 Score=36.85 Aligned_cols=62 Identities=11% Similarity=0.068 Sum_probs=40.7
Q ss_pred cchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
-++||-.+...++.-+.++..+|.+++|+|..+..+++..|.++..++.. + +.++|.+.+.+
T Consensus 79 ~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~l~~ 140 (352)
T PRK03321 79 VGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLT-P-DHTHDLDAMAA 140 (352)
T ss_pred ECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC-C-CCCCCHHHHHH
Confidence 34555444333333333333689999999999999999999988887753 2 25677665543
No 494
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=51.63 E-value=1.4e+02 Score=30.68 Aligned_cols=54 Identities=17% Similarity=0.027 Sum_probs=32.8
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEec
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 287 (583)
..|+. .++|+.+..++. ......---.|+++.-.-..-...++.+|++++.++-
T Consensus 52 ~~vv~--aSsGN~g~alA~--~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 52 VHVVC--SSGGNAGLAAAY--AARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred CeEEE--eCCcHHHHHHHH--HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 34555 667788887763 2222221234555554455567788999999988753
No 495
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=51.57 E-value=22 Score=36.64 Aligned_cols=66 Identities=20% Similarity=0.123 Sum_probs=50.3
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
-+-|||.|+.++...+. .-++ .+|.+++|++......+...|.++..++. ++.+..+|.+.+.+.+
T Consensus 38 ~~~sgt~al~~~l~~l~-~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i 103 (352)
T cd00616 38 AVSSGTAALHLALRALG-IGPG-DEVIVPSFTFVATANAILLLGATPVFVDI-DPDTYNIDPELIEAAI 103 (352)
T ss_pred EECCHHHHHHHHHHHcC-CCCC-CEEEeCCcchHHHHHHHHHcCCeEEEEec-CCCcCCcCHHHHHHhc
Confidence 35589999999887663 1245 68999999999998888999999988876 4446677877665443
No 496
>PRK05839 hypothetical protein; Provisional
Probab=51.45 E-value=27 Score=36.68 Aligned_cols=99 Identities=12% Similarity=0.024 Sum_probs=56.0
Q ss_pred ecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH-------Hhhhhhcc---cccchhhhHHHHHHHhCCC
Q psy14428 31 YFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI-------KLAIVQGI---SGSGSLRVGTAFLERFYPG 100 (583)
Q Consensus 31 ~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~-------~~a~~q~~---~gtgal~~~~~~~~~~~~~ 100 (583)
-+++|.++....+.+...-......+|.+..+...+-..+.+. ...+-|.+ |++.||.+...++-. -+.
T Consensus 30 ~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~-~~~ 108 (374)
T PRK05839 30 TIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLF-DKQ 108 (374)
T ss_pred CCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhc-CCC
Confidence 4456777765544443221112344454444444555555331 12332333 445555554443311 122
Q ss_pred CcEEEeCCCCCCChHhHhhhcCCccccccc
Q psy14428 101 VKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 130 (583)
Q Consensus 101 ~~~~~i~~ptw~nh~~if~~~g~~~~~y~Y 130 (583)
...|.+++|+|+++...++..|.++..++.
T Consensus 109 gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~ 138 (374)
T PRK05839 109 NPTIAYPNPFYQIYEGAAIASRAKVLLMPL 138 (374)
T ss_pred CCEEEECCCCchhhHHHHHhcCCEEEEeec
Confidence 368999999999999999999999988875
No 497
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=51.06 E-value=26 Score=37.00 Aligned_cols=68 Identities=24% Similarity=0.180 Sum_probs=47.1
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhh-----hhcCCCceeeeecc-CCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF-----CTDSRLNVGAYRYF-DNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~-----~~~~~~~~~~y~~~-~~~~~~~d~~~~~~~~~ 74 (583)
|...|||.|+.++..-|.+ ++ .+|.+++|+++.|... .+..|.++..+++- ++.+..+|++.+.+.++
T Consensus 85 v~~~sgt~a~~~~l~~l~~--~G-d~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~ 158 (402)
T cd00378 85 VQPHSGSQANLAVYFALLE--PG-DTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMAL 158 (402)
T ss_pred eecCCcHHHHHHHHHHhcC--CC-CEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHH
Confidence 4555899999887776644 56 6799999999877554 45567666655542 33367889987766553
No 498
>PRK07476 eutB threonine dehydratase; Provisional
Probab=50.99 E-value=90 Score=32.10 Aligned_cols=51 Identities=10% Similarity=-0.037 Sum_probs=33.9
Q ss_pred eEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEe
Q psy14428 232 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 286 (583)
Q Consensus 232 I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 286 (583)
|+. .++|+.+..++. ......-.-.|++|...-..-...++.+|++++.++
T Consensus 70 vv~--aSsGN~g~alA~--~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~ 120 (322)
T PRK07476 70 VVT--ASTGNHGRALAY--AARALGIRATICMSRLVPANKVDAIRALGAEVRIVG 120 (322)
T ss_pred EEE--ECCChHHHHHHH--HHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEEC
Confidence 666 788888888763 222222123556666555666778899999998775
No 499
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=50.97 E-value=30 Score=35.91 Aligned_cols=63 Identities=13% Similarity=0.001 Sum_probs=42.4
Q ss_pred cchhHHHHHHHHHHhhcCCC--eEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 8 SGSGSLRVGTAFLERFYPGV--KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 8 ~~tg~~~~~~~~~~~~~~~~--~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
+++.|+.+....+.+ ++. .+|-+++|+|.++...++..|.++..|+.-....-.+|.+.+.+.
T Consensus 68 Gs~~ai~~~~~~~~~--~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 132 (350)
T TIGR03537 68 GSKEAIFHFPLVFID--PEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKS 132 (350)
T ss_pred ChHHHHHHHHHHHcC--CCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHh
Confidence 345566665554433 331 479999999999999999999999999864222223566655443
No 500
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=50.09 E-value=2.5e+02 Score=27.25 Aligned_cols=49 Identities=12% Similarity=0.009 Sum_probs=29.8
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEec
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~ 287 (583)
.++|+.+..++. ..+.+.- .-.|++|.-.-..-...++..|++++.++-
T Consensus 56 ~ssGN~g~alA~-~a~~~g~-~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 56 STGGNTGIALAA-AAARLGL-KCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred eCCcHHHHHHHH-HHHHcCC-CEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 555677777653 2222211 234555555555666778889999988754
Done!