Query psy14428
Match_columns 583
No_of_seqs 479 out of 2884
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 19:35:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k7y_A Aspartate aminotransfer 100.0 1.3E-51 4.4E-56 437.6 39.7 370 146-582 12-389 (405)
2 4h51_A Aspartate aminotransfer 100.0 1E-52 3.5E-57 446.6 30.7 373 145-582 27-401 (420)
3 7aat_A Aspartate aminotransfer 100.0 1.5E-46 5.2E-51 398.4 35.0 378 146-583 11-388 (401)
4 4f4e_A Aromatic-amino-acid ami 100.0 5.5E-45 1.9E-49 389.3 37.3 374 146-583 32-407 (420)
5 3meb_A Aspartate aminotransfer 100.0 1.1E-44 3.8E-49 390.3 36.3 378 146-583 32-429 (448)
6 4eu1_A Mitochondrial aspartate 100.0 4E-44 1.4E-48 381.1 31.0 371 146-583 24-396 (409)
7 3fsl_A Aromatic-amino-acid ami 100.0 1.9E-42 6.3E-47 366.1 37.0 343 146-538 9-358 (397)
8 1yaa_A Aspartate aminotransfer 100.0 7E-41 2.4E-45 356.3 34.9 348 147-537 13-368 (412)
9 2q7w_A Aspartate aminotransfer 100.0 2.7E-40 9.3E-45 349.4 35.7 346 147-536 10-355 (396)
10 1ajs_A Aspartate aminotransfer 100.0 4.3E-40 1.5E-44 350.0 33.4 346 147-535 14-366 (412)
11 2ay1_A Aroat, aromatic amino a 100.0 3E-39 1E-43 341.3 34.6 344 147-537 10-353 (394)
12 1b5p_A Protein (aspartate amin 100.0 6.1E-40 2.1E-44 346.0 28.6 298 162-535 30-328 (385)
13 3aow_A Putative uncharacterize 100.0 3.3E-39 1.1E-43 347.6 25.6 305 162-536 75-385 (448)
14 3b46_A Aminotransferase BNA3; 100.0 3.5E-38 1.2E-42 339.5 26.8 303 161-536 55-369 (447)
15 3dyd_A Tyrosine aminotransfera 100.0 6.6E-38 2.3E-42 335.3 27.9 324 147-536 36-363 (427)
16 3tcm_A Alanine aminotransferas 100.0 6.5E-37 2.2E-41 334.1 34.9 315 161-534 93-421 (500)
17 3t18_A Aminotransferase class 100.0 1.6E-38 5.6E-43 338.1 21.6 327 147-534 17-363 (413)
18 2r2n_A Kynurenine/alpha-aminoa 100.0 1.1E-38 3.7E-43 341.2 19.8 306 163-536 31-362 (425)
19 3rq1_A Aminotransferase class 100.0 8E-38 2.7E-42 333.3 25.5 330 146-535 17-366 (418)
20 3ihj_A Alanine aminotransferas 100.0 1.3E-36 4.4E-41 331.4 30.6 284 199-534 122-420 (498)
21 1gd9_A Aspartate aminotransfer 100.0 1.7E-36 5.7E-41 319.7 30.4 300 163-536 26-327 (389)
22 3jtx_A Aminotransferase; NP_28 100.0 7.7E-36 2.6E-40 315.2 33.1 299 160-536 27-335 (396)
23 3e2y_A Kynurenine-oxoglutarate 100.0 3.5E-37 1.2E-41 327.1 22.6 308 161-535 21-338 (410)
24 2x5f_A Aspartate_tyrosine_phen 100.0 1.3E-36 4.3E-41 325.4 25.2 309 163-535 47-376 (430)
25 2o1b_A Aminotransferase, class 100.0 1.5E-36 5.2E-41 322.3 24.5 298 162-535 46-344 (404)
26 3ezs_A Aminotransferase ASPB; 100.0 4.1E-36 1.4E-40 315.1 27.2 307 143-479 2-317 (376)
27 3fvs_A Kynurenine--oxoglutarat 100.0 1.1E-36 3.9E-41 324.5 22.1 307 162-536 27-346 (422)
28 1vp4_A Aminotransferase, putat 100.0 2.3E-36 7.9E-41 323.0 24.1 307 161-536 41-358 (425)
29 1u08_A Hypothetical aminotrans 100.0 5.2E-36 1.8E-40 315.8 25.7 298 163-536 30-328 (386)
30 2dou_A Probable N-succinyldiam 100.0 2.1E-36 7.1E-41 317.6 22.5 298 161-536 23-321 (376)
31 3h14_A Aminotransferase, class 100.0 3.9E-36 1.3E-40 317.2 24.6 293 161-536 29-322 (391)
32 3ele_A Amino transferase; RER0 100.0 8E-36 2.7E-40 315.5 27.0 295 162-480 34-342 (398)
33 3ppl_A Aspartate aminotransfer 100.0 2E-36 6.8E-41 323.6 22.4 304 161-537 31-360 (427)
34 3g0t_A Putative aminotransfera 100.0 1.9E-36 6.5E-41 324.3 20.9 305 161-535 42-379 (437)
35 2x5d_A Probable aminotransfera 100.0 5.7E-36 2E-40 318.4 24.3 300 161-535 35-336 (412)
36 3d6k_A Putative aminotransfera 100.0 4.3E-36 1.5E-40 320.7 22.5 300 164-536 33-357 (422)
37 3nra_A Aspartate aminotransfer 100.0 1.1E-35 3.6E-40 315.2 24.4 300 164-536 40-346 (407)
38 1j32_A Aspartate aminotransfer 100.0 4.8E-35 1.6E-39 308.4 28.2 300 161-535 28-329 (388)
39 1iay_A ACC synthase 2, 1-amino 100.0 1.1E-34 3.7E-39 310.1 31.1 302 164-536 37-362 (428)
40 1o4s_A Aspartate aminotransfer 100.0 6.6E-35 2.3E-39 307.9 29.0 254 161-439 39-293 (389)
41 3qgu_A LL-diaminopimelate amin 100.0 2.6E-35 8.9E-40 316.9 24.2 294 161-535 67-382 (449)
42 1yiz_A Kynurenine aminotransfe 100.0 2.8E-35 9.7E-40 314.7 24.0 306 163-536 37-354 (429)
43 2zc0_A Alanine glyoxylate tran 100.0 1.7E-34 5.7E-39 306.3 28.7 303 164-536 35-343 (407)
44 1xi9_A Putative transaminase; 100.0 9.3E-35 3.2E-39 308.5 26.7 302 161-535 36-342 (406)
45 3piu_A 1-aminocyclopropane-1-c 100.0 4E-34 1.4E-38 306.5 31.2 303 164-536 39-367 (435)
46 2o0r_A RV0858C (N-succinyldiam 100.0 4.4E-35 1.5E-39 311.5 23.4 299 162-536 24-325 (411)
47 2z61_A Probable aspartate amin 100.0 2.9E-34 1E-38 300.6 28.2 287 162-536 28-315 (370)
48 3fdb_A Beta C-S lyase, putativ 100.0 8E-35 2.7E-39 305.2 23.4 297 161-536 21-318 (377)
49 1bw0_A TAT, protein (tyrosine 100.0 2.4E-34 8.3E-39 306.1 27.3 310 163-536 33-352 (416)
50 3g7q_A Valine-pyruvate aminotr 100.0 1.7E-35 5.7E-40 314.9 18.2 302 161-536 29-348 (417)
51 2zyj_A Alpha-aminodipate amino 100.0 1.2E-34 4.2E-39 306.6 24.3 297 162-536 31-333 (397)
52 3ez1_A Aminotransferase MOCR f 100.0 6.4E-35 2.2E-39 311.4 21.8 304 162-536 24-354 (423)
53 3kax_A Aminotransferase, class 100.0 2.2E-34 7.4E-39 302.4 24.1 301 161-536 22-326 (383)
54 1c7n_A Cystalysin; transferase 100.0 8.5E-34 2.9E-38 300.0 26.7 301 163-536 31-334 (399)
55 4dq6_A Putative pyridoxal phos 100.0 6.4E-34 2.2E-38 299.6 24.1 299 162-536 31-334 (391)
56 3ei9_A LL-diaminopimelate amin 100.0 1E-33 3.4E-38 303.0 25.9 293 161-535 54-370 (432)
57 3dzz_A Putative pyridoxal 5'-p 100.0 1.1E-33 3.7E-38 297.9 25.1 301 162-536 26-330 (391)
58 3ly1_A Putative histidinol-pho 100.0 6.4E-33 2.2E-37 288.3 30.0 288 160-536 13-301 (354)
59 1v2d_A Glutamine aminotransfer 100.0 1.4E-33 4.8E-38 296.6 25.1 290 163-536 25-316 (381)
60 3if2_A Aminotransferase; YP_26 100.0 2.1E-34 7E-39 309.4 18.0 307 161-536 29-374 (444)
61 1d2f_A MALY protein; aminotran 100.0 1.9E-33 6.5E-38 296.5 24.5 298 163-536 28-330 (390)
62 3f6t_A Aspartate aminotransfer 100.0 1.7E-34 5.9E-39 317.2 17.2 302 164-535 104-450 (533)
63 3get_A Histidinol-phosphate am 100.0 4.2E-33 1.4E-37 291.1 26.1 284 163-536 30-315 (365)
64 2gb3_A Aspartate aminotransfer 100.0 6.2E-33 2.1E-37 294.8 27.3 294 161-535 41-336 (409)
65 1fg7_A Histidinol phosphate am 100.0 2.9E-32 9.8E-37 284.4 26.4 275 164-535 30-305 (356)
66 3asa_A LL-diaminopimelate amin 100.0 9.7E-33 3.3E-37 292.4 22.7 289 161-535 31-334 (400)
67 3l8a_A METC, putative aminotra 100.0 8.4E-33 2.9E-37 295.0 22.3 301 162-536 60-363 (421)
68 3euc_A Histidinol-phosphate am 100.0 6.8E-32 2.3E-36 282.2 27.1 286 160-535 27-314 (367)
69 3ffh_A Histidinol-phosphate am 100.0 6.2E-32 2.1E-36 282.0 26.4 282 161-480 30-314 (363)
70 2zy4_A L-aspartate beta-decarb 100.0 2E-32 6.9E-37 301.0 22.5 350 165-552 106-520 (546)
71 3bwn_A AT1G70560, L-tryptophan 100.0 1.1E-33 3.8E-38 299.1 11.7 289 161-536 20-334 (391)
72 3op7_A Aminotransferase class 100.0 7.6E-32 2.6E-36 282.6 24.7 259 199-535 56-314 (375)
73 3b1d_A Betac-S lyase; HET: PLP 100.0 8.8E-35 3E-39 307.2 0.0 301 163-536 31-334 (392)
74 3fkd_A L-threonine-O-3-phospha 100.0 3.4E-31 1.1E-35 275.2 22.8 270 162-480 14-286 (350)
75 3ftb_A Histidinol-phosphate am 100.0 1.2E-30 4.1E-35 271.7 24.9 238 161-439 24-261 (361)
76 1lc5_A COBD, L-threonine-O-3-p 100.0 2.7E-30 9.1E-35 270.0 27.0 237 163-439 24-262 (364)
77 3cq5_A Histidinol-phosphate am 100.0 1.3E-30 4.5E-35 272.9 23.8 242 165-439 32-276 (369)
78 1uu1_A Histidinol-phosphate am 100.0 1.4E-30 4.9E-35 269.0 23.6 268 163-478 19-288 (335)
79 3p1t_A Putative histidinol-pho 100.0 2E-29 6.9E-34 259.9 31.0 230 161-439 14-243 (337)
80 3hdo_A Histidinol-phosphate am 100.0 1.7E-29 5.7E-34 263.5 28.9 273 162-479 25-301 (360)
81 2hox_A ALLIIN lyase 1; cystein 100.0 6.5E-32 2.2E-36 288.8 10.1 290 163-536 56-370 (427)
82 3a2b_A Serine palmitoyltransfe 100.0 2.7E-27 9.3E-32 250.1 24.2 285 162-536 42-332 (398)
83 1e5e_A MGL, methionine gamma-l 99.9 5.3E-25 1.8E-29 233.5 29.8 229 165-439 20-259 (404)
84 3tqx_A 2-amino-3-ketobutyrate 99.9 3.6E-24 1.2E-28 225.6 26.0 280 162-480 42-336 (399)
85 1bs0_A Protein (8-amino-7-oxon 99.9 1.7E-23 5.7E-28 219.8 29.1 277 162-479 38-326 (384)
86 1sff_A 4-aminobutyrate aminotr 99.9 1E-24 3.4E-29 232.4 19.1 291 162-479 40-360 (426)
87 1t3i_A Probable cysteine desul 99.9 8.7E-24 3E-28 224.1 23.7 211 164-417 28-254 (420)
88 2dr1_A PH1308 protein, 386AA l 99.9 2.5E-23 8.4E-28 218.1 24.7 198 182-415 31-230 (386)
89 2eh6_A Acoat, acetylornithine 99.9 2.6E-24 8.8E-29 225.1 15.7 281 161-480 26-327 (375)
90 1vjo_A Alanine--glyoxylate ami 99.9 1.9E-23 6.4E-28 220.0 21.7 197 182-416 45-244 (393)
91 2ord_A Acoat, acetylornithine 99.9 7.1E-24 2.4E-28 223.8 17.3 238 162-438 39-296 (397)
92 1kmj_A Selenocysteine lyase; p 99.9 2.9E-23 9.9E-28 219.0 21.9 211 164-417 23-249 (406)
93 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.6E-23 5.4E-28 218.5 19.6 206 162-403 6-224 (371)
94 1fc4_A 2-amino-3-ketobutyrate 99.9 6.7E-23 2.3E-27 216.5 24.5 278 161-479 43-336 (401)
95 1jg8_A L-ALLO-threonine aldola 99.9 1.5E-23 5.2E-28 216.8 18.9 272 164-479 4-291 (347)
96 4adb_A Succinylornithine trans 99.9 2.9E-23 9.9E-28 219.5 19.6 282 161-480 37-345 (406)
97 2rfv_A Methionine gamma-lyase; 99.9 3.3E-22 1.1E-26 211.4 27.3 230 165-439 22-260 (398)
98 1eg5_A Aminotransferase; PLP-d 99.9 4.9E-23 1.7E-27 215.5 17.5 190 182-399 13-215 (384)
99 1elu_A L-cysteine/L-cystine C- 99.9 9E-23 3.1E-27 214.1 19.1 210 164-415 16-242 (390)
100 1svv_A Threonine aldolase; str 99.9 2.7E-23 9.2E-28 215.4 14.8 223 161-417 11-239 (359)
101 3ruy_A Ornithine aminotransfer 99.9 2E-22 6.9E-27 212.2 20.1 280 162-478 35-341 (392)
102 2ez2_A Beta-tyrosinase, tyrosi 99.9 1.3E-21 4.6E-26 210.3 25.8 226 161-418 31-282 (456)
103 2bwn_A 5-aminolevulinate synth 99.9 4.1E-21 1.4E-25 202.8 29.1 263 183-479 62-338 (401)
104 3i4j_A Aminotransferase, class 99.9 2.1E-22 7.2E-27 215.0 18.6 296 161-479 27-358 (430)
105 2w8t_A SPT, serine palmitoyltr 99.9 1.9E-21 6.4E-26 207.6 25.3 237 162-438 63-309 (427)
106 1b9h_A AHBA synthase, protein 99.9 1.4E-21 4.7E-26 205.5 23.4 186 182-403 15-202 (388)
107 2aeu_A Hypothetical protein MJ 99.9 7.2E-22 2.5E-26 207.2 20.9 221 164-439 29-253 (374)
108 2eo5_A 419AA long hypothetical 99.9 5.8E-22 2E-26 211.0 19.9 289 162-478 41-363 (419)
109 2z9v_A Aspartate aminotransfer 99.9 2.5E-21 8.5E-26 203.5 24.1 197 182-416 20-219 (392)
110 3dxv_A Alpha-amino-epsilon-cap 99.9 5.1E-22 1.7E-26 212.6 18.7 293 162-479 42-361 (439)
111 3f9t_A TDC, L-tyrosine decarbo 99.9 4.6E-22 1.6E-26 208.7 17.2 275 182-478 42-345 (397)
112 1iug_A Putative aspartate amin 99.9 8.2E-22 2.8E-26 203.8 18.8 182 182-399 12-198 (352)
113 1vef_A Acetylornithine/acetyl- 99.9 9.8E-22 3.3E-26 207.2 19.4 288 162-480 44-345 (395)
114 3kki_A CAI-1 autoinducer synth 99.9 9.5E-21 3.2E-25 200.7 26.5 236 162-438 58-301 (409)
115 2pb2_A Acetylornithine/succiny 99.9 1.5E-21 5E-26 208.0 20.3 283 161-479 55-362 (420)
116 3lvm_A Cysteine desulfurase; s 99.9 2.9E-21 1E-25 205.2 22.5 204 162-399 20-237 (423)
117 2ch1_A 3-hydroxykynurenine tra 99.9 2.3E-21 7.8E-26 204.1 21.3 195 182-416 29-228 (396)
118 1ibj_A CBL, cystathionine beta 99.9 1.5E-21 5.1E-26 210.3 20.0 200 199-440 124-328 (464)
119 2huf_A Alanine glyoxylate amin 99.9 3.8E-21 1.3E-25 202.2 22.5 208 162-417 17-230 (393)
120 3zrp_A Serine-pyruvate aminotr 99.9 2.6E-21 9.1E-26 202.3 20.5 196 182-414 13-210 (384)
121 1m32_A 2-aminoethylphosphonate 99.9 2.8E-21 9.7E-26 200.6 19.4 207 165-415 5-215 (366)
122 3cai_A Possible aminotransfera 99.9 7.2E-21 2.5E-25 201.1 22.6 211 165-416 27-249 (406)
123 1s0a_A Adenosylmethionine-8-am 99.9 4E-21 1.4E-25 205.0 20.7 291 162-479 42-371 (429)
124 3nx3_A Acoat, acetylornithine 99.9 3.8E-21 1.3E-25 202.7 20.2 284 161-480 34-342 (395)
125 4ffc_A 4-aminobutyrate aminotr 99.9 3.9E-21 1.3E-25 206.8 19.7 296 161-479 62-386 (453)
126 2yrr_A Aminotransferase, class 99.9 4.8E-21 1.6E-25 197.8 18.5 194 182-415 11-208 (353)
127 4eb5_A Probable cysteine desul 99.9 1.1E-20 3.6E-25 197.7 21.3 189 182-399 12-211 (382)
128 2oga_A Transaminase; PLP-depen 99.9 9.3E-21 3.2E-25 200.3 20.7 262 163-476 30-311 (399)
129 4a6r_A Omega transaminase; tra 99.9 1.9E-20 6.5E-25 201.8 23.1 298 161-480 48-386 (459)
130 1zod_A DGD, 2,2-dialkylglycine 99.9 6.4E-21 2.2E-25 203.6 19.2 292 162-479 42-366 (433)
131 2cy8_A D-phgat, D-phenylglycin 99.9 1.6E-20 5.3E-25 202.0 21.2 283 162-480 56-367 (453)
132 3a9z_A Selenocysteine lyase; P 99.9 1.3E-20 4.4E-25 201.0 20.1 202 164-403 18-260 (432)
133 3gju_A Putative aminotransfera 99.9 3.1E-20 1.1E-24 200.1 23.1 298 161-480 49-391 (460)
134 2bkw_A Alanine-glyoxylate amin 99.9 2.8E-20 9.7E-25 194.7 21.9 197 182-414 16-223 (385)
135 2po3_A 4-dehydrase; external a 99.8 2.2E-20 7.6E-25 199.0 20.6 205 167-419 20-226 (424)
136 1v72_A Aldolase; PLP-dependent 99.8 4.5E-21 1.6E-25 198.5 14.5 279 161-478 5-301 (356)
137 3cog_A Cystathionine gamma-lya 99.8 3.7E-20 1.3E-24 196.1 21.5 192 204-439 65-262 (403)
138 3isl_A Purine catabolism prote 99.8 5.6E-20 1.9E-24 194.6 22.8 175 207-417 45-222 (416)
139 3l44_A Glutamate-1-semialdehyd 99.8 4.3E-20 1.5E-24 197.3 21.7 283 161-479 53-365 (434)
140 1ax4_A Tryptophanase; tryptoph 99.8 5.3E-20 1.8E-24 198.4 22.0 208 184-417 55-291 (467)
141 1cs1_A CGS, protein (cystathio 99.8 1.3E-19 4.4E-24 190.7 24.4 193 204-439 50-247 (386)
142 3acz_A Methionine gamma-lyase; 99.8 1.6E-19 5.3E-24 190.4 25.0 192 205-439 58-254 (389)
143 3nnk_A Ureidoglycine-glyoxylat 99.8 5.3E-20 1.8E-24 194.5 21.3 196 182-417 24-224 (411)
144 3lws_A Aromatic amino acid bet 99.8 1.5E-20 5.1E-25 195.2 16.8 244 199-481 40-297 (357)
145 1mdo_A ARNB aminotransferase; 99.8 2.7E-19 9.3E-24 188.1 26.6 193 183-418 19-213 (393)
146 2dkj_A Serine hydroxymethyltra 99.8 2.4E-20 8.3E-25 197.0 18.1 280 163-536 23-320 (407)
147 3fq8_A Glutamate-1-semialdehyd 99.8 1.1E-19 3.8E-24 193.7 23.2 284 161-480 50-363 (427)
148 3qhx_A Cystathionine gamma-syn 99.8 2.4E-19 8.2E-24 189.1 25.4 193 204-439 64-261 (392)
149 3kgw_A Alanine-glyoxylate amin 99.8 5E-20 1.7E-24 193.2 19.8 197 182-417 34-234 (393)
150 3ndn_A O-succinylhomoserine su 99.8 1.3E-19 4.4E-24 192.5 22.2 188 207-438 82-275 (414)
151 3f0h_A Aminotransferase; RER07 99.8 1.1E-19 3.8E-24 189.8 21.3 197 182-416 30-229 (376)
152 3a8u_X Omega-amino acid--pyruv 99.8 1.8E-19 6.1E-24 193.4 23.1 291 162-480 49-390 (449)
153 3oks_A 4-aminobutyrate transam 99.8 5.1E-20 1.7E-24 198.0 18.7 296 161-479 59-388 (451)
154 1gc0_A Methionine gamma-lyase; 99.8 2.8E-19 9.6E-24 188.9 23.7 227 168-439 26-261 (398)
155 4hvk_A Probable cysteine desul 99.8 5.4E-20 1.8E-24 191.9 17.9 186 182-399 12-211 (382)
156 3mad_A Sphingosine-1-phosphate 99.8 5E-20 1.7E-24 201.3 18.4 255 184-462 114-395 (514)
157 3n5m_A Adenosylmethionine-8-am 99.8 8.3E-20 2.8E-24 196.3 19.8 293 161-479 47-383 (452)
158 1pff_A Methionine gamma-lyase; 99.8 1.3E-19 4.3E-24 186.3 20.3 185 210-438 2-194 (331)
159 1n8p_A Cystathionine gamma-lya 99.8 8.9E-20 3E-24 192.5 19.1 191 204-439 53-252 (393)
160 3k28_A Glutamate-1-semialdehyd 99.8 1.4E-19 4.7E-24 193.2 20.8 287 161-479 51-362 (429)
161 3dod_A Adenosylmethionine-8-am 99.8 4.2E-20 1.5E-24 198.4 16.8 295 161-480 42-380 (448)
162 3mc6_A Sphingosine-1-phosphate 99.8 6.8E-20 2.3E-24 199.4 18.6 259 184-462 78-363 (497)
163 3i5t_A Aminotransferase; pyrid 99.8 4.3E-19 1.5E-23 192.0 24.6 299 161-481 52-392 (476)
164 3dr4_A Putative perosamine syn 99.8 2.7E-19 9.3E-24 188.3 20.6 207 163-418 22-231 (391)
165 3tfu_A Adenosylmethionine-8-am 99.8 1.6E-19 5.4E-24 194.4 18.3 288 164-480 76-401 (457)
166 1o69_A Aminotransferase; struc 99.8 5.6E-19 1.9E-23 186.3 22.1 196 182-418 10-209 (394)
167 2c81_A Glutamine-2-deoxy-scyll 99.8 1E-18 3.5E-23 185.7 24.3 196 182-418 14-217 (418)
168 2epj_A Glutamate-1-semialdehyd 99.8 8.7E-19 3E-23 187.2 23.8 283 162-480 55-367 (434)
169 2e7u_A Glutamate-1-semialdehyd 99.8 7.1E-19 2.4E-23 187.3 22.9 281 162-480 51-363 (424)
170 3vax_A Putative uncharacterize 99.8 9.5E-20 3.2E-24 191.9 15.7 186 182-399 32-233 (400)
171 1z7d_A Ornithine aminotransfer 99.8 3.5E-19 1.2E-23 190.5 20.2 281 162-480 64-375 (433)
172 2oat_A Ornithine aminotransfer 99.8 9.1E-19 3.1E-23 187.5 23.1 283 161-480 74-384 (439)
173 3uwc_A Nucleotide-sugar aminot 99.8 3.2E-19 1.1E-23 186.3 19.0 203 164-418 7-213 (374)
174 3pj0_A LMO0305 protein; struct 99.8 3.4E-19 1.2E-23 185.0 18.0 203 183-422 28-236 (359)
175 4e77_A Glutamate-1-semialdehyd 99.8 1.6E-18 5.4E-23 184.9 23.1 283 161-480 51-364 (429)
176 3ffr_A Phosphoserine aminotran 99.8 5.7E-19 2E-23 183.0 18.4 241 182-461 15-283 (362)
177 3hmu_A Aminotransferase, class 99.8 1.9E-18 6.6E-23 186.7 23.0 299 161-481 53-389 (472)
178 3nyt_A Aminotransferase WBPE; 99.8 1.2E-18 4E-23 181.9 20.0 193 183-418 15-211 (367)
179 3ht4_A Aluminum resistance pro 99.8 2.9E-18 1E-22 182.7 22.0 181 208-420 67-262 (431)
180 2cb1_A O-acetyl homoserine sul 99.8 9.8E-18 3.3E-22 178.0 25.9 164 199-399 47-216 (412)
181 1w23_A Phosphoserine aminotran 99.8 1.4E-19 4.9E-24 187.8 11.3 189 182-415 14-217 (360)
182 2fnu_A Aminotransferase; prote 99.8 1.4E-17 4.7E-22 173.7 26.2 193 182-418 11-208 (375)
183 1qgn_A Protein (cystathionine 99.8 5.8E-18 2E-22 181.0 23.2 189 206-438 114-308 (445)
184 3n0l_A Serine hydroxymethyltra 99.8 1.5E-18 5.1E-23 183.8 18.5 207 182-421 37-255 (417)
185 3jzl_A Putative cystathionine 99.8 5.8E-18 2E-22 179.0 22.8 183 200-419 54-255 (409)
186 2cjg_A L-lysine-epsilon aminot 99.8 1.2E-18 4.1E-23 187.2 16.9 286 163-478 54-393 (449)
187 1qz9_A Kynureninase; kynurenin 99.8 2.2E-17 7.5E-22 174.9 24.3 196 163-399 27-241 (416)
188 2fq6_A Cystathionine beta-lyas 99.8 1.5E-17 5.1E-22 176.5 22.2 189 205-437 81-276 (415)
189 1wyu_B Glycine dehydrogenase s 99.8 2.7E-18 9.2E-23 185.7 16.5 205 205-438 102-335 (474)
190 3frk_A QDTB; aminotransferase, 99.8 3.9E-18 1.3E-22 178.2 17.1 193 183-418 16-212 (373)
191 3i16_A Aluminum resistance pro 99.8 1E-17 3.5E-22 177.8 20.2 182 205-419 72-272 (427)
192 3hvy_A Cystathionine beta-lyas 99.8 2.5E-17 8.7E-22 174.8 23.3 183 200-418 69-271 (427)
193 3ri6_A O-acetylhomoserine sulf 99.8 6.3E-17 2.2E-21 172.4 23.8 159 204-399 80-242 (430)
194 3ecd_A Serine hydroxymethyltra 99.8 9.3E-18 3.2E-22 178.0 17.2 155 237-418 100-260 (425)
195 2c0r_A PSAT, phosphoserine ami 99.8 1.6E-18 5.4E-23 180.4 10.9 180 182-399 15-209 (362)
196 3nmy_A Xometc, cystathionine g 99.8 3.6E-17 1.2E-21 172.8 21.4 192 205-439 66-263 (400)
197 2oqx_A Tryptophanase; lyase, p 99.7 2E-17 6.8E-22 178.2 17.6 214 162-399 31-278 (467)
198 3h7f_A Serine hydroxymethyltra 99.7 8.6E-18 2.9E-22 180.4 13.1 264 182-478 57-344 (447)
199 1rv3_A Serine hydroxymethyltra 99.7 2.8E-17 9.4E-22 178.1 16.1 206 163-399 44-268 (483)
200 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 2.7E-16 9.2E-21 168.1 23.2 183 183-403 42-234 (437)
201 3e9k_A Kynureninase; kynurenin 99.7 5.3E-17 1.8E-21 174.9 17.7 164 209-399 114-290 (465)
202 3gbx_A Serine hydroxymethyltra 99.7 8.6E-17 2.9E-21 170.3 17.9 205 182-417 42-258 (420)
203 2vi8_A Serine hydroxymethyltra 99.7 1.2E-16 4.2E-21 168.4 18.2 265 183-536 36-319 (405)
204 3ju7_A Putative PLP-dependent 99.7 3.9E-16 1.3E-20 163.7 21.7 217 182-437 14-247 (377)
205 2dgk_A GAD-beta, GADB, glutama 99.7 5.2E-17 1.8E-21 174.5 14.8 257 182-461 54-344 (452)
206 3b8x_A WBDK, pyridoxamine 5-ph 99.7 1.4E-15 4.8E-20 159.8 22.4 192 180-417 11-214 (390)
207 2fyf_A PSAT, phosphoserine ami 99.7 6.2E-16 2.1E-20 163.0 19.2 202 163-417 39-246 (398)
208 2ctz_A O-acetyl-L-homoserine s 99.7 4.6E-16 1.6E-20 165.6 17.8 182 182-399 32-220 (421)
209 2z67_A O-phosphoseryl-tRNA(SEC 99.7 7.6E-16 2.6E-20 165.6 15.8 223 210-457 137-363 (456)
210 1js3_A DDC;, DOPA decarboxylas 99.7 5.2E-16 1.8E-20 168.2 14.3 261 182-461 86-393 (486)
211 3vp6_A Glutamate decarboxylase 99.6 5.1E-15 1.8E-19 161.3 20.0 206 184-404 110-332 (511)
212 2yky_A Beta-transaminase; tran 99.4 2.3E-17 7.8E-22 176.9 0.0 283 161-480 98-398 (465)
213 2x3l_A ORN/Lys/Arg decarboxyla 99.6 7.3E-16 2.5E-20 165.2 9.0 167 202-399 53-224 (446)
214 3hbx_A GAD 1, glutamate decarb 99.6 2.7E-15 9.3E-20 163.2 13.6 278 181-480 67-382 (502)
215 2okj_A Glutamate decarboxylase 99.6 7.1E-15 2.4E-19 160.1 16.6 255 187-461 110-403 (504)
216 2qma_A Diaminobutyrate-pyruvat 99.6 1.3E-14 4.6E-19 157.6 18.0 277 182-479 112-432 (497)
217 4h51_A Aspartate aminotransfer 99.6 1.2E-15 4.2E-20 161.5 8.9 127 18-146 16-183 (420)
218 3ke3_A Putative serine-pyruvat 99.5 2.1E-13 7.1E-18 142.8 21.0 172 210-416 39-222 (379)
219 2jis_A Cysteine sulfinic acid 99.5 1.8E-13 6.1E-18 149.4 20.0 243 199-461 137-418 (515)
220 2vyc_A Biodegradative arginine 99.5 9.7E-14 3.3E-18 157.5 16.7 174 206-399 205-399 (755)
221 2a7v_A Serine hydroxymethyltra 99.5 2.8E-13 9.7E-18 146.0 19.4 206 164-399 55-278 (490)
222 1wyu_A Glycine dehydrogenase ( 99.5 1.3E-13 4.5E-18 147.3 14.9 153 209-399 111-274 (438)
223 1ohv_A 4-aminobutyrate aminotr 99.5 1.2E-13 4.2E-18 149.0 12.8 251 161-438 61-369 (472)
224 1c4k_A Protein (ornithine deca 99.5 2E-13 6.8E-18 153.7 14.1 176 204-398 171-366 (730)
225 4e1o_A HDC, histidine decarbox 99.5 3.4E-13 1.2E-17 145.8 14.6 277 183-478 92-417 (481)
226 3k40_A Aromatic-L-amino-acid d 99.4 1.4E-12 4.9E-17 140.7 14.7 259 184-461 88-390 (475)
227 3n75_A LDC, lysine decarboxyla 99.4 3E-12 1E-16 143.0 14.6 172 204-399 193-380 (715)
228 4ao9_A Beta-phenylalanine amin 98.9 9.8E-08 3.4E-12 101.5 23.6 262 161-459 85-361 (454)
229 3hl2_A O-phosphoseryl-tRNA(SEC 98.9 2.6E-08 8.9E-13 104.1 15.3 222 216-457 123-349 (501)
230 3bc8_A O-phosphoseryl-tRNA(SEC 98.7 4.7E-07 1.6E-11 95.5 17.5 189 210-416 98-290 (450)
231 4a0g_A Adenosylmethionine-8-am 98.3 5.5E-06 1.9E-10 94.7 15.7 254 164-438 381-716 (831)
232 3e77_A Phosphoserine aminotran 98.3 3.9E-06 1.3E-10 87.1 12.9 181 182-399 24-219 (377)
233 4atq_A 4-aminobutyrate transam 98.3 6.7E-06 2.3E-10 87.6 14.6 253 161-438 62-340 (456)
234 3m5u_A Phosphoserine aminotran 98.2 2E-05 6.7E-10 81.4 16.6 187 182-416 16-216 (361)
235 3qm2_A Phosphoserine aminotran 98.2 4.5E-06 1.6E-10 87.0 10.7 158 206-399 72-234 (386)
236 4e3q_A Pyruvate transaminase; 98.2 0.00014 4.7E-09 77.8 22.1 255 161-438 65-358 (473)
237 3meb_A Aspartate aminotransfer 97.9 7.7E-06 2.6E-10 87.1 6.4 72 3-75 122-198 (448)
238 3k7y_A Aspartate aminotransfer 97.7 2.6E-05 9E-10 81.9 4.9 71 3-75 100-170 (405)
239 3ou5_A Serine hydroxymethyltra 97.6 0.00072 2.5E-08 70.5 14.0 194 182-399 66-278 (490)
240 7aat_A Aspartate aminotransfer 96.8 0.0009 3.1E-08 69.5 5.1 72 4-75 100-171 (401)
241 4f4e_A Aromatic-amino-acid ami 96.6 0.0012 4.2E-08 69.1 4.1 72 3-75 120-191 (420)
242 4eu1_A Mitochondrial aspartate 96.4 0.002 6.8E-08 67.1 4.7 72 4-75 108-179 (409)
243 3dyd_A Tyrosine aminotransfera 96.3 0.001 3.4E-08 70.0 1.8 68 4-74 122-189 (427)
244 1yaa_A Aspartate aminotransfer 95.5 0.012 4.1E-07 61.1 5.4 70 4-74 102-171 (412)
245 3tcm_A Alanine aminotransferas 93.9 0.061 2.1E-06 57.6 6.1 70 4-76 161-231 (500)
246 2ay1_A Aroat, aromatic amino a 93.4 0.049 1.7E-06 55.9 4.2 69 4-73 95-163 (394)
247 3rq1_A Aminotransferase class 93.1 0.091 3.1E-06 54.4 5.6 69 3-75 105-173 (418)
248 3fsl_A Aromatic-amino-acid ami 92.9 0.077 2.6E-06 54.4 4.7 70 4-74 99-168 (397)
249 1ajs_A Aspartate aminotransfer 92.1 0.13 4.3E-06 53.2 5.1 71 4-74 103-178 (412)
250 2q7w_A Aspartate aminotransfer 92.1 0.13 4.4E-06 52.7 5.2 69 4-73 98-166 (396)
251 3t18_A Aminotransferase class 91.0 0.19 6.4E-06 51.9 5.0 69 3-75 104-172 (413)
252 3nra_A Aspartate aminotransfer 85.1 0.63 2.2E-05 47.6 4.4 68 4-74 106-177 (407)
253 3gh5_A HEX1, beta-hexosaminida 80.9 8.9 0.00031 40.8 11.2 118 222-348 123-274 (525)
254 2x5f_A Aspartate_tyrosine_phen 80.9 1.7 5.8E-05 44.8 5.7 68 3-74 116-184 (430)
255 1jak_A Beta-N-acetylhexosamini 80.4 7.1 0.00024 41.5 10.3 117 223-348 100-249 (512)
256 3ihj_A Alanine aminotransferas 79.8 1.6 5.3E-05 46.5 5.0 69 6-76 159-230 (498)
257 2gjx_A Beta-hexosaminidase alp 79.5 4.6 0.00016 42.9 8.5 113 223-348 94-233 (507)
258 3get_A Histidinol-phosphate am 78.0 1.2 4.1E-05 44.7 3.3 63 5-72 87-149 (365)
259 3piu_A 1-aminocyclopropane-1-c 76.1 2.5 8.6E-05 43.6 5.2 70 4-76 115-185 (435)
260 3dr4_A Putative perosamine syn 75.5 1.8 6.2E-05 44.0 3.8 67 4-73 75-141 (391)
261 3f6t_A Aspartate aminotransfer 74.8 2.1 7E-05 46.0 4.2 68 4-71 168-239 (533)
262 1now_A Beta-hexosaminidase bet 74.1 7.5 0.00026 41.3 8.3 112 223-348 100-238 (507)
263 1mdo_A ARNB aminotransferase; 74.1 2.1 7.1E-05 43.4 3.9 67 4-73 58-124 (393)
264 3ly1_A Putative histidinol-pho 73.9 3.1 0.00011 41.3 5.1 64 6-74 74-137 (354)
265 3jtx_A Aminotransferase; NP_28 72.8 2.5 8.4E-05 42.9 4.1 66 6-74 97-166 (396)
266 3euc_A Histidinol-phosphate am 72.5 2.7 9.4E-05 42.0 4.3 65 6-75 91-155 (367)
267 2po3_A 4-dehydrase; external a 72.4 2.8 9.5E-05 43.2 4.4 65 4-73 71-135 (424)
268 1b5p_A Protein (aspartate amin 72.2 1.7 5.8E-05 44.1 2.7 65 4-71 95-159 (385)
269 3ele_A Amino transferase; RER0 72.1 2.9 9.8E-05 42.5 4.4 66 5-73 104-169 (398)
270 4dq6_A Putative pyridoxal phos 71.9 2.9 0.0001 42.1 4.4 66 6-74 96-163 (391)
271 3fdb_A Beta C-S lyase, putativ 71.6 2.8 9.5E-05 42.1 4.1 62 6-74 87-148 (377)
272 3qgu_A LL-diaminopimelate amin 71.4 1.3 4.5E-05 46.0 1.6 58 6-67 138-197 (449)
273 1c7s_A Beta-N-acetylhexosamini 68.9 9.9 0.00034 42.9 8.0 124 223-348 262-418 (858)
274 3h14_A Aminotransferase, class 68.7 3.2 0.00011 42.0 3.8 63 4-69 95-157 (391)
275 3ffh_A Histidinol-phosphate am 67.9 2.7 9.4E-05 42.0 3.1 63 6-73 90-152 (363)
276 4fgs_A Probable dehydrogenase 67.7 17 0.0006 35.0 8.7 101 230-339 29-134 (273)
277 3ju7_A Putative PLP-dependent 67.7 6.6 0.00023 39.8 5.9 66 4-73 57-123 (377)
278 3ez1_A Aminotransferase MOCR f 67.4 3.9 0.00013 41.9 4.2 67 5-74 92-168 (423)
279 1u08_A Hypothetical aminotrans 66.7 5.2 0.00018 40.3 4.9 66 4-73 95-160 (386)
280 3uwc_A Nucleotide-sugar aminot 66.3 2.9 9.8E-05 42.0 2.9 66 4-73 57-122 (374)
281 2e7j_A SEP-tRNA:Cys-tRNA synth 66.3 5.9 0.0002 39.4 5.2 66 6-74 75-140 (371)
282 3hvy_A Cystathionine beta-lyas 66.1 5.1 0.00017 41.6 4.7 64 5-74 97-172 (427)
283 3nyt_A Aminotransferase WBPE; 65.2 3.7 0.00013 41.2 3.4 67 4-73 54-120 (367)
284 1svv_A Threonine aldolase; str 64.9 5.7 0.0002 39.2 4.8 66 4-75 70-137 (359)
285 3n0l_A Serine hydroxymethyltra 64.5 6 0.00021 40.2 4.9 68 4-74 91-161 (417)
286 3dzz_A Putative pyridoxal 5'-p 64.2 4.3 0.00015 40.8 3.7 66 6-74 91-157 (391)
287 1o4s_A Aspartate aminotransfer 63.6 4 0.00014 41.3 3.3 64 5-71 106-169 (389)
288 3bwn_A AT1G70560, L-tryptophan 63.0 5.8 0.0002 40.3 4.5 49 4-55 95-147 (391)
289 1j32_A Aspartate aminotransfer 62.7 4.8 0.00016 40.6 3.7 65 6-73 96-160 (388)
290 2oga_A Transaminase; PLP-depen 62.6 5.8 0.0002 40.3 4.4 67 4-73 82-148 (399)
291 1b9h_A AHBA synthase, protein 62.1 5.3 0.00018 40.3 3.9 65 6-73 59-123 (388)
292 3op7_A Aminotransferase class 61.6 3.6 0.00012 41.2 2.6 66 5-73 86-151 (375)
293 2o0r_A RV0858C (N-succinyldiam 61.4 3.6 0.00012 42.0 2.5 67 4-73 90-157 (411)
294 3kax_A Aminotransferase, class 61.2 5.5 0.00019 39.9 3.9 65 6-73 88-153 (383)
295 1o69_A Aminotransferase; struc 61.0 8.6 0.0003 38.9 5.3 67 4-74 51-117 (394)
296 1iay_A ACC synthase 2, 1-amino 61.0 10 0.00034 38.8 5.9 68 4-74 112-180 (428)
297 2dou_A Probable N-succinyldiam 60.6 7.7 0.00026 38.9 4.8 64 5-73 92-155 (376)
298 3ppl_A Aspartate aminotransfer 60.4 6.4 0.00022 40.4 4.3 64 6-73 101-176 (427)
299 3cai_A Possible aminotransfera 60.3 6.6 0.00022 39.8 4.3 66 6-73 92-162 (406)
300 1c7n_A Cystalysin; transferase 60.1 7.4 0.00025 39.3 4.6 68 4-74 93-161 (399)
301 1bw0_A TAT, protein (tyrosine 59.6 4.6 0.00016 41.2 2.9 67 4-73 108-174 (416)
302 3b46_A Aminotransferase BNA3; 59.1 4.1 0.00014 42.3 2.5 51 4-57 122-172 (447)
303 1xi9_A Putative transaminase; 58.9 4.2 0.00014 41.4 2.5 67 4-73 105-171 (406)
304 2c81_A Glutamine-2-deoxy-scyll 58.9 5.5 0.00019 40.7 3.4 66 4-73 61-127 (418)
305 3cq5_A Histidinol-phosphate am 58.9 9.7 0.00033 38.0 5.2 65 5-74 97-161 (369)
306 3e2y_A Kynurenine-oxoglutarate 58.6 3.4 0.00012 42.0 1.7 64 6-72 91-163 (410)
307 2dr1_A PH1308 protein, 386AA l 58.0 8.6 0.00029 38.4 4.7 66 4-74 75-142 (386)
308 3f9t_A TDC, L-tyrosine decarbo 57.8 12 0.0004 37.4 5.7 70 4-75 90-169 (397)
309 3rcn_A Beta-N-acetylhexosamini 57.6 11 0.00038 40.3 5.5 123 223-348 80-242 (543)
310 2zc0_A Alanine glyoxylate tran 57.5 7 0.00024 39.6 3.9 64 5-74 103-166 (407)
311 3i16_A Aluminum resistance pro 56.9 12 0.0004 38.8 5.5 65 5-74 96-172 (427)
312 2o1b_A Aminotransferase, class 56.8 10 0.00036 38.5 5.1 66 4-73 113-178 (404)
313 3b8x_A WBDK, pyridoxamine 5-ph 56.5 7.4 0.00025 39.3 3.9 70 4-74 53-126 (390)
314 3fvs_A Kynurenine--oxoglutarat 55.9 4.9 0.00017 41.0 2.4 50 6-58 97-146 (422)
315 3frk_A QDTB; aminotransferase, 55.6 4.7 0.00016 40.5 2.1 67 4-73 55-121 (373)
316 3guy_A Short-chain dehydrogena 55.4 35 0.0012 31.3 8.2 96 237-339 6-103 (230)
317 2r2n_A Kynurenine/alpha-aminoa 55.2 8.9 0.0003 39.3 4.3 63 5-73 113-175 (425)
318 1rv3_A Serine hydroxymethyltra 54.0 6.6 0.00022 41.4 3.0 69 3-74 113-190 (483)
319 2x5d_A Probable aminotransfera 53.5 4.4 0.00015 41.4 1.5 51 4-57 103-153 (412)
320 1v2d_A Glutamine aminotransfer 53.5 6.4 0.00022 39.5 2.8 65 4-71 82-147 (381)
321 3g0t_A Putative aminotransfera 53.1 5.6 0.00019 40.8 2.3 67 5-73 110-178 (437)
322 1yiz_A Kynurenine aminotransfe 52.7 10 0.00035 38.8 4.2 67 4-73 105-179 (429)
323 3a2b_A Serine palmitoyltransfe 52.6 10 0.00035 38.3 4.1 50 4-56 107-156 (398)
324 1gd9_A Aspartate aminotransfer 52.2 6 0.00021 39.8 2.3 67 4-73 91-157 (389)
325 1ofu_X SULA, hypothetical prot 51.9 91 0.0031 25.8 9.2 98 237-345 10-112 (119)
326 2z61_A Probable aspartate amin 51.9 9.4 0.00032 38.1 3.7 48 5-55 94-141 (370)
327 2fnu_A Aminotransferase; prote 51.6 7.8 0.00027 38.6 3.1 66 5-73 52-118 (375)
328 3ht4_A Aluminum resistance pro 50.8 8.1 0.00028 40.1 3.1 65 5-74 88-163 (431)
329 3p1t_A Putative histidinol-pho 50.6 13 0.00045 36.3 4.5 56 7-69 75-130 (337)
330 3ezs_A Aminotransferase ASPB; 50.6 13 0.00044 37.0 4.5 52 5-59 87-140 (376)
331 2zyj_A Alpha-aminodipate amino 50.4 11 0.00037 38.1 3.9 64 5-74 96-159 (397)
332 3rwb_A TPLDH, pyridoxal 4-dehy 49.9 49 0.0017 30.8 8.3 96 237-339 11-111 (247)
333 2a7v_A Serine hydroxymethyltra 49.8 10 0.00035 40.1 3.7 70 2-74 122-200 (490)
334 3tqx_A 2-amino-3-ketobutyrate 49.4 10 0.00035 38.1 3.6 49 6-57 109-157 (399)
335 1vp4_A Aminotransferase, putat 49.2 12 0.00039 38.4 4.0 65 5-75 114-178 (425)
336 1fg7_A Histidinol phosphate am 48.6 8.8 0.0003 38.2 2.9 61 7-71 82-142 (356)
337 4g81_D Putative hexonate dehyd 47.5 91 0.0031 29.5 9.7 101 230-339 9-117 (255)
338 2ch1_A 3-hydroxykynurenine tra 47.1 16 0.00055 36.5 4.6 65 4-73 73-139 (396)
339 3aow_A Putative uncharacterize 47.1 13 0.00043 38.6 3.9 64 5-74 145-208 (448)
340 3jzl_A Putative cystathionine 47.1 15 0.00051 37.7 4.4 65 5-74 82-157 (409)
341 3qp9_A Type I polyketide synth 46.9 2.8E+02 0.0095 29.1 14.7 104 226-338 247-372 (525)
342 1pff_A Methionine gamma-lyase; 46.7 11 0.00038 36.8 3.2 50 4-56 17-70 (331)
343 1vjo_A Alanine--glyoxylate ami 46.6 17 0.00058 36.4 4.7 66 4-74 89-156 (393)
344 3rd5_A Mypaa.01249.C; ssgcid, 46.5 43 0.0015 32.1 7.5 72 237-316 21-92 (291)
345 4eb5_A Probable cysteine desul 46.5 18 0.00062 35.8 4.9 67 4-73 64-135 (382)
346 3fkd_A L-threonine-O-3-phospha 45.2 17 0.00059 35.7 4.4 50 5-59 72-121 (350)
347 3l8a_A METC, putative aminotra 45.1 10 0.00034 38.8 2.7 66 6-74 125-191 (421)
348 2dkj_A Serine hydroxymethyltra 45.0 10 0.00035 38.2 2.7 67 5-74 90-160 (407)
349 3ozo_A N-acetylglucosaminidase 44.8 56 0.0019 35.1 8.5 110 224-347 130-273 (572)
350 2gb3_A Aspartate aminotransfer 44.6 12 0.00043 37.9 3.3 94 32-130 50-155 (409)
351 3nnk_A Ureidoglycine-glyoxylat 43.8 20 0.00067 36.1 4.7 64 6-74 70-135 (411)
352 3bb8_A CDP-4-keto-6-deoxy-D-gl 43.7 13 0.00045 38.2 3.3 68 4-73 81-155 (437)
353 3d6k_A Putative aminotransfera 43.4 17 0.00058 37.1 4.1 43 28-73 132-174 (422)
354 3ged_A Short-chain dehydrogena 42.4 1.1E+02 0.0036 28.9 9.3 131 237-391 7-142 (247)
355 3lvm_A Cysteine desulfurase; s 42.3 19 0.00066 36.4 4.3 67 6-74 91-161 (423)
356 1uu1_A Histidinol-phosphate am 40.8 11 0.00039 36.9 2.2 72 63-143 58-136 (335)
357 1eg5_A Aminotransferase; PLP-d 40.7 29 0.00098 34.3 5.3 66 5-73 66-136 (384)
358 1pq4_A Periplasmic binding pro 40.5 1.4E+02 0.0049 28.6 10.2 82 257-385 189-271 (291)
359 3gvc_A Oxidoreductase, probabl 40.3 75 0.0026 30.2 8.1 100 231-339 30-134 (277)
360 1d2f_A MALY protein; aminotran 39.9 16 0.00056 36.6 3.3 66 5-73 92-158 (390)
361 1wyu_B Glycine dehydrogenase s 39.5 32 0.0011 35.8 5.5 69 3-73 126-200 (474)
362 3rjz_A N-type ATP pyrophosphat 39.3 2.4E+02 0.0083 26.3 15.4 149 237-418 11-173 (237)
363 1elu_A L-cysteine/L-cystine C- 39.3 9.9 0.00034 38.0 1.5 64 4-69 80-147 (390)
364 4dqx_A Probable oxidoreductase 39.2 90 0.0031 29.6 8.4 99 231-338 28-131 (277)
365 2huf_A Alanine glyoxylate amin 39.1 27 0.00091 34.8 4.8 66 4-74 74-141 (393)
366 3tpc_A Short chain alcohol deh 38.7 70 0.0024 29.8 7.5 99 231-338 8-115 (257)
367 4fn4_A Short chain dehydrogena 38.7 93 0.0032 29.4 8.2 100 230-339 7-116 (254)
368 3ppi_A 3-hydroxyacyl-COA dehyd 38.7 1.1E+02 0.0038 28.8 9.0 95 237-338 35-139 (281)
369 1bs0_A Protein (8-amino-7-oxon 37.5 31 0.0011 34.3 4.9 50 4-56 103-152 (384)
370 3gem_A Short chain dehydrogena 37.0 55 0.0019 30.8 6.4 97 230-338 28-128 (260)
371 2epl_X N-acetyl-beta-D-glucosa 36.4 96 0.0033 33.7 8.8 26 323-348 138-163 (627)
372 1fob_A Beta-1,4-galactanase; B 36.3 1.7E+02 0.0057 28.8 10.1 39 319-357 49-87 (334)
373 3ftb_A Histidinol-phosphate am 36.0 18 0.00062 35.6 2.9 58 6-72 84-141 (361)
374 1t3i_A Probable cysteine desul 36.0 32 0.0011 34.5 4.8 66 5-73 95-166 (420)
375 1jg8_A L-ALLO-threonine aldola 35.8 15 0.0005 36.1 2.1 65 4-74 57-124 (347)
376 3hbx_A GAD 1, glutamate decarb 35.6 31 0.0011 36.3 4.7 72 3-75 120-201 (502)
377 1e5e_A MGL, methionine gamma-l 35.5 23 0.00079 36.0 3.6 50 4-56 81-134 (404)
378 4e6p_A Probable sorbitol dehyd 35.4 1.3E+02 0.0043 28.0 8.8 95 237-338 13-112 (259)
379 1hjs_A Beta-1,4-galactanase; 4 35.4 85 0.0029 31.0 7.7 39 319-357 49-87 (332)
380 2hox_A ALLIIN lyase 1; cystein 35.1 23 0.00078 36.4 3.5 49 4-53 127-181 (427)
381 4eso_A Putative oxidoreductase 34.9 1E+02 0.0034 28.8 7.9 95 237-338 13-112 (255)
382 3b1d_A Betac-S lyase; HET: PLP 40.9 8.3 0.00028 38.9 0.0 95 30-130 36-142 (392)
383 3grp_A 3-oxoacyl-(acyl carrier 34.6 1.1E+02 0.0036 28.9 8.0 95 237-338 32-131 (266)
384 2yl5_A Beta-N-acetylhexosamini 34.0 30 0.001 35.9 4.2 29 320-348 85-113 (442)
385 4ibo_A Gluconate dehydrogenase 34.0 1.9E+02 0.0064 27.2 9.7 99 231-338 27-133 (271)
386 1gc0_A Methionine gamma-lyase; 33.1 33 0.0011 34.6 4.4 50 4-56 84-137 (398)
387 3m1a_A Putative dehydrogenase; 33.0 1.2E+02 0.004 28.6 8.2 95 237-338 10-109 (281)
388 3mc6_A Sphingosine-1-phosphate 32.6 30 0.001 36.1 4.0 71 3-74 129-204 (497)
389 3h7a_A Short chain dehydrogena 32.3 2E+02 0.007 26.5 9.6 95 237-338 12-113 (252)
390 3hdo_A Histidinol-phosphate am 32.2 24 0.00082 34.9 3.0 48 6-56 88-135 (360)
391 3pxx_A Carveol dehydrogenase; 32.0 86 0.003 29.6 7.0 99 231-338 11-127 (287)
392 2o23_A HADH2 protein; HSD17B10 31.6 1.5E+02 0.0053 27.3 8.7 95 237-338 17-122 (265)
393 3tzq_B Short-chain type dehydr 31.3 1.5E+02 0.0052 27.8 8.6 100 231-339 12-118 (271)
394 4dyv_A Short-chain dehydrogena 31.2 1.4E+02 0.0047 28.2 8.2 100 230-338 28-133 (272)
395 2ew8_A (S)-1-phenylethanol deh 31.2 1.9E+02 0.0064 26.6 9.1 95 237-338 12-112 (249)
396 3l6e_A Oxidoreductase, short-c 31.2 96 0.0033 28.5 7.0 96 237-339 8-108 (235)
397 2z9v_A Aspartate aminotransfer 30.9 36 0.0012 33.8 4.2 66 4-74 63-130 (392)
398 1fc4_A 2-amino-3-ketobutyrate 30.7 34 0.0012 34.2 4.0 50 4-56 109-158 (401)
399 3tfo_A Putative 3-oxoacyl-(acy 30.6 1.9E+02 0.0065 27.1 9.1 100 231-339 5-112 (264)
400 2w8t_A SPT, serine palmitoyltr 30.5 46 0.0016 33.9 4.9 50 4-56 128-177 (427)
401 3sc4_A Short chain dehydrogena 30.4 2.5E+02 0.0085 26.5 10.0 99 231-338 10-123 (285)
402 1iug_A Putative aspartate amin 30.4 31 0.001 33.7 3.4 61 4-69 55-117 (352)
403 1hxh_A 3BETA/17BETA-hydroxyste 30.3 2E+02 0.0067 26.6 9.1 95 237-338 11-110 (253)
404 4fc7_A Peroxisomal 2,4-dienoyl 29.9 2.1E+02 0.007 26.9 9.3 99 231-338 28-135 (277)
405 3t7c_A Carveol dehydrogenase; 29.3 2.1E+02 0.0071 27.3 9.3 99 231-338 29-148 (299)
406 3rih_A Short chain dehydrogena 29.1 2.4E+02 0.0083 26.8 9.7 100 231-339 42-150 (293)
407 3kvo_A Hydroxysteroid dehydrog 29.0 3E+02 0.01 27.0 10.6 99 231-338 46-159 (346)
408 3ecd_A Serine hydroxymethyltra 28.8 48 0.0017 33.2 4.7 67 4-74 98-169 (425)
409 1uls_A Putative 3-oxoacyl-acyl 28.8 81 0.0028 29.2 6.0 93 237-338 10-107 (245)
410 3lyl_A 3-oxoacyl-(acyl-carrier 28.7 2.5E+02 0.0084 25.6 9.5 95 237-338 10-112 (247)
411 1bqc_A Protein (beta-mannanase 28.7 1.2E+02 0.0041 29.1 7.4 51 270-351 36-86 (302)
412 2yl6_A Beta-N-acetylhexosamini 28.6 32 0.0011 35.6 3.3 29 320-348 82-110 (434)
413 3op4_A 3-oxoacyl-[acyl-carrier 28.3 1.6E+02 0.0054 27.2 8.0 95 237-338 14-113 (248)
414 3gbx_A Serine hydroxymethyltra 28.0 22 0.00075 35.8 1.9 66 6-74 98-166 (420)
415 3isl_A Purine catabolism prote 27.9 44 0.0015 33.4 4.2 64 6-74 68-133 (416)
416 1lc5_A COBD, L-threonine-O-3-p 27.8 25 0.00087 34.7 2.3 63 63-130 61-127 (364)
417 3ksu_A 3-oxoacyl-acyl carrier 27.8 2.2E+02 0.0076 26.4 9.0 99 231-338 12-121 (262)
418 3is3_A 17BETA-hydroxysteroid d 27.7 1.3E+02 0.0046 28.1 7.5 99 231-338 19-126 (270)
419 3mad_A Sphingosine-1-phosphate 27.7 34 0.0012 36.0 3.4 69 4-74 164-237 (514)
420 3h7f_A Serine hydroxymethyltra 27.7 33 0.0011 35.3 3.2 67 4-74 111-182 (447)
421 3n74_A 3-ketoacyl-(acyl-carrie 27.5 2.2E+02 0.0076 26.2 9.0 95 237-338 14-114 (261)
422 3n9k_A Glucan 1,3-beta-glucosi 27.4 84 0.0029 32.0 6.2 57 271-351 78-134 (399)
423 3kki_A CAI-1 autoinducer synth 27.1 57 0.002 32.7 4.9 50 4-56 123-172 (409)
424 1oft_A SULA, hypothetical prot 27.0 3.2E+02 0.011 23.8 10.9 102 231-345 48-154 (161)
425 3f9i_A 3-oxoacyl-[acyl-carrier 26.8 1.8E+02 0.0063 26.5 8.2 76 229-315 14-89 (249)
426 2bkw_A Alanine-glyoxylate amin 26.7 60 0.002 32.0 4.9 67 6-74 65-134 (385)
427 1h4p_A Glucan 1,3-beta-glucosi 26.7 88 0.003 31.9 6.2 59 271-352 78-136 (408)
428 2l8b_A Protein TRAI, DNA helic 26.6 2.4E+02 0.0084 25.3 8.2 124 205-351 33-158 (189)
429 4gkb_A 3-oxoacyl-[acyl-carrier 26.6 3.1E+02 0.011 25.7 9.7 136 230-390 7-148 (258)
430 3gaf_A 7-alpha-hydroxysteroid 26.3 2.7E+02 0.0092 25.7 9.3 99 231-338 13-118 (256)
431 1yht_A DSPB; beta barrel, hydr 26.3 66 0.0022 32.4 5.0 75 271-348 38-113 (367)
432 3qr3_A Endoglucanase EG-II; TI 26.0 1.3E+02 0.0045 29.7 7.2 26 329-354 83-108 (340)
433 3ayr_A Endoglucanase; TIM barr 25.9 1.5E+02 0.0052 29.5 7.8 59 268-352 64-125 (376)
434 4hvk_A Probable cysteine desul 25.9 48 0.0016 32.5 4.0 66 6-74 66-136 (382)
435 1m32_A 2-aminoethylphosphonate 25.5 40 0.0014 32.9 3.3 67 4-74 60-127 (366)
436 3edm_A Short chain dehydrogena 25.3 3.5E+02 0.012 24.9 9.9 95 237-338 13-117 (259)
437 4dmm_A 3-oxoacyl-[acyl-carrier 25.2 1.6E+02 0.0056 27.5 7.6 100 231-339 29-137 (269)
438 3sju_A Keto reductase; short-c 24.9 2.2E+02 0.0074 26.8 8.4 99 231-338 25-131 (279)
439 2rfv_A Methionine gamma-lyase; 24.8 47 0.0016 33.3 3.7 50 4-56 83-136 (398)
440 3bzy_B ESCU; auto cleavage pro 24.7 37 0.0013 26.3 2.2 21 331-351 28-48 (83)
441 3tsc_A Putative oxidoreductase 24.6 1.7E+02 0.0057 27.5 7.5 100 231-339 12-132 (277)
442 3ezl_A Acetoacetyl-COA reducta 24.6 3.8E+02 0.013 24.3 10.0 101 229-338 12-121 (256)
443 2bwn_A 5-aminolevulinate synth 24.5 83 0.0028 31.3 5.6 50 6-56 112-161 (401)
444 3uve_A Carveol dehydrogenase ( 24.5 2.5E+02 0.0087 26.3 8.9 99 231-338 12-135 (286)
445 1vl8_A Gluconate 5-dehydrogena 24.4 2.2E+02 0.0077 26.5 8.4 95 237-338 26-129 (267)
446 2vi8_A Serine hydroxymethyltra 24.3 47 0.0016 33.1 3.6 64 7-74 92-160 (405)
447 3rkr_A Short chain oxidoreduct 24.3 2.7E+02 0.0091 25.7 8.9 99 231-338 30-137 (262)
448 3qlj_A Short chain dehydrogena 23.9 2.1E+02 0.0071 27.6 8.3 100 231-339 28-145 (322)
449 3gi1_A LBP, laminin-binding pr 23.7 1.9E+02 0.0063 27.8 7.6 60 257-352 178-237 (286)
450 2c07_A 3-oxoacyl-(acyl-carrier 23.5 4.5E+02 0.015 24.4 11.1 95 237-338 49-151 (285)
451 2zy4_A L-aspartate beta-decarb 23.3 56 0.0019 34.8 4.1 65 4-69 169-238 (546)
452 4b79_A PA4098, probable short- 23.3 1.9E+02 0.0066 27.0 7.4 133 230-391 11-143 (242)
453 3imf_A Short chain dehydrogena 23.1 3E+02 0.01 25.3 8.9 100 231-339 7-114 (257)
454 1oaa_A Sepiapterin reductase; 23.1 2.9E+02 0.0098 25.4 8.8 95 237-338 11-125 (259)
455 3ucx_A Short chain dehydrogena 23.0 2.4E+02 0.0082 26.1 8.3 96 237-339 16-120 (264)
456 3s55_A Putative short-chain de 22.9 3.3E+02 0.011 25.4 9.3 95 237-338 15-129 (281)
457 4imr_A 3-oxoacyl-(acyl-carrier 22.8 3.3E+02 0.011 25.5 9.2 101 231-338 34-139 (275)
458 3zv4_A CIS-2,3-dihydrobiphenyl 22.8 1.9E+02 0.0066 27.2 7.6 62 237-305 10-71 (281)
459 3oid_A Enoyl-[acyl-carrier-pro 22.8 3.5E+02 0.012 24.9 9.3 99 231-338 5-112 (258)
460 1hdc_A 3-alpha, 20 beta-hydrox 22.7 2.3E+02 0.0079 26.1 8.0 95 237-338 10-109 (254)
461 1x1t_A D(-)-3-hydroxybutyrate 22.5 3.3E+02 0.011 25.0 9.1 95 237-338 9-113 (260)
462 2aeu_A Hypothetical protein MJ 22.4 44 0.0015 33.4 2.9 46 78-128 80-128 (374)
463 2cho_A Glucosaminidase, hexosa 22.3 1.8E+02 0.0063 32.0 8.0 34 223-258 81-114 (716)
464 1i4n_A Indole-3-glycerol phosp 22.3 63 0.0021 30.7 3.7 79 260-349 78-156 (251)
465 3r1i_A Short-chain type dehydr 22.2 1.5E+02 0.0052 28.0 6.6 95 237-338 37-139 (276)
466 3oec_A Carveol dehydrogenase ( 22.0 3.3E+02 0.011 26.1 9.2 99 231-338 47-165 (317)
467 3v2h_A D-beta-hydroxybutyrate 21.9 3.6E+02 0.012 25.3 9.4 96 237-339 30-135 (281)
468 3zu3_A Putative reductase YPO4 21.8 3.4E+02 0.012 27.5 9.3 20 374-393 223-242 (405)
469 3sx2_A Putative 3-ketoacyl-(ac 21.8 3E+02 0.01 25.6 8.7 93 237-338 18-128 (278)
470 2jah_A Clavulanic acid dehydro 21.7 3.1E+02 0.011 25.0 8.7 95 237-338 12-114 (247)
471 3l77_A Short-chain alcohol deh 21.7 2.3E+02 0.0078 25.6 7.7 95 237-338 7-110 (235)
472 3tjr_A Short chain dehydrogena 21.7 2.5E+02 0.0085 26.7 8.2 95 237-338 36-138 (301)
473 2o1e_A YCDH; alpha-beta protei 21.3 3E+02 0.01 26.6 8.7 26 257-285 189-214 (312)
474 3rku_A Oxidoreductase YMR226C; 20.8 3.6E+02 0.012 25.4 9.1 96 237-339 38-147 (287)
475 2rhc_B Actinorhodin polyketide 20.5 3.3E+02 0.011 25.4 8.7 95 237-338 27-129 (277)
476 3e03_A Short chain dehydrogena 20.5 3.3E+02 0.011 25.3 8.7 95 237-338 11-120 (274)
477 1geg_A Acetoin reductase; SDR 20.4 3.7E+02 0.013 24.5 9.0 95 237-338 7-109 (256)
478 2vt1_B Surface presentation of 20.4 50 0.0017 26.1 2.2 22 329-350 26-47 (93)
479 3asu_A Short-chain dehydrogena 20.2 3.8E+02 0.013 24.4 9.0 94 237-338 5-105 (248)
480 3ei9_A LL-diaminopimelate amin 20.2 56 0.0019 33.1 3.2 90 30-123 61-164 (432)
481 3kgw_A Alanine-glyoxylate amin 20.2 95 0.0032 30.5 4.9 65 5-74 79-145 (393)
482 3pgx_A Carveol dehydrogenase; 20.1 2.1E+02 0.0072 26.8 7.2 99 231-338 16-135 (280)
483 3v2g_A 3-oxoacyl-[acyl-carrier 20.1 3.9E+02 0.013 24.8 9.1 96 237-339 36-140 (271)
484 4hp8_A 2-deoxy-D-gluconate 3-d 20.0 2.5E+02 0.0086 26.3 7.5 135 230-391 9-148 (247)
485 3acz_A Methionine gamma-lyase; 20.0 35 0.0012 34.3 1.6 50 4-56 78-131 (389)
No 1
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=1.3e-51 Score=437.64 Aligned_cols=370 Identities=25% Similarity=0.488 Sum_probs=292.7
Q ss_pred cchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHh-ccCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy14428 146 DIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIY-EKNLDHEYANIGGDAKFCKLAAQLAYGEDF 224 (583)
Q Consensus 146 ~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~-~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g 224 (583)
++++++.+...+++...+++|||++|.+.++.+.+++++.++++.. +. .....++|++..|.++||++|++|+.+.++
T Consensus 12 ~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~ 90 (405)
T 3k7y_A 12 EVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNS 90 (405)
T ss_dssp CCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSC
T ss_pred CCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 4667888887777667789999999997555566667899999987 54 334467899999999999999999988887
Q ss_pred CCCCCCCe--EEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHH
Q psy14428 225 PAFKDNRL--AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 225 ~~~~~~~I--~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~ 302 (583)
..+++++| ++ |+|+++|+.++..++..+. | |+|++++|+|+.|..+++.+|++++.+|+.+++++++|++.+++
T Consensus 91 ~~~~~~~i~i~~--t~G~~~al~~~~~~l~~~~-~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 166 (405)
T 3k7y_A 91 KYIEDKKICTIQ--CIGGTGAIFVLLEFLKMLN-V-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLN 166 (405)
T ss_dssp TTTTTTCEEEEE--EEHHHHHHHHHHHHHHTTT-C-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHH
T ss_pred ccccccceEEEE--cCchHHHHHHHHHHHHhcC-C-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHH
Confidence 77888865 66 9999999999754443322 6 99999999999999999999999999998555568999999999
Q ss_pred HHHcCCCCcEEEEe-CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEe
Q psy14428 303 DIKAMPERSILFLQ-TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQ 381 (583)
Q Consensus 303 ~l~~~~~~~~~i~i-~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~ 381 (583)
++.+. ++++++++ ++||||||.+++.+++++|+++|++++++||+||+|.+|.+++...+..++..+.+..+++|+++
T Consensus 167 ~l~~~-~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 245 (405)
T 3k7y_A 167 DLRNI-PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQ 245 (405)
T ss_dssp HHHHS-CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEE
T ss_pred HHHhC-CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEe
Confidence 98653 33445555 55699999999999999999999999999999999999998742223445666655568999999
Q ss_pred cCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 382 SFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 382 S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
||||+|+|||||+||+++..++++..+.+.+.+.+..+..+++++.++|.+++.+++++
T Consensus 246 S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~--------------------- 304 (405)
T 3k7y_A 246 SFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQ--------------------- 304 (405)
T ss_dssp ECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCH---------------------
T ss_pred eCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCH---------------------
Confidence 99999999999999998644553222234445555566677788888888888887663
Q ss_pred hccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCCCCcccccccccceeecCCChh
Q psy14428 462 GFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKIL----DKGSKKNWDHITNQKGMFCYTGLSAS 537 (583)
Q Consensus 462 ~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~----~~~~pg~~~~~~~~~g~f~~~~l~~~ 537 (583)
.+.+.|.+++++++++|.++|+.+.+.|+ +++.|+.|.+..+++|||+|.+++.+
T Consensus 305 ---------------------~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~~ 363 (405)
T 3k7y_A 305 ---------------------NLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAK 363 (405)
T ss_dssp ---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGGG
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCHH
Confidence 23457888999999999999999999999 88878889999999999999988765
Q ss_pred hhhhhhhhhhHHHHHHHHhhcCCCccccccccCCcceeecCCCCC
Q psy14428 538 QGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 582 (583)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (583)
..++ + ++.++.+. +.|+|||++++++
T Consensus 364 ~~~~-----L-~~~gV~v~-------------p~~Ris~a~~~~~ 389 (405)
T 3k7y_A 364 IAEH-----L-KTHHIYII-------------NNGRINVSGITKN 389 (405)
T ss_dssp GTTT-----T-TTTTEECC-------------TTSEEEGGGCCTT
T ss_pred HHHH-----H-HHCCEeec-------------CCCeEEEeccCHH
Confidence 4433 2 22222221 2368999998876
No 2
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=1e-52 Score=446.60 Aligned_cols=373 Identities=37% Similarity=0.631 Sum_probs=305.2
Q ss_pred ccchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy14428 145 EDIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDF 224 (583)
Q Consensus 145 ~~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g 224 (583)
.|+++|+.+...++++.++ +|||++|.+.++.|.|++++.|++|.+.+.+.+..+.|.|..|+++||+++++++.+..
T Consensus 27 ~p~d~i~~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~~- 104 (420)
T 4h51_A 27 QAPDVIFDLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGNT- 104 (420)
T ss_dssp CCCCHHHHHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC---
T ss_pred CCCChHHHHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCCC-
Confidence 3678999998888777766 89999999988999998999999999988877666789999999999999999986543
Q ss_pred CCCCCCCeEEEecCCchhHHHHHHHHHH-HhCCCCCEEEEcCCCChhhHHHHhhcCCe-EEEEecccCCCCCCChhhHHH
Q psy14428 225 PAFKDNRLAIVQGISGSGSLRVGTAFLE-RFYPGVKTVYFPTPTWNGHVRFCTDSRLN-VGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 225 ~~~~~~~I~i~~t~G~~~al~l~~~~l~-~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~d~~~~g~d~~~l~~ 302 (583)
...+++..++|.|+++|+..++.++. .+.+|||+|++++|+|++|..+++.+|++ +..+++.+++++++|++.+.+
T Consensus 105 --~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~ 182 (420)
T 4h51_A 105 --VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKK 182 (420)
T ss_dssp ---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHH
T ss_pred --ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHH
Confidence 45577888889999999988765543 35568999999999999999999999997 445666566678899999999
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEec
Q psy14428 303 DIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQS 382 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S 382 (583)
.++..+++++++++++||||||.+++.++|++|+++|+++++++|+||+|.+|.+++.+.+...+..+.+..++++++.|
T Consensus 183 ~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 262 (420)
T 4h51_A 183 DILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQS 262 (420)
T ss_dssp HHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEE
T ss_pred HHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEec
Confidence 99888899999999999999999999999999999999999999999999999998632233445555667789999999
Q ss_pred CcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh
Q psy14428 383 FSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG 462 (583)
Q Consensus 383 ~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~ 462 (583)
|||+|+|+|+|+||+++.+++.+ ...+..+++..+.+.
T Consensus 263 ~SK~~~~~G~RvG~~~~~~~~~~------------------------------------------~~~~~~~~l~~~~r~ 300 (420)
T 4h51_A 263 FSKNMGLYSERAGTLSLLLKDKT------------------------------------------KRADVKSVMDSLIRE 300 (420)
T ss_dssp CTTTSCCGGGCEEEEEEECSCHH------------------------------------------HHHHHHHHHHHHHHT
T ss_pred cccccccccCceEEEEecccCHH------------------------------------------HHHHHHHHHHHhhhc
Confidence 99999999999999999433221 112233344445556
Q ss_pred ccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhh
Q psy14428 463 FYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSN 542 (583)
Q Consensus 463 ~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~ 542 (583)
.++++|..|..++..++.++.+..+|.++++.|+++|.++|+.|.+.|++.+.|+.|.++.+++|||+|+++++++++.
T Consensus 301 ~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~e~v~~- 379 (420)
T 4h51_A 301 EYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLSKAQCEY- 379 (420)
T ss_dssp TTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCHHHHHH-
T ss_pred ccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcCHHHHHH-
Confidence 6667777777777777777888899999999999999999999999999999999999999999999999999987643
Q ss_pred hhhhhHHHHHHHHhhcCCCccccccccCCcceeecCCCCC
Q psy14428 543 RISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 582 (583)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (583)
++ +.++++. +.|++||++++++
T Consensus 380 ----L~-e~~Vy~~-------------~~gRis~Agl~~~ 401 (420)
T 4h51_A 380 ----CQ-NHNIFIT-------------VSGRANMAGLTHE 401 (420)
T ss_dssp ----HH-HTTEECC-------------TTCEEEGGGCCHH
T ss_pred ----HH-hCCEEEc-------------CCCEEEeccCCHH
Confidence 22 2222221 2268999988764
No 3
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.5e-46 Score=398.36 Aligned_cols=378 Identities=49% Similarity=0.875 Sum_probs=302.3
Q ss_pred cchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCC
Q psy14428 146 DIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFP 225 (583)
Q Consensus 146 ~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~ 225 (583)
++++++.+...++...+++.|+|+.|.+.+..++|++.+.+.+++.++.......+|++..|.++||+++++++.+++|+
T Consensus 11 ~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 90 (401)
T 7aat_A 11 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSE 90 (401)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred CCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcc
Confidence 35567777776666677889999999984445666667889998888775434678999999999999999999999999
Q ss_pred CCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHH
Q psy14428 226 AFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 226 ~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
.+++++|++++|+|+++++.++...+..+.++||+|++++|+|..+...++..|++++.+|+.+++++++|++.+++.++
T Consensus 91 ~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 170 (401)
T 7aat_A 91 AFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDIS 170 (401)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHT
T ss_pred ccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHH
Confidence 99999997777999999999876555556677999999999999999999999999999998444468999999999987
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 306 AMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
+..+++++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++.+.+..++..+.+..+++|+++||||
T Consensus 171 ~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 250 (401)
T 7aat_A 171 KIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAK 250 (401)
T ss_dssp TSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTT
T ss_pred hCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCc
Confidence 76678899999999999999999999999999999999999999999999987521123455555566789999999999
Q ss_pred cccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccC
Q psy14428 386 NMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYS 465 (583)
Q Consensus 386 ~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~ 465 (583)
+||++|+|+||+++...+++..+.+++.+....+....+++.+.|.+++.+++++
T Consensus 251 ~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------- 305 (401)
T 7aat_A 251 NMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTP------------------------- 305 (401)
T ss_dssp TSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCH-------------------------
T ss_pred ccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCH-------------------------
Confidence 9999999999999743332211236677777666777777788887777777653
Q ss_pred CCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhhhhh
Q psy14428 466 NPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNRIS 545 (583)
Q Consensus 466 ~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~~~ 545 (583)
.+...|.++++++++++.++|+.+.+.|++.+.++.+.+..+++|+|.|.+++.+.+..
T Consensus 306 -----------------~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 364 (401)
T 7aat_A 306 -----------------ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVER---- 364 (401)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHH----
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCCHHHHHH----
Confidence 23456777889999999999999999999987666677788999999999887654432
Q ss_pred hhHHHHHHHHhhcCCCccccccccCCcceeecCCCCCC
Q psy14428 546 SIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQ 583 (583)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (583)
+.++.+..+ .+.+++||+.+++++
T Consensus 365 -ll~~~gi~v-------------~~~~Ris~~~~~~~~ 388 (401)
T 7aat_A 365 -LTKEFSIYM-------------TKDGRISVAGVASSN 388 (401)
T ss_dssp -HHHHHCEEC-------------CTTCEEEGGGCCTTT
T ss_pred -HHHhCCEec-------------cCCCeEEeccCChhh
Confidence 222222111 123589998888764
No 4
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=5.5e-45 Score=389.25 Aligned_cols=374 Identities=37% Similarity=0.666 Sum_probs=295.2
Q ss_pred cchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCC
Q psy14428 146 DIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFP 225 (583)
Q Consensus 146 ~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~ 225 (583)
++++++.+...+.+...+++|||+.|.+.++.+.+++++.+.+++.+........+|++..|.++||+++++++....+.
T Consensus 32 ~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~ 111 (420)
T 4f4e_A 32 PRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSP 111 (420)
T ss_dssp CCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred CCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCcc
Confidence 46678888776665667899999999654444555567899999988887644678999999999999999999887776
Q ss_pred CCCCC--CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHH
Q psy14428 226 AFKDN--RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 303 (583)
Q Consensus 226 ~~~~~--~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~ 303 (583)
.++++ +|++ |+|+++|+.++..++..+ .+||+|++++|+|..+...++..|++++.+|+.+++++++|++.+++.
T Consensus 112 ~~~~~~~~i~~--t~G~t~al~~~~~~~~~~-~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 188 (420)
T 4f4e_A 112 LIAAGRVVTAQ--ALGGTGALKIGADFLRTL-NPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAA 188 (420)
T ss_dssp HHHTTCEEEEE--EEHHHHHHHHHHHHHHHH-CTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHH
T ss_pred ccccCceEEEE--CCccHHHHHHHHHHHHHh-CCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHH
Confidence 67889 8999 999999999975444434 559999999999999999999999999999985455688999999999
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecC
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
+++..++++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. .+..++..+.+..+++|+++||
T Consensus 189 l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~ 267 (420)
T 4f4e_A 189 LNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIE-ADAAAVRLFAAANLNVFVSSSF 267 (420)
T ss_dssp HTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTT-GGGHHHHHHHHTTCCEEEEEEC
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcc-hhhHHHHHHHhcCCCEEEEEeC
Confidence 965557889999999999999999999999999999999999999999999999742 2455677766667899999999
Q ss_pred cccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc
Q psy14428 384 SKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF 463 (583)
Q Consensus 384 SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~ 463 (583)
||+||++|+|+||+++.+++++..+.++..++...+..+.+++.+.|.+++.++++.
T Consensus 268 SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------- 324 (420)
T 4f4e_A 268 SKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASP----------------------- 324 (420)
T ss_dssp TTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCH-----------------------
T ss_pred CccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCH-----------------------
Confidence 999999999999998643443212223444554555667777888888887777653
Q ss_pred cCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhhh
Q psy14428 464 YSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNR 543 (583)
Q Consensus 464 ~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~ 543 (583)
.+...|.++++++++++.++|+.+.+.|++.+.++++.+..+++|+|+|..++.+.+..
T Consensus 325 -------------------~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-- 383 (420)
T 4f4e_A 325 -------------------ELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTSAQVDR-- 383 (420)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCHHHHHH--
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCCHHHHHH--
Confidence 23345777889999999999999999999976544577788999999999987654332
Q ss_pred hhhhHHHHHHHHhhcCCCccccccccCCcceeecCCCCCC
Q psy14428 544 ISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQ 583 (583)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (583)
+.++.+..+. +.|++||+.+++++
T Consensus 384 ---~l~~~gI~v~-------------~~~Ris~~~~~~~~ 407 (420)
T 4f4e_A 384 ---LREEFGIYAV-------------STGRICVAALNTRN 407 (420)
T ss_dssp ---HHHHHCEECC-------------TTSEEEGGGCCTTT
T ss_pred ---HHHhCCEEec-------------CCCeEEEecCCHHH
Confidence 2222222221 12588888877764
No 5
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=1.1e-44 Score=390.33 Aligned_cols=378 Identities=35% Similarity=0.646 Sum_probs=300.3
Q ss_pred cchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHh--ccCCCCCCCCCCCCHHHHHHHHHHHhCCC
Q psy14428 146 DIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIY--EKNLDHEYANIGGDAKFCKLAAQLAYGED 223 (583)
Q Consensus 146 ~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~--~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~ 223 (583)
+.++++.+...++++.++.+|+|+.|.+.+..+++++.+.+.+++.++. ......+|.+..|.++||+++++++....
T Consensus 32 ~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~ 111 (448)
T 3meb_A 32 PPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKD 111 (448)
T ss_dssp CCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTT
T ss_pred CCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCC
Confidence 4667888888777778888999999999555566778899999988776 22336789999999999999999995333
Q ss_pred CCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh----hcCCeEEEEecccCC-CCCCChh
Q psy14428 224 FPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT----DSRLNVGAYRYFDNK-TNGLDFA 298 (583)
Q Consensus 224 g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~d~~-~~g~d~~ 298 (583)
...+++++|+++||+|+++|+.++..++..+. +||+|++++|+|..+...++ ..|++++.+|+.|++ ++++|++
T Consensus 112 ~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~-~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e 190 (448)
T 3meb_A 112 SKAAQEGRIASCQSLSGTGSLHIGFEFLHLWM-PKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFS 190 (448)
T ss_dssp CHHHHTTCEEEEEESHHHHHHHHHHHHHHHHC-TTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHH
T ss_pred ccccCcCcEEEEECCcHHHHHHHHHHHHHHhC-CCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHH
Confidence 22345799999999999999998654444444 59999999999999999999 999999999985554 5899999
Q ss_pred hHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 299 GMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 299 ~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
.+++.+.+..++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++.+.+..++..+.+..+++|
T Consensus 191 ~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 270 (448)
T 3meb_A 191 NTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVL 270 (448)
T ss_dssp HHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEE
T ss_pred HHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEE
Confidence 99999976556789999999999999999999999999999999999999999999998752112345666656678999
Q ss_pred EEecCcccccccCccceEEEEEc--------CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHH
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLT--------PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETE 450 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~--------p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 450 (583)
+++||||+||++|+|+||+..++ ++++..+++++.+....+..+.+++.++|.+++.+++++
T Consensus 271 ~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---------- 340 (448)
T 3meb_A 271 VAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDK---------- 340 (448)
T ss_dssp EEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSH----------
T ss_pred EEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcCh----------
Confidence 99999999999999999984333 222222267777777777788888888888888888763
Q ss_pred HHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----Cccccccc
Q psy14428 451 RIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKK-----NWDHITNQ 525 (583)
Q Consensus 451 ~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg-----~~~~~~~~ 525 (583)
.+...|.++++++++++.++|+.+.+.|++.+.|| .|.+..++
T Consensus 341 --------------------------------~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~ 388 (448)
T 3meb_A 341 --------------------------------RLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTA 388 (448)
T ss_dssp --------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHC
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCC
Confidence 23456888899999999999999999999987777 58888899
Q ss_pred ccceeecCCChhhhhhhhhhhhHHHHHHHHhhcCCCccccccccCCcceeecCCCCCC
Q psy14428 526 KGMFCYTGLSASQGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQ 583 (583)
Q Consensus 526 ~g~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (583)
+|+|+|.+++.+.... +.++.+..+ ..|+ |++||+++++++
T Consensus 389 ~g~~~~~~~~~~~~~~-----ll~~~gV~v-~~G~-----------gRis~a~~~~~~ 429 (448)
T 3meb_A 389 IGMFTFTGLTPEHVDY-----LKEKWSIYL-VKAG-----------GRMSMCGLTESN 429 (448)
T ss_dssp CSSEEECCCCHHHHHH-----HHHHHCEEE-CSGG-----------GEEEGGGCCTTT
T ss_pred ceEEEecCCCHHHHHH-----HHHhCCEEE-eCCC-----------cEEEEecCCHHH
Confidence 9999999997644332 223322222 1111 588988887764
No 6
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=4e-44 Score=381.07 Aligned_cols=371 Identities=39% Similarity=0.709 Sum_probs=288.2
Q ss_pred cchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCC
Q psy14428 146 DIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFP 225 (583)
Q Consensus 146 ~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~ 225 (583)
++++++.+...+++...++.|+|+.|.+.+..+++.+.+.+.++ . .....+|.+..|.++||+++++++.+..+.
T Consensus 24 ~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a----~-~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~ 98 (409)
T 4eu1_A 24 KPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA----T-LGTNMDYAPVTGIASFVEEAQKLCFGPTCA 98 (409)
T ss_dssp ---CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTC----C-CCSCCCCCCTTCCHHHHHHHHHHHHCSSCH
T ss_pred CCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhc----C-ccccccCCCCCCcHHHHHHHHHHHcCCCch
Confidence 35567777777676778899999999983333434444444444 2 233678999999999999999999655555
Q ss_pred CCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHH
Q psy14428 226 AFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 226 ~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
.+++++|..++|.|+++++.++..++..+.++||+|++++|+|..+...++..|++++.+|+.+++++++|++.+++.++
T Consensus 99 ~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 178 (409)
T 4eu1_A 99 ALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLD 178 (409)
T ss_dssp HHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHH
T ss_pred hhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHH
Confidence 55688995555999999999876666677788999999999999999999999999999998545568899999999997
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 306 AMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
+..++++++++||||||||.+++.+++++|+++|+++|++||+||+|.+|.+++...+..++..+.+..+++|+++||||
T Consensus 179 ~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 258 (409)
T 4eu1_A 179 KAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSK 258 (409)
T ss_dssp HSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTT
T ss_pred hCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcc
Confidence 65557788889999999999999999999999999999999999999999987511123455555556789999999999
Q ss_pred cccccCccceEE--EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc
Q psy14428 386 NMGLYGERVGTF--SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF 463 (583)
Q Consensus 386 ~~~l~GlRiG~l--v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~ 463 (583)
+||++|+|+||+ ++ ++++..+.+++.+....+..+.+++.+.|.++..+++++.
T Consensus 259 ~~g~~G~riG~~~~v~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------------------- 314 (409)
T 4eu1_A 259 NFGLYGHRCGALHIST--ASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQ---------------------- 314 (409)
T ss_dssp TSSCGGGCCEEEEEEC--SSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHH----------------------
T ss_pred cccCccCCceEEEEEe--CCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHH----------------------
Confidence 999999999998 55 5532222377888777777788888999999888887632
Q ss_pred cCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhhhhhhh
Q psy14428 464 YSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQGMSNR 543 (583)
Q Consensus 464 ~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~ 543 (583)
+...|.++++++++++.++|+.+.+.|++.+.|+.+.+..+++|+|.|.+++.+....
T Consensus 315 --------------------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 372 (409)
T 4eu1_A 315 --------------------LTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLTREQVEL-- 372 (409)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCCHHHHHH--
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCCHHHHHH--
Confidence 3346777888999999999999999999987777787788999999998887543221
Q ss_pred hhhhHHHHHHHHhhcCCCccccccccCCcceeecCCCCCC
Q psy14428 544 ISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQ 583 (583)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (583)
+.++.+..+. +.+++|++.+++++
T Consensus 373 ---ll~~~gv~v~-------------p~~Ri~~~~~~~~~ 396 (409)
T 4eu1_A 373 ---LRSEYHIYMT-------------LNGRAAVSGLNSTN 396 (409)
T ss_dssp ---HHHHHCEECC-------------TTCEEEGGGCCTTT
T ss_pred ---HHHcCCEEEc-------------CCCEEEEEecCHhh
Confidence 2222221111 22588998888764
No 7
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.9e-42 Score=366.12 Aligned_cols=343 Identities=37% Similarity=0.645 Sum_probs=276.8
Q ss_pred cchhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHH-HhccCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy14428 146 DIKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERR-IYEKNLDHEYANIGGDAKFCKLAAQLAYGEDF 224 (583)
Q Consensus 146 ~~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~-~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g 224 (583)
+.++++.+...+..+..++.|+|+.|.+.++.+++++++.+.+++.+ ........+|++..|.++||+++++++...++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~ 88 (397)
T 3fsl_A 9 AGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADH 88 (397)
T ss_dssp CCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTC
T ss_pred CCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCc
Confidence 45677777766666677889999999754444545466899999988 77654467899999999999999999988777
Q ss_pred CCCCCC--CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHH
Q psy14428 225 PAFKDN--RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 225 ~~~~~~--~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~ 302 (583)
..++++ +|++ |+|+++++.++..++..+ .+||+|++++|+|..+...++..|++++.+|+.+++++++|++.+++
T Consensus 89 ~~~~~~~~~i~~--t~g~~~a~~~~~~~~~~~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 165 (397)
T 3fsl_A 89 PVLKQQRVATIQ--TLGGSGALKVGADFLKRY-FPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLA 165 (397)
T ss_dssp HHHHTTCEEEEE--ESHHHHHHHHHHHHHHHH-CTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHH
T ss_pred ccccccceEEEE--cCCcHHHHHHHHHHHHhc-CCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHH
Confidence 677899 8999 999999999874444334 45999999999999999999999999999998444568899999999
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEec
Q psy14428 303 DIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQS 382 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S 382 (583)
.+.+..++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++.. .+..++..+.+..+++|+++|
T Consensus 166 ~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S 244 (397)
T 3fsl_A 166 TLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGME-EDAYAIRAIASAGLPALVSNS 244 (397)
T ss_dssp HHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTT-GGGHHHHHHHHTTCCEEEEEE
T ss_pred HHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcc-cccHHHHHHHhcCCCEEEEec
Confidence 9965556789999999999999999999999999999999999999999999998731 244566666667789999999
Q ss_pred CcccccccCccceEEEEEcCCchhHHHHHHH----HHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHH
Q psy14428 383 FSKNMGLYGERVGTFSVLTPTSDETERIMSQ----LKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 383 ~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~----l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 458 (583)
|||++|++|+|+||+++.+++ ++++++ +....+..+.+++.++|.+++.++.+..
T Consensus 245 ~SK~~~~~G~riG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------------- 303 (397)
T 3fsl_A 245 FSKIFSLYGERVGGLSVMCED----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEA----------------- 303 (397)
T ss_dssp CTTTTTCGGGCCEEEEEECSS----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHH-----------------
T ss_pred ccccccCcCCCeeEEEEecCC----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHH-----------------
Confidence 999999999999999873333 244443 3333345566778888888888777632
Q ss_pred HHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChhh
Q psy14428 459 LIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSASQ 538 (583)
Q Consensus 459 ~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~~ 538 (583)
+...|.++++++++++.++|+.+.+.|++...++++.+..+++|+|.|..++.+.
T Consensus 304 -------------------------l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (397)
T 3fsl_A 304 -------------------------LKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQ 358 (397)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCHHH
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCCHHH
Confidence 2344667788889999999999999999876443577778899999999887644
No 8
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=7e-41 Score=356.28 Aligned_cols=348 Identities=38% Similarity=0.725 Sum_probs=274.3
Q ss_pred chhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHH-HhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCC
Q psy14428 147 IKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERR-IYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFP 225 (583)
Q Consensus 147 ~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~-~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~ 225 (583)
+++++.+...+.+..+++.++|+.|.+.+..+.+++++.+.+++.+ ........+|.+..|.++||+++++++.+.+|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~ 92 (412)
T 1yaa_A 13 PDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSD 92 (412)
T ss_dssp CCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred CCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCC
Confidence 4556666665554456788999999985445555677899999988 775434567999999999999999999877888
Q ss_pred CCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHH
Q psy14428 226 AFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 226 ~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
.+++++|++++|+|+++|+.++..++..+. +||+|++++|+|..+...++..|++++.+|+.+++++++|++.+++.+.
T Consensus 93 ~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~-~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 171 (412)
T 1yaa_A 93 ALQEDRVISVQSLSGTGALHISAKFFSKFF-PDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQ 171 (412)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHHHHHC-TTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHH
T ss_pred CCCcceEEEEeccchHhHHHHHHHHHHHhC-CCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHH
Confidence 888999998889999999998754555555 5999999999999999999999999999998444457899999999886
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcC---cEEEEec
Q psy14428 306 AMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVG---QLCLAQS 382 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~---~vi~i~S 382 (583)
...++++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++...+..++..+....+ ++|+++|
T Consensus 172 ~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 251 (412)
T 1yaa_A 172 KAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQS 251 (412)
T ss_dssp HSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEE
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEec
Confidence 5433567777899999999999999999999999999999999999999988631002234545444445 8999999
Q ss_pred CcccccccCccceEEEEEcC----CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHH
Q psy14428 383 FSKNMGLYGERVGTFSVLTP----TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 383 ~SK~~~l~GlRiG~lv~~~p----~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 458 (583)
|||.+|++|+|+||+++++. +++..+.+++++....+..+.+++.+.|.++..++++..
T Consensus 252 ~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~----------------- 314 (412)
T 1yaa_A 252 FAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPE----------------- 314 (412)
T ss_dssp CTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHH-----------------
T ss_pred cCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHH-----------------
Confidence 99999988999999982121 211111388888876667777889999999888886632
Q ss_pred HHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChh
Q psy14428 459 LIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 537 (583)
Q Consensus 459 ~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~ 537 (583)
+...|.++++++++++.++|+.+.+.|++.+.++.+.+..+++|+|.|..++.+
T Consensus 315 -------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (412)
T 1yaa_A 315 -------------------------LTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQ 368 (412)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHH
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCHH
Confidence 123455668888899999999999999987644446677789999999887654
No 9
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=2.7e-40 Score=349.40 Aligned_cols=346 Identities=35% Similarity=0.648 Sum_probs=259.2
Q ss_pred chhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC
Q psy14428 147 IKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA 226 (583)
Q Consensus 147 ~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~ 226 (583)
.++++.+...+....+++.|||+.|.+.+..+.+++++.+.+++.+.+.....++|.+..|.++||+++++++.+.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~ 89 (396)
T 2q7w_A 10 ADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSAL 89 (396)
T ss_dssp C-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHH
T ss_pred CchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCc
Confidence 34455554444333456789999999654444445678899998877654345689999999999999999997766655
Q ss_pred CCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 227 FKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 227 ~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
+++++|+++.|+|+++|++++..++..+. +||+|++++|+|..+...++..|++++.+|+..++++++|++.+++.+.+
T Consensus 90 ~~~~~v~~~~~~g~~~a~~~~~~~~~~~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 168 (396)
T 2q7w_A 90 INDKRARTAQTPGGTGALRVAADFLAKNT-SVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNE 168 (396)
T ss_dssp HHTTCEEEEEESHHHHHHHHHHHHHHHHS-CCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTT
T ss_pred cccccEEEEecccchhhHHHHHHHHHHhC-CCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHh
Confidence 77899986569999999999754444344 59999999999999999999999999999983224578999999999864
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
..++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ....++..+....+++++++||||.
T Consensus 169 ~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~ 247 (396)
T 2q7w_A 169 AQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLE-EDAEGLRAFAAMHKELIVASSYSXN 247 (396)
T ss_dssp CCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHH-HHTHHHHHHHHHCSCEEEEEECTTT
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcc-chhHHHHHHHhcCCcEEEEEecccc
Confidence 434578899999999999999999999999999999999999999999988620 0223555554446789999999999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCC
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSN 466 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~ 466 (583)
+|++|+|+||+++.+++++..+++++.+....+..+.+++.++|.++..++++..
T Consensus 248 ~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------------------------- 302 (396)
T 2q7w_A 248 FGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDA------------------------- 302 (396)
T ss_dssp TTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHH-------------------------
T ss_pred ccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChh-------------------------
Confidence 9999999999996223432223567777666666677779999999988887632
Q ss_pred CccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 467 PPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 467 ~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+...|.++++++++++.++|+.+.+.|++.+.++.+.+..+++|+|.|..++.
T Consensus 303 -----------------l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (396)
T 2q7w_A 303 -----------------LRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTK 355 (396)
T ss_dssp -----------------HHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCH
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCCH
Confidence 11234556777888889999999999998764434666778999999998764
No 10
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=4.3e-40 Score=350.01 Aligned_cols=346 Identities=45% Similarity=0.821 Sum_probs=272.9
Q ss_pred chhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCCCCCCCCCCCHHHHHHHHHHHhCCCCC
Q psy14428 147 IKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLDHEYANIGGDAKFCKLAAQLAYGEDFP 225 (583)
Q Consensus 147 ~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~ 225 (583)
.+++..+...+++..+++.++|+.|.+.+..+.+.+++.+.+++.+...+ ...++|.+..|.++||+++++++.+.+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~ 93 (412)
T 1ajs_A 14 PVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSP 93 (412)
T ss_dssp CCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred CchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCC
Confidence 55676666655544567889999999744444455778999998887732 23567999999999999999999877788
Q ss_pred CCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC-----CEEEEcCCCChhhHHHHhhcCCe-EEEEecccCCCCCCChhh
Q psy14428 226 AFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV-----KTVYFPTPTWNGHVRFCTDSRLN-VGAYRYFDNKTNGLDFAG 299 (583)
Q Consensus 226 ~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g-----d~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~d~~~~g~d~~~ 299 (583)
.+++++|++++|+|+++|+.++..++..+ .+| |+|++++|+|..+...++..|++ ++.+|+.+++++++|++.
T Consensus 94 ~~~~~~v~~~~t~gg~~a~~~~~~~~~~~-~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 172 (412)
T 1ajs_A 94 ALQEKRVGGVQSLGGTGALRIGAEFLARW-YNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQG 172 (412)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHHHHH-SSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHH
T ss_pred ccCCCcEEEEECCCcHHHHHHHHHHHHHh-CcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHH
Confidence 78899998888999999999975444434 458 99999999999999999999999 999998323457899999
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 300 MMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 300 l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
+++.+.....+++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++......++..+....+++|+
T Consensus 173 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 252 (412)
T 1ajs_A 173 FLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFC 252 (412)
T ss_dssp HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEE
T ss_pred HHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEE
Confidence 99998654457788889999999999999999999999999999999999999999886300023355555445678999
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHH
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 459 (583)
+.||||.+|++|+|+||+++..++++..+.+++.+....+..+.+++.++|.++..++++..
T Consensus 253 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------------------ 314 (412)
T 1ajs_A 253 AQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPE------------------ 314 (412)
T ss_dssp EEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHH------------------
T ss_pred EEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcc------------------
Confidence 99999999988999999998222422222366666665666677778999998888886531
Q ss_pred HhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 460 IRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 460 ~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
+...|.++++++++++.++++.+.+.|++.+.|+.+.+..+++|+|.|..++
T Consensus 315 ------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (412)
T 1ajs_A 315 ------------------------LFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN 366 (412)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC
T ss_pred ------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC
Confidence 1233556678888899999999999999876555566677899999998876
No 11
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=3e-39 Score=341.30 Aligned_cols=344 Identities=31% Similarity=0.591 Sum_probs=263.7
Q ss_pred chhhHhhccccccCCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC
Q psy14428 147 IKPLKQQLKGFNKDPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA 226 (583)
Q Consensus 147 ~~~i~~l~~~~~~~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~ 226 (583)
+++++.+...+.....++.+||+.|.+.+..+.+++++.+.+++.+.......++|++..|.++||+++++++... .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~---~ 86 (394)
T 2ay1_A 10 PDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD---G 86 (394)
T ss_dssp CCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG---G
T ss_pred CccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC---C
Confidence 4455555554444456788999999975444444567899999888765434678999999999999999998532 2
Q ss_pred CCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 227 FKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 227 ~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
+++++|++++|+|+++|+.++..++..+. +||+|++++|+|..+...++..|++++.+|+..++++++|++.+++.++.
T Consensus 87 ~~~~~v~~~~~~g~~~a~~~~~~~~~~~~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 165 (394)
T 2ay1_A 87 LKSETTATLATVGGTGALRQALELARMAN-PDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAA 165 (394)
T ss_dssp CCGGGEEEEEEEHHHHHHHHHHHHHHHHC-TTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHT
T ss_pred CCcccEEEEecCCchhHHHHHHHHHHhcC-CCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHh
Confidence 37789887679999999999755544444 59999999999999999999999999999983224578999999999875
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
..++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .+..++..+....+++++++||||.
T Consensus 166 ~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~ 244 (394)
T 2ay1_A 166 AKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLE-EDAAGTRLIASRIPEVLIAASCSKN 244 (394)
T ss_dssp CCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHH-HHHHHHHHHHHHCSSEEEEEECTTT
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcc-cchHHHHHHhhcCCCEEEEEeccCC
Confidence 444578888999999999999999999999999999999999999999987520 0233455444446789999999999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCC
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSN 466 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~ 466 (583)
+|++|+|+||+++.+++++..+.+++.+....+..+.+++.++|.++..++++..
T Consensus 245 ~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------------------------- 299 (394)
T 2ay1_A 245 FGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPE------------------------- 299 (394)
T ss_dssp TTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHH-------------------------
T ss_pred CcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChH-------------------------
Confidence 9999999999997333432112344555544556666778888888888876532
Q ss_pred CccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCChh
Q psy14428 467 PPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSAS 537 (583)
Q Consensus 467 ~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~~ 537 (583)
+...|.++++++++++.++|+.+.+.|++.+.++.+.+..+++|+|.|..++.+
T Consensus 300 -----------------l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~ 353 (394)
T 2ay1_A 300 -----------------LRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATPE 353 (394)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCHH
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCHH
Confidence 123355567788888999999999999887544346666788999999988753
No 12
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=6.1e-40 Score=346.04 Aligned_cols=298 Identities=16% Similarity=0.143 Sum_probs=246.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
.++.|+|+.|+++.. +++.+.+++.+.+... ..+|++..|.++||+++++++...+|+.+++++|++ |+|++
T Consensus 30 ~~~~i~l~~~~~~~~-----~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~g~~ 101 (385)
T 1b5p_A 30 GVDLVALTAGEPDFD-----TPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIV--TVGGS 101 (385)
T ss_dssp TCCCEECCCSSCSSC-----CCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEE--ESHHH
T ss_pred CCCEEEecCCCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEE--cCChH
Confidence 467899999988522 4577888877766543 457999899999999999999988899899999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ ++ +++++|++.+++.+ .+++++++++|||
T Consensus 102 ~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l---~~~~~~v~~~~p~ 174 (385)
T 1b5p_A 102 QALFNL---FQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVET-LPEEGFVPDPERVRRAI---TPRTKALVVNSPN 174 (385)
T ss_dssp HHHHHH---HHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEC-CGGGTTCCCHHHHHTTC---CTTEEEEEEESSC
T ss_pred HHHHHH---HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeec-CcccCCCCCHHHHHHhc---CCCCEEEEEeCCC
Confidence 999985 4455677999999999999999999999999999999 44 45678998887766 4568899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|+++|++||+||+|.++.+++ ...++..+ +. +++|+++||||.+|++|+|+||+++
T Consensus 175 NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~-~~-~~~i~~~s~SK~~~~~G~RiG~~~~- 248 (385)
T 1b5p_A 175 NPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG---EHFSPGRV-AP-EHTLTVNGAAKAFAMTGWRIGYACG- 248 (385)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS---CCCCGGGT-CT-TTEEEEEESTTTTTCGGGCCEEEEC-
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC---CCCCHHHc-CC-CCEEEEEechhhcCCcccceEEEEe-
Confidence 999999999999999999999999999999999998864 12233333 22 7899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++...+.....+++.+.|.++..++++...
T Consensus 249 -~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-------------------------------------- 284 (385)
T 1b5p_A 249 -P-----KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEA-------------------------------------- 284 (385)
T ss_dssp -C-----HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHH--------------------------------------
T ss_pred -C-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCc--------------------------------------
Confidence 7 58999998887777778999999988887754100
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
. .++++++++++.++|+.+.+.|++++ +.+..+++|+|.|..++
T Consensus 285 ----~---~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~ 328 (385)
T 1b5p_A 285 ----S---RAFVEMAREAYRRRRDLLLEGLTALG----LKAVRPSGAFYVLMDTS 328 (385)
T ss_dssp ----H---HHHHHHHHHHHHHHHHHHHHHHHHHT----CCBCCCSBTTEEEEECT
T ss_pred ----c---hHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEecC
Confidence 0 12255667777888999999998863 55667889999997764
No 13
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=3.3e-39 Score=347.57 Aligned_cols=305 Identities=14% Similarity=0.148 Sum_probs=249.8
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.++.|+|+.|.|+.. .++++.+.+++.+.+... ...+|++..|.++||+++++++.+.+|++ ++++|++ |+|
T Consensus 75 ~~~~i~l~~g~p~~~---~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~v~~--t~G 148 (448)
T 3aow_A 75 TSDIISLAGGLPNPK---TFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMI--TSG 148 (448)
T ss_dssp TSSSEECCCCCCCGG---GSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TTSEEEE--ESS
T ss_pred CCCcEeCCCCCCCch---hCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-ChhhEEE--eCc
Confidence 467899999998643 235678888887776542 23689999999999999999997667776 8899999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc---CCCCcEEE-E
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA---MPERSILF-L 315 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~---~~~~~~~i-~ 315 (583)
+++++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ ++ .++|++.+++.+.. ...+++++ +
T Consensus 149 ~~~al~~~---~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~--~g~d~~~L~~~l~~~~~~~~~~k~v~~ 222 (448)
T 3aow_A 149 SQQALDLI---GRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPL-DD--EGMKVEILEEKLKELKSQGKKVKVVYT 222 (448)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEE-ET--TEECHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHH---HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEecc-CC--CCCCHHHHHHHHhhhhccCCCCeEEEE
Confidence 99999985 4456777999999999999999999999999999999 55 36899999998851 11356775 6
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccce
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG 395 (583)
+|+||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ...+++..+ +..+++|+++||||.++ ||+|+|
T Consensus 223 ~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g--~~~~~~~~~-~~~~~vi~~~S~SK~~~-~GlriG 298 (448)
T 3aow_A 223 VPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG--NPEKKIKAL-DNEGRVIYLGTFSKILA-PGFRIG 298 (448)
T ss_dssp CCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSS--CCCCCTGGG-CTTSCEEEEEESTTTTC-GGGCCE
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC--CCCcCHHhc-CCCCCEEEEccchhhcc-ccccEE
Confidence 89999999999999999999999999999999999999999875 223344443 34578999999999999 999999
Q ss_pred EEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHH
Q psy14428 396 TFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIV 475 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~ 475 (583)
|+++ + +++++++.........++|.++|.++..++++..
T Consensus 299 ~v~~--~-----~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~---------------------------------- 337 (448)
T 3aow_A 299 WMVG--D-----PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGY---------------------------------- 337 (448)
T ss_dssp EEEE--C-----HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTH----------------------------------
T ss_pred EEEe--C-----HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCC----------------------------------
Confidence 9999 7 5899999887777677889999999988886521
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
|.++++++++++.++|+.+.+.|++.. |+.+.+..+++|+|.|..++.
T Consensus 338 ------------~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~g~~~~~p~~g~~~~v~~~~ 385 (448)
T 3aow_A 338 ------------LEKHIPEIRKFYKPRRDAMLEALEEFM-PEGVKWTKPEGGMFIWVTLPD 385 (448)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHHHHHC-CTTCEECCCSBSSEEEEECST
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEeCCCccEEEEEEcCC
Confidence 234467777888899999999998753 433566678899999988764
No 14
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-38 Score=339.51 Aligned_cols=303 Identities=12% Similarity=0.087 Sum_probs=249.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
..++.|+|+.|.++.. +++.+.+++.+.+......+|++..|.++||+++++++.+.+|..+++++|++ |+|+
T Consensus 55 ~~~~~i~l~~g~~~~~-----~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~--t~G~ 127 (447)
T 3b46_A 55 QGRELINLGQGFFSYS-----PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTV--TTGA 127 (447)
T ss_dssp TTSCCEECCCCSCSSC-----CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEE--ESHH
T ss_pred cCCCeEEccCCCCCCC-----CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCCH
Confidence 4567899999988532 45788888888776422468999999999999999999988898899999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-----------CCCCChhhHHHHHHcCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-----------TNGLDFAGMMEDIKAMPE 309 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-----------~~g~d~~~l~~~l~~~~~ 309 (583)
++|+.++ +..++.+||+|++++|+|..+...++..|++++.+|+ +++ ++++|++.+++.+ .+
T Consensus 128 ~~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~~~~~~~~~d~~~l~~~l---~~ 200 (447)
T 3b46_A 128 NEGILSC---LMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPI-NPPKELDQRNTRGEEWTIDFEQFEKAI---TS 200 (447)
T ss_dssp HHHHHHH---HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEE-ECCGGGGTSCBCSTTSEECHHHHHTTC---CT
T ss_pred HHHHHHH---HHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeC-CCccccccccccccCcccCHHHHHHhh---cc
Confidence 9999985 4445677999999999999999999999999999998 443 4678999888776 46
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH-HHhcCcEEEEecCccccc
Q psy14428 310 RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF-AKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~-~~~~~~vi~i~S~SK~~~ 388 (583)
+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ +..++..+ .+..++++++.||||.++
T Consensus 201 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~~~~~~~~~~i~i~S~sK~~~ 277 (447)
T 3b46_A 201 KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD---SFTRIATLSPEIGQLTLTVGSAGKSFA 277 (447)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS---CCCCGGGSCHHHHTTEEEEEEHHHHTT
T ss_pred CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC---CCcCHHHcCCCCCCcEEEEecCchhcC
Confidence 78999999999999999999999999999999999999999999999875 12233332 233578999999999999
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCc
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPP 468 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p 468 (583)
++|+|+||+++ ++ +++++.+........++++.+.|.++..++++..
T Consensus 278 ~~G~riG~~~~--~~----~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~--------------------------- 324 (447)
T 3b46_A 278 ATGWRIGWVLS--LN----AELLSYAAKAHTRICFASPSPLQEACANSINDAL--------------------------- 324 (447)
T ss_dssp CTTSCCEEEEC--SC----HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH---------------------------
T ss_pred CcchhhEEEEe--CC----HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCc---------------------------
Confidence 99999999998 54 4789999887777777889999998888775311
Q ss_pred cchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 469 IHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 469 ~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 325 -------------------~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~ 369 (447)
T 3b46_A 325 -------------------KIGYFEKMRQEYINKFKIFTSIFDELG----LPYTAPEGTYFVLVDFSK 369 (447)
T ss_dssp -------------------HHTHHHHHHHHHHHHHHHHHHHHHHHT----CCEECCSBSSEEEEECTT
T ss_pred -------------------chHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCeeEEEEEeccc
Confidence 112356677788899999999998874 445678899999987753
No 15
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=6.6e-38 Score=335.30 Aligned_cols=324 Identities=14% Similarity=0.136 Sum_probs=249.7
Q ss_pred chhhHhhccccccCCC--CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q psy14428 147 IKPLKQQLKGFNKDPH--PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDF 224 (583)
Q Consensus 147 ~~~i~~l~~~~~~~~~--~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g 224 (583)
.++++.+...++...+ ++.|+|+.|.++. .+..++++.+.+++.+.+......+|.+..|.++||+++++++.+. +
T Consensus 36 ~~~i~~~~~~~~~~~~~~~~~i~l~~g~~~~-~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~ 113 (427)
T 3dyd_A 36 FNPIRAIVDNMKVKPNPNKTMISLSIGDPTV-FGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-E 113 (427)
T ss_dssp -----------CCCCCTTSCCEECCCSCTTT-TSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-T
T ss_pred cchHHHHHHHHhhcccCCCCEEeCCCcCCCc-cCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-C
Confidence 4567777665554444 3569999999753 2334477899999988876644568999999999999999999876 8
Q ss_pred CCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHH
Q psy14428 225 PAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 225 ~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
..+++++|++ |+|+++|+.++ +..+..+||+|++++|+|..+...++..|++++.+|+.+++++++|++.+++.+
T Consensus 114 ~~~~~~~v~~--t~g~t~al~~~---~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 188 (427)
T 3dyd_A 114 APLEAKDVIL--TSGCSQAIDLC---LAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLI 188 (427)
T ss_dssp BCCCGGGEEE--ESSHHHHHHHH---HHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSC
T ss_pred CCCChHHEEE--ecCcHHHHHHH---HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHh
Confidence 8889999999 99999999985 444567799999999999999999999999999999843345788999888776
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
.++++++++++||||||.+++.+++++|+++|+++++++|+||+|.+|.+++. ...++..+ +...++|+++|||
T Consensus 189 ---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~--~~~~~~~~-~~~~~vi~~~S~s 262 (427)
T 3dyd_A 189 ---DEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDC--KYEPLATL-STDVPILSCGGLA 262 (427)
T ss_dssp ---CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSC--CCCCGGGG-CSSCCEEEEEEST
T ss_pred ---ccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCC--cCccHHHh-CCCCcEEEEeecc
Confidence 45788999999999999999999999999999999999999999999998762 33334333 3346799999999
Q ss_pred ccccccCccceEEEEEcCCch--hHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh
Q psy14428 385 KNMGLYGERVGTFSVLTPTSD--ETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG 462 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~--~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~ 462 (583)
|+|+++|+|+||+++ +++. ..+++++.+...... .++++.+.|.++..++++..
T Consensus 263 K~~~~~G~riG~~~~--~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~--------------------- 318 (427)
T 3dyd_A 263 KRWLVPGWRLGWILI--HDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTP--------------------- 318 (427)
T ss_dssp TTSSCGGGCCEEEEE--ECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSC---------------------
T ss_pred ccCCCcCcceEEEEe--cCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcC---------------------
Confidence 999999999999999 5421 002577777766543 56788999998888875310
Q ss_pred ccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 463 FYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 463 ~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
. +.++++++++.++|+.+.+.|+++ || +....+++|+|.|..++.
T Consensus 319 -----------------------~---~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~p~~g~~~~~~l~~ 363 (427)
T 3dyd_A 319 -----------------------G---EFYHNTLSFLKSNADLCYGALAAI--PG-LRPVRPSGAMYLMVGIEM 363 (427)
T ss_dssp -----------------------H---HHHHHHHHHHHHHHHHHHHHHHHS--TT-EEEECCSBTTEEEEEECG
T ss_pred -----------------------H---HHHHHHHHHHHHHHHHHHHHHhcC--CC-ceecCCCeeEEEEEecCH
Confidence 0 114455667778888999999875 43 666778999999987663
No 16
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=6.5e-37 Score=334.13 Aligned_cols=315 Identities=16% Similarity=0.151 Sum_probs=249.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc--C-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK--N-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~--~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
..++.++++.| +. .+|.+.+.++ .+.+.. + ....|.+..|.++||+++++++.+++|+.+++++|++ |
T Consensus 93 ~~p~~i~~~~~-~~-----~~p~~~~~~a-~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t 163 (500)
T 3tcm_A 93 DHPDLLQREEI-KT-----LFSADSISRA-KQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFL--T 163 (500)
T ss_dssp HSGGGGGCTTH-HH-----HSCHHHHHHH-HHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEE--E
T ss_pred cCcccccCCCC-cc-----cCCHHHHHHH-HHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEE--c
Confidence 45667777765 21 2344555555 444443 2 4678999999999999999999988888899999999 9
Q ss_pred CCchhHHHHHHHHHHHhC-CCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 238 ISGSGSLRVGTAFLERFY-PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~-~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
+|+++++.++ +..++ .+||+|++++|+|+.+...++..|++++.+++.++.++++|++.+++.++.. ..++++
T Consensus 164 ~G~~~al~~~---~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ 240 (500)
T 3tcm_A 164 DGASPGVHLM---MQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRA 240 (500)
T ss_dssp SSSHHHHHHH---HHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHH---HHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceE
Confidence 9999999985 44555 6799999999999999999999999999999943335799999999998642 236788
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH------hcCcEEEEecCcccc
Q psy14428 314 FLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK------EVGQLCLAQSFSKNM 387 (583)
Q Consensus 314 i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~------~~~~vi~i~S~SK~~ 387 (583)
++++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. ....++..+.. ...++|+++||||+|
T Consensus 241 ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~ 319 (500)
T 3tcm_A 241 LVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDN-KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGY 319 (500)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTT-CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTT
T ss_pred EEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCC-CCCCcHHHHHHHhccccCCeEEEEEecCCccC
Confidence 88999999999999999999999999999999999999999998642 23345544322 224689999999999
Q ss_pred -cccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCC
Q psy14428 388 -GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSN 466 (583)
Q Consensus 388 -~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~ 466 (583)
|++|+|+||+++.+.+ +++++.+.+... ...+++.++|.++..+++++..
T Consensus 320 ~g~~G~R~G~~~~~~~~----~~~~~~l~~~~~-~~~~~~~~~q~~~~~~l~~~~~------------------------ 370 (500)
T 3tcm_A 320 YGECGKRGGYFEITGFS----APVREQIYKIAS-VNLCSNITGQILASLVMNPPKA------------------------ 370 (500)
T ss_dssp TCCGGGCCEEEEEESCC----TTHHHHHHHHHH-TTCCCCHHHHHHHHHHHSCCCS------------------------
T ss_pred CCCCccceEEEEEeCCC----HHHHHHHHHHHh-cccCCCHHHHHHHHHHhcCccc------------------------
Confidence 8999999999984323 368888887653 5678899999999988875210
Q ss_pred CccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCC
Q psy14428 467 PPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGL 534 (583)
Q Consensus 467 ~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l 534 (583)
.......|.++++++++++.++|+.+.+.|++. || +.+..+++|+|.|..+
T Consensus 371 --------------~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--~g-~~~~~~~g~~~~~~~~ 421 (500)
T 3tcm_A 371 --------------SDESYASYKAEKDGILASLARRAKALEHAFNKL--EG-ITCNEAEGAMYVFPQI 421 (500)
T ss_dssp --------------SSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--TT-EECCCCCBTTEECCEE
T ss_pred --------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CC-cEEecCCeEEEEeeee
Confidence 011234577778889999999999999999885 33 6778899999999543
No 17
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.6e-38 Score=338.10 Aligned_cols=327 Identities=18% Similarity=0.255 Sum_probs=253.2
Q ss_pred chhhHhhccccccC----CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCC
Q psy14428 147 IKPLKQQLKGFNKD----PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGE 222 (583)
Q Consensus 147 ~~~i~~l~~~~~~~----~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~ 222 (583)
+++++.+...+++. .+.+.|+|+.|.+.+..+.+.+++.+.+++.++... ...+|.+..|.++||+++++++.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~la~~~~~~ 95 (413)
T 3t18_A 17 PDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEKDYRKIVIDTLFGP 95 (413)
T ss_dssp CCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCHHHHHHHHHHHHGG
T ss_pred CChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCHHHHHHHHHHHhcc
Confidence 55666665543321 245789999999865555566778898887765432 2467999999999999999999765
Q ss_pred CCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHH
Q psy14428 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 223 ~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~ 302 (583)
++.. ++++|++ |+|+++|+.++ +..++.+||+|++++|+|..|...++..|++++.+|+ +++++++|++.+++
T Consensus 96 ~~~~-~~~~i~~--t~g~~~al~~~---~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~ 168 (413)
T 3t18_A 96 YKPE-GYISAIA--TPGGTGAIRSA---IFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEF-FTDDFAFNIDVYKE 168 (413)
T ss_dssp GCCS-SEEEEEE--ESHHHHHHHHH---HHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECC-BCTTSSBCHHHHHH
T ss_pred cCcc-ccCcEEE--cCccHHHHHHH---HHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeec-cCCCCCcCHHHHHH
Confidence 5433 5569999 99999999985 4556777999999999999999999999999999998 34447999999999
Q ss_pred HHHcC-CCCcE-EEEeCCC-CCCCCCCCCHHHHHHHHHHHH------hcCeEEEEeccCCCCCCCCCCCchHHHH-HHHH
Q psy14428 303 DIKAM-PERSI-LFLQTSS-HNPTGVDLSEDQWRQLAVVVK------QRHLYPFFDMAYLGLTSGDFDKDAFSLR-YFAK 372 (583)
Q Consensus 303 ~l~~~-~~~~~-~i~i~~p-~NPTG~~~s~~~~~~l~~~a~------~~~i~iI~De~Y~~l~~~~~~~~~~~~~-~~~~ 372 (583)
.+... .++++ ++++++| |||||.+++.+++++|+++|+ +++++||+||+|.+|.+++. ...++. .+.+
T Consensus 169 ~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~ 246 (413)
T 3t18_A 169 AIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGD--QQRKFFEKFSN 246 (413)
T ss_dssp HHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSS--TTTGGGGGGTT
T ss_pred HHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChh--hHHHHHHHHhh
Confidence 88531 11344 8889999 999999999999999999999 89999999999999998762 222322 2222
Q ss_pred hcCc--EEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhcc----ccCCChHHHHHHHHHhCChhhhhhh
Q psy14428 373 EVGQ--LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGF----YSNPPIHGARIVTEILSDPKLKAQC 446 (583)
Q Consensus 373 ~~~~--vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~----~~~~s~~~q~~~~~~l~~~~~~~~~ 446 (583)
..++ +|+++||||+||++|+|+||+++.+++ +++++.+.+..... +.+++.++|.++..++++..
T Consensus 247 ~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----- 317 (413)
T 3t18_A 247 LPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSS----KEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAEN----- 317 (413)
T ss_dssp CCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESC----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHH-----
T ss_pred cCCCeeEEEEEecCccCCCcCcCcEEEEEecCC----HHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChH-----
Confidence 2334 589999999999999999999982224 57888888765432 35688888888888876532
Q ss_pred hhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccc
Q psy14428 447 DETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQK 526 (583)
Q Consensus 447 ~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~ 526 (583)
+.. |.++++++++++.++++.+.+.|++.+ +.+..+++
T Consensus 318 -------------------------------------~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~ 355 (413)
T 3t18_A 318 -------------------------------------KKI-YEQELVDLRNMLKSRADVFVTAAKENK----LTMIPYFG 355 (413)
T ss_dssp -------------------------------------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCS
T ss_pred -------------------------------------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHcC----CCccCCCc
Confidence 112 566677888889999999999998874 55677899
Q ss_pred cceeecCC
Q psy14428 527 GMFCYTGL 534 (583)
Q Consensus 527 g~f~~~~l 534 (583)
|+|.|..+
T Consensus 356 ~~~~~~~~ 363 (413)
T 3t18_A 356 GFFTFIPT 363 (413)
T ss_dssp SSCEEEEC
T ss_pred eEEEEeCC
Confidence 99999765
No 18
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.1e-38 Score=341.17 Aligned_cols=306 Identities=14% Similarity=0.176 Sum_probs=240.6
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHH---------HHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-----
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAE---------RRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK----- 228 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~---------~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~----- 228 (583)
++.|+|+.|.|+.+ .+|...+..++ ..... ...+|++..|+++||++|++++.+.+|+..+
T Consensus 31 ~~~i~l~~G~p~~~---~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~ 105 (425)
T 2r2n_A 31 KSMISLAGGLPNPN---MFPFKTAVITVENGKTIQFGEEMMK--RALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPS 105 (425)
T ss_dssp TTCEECCCCCCCGG---GCSEEEEEEEETTSCCEEECHHHHH--HHTSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGG
T ss_pred CCeEEcCCcCCCch---hCCHHHHHHHHhhcccccccccchh--hhcCCCCCCCCHHHHHHHHHHHHHhcCCCCcccccc
Confidence 67899999999754 22221111110 00011 1357999999999999999999887787764
Q ss_pred --CCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 229 --DNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 229 --~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
+++|++ |+|+++++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ ++ .++|++.+++.+++
T Consensus 106 ~~~~~i~~--t~G~~~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~--~~~d~~~l~~~l~~ 177 (425)
T 2r2n_A 106 QGQMDLCV--TSGSQQGLCKV---FEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVAS-DE--SGIVPDSLRDILSR 177 (425)
T ss_dssp GTCEEEEE--ESSHHHHHHHH---HHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEECE-ET--TEECHHHHHHHHTT
T ss_pred CCcCcEEE--eCcHHHHHHHH---HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeCc-CC--CCCCHHHHHHHHHh
Confidence 379999 99999999985 4556777999999999999999999999999999998 54 47899999998863
Q ss_pred CC---------CCcEEE-EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCc
Q psy14428 307 MP---------ERSILF-LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQ 376 (583)
Q Consensus 307 ~~---------~~~~~i-~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 376 (583)
.. ++++++ ++|+||||||.+++.+++++|+++|+++|++||+||+|.++.|++. ...++..+ +..++
T Consensus 178 ~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~--~~~~~~~~-~~~~~ 254 (425)
T 2r2n_A 178 WKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKF--RVPTFLSM-DVDGR 254 (425)
T ss_dssp SCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSS--CCCCTGGG-CTTSC
T ss_pred hhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCC--CCCCcccc-CCCCC
Confidence 21 345665 4589999999999999999999999999999999999999988752 33344443 34578
Q ss_pred EEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHH
Q psy14428 377 LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456 (583)
Q Consensus 377 vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l 456 (583)
+|+++||||+++ ||+|+||+++ + +++++++.........+++.+.|.++..++++..
T Consensus 255 ~i~~~s~SK~~~-~GlRiG~~~~--~-----~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~--------------- 311 (425)
T 2r2n_A 255 VIRADSFSKIIS-SGLRIGFLTG--P-----KPLIERVILHIQVSTLHPSTFNQLMISQLLHEWG--------------- 311 (425)
T ss_dssp EEEEEESTTTTC-STTCCEEEEE--E-----HHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHH---------------
T ss_pred EEEEccchhhcc-CccceEEEec--C-----HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcc---------------
Confidence 999999999999 9999999999 6 5899999988877778999999999888775310
Q ss_pred HHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 457 ~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+.|.++++++++++.++|+.+.+.|++.. ||...+..+++|+|.|..++.
T Consensus 312 ----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~p~~g~~~~~~~~~ 362 (425)
T 2r2n_A 312 ----------------------------EEGFMAHVDRVIDFYSNQKDAILAAADKWL-TGLAEWHVPAAGMFLWIKVKG 362 (425)
T ss_dssp ----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEECCCSBSSEEEEEETT
T ss_pred ----------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEeCCCceEEEEEEeCC
Confidence 022445678888899999999999998753 332244568999999987754
No 19
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=8e-38 Score=333.28 Aligned_cols=330 Identities=18% Similarity=0.287 Sum_probs=254.4
Q ss_pred cchhhHhhccccccC----CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhC
Q psy14428 146 DIKPLKQQLKGFNKD----PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYG 221 (583)
Q Consensus 146 ~~~~i~~l~~~~~~~----~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~ 221 (583)
.+++++.+...+++. .+.++|+|+.|+|.+..+.+.+++.+.+++.++... ...+|++..|.++||+++++++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~~~~ 95 (418)
T 3rq1_A 17 LKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIPDFLCAAEKECFG 95 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCHHHHHHHHHHHHG
T ss_pred CCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChHHHHHHHHHHHhc
Confidence 355666665443321 245789999999865555566788888887665432 246799999999999999999976
Q ss_pred CCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHH
Q psy14428 222 EDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 222 ~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~ 301 (583)
.++.+ .+++|++ |+|+++++.++ +..++.+||+|++++|+|..|...++..|++++.+|+ +++++++|++.++
T Consensus 96 ~~~~~-~~~~i~~--t~g~~~al~~~---~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~ 168 (418)
T 3rq1_A 96 NFRPE-GHIRSIA--TAGGTGGIHHL---IHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSL-FDEHNNFNHEAFQ 168 (418)
T ss_dssp GGCCS-SEEEEEE--ESHHHHHHHHH---HHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECS-BCTTSSBCHHHHH
T ss_pred ccCcc-ccccEEE--CCchHHHHHHH---HHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEee-eCCCCCcCHHHHH
Confidence 55433 2349999 99999999985 4456777999999999999999999999999999998 4445799999999
Q ss_pred HHHHcC--CCCcEEEEeCCC-CCCCCCCCCHHHHHHHHHHHH------hcCeEEEEeccCCCCCCCCCCCchHHHHH-HH
Q psy14428 302 EDIKAM--PERSILFLQTSS-HNPTGVDLSEDQWRQLAVVVK------QRHLYPFFDMAYLGLTSGDFDKDAFSLRY-FA 371 (583)
Q Consensus 302 ~~l~~~--~~~~~~i~i~~p-~NPTG~~~s~~~~~~l~~~a~------~~~i~iI~De~Y~~l~~~~~~~~~~~~~~-~~ 371 (583)
+.+.+. .+.++++++++| |||||.+++.+++++|+++|+ +++++||+||+|.+|.+++ ....++.. +.
T Consensus 169 ~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~--~~~~~~~~~~~ 246 (418)
T 3rq1_A 169 NRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEK--DEVRAFFNKFS 246 (418)
T ss_dssp HHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCH--HHHHGGGGGGT
T ss_pred HHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCCh--HHHHHHHHHHH
Confidence 988532 123448899999 999999999999999999999 8999999999999999764 11222211 11
Q ss_pred HhcCc--EEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhcc----ccCCChHHHHHHHHHhCChhhhhh
Q psy14428 372 KEVGQ--LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGF----YSNPPIHGARIVTEILSDPKLKAQ 445 (583)
Q Consensus 372 ~~~~~--vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~----~~~~s~~~q~~~~~~l~~~~~~~~ 445 (583)
+..++ +|+++||||++|++|+|+||+++.+++ +++++.+....... +++++.++|.++..++++..
T Consensus 247 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---- 318 (418)
T 3rq1_A 247 HLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDD----EEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPA---- 318 (418)
T ss_dssp TCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESS----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHH----
T ss_pred hcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCC----HHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHH----
Confidence 12334 699999999999999999999973324 57888887764432 35688888888888887632
Q ss_pred hhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccc
Q psy14428 446 CDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQ 525 (583)
Q Consensus 446 ~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~ 525 (583)
+.+.|.++++++++++.++++.+.+.|++.+ +.+..++
T Consensus 319 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~ 356 (418)
T 3rq1_A 319 --------------------------------------KFKEYEAERNCYYQLIRDRADIFKQEAAQVG----LPMLPYR 356 (418)
T ss_dssp --------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----CCCCCCC
T ss_pred --------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCCCC
Confidence 2245667778888999999999999998874 5567889
Q ss_pred ccceeecCCC
Q psy14428 526 KGMFCYTGLS 535 (583)
Q Consensus 526 ~g~f~~~~l~ 535 (583)
+|+|.|..+.
T Consensus 357 ~~~~~~~~~~ 366 (418)
T 3rq1_A 357 GGFFITIPTD 366 (418)
T ss_dssp SSSEEEEECT
T ss_pred ceEEEEcCCC
Confidence 9999998663
No 20
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=331.44 Aligned_cols=284 Identities=15% Similarity=0.131 Sum_probs=227.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCC-CCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC----EEEEcCCCChhhHH
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGED-FPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK----TVYFPTPTWNGHVR 273 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~-g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd----~Vlv~~P~y~~~~~ 273 (583)
...|++..|.++||++|++++.+.+ |+++++++|++ |+|+++++.++ +..++.+|| .|+++.|+|+.|..
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~--t~G~~~ai~~~---~~~l~~~gd~~~d~Vlv~~p~y~~~~~ 196 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYL--TTGASDGISTI---LKILVSGGGKSRTGVMIPIPQYPLYSA 196 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEE--ESSHHHHHHHH---HHHHCCCCGGGSEEEEEEESCCTHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEE--cCCHHHHHHHH---HHHHcCCCCCCCCEEEEeCCCchhHHH
Confidence 5689999999999999999998877 48899999999 99999999985 445666665 99999999999999
Q ss_pred HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecc
Q psy14428 274 FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE--RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMA 351 (583)
Q Consensus 274 ~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~--~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~ 351 (583)
.++..|++++.+++.++.++++|++.+++.+..... ++++++++|||||||.+++.+++++|+++|++++++||+||+
T Consensus 197 ~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~ 276 (498)
T 3ihj_A 197 VISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEV 276 (498)
T ss_dssp HHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcC
Confidence 999999999999993333589999999999865322 578888899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHH-------hcCcEEEEecCcccc-cccCccceEEEEEcCCchhHHHHHHHHHHHHhcccc
Q psy14428 352 YLGLTSGDFDKDAFSLRYFAK-------EVGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYS 423 (583)
Q Consensus 352 Y~~l~~~~~~~~~~~~~~~~~-------~~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~ 423 (583)
|.++.|++. ....++..+.. ...++|+++||||+| |++|+|+||+++++.+ +++++.+.+... ...
T Consensus 277 y~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~----~~l~~~l~~~~~-~~~ 350 (498)
T 3ihj_A 277 YQDNVYSPD-CRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLH----PEIKGQLVKLLS-VRL 350 (498)
T ss_dssp TTTCBCCTT-CCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCC----HHHHHHHHHHHH-HSC
T ss_pred ccccccCCC-CCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCC----HHHHHHHHHHHh-ccC
Confidence 999999752 13445555432 234689999999999 8999999999942222 588998887765 667
Q ss_pred CCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHH
Q psy14428 424 NPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIR 503 (583)
Q Consensus 424 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r 503 (583)
+++.+.|.++..+++++. .| ......|.++++++++++.++|
T Consensus 351 ~~~~~~q~a~~~~l~~~~----------------------------~g----------~~~~~~~~~~~~~~~~~l~~~~ 392 (498)
T 3ihj_A 351 CPPVSGQAAMDIVVNPPV----------------------------AG----------EESFEQFSREKESVLGNLAKKA 392 (498)
T ss_dssp CCCHHHHHHHHHHTCCCC----------------------------TT----------STTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCCc----------------------------cC----------cccHHHHHHHHHHHHHHHHHHH
Confidence 889999999988887521 00 0112346666778888999999
Q ss_pred HHHHHHHHhcCCCCCcccccccccceeecCC
Q psy14428 504 EELKSKILDKGSKKNWDHITNQKGMFCYTGL 534 (583)
Q Consensus 504 ~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l 534 (583)
+.+.+.|++. || +.+..+++|+|.|..+
T Consensus 393 ~~l~~~L~~~--~g-~~~~~p~gg~~~~~~l 420 (498)
T 3ihj_A 393 KLTEDLFNQV--PG-IHCNPLQGAMYAFPRI 420 (498)
T ss_dssp HHHHHHHHTS--TT-EECCCCCBSSEECCEE
T ss_pred HHHHHHHhcC--CC-cEecCCCeEEEEEEec
Confidence 9999999885 43 7778899999999754
No 21
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.7e-36 Score=319.74 Aligned_cols=300 Identities=15% Similarity=0.193 Sum_probs=245.2
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCC-eEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNR-LAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~-I~i~~t~G~~ 241 (583)
++.++|+.|.++. + +++.+.+++.+.+... ..+|++..|.++||+++++++.+.+|+.+++++ |++ |+|++
T Consensus 26 ~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~--~~g~~ 97 (389)
T 1gd9_A 26 KDVISLGIGEPDF--D---TPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMV--LLGAN 97 (389)
T ss_dssp SSCEECCCCSCSS--C---CCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEE--ESSTT
T ss_pred cCeEecCCCCCCC--C---CCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEE--cCChH
Confidence 5789999998742 2 4578888888777553 457988899999999999999877777788999 999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ ++ +++.+|++.+++.+ .++++++++++||
T Consensus 98 ~a~~~~---~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l---~~~~~~v~~~~~~ 170 (389)
T 1gd9_A 98 QAFLMG---LSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT-YEEDEFRLNVDELKKYV---TDKTRALIINSPC 170 (389)
T ss_dssp HHHHHH---HTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEEC-CGGGTTCCCHHHHHHHC---CTTEEEEEEESSC
T ss_pred HHHHHH---HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEecc-CCccCCCCCHHHHHHhc---CcCceEEEEECCC
Confidence 999985 4456677999999999999999999999999999998 43 24678999998887 4568888999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+.+..++++++.||||.+|++|+|+||+++
T Consensus 171 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~- 247 (389)
T 1gd9_A 171 NPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDA--RHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAA- 247 (389)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEEC-
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEE-
Confidence 9999999999999999999999999999999999988651 1223333222246899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++.........+++.+.|.++..++++..
T Consensus 248 -~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~--------------------------------------- 282 (389)
T 1gd9_A 248 -P-----SWIIERMVKFQMYNATCPVTFIQYAAAKALKDER--------------------------------------- 282 (389)
T ss_dssp -C-----HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHH---------------------------------------
T ss_pred -C-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCC---------------------------------------
Confidence 6 5899999887777777889999999888887521
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
. .++++++++++.++++.+.+.|++.+ +....+++|+|.|..++.
T Consensus 283 ------~-~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~ 327 (389)
T 1gd9_A 283 ------S-WKAVEEMRKEYDRRRKLVWKRLNEMG----LPTVKPKGAFYIFPRIRD 327 (389)
T ss_dssp ------H-HHHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCCCBTTEECCBCGG
T ss_pred ------c-chHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEeccC
Confidence 0 01355667777888899999998863 455667889999987753
No 22
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=7.7e-36 Score=315.24 Aligned_cols=299 Identities=13% Similarity=0.091 Sum_probs=245.1
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC-CCCC-CeEEEec
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPA-FKDN-RLAIVQG 237 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~-~~~~-~I~i~~t 237 (583)
..+++.|+|+.|.++.. +++.+.+++.+.... ..+|++..|.++||+++++++.+.+|+. ++++ +|++ |
T Consensus 27 ~~g~~~i~l~~~~~~~~-----~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~--t 97 (396)
T 3jtx_A 27 PEGMEAVPLHIGEPKHP-----TPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILP--V 97 (396)
T ss_dssp CTTCCCEECSCCSCCSC-----CCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEE--E
T ss_pred ccCCCeEEeCCcCCCCC-----CCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEE--c
Confidence 45678999999997532 457888888877653 5789999999999999999998888887 8899 9999 9
Q ss_pred CCchhHHHHHHHHHHHhCCCC-----CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcE
Q psy14428 238 ISGSGSLRVGTAFLERFYPGV-----KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSI 312 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~g-----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~ 312 (583)
+|+++++.++ +..++.+| |+|++++|+|..+...++..|++++.+|+ +++++.+|++.+++.+. ++++
T Consensus 98 ~g~~~al~~~---~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d~~~l~~~~~---~~~~ 170 (396)
T 3jtx_A 98 LGSREALFSF---VQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPDWRSISEEVW---KRTK 170 (396)
T ss_dssp SSHHHHHHHH---HHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCCGGGSCHHHH---HTEE
T ss_pred CCcHHHHHHH---HHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccCHHHHHHhhc---cCcE
Confidence 9999999985 44556666 79999999999999999999999999999 66666789999998884 4788
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH---HHhcCcEEEEecCcccccc
Q psy14428 313 LFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF---AKEVGQLCLAQSFSKNMGL 389 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~---~~~~~~vi~i~S~SK~~~l 389 (583)
++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++. .+...+... ....++++++.||||+|++
T Consensus 171 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 249 (396)
T 3jtx_A 171 LVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN-KPLGCLQAAAQLGRSRQKLLMFTSLSKRSNV 249 (396)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC-CCCCHHHHHHHTTCCCTTEEEEEESTTTSSC
T ss_pred EEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCchHHhhhhhcccccCcEEEEeccccccCC
Confidence 999999999999999999999999999999999999999999998752 122222221 1126789999999999999
Q ss_pred cCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCcc
Q psy14428 390 YGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPI 469 (583)
Q Consensus 390 ~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~ 469 (583)
+|+|+||+++ + +++++.+.........+++.+.|.++..++++.
T Consensus 250 ~G~r~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----------------------------- 293 (396)
T 3jtx_A 250 PGLRSGFVAG--D-----AELLKNFLLYRTYHGSAMSIPVQRASIAAWDDE----------------------------- 293 (396)
T ss_dssp GGGCCEEEEE--C-----HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCC-----------------------------
T ss_pred cccceEEEEe--C-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCH-----------------------------
Confidence 9999999998 6 689999998877777889999999888877541
Q ss_pred chhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 470 HGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 470 ~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++++.++++.+.+.|++. +.+..+++|+|.|..++.
T Consensus 294 --------------------~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~~~ 335 (396)
T 3jtx_A 294 --------------------QHVIDNRRLYQEKFERVIPILQQV-----FDVKLPDASFYIWLKVPD 335 (396)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHHTTT-----SCCCCCSSSSEEEEECTT
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHHHhc-----CCccCCCeeEEEEEECCC
Confidence 124455666778888888888764 224567889999988764
No 23
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=3.5e-37 Score=327.08 Aligned_cols=308 Identities=13% Similarity=0.081 Sum_probs=251.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G 239 (583)
.+++.|+|+.|.++.. +++.+.+++.+.+......+|++..|.++||+++++++.+.+|+.+++ ++|++ |+|
T Consensus 21 ~~~~~i~l~~~~~~~~-----~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~--~~g 93 (410)
T 3e2y_A 21 ADPSVVNLGQGFPDIS-----PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILV--AVG 93 (410)
T ss_dssp TSTTSEECSSCCCCSC-----CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEE--ESH
T ss_pred cCCCeEEecCCCCCCC-----CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCC
Confidence 4578899999997522 568899998888765445689999999999999999999888888888 89999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEeccc---------CCCCCCChhhHHHHHHcCCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD---------NKTNGLDFAGMMEDIKAMPER 310 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d---------~~~~g~d~~~l~~~l~~~~~~ 310 (583)
+++++.++ +..++.+||+|++++|+|..+...++..|.+++.+++.. +.++++|++.+++.+ .++
T Consensus 94 ~~~a~~~~---~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~---~~~ 167 (410)
T 3e2y_A 94 AYGSLFNS---IQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKF---SSK 167 (410)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTC---CTT
T ss_pred cHHHHHHH---HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhc---CCC
Confidence 99999985 445677799999999999999999999999999999831 123557888887766 567
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc
Q psy14428 311 SILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY 390 (583)
Q Consensus 311 ~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~ 390 (583)
++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....+++++++||||.+|++
T Consensus 168 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~g~~ 245 (410)
T 3e2y_A 168 TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH--THVKIATLPGMWERTITIGSAGKTFSVT 245 (410)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTTCGGGEEEEEEHHHHSSCG
T ss_pred ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC--CCCCHHHcCCccCeEEEEecchhhcCCC
Confidence 89999999999999999999999999999999999999999999998762 3334444333457899999999999999
Q ss_pred CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccc
Q psy14428 391 GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIH 470 (583)
Q Consensus 391 GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~ 470 (583)
|+|+||+++ + +++++.+........++++.+.|.++..++++....
T Consensus 246 G~r~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~--------------------------- 291 (410)
T 3e2y_A 246 GWKLGWSIG--P-----AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKR--------------------------- 291 (410)
T ss_dssp GGCCEEEEC--C-----HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTT---------------------------
T ss_pred CceEEEEEE--C-----HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhcc---------------------------
Confidence 999999999 7 589999988887778889999999998887531000
Q ss_pred hhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 471 GARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 471 g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
...+.++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..+.
T Consensus 292 --------------~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~ 338 (410)
T 3e2y_A 292 --------------MDDPECYFNSLPKELEVKRDRMVRLLNSVG----LKPIVPDGGYFIIADVS 338 (410)
T ss_dssp --------------TTSTTSHHHHHHHHHHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEECG
T ss_pred --------------ccchHHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCccEEEEEEch
Confidence 000112356677788899999999998864 55677899999987654
No 24
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-36 Score=325.35 Aligned_cols=309 Identities=16% Similarity=0.188 Sum_probs=243.5
Q ss_pred CCccccCCccc-cCCCCCCCCChHH--HHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCC---eEEEe
Q psy14428 163 PKKMNLGVGAY-RGEDGKPYVLPSV--KEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNR---LAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~-~~~~~~p~~~~~v--~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~---I~i~~ 236 (583)
++.+||+.|.+ +. +. ++.+ .+++.+.+......+|++..|.++||+++|+++.+.+ +.+++++ |++
T Consensus 47 ~~~i~l~~g~~~~~--~~---~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~-- 118 (430)
T 2x5f_A 47 STTYNATIGMATNK--DG---KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIV-- 118 (430)
T ss_dssp TCSEECCCSSCEET--TE---ECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEE--
T ss_pred CCcEEeeeeeccCC--CC---chhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEE--
Confidence 56899999998 53 22 2223 4443333222135689999999999999999997764 6778889 999
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFL 315 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~ 315 (583)
|+|+++|+.++ +..++.+||+|++++|+|..+...++. .|++++.+|+ +++++++|++.+++.+.....++++++
T Consensus 119 t~g~~~al~~~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~ 194 (430)
T 2x5f_A 119 TNALTHGLSLV---GDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPI-FDKDGHYTTDSLVEALQSYNKDKVIMI 194 (430)
T ss_dssp ESHHHHHHHHH---HHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECC-BCTTSCBCSHHHHHHHHHCCSSEEEEE
T ss_pred cCCchHHHHHH---HHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEec-cCccCCcCHHHHHHHHHhcCCCCEEEE
Confidence 99999999985 445667799999999999999999999 9999999998 543378999999999865444788999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHh-----cCeEEEEeccCCCCCCCCCCCchHHHH-HHHHhcCc---EEEEecCccc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQ-----RHLYPFFDMAYLGLTSGDFDKDAFSLR-YFAKEVGQ---LCLAQSFSKN 386 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~-----~~i~iI~De~Y~~l~~~~~~~~~~~~~-~~~~~~~~---vi~i~S~SK~ 386 (583)
+++||||||.+++.+++++|+++|++ +|++||+||+|.++.+++ ....++. .+.+..++ +|+++||||.
T Consensus 195 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 272 (430)
T 2x5f_A 195 LNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYED--VYTQSLFTALTNLHSNAILPIRLDGATKE 272 (430)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSS--SCCSCHHHHHHTTCCTTEEEEEEEEHHHH
T ss_pred EcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCc--ccchHHHHHHhhccCCcceEEEEEecccC
Confidence 99999999999999999999999999 999999999999999875 2233444 54333578 9999999999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHHHHhc----cccCCChHHHHHHHHHhC-ChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKILIRG----FYSNPPIHGARIVTEILS-DPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~----~~~~~s~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
||++|+|+||+++.+++ +++++++...... ...++|.+.|.++..+++ +.
T Consensus 273 ~~~~G~riG~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--------------------- 327 (430)
T 2x5f_A 273 FFAWGFRVGFMTFGTSD----QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK--------------------- 327 (430)
T ss_dssp TTCGGGCCEEEEEBCCC----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH---------------------
T ss_pred CCCCCCCeEEEEEecCC----HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh---------------------
Confidence 99999999999983223 4788888876655 667889999999888886 52
Q ss_pred hccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 462 GFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 462 ~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.|.++++++++++.++|+.+.+.|++...+-++....+++|+|.|..++
T Consensus 328 -------------------------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~ 376 (430)
T 2x5f_A 328 -------------------------QFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH 376 (430)
T ss_dssp -------------------------HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEES
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCC
Confidence 2444566677888899999999998431111256667889999998765
No 25
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-36 Score=322.28 Aligned_cols=298 Identities=13% Similarity=0.088 Sum_probs=240.8
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G~ 240 (583)
+.+.|||+.|.++. + +++.+.+++.+.+......+|++..|.++||+++++++.+.+|+++++ ++|++ |+|+
T Consensus 46 g~~~idl~~g~~~~--~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~--t~G~ 118 (404)
T 2o1b_A 46 PLPLINMAVGIPDG--P---TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCI--LYGT 118 (404)
T ss_dssp SSCCEECCCCSCSS--C---CCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEE--ESSH
T ss_pred CCCEEecCCcCCCC--C---CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEE--cCCc
Confidence 34579999999842 2 457888888877644224579888899999999999998777787887 89999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ +++++.+|++.+++.+. ++++++++++||
T Consensus 119 ~~al~~~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~ 191 (404)
T 2o1b_A 119 KNGLVAV---PTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNL-EPPHYLPDWSKVDSQII---DKTKLIYLTYPN 191 (404)
T ss_dssp HHHHHHH---HHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEEC-CTTTCCCCGGGSCHHHH---HHEEEEEECSSC
T ss_pred HHHHHHH---HHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEecc-CcccCcCCHHHHHHhhc---cCceEEEEcCCC
Confidence 9999985 4456677999999999999999999999999999998 54445688999988884 467888899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|+++|++||+||+|.++.+++. +.++..+.+..++++++.||||.+|++|+|+||+++
T Consensus 192 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~- 267 (404)
T 2o1b_A 192 NPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK---NPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG- 267 (404)
T ss_dssp TTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC---CCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE-
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCCCCCCEEEEEecchhccCchhheEeEec-
Confidence 9999999999999999999999999999999999988641 112222212235799999999999999999999998
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++.........+++.+.|.++..++++.
T Consensus 268 -~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---------------------------------------- 301 (404)
T 2o1b_A 268 -N-----KDMIQALKKYQTHTNAGMFGALQDAAIYALNHY---------------------------------------- 301 (404)
T ss_dssp -C-----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC----------------------------------------
T ss_pred -C-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC----------------------------------------
Confidence 6 589999988777667788999998887776431
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.++++++++++.++++.+.+.|++.+ +....+++|+|.|..++
T Consensus 302 --------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~ 344 (404)
T 2o1b_A 302 --------DDFLEEQSNVFKTRRDRFEAMLAKAD----LPFVHAKGGIYVWLETP 344 (404)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHTT----CCEECCCBSSEEEEECC
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHhcC----CeecCCCcceEEEEeCC
Confidence 01245566677888888999998863 45566788999998775
No 26
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=4.1e-36 Score=315.09 Aligned_cols=307 Identities=13% Similarity=0.054 Sum_probs=236.2
Q ss_pred ccccchhhHhhcccccc-CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhC
Q psy14428 143 MMEDIKPLKQQLKGFNK-DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYG 221 (583)
Q Consensus 143 m~~~~~~i~~l~~~~~~-~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~ 221 (583)
|.-+++++..+...++. ..+.+.|||+.|.++.. +++.+.+++.+... ...+|++..|.++||+++++++.+
T Consensus 2 m~~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~-----~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~ 74 (376)
T 3ezs_A 2 MTFEPYPFERLRALLKEITPKKRGLDLGIGEPQFE-----TPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKR 74 (376)
T ss_dssp CCCCCCHHHHHHHHHTTCCCSSCCCBCSSCCCCSC-----CCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHhhhccCCEEEeCCCCCCCC-----CCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHH
Confidence 43344455554433321 12238899999997522 45788888877663 256799999999999999999988
Q ss_pred CCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCC--CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhh
Q psy14428 222 EDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG--VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAG 299 (583)
Q Consensus 222 ~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~ 299 (583)
.+|+.+++++|++ |+|+++++.++ +..+..+ ||+|++++|+|..+...++..|++++.+|+ +++ .++++ .
T Consensus 75 ~~g~~~~~~~i~~--t~g~~~al~~~---~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~-~ 146 (376)
T 3ezs_A 75 RFKIELKENELIS--TLGSREVLFNF---PSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPL-TKE-NDFTP-S 146 (376)
T ss_dssp HHSCCCCGGGEEE--ESSSHHHHHHH---HHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEEC-CGG-GTSCC-C
T ss_pred HhCCCCCHHHEEE--CcCcHHHHHHH---HHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEccc-CCC-CCcch-h
Confidence 7788889999999 99999999985 4556788 999999999999999999999999999998 433 34555 5
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH-----hc
Q psy14428 300 MMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK-----EV 374 (583)
Q Consensus 300 l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~-----~~ 374 (583)
+++.+. ++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ...++....+ ..
T Consensus 147 l~~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~~~ 220 (376)
T 3ezs_A 147 LNEKEL---QEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT---PPPSLLEACMLAGNEAF 220 (376)
T ss_dssp CCHHHH---HHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS---CCCCHHHHHHHTTCTTC
T ss_pred HHhhhc---cCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC---CCCCHHHcccccccccc
Confidence 555553 356788889999999999999999999999999999999999999999875 2223333333 56
Q ss_pred CcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChh-hhhhhhhHHHHH
Q psy14428 375 GQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK-LKAQCDETERIM 453 (583)
Q Consensus 375 ~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~ 453 (583)
+++++++||||.+|++|+|+||+++ + +++++.+.........+.+.+.|.++..++++.. +++..+..++..
T Consensus 221 ~~~i~~~s~sK~~g~~G~r~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 293 (376)
T 3ezs_A 221 KNVLVIHSLSKRSSAPGLRSGFIAG--D-----SRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNL 293 (376)
T ss_dssp TTEEEEEESTTTTTCGGGCCEEEEE--C-----HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHH
T ss_pred CcEEEEecchhccCCccceeEEEee--C-----HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 8999999999999999999999998 6 6899999988877788899999999999887633 222222222333
Q ss_pred HHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 454 SQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 454 ~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+.+.+.++ .+. .|..|.|+|..+.
T Consensus 294 ~~l~~~l~-~~~-~~~~~~~~~~~~~ 317 (376)
T 3ezs_A 294 KLARKIFK-NTL-IYPYSFYVYLPVQ 317 (376)
T ss_dssp HHHHHHST-TCC-CCSBSSEEEEECS
T ss_pred HHHHHHhc-CCC-CCCcceEEEEECC
Confidence 33333333 344 6778888887765
No 27
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.1e-36 Score=324.53 Aligned_cols=307 Identities=16% Similarity=0.125 Sum_probs=251.5
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G 239 (583)
.++.|+|+.|.++. .+++.+.+++.+.+.... ..+|++..|.++||+++++++.+.+|+.+++ ++|++ |+|
T Consensus 27 ~~~~i~l~~g~~~~-----~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~--~~g 99 (422)
T 3fvs_A 27 EHDVVNLGQGFPDF-----PPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLV--TVG 99 (422)
T ss_dssp TSCCEECCCSSCSS-----CCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEE--ESH
T ss_pred cCCceEeCCCCCCC-----CCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEE--ECC
Confidence 45889999999753 256888898888776532 4689999999999999999999888888888 79999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-----------CCCCCChhhHHHHHHcCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-----------KTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-----------~~~g~d~~~l~~~l~~~~ 308 (583)
+++++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ ++ .++.+|++.+++.+ .
T Consensus 100 ~~~a~~~~---~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~G~~~~~~~~~~d~~~l~~~~---~ 172 (422)
T 3fvs_A 100 GYGALFTA---FQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL-KPGPIQNGELGSSSNWQLDPMELAGKF---T 172 (422)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-BCCCCCSSSCCBGGGSBCCHHHHHTTC---C
T ss_pred hHHHHHHH---HHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEec-ccccccccccccccCCCCCHHHHHhhc---C
Confidence 99999985 4455677999999999999999999999999999998 43 23457888887766 5
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 309 ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....+++++++||||.+|
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~g 250 (422)
T 3fvs_A 173 SRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH--QHISIASLPGMWERTLTIGSAGKTFS 250 (422)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTTTGGGEEEEEEHHHHHT
T ss_pred CCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC--CCCChhhcccccCcEEEEecchhccC
Confidence 6789999999999999999999999999999999999999999999998762 33344443334578999999999999
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCc
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPP 468 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p 468 (583)
++|+|+||+++ + +++++.+.........+++.+.|.++..++++.....
T Consensus 251 ~~G~r~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~------------------------ 299 (422)
T 3fvs_A 251 ATGWKVGWVLG--P-----DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLF------------------------ 299 (422)
T ss_dssp CGGGCCEEEEC--C-----HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTT------------------------
T ss_pred CccceEEEEEe--C-----HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccc------------------------
Confidence 99999999999 7 5899999888777788889999999888875311000
Q ss_pred cchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 469 IHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 469 ~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..+.++++++++++.++|+.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 300 -----------------~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~ 346 (422)
T 3fvs_A 300 -----------------RQPSSYFVQFPQAMQRCRDHMIRSLQSVG----LKPIIPQGSYFLITDISD 346 (422)
T ss_dssp -----------------TCTTCHHHHHHHHHHHHHHHHHHHHHTTT----CEEEBCSBSSEEEEECHH
T ss_pred -----------------cchHHHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCeeeEEEEechh
Confidence 00112356677788899999999998864 556778999999987754
No 28
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.3e-36 Score=323.00 Aligned_cols=307 Identities=15% Similarity=0.206 Sum_probs=246.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCC-CCCCCeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPA-FKDNRLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~-~~~~~I~i~~t 237 (583)
..++.|||+.|.++.. .++++.+.+++.+.++.. ...+|++..|.++||+++|+++.+.+|++ +++++|++ |
T Consensus 41 ~~~~~idl~~g~~~~~---~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~--t 115 (425)
T 1vp4_A 41 ADKDAISFGGGVPDPE---TFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIF--T 115 (425)
T ss_dssp TSTTCEECCCCSCCGG---GSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEE--E
T ss_pred cCCCceeCCCCCCCcc---cCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEE--e
Confidence 3567899999987532 224578888887776542 13679999999999999999997655776 78899999 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-----CCCcE
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-----PERSI 312 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-----~~~~~ 312 (583)
+|+++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ +++ ++|++.+++.++.. ..+++
T Consensus 116 ~G~~~al~~~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~--~~d~~~l~~~l~~~~~~~~~~~~~ 189 (425)
T 1vp4_A 116 VGSQQALDLI---GKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPL-EDD--GMDLNVLERKLSEFDKNGKIKQVK 189 (425)
T ss_dssp EHHHHHHHHH---HHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEE-ETT--EECHHHHHHHHHHHHHTTCGGGEE
T ss_pred ccHHHHHHHH---HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEecc-CCC--CCCHHHHHHHHHhhhhcccCCCce
Confidence 9999999985 4456677999999999999999999999999999998 553 68999999888541 12567
Q ss_pred EE-EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC
Q psy14428 313 LF-LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG 391 (583)
Q Consensus 313 ~i-~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G 391 (583)
++ ++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ....++..+ +..+++|+++||||.++ +|
T Consensus 190 ~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~-~~~~~~i~~~s~sK~~~-~G 265 (425)
T 1vp4_A 190 FIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG--ETVDPIFKI-GGPERVVLLNTFSKVLA-PG 265 (425)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSS--CCCCCHHHH-HCTTTEEEEEESTTTTC-GG
T ss_pred EEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC--CCCcCHHHh-CCCCCEEEEeccccccc-cc
Confidence 76 689999999999999999999999999999999999999998865 233455554 44578999999999999 99
Q ss_pred ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccch
Q psy14428 392 ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHG 471 (583)
Q Consensus 392 lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g 471 (583)
+|+||+++ + +++++.+.........++|.++|.++..++++..
T Consensus 266 ~r~G~~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~------------------------------ 308 (425)
T 1vp4_A 266 LRIGMVAG--S-----KEFIRKIVQAKQSADLCSPAITHRLAARYLERYD------------------------------ 308 (425)
T ss_dssp GCEEEEEC--C-----HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSC------------------------------
T ss_pred cceEEEee--C-----HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCC------------------------------
Confidence 99999999 6 5789988887766667789999998888775421
Q ss_pred hhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcccccccccceeecCCCh
Q psy14428 472 ARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKK--NWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 472 ~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg--~~~~~~~~~g~f~~~~l~~ 536 (583)
+.++++++++++.++++.+.+.|++.. |+ ++....+++|+|.|..++.
T Consensus 309 ----------------~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~g~~~~~~~~g~~~~~~~~~ 358 (425)
T 1vp4_A 309 ----------------LLEQLKPTIELYRRKRTVMLNALEEYF-SDIPGVKWVKSEGGLFIWLTLPE 358 (425)
T ss_dssp ----------------HHHHTHHHHHHHHHHHHHHHHHHHHHS-TTSTTCEECCCSBSSEEEEECCT
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCceEEecCCccEEEEEEcCC
Confidence 123355667777888888999888753 32 3556668889999987753
No 29
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=5.2e-36 Score=315.76 Aligned_cols=298 Identities=13% Similarity=0.121 Sum_probs=243.4
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~~ 241 (583)
++.|+|+.|.++. + +++.+.+++.+..... ..+|++..|.++||+++++++.+.+|..++++ +|++ |+|++
T Consensus 30 ~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~--~~g~~ 101 (386)
T 1u08_A 30 HQAINLSQGFPDF--D---GPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITV--TAGAT 101 (386)
T ss_dssp TTCEECCCSSCSS--C---CCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEE--ESSHH
T ss_pred CCeEEecCCCCCC--C---CCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--cCChH
Confidence 4679999998742 2 4578888888777543 46798889999999999999987777778898 9999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ +++++++|++.+++.+ .++++++++++|||
T Consensus 102 ~a~~~~---~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l---~~~~~~v~l~~p~n 174 (386)
T 1u08_A 102 EALYAA---ITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMAL-QPPHFRVDWQEFAALL---SERTRLVILNTPHN 174 (386)
T ss_dssp HHHHHH---HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-CTTTCCCCHHHHHHHC---CTTEEEEEEESSCT
T ss_pred HHHHHH---HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeec-CcccCcCCHHHHHHhh---cccCEEEEEeCCCC
Confidence 999985 4445677999999999999999999999999999998 5545789999998887 46788999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....++++++.||||.+|++|+|+||+++
T Consensus 175 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-- 250 (386)
T 1u08_A 175 PSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQ--GHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA-- 250 (386)
T ss_dssp TTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSS--CCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEEC--
T ss_pred CCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCC--CCcChhcccCccCcEEEEecchhhcCCcccceEEEEc--
Confidence 999999999999999999999999999999999988652 2223333222357899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~ 481 (583)
+ +++++++.........+++.+.|.++..++++.
T Consensus 251 ~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----------------------------------------- 284 (386)
T 1u08_A 251 P-----APISAEIRKVHQYLTFSVNTPAQLALADMLRAE----------------------------------------- 284 (386)
T ss_dssp C-----HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-----------------------------------------
T ss_pred C-----HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC-----------------------------------------
Confidence 7 578898888776666778888888887776431
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 482 PKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++++.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 285 -------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~ 328 (386)
T 1u08_A 285 -------PEHYLALPDFYRQKRDILVNALNESR----LEILPCEGTYFLLVDYSA 328 (386)
T ss_dssp -------THHHHTHHHHHHHHHHHHHHHTTSSS----CEECCCCBSSEEEEECTT
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHCC----CeecCCCceEEEEEecCC
Confidence 01244566677888899999888753 555667889999987754
No 30
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-36 Score=317.63 Aligned_cols=298 Identities=15% Similarity=0.085 Sum_probs=240.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
.+.+.|||+.|.++ .+ +++.+.+++.+.+......+|++..|..+||+++++++.+.+|++++++ +|++ |+|
T Consensus 23 ~g~~~idl~~~~~~--~~---~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~--~~g 95 (376)
T 2dou_A 23 RGVGLIDLSIGSTD--LP---PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALA--LIG 95 (376)
T ss_dssp TTCCCEECSSCCCC--CC---CCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEE--ESS
T ss_pred cCCCEEeccCCCCC--CC---CCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEE--cCC
Confidence 45678999999874 22 4578888888877543356788878999999999999987777877887 9999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ + +++.+|++.+++.+. ++++++++++|
T Consensus 96 ~~~a~~~~---~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~-~~~~~d~~~l~~~l~---~~~~~v~l~~p 167 (376)
T 2dou_A 96 SQEGLAHL---LLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL-R-EDGLADLKAVPEGVW---REAKVLLLNYP 167 (376)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB-C-TTSSBCGGGSCHHHH---HHEEEEEECSS
T ss_pred cHHHHHHH---HHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC-C-CCCCCCHHHHHHhhc---cCceEEEECCC
Confidence 99999985 4456677999999999999999999999999999998 3 345678999988883 46788999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++..+.+..+++++++||||.+|++|+|+||+++
T Consensus 168 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 244 (376)
T 2dou_A 168 NNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE---APSPLALPGAKERVVELFSLSKSYNLAGFRLGFALG 244 (376)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC---CCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEE
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCCCCCcEEEEecchhhcCChhheeEEEec
Confidence 99999999999999999999999999999999999987641 112222223356899999999999999999999998
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++++.........+.+.+.|.++..++++. +
T Consensus 245 --~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~--~------------------------------------ 279 (376)
T 2dou_A 245 --S-----EEALARLERVKGVIDFNQYAGVLRMGVEALKTP--K------------------------------------ 279 (376)
T ss_dssp --C-----HHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC--H------------------------------------
T ss_pred --C-----HHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc--H------------------------------------
Confidence 6 589999988777666778999999888888651 0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++++.++++.+.+.|++. +....+++|+|.|..++.
T Consensus 280 ----------~~~~~~~~~~~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~ 321 (376)
T 2dou_A 280 ----------EVVRGYARVYRERALGMAEALKGV-----LSLLPPRATMYLWGRLPE 321 (376)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHTTT-----SEECCCCBSSEEEEECCT
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHh-----cCccCCCeeEEEEEECCC
Confidence 124455666778888888888764 344567789999987753
No 31
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=3.9e-36 Score=317.22 Aligned_cols=293 Identities=16% Similarity=0.117 Sum_probs=233.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.|||+.|.++.. +++.+.+++.+.+.+. ..+|++..|.++||+++++++.+.+|+.+++++|++ |+|+
T Consensus 29 ~g~~~i~l~~g~~~~~-----~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~--t~g~ 100 (391)
T 3h14_A 29 AGRRIIHMEVGQPGTG-----APRGAVEALAKSLETD-ALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVI--TPGS 100 (391)
T ss_dssp TTCCCEECCCSSCSSC-----SCHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESSH
T ss_pred cCCCeEEccCCCCCCC-----CCHHHHHHHHHHHhcC-CCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEE--ecCh
Confidence 4678899999997532 4578888888877653 468999999999999999999988888899999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++|+.++ +..++.+||+|++++|+|..+...++..|++++.+|+ +++ ++.+|++.+++. +++++++++|
T Consensus 101 ~~al~~~---~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~------~~~~v~i~~p 170 (391)
T 3h14_A 101 SGGFLLA---FTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPT-APENRLQPVPADFAGL------DLAGLMVASP 170 (391)
T ss_dssp HHHHHHH---HHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CGGGTTSCCHHHHTTS------CCSEEEEESS
T ss_pred HHHHHHH---HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeec-CcccCCCCCHHHHHhc------CCeEEEECCC
Confidence 9999985 4556677999999999999999999999999999998 433 356788777542 6788889999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..+.. +..+++++++||||.+|++|+|+||+++
T Consensus 171 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~~~---~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 244 (391)
T 3h14_A 171 ANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK---AVTAL---ELTDECYVINSFSKYFSMTGWRVGWMVV 244 (391)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC---CCCGG---GTCSSSEEEEESSSTTCCTTSCCEEEEC
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC---CcChh---hcCCCEEEEEechhccCCccceeEEEEe
Confidence 99999999999999999999999999999999999998762 12221 2257899999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
+ +++++.+.........+++.+.|.++...++..
T Consensus 245 --~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--------------------------------------- 278 (391)
T 3h14_A 245 --P-----EDQVRVVERIAQNMFICAPHASQVAALAALDCD--------------------------------------- 278 (391)
T ss_dssp --C-----GGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCH---------------------------------------
T ss_pred --C-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHhCCh---------------------------------------
Confidence 6 468888888887778889999999888777631
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+.++++++++.++|+.+.+.|++.+. .....+++++|.|..++.
T Consensus 279 ----------~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~ 322 (391)
T 3h14_A 279 ----------AELQANLDVYKANRKLMLERLPKAGF---TRIAPPDGAFYVYADVSD 322 (391)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHTC---CCBCCCCBTTEEEEECTT
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHcCC---CcccCCCeeEEEEEecCc
Confidence 12445566677888888888887642 223567888999986653
No 32
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=8e-36 Score=315.47 Aligned_cols=295 Identities=16% Similarity=0.209 Sum_probs=230.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC---CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL---DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~---~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.++.|||+.|.++.. +++.+.+++.+.+.... ..+|++..|.++||+++++++.+.+|+.+++++|++ |+
T Consensus 34 ~~~~i~l~~~~~~~~-----~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~--~~ 106 (398)
T 3ele_A 34 KENVYDFSIGNPSIP-----APQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYM--TM 106 (398)
T ss_dssp GGGCEECCSCCCCSC-----CCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ES
T ss_pred CCCeEEeecCCCCCC-----CCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEE--cc
Confidence 457899999976522 56888888887775421 467999999999999999999988888899999999 99
Q ss_pred CchhHHHHHHHHHHHhCCCC-CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeC
Q psy14428 239 SGSGSLRVGTAFLERFYPGV-KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQT 317 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~ 317 (583)
|+++++.++ +..++.+| |+|++++|+|..+...++..|++++.+|+ +++++++|++.+++.+ .+++++++++
T Consensus 107 g~~~al~~~---~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l---~~~~~~v~~~ 179 (398)
T 3ele_A 107 GAAASLSIC---FRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPA-DTEHFQIDFDALEERI---NAHTRGVIIN 179 (398)
T ss_dssp SHHHHHHHH---HHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECC-CTTTSSCCHHHHHHTC---CTTEEEEEEC
T ss_pred CHHHHHHHH---HHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CCcCCcCCHHHHHHHh---CcCCCEEEEc
Confidence 999999985 45567779 99999999999999999999999999999 6556799999998877 5678999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHh------cCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQ------RHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG 391 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~------~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G 391 (583)
+||||||.+++.+++++|+++|++ +|++||+||+|.+|.+++. ..+.. .+..+++++++||||.+|++|
T Consensus 180 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~--~~~~~---~~~~~~~i~~~s~sK~~~~~G 254 (398)
T 3ele_A 180 SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGI--KVPFV---TKYYDNTLVCYSYSKSLSLPG 254 (398)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTC--CCCCG---GGTCSSEEEEEESTTTSSCTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCC--CcCCh---HhhcCCeEEEEehhhcCCCcc
Confidence 999999999999999999999999 9999999999999998752 22222 234578999999999999999
Q ss_pred ccceEEEEEcCCch-hHHHHHHHHHHHHhcc-ccCCChHHHHHHHHHhCChhhhhhhhhHHH-HHHHHHHHHhhccC-CC
Q psy14428 392 ERVGTFSVLTPTSD-ETERIMSQLKILIRGF-YSNPPIHGARIVTEILSDPKLKAQCDETER-IMSQLKILIRGFYS-NP 467 (583)
Q Consensus 392 lRiG~lv~~~p~~~-~~~~li~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~l~~~~r~~~~-~~ 467 (583)
+|+||+++ +++. ....+++.+....... ..+++.+.|.++..++++....++..+.+. +.+.++.+ .+. ..
T Consensus 255 ~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~ 329 (398)
T 3ele_A 255 ERIGYVLV--PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATGDINAYKENRDLLYEGLTRI---GYHCFK 329 (398)
T ss_dssp TCCEEEEC--CTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCCCHHHHHHHHHHHHHHHHHH---TCCEEC
T ss_pred ceeEEEEE--cchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc---CCeecC
Confidence 99999999 6421 0012455555544433 567888999999999887553333333222 22223222 334 45
Q ss_pred ccchhhHHHHhcC
Q psy14428 468 PIHGARIVTEILS 480 (583)
Q Consensus 468 p~~g~~i~~~~l~ 480 (583)
|.++.++|..+..
T Consensus 330 ~~~~~~~~~~~~~ 342 (398)
T 3ele_A 330 PDGAFYMFVKALE 342 (398)
T ss_dssp CSBSSEEEEECSS
T ss_pred CCeeEEEEEEcCC
Confidence 5666668876653
No 33
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=2e-36 Score=323.63 Aligned_cols=304 Identities=13% Similarity=0.068 Sum_probs=235.0
Q ss_pred CCCCccccCCccccCCCCCCCC-ChHHHHHH--HHHhcc--CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYV-LPSVKEAE--RRIYEK--NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~-~~~v~~a~--~~~~~~--~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
..+..|||+.|.|+.+ .++ .+.+.++. .+.+.+ ....+|++..|.++||++||+++. +++++|++
T Consensus 31 ~~~~~i~~~~G~p~~~---~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~------~~~~~i~~- 100 (427)
T 3ppl_A 31 SKNLKLDLTRGKPSSE---QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLG------VPVEQVLA- 100 (427)
T ss_dssp HTCCCEECCCCSCCHH---HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHT------SCGGGEEE-
T ss_pred cCCceEecCCCCCChH---HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhC------CCcceEEE-
Confidence 3456899999998743 111 22455554 444433 235789999999999999999993 67899999
Q ss_pred ecCCchhHHH--HHHHHHHHhCC--C----------CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHH
Q psy14428 236 QGISGSGSLR--VGTAFLERFYP--G----------VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 236 ~t~G~~~al~--l~~~~l~~~~~--~----------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~ 301 (583)
|+|+++++. ++. ..+.. + ||+|++++|+|..+...++..|++++.+|+ ++ .++|++.++
T Consensus 101 -t~G~~~al~~~~~~---~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~-~~--~g~d~~~l~ 173 (427)
T 3ppl_A 101 -GDASSLNIMFDVIS---WSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPM-NE--DGPDMDAVE 173 (427)
T ss_dssp -CSSCHHHHHHHHHH---HHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEE-ET--TEECHHHHH
T ss_pred -eCCcHHHHHHHHHH---HHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCC-CC--CCCCHHHHH
Confidence 999999994 543 23333 3 899999999999999999999999999999 55 369999998
Q ss_pred HHHHcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHH-HhcCeEEEEeccCCCCCCCCCCCchHHHHHHH---HhcCc
Q psy14428 302 EDIKAMPERSILFL-QTSSHNPTGVDLSEDQWRQLAVVV-KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA---KEVGQ 376 (583)
Q Consensus 302 ~~l~~~~~~~~~i~-i~~p~NPTG~~~s~~~~~~l~~~a-~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~---~~~~~ 376 (583)
+.+. .+++++++ +|+||||||.+++.+++++|+++| +++|++||+||+|.++.|++....+.++..+. +..++
T Consensus 174 ~~l~--~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
T 3ppl_A 174 ELVK--NPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNR 251 (427)
T ss_dssp HHTT--STTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTS
T ss_pred HHHh--cCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCc
Confidence 8872 24666665 569999999999999999999999 99999999999999988765211222444432 35679
Q ss_pred EEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC-hhhhhhhhhHHHHHHH
Q psy14428 377 LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD-PKLKAQCDETERIMSQ 455 (583)
Q Consensus 377 vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~ 455 (583)
+|+++||||+ ++||+|+||+++ + +++++.+.........+++.+.|.+++.++++ +.
T Consensus 252 ~i~~~S~SK~-~~~G~r~G~~~~--~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-------------- 309 (427)
T 3ppl_A 252 FWAFTSTSKI-TLAGAGVSFFLT--S-----AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEG-------------- 309 (427)
T ss_dssp EEEEEESTTT-SCTTSSCEEEEC--C-----HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHH--------------
T ss_pred EEEEechhhc-cCcCccEEEEEc--C-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhh--------------
Confidence 9999999999 679999999999 7 58999999988888889999999999999886 22
Q ss_pred HHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCcccccccccceeecCC
Q psy14428 456 LKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGS-KKNWDHITNQKGMFCYTGL 534 (583)
Q Consensus 456 l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~-pg~~~~~~~~~g~f~~~~l 534 (583)
|.++++++++.+.++|+.+.+.|++... -+.+.+..+++|+|.|..+
T Consensus 310 --------------------------------~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~ 357 (427)
T 3ppl_A 310 --------------------------------VRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDV 357 (427)
T ss_dssp --------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEEC
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEEC
Confidence 2334556666677777777777765210 0135556788999999888
Q ss_pred Chh
Q psy14428 535 SAS 537 (583)
Q Consensus 535 ~~~ 537 (583)
+..
T Consensus 358 ~~~ 360 (427)
T 3ppl_A 358 VPG 360 (427)
T ss_dssp STT
T ss_pred Ccc
Confidence 653
No 34
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.9e-36 Score=324.31 Aligned_cols=305 Identities=13% Similarity=0.102 Sum_probs=245.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.|+|+.|.++. + +++.+.+++.+.+......+|++..|.++||++++++++..+|+.+++++|++ |+|+
T Consensus 42 ~g~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~--t~g~ 114 (437)
T 3g0t_A 42 TGTKFCRMEMGVPGL--P---APQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVP--TVGS 114 (437)
T ss_dssp HTCCCEECCCCSCCS--C---CCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESHH
T ss_pred cCCCEEeccCcCCCC--C---CCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEE--eCCH
Confidence 356889999999742 2 56888888887776433378999999999999999999988889999999999 9999
Q ss_pred hhHHHHHHHHHHHhC--CCCC--EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEe
Q psy14428 241 SGSLRVGTAFLERFY--PGVK--TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQ 316 (583)
Q Consensus 241 ~~al~l~~~~l~~~~--~~gd--~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i 316 (583)
++++.++ +..+. .+|| +|++++|+|..+...++..|++++.+|+ +++++.+|++.+++.++ .++++++++
T Consensus 115 t~al~~~---~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l~--~~~~~~v~l 188 (437)
T 3g0t_A 115 MQGCFVS---FLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDL-FEYRGEKLREKLESYLQ--TGQFCSIIY 188 (437)
T ss_dssp HHHHHHH---HHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEG-GGGCTTHHHHHHHHHHT--TTCCCEEEE
T ss_pred HHHHHHH---HHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEee-cCCCCccCHHHHHHHHh--cCCceEEEE
Confidence 9999985 44565 6799 9999999999999999999999999999 55556689999999884 356788889
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCch---HHH-HHHHHhcCcEEEEecCcccccccCc
Q psy14428 317 TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDA---FSL-RYFAKEVGQLCLAQSFSKNMGLYGE 392 (583)
Q Consensus 317 ~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~---~~~-~~~~~~~~~vi~i~S~SK~~~l~Gl 392 (583)
++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .+. +++ ..+.+..++++++.||||.++++|+
T Consensus 189 ~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 267 (437)
T 3g0t_A 189 SNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD-YSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQ 267 (437)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC-CCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGG
T ss_pred eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC-cCcccccchhhccCCCCCcEEEEEcCccCCCCccc
Confidence 99999999999999999999999999999999999999988641 111 011 2333346899999999999999999
Q ss_pred cceEEEEEcCCchhHHHHHH-H-----------------HHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHH
Q psy14428 393 RVGTFSVLTPTSDETERIMS-Q-----------------LKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMS 454 (583)
Q Consensus 393 RiG~lv~~~p~~~~~~~li~-~-----------------l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 454 (583)
|+||+++ + +++++ . +.........+++.+.|.++..++++..
T Consensus 268 r~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------------- 327 (437)
T 3g0t_A 268 RIGVLMI--S-----GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACN------------- 327 (437)
T ss_dssp CCEEEEE--C-----HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHH-------------
T ss_pred eeEEEEE--C-----HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcH-------------
Confidence 9999999 7 57888 7 6666666667888888888877775321
Q ss_pred HHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc------cc-ccc
Q psy14428 455 QLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHI------TN-QKG 527 (583)
Q Consensus 455 ~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~------~~-~~g 527 (583)
.|.++++++++++.++++.+.+.|++.+ +... .+ ++|
T Consensus 328 --------------------------------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~ 371 (437)
T 3g0t_A 328 --------------------------------DGEYNFRDSVIEYGRKARIMKKMFLDNG----FNIVYDKDGNEPLADG 371 (437)
T ss_dssp --------------------------------TTSCCHHHHHHHHHHHHHHHHHHHHTTT----EEESSCEETTEECCSS
T ss_pred --------------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHcC----CEEeccccCCCCCcee
Confidence 1222255667777888999999998863 4444 35 889
Q ss_pred ceeecCCC
Q psy14428 528 MFCYTGLS 535 (583)
Q Consensus 528 ~f~~~~l~ 535 (583)
+|.|..++
T Consensus 372 ~~~~~~~~ 379 (437)
T 3g0t_A 372 FYFTVGYK 379 (437)
T ss_dssp SEEEEEET
T ss_pred EEEEEecC
Confidence 99998765
No 35
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.7e-36 Score=318.45 Aligned_cols=300 Identities=13% Similarity=0.134 Sum_probs=234.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G 239 (583)
.+++.|||+.|.++ .+ +++.+.+++.+.+......+|++..|..+||+++|+++.+.+|+.+++ ++|++ |+|
T Consensus 35 ~g~~~idl~~g~~~--~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~--t~g 107 (412)
T 2x5d_A 35 RGEDIIDLSMGNPD--GP---TPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIV--TIG 107 (412)
T ss_dssp TTCCCEECSSCCCC--SC---CCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEE--ESC
T ss_pred cCCCEEecCCCCCC--CC---CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEE--cCC
Confidence 35678999999874 22 457888888877654324579888999999999999998777777888 79999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ +++ ++.+|++.+++.+ .++++++++++
T Consensus 108 ~~~a~~~~---~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~i---~~~~~~v~l~~ 180 (412)
T 2x5d_A 108 SKEGLAHL---MLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPL-VPGIDFFNELERAIRES---IPKPRMMILGF 180 (412)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEEC-STTSCHHHHHHHHHHTE---ESCCSEEEEES
T ss_pred hHHHHHHH---HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeec-CCccCCCCCHHHHHHhc---ccCceEEEECC
Confidence 99999985 4445677999999999999999999999999999998 443 2235677777665 35677888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....++++++.||||.+|++|+|+||++
T Consensus 181 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 258 (412)
T 2x5d_A 181 PSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGW--KAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMV 258 (412)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEE
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCChhhccCccCcEEEEecCccccCCcccceEEEE
Confidence 999999999999999999999999999999999999988642 222333332224689999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ + +++++++.........+++.+.|.++..++++..
T Consensus 259 ~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~------------------------------------- 294 (412)
T 2x5d_A 259 G--N-----PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQ------------------------------------- 294 (412)
T ss_dssp E--C-----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCS-------------------------------------
T ss_pred c--C-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCH-------------------------------------
Confidence 9 6 5889999887766677889999998888775410
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
++++++++++.++++.+.+.|++.+ +....+++|+|.|..++
T Consensus 295 -----------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~ 336 (412)
T 2x5d_A 295 -----------QCVRDIARQYQQRRDVLVKGLREAG----WMVENPKASMYVWAKIP 336 (412)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHHT----CCCCCCSBSSEEEEECC
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHCC----CEecCCCeeeEEEEEcC
Confidence 1144556667788888888888764 44566788999998775
No 36
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=4.3e-36 Score=320.69 Aligned_cols=300 Identities=15% Similarity=0.087 Sum_probs=228.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHh--cc-CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIY--EK-NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~--~~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
..|+|+.|.++.... + +++.+.+++.+.. .. ....+|++..|.++||++||+|+. +++++|++ |+|+
T Consensus 33 ~~i~l~~g~~~~~~~-~-~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~------~~~~~i~~--t~G~ 102 (422)
T 3d6k_A 33 LSLDLTRGKPSAEQL-D-LSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALG------LPADLVVA--QDGS 102 (422)
T ss_dssp CCEECCCCSCCHHHH-H-TTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHT------CCGGGEEE--CSSC
T ss_pred CeEeCCCCCCChhhC-C-CcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhC------CChhHEEE--ecch
Confidence 479999999852100 1 3345666554331 12 135689999999999999999993 67899999 9999
Q ss_pred hhHH--HHHHHHHHHhCCC------------CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 241 SGSL--RVGTAFLERFYPG------------VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 241 ~~al--~l~~~~l~~~~~~------------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
++++ .++ +..+.++ +|+|++++|+|..+...++..|++++.+|+ ++ .++|++.+++.+..
T Consensus 103 ~~al~l~~~---~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~--~g~d~~~l~~~l~~ 176 (422)
T 3d6k_A 103 SLNIMFDLI---SWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPM-TD--EGPDMGVVRELVKD 176 (422)
T ss_dssp HHHHHHHHH---HHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEE-ET--TEECHHHHHHHHTS
T ss_pred HHHHHHHHH---HHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCC-CC--CCCCHHHHHHHHhc
Confidence 9997 554 3333333 458999999999999999999999999999 55 36999999988832
Q ss_pred CCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHH-hcCeEEEEeccCCC--CCCCCCCCchHHHHHH---HHhcCcEEE
Q psy14428 307 MPERSILFL-QTSSHNPTGVDLSEDQWRQLAVVVK-QRHLYPFFDMAYLG--LTSGDFDKDAFSLRYF---AKEVGQLCL 379 (583)
Q Consensus 307 ~~~~~~~i~-i~~p~NPTG~~~s~~~~~~l~~~a~-~~~i~iI~De~Y~~--l~~~~~~~~~~~~~~~---~~~~~~vi~ 379 (583)
.++++++ +|+||||||.+++.+++++|+++|+ +++++||+||+|.+ |.+++ ....++..+ .+..+++|+
T Consensus 177 --~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~ 252 (422)
T 3d6k_A 177 --PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEF--PIVHNVIEFAQAAGNPNRFWF 252 (422)
T ss_dssp --TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC--CCCCCHHHHHHHTTCTTCEEE
T ss_pred --CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCC--CCCcChhhHhhccCCCCcEEE
Confidence 2567766 8999999999999999999999999 99999999999986 54432 123344332 234679999
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHH
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 459 (583)
++||||+ ++||+|+||+++ + +++++.+.........+++.++|.++..++++.
T Consensus 253 ~~S~SK~-~~~GlriG~~~~--~-----~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~------------------- 305 (422)
T 3d6k_A 253 MSSTSKI-THAGSGVSFFAS--S-----KENIEWYASHANVRGIGPNKLNQLAHAQFFGDV------------------- 305 (422)
T ss_dssp EEESTTT-SCTTSSCEEEEC--C-----HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSH-------------------
T ss_pred EcChhhh-cCcccceEEEEe--C-----HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCc-------------------
Confidence 9999999 679999999999 7 589999998887777889999999999998761
Q ss_pred HhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcccccccccceeecCCCh
Q psy14428 460 IRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSK-KNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 460 ~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~p-g~~~~~~~~~g~f~~~~l~~ 536 (583)
+.|.++++++++.+.++|+.+.+.|++.... |.+.+..+++|+|.|..++.
T Consensus 306 --------------------------~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~ 357 (422)
T 3d6k_A 306 --------------------------AGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVP 357 (422)
T ss_dssp --------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEEST
T ss_pred --------------------------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCC
Confidence 1233446666777778888887777653211 22455678899999987764
No 37
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.1e-35 Score=315.17 Aligned_cols=300 Identities=18% Similarity=0.158 Sum_probs=242.6
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-CCeEEEecCCchh
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-NRLAIVQGISGSG 242 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-~~I~i~~t~G~~~ 242 (583)
..|||+.|.+. ..+ +++.+.+++.+.+.......|.+..|..++|+++++++.+.+|..+++ ++|++ |+|+++
T Consensus 40 ~~id~~~g~~~-~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~--~~g~~~ 113 (407)
T 3nra_A 40 RPVDFSHGDVD-AHE---PTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLII--TPGTQG 113 (407)
T ss_dssp CCEETTSCCTT-TSC---CCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEE--ESHHHH
T ss_pred ceeeecCcCCC-CCC---CcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCcHH
Confidence 47999999875 112 457788887777654323469899999999999999998888888877 79999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEeccc-----CCCCCCChhhHHHHHHcCCCCcEEEEeC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD-----NKTNGLDFAGMMEDIKAMPERSILFLQT 317 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d-----~~~~g~d~~~l~~~l~~~~~~~~~i~i~ 317 (583)
++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ + ++++++|++.+++.+.. ++++++++
T Consensus 114 a~~~~---~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~~~ 186 (407)
T 3nra_A 114 ALFLA---VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQL-DYVSADETRAGLDLTGLEEAFKA---GARVFLFS 186 (407)
T ss_dssp HHHHH---HHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEB-CCCSSCCSSCCBCHHHHHHHHHT---TCCEEEEE
T ss_pred HHHHH---HHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeec-ccccccCcCCCcCHHHHHHHHhh---CCcEEEEc
Confidence 99985 4556777999999999999999999999999999998 3 24578999999999853 67788899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcccccccCccceE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSKNMGLYGERVGT 396 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~l~GlRiG~ 396 (583)
+||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+. ...++++++.||||.+|++|+|+||
T Consensus 187 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 264 (407)
T 3nra_A 187 NPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGA--SYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGV 264 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTC--CCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEE
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCCChhhcCcccCCcEEEEeCcccccCCCeeeEEE
Confidence 9999999999999999999999999999999999999998762 333343332 2357899999999999999999999
Q ss_pred EEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHH
Q psy14428 397 FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVT 476 (583)
Q Consensus 397 lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~ 476 (583)
+++ + +++++.+.........+.+.+.|.++..++++..
T Consensus 265 ~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~----------------------------------- 302 (407)
T 3nra_A 265 AFG--S-----RAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAP----------------------------------- 302 (407)
T ss_dssp EEE--C-----HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCT-----------------------------------
T ss_pred EEc--C-----HHHHHHHHHHHhhhccCCChHHHHHHHHHHhccc-----------------------------------
Confidence 999 6 6899999988777777888888888777776421
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 477 EILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 477 ~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+.++++++++.++++.+.+.|+++ | .+....+++|+|.|..++.
T Consensus 303 -------------~~~~~~~~~~~~~~~~l~~~L~~~--~-~~~~~~~~~~~~~~~~~~~ 346 (407)
T 3nra_A 303 -------------GWMEDRIARHQAIRDELLHVLRGC--E-GVFARTPQAGSYLFPRLPK 346 (407)
T ss_dssp -------------THHHHHHHHHHHHHHHHHHHHHTS--T-TCBCCCCSBSSEECCBCCC
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhcC--C-CceeccCCeeEEEEEeCCC
Confidence 012334455567788888888775 2 2556678889999988765
No 38
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=4.8e-35 Score=308.42 Aligned_cols=300 Identities=13% Similarity=0.152 Sum_probs=243.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.++|+.|.++. + +++.+.+++.+.++.. ..+|++..|..+||+++++++.+.+|+.+++++|++ |+|+
T Consensus 28 ~g~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~--~~g~ 99 (388)
T 1j32_A 28 EGIDVCSFSAGEPDF--N---TPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILV--TNGG 99 (388)
T ss_dssp TTCCCEECCCSSCSS--C---CCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESHH
T ss_pred cCCCEEECCCCCCCC--C---CCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--cCCH
Confidence 456789999998742 2 4578888887776543 467999999999999999999887788888999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++|+.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ +++.+|++.+++.+ .++++++++++|
T Consensus 100 ~~a~~~~---~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l---~~~~~~v~~~~p 172 (388)
T 1j32_A 100 KQSIFNL---MLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPT-TVETQFKVSPEQIRQAI---TPKTKLLVFNTP 172 (388)
T ss_dssp HHHHHHH---HHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECC-CGGGTTCCCHHHHHHHC---CTTEEEEEEESS
T ss_pred HHHHHHH---HHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecC-CcccCCCCCHHHHHHhc---CcCceEEEEeCC
Confidence 9999985 4445677999999999999999999999999999998 43 24678999998887 457889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcccccccCccceEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
|||||.+++.+++++|+++|+++|++||+||+|.++.+++. +..++..+. +..++++++.||||.+|++|+|+||++
T Consensus 173 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 250 (388)
T 1j32_A 173 SNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDA--QHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250 (388)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC--CCCCHHHccccccCCEEEEeechhccCCcccceEEEE
Confidence 99999999999999999999999999999999999988652 222332221 124579999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ + +++++++.........+++.+.|.++..+++...
T Consensus 251 ~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~------------------------------------- 286 (388)
T 1j32_A 251 G--P-----VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQ------------------------------------- 286 (388)
T ss_dssp C--C-----HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCS-------------------------------------
T ss_pred e--C-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCc-------------------------------------
Confidence 8 6 5789999887777777889999988877765310
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
++++++++++.++++.+.+.|++. || +....+++|+|.|..++
T Consensus 287 -----------~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~ 329 (388)
T 1j32_A 287 -----------DCVQEMLAAFAERRRYMLDALNAM--PG-LECPKPDGAFYMFPSIA 329 (388)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHTC--TT-CBCCCCCBTTEECCBCG
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHhhC--CC-CcccCCCeeEEEEEecC
Confidence 124455666778888888999874 32 55667788999998764
No 39
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.1e-34 Score=310.15 Aligned_cols=302 Identities=15% Similarity=0.204 Sum_probs=234.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhc---------c-CCCCCCCCCCCCHHHHHHHHHHHhCCCCCC--CCCCC
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYE---------K-NLDHEYANIGGDAKFCKLAAQLAYGEDFPA--FKDNR 231 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~---------~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~--~~~~~ 231 (583)
..++|+.+.. +.+++.+.+++.+... . .....|+++.|..+||+++|+++++.+|.. +++++
T Consensus 37 ~~i~l~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 37 GVIQMGLAEN------QLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp SBEECSSCCC------CSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred ceeeeccccc------hhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 5577776553 2234577777664321 0 013569888899999999999999877765 78899
Q ss_pred eEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-hcCCeEEEEecccC-CCCCCChhhHHHHHHc---
Q psy14428 232 LAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDN-KTNGLDFAGMMEDIKA--- 306 (583)
Q Consensus 232 I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~--- 306 (583)
|++ |+|+++++.++ +..++.+||+|++++|+|..+...+. ..|++++.+|+ +. +++++|++.+++.++.
T Consensus 111 i~~--~~G~~~ai~~~---~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l~~~~~ 184 (428)
T 1iay_A 111 VVM--AGGATGANETI---IFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHC-ESSNNFKITSKAVKEAYENAQK 184 (428)
T ss_dssp CEE--EEHHHHHHHHH---HHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECC-CTTTTTCCCHHHHHHHHHHHHH
T ss_pred EEE--ccChHHHHHHH---HHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeec-CCccCCcCCHHHHHHHHHHHHh
Confidence 999 99999999985 44566779999999999999987554 68999999998 43 3467899999988854
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-------cCcEEE
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-------VGQLCL 379 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-------~~~vi~ 379 (583)
...++++++++|||||||.+++.+++++|+++|++++++||+||+|.++.+++ ....++..+... .+++++
T Consensus 185 ~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~viv 262 (428)
T 1iay_A 185 SNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDT--PQFVSIAEILDEQEMTYCNKDLVHI 262 (428)
T ss_dssp TTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSS--SCCCCHHHHHTSGGGTTSCTTSEEE
T ss_pred cCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCC--CCccCHHHhccccccccCCCCcEEE
Confidence 23468889999999999999999999999999999999999999999988864 223344454333 579999
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHH
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 459 (583)
+.||||.||++|+|+||+++ ++ +++++++.+... ..+++.++|.++..++++..+
T Consensus 263 ~~s~sK~~g~~Glr~G~~~~--~~----~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~----------------- 317 (428)
T 1iay_A 263 VYSLSKDMGLPGFRVGIIYS--FN----DDVVNCARKMSS--FGLVSTQTQYFLAAMLSDEKF----------------- 317 (428)
T ss_dssp EEESTTTSSCGGGCEEEEEE--SC----HHHHHHHHHHHT--TSCCCHHHHHHHHHHTTCHHH-----------------
T ss_pred EecchhhcCCCCceEEEEEe--CC----HHHHHHHHHHHh--cccCCHHHHHHHHHHhcChHH-----------------
Confidence 99999999999999999999 65 468888876543 357889999999998876321
Q ss_pred HhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 460 IRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 460 ~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+.++++++++++.++++.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 318 ----------------------------~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~ 362 (428)
T 1iay_A 318 ----------------------------VDNFLRESAMRLGKRHKHFTNGLEVVG----IKCLKNNAGLFCWMDLRP 362 (428)
T ss_dssp ----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHTT----CCBCCCSSSSEEEEECGG
T ss_pred ----------------------------HHHHHHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEechh
Confidence 112355667777888999999998864 445566789999987754
No 40
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6.6e-35 Score=307.94 Aligned_cols=254 Identities=17% Similarity=0.132 Sum_probs=213.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.++|+.|.++. + +++.+.+++.+.+... ...|++..|..+||+++++++.+.+|+++++++|++ |+|+
T Consensus 39 ~g~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~--~~g~ 110 (389)
T 1o4s_A 39 KGEDVINLTAGEPDF--P---TPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVV--TNGA 110 (389)
T ss_dssp TTCCCEECCCSSCSS--C---CCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEE--ESHH
T ss_pred cCCCEEEccCCCCCC--C---CCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEE--ecCH
Confidence 356789999998742 2 3578888888777543 457988899999999999999877788788999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ +++++|++.+++.+ .++++++++++|
T Consensus 111 t~al~~~---~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l---~~~~~~v~~~~p 183 (389)
T 1o4s_A 111 KQALFNA---FMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVET-FMSKNFQPSLEEVEGLL---VGKTKAVLINSP 183 (389)
T ss_dssp HHHHHHH---HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-CGGGTTCCCHHHHHHTC---CTTEEEEEEESS
T ss_pred HHHHHHH---HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEec-CCccCCCCCHHHHHHhc---ccCceEEEEcCC
Confidence 9999986 4445677999999999999999999999999999998 44 34678999998877 457888999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|+++|++||+||+|.++.+++ ...++..+....+++++++||||.+|++|+|+||+++
T Consensus 184 ~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g---~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~ 260 (389)
T 1o4s_A 184 NNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD---EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLIS 260 (389)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS---CCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEe
Confidence 9999999999999999999999999999999999998864 2234444422257899999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++++.........+++.+.|.++..++++
T Consensus 261 --~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 293 (389)
T 1o4s_A 261 --S-----EKVATAVSKIQSHTTSCINTVAQYAALKALEV 293 (389)
T ss_dssp --C-----HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC
T ss_pred --C-----HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhc
Confidence 6 57899988877666678899999988888875
No 41
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2.6e-35 Score=316.92 Aligned_cols=294 Identities=15% Similarity=0.156 Sum_probs=232.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc----CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK----NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+++.|+|+.|+++.. +++.+.+++.+.... .....|++..|.++||+++++++. +|+.+++++|++
T Consensus 67 ~~~~~i~l~~g~~~~~-----~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~-- 137 (449)
T 3qgu_A 67 PDAKIISLGIGDTTEP-----LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFI-- 137 (449)
T ss_dssp TTCCCEECSSCCCCCC-----CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEE--
T ss_pred CCCCEEEeeCCCCCCC-----CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEE--
Confidence 4668999999976522 457788887776653 235679999999999999999998 788899999999
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCe----------EEEEecccCCCCCCChhhHHHHHHc
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLN----------VGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~----------~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
|+|+++++.++ ..+..+||+|++++|+|..+...++..|++ ++.+|+.+.+++..+++.
T Consensus 138 t~G~~~al~~~----~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 206 (449)
T 3qgu_A 138 SDGSKCDIARI----QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSK------- 206 (449)
T ss_dssp ESCHHHHHHHH----HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGG-------
T ss_pred ccCHHHHHHHH----HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhH-------
Confidence 99999999985 233456999999999999999999999999 999998322223333322
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++. .+.++..+....+++|++.||||+
T Consensus 207 -~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~ 283 (449)
T 3qgu_A 207 -AKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD--CPKTIYEIPGADEVAIETCSFSKY 283 (449)
T ss_dssp -CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTT--SCSSGGGSTTGGGTEEEEEECSGG
T ss_pred -cCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCC--CCCCHhhccCCCCcEEEEecchhh
Confidence 15677888889999999999999999999999999999999999999998752 233444433335789999999999
Q ss_pred ccccCccceEEEEEcCCchhHHHHHH--------HHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHH
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMS--------QLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~--------~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 458 (583)
+|++|+|+||+++ ++ ++++ .+.......+.+++.++|.++..++++..
T Consensus 284 ~g~~G~r~G~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----------------- 339 (449)
T 3qgu_A 284 AGFTGVRLGWTVV--PK-----ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG----------------- 339 (449)
T ss_dssp GTCTTCCCEEEEC--CT-----TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH-----------------
T ss_pred cCCccceeEEEec--CH-----HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC-----------------
Confidence 9999999999999 63 3443 45555566667889999998888876411
Q ss_pred HHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 459 LIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 459 ~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.++++++++++.++++.+.+.|++.+ +.+..+++|+|.|..++
T Consensus 340 ------------------------------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~ 382 (449)
T 3qgu_A 340 ------------------------------LKEMNAMIKFYKENAQILKTTFTEMG----FSVYGGDDAPYIWVGFP 382 (449)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHHHHHHHHHHTT----CCEEESSSSSEEEEECT
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHHHHCC----CeeeCCCCeeEEEEECC
Confidence 12356677788889999999998864 55667888999998876
No 42
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.8e-35 Score=314.67 Aligned_cols=306 Identities=13% Similarity=0.099 Sum_probs=245.2
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCC
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGIS 239 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G 239 (583)
++.|+|+.|.++ .+ +++.+.+++.+.+... ...+|++..|.++||+++++++.+.+|..++++ +|++ |+|
T Consensus 37 ~~~i~l~~~~~~--~~---~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~--~~g 109 (429)
T 1yiz_A 37 YKPLNLGQGFPD--YH---APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLV--TVG 109 (429)
T ss_dssp HCCEECCSSSCS--SC---CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEE--ESH
T ss_pred CCEEEecCCCCC--CC---CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEE--ecC
Confidence 467999999874 22 4578888888777541 246798889999999999999987777778899 9999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC---------CCCCChhhHHHHHHcCCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK---------TNGLDFAGMMEDIKAMPER 310 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~---------~~g~d~~~l~~~l~~~~~~ 310 (583)
+++++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ +++ ++++|++.+++.+ .++
T Consensus 110 ~~~a~~~~---~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~d~~~l~~~l---~~~ 182 (429)
T 1yiz_A 110 AYEALYAT---IQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPL-KPNKTGGTISSADWVLDNNELEALF---NEK 182 (429)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-BCCCSSSSEEGGGCBCCHHHHHHHC---CTT
T ss_pred hHHHHHHH---HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeC-CcccccccccccCcccCHHHHHHHh---ccC
Confidence 99999985 4445677999999999999999999999999999998 543 4678999998887 467
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc
Q psy14428 311 SILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY 390 (583)
Q Consensus 311 ~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~ 390 (583)
++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+.+..++++++.||||.+|++
T Consensus 183 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~s~sK~~~~~ 260 (429)
T 1yiz_A 183 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPF--EHIRICTLPGMWERTITIGSAGKTFSLT 260 (429)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTS--CCCCGGGSTTTGGGEEEEEEHHHHHTCG
T ss_pred ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCC--CCcChhhccCCcCceEEEecchhccCCC
Confidence 88899999999999999999999999999999999999999999988652 2223333222356899999999999999
Q ss_pred CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccc
Q psy14428 391 GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIH 470 (583)
Q Consensus 391 GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~ 470 (583)
|+|+||+++ + +++++.+.........+++.+.|.++..++++..
T Consensus 261 G~r~G~~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~----------------------------- 304 (429)
T 1yiz_A 261 GWKIGWAYG--P-----EALLKNLQMVHQNCVYTCATPIQEAIAVGFETEL----------------------------- 304 (429)
T ss_dssp GGCCEEEES--C-----HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH-----------------------------
T ss_pred CcceEEEEe--C-----HHHHHHHHHHHhhcccCCChHHHHHHHHHHhccc-----------------------------
Confidence 999999999 6 5789999887776777889999988887775400
Q ss_pred hhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 471 GARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 471 g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..+. .+.+.++++++++.++++.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 305 -----~~~~-------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~ 354 (429)
T 1yiz_A 305 -----KRLK-------SPECYFNSISGELMAKRDYMASFLAEVG----MNPTVPQGGYFMVADWSS 354 (429)
T ss_dssp -----TTTT-------STTSHHHHHHHHHHHHHHHHHHHHHHHT----CEEEECSBSSEEEEECCS
T ss_pred -----cccc-------chHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCcceEEEEEccc
Confidence 0000 0112255667777888999999998864 455667889999987754
No 43
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.7e-34 Score=306.30 Aligned_cols=303 Identities=18% Similarity=0.197 Sum_probs=240.3
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+.|||+.|.++.. .++++.+.+++.+.+... ... |++..|..+||+++++++.+.+|+.+++++|++ |+|++
T Consensus 35 ~~idl~~g~~~~~---~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~--t~g~t 108 (407)
T 2zc0_A 35 KLISLAAGDPDPE---LIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVI--TIGGT 108 (407)
T ss_dssp CCEECCSCCCCTT---TSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEE--ESHHH
T ss_pred ceEeCCCCCCCch---hCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEE--ecCHH
Confidence 6899999987533 235578888887776542 235 988899999999999999876777788999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc---CCCCcEEE-EeC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA---MPERSILF-LQT 317 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~---~~~~~~~i-~i~ 317 (583)
+|+.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ .++|++.+++.+.. ...+++++ +++
T Consensus 109 ~a~~~~---~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~--~~~d~~~l~~~l~~~~~~~~~~~~v~~~~ 182 (407)
T 2zc0_A 109 GALDLL---GRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPV-DN--DGMRVDLLEEKIKELKAKGQKVKLIYTIP 182 (407)
T ss_dssp HHHHHH---HHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEE-ET--TEECHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHH---HHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEccc-CC--CCCCHHHHHHHHHhhhcccCCceEEEECC
Confidence 999985 4445667999999999999999999999999999998 54 35899999998851 11356665 689
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
+||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ +..+++++++||||.++ +|+|+||+
T Consensus 183 ~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~-~G~r~G~~ 258 (407)
T 2zc0_A 183 TGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGG--DIVPLKAL-DNEGRVIVAGTLSKVLG-TGFRIGWI 258 (407)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCS--SCCCGGGG-CSSCCEEEEEESTTTTC-TTSCCEEE
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCC--CCCChhhc-CCCCCEEEEcccccccC-CCcceEEE
Confidence 9999999999999999999999999999999999999988652 22333333 23468999999999999 99999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
++ + +++++++.........+++.+.|.++..++++..++
T Consensus 259 ~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------------- 297 (407)
T 2zc0_A 259 IA--E-----GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFE---------------------------------- 297 (407)
T ss_dssp EC--C-----HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHH----------------------------------
T ss_pred ec--C-----HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCch----------------------------------
Confidence 99 6 578999988777667778999999888888653211
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++++.+.+.|++.. || +....+++|+|.|..++.
T Consensus 298 -----------~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~~~~~~~~~~~~~~~~~~ 343 (407)
T 2zc0_A 298 -----------KYHLEGALLGYKEKRDIMLKALENHL-PN-AEFTKPIAGMFVMFFLPE 343 (407)
T ss_dssp -----------HHTTTTHHHHHHHHHHHHHHHHHHHC-TT-SCBCCCSBSSEEEEECST
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHhC-CC-CEEecCCCcEEEEEEcCC
Confidence 01234455566778888888887753 33 555567889999987753
No 44
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=9.3e-35 Score=308.50 Aligned_cols=302 Identities=13% Similarity=0.124 Sum_probs=239.9
Q ss_pred CCCCccccCCccccC-CCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRG-EDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~-~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+++.++|+.|.+.. ..+ +++.+.+++.+.+... ...|++..|.++||+++++++...+|+.+++++|++ |+|
T Consensus 36 ~g~~~i~l~~~~~~~~~~~---~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~--t~g 109 (406)
T 1xi9_A 36 KGIKVIRLNIGDPVKFDFQ---PPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRV--TAA 109 (406)
T ss_dssp TTCCCEECCCCCGGGTTCC---CCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESH
T ss_pred cCCCEEEecCCCCCcCCCC---CCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEE--cCC
Confidence 356789999998832 112 4578888887776543 357988899999999999999888888889999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++|+.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ +++.+|++.+++.+ .++++++++++
T Consensus 110 ~~~al~~~---~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l---~~~~~~v~i~~ 182 (406)
T 1xi9_A 110 VTEALQLI---FGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRT-IEEEDWQPDIDDIRKKI---TDRTKAIAVIN 182 (406)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEE-EGGGTSEECHHHHHHHC---CTTEEEEEEES
T ss_pred hHHHHHHH---HHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeec-CCCcCCcCCHHHHHHhh---CcCceEEEEEC
Confidence 99999986 4445677999999999999999999999999999998 44 34568999998887 45788889999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCc-EEEEecCcccccccCccceEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQ-LCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~l~GlRiG~l 397 (583)
||||||.+++.+++++|+++|+++|++||+||+|.++.+++ ...++..+ + .++ +|+++||||.++++|+|+||+
T Consensus 183 p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~---~~~~~~~~-~-~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (406)
T 1xi9_A 183 PNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG---EHISPGSL-T-KDVPVIVMNGLSKVYFATGWRLGYM 257 (406)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS---CCCCHHHH-C-SSSCEEEEEESTTTTCCGGGCCEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC---CCCCHHHc-C-CCceEEEEeccccccCCCccEEEEE
Confidence 99999999999999999999999999999999999998843 23345554 3 577 999999999999999999999
Q ss_pred E--EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHH
Q psy14428 398 S--VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIV 475 (583)
Q Consensus 398 v--~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~ 475 (583)
+ + ++. ...++++++....... .+++.+.|.++..+++...
T Consensus 258 ~~~~--~~~-~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~---------------------------------- 299 (406)
T 1xi9_A 258 YFVD--PEN-KLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPM---------------------------------- 299 (406)
T ss_dssp EEEC--TTC-TTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCC----------------------------------
T ss_pred EEec--Cch-hHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCc----------------------------------
Confidence 9 6 620 0016888888766555 6788888888887774210
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
+.++++++++.++++.+.+.|++. || +....+++|+|.|..++
T Consensus 300 --------------~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~ 342 (406)
T 1xi9_A 300 --------------DYLKEYMKKLKERRDYIYKRLNEI--PG-ISTTKPQGAFYIFPKIE 342 (406)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHTS--TT-EECCCCCBSSEECCEEC
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHhC--CC-CeeecCCeeEEEEEecC
Confidence 013455666678888888888874 33 55566788999997654
No 45
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=4e-34 Score=306.52 Aligned_cols=303 Identities=16% Similarity=0.207 Sum_probs=238.1
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccC-----------CCCCCCCCCCCHHHHHHHHHHHhC--CCCCCCCCC
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-----------LDHEYANIGGDAKFCKLAAQLAYG--EDFPAFKDN 230 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-----------~~~~Y~~~~G~~~Lr~aia~~~~~--~~g~~~~~~ 230 (583)
..|+|+.+.. +...+.+.+++.+..... ...+|.+..|.++||+++++++++ .+++.++++
T Consensus 39 ~~i~lg~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~ 112 (435)
T 3piu_A 39 GIIQMGLAEN------QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN 112 (435)
T ss_dssp SBEECSSCCC------CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG
T ss_pred CeEEeccccc------cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH
Confidence 4567877554 334577777776654321 015699999999999999999984 344678899
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-hcCCeEEEEecccCCCCCCChhhHHHHHHcC--
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-- 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-- 307 (583)
+|++ |+|+++|+.++ +..++.+||.|++++|+|..+...+. ..|++++.+++.+..++.+|++.+++.+++.
T Consensus 113 ~v~~--~~gg~~a~~~~---~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 187 (435)
T 3piu_A 113 HLVL--TAGATSANETF---IFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEK 187 (435)
T ss_dssp GEEE--EEHHHHHHHHH---HHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHH
T ss_pred HEEE--cCChHHHHHHH---HHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHh
Confidence 9999 99999999985 45567779999999999999998888 7899999999833234668999999988642
Q ss_pred -CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh---------cCcE
Q psy14428 308 -PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE---------VGQL 377 (583)
Q Consensus 308 -~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~---------~~~v 377 (583)
..+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+.+ ....++..+... .+++
T Consensus 188 ~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~ 265 (435)
T 3piu_A 188 RNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS--PSFISVMEVLKDRNCDENSEVWQRV 265 (435)
T ss_dssp TTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS--SCCCCHHHHHHC-------CGGGGE
T ss_pred cCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCcCHHHhccccccccccCCCCCE
Confidence 3478899999999999999999999999999999999999999999988876 233445554333 5789
Q ss_pred EEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHH
Q psy14428 378 CLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLK 457 (583)
Q Consensus 378 i~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~ 457 (583)
++++||||.+|++|+|+||+++ ++ +.+++.+.+... ..+.+.+.|.+++.++++..+
T Consensus 266 i~i~s~sK~~g~~G~r~G~~~~--~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~--------------- 322 (435)
T 3piu_A 266 HVVYSLSKDLGLPGFRVGAIYS--ND----DMVVAAATKMSS--FGLVSSQTQHLLSAMLSDKKL--------------- 322 (435)
T ss_dssp EEEEESSSSSCCGGGCEEEEEE--SC----HHHHHHHHHHGG--GSCCCHHHHHHHHHHHHCHHH---------------
T ss_pred EEEEeeecccCCCceeEEEEEe--CC----HHHHHHHHHHhh--cCCCCHHHHHHHHHHhcChHH---------------
Confidence 9999999999999999999999 75 467777765432 346788888888888765321
Q ss_pred HHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 458 ILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 458 ~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..++++++++++.++++.+.+.|++.+ +.+..+++|+|.|..++.
T Consensus 323 ------------------------------~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~l~~ 367 (435)
T 3piu_A 323 ------------------------------TKNYIAENHKRLKQRQKKLVSGLQKSG----ISCLNGNAGLFCWVDMRH 367 (435)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHHHHHHHHHHTTT----CEECCCCSSSEEEEECGG
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHHHHhcC----CcccCCCeeEEEEEEccc
Confidence 122356677788889999999998764 556678889999988764
No 46
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.4e-35 Score=311.49 Aligned_cols=299 Identities=14% Similarity=0.117 Sum_probs=240.9
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~ 240 (583)
.++.|+|+.|.++. + +++.+.+++.+.+.+. ...|++..|.++||+++++++.+.+|+.++++ +|++ |+|+
T Consensus 24 ~~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~--t~g~ 95 (411)
T 2o0r_A 24 RIGAVNLGQGFPDE--D---GPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLV--TVGA 95 (411)
T ss_dssp TTTCEESSCSSCSS--C---CCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEE--EEHH
T ss_pred cCCeeeccCcCCCC--C---CCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEE--eCCH
Confidence 34679999998742 2 4578888888877653 56799999999999999999987778888888 9999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC--CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK--TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~--~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
++|+.++ +..+..+||+|++++|+|..+...++..|++++.+|+ +++ ++.+|++.+++.+ .++++++++++
T Consensus 96 ~~al~~~---~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~d~~~l~~~l---~~~~~~v~l~~ 168 (411)
T 2o0r_A 96 TEAIAAA---VLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPL-VPDGRGFALDADALRRAV---TPRTRALIINS 168 (411)
T ss_dssp HHHHHHH---HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-EEETTEEECCHHHHHHHC---CTTEEEEEEES
T ss_pred HHHHHHH---HHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeec-cccccCCCCCHHHHHHhh---ccCceEEEEeC
Confidence 9999985 4445677999999999999999999999999999998 443 3558999998887 45788999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....++++++.||||.+|++|+|+||++
T Consensus 169 ~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 246 (411)
T 2o0r_A 169 PHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA--RHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWAC 246 (411)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcChhhccCCCCCEEEEeechhhcCCccceEEEEe
Confidence 999999999999999999999999999999999999988652 223333322224689999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ + +++++.+.........+.+.+.|.++..+++..
T Consensus 247 ~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-------------------------------------- 281 (411)
T 2o0r_A 247 G--P-----AELIAGVRAAKQYLSYVGGAPFQPAVALALDTE-------------------------------------- 281 (411)
T ss_dssp C--C-----HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC--------------------------------------
T ss_pred e--C-----HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC--------------------------------------
Confidence 8 6 578888887766556677788888777666321
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+.++++++++.++++.+.+.|++.+ +....+++|+|.|..++.
T Consensus 282 ----------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~g~~~~~~~~~ 325 (411)
T 2o0r_A 282 ----------DAWVAALRNSLRARRDRLAAGLTEIG----FAVHDSYGTYFLCADPRP 325 (411)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHHT----CEECCCCBSSEEEEECGG
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHHcC----CEecCCCeeEEEEEecCC
Confidence 11245566777888888888888764 555667889999987753
No 47
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=2.9e-34 Score=300.61 Aligned_cols=287 Identities=14% Similarity=0.186 Sum_probs=233.4
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+++.|+|+.|.++. + +++.+.+++.+.+... ..+|++..|.++||+++++++...+|+.+++++|++ |+|++
T Consensus 28 g~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~--~~g~~ 99 (370)
T 2z61_A 28 GKKVIHLEIGEPDF--N---TPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKDKYKADIIPDNIII--TGGSS 99 (370)
T ss_dssp TCCCEECCCCSCSS--C---CCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEE--ESSHH
T ss_pred CCCEEEccCCCCCC--C---CCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE--CCChH
Confidence 56789999999842 2 3578888887777543 467988899999999999999988888899999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..+..+||+|++++|+|..+...++..|++++.+| +|++.+++.+ .++++++++++|||
T Consensus 100 ~a~~~~---~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l---~~~~~~v~~~~p~n 165 (370)
T 2z61_A 100 LGLFFA---LSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEAL---SDKTKAIIINSPSN 165 (370)
T ss_dssp HHHHHH---HHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHC---CSSEEEEEEESSCT
T ss_pred HHHHHH---HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhc---ccCceEEEEcCCCC
Confidence 999985 444567799999999999999999999999998886 3788888877 45788899999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+ |+++|+++|++||+||+|.++.+++. ..++..+.+..++++++.||||.+|++|+|+||+++
T Consensus 166 ptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-- 236 (370)
T 2z61_A 166 PLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK---CYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVIS-- 236 (370)
T ss_dssp TTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC---CCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEEC--
T ss_pred CcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC---CcCHHHccCCCCcEEEEecChhccCCccceEEEEEE--
Confidence 999999988 89999999999999999999988651 223333222357899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC-hhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD-PKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++.........+++.+.|.++..+++. .
T Consensus 237 ~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------------------------------------- 271 (370)
T 2z61_A 237 N-----DEIIEAILKLQQNLFISAPTISQYAALKAFEKET---------------------------------------- 271 (370)
T ss_dssp C-----HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH----------------------------------------
T ss_pred C-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC----------------------------------------
Confidence 7 57889888877666678888888887776653 1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++++.+.+.|++.+ +....+++|+|.|..++.
T Consensus 272 --------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~ 315 (370)
T 2z61_A 272 --------EREINSMIKEFDRRRRLVLKYVKDFG----WEVNNPIGAYYVFPNIGE 315 (370)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHTT----CBCCCCCBTTEECCBCSS
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHcC----CeecCCCcceEEEEecCC
Confidence 11245566777888888999888763 455667889999987753
No 48
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=8e-35 Score=305.21 Aligned_cols=297 Identities=10% Similarity=0.033 Sum_probs=242.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.|||+.|.+.. + +++.+.+++.+.+... ..+|++ .| .+||+++++++.+.+++.+++++|++ |+|+
T Consensus 21 ~g~~~idl~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~ 90 (377)
T 3fdb_A 21 YGQGVLPLWVAESDF--S---TCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFP--IPDV 90 (377)
T ss_dssp SCTTSEECCSSCCCS--C---CCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEE--ESCH
T ss_pred cCCCeeeecccCCCC--C---CCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEE--eCCh
Confidence 356789999997642 2 5678888888777653 567988 88 99999999999988888899999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..+..+||+|+++.|+|..+...++..|++++.+|+ +++ +|++.+++.+. ++++++++++||
T Consensus 91 ~~a~~~~---~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~---~d~~~l~~~l~---~~~~~v~i~~p~ 160 (377)
T 3fdb_A 91 VRGLYIA---IDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDA-TGG---INLHDVEKGFQ---AGARSILLCNPY 160 (377)
T ss_dssp HHHHHHH---HHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEEC-TTS---CCHHHHHHHHH---TTCCEEEEESSB
T ss_pred HHHHHHH---HHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccC-CCC---CCHHHHHHHhc---cCCCEEEEeCCC
Confidence 9999985 4456677999999999999999999999999999998 443 89999999985 357799999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC-CCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD-FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~-~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
||||.+++.+++++|+++|+++|++||+||+|.++.+++ . ...++..+. ..++++++.||||.+|++|+|+||+++
T Consensus 161 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~ 237 (377)
T 3fdb_A 161 NPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQH--TVAAGVSDT-AASVCITITAPSKAWNIAGLKCAQIIF 237 (377)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCC--CCGGGSCHH-HHHHEEEEECSTTTTTCGGGCCEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCC--CcccHHHcc-CCCcEEEEEeChHhccCcchhheEEEe
Confidence 999999999999999999999999999999999998865 2 223333332 246899999999999999999999988
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
++ +++++.+.........+++.++|.++...+++.
T Consensus 238 --~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--------------------------------------- 272 (377)
T 3fdb_A 238 --SN----PSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG--------------------------------------- 272 (377)
T ss_dssp --CS----HHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC---------------------------------------
T ss_pred --CC----HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc---------------------------------------
Confidence 55 478888887766667788999998887776431
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++++.++++.+.+.|++.. || +....++++++.|..++.
T Consensus 273 ---------~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~~~~~~~~~~~~~~~~~~ 318 (377)
T 3fdb_A 273 ---------TDFLNQEVAYLKNNHDFLLHEIPKRI-PG-AKITPMQATYLMWIDFRD 318 (377)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHHS-TT-CEECCCSBCSEEEEECTT
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHhhC-CC-ceEecCCeeEEEEEECcc
Confidence 11245566677888888888888742 32 666778999999877655
No 49
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=2.4e-34 Score=306.07 Aligned_cols=310 Identities=14% Similarity=0.134 Sum_probs=236.5
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhC------CCCCCCCCCCeEEEe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYG------EDFPAFKDNRLAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~------~~g~~~~~~~I~i~~ 236 (583)
++.|+|+.|.++.. ....+++.+.+++.+.+......+|++..|..+||+++|+++.+ .+|+.+++++|++
T Consensus 33 ~~~i~l~~g~p~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~-- 109 (416)
T 1bw0_A 33 KPIIKLSVGDPTLD-KNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVL-- 109 (416)
T ss_dssp SCCEECCCCCTTTT-SCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEE--
T ss_pred CCeEEecCcCCCcc-cCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEE--
Confidence 56899999998531 11235688888888877654356798889999999999999982 3678888999999
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFL 315 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~ 315 (583)
|+|+++++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ +++ ++++|++.+++.+ .+++++++
T Consensus 110 ~~g~~~al~~~---~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l---~~~~~~v~ 182 (416)
T 1bw0_A 110 CSGGSHGILMA---ITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNC-RPENDWEADLDEIRRLK---DDKTKLLI 182 (416)
T ss_dssp ESHHHHHHHHH---HHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEE-EGGGTTEECHHHHHHHC---CTTEEEEE
T ss_pred eCChHHHHHHH---HHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeec-CcccCCCCCHHHHHHHh---ccCCeEEE
Confidence 99999999985 4445677999999999999999999999999999998 443 4568999998877 45678899
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC--chHHHHHHHHhcCcEEEEecCcccccccCcc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK--DAFSLRYFAKEVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~--~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR 393 (583)
+++||||||.+++.+++++|+++|+++|++||+||+|.++.+++... ...++..+ +..+++++++||||.|+++|+|
T Consensus 183 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~Glr 261 (416)
T 1bw0_A 183 VTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF-ETTVPRVILGGTAKNLVVPGWR 261 (416)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS-CCSCCEEEEEESTTTTSCGGGC
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHc-cCCCcEEEEecchhhCCCCCce
Confidence 99999999999999999999999999999999999999998865200 12233322 2345799999999999999999
Q ss_pred ceEEEEEcCCc-hhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchh
Q psy14428 394 VGTFSVLTPTS-DETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGA 472 (583)
Q Consensus 394 iG~lv~~~p~~-~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~ 472 (583)
+||+++ +++ +..+.+.+.+.+... ...+++.+.|.++..+++...
T Consensus 262 ~G~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~------------------------------- 307 (416)
T 1bw0_A 262 LGWLLY--VDPHGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEALLNTP------------------------------- 307 (416)
T ss_dssp CEEEEE--ECTTCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHHHHSSC-------------------------------
T ss_pred EEEEEe--eCchhhHHHHHHHHHHHhc-cccCCCcHHHHHHHHHHhccc-------------------------------
Confidence 999999 653 222234444433321 245778888888888775310
Q ss_pred hHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 473 RIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 473 ~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+.++++++++.+.++.+.+.|+++ || +....+++|+|.|..++.
T Consensus 308 ----------------~~~~~~~~~~~~~~~~~l~~~L~~~--~g-~~~~~~~~~~~~~~~~~~ 352 (416)
T 1bw0_A 308 ----------------QEHLDQIVAKIEESAMYLYNHIGEC--IG-LAPTMPRGAMYLMSRIDL 352 (416)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHHTTS--TT-EEECCCCBTTEEEEEECG
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHhC--CC-CcccCCCeeEEEEEeCCH
Confidence 0123445566677888888888764 33 555567889999976653
No 50
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.7e-35 Score=314.87 Aligned_cols=302 Identities=16% Similarity=0.145 Sum_probs=226.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC----CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN----LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+++.|+|+.|.|+.. |.+.+.+.+++.++..+. ..++|++..|.++||+++|+++.+.+|+.+++++|++
T Consensus 29 ~~~~~i~l~~g~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~-- 103 (417)
T 3g7q_A 29 RTPGAIMLGGGNPAHI---PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIAL-- 103 (417)
T ss_dssp ---CCEECSCCCCCCC---HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEE--
T ss_pred cCCCceEecCcCCCCC---ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEE--
Confidence 5578999999988631 223367777777766442 1257999999999999999999888899999999999
Q ss_pred cCCchhHHHHHHHHHHHhCCCCC-----EEEEc-CCCChhhHHHHhh------cCCeEEEEecccCCCCCCChhhHHHHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVK-----TVYFP-TPTWNGHVRFCTD------SRLNVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd-----~Vlv~-~P~y~~~~~~~~~------~G~~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
|+|+++|+.++ +..+..+|| .|+++ +|+|..+...+.. .+..+..++. +..++++|++.++ +
T Consensus 104 t~G~t~al~~~---~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~--~ 177 (417)
T 3g7q_A 104 TNGSQSAFFYL---FNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPE-GQFKYHVDFEHLH--I 177 (417)
T ss_dssp ESCHHHHHHHH---HHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGG-GEEEEECCGGGCC--C
T ss_pred eCCcHHHHHHH---HHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCC-cccccccCHHHhc--c
Confidence 99999999995 445666677 89997 9999999876532 2344555544 2123567888876 3
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.......... .+..+++|++.|||
T Consensus 178 ---~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~-----~~~~~~~i~~~s~s 249 (417)
T 3g7q_A 178 ---GEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEAR-----PLWNPNIILCMSLS 249 (417)
T ss_dssp ---CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCC-----CCCCTTEEEEEESG
T ss_pred ---ccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccc-----cCCCCCEEEEEech
Confidence 5788999999999999999999999999999999999999999998743221000000 12357899999999
Q ss_pred ccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhcc
Q psy14428 385 KNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFY 464 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~ 464 (583)
| ++++|+|+||+++ + +++++++.........+++.+.|.++..++++..+.
T Consensus 250 K-~~~~G~r~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------------- 300 (417)
T 3g7q_A 250 K-LGLPGSRCGIIIA--N-----DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLL--------------------- 300 (417)
T ss_dssp G-GTCTTSCCEEEEC--C-----HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHH---------------------
T ss_pred h-ccCCCcceEEEEe--C-----HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchH---------------------
Confidence 9 6889999999998 6 689999999888888889999999999888764322
Q ss_pred CCCccchhhHHHHhcCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCC-CcccccccccceeecCCCh
Q psy14428 465 SNPPIHGARIVTEILSDPKLKAQWFEECKG-MSNRISSIREELKSKILDKGSKK-NWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 465 ~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~-~~~~~~~~r~~l~~~L~~~~~pg-~~~~~~~~~g~f~~~~l~~ 536 (583)
+++++ +++++.++++.+.+.|++.. ++ .+.+..+++|+|.|..++.
T Consensus 301 -------------------------~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~g~~~~~~~~~ 348 (417)
T 3g7q_A 301 -------------------------RLSETVIKPFYYQRVQQTIAIIRRYL-SEERCLIHKPEGAIFLWLWFKD 348 (417)
T ss_dssp -------------------------HHHHHTHHHHHHHHHHHHHHHHHHHC-CTTTCEEECCCBSSEEEEECTT
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHHHhc-ccCCceeeCCCcceEEEEEcCC
Confidence 22333 55666777888888887643 22 3556678999999987654
No 51
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.2e-34 Score=306.56 Aligned_cols=297 Identities=20% Similarity=0.194 Sum_probs=237.4
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+++.|+|+.|.++.. ..+++.+.+++.+.++.. ...+|++..|..+||++++++++ +++++|++ |+|
T Consensus 31 ~~~~i~l~~g~~~~~---~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g------~~~~~v~~--~~g 99 (397)
T 2zyj_A 31 RPGILSFAGGLPAPE---LFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIG------VRPEEVLI--TTG 99 (397)
T ss_dssp STTCEEESSCCCCGG---GCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHT------SCGGGEEE--ESH
T ss_pred CCCceecCCCCCCch---hCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhC------CChhhEEE--ecc
Confidence 457899999887532 224578888877766531 24679888999999999999993 56789999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEE-EeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILF-LQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i-~i~~ 318 (583)
+++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ .++|++.+++.+.+ .+++++ ++++
T Consensus 100 ~~~al~~~---~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~--~~~d~~~l~~~l~~--~~~~~v~~~~~ 171 (397)
T 2zyj_A 100 SQQALDLV---GKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPA-GE--EGPDLDALEEVLKR--ERPRFLYLIPS 171 (397)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEE-ET--TEECHHHHHHHHHH--CCCSCEEECCB
T ss_pred HHHHHHHH---HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCc-CC--CCCCHHHHHHHHhh--cCCeEEEECCC
Confidence 99999985 4445677999999999999999999999999999998 54 35899999998864 244554 6899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhc---CcEEEEecCcccccccCccce
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEV---GQLCLAQSFSKNMGLYGERVG 395 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~---~~vi~i~S~SK~~~l~GlRiG 395 (583)
||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ +.. +++++++||||.++ +|+|+|
T Consensus 172 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~-~~~~~~~~~i~~~s~sK~~~-~G~r~G 247 (397)
T 2zyj_A 172 FQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA--RLPSLFEL-AREAGYPGVIYLGSFSKVLS-PGLRVA 247 (397)
T ss_dssp SCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC--CCCCHHHH-HHHHTCCCEEEEEESTTTTC-GGGCCE
T ss_pred CcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC--CCCchhhh-CcccCCCeEEEEeccccccc-ccceeE
Confidence 999999999999999999999999999999999999988652 23345554 233 78999999999999 999999
Q ss_pred EEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHH
Q psy14428 396 TFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIV 475 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~ 475 (583)
|+++ + +++++++.........+.+.+.|.++..++++..
T Consensus 248 ~~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~---------------------------------- 286 (397)
T 2zyj_A 248 FAVA--H-----PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGF---------------------------------- 286 (397)
T ss_dssp EEEC--C-----HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTH----------------------------------
T ss_pred EEec--C-----HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC----------------------------------
Confidence 9999 6 5789988887666666779999999888887531
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
| ++++++++++.++++.+.+.|++.. |+++....+++|+|.|..++.
T Consensus 287 ------------~-~~~~~~~~~~~~~~~~l~~~L~~~~-~~g~~~~~~~~g~~~~~~~~~ 333 (397)
T 2zyj_A 287 ------------S-ERLERVRRVYREKAQAMLHALDREV-PKEVRYTRPKGGMFVWMELPK 333 (397)
T ss_dssp ------------H-HHHHHHHHHHHHHHHHHHHHHHHHS-CTTSEECCCSBSSEEEEECST
T ss_pred ------------H-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCeEEccCCccEEEEEEcCC
Confidence 2 3355666777888888888888752 323555567889999987753
No 52
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=6.4e-35 Score=311.35 Aligned_cols=304 Identities=13% Similarity=0.067 Sum_probs=231.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHH--HHhccC-CCCCC-CCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAER--RIYEKN-LDHEY-ANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~--~~~~~~-~~~~Y-~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
.+..|||+.|.|++... | +++.+.+++. +..... ...+| ++..|.++||+++|+++. +++++|++ |
T Consensus 24 ~~~~i~l~~g~p~~~~~-~-~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~------~~~~~i~~--t 93 (423)
T 3ez1_A 24 RGLNLNMQRGQPADADF-D-LSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLD------VKAENVLV--W 93 (423)
T ss_dssp HTCCEESCCCCCCHHHH-H-TTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTT------SCGGGEEE--C
T ss_pred CCceEecCCCCCChHhC-C-CcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhC------CChhhEEE--e
Confidence 35679999999863211 1 3346666653 443322 24789 899999999999999983 67889999 9
Q ss_pred CCchhHHH--HHHHHHHHhCC--C---------CCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHH
Q psy14428 238 ISGSGSLR--VGTAFLERFYP--G---------VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 238 ~G~~~al~--l~~~~l~~~~~--~---------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
+|+++++. ++ +..++. + ||+|++++|+|..+...++..|++++.+|+ ++ .++|++.+++.+
T Consensus 94 ~G~~~al~~~~~---~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~--~g~d~~~l~~~l 167 (423)
T 3ez1_A 94 NNSSLELQGLVL---TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDM-QS--DGPDVDAVERLA 167 (423)
T ss_dssp SSCHHHHHHHHH---HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEE-ET--TEECHHHHHHHH
T ss_pred CCcHHHHHHHHH---HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccC-CC--CCCCHHHHHHHH
Confidence 99999997 64 333333 4 599999999999999999999999999999 54 379999999988
Q ss_pred HcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHH-HhcCeEEEEeccCCCCCCCC-CCCchHHHHHH---HHhcCcEE
Q psy14428 305 KAMPERSILFL-QTSSHNPTGVDLSEDQWRQLAVVV-KQRHLYPFFDMAYLGLTSGD-FDKDAFSLRYF---AKEVGQLC 378 (583)
Q Consensus 305 ~~~~~~~~~i~-i~~p~NPTG~~~s~~~~~~l~~~a-~~~~i~iI~De~Y~~l~~~~-~~~~~~~~~~~---~~~~~~vi 378 (583)
++ .+++++++ +|+||||||.+++.+++++|+++| +++|++||+||+|.++.+.+ ......++..+ .+..+++|
T Consensus 168 ~~-~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 246 (423)
T 3ez1_A 168 GT-DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAF 246 (423)
T ss_dssp HS-CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEE
T ss_pred hh-CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEE
Confidence 53 34566664 679999999999999999999999 99999999999999765543 11122234333 24567999
Q ss_pred EEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHH
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD--PKLKAQCDETERIMSQL 456 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l 456 (583)
+++||||+ +++|+|+||+++ + +++++.+.........+++.+.|.++..++++ +.
T Consensus 247 ~~~S~sK~-~~~G~r~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~--------------- 303 (423)
T 3ez1_A 247 VFASTSKI-TFAGAGLGFVAS--S-----EDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGG--------------- 303 (423)
T ss_dssp EEEESTTT-SCSSSSCEEEEE--C-----HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTH---------------
T ss_pred EEeCchhh-ccCCcceEEEEe--C-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccch---------------
Confidence 99999999 579999999999 7 58999999988888889999999999888764 22
Q ss_pred HHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCC-CcccccccccceeecCC
Q psy14428 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDK-GSKK-NWDHITNQKGMFCYTGL 534 (583)
Q Consensus 457 ~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~pg-~~~~~~~~~g~f~~~~l 534 (583)
+.++++++++.+.++++.+.+.|.+. ..-| .+.+..+++|+|.|..+
T Consensus 304 -------------------------------~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~ 352 (423)
T 3ez1_A 304 -------------------------------LEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDT 352 (423)
T ss_dssp -------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEE
T ss_pred -------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEEC
Confidence 22334555566666666666666552 2112 24556789999999877
Q ss_pred Ch
Q psy14428 535 SA 536 (583)
Q Consensus 535 ~~ 536 (583)
+.
T Consensus 353 ~~ 354 (423)
T 3ez1_A 353 AE 354 (423)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 53
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.2e-34 Score=302.39 Aligned_cols=301 Identities=11% Similarity=0.118 Sum_probs=241.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.++|+.|.+.. + +++.+.+++.+.+... ...|++. ..++|+++++++.+.+|+.+++++|++ |+|+
T Consensus 22 ~~~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~--~~g~ 91 (383)
T 3kax_A 22 KNEELIHAWIADMDF--E---VPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVF--SAGI 91 (383)
T ss_dssp SSSCCEECCCSSCSS--C---CCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEE--ESCH
T ss_pred CCCCeeecccccCCC--C---CCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEE--cCCH
Confidence 356889999997642 1 5688888888877653 4667665 689999999999988888889999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC--CCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK--TNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~--~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ +++ ++.+|++.+++.+ .++++++++++
T Consensus 92 ~~a~~~~---~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~l---~~~~~~v~i~~ 164 (383)
T 3kax_A 92 VPALSTS---IQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPL-QKQNDTYAIDFEHLEKQF---QQGVKLMLLCS 164 (383)
T ss_dssp HHHHHHH---HHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC-EEETTEEECCHHHHHHHH---TTTCCEEEEES
T ss_pred HHHHHHH---HHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccc-eecCCcEEEcHHHHHHHh---CcCCeEEEEeC
Confidence 9999985 4456777999999999999999999999999999998 432 2348999999998 56788888999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcccccccCccceEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+. +..++++++.||||.++++|+|+||+
T Consensus 165 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 242 (383)
T 3kax_A 165 PHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADH--THTPFASLSEELAARTITCMAPSKTFNIAGLQASII 242 (383)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--CceeHhhcCccccCcEEEEEEChhhccCcchhheEE
Confidence 999999999999999999999999999999999999998752 222333322 22478999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhcc-ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGF-YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVT 476 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~ 476 (583)
++ ++ +++++.+....... ..+++.++|.++...+++..
T Consensus 243 ~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----------------------------------- 281 (383)
T 3kax_A 243 II--PN----EKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTECN----------------------------------- 281 (383)
T ss_dssp EC--CC----HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTCH-----------------------------------
T ss_pred Ee--CC----HHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhhH-----------------------------------
Confidence 98 65 47888888776544 44788999998888876520
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 477 EILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 477 ~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+.++++++++.+.++.+.+.|++.. || +....++++++.|..++.
T Consensus 282 -------------~~~~~~~~~~~~~~~~l~~~l~~~~-~~-~~~~~~~~~~~~~~~~~~ 326 (383)
T 3kax_A 282 -------------DWLNEIRFYIEDNAKFACEYIKDHI-PT-LSVMKPEGSFLLWIDCSA 326 (383)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHHHHC-TT-CEECCCSBSSEEEEECGG
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHhhC-CC-ceEecCCceEEEEEEccc
Confidence 1144556666788888888888742 32 566778899999887754
No 54
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=8.5e-34 Score=300.00 Aligned_cols=301 Identities=11% Similarity=0.074 Sum_probs=235.8
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.++|+.+.++ .+ +++.+.+++.+.+... ..+|++. .++||+++++++.+.+|+.+++++|++ |+|+++
T Consensus 31 ~~~i~l~~~~~~--~~---~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--t~g~~~ 100 (399)
T 1c7n_A 31 NEVVPLSVADME--FK---NPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIIN--TAGVVP 100 (399)
T ss_dssp TTCCCCCSSSCS--SC---CCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEE--ESSHHH
T ss_pred CCceeeeecCCC--CC---CCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEE--cCCHHH
Confidence 478999998864 22 5678888888777542 4678764 899999999999877777788999999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
++.++ +..+..+||+|++++|+|..+...++..|++++.+|+.+++ ++.+|++.+++.+.+ ++++++++++|||
T Consensus 101 a~~~~---~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~n 175 (399)
T 1c7n_A 101 AVFNA---VREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD--KNNKALLFCSPHN 175 (399)
T ss_dssp HHHHH---HHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC--TTEEEEEEESSBT
T ss_pred HHHHH---HHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc--CCCcEEEEcCCCC
Confidence 99985 44566779999999999999999999999999999983122 134899999998842 5678888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH-hcCcEEEEecCcccccccCccceEEEEE
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK-EVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
|||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+.. ..++++++.||||.+|++|+|+||+++
T Consensus 176 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~- 252 (399)
T 1c7n_A 176 PVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY--EHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIII- 252 (399)
T ss_dssp TTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEEC-
T ss_pred CCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CcccHHHcCccccCcEEEEEeChhhccccchheEEEEE-
Confidence 999999999999999999999999999999999988652 2223333211 147899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccc-cCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 401 TPTSDETERIMSQLKILIRGFY-SNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
++ +++++++........ .+++.+.|.++..++++.
T Consensus 253 -~~----~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~--------------------------------------- 288 (399)
T 1c7n_A 253 -KN----PDIRERFTKSRDATSGMPFTTLGYKACEICYKEC--------------------------------------- 288 (399)
T ss_dssp -CC----HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---------------------------------------
T ss_pred -CC----HHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC---------------------------------------
Confidence 64 368888887665553 367888888887776421
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+.++++++++.++++.+.+.|++. .|| +....++++++.|..++.
T Consensus 289 ---------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~~~~~~~ 334 (399)
T 1c7n_A 289 ---------GKWLDGCIKVIDKNQRIVKDFFEVN-HPE-IKAPLIEGTYLQWIDFRA 334 (399)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHH-CTT-SBCCCCSBSSEEEEECGG
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHHHhh-CCC-CeEecCCceEEEEEEccc
Confidence 0124455666778888888888773 133 556678889999877653
No 55
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=6.4e-34 Score=299.65 Aligned_cols=299 Identities=10% Similarity=0.093 Sum_probs=237.5
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
.++.++|+.|.+... +++.+.+++.+.+.+. ...|++ +..++++++++++.+.+|+.+++++|++ |+|++
T Consensus 31 ~~~~i~l~~~~~~~~-----~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~--~~g~~ 100 (391)
T 4dq6_A 31 TNDLLPMWVADMDFK-----AAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIY--SPGVI 100 (391)
T ss_dssp CSCSEECCSSSCSSC-----CCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred CCCceeccccCCCCC-----CCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEE--cCChH
Confidence 467899999976421 5688989888877643 456655 6799999999999988888888999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEeccc---CCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD---NKTNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d---~~~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
+++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ + +.++.+|++.+++.+ .+ ++++++++
T Consensus 101 ~a~~~~---~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~d~~~l~~~l---~~-~~~v~i~~ 172 (391)
T 4dq6_A 101 PAISLL---INELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPL-QKLENGNYIMDYEDIENKI---KD-VKLFILCN 172 (391)
T ss_dssp HHHHHH---HHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCC-EECTTSCEECCHHHHHHHC---TT-EEEEEEES
T ss_pred HHHHHH---HHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeee-eecCCCceEeeHHHHHHHh---hc-CCEEEEEC
Confidence 999985 4456677999999999999999999999999999998 4 223458999999887 34 88999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcccccccCccceEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+. +..++++++.||||.+|++|+|+||+
T Consensus 173 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 250 (391)
T 4dq6_A 173 PHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH--KHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYV 250 (391)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEE
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC--CccCHHHcCccccCcEEEEEechhhccCcccceEEE
Confidence 999999999999999999999999999999999999988752 222333321 22468999999999999999999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhcc-ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGF-YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVT 476 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~ 476 (583)
++ ++ +++++.+....... ..+++.+.|.++...+++.
T Consensus 251 ~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------------------------------------ 288 (391)
T 4dq6_A 251 VL--PD----EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG------------------------------------ 288 (391)
T ss_dssp EC--CS----HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC------------------------------------
T ss_pred Ee--CC----HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch------------------------------------
Confidence 98 64 37888888765433 4577888888877766421
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 477 EILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 477 ~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
. +.++++++++.++++.+.+.|++.. || +....++++++.|..++.
T Consensus 289 ---------~---~~~~~~~~~~~~~~~~l~~~l~~~~-~~-~~~~~~~~~~~~~~~~~~ 334 (391)
T 4dq6_A 289 ---------E---SWLESFLEYLESNIDFAIKYINENM-PK-LKVRKPEGTYLLWVDFSA 334 (391)
T ss_dssp ---------H---HHHHHHHHHHHHHHHHHHHHHHHHC-TT-SEECCCSBSSEEEEECGG
T ss_pred ---------H---HHHHHHHHHHHHHHHHHHHHHHhhC-CC-CEecCCCccEEEEEEhhh
Confidence 0 1145556677788888888888742 32 566778999999887754
No 56
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1e-33 Score=303.03 Aligned_cols=293 Identities=16% Similarity=0.172 Sum_probs=228.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc----CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK----NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+++.|+|+.|+++.. +++.+.+++.+.... ....+|++..|.++||+++++|+.+ ++.+++++|++
T Consensus 54 ~~~~~i~l~~~~~~~~-----~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~-- 124 (432)
T 3ei9_A 54 PDAQVISLGIGDTTEP-----IPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFV-- 124 (432)
T ss_dssp TTCCCEECSSCCCCSC-----CCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEE--
T ss_pred CCCCeEEccCCCCCCC-----CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEE--
Confidence 3457899999988622 457788887776653 1245798899999999999999983 66788999999
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCC------------eEEEEecccCCCCCCChhhHHHHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRL------------NVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~------------~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
|+|+++++.++ . .+..+||.|++++|+|..+...++..|. +++.+++.++.++..|++.
T Consensus 125 t~G~~~al~~l---~-~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 195 (432)
T 3ei9_A 125 SDGAKCDISRL---Q-VMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST----- 195 (432)
T ss_dssp ESCHHHHHHHH---H-HHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----
T ss_pred CCChHHHHHHH---H-HHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----
Confidence 99999999874 2 2335699999999999999999988884 6788888322222333221
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++..+....+++|+++|||
T Consensus 196 ---~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~---~~~~~~~~~~~~~~i~~~S~S 269 (432)
T 3ei9_A 196 ---VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN---PRSIFEIPGAEEVAMETASFS 269 (432)
T ss_dssp ---CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC---CSSGGGSTTGGGTEEEEEESH
T ss_pred ---CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC---CCChhhcCCCCCeEEEEecch
Confidence 35678888899999999999999999999999999999999999999988752 223333333356899999999
Q ss_pred ccccccCccceEEEEEcCCchhHHHH--------HHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHH
Q psy14428 385 KNMGLYGERVGTFSVLTPTSDETERI--------MSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~~~~~l--------i~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l 456 (583)
|+||++|+|+||+++ ++ ++ ++.+.+.......+++.++|.++..++.+..
T Consensus 270 K~~g~~G~r~G~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--------------- 327 (432)
T 3ei9_A 270 NYAGFTGVRLGWTVI--PK-----KLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEG--------------- 327 (432)
T ss_dssp HHHCTTTTCCEEEEC--CT-----TCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHH---------------
T ss_pred hccCCcccceEEEEE--Ch-----HHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhccc---------------
Confidence 999999999999999 64 34 6777777666777889999998888876411
Q ss_pred HHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 457 KILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 457 ~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.++++++++++.++++.+.+.|++.+ +....+++|+|.|..++
T Consensus 328 --------------------------------~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~ 370 (432)
T 3ei9_A 328 --------------------------------LEAMHKVIGFYKENTNIIIDTFTSLG----YDVYGGKNAPYVWVHFP 370 (432)
T ss_dssp --------------------------------HHHHHHHHHHHHHHHHHHHHHHHHTT----CCEEECSSSSEEEEECT
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHHHHCC----ceecCCCcceEEEEECC
Confidence 01255667777888999999998864 55566778999998876
No 57
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-33 Score=297.88 Aligned_cols=301 Identities=11% Similarity=0.102 Sum_probs=238.7
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+.+.|||+.|.++.. +++.+.+++.+.+... ..+|++. ..++|+++++++.+.+|+++++++|++ |+|++
T Consensus 26 g~~~i~~~~~~~~~~-----~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~--~~g~~ 95 (391)
T 3dzz_A 26 KEKELPMWIAEMDFK-----IAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVF--ASGVV 95 (391)
T ss_dssp CTTCEECCSSCCSSC-----CCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEE--ESCHH
T ss_pred CCCceeccccCCCCC-----CCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEE--CCCHH
Confidence 457899999976422 5688888888877653 5667765 799999999999988888889999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEeccc--CCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD--NKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d--~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ + ..++.+|++.+++.+.+ ++++++++++|
T Consensus 96 ~a~~~~---~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~l~~--~~~~~v~i~~p 169 (391)
T 3dzz_A 96 PAISAM---VRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDL-IYENSKYSVNWADLEEKLAT--PSVRMMVFCNP 169 (391)
T ss_dssp HHHHHH---HHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC-EEETTEEECCHHHHHHHHTS--TTEEEEEEESS
T ss_pred HHHHHH---HHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeee-eecCCceeecHHHHHHHHhc--cCceEEEEECC
Confidence 999985 4445677999999999999999999999999999998 4 22234899999999842 57889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH-hcCcEEEEecCcccccccCccceEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK-EVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
|||||.+++.+++++|+++|+++|++||+||+|.++.+.+. ...++..+.. ..++++++.||||.+|++|+|+||++
T Consensus 170 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~ 247 (391)
T 3dzz_A 170 HNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE--DITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAI 247 (391)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC--CCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEE
T ss_pred CCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC--CceehhhcCccccCcEEEEEeChhhccccchhheEEE
Confidence 99999999999999999999999999999999999988752 2333333221 14689999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhc-cccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 399 VLTPTSDETERIMSQLKILIRG-FYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
+ ++ +++++.+...... ...+++.+.|.++...+++.
T Consensus 248 ~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------------------------------------- 284 (391)
T 3dzz_A 248 I--PN----PDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG------------------------------------- 284 (391)
T ss_dssp C--CS----HHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC-------------------------------------
T ss_pred E--CC----HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc-------------------------------------
Confidence 9 65 4688888776543 34577888888777666421
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+.++++++++.+.++.+.+.|++.. || +....++++++.|..++.
T Consensus 285 -----------~~~~~~~~~~~~~~~~~l~~~l~~~~-~~-~~~~~~~~~~~~~~~~~~ 330 (391)
T 3dzz_A 285 -----------HDWLRELKQVLRDNFAYAREFLAKEV-PE-VKVLDSNASYLAWVDISA 330 (391)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHHHC-TT-SEECCCCBSSEEEEECGG
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHhhC-CC-cEEeccCceEEEEEehhh
Confidence 01245556667788888888888742 32 566778899999877654
No 58
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=6.4e-33 Score=288.34 Aligned_cols=288 Identities=15% Similarity=0.161 Sum_probs=229.6
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
...++.|+|+.+.+.. + +++.+.+++.+.... ...| +..|.++||+++|++++ +++++|++ |+|
T Consensus 13 ~~~~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~~------~~~~~i~~--~~g 76 (354)
T 3ly1_A 13 PSTDNPIRINFNENPL--G---MSPKAQAAARDAVVK--ANRY-AKNEILMLGNKLAAHHQ------VEAPSILL--TAG 76 (354)
T ss_dssp CCSSSCEECSSCCCSS--C---CCHHHHHHHHHTGGG--TTSC-CHHHHHHHHHHHHHHTT------SCGGGEEE--ESH
T ss_pred CCCCceEEccCCCCCC--C---CCHHHHHHHHHHHhh--CcCC-CCCchHHHHHHHHHHhC------CChHHEEE--eCC
Confidence 3456789999998642 1 568889988877754 5667 55689999999999984 56789999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ ++++|++.+++.+.+. ++++++++++|
T Consensus 77 ~~~a~~~~---~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~d~~~l~~~l~~~-~~~~~v~l~~p 150 (354)
T 3ly1_A 77 SSEGIRAA---IEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKM-LD-NWAFDIEGLKAAVAAY-SGPSIVYLVNP 150 (354)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECC-CT-TSCCCHHHHHHHHHTC-SSCEEEEEESS
T ss_pred hHHHHHHH---HHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecC-CC-CCCCCHHHHHHHhccC-CCCCEEEEeCC
Confidence 99999985 4456677999999999999999999999999999998 53 4899999999998531 57889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhc-CcEEEEecCcccccccCccceEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEV-GQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~-~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
|||||.+++.+++++|+++| ++|++||+||+|.++.+++. ....+.. .+.. +++++++||||.+|++|+|+||++
T Consensus 151 ~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~--~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 226 (354)
T 3ly1_A 151 NNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPR--FRSISPM-ITQGAENIILLKTFSKIHAMAGMRVGYAV 226 (354)
T ss_dssp CTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTT--CCCSHHH-HHTTCSSEEEEEESSSTTCCGGGCCEEEE
T ss_pred CCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccc--cCCHHHH-hhhcCCCEEEEeeChhhccChhhhheeee
Confidence 99999999999999999999 89999999999999988752 2223333 3444 899999999999999999999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 399 VLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+ + +++++++...... .+++.+.|.++..++++..
T Consensus 227 ~--~-----~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~------------------------------------- 260 (354)
T 3ly1_A 227 A--H-----PTVIALMGRYVAG--EKINFSGVDAALASMNDSA------------------------------------- 260 (354)
T ss_dssp C--C-----HHHHHHHGGGTTC--SCCCHHHHHHHHHHTTCHH-------------------------------------
T ss_pred c--C-----HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHH-------------------------------------
Confidence 9 6 5889988876654 6889999999988887521
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.++++++++.++++.+.+.|++.+ +... +..|.|.|..++.
T Consensus 261 ------------~~~~~~~~~~~~~~~l~~~l~~~~----~~~~-~~~~~~~~~~~~~ 301 (354)
T 3ly1_A 261 ------------FITYSKKSNDVSRQILLKALEDLK----LPYL-PSEGNFVFHQLVV 301 (354)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHHT----CCBC-CCCSSEEEEECSS
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHCC----CeEC-CCCceEEEEECCC
Confidence 134445556677777777777664 3333 4456677776653
No 59
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.4e-33 Score=296.63 Aligned_cols=290 Identities=19% Similarity=0.184 Sum_probs=233.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.|+|+.|.++. + +++.+.+++.+.+.. ...|++..|.++||+++++++. +++++|++ |+|+++
T Consensus 25 ~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~~------~~~~~v~~--~~g~~~ 89 (381)
T 1v2d_A 25 LGAVNLGQGFPSN--P---PPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEFA------VEPESVVV--TSGATE 89 (381)
T ss_dssp HTCEECCCCSCSS--C---CCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHHT------SCGGGEEE--ESSHHH
T ss_pred CCeEEecCCCCCC--C---CCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhcC------CChhhEEE--cCChHH
Confidence 4679999998742 2 457888888887754 4579888899999999999964 45788999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEeccc--CCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD--NKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d--~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ + ++++++|++.+++.+ .++++++++++||
T Consensus 90 a~~~~---~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~~d~~~l~~~l---~~~~~~v~~~~~~ 162 (381)
T 1v2d_A 90 ALYVL---LQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRL-DLTPEGFRLDLSALEKAL---TPRTRALLLNTPM 162 (381)
T ss_dssp HHHHH---HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-EEETTEEECCHHHHHTTC---CTTEEEEEEESSC
T ss_pred HHHHH---HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeC-CCCCccCCcCHHHHHHhc---CcCCEEEEECCCC
Confidence 99986 4445667999999999999999999999999999998 5 334678999888766 4678899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|+++|++||+||+|.++.++. ...++..+ ..++++++.||||.++++|+|+||+++
T Consensus 163 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~---~~~~~~~~--~~~~~~~~~s~sK~~~~~G~r~G~~~~- 236 (381)
T 1v2d_A 163 NPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGE---RPRRLREF--APERTFTVGSAGKRLEATGYRVGWIVG- 236 (381)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS---CCCCHHHH--CTTTEEEEEEHHHHTTCGGGCCEEEEC-
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCC---CCCCHHHh--cCCCEEEEeechhhcCCcccceEEEEe-
Confidence 999999999999999999999999999999999998732 22344443 457899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++.+.........+++.+.|.++..+++...
T Consensus 237 -~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--------------------------------------- 271 (381)
T 1v2d_A 237 -P-----KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLAR--------------------------------------- 271 (381)
T ss_dssp -C-----TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH---------------------------------------
T ss_pred -C-----HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcc---------------------------------------
Confidence 6 3678888776666667788888888877764311
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+.++++++++++.++++.+.+.|++.+ +....+++|+|.|..++.
T Consensus 272 -------~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~ 316 (381)
T 1v2d_A 272 -------REGFYEALREGYRRRRDLLAGGLRAMG----LRVYVPEGTYFLMAELPG 316 (381)
T ss_dssp -------HTTHHHHHHHHHHHHHHHHHHHHHHTT----CCEECCSBSSEEEEECTT
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHCC----CEecCCCcceEEEEecCh
Confidence 112245566777888888888888743 555667788999987754
No 60
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=2.1e-34 Score=309.38 Aligned_cols=307 Identities=16% Similarity=0.136 Sum_probs=235.9
Q ss_pred CCCCcc-ccCCccccCCCCCCCCChHHHHHHHHHhcc-------C----CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC
Q psy14428 161 PHPKKM-NLGVGAYRGEDGKPYVLPSVKEAERRIYEK-------N----LDHEYANIGGDAKFCKLAAQLAYGEDFPAFK 228 (583)
Q Consensus 161 ~~~~~i-~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-------~----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~ 228 (583)
.+++.| +|+.|.|+. .|.+.+.+.+++.+...+ . ...+|.+..|.++||+++|+|+.+.+|+.++
T Consensus 29 ~~~~~i~~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~ 105 (444)
T 3if2_A 29 KSDQPVNMLGGGNPAK---IDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLT 105 (444)
T ss_dssp HSSSCCEECSCCCCCC---CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCC
T ss_pred cCchhhhccCCCCCCc---ccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCC
Confidence 347889 999998863 122335677777766644 2 1267999999999999999999988899999
Q ss_pred CCCeEEEecCCchhHHHHHHHHHHHhCCCCC--------------EEEEc-CCCChhhHH------HHhhcCCeEEEEec
Q psy14428 229 DNRLAIVQGISGSGSLRVGTAFLERFYPGVK--------------TVYFP-TPTWNGHVR------FCTDSRLNVGAYRY 287 (583)
Q Consensus 229 ~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd--------------~Vlv~-~P~y~~~~~------~~~~~G~~~~~v~~ 287 (583)
+++|++ |+|+++|+.++ +..++.+|| +|+++ +|+|..+.. .+...|.+++.+++
T Consensus 106 ~~~i~~--t~G~t~al~~~---~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (444)
T 3if2_A 106 SENIAL--TNGSQNAFFYL---FNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTH 180 (444)
T ss_dssp GGGEEE--ESSHHHHHHHH---HHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEE
T ss_pred HHHEEE--ecCcHHHHHHH---HHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEeccc
Confidence 999999 99999999985 455666787 78875 999999986 35567888988888
Q ss_pred ccCC----CCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 288 FDNK----TNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 288 ~d~~----~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
|++ ++++|++.+++++++..++++++++++||||||.+++.+++++|+++|+++|++||+||+|..+.......+
T Consensus 181 -~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 259 (444)
T 3if2_A 181 -DGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSD 259 (444)
T ss_dssp -TTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC
T ss_pred -ccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccc
Confidence 432 247899999887433367889999999999999999999999999999999999999999986432210000
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhh
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLK 443 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 443 (583)
.. ....++++++.||||. +++|+|+||+++ + +++++.+.........+++.+.|.++..++++..+.
T Consensus 260 ~~-----~~~~~~~i~~~S~sK~-~~~G~r~G~~~~--~-----~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 326 (444)
T 3if2_A 260 AH-----LNWDNNTILCFSLSKI-GLPGMRTGIIVA--D-----AKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIK 326 (444)
T ss_dssp CC-----CCCCTTEEEEEESTTT-TCGGGCCEEEEC--C-----HHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHH
T ss_pred cc-----ccCCCCEEEEechhhc-cCCCCceEEEEE--C-----HHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchh
Confidence 00 1235789999999997 789999999998 6 689999998888778889999999998888764322
Q ss_pred hhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCC-Cccc
Q psy14428 444 AQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKG-MSNRISSIREELKSKILDKGSKK-NWDH 521 (583)
Q Consensus 444 ~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~-~~~~~~~~r~~l~~~L~~~~~pg-~~~~ 521 (583)
+++++ +++.+.++++.+.+.|++.. ++ .+..
T Consensus 327 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~ 359 (444)
T 3if2_A 327 ----------------------------------------------QLSDNEIKPFYQKQATLAVKLLKQAL-GDYPLMI 359 (444)
T ss_dssp ----------------------------------------------HHHHHTHHHHHHHHHHHHHHHHHHHS-SSSSEEE
T ss_pred ----------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHhc-ccCCceE
Confidence 22333 55566777777777777643 22 3556
Q ss_pred ccccccceeecCCCh
Q psy14428 522 ITNQKGMFCYTGLSA 536 (583)
Q Consensus 522 ~~~~~g~f~~~~l~~ 536 (583)
..+++|+|.|..++.
T Consensus 360 ~~~~~g~~~~~~~~~ 374 (444)
T 3if2_A 360 HKPEGAIFLWLWFKD 374 (444)
T ss_dssp ECCCBSSEEEEEETT
T ss_pred ecCCccEEEEEEcCC
Confidence 678899999986653
No 61
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.9e-33 Score=296.55 Aligned_cols=298 Identities=11% Similarity=0.066 Sum_probs=230.5
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHH-HHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAK-FCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~-Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
++.|+|+.+.++ .+ +++.+.+++.+.+... ..+|++. .++ ||+++|+++.+.+|+.+++++|++ |+|++
T Consensus 28 ~~~i~l~~~~~~--~~---~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~--t~g~~ 97 (390)
T 1d2f_A 28 ADLLPFTISDMD--FA---TAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVY--GPSVI 97 (390)
T ss_dssp --CEECCSSSCS--SC---CCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEE--ESCHH
T ss_pred CCeeEeeecCCC--CC---CCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEE--cCCHH
Confidence 467999988874 22 5678999888877542 4678765 788 999999999887888888999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC--CCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK--TNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~--~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ +.+ ++.+|++.+++.+.. .+++++++++|
T Consensus 98 ~al~~~---~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~d~~~l~~~l~~--~~~~~v~l~~p 171 (390)
T 1d2f_A 98 YMVSEL---IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVAL-EKQADGWFCDMGKLEAVLAK--PECKIMLLCSP 171 (390)
T ss_dssp HHHHHH---HHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEC-EECSSSEECCHHHHHHHHTS--TTEEEEEEESS
T ss_pred HHHHHH---HHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeec-ccCCCccccCHHHHHHHhcc--CCCeEEEEeCC
Confidence 999985 4556777999999999999999999999999999998 433 234899999998842 36788888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....... +.||||.+|++|+|+||+++
T Consensus 172 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~d~--~~s~sK~~~~~G~r~G~~~~ 247 (390)
T 1d2f_A 172 QNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ--PHIPWSNVARGDWAL--LTSGSKSFNIPALTGAYGII 247 (390)
T ss_dssp CTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSS--CCCCGGGTCCSSEEE--EECSHHHHTCGGGCCEEEEE
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcCHHHcchhhHhh--ccCccHhhcccChhheEEEE
Confidence 99999999999999999999999999999999999988652 233333321111022 99999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHh-ccc-cCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 400 LTPTSDETERIMSQLKILIR-GFY-SNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~-~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
++ +++++.+..... ... .+++.+.|.++...+++.
T Consensus 248 --~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------------------------------------- 284 (390)
T 1d2f_A 248 --EN----SSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG------------------------------------- 284 (390)
T ss_dssp --CS----HHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-------------------------------------
T ss_pred --CC----HHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-------------------------------------
Confidence 65 468888877665 333 478888888877766421
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
.+.++++++++.++++.+.+.|++. .|| +....++++++.|..++.
T Consensus 285 -----------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~~~~~~~ 330 (390)
T 1d2f_A 285 -----------APWLDALRIYLKDNLTYIADKMNAA-FPE-LNWQIPQSTYLAWLDLRP 330 (390)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHHH-CSS-CCCCCCSBCSEEEEECGG
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHhh-CCC-CEEecCCccEEEEEEccc
Confidence 0114455666778888888888873 133 555677889998877653
No 62
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.7e-34 Score=317.16 Aligned_cols=302 Identities=10% Similarity=0.023 Sum_probs=223.2
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC-CCCCCHHHHHHHHHHHhCC-CC-CCCC-CCCeEEEecCC
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA-NIGGDAKFCKLAAQLAYGE-DF-PAFK-DNRLAIVQGIS 239 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~Lr~aia~~~~~~-~g-~~~~-~~~I~i~~t~G 239 (583)
..++|+.|.++.+ +++.+.++...+.. ..|+ +..|.++||+++++++... ++ +.++ +++|++ |+|
T Consensus 104 ~~i~l~~g~~~~~-----~~~~v~a~~~~~~~----~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~--t~G 172 (533)
T 3f6t_A 104 DAVNYCHTELGLN-----RDKVVAEWVNGAVA----NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFP--TEG 172 (533)
T ss_dssp HHHHHHHHTTCCC-----HHHHHHHHHHHHHT----CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEE--EEH
T ss_pred hheeccCCCCCcC-----CcHHHHHHHHHHHh----CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEE--ECC
Confidence 4688998888632 33445555444442 3455 8899999999999999655 34 5555 479999 999
Q ss_pred chhHHHHHHHHHHH--hCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEeccc--CCCCCCChhhHHHHHHcCCCCcEEEE
Q psy14428 240 GSGSLRVGTAFLER--FYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD--NKTNGLDFAGMMEDIKAMPERSILFL 315 (583)
Q Consensus 240 ~~~al~l~~~~l~~--~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d--~~~~g~d~~~l~~~l~~~~~~~~~i~ 315 (583)
+++++.++...+.. ++.+||+|++++|+|..+...++..|++++.+++.. ++++++|++.+++.+ .+++++++
T Consensus 173 ~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l---~~~~k~v~ 249 (533)
T 3f6t_A 173 GTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLK---DPSIKALI 249 (533)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHS---CTTEEEEE
T ss_pred HHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHh---CCCCeEEE
Confidence 99999986332111 567799999999999999999999999999998832 345788999998877 56889999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHH-hcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVK-QRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~-~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi 394 (583)
+++||||||.+++.+++++|+++|+ +++++||+||+|.+|.++. .++... ..+++|+++||||++|++|+|+
T Consensus 250 l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~-----~~~~~~--~~~~~i~~~S~SK~~g~~G~Ri 322 (533)
T 3f6t_A 250 VVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF-----KSIYSV--VPYNTMLVYSYSKLFGCTGWRL 322 (533)
T ss_dssp EESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC-----CCHHHH--SGGGEEEEEESHHHHTCGGGCE
T ss_pred EeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc-----cCHhhc--CCCCEEEEecCcccCCCcccce
Confidence 9999999999999999999999999 6899999999999998753 133332 2468999999999999999999
Q ss_pred eEEEEEcCCchhHHHHHHHH--------------------------------HHHHhccccCCChHHHHHHH----HHhC
Q psy14428 395 GTFSVLTPTSDETERIMSQL--------------------------------KILIRGFYSNPPIHGARIVT----EILS 438 (583)
Q Consensus 395 G~lv~~~p~~~~~~~li~~l--------------------------------~~~~~~~~~~~s~~~q~~~~----~~l~ 438 (583)
||+++ ++++..+.+++.+ .........+++.+.|.+++ ..+.
T Consensus 323 G~l~~--~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~ 400 (533)
T 3f6t_A 323 GVIAL--NEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLL 400 (533)
T ss_dssp EEEEE--ESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHT
T ss_pred EEEEE--CcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHh
Confidence 99999 6543223344332 22233344555666665532 2221
Q ss_pred ChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy14428 439 DPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKN 518 (583)
Q Consensus 439 ~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~ 518 (583)
+.+ . .+.|.++++++++++.++|+.|.+.|. .+
T Consensus 401 ~~~--------------------------------------g----~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~---- 433 (533)
T 3f6t_A 401 TST--------------------------------------N----GGSDDPYIDIARKLVSERYDQLHDAMQ-AP---- 433 (533)
T ss_dssp TCB--------------------------------------G----GGTBCHHHHHHHHHHHHHHHHHHHHHT-CC----
T ss_pred hhc--------------------------------------c----ccchHHHHHHHHHHHHHHHHHHHHhcC-CC----
Confidence 000 0 001234577888889999999999986 32
Q ss_pred cccccccccceeecCCC
Q psy14428 519 WDHITNQKGMFCYTGLS 535 (583)
Q Consensus 519 ~~~~~~~~g~f~~~~l~ 535 (583)
+....+++|+|.|.+++
T Consensus 434 ~~~~~~~~g~~~~~~l~ 450 (533)
T 3f6t_A 434 KDETDTNTHYYSLIDIY 450 (533)
T ss_dssp CCCSTTBCCSEEEEEHH
T ss_pred ccccCCCceEEEEEehH
Confidence 56678899999998765
No 63
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.2e-33 Score=291.10 Aligned_cols=284 Identities=16% Similarity=0.099 Sum_probs=226.4
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.|+|+.+++.. + +++.+.+++.+.... ...|++..+ .+||+++|++++ +++++|++ |+|+++
T Consensus 30 ~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~~------~~~~~v~~--~~g~~~ 93 (365)
T 3get_A 30 KEVIKLASNENPF--G---TPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKYK------VQNENIII--GAGSDQ 93 (365)
T ss_dssp SCCEECSSCCCTT--C---SCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHHT------CCGGGEEE--ESSHHH
T ss_pred CceEEecCCCCCC--C---CCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHhC------CCcceEEE--CCCHHH
Confidence 6789999998742 2 568888888887753 567887777 999999999984 46789999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ +.+++ +|++.+++.+ .++++++++++||||
T Consensus 94 a~~~~---~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l---~~~~~~v~~~~p~np 165 (365)
T 3get_A 94 VIEFA---IHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETH---KDEIKLIFLCLPNNP 165 (365)
T ss_dssp HHHHH---HHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHT---TTTEEEEEEESSCTT
T ss_pred HHHHH---HHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHh---CCCCCEEEEcCCCCC
Confidence 99985 4456677999999999999999999999999999998 44556 8899998887 578899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC--CCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS--GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~--~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||.+++.+++++|+++| ++|++||+||+|.++.+ .+. ...+.....+..+++++++||||.+|++|+|+||+++
T Consensus 166 tG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~- 241 (365)
T 3get_A 166 LGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSK--KHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA- 241 (365)
T ss_dssp TCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGG--GCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE-
T ss_pred CCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCc--ccccHhHHhccCCCEEEEeecchHhcCcchheEEEEc-
Confidence 99999999999999998 57999999999999885 321 2223333345678999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 480 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~ 480 (583)
+ +++++++...... .+++.+.|.++..++++.
T Consensus 242 -~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~---------------------------------------- 273 (365)
T 3get_A 242 -N-----ANIISAFYKLRAP--FNVSNLALKAAVAAMDDD---------------------------------------- 273 (365)
T ss_dssp -C-----HHHHHHHHHHSCT--TCSCHHHHHHHHHHHTCH----------------------------------------
T ss_pred -C-----HHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCH----------------------------------------
Confidence 6 5888888876543 468899999988888752
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 481 DPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++++.++++.+.+.|++.+ +... +..|.|.|..++.
T Consensus 274 ---------~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~-~~~~~~~~~~~~~ 315 (365)
T 3get_A 274 ---------EFTEKTLENNFSQMELYKEFAKKHN----IKII-DSYTNFITYFFDE 315 (365)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHTT----CEEC-CCSSSEEEEECSS
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHhCC----CEEC-CCCCeEEEEECCC
Confidence 1134455566777778888887763 3333 3445667776654
No 64
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6.2e-33 Score=294.83 Aligned_cols=294 Identities=15% Similarity=0.134 Sum_probs=234.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.++|+.|.+.. + +++.+.+++ +.+... ...|++..|..+||+++++++...+|+.+++++|++ |+|+
T Consensus 41 ~g~~~i~l~~~~~~~--~---~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~--~~g~ 111 (409)
T 2gb3_A 41 RGVRIHHLNIGQPDL--K---TPEVFFERI-YENKPE-VVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLV--TNGG 111 (409)
T ss_dssp TTCEEEECSSCCCCS--C---CCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEE--ESHH
T ss_pred cCCCEEeccCCCCCC--C---CCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEE--eCCH
Confidence 356789999999842 2 346788888 766543 457998899999999999999988888899999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
++|+.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ +++.+ ++.+++.+ .++++++++++|
T Consensus 112 t~a~~~~---~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~-~~~l~~~l---~~~~~~v~~~~p 183 (409)
T 2gb3_A 112 SEAILFS---FAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTR-RMEEGFAI-PQNLESFI---NERTKGIVLSNP 183 (409)
T ss_dssp HHHHHHH---HHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEEC-CGGGTSCC-CTTGGGGC---CTTEEEEEEESS
T ss_pred HHHHHHH---HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEecc-CCCCCCcc-HHHHHHhh---CcCCeEEEECCC
Confidence 9999986 3445677999999999999999999999999999998 43 23333 67776665 457889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++ +.+..+++++++||||.+|++|+|+||+++
T Consensus 184 ~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~---~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 258 (409)
T 2gb3_A 184 CNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE---FASA--LSIESDKVVVIDSVSKKFSACGARVGCLIT 258 (409)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC---CCCG--GGSCCTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC---CCCc--cccCCCCEEEEecchhccCCccceEEEEEE
Confidence 99999999999999999999999999999999999987641 1122 112246799999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
++ +++++.+........ +++.+.|.++..+++...
T Consensus 259 --~~----~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~-------------------------------------- 293 (409)
T 2gb3_A 259 --RN----EELISHAMKLAQGRL-APPLLEQIGSVGLLNLDD-------------------------------------- 293 (409)
T ss_dssp --SC----HHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCH--------------------------------------
T ss_pred --Cc----HHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccH--------------------------------------
Confidence 63 268888887766555 888999988888775410
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-ccccccceeecCCC
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDH-ITNQKGMFCYTGLS 535 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~-~~~~~g~f~~~~l~ 535 (583)
+.++++++++.++++.+.+.|++.+ +.. ..+++|+|.|..++
T Consensus 294 ----------~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~ 336 (409)
T 2gb3_A 294 ----------SFFDFVRETYRERVETVLKKLEEHG----LKRFTKPSGAFYITAELP 336 (409)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCSBSSEEEEECS
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHcC----ceeeeCCCeeEEEEEEeC
Confidence 1144556666778888888888763 445 56788999997765
No 65
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=2.9e-32 Score=284.42 Aligned_cols=275 Identities=16% Similarity=0.178 Sum_probs=214.8
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
+.|+|+.|++. .++| +.+ + .. ...+|++. +.++||+++|+++. +++++|++ |+|++++
T Consensus 30 ~~i~l~~~~~~--~~~~---~~v--a----~~--~~~~Y~~~-~~~~lr~~la~~~~------~~~~~v~~--~~G~~~a 87 (356)
T 1fg7_A 30 GDVWLNANEYP--TAVE---FQL--T----QQ--TLNRYPEC-QPKAVIENYAQYAG------VKPEQVLV--SRGADEG 87 (356)
T ss_dssp CSEECSSCCCS--SCCC---CCC--C----CC--CTTSCCCS-SCHHHHHHHHHHHT------SCGGGEEE--ESHHHHH
T ss_pred ceEEeeCCCCC--CCCC---HhH--h----hh--hhccCCCc-cHHHHHHHHHHHhC------CChHHEEE--cCCHHHH
Confidence 57899999864 3322 233 1 11 25678765 58999999999993 56789999 9999999
Q ss_pred HHHHHHHHHHhCCCC-CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 244 LRVGTAFLERFYPGV-KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 244 l~l~~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
+.++ +..++.+| |+|++++|+|..+...++..|++++.+|+ + +++++|++.+++.+ . +++++++++||||
T Consensus 88 i~~~---~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i---~-~~~~v~l~~p~np 158 (356)
T 1fg7_A 88 IELL---IRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPT-L-DNWQLDLQGISDKL---D-GVKVVYVCSPNNP 158 (356)
T ss_dssp HHHH---HHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCC-C-TTSCCCHHHHHTSC---T-TEEEEEEESSCTT
T ss_pred HHHH---HHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeC-C-CCCCCCHHHHHHHh---c-CCCEEEEeCCCCC
Confidence 9985 44566779 99999999999999999999999999998 4 34688998887766 3 7889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.+++++|+++|+ ++++||+||+|.++.... ++..+.+..+++++++||||.||++|+|+||+++ +
T Consensus 159 tG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~------~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~--~ 229 (356)
T 1fg7_A 159 TGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQA------SLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA--N 229 (356)
T ss_dssp TCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGG------CSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEE--C
T ss_pred CCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCC------cHHHHHhhCCCEEEEecchHhhcCchhhhEEEEe--C
Confidence 999999999999999999 999999999999987211 1122224457899999999999999999999999 6
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCCh
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDP 482 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~ 482 (583)
+++++++...... +++|.++|.++..++++..+
T Consensus 230 -----~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~---------------------------------------- 262 (356)
T 1fg7_A 230 -----EEVINLLMKVIAP--YPLSTPVADIAAQALSPQGI---------------------------------------- 262 (356)
T ss_dssp -----HHHHHHHHHHSCS--SCSCHHHHHHHHHHTSHHHH----------------------------------------
T ss_pred -----HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCccH----------------------------------------
Confidence 5888888876433 37889999988888864211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 483 KLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 483 ~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
++++++++++.++|+.+.+.|++++ + +....+.+|.|.|..++
T Consensus 263 -------~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~~~ 305 (356)
T 1fg7_A 263 -------VAMRERVAQIIAEREYLIAALKEIP--C-VEQVFDSETNYILARFK 305 (356)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHHST--T-EEEECCCSSSEEEEEET
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHhCC--C-ceEECCCCCeEEEEECC
Confidence 1244556667788888999998753 2 22334667888897765
No 66
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=9.7e-33 Score=292.45 Aligned_cols=289 Identities=17% Similarity=0.131 Sum_probs=215.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc----CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK----NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~----~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
.+++.++|+.|.++. + +++.+.+++.+..+. ....+|++..|.++||+++|+++. +|+ +++++|++
T Consensus 31 ~~~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~~v~~-- 100 (400)
T 3asa_A 31 PQHTVINLSIGDTTQ--P---LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAKEIFI-- 100 (400)
T ss_dssp TTSCCEECSSCCCCC--C---CCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGGGEEE--
T ss_pred CCCceEeccCCCCCC--C---CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHHHEEE--
Confidence 456789999998742 1 457777777766543 124679888999999999999975 455 77899999
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCe-EEEEecccCC-CCCCChhhHHHHHHcCCCCcEEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLN-VGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
|+|+++++.++. ..+ .+||+|++++|+|..+...++..|++ ++.+|+ +++ .+..+++. .++++++
T Consensus 101 ~~G~~~al~~~~---~~~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~l~~--------~~~~~~v 167 (400)
T 3asa_A 101 SDGAKVDLFRLL---SFF-GPNQTVAIQDPSYPAYLDIARLTGAKEIIALPC-LQENAFFPEFPE--------DTHIDIL 167 (400)
T ss_dssp ESCHHHHHHHHH---HHH-CSSCEEEEEESCCHHHHHHHHHTTCSEEEEEEC-CGGGTTCCCCCT--------TCCCSEE
T ss_pred ccChHHHHHHHH---HHc-CCCCEEEECCCCcHHHHHHHHHcCCcceEeccc-chhcCcccChhh--------ccCccEE
Confidence 999999999853 334 45999999999999999999999999 999998 432 22223211 1456788
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi 394 (583)
++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .+.++..+....+++++++||||.+|++|+|+
T Consensus 168 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~Glri 245 (400)
T 3asa_A 168 CLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPS--LPKSIFEIPDARFCAIEINSFSKPLGFAGIRL 245 (400)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTT--SCSSGGGSTTGGGTEEEEEECCGGGTTTTCCC
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCC--CCCchhhCCCCCCceEEEecchhhcCCcchhe
Confidence 8889999999999999999999999999999999999999987641 12233332112457999999999999999999
Q ss_pred eEEEEEcCCchhHHHH-------HHHHHHH-HhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCC
Q psy14428 395 GTFSVLTPTSDETERI-------MSQLKIL-IRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSN 466 (583)
Q Consensus 395 G~lv~~~p~~~~~~~l-------i~~l~~~-~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~ 466 (583)
||+++ ++ ++ ++.+... ....+.+++.+.|.++..++++.
T Consensus 246 G~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-------------------------- 292 (400)
T 3asa_A 246 GWTVI--PQ-----ELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-------------------------- 292 (400)
T ss_dssp EEEEC--CT-----TCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT--------------------------
T ss_pred eEEee--Ch-----hhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH--------------------------
Confidence 99998 63 44 4555432 22334468889888887776532
Q ss_pred CccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecC-CC
Q psy14428 467 PPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTG-LS 535 (583)
Q Consensus 467 ~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~-l~ 535 (583)
+++++++++.++|+.+.+.|++.+ +....+++|+|.|.. ++
T Consensus 293 ------------------------~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~ 334 (400)
T 3asa_A 293 ------------------------PQLEAIHYYRENSDLLRKALLATG----FEVFGGEHAPYLWVKPTQ 334 (400)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHTT----CEEEECSSSSEEEEECCC
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHHHHHCC----CeeeCCCCceEEEEeccC
Confidence 123345556778888888888753 445556788999987 65
No 67
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=8.4e-33 Score=295.01 Aligned_cols=301 Identities=15% Similarity=0.128 Sum_probs=240.2
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+++.++|+.|.++.. +++.+.+++.+.+... ...|++.. .++++++++++.+.+++.+++++|++ |+|++
T Consensus 60 g~~~i~~~~~~~~~~-----~~~~v~~a~~~~~~~~-~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~~~v~~--~~g~~ 129 (421)
T 3l8a_A 60 NPELLQMWVADMDFL-----PVPEIKEAIINYGREH-IFGYNYFN--DDLYQAVIDWERKEHDYAVVKEDILF--IDGVV 129 (421)
T ss_dssp CTTCEECCSSCCCSC-----CCHHHHHHHHHHHHHC-CSSCBCCC--HHHHHHHHHHHHHHHCCCCCGGGEEE--ESCHH
T ss_pred CCCeeecccCCCCCC-----CCHHHHHHHHHHHhcC-CcCCCCCC--HHHHHHHHHHHHHHhCCCCCHHHEEE--cCCHH
Confidence 567899999976422 5688888888777543 56676543 89999999999988888889999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecc-cCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF-DNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+|++++ +..+..+||+|++++|+|..+...++..|.+++.+|+. ++.++.+|++.+++.+.+ ++++++++++||
T Consensus 130 ea~~~a---~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~--~~~~~vil~~p~ 204 (421)
T 3l8a_A 130 PAISIA---LQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID--NNVKIYLLCSPH 204 (421)
T ss_dssp HHHHHH---HHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH--TTEEEEEEESSB
T ss_pred HHHHHH---HHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc--cCCeEEEECCCC
Confidence 999985 44566779999999999999999999999999999983 122345899999999842 578999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcccccccCccceEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
||||.+++++++++|+++|+++|++||+||+|.++.+.+. ...++..+. +..++++++.|+||.+|++|+|+||+++
T Consensus 205 nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~ 282 (421)
T 3l8a_A 205 NPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGN--THHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAII 282 (421)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEc
Confidence 9999999999999999999999999999999999998762 233333322 2347899999999999999999999999
Q ss_pred EcCCchhHHHHHHHHHHHH-hccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 400 LTPTSDETERIMSQLKILI-RGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~-~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
++ +++++.+.... .....+.+.++|.++..+++..
T Consensus 283 --~~----~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~-------------------------------------- 318 (421)
T 3l8a_A 283 --QN----ESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG-------------------------------------- 318 (421)
T ss_dssp --CS----HHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC--------------------------------------
T ss_pred --CC----HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc--------------------------------------
Confidence 75 47888888765 3345578888888887776421
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 479 LSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 479 l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
..| ++++++++.++++.+.+.|++. || +....++++++.|..++.
T Consensus 319 -------~~~---~~~~~~~~~~~~~~l~~~L~~~--~~-i~~~~~~~~~~~~v~~~~ 363 (421)
T 3l8a_A 319 -------KPW---LEELKTVIEGNIKLVIKELEAK--TK-IKVMEPEGTYLVWLDFSA 363 (421)
T ss_dssp -------HHH---HHHHHHHHHHHHHHHHHHHHHH--CS-CEEECCSBSSEEEEECGG
T ss_pred -------HHH---HHHHHHHHHHHHHHHHHHHHhC--CC-ceEeCCCeeEEEEEeccc
Confidence 112 4555666778888888888876 33 566778899999887754
No 68
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=6.8e-32 Score=282.16 Aligned_cols=286 Identities=12% Similarity=0.065 Sum_probs=226.7
Q ss_pred CCCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 160 DPHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 160 ~~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
...++.|+|+.+++.. + +++.+.+++.+........+|++ .|..+||++++++++. . ++++|++ |+|
T Consensus 27 ~~~~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g~----~-~~~~i~~--~~g 93 (367)
T 3euc_A 27 PDSHGLVKLDAMENPY--R---LPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQV----P-AGMEVLL--GNG 93 (367)
T ss_dssp CCCTTCEECCSSCCCC--C---CCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHTC----C-TTCEEEE--EEH
T ss_pred CCCCCeeEccCCCCCC--C---CCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhCC----C-CcceEEE--cCC
Confidence 3456789999998532 2 45788888877765423567865 5899999999999852 2 6789999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ ++++|++.+++.+.. .+++++++++|
T Consensus 94 ~t~a~~~~---~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~--~~~~~v~~~~~ 166 (367)
T 3euc_A 94 SDEIISML---ALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPL-RA-DFTLDRGAMLAAMAE--HQPAIVYLAYP 166 (367)
T ss_dssp HHHHHHHH---HHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEEC-CT-TSCCCHHHHHHHHHH--HCCSEEEEESS
T ss_pred HHHHHHHH---HHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecC-CC-CCCCCHHHHHHHhhc--cCCCEEEEcCC
Confidence 99999985 4556777999999999999999999999999999999 54 578999999998853 15778888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhc--CeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQR--HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~--~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
|||||.+++.+++++|+++|+++ |+++|+||+|.+|...+ ... . .+..++++++.||||. +++|+|+||+
T Consensus 167 ~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~---~~~---~-~~~~~~~i~~~s~sK~-~~~G~r~G~~ 238 (367)
T 3euc_A 167 NNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES---WMS---R-LTDFGNLLVMRTVSKL-GLAGIRLGYV 238 (367)
T ss_dssp CTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC---SGG---G-GGTCTTEEEEEECCCT-TSCSCCEEEE
T ss_pred CCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc---hHH---H-HhhCCCEEEEecchhh-cccccCceee
Confidence 99999999999999999999999 99999999999987543 111 1 2456789999999999 8999999999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTE 477 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~ 477 (583)
++ + +++++++..... .++.+.+.|.++..++++..
T Consensus 239 ~~--~-----~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~------------------------------------ 273 (367)
T 3euc_A 239 AG--D-----PQWLEQLDKVRP--PYNVNVLTEATALFALEHVA------------------------------------ 273 (367)
T ss_dssp EE--C-----HHHHHHHGGGCC--SSCCCHHHHHHHHHHHTTHH------------------------------------
T ss_pred ee--C-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHH------------------------------------
Confidence 99 6 578888876543 45688999998888886511
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCC
Q psy14428 478 ILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLS 535 (583)
Q Consensus 478 ~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~ 535 (583)
.++++++++.+.++.+.+.|+++ || +. ..+..|.|.|..++
T Consensus 274 -------------~~~~~~~~~~~~~~~l~~~l~~~--~g-~~-~~~~~~~~~~~~~~ 314 (367)
T 3euc_A 274 -------------VLDEQAAQLRAERSRVAEGMAAH--GG-VT-VFPSAANFLLARVP 314 (367)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHHHTS--TT-CE-ECCCSSSEEEEECS
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHhC--CC-cE-ECCCCCeEEEEECC
Confidence 13445556677888888888875 33 44 34667788887775
No 69
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=6.2e-32 Score=282.00 Aligned_cols=282 Identities=16% Similarity=0.167 Sum_probs=218.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
..++.|+|+.+++.. + +++.+.+++.+.... ...| |..|..+||++++++++ +++++|++ |+|+
T Consensus 30 ~~~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~~------~~~~~v~~--~~g~ 93 (363)
T 3ffh_A 30 GLTKITKLSSNENPL--G---TSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFYQ------LEEEELIF--TAGV 93 (363)
T ss_dssp TCSCCEECSSCSCTT--C---CCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHHT------CCGGGEEE--ESSH
T ss_pred CCCceEEccCCCCCC--C---CCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHhC------CChhhEEE--eCCH
Confidence 345789999998742 2 567888888775532 4455 56789999999999995 56789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ ++ ++++|++.+++.+ .++++++++++||
T Consensus 94 t~a~~~~---~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i---~~~~~~v~~~~p~ 165 (363)
T 3ffh_A 94 DELIELL---TRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPL-LQ-DGEHDLEGMLNAI---DEKTTIVWICNPN 165 (363)
T ss_dssp HHHHHHH---HHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEEC-CT-TSCCCHHHHHHHC---CTTEEEEEEESSC
T ss_pred HHHHHHH---HHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecC-CC-CCCcCHHHHHHhc---ccCCCEEEEeCCC
Confidence 9999985 4445677999999999999999999999999999999 54 4789999999887 5678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++.+|++.|++ |+++|+||+|.+|.+ +. .. +.....+..+++|++.||||.+|++|+|+||+++
T Consensus 166 nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~--~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~- 239 (363)
T 3ffh_A 166 NPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQ--PE-KHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA- 239 (363)
T ss_dssp TTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SC--CC-CCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE-
T ss_pred CCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-cc--cc-CHHHHhhcCCCEEEEeechhhhcCchhceeeeec-
Confidence 999999999999999998888 999999999999887 31 11 1122234568999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChh-hhhhhhhHHHHHHHHHHHHhh--ccCCCccchhhHHHH
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK-LKAQCDETERIMSQLKILIRG--FYSNPPIHGARIVTE 477 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~l~~~~r~--~~~~~p~~g~~i~~~ 477 (583)
+ +++++++..... ..+.+.+.|.++..++++.. +++..+..++..+.+.+.++. .+...|..|.|+|..
T Consensus 240 -~-----~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~ 311 (363)
T 3ffh_A 240 -D-----KEIIRQLNIVRP--PFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLID 311 (363)
T ss_dssp -C-----HHHHHHHHHTCC--SCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEE
T ss_pred -C-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeEEEEE
Confidence 6 588998887654 46789999999999998643 333333333333334333333 344557778888776
Q ss_pred hcC
Q psy14428 478 ILS 480 (583)
Q Consensus 478 ~l~ 480 (583)
+..
T Consensus 312 ~~~ 314 (363)
T 3ffh_A 312 LGI 314 (363)
T ss_dssp CSS
T ss_pred CCC
Confidence 643
No 70
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=2e-32 Score=301.02 Aligned_cols=350 Identities=10% Similarity=-0.007 Sum_probs=230.5
Q ss_pred ccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHH-hCCCCCC---CCCCCeEEEecCCc
Q psy14428 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLA-YGEDFPA---FKDNRLAIVQGISG 240 (583)
Q Consensus 165 ~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~-~~~~g~~---~~~~~I~i~~t~G~ 240 (583)
.++|+.|.+.. +++.+.+++.+... ..+|+++.|.++||+++++++ .++.+.. .++++|++ |+|+
T Consensus 106 ~i~l~~g~~~~------~~~~~~~al~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~--t~G~ 174 (546)
T 2zy4_A 106 SLSYVRDQLGL------DPAAFLHEMVDGIL---GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFA--VEGG 174 (546)
T ss_dssp HHHHHHHTSCC------CHHHHHHHHHHHHH---TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEE--EEHH
T ss_pred hhecccCCCCC------CChHHHHHHHHhhh---cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEE--ECCH
Confidence 68888888742 33455555544442 367999999999999988765 4333332 25789999 9999
Q ss_pred hhHHHHHHHHHH--HhCCCCCEEEEcCCCChhhHHHHhh--cCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEE
Q psy14428 241 SGSLRVGTAFLE--RFYPGVKTVYFPTPTWNGHVRFCTD--SRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFL 315 (583)
Q Consensus 241 ~~al~l~~~~l~--~~~~~gd~Vlv~~P~y~~~~~~~~~--~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~ 315 (583)
++++.++...+. .++.+||+|++++|+|+.|...+.. .|++++.+++ +++ ++.+|++.+++.+ .+++++++
T Consensus 175 ~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~~---~~~~k~v~ 250 (546)
T 2zy4_A 175 TAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINA-DPSLNWQYPDSELDKLK---DPAIKIFF 250 (546)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEEC-BGGGTTBCCHHHHGGGG---STTEEEEE
T ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEec-CcccCCCCCHHHHHHhh---CCCCeEEE
Confidence 999998643321 1466799999999999999987554 4789999998 443 3568998887655 56789999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHH--HhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVV--KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a--~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR 393 (583)
++|||||||.+++.+++++|+++| ++++++||+||+|.+|.++. .++... ..+++|+++||||++|+||+|
T Consensus 251 l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~-----~s~~~~--~~~~~i~~~S~SK~~g~~GlR 323 (546)
T 2zy4_A 251 CVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDF-----QSLFAI--CPENTLLVYSFSKYFGATGWR 323 (546)
T ss_dssp EESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTC-----CCHHHH--CGGGEEEEEESTTTTTCGGGC
T ss_pred EECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccC-----cCHHHh--CCCCEEEEEeCccccCCCCcc
Confidence 999999999999999999999999 78999999999999998642 233332 236899999999999999999
Q ss_pred ceEEEEEcCCchhHHHHHHHHHHH------------------------------------HhccccCCChHHHHHH----
Q psy14428 394 VGTFSVLTPTSDETERIMSQLKIL------------------------------------IRGFYSNPPIHGARIV---- 433 (583)
Q Consensus 394 iG~lv~~~p~~~~~~~li~~l~~~------------------------------------~~~~~~~~s~~~q~~~---- 433 (583)
+||+++ +++ ++++++.+. ......++|.+.|.++
T Consensus 324 iG~~~~--~~~----~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a 397 (546)
T 2zy4_A 324 LGVVAA--HQQ----NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFS 397 (546)
T ss_dssp EEEEEE--ESS----CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHH
T ss_pred eEEEEE--CCH----HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHH
Confidence 999999 642 255555211 0123457889999874
Q ss_pred -HHHhCChhhhhhhhhHHHHHHHHHHHHhhc----cC-CCccchhhHHHHhcC-----ChhHHHHHHHHHHHHHHHHHHH
Q psy14428 434 -TEILSDPKLKAQCDETERIMSQLKILIRGF----YS-NPPIHGARIVTEILS-----DPKLKAQWFEECKGMSNRISSI 502 (583)
Q Consensus 434 -~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~----~~-~~p~~g~~i~~~~l~-----~~~~~~~~~~~l~~~~~~~~~~ 502 (583)
+.++++. +.+.+..++.+.++.+.+... +. .+|.+|.|+|..+.. +......|... .. ..
T Consensus 398 ~~all~~~--~~~~~~~r~~~~~r~~~l~~~L~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~------~~-~~ 468 (546)
T 2zy4_A 398 LFALMDEA--DEYKHTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVK------QS-ST 468 (546)
T ss_dssp HHHHHCTT--CHHHHHHHHHHHHHHHHHHGGGTSSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHH------HC-CH
T ss_pred HHHHHhcc--HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhc------cC-CH
Confidence 3556542 334445555555555543322 22 345566666665421 01112233210 00 11
Q ss_pred HHHHHHHHHhc---CCCCCcccccccccceeecCCChhhhhhhhhhhhHHHHH
Q psy14428 503 REELKSKILDK---GSKKNWDHITNQKGMFCYTGLSASQGMSNRISSIREELK 552 (583)
Q Consensus 503 r~~l~~~L~~~---~~pg~~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~~~~~ 552 (583)
.+.+.+.+.+. ..||..-......-++++...++++++++ +.++++.+.
T Consensus 469 ~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~-~~~l~~~l~ 520 (546)
T 2zy4_A 469 GDMLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAI-GRALRKMAD 520 (546)
T ss_dssp HHHHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHH-HHHHHHHHH
Confidence 23344455443 34665222223345777877677777552 233444433
No 71
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1.1e-33 Score=299.10 Aligned_cols=289 Identities=15% Similarity=0.083 Sum_probs=211.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhc--c-CCCCCCCCCCCC-----HHHHHHHHHHHhCCCCCCCCC-CC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYE--K-NLDHEYANIGGD-----AKFCKLAAQLAYGEDFPAFKD-NR 231 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~--~-~~~~~Y~~~~G~-----~~Lr~aia~~~~~~~g~~~~~-~~ 231 (583)
..++.|+|+.|.++.. +++.+.+++.+... . ....+|++..|. ++||++||+|++ .+|+.+++ ++
T Consensus 20 ~~~~~i~l~~g~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~ 93 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAY-----EEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRY 93 (391)
T ss_dssp TTTSCEECSSCCCGGG-----HHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSE
T ss_pred CCCCeeEcCCCCCCCC-----CCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCe
Confidence 4567899999998631 23445554422221 1 135679999999 999999999998 57888887 59
Q ss_pred eEEEecCCchhHHHHHHHHHHHhCCCCC----EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 232 LAIVQGISGSGSLRVGTAFLERFYPGVK----TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 232 I~i~~t~G~~~al~l~~~~l~~~~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
|++ |+|+++++.++. ..++++|| +|++++|+|+.|...++..|++++.+++ |.+ +++
T Consensus 94 i~~--t~G~~~al~~~~---~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~--~l~----------- 154 (391)
T 3bwn_A 94 IVV--GTGSTQLCQAAV---HALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEG-DAW--GFD----------- 154 (391)
T ss_dssp EEE--EEHHHHHHHHHH---HHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEE-EST--TCC-----------
T ss_pred EEE--eCChHHHHHHHH---HHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecC-CHH--HcC-----------
Confidence 999 999999999863 34455699 9999999999999999999999999998 553 332
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc
Q psy14428 308 PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 387 (583)
.+++++++++|||||||.+++ +|++.+.+++++||+||+|.+ +. ..++. ...+++|+++||||+|
T Consensus 155 ~~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~~----~~~l~---~~~~~~i~~~S~SK~~ 219 (391)
T 3bwn_A 155 KKGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---PH----YTPIT---RRQDHDIMLFTFSKIT 219 (391)
T ss_dssp CCSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS---TT----TSCCC---CCBCCSEEEEEHHHHH
T ss_pred CCCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---CC----CCccc---cCCCCeEEEEechhhc
Confidence 246788889999999999997 354422223399999999974 11 11121 1357899999999999
Q ss_pred cccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCC
Q psy14428 388 GLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNP 467 (583)
Q Consensus 388 ~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~ 467 (583)
|+||+|+||+++ ++ +++++++...+.....++|.++|.++..+++++.- .
T Consensus 220 g~~GlRiG~~~~--~~----~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~----------------~-------- 269 (391)
T 3bwn_A 220 GHAGSRIGWALV--KD----KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKE----------------T-------- 269 (391)
T ss_dssp SCGGGCEEEEEE--CC----HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH----------------H--------
T ss_pred CCCccceEEEEe--cC----HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcch----------------h--------
Confidence 999999999997 54 57999999888777789999999999988865210 0
Q ss_pred ccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-------------cccccceeecCC
Q psy14428 468 PIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHI-------------TNQKGMFCYTGL 534 (583)
Q Consensus 468 p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~-------------~~~~g~f~~~~l 534 (583)
+.+. +.+.++++++++.+.++|+.+.+.|++. || +.+. .+++|+|.|..+
T Consensus 270 -----------~~~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~p~~~~~~f~~~~~~~~g~~~~~~~ 332 (391)
T 3bwn_A 270 -----------CKSE---SESENFFKYGREMMKNRWEKLREVVKES--DA-FTLPKYPEAFCNYFGKSLESYPAFAWLGT 332 (391)
T ss_dssp -----------TTCC---CTTTSHHHHHHHHHHHHHHHHHHHHHTC--SS-EECCCCCCEEETTTTEEECCCCSEEEEEE
T ss_pred -----------cccc---ccHHHHHHHHHHHHHHHHHHHHHHHHhC--CC-cccccCCccccccccccCCCcceEEEecC
Confidence 0000 0012346778888899999999999885 22 2221 256788999887
Q ss_pred Ch
Q psy14428 535 SA 536 (583)
Q Consensus 535 ~~ 536 (583)
+.
T Consensus 333 ~~ 334 (391)
T 3bwn_A 333 KE 334 (391)
T ss_dssp SS
T ss_pred Cc
Confidence 64
No 72
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=7.6e-32 Score=282.62 Aligned_cols=259 Identities=15% Similarity=0.111 Sum_probs=213.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS 278 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~ 278 (583)
..+|.+..|.++||+++++++. .+++++|++ |+|+++|+.++ +..+..+||+|++++|+|..+...++..
T Consensus 56 ~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~--~~g~~~a~~~~---~~~l~~~gd~Vl~~~~~~~~~~~~~~~~ 125 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQ--TNGATGANLLV---LYSLIEPGDHVISLYPTYQQLYDIPKSL 125 (375)
T ss_dssp CCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEE--ESHHHHHHHHH---HHHHCCTTCEEEEEESSCTHHHHHHHHT
T ss_pred CcCCCCCCChHHHHHHHHHHhc-----cCChhhEEE--cCChHHHHHHH---HHHhcCCCCEEEEeCCCchhHHHHHHHc
Confidence 6789999999999999999874 367889999 99999999985 4456777999999999999999999999
Q ss_pred CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCC
Q psy14428 279 RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG 358 (583)
Q Consensus 279 G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~ 358 (583)
|++++.+|+..++++.+|++.+++.+ .++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.++
T Consensus 126 g~~~~~v~~~~~~~~~~d~~~l~~~l---~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~ 202 (375)
T 3op7_A 126 GAEVDLWQIEEENGWLPDLEKLRQLI---RPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL 202 (375)
T ss_dssp TCEEEEEEEEGGGTTEECHHHHHHHC---CTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred CCEEEEEeccccCCCCCCHHHHHHhh---ccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence 99999999832334558999998887 567888999999999999999999999999999999999999999999876
Q ss_pred CCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+ ..++. +..+++++++||||.+|++|+|+||+++ + +++++++.........+.+.+.|.++...++
T Consensus 203 ~----~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~v~~--~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (375)
T 3op7_A 203 D----VPSII---EVYDKGIAVNSLSKTYSLPGIRIGWVAA--N-----HQVTDILRDYRDYTMICAGVFDDLVAQLALA 268 (375)
T ss_dssp C----CCCHH---HHCTTEEEEEESSSSSSCGGGCCEEEEC--C-----HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred C----CCchh---hhcCCEEEEeEChhhcCCcccceEEEEe--C-----HHHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence 3 12232 3467899999999999999999999998 6 6899999888777777888888888777664
Q ss_pred ChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy14428 439 DPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKN 518 (583)
Q Consensus 439 ~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~ 518 (583)
+ +.+.++++++++.++++.+.+.|++. | .
T Consensus 269 ~------------------------------------------------~~~~~~~~~~~~~~~~~~l~~~l~~~--~-~ 297 (375)
T 3op7_A 269 H------------------------------------------------YQEILERNRHILEENLAILDQWIEEE--P-L 297 (375)
T ss_dssp T------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHC--T-T
T ss_pred c------------------------------------------------cHHHHHHHHHHHHHHHHHHHHHHhhC--C-C
Confidence 3 11224555666677888888888773 2 2
Q ss_pred cccccccccceeecCCC
Q psy14428 519 WDHITNQKGMFCYTGLS 535 (583)
Q Consensus 519 ~~~~~~~~g~f~~~~l~ 535 (583)
+....+++|++.|..++
T Consensus 298 ~~~~~~~~~~~~~~~~~ 314 (375)
T 3op7_A 298 VSYIRPAVVSTSFVKIA 314 (375)
T ss_dssp EEECCCSSSSCEEEEEC
T ss_pred ceEecCCCeEEEeEEcC
Confidence 45567888888886554
No 73
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=8.8e-35 Score=307.21 Aligned_cols=301 Identities=13% Similarity=0.113 Sum_probs=233.2
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.++|+.|+++. + +++.+.+++.+.+... ..+|++. ..+||+++++++.+.+|+.+++++|++ |+|+++
T Consensus 31 ~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--~~g~~~ 100 (392)
T 3b1d_A 31 PQLLPAWIADMDF--E---VMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVF--VEGVVP 100 (392)
Confidence 3678999998842 2 4467777776666432 4567765 899999999999988888889999999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCC-CCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~-~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
++.++ +..+..+||+|++++|+|..+...++..|++++.+|+.+++ ++.+|++.+++.+.+ .+++++++++|||
T Consensus 101 a~~~~---~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~~~~~v~~~~~~n 175 (392)
T 3b1d_A 101 AISIA---IQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE--NDVKLYLLCNPHN 175 (392)
Confidence 99985 44456679999999999999999999999999999882121 244889998887742 4567888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-cCcEEEEecCcccccccCccceEEEEE
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
|||.+++.+++++|+++|++++++||+||+|.++.+++ ....++..+... .+++++++||||.+|++|+|+||+++
T Consensus 176 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~- 252 (392)
T 3b1d_A 176 PGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFG--HEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAII- 252 (392)
Confidence 99999999999999999999999999999999999875 233445444222 57899999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhccc-cCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhc
Q psy14428 401 TPTSDETERIMSQLKILIRGFY-SNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l 479 (583)
++ +++++.+........ .+++.++|.++..++++. +
T Consensus 253 -~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~------------------------------------ 289 (392)
T 3b1d_A 253 -EN----PTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG--K------------------------------------ 289 (392)
Confidence 64 248888887665553 356888888777776541 0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 480 SDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
++++++++++.++++.+.+.|++.. || +....++++++.|..++.
T Consensus 290 ----------~~~~~~~~~~~~~~~~l~~~l~~~~-~~-~~~~~~~~~~~~~i~~~~ 334 (392)
T 3b1d_A 290 ----------PWLVALKAVLEENIQFAVEYFAQEA-PR-LKVMKPQGTYLIWLDFSD 334 (392)
Confidence 1134455566677777777776621 32 556678899999987754
No 74
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.97 E-value=3.4e-31 Score=275.18 Aligned_cols=270 Identities=13% Similarity=0.114 Sum_probs=206.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+++.+||+.+.+... +++.+.+++.+.... ...|++..+ ++||+++|+++. +++++|++ |+|++
T Consensus 14 g~~~id~~~~~~~~~-----~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~~------~~~~~i~~--t~g~~ 77 (350)
T 3fkd_A 14 SSEIVNFSTTVWTDG-----DKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRNS------VDNNAILV--TNGPT 77 (350)
T ss_dssp --CCEECSCCSCCCS-----CCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHTT------CCGGGEEE--ESHHH
T ss_pred cccEEEccCCCCCCC-----CCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHH
Confidence 467899999986422 567888888776632 567888777 999999999974 56889999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
+++.++ +..+. ||+|++++|+|..+...++..|++++.+|+.+ +..++++ ++++++++++|||
T Consensus 78 ~al~~~---~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~-----------~~~~~v~i~~p~n 140 (350)
T 3fkd_A 78 AAFYQI---AQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNE-DIGEADF-----------SNMDFCWLCNPNN 140 (350)
T ss_dssp HHHHHH---HHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTS-CGGGSCC-----------TTCSEEEEESSCT
T ss_pred HHHHHH---HHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCC-ccccCcc-----------CCCCEEEEeCCCC
Confidence 999985 44444 89999999999999999999999999999822 2134443 4677888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEc
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
|||.+++.+++++|+++|.++ +||+||+|.++.+++. .. . .. .+..+++++++||||.++++|+|+||+++
T Consensus 141 ptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~--~~-~-~~-~~~~~~~i~~~S~sK~~~~~G~r~G~~~~-- 211 (350)
T 3fkd_A 141 PDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEV--IR-P-AD-IKGRKNLVMVYSFSHAYGIPGLRIGYIVA-- 211 (350)
T ss_dssp TTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCC--CC-G-GG-GTTCSSEEEEEESHHHHSCGGGCCEEEEC--
T ss_pred CcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcc--hh-h-HH-hhcCCCEEEEecCchhccCcchheEeEEe--
Confidence 999999999999999998765 9999999999988752 11 1 11 34568999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChh-hhhhhhhHHHHHHHHHHHHhh--ccCCCccchhhHHHHh
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK-LKAQCDETERIMSQLKILIRG--FYSNPPIHGARIVTEI 478 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~l~~~~r~--~~~~~p~~g~~i~~~~ 478 (583)
+ +++++++..... ..+++.++|.++..++++.. +.++.++..+..+.+.+.++. .+...|..|.|+|+.+
T Consensus 212 ~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 284 (350)
T 3fkd_A 212 N-----KDFMKRVAAFST--PWAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSGTTFFLLRL 284 (350)
T ss_dssp C-----HHHHHHHHTTCC--TTCSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEECCCSSSEEEEEE
T ss_pred C-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEECCCCCcEEEEEC
Confidence 6 689998887653 45789999999999988654 444333333333333333332 3445677788887666
Q ss_pred cC
Q psy14428 479 LS 480 (583)
Q Consensus 479 l~ 480 (583)
..
T Consensus 285 ~~ 286 (350)
T 3fkd_A 285 KK 286 (350)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 75
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=1.2e-30 Score=271.73 Aligned_cols=238 Identities=13% Similarity=0.146 Sum_probs=191.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+++.|||+.|.+.. + +++.+.+++.+.... ...| +..|..+||+++++++. +++++|++ |+|+
T Consensus 24 ~~~~~idl~~~~~~~--~---~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~~------~~~~~i~~--~~g~ 87 (361)
T 3ftb_A 24 KGRELLDYSSNINPL--G---IPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYLK------LKDIGIVL--GNGA 87 (361)
T ss_dssp ----CEETTCCCCTT--C---SCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHHT------CCSCEEEE--ESSH
T ss_pred CCCCEEEecCCCCCC--C---CCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHhC------CCcceEEE--cCCH
Confidence 456789999997642 2 457888887777654 4567 55789999999999994 56789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..+ |+|++++|+|..+...++..|++++.+|+ +++ .+++++.+++.+ .+ ++++++++||
T Consensus 88 t~al~~~---~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~~~l~~~l---~~-~~~v~i~~p~ 154 (361)
T 3ftb_A 88 SEIIELS---ISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYL-DEN-MCIDYEDIISKI---DD-VDSVIIGNPN 154 (361)
T ss_dssp HHHHHHH---HTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEEC-CTT-SCCCHHHHHHHT---TT-CSEEEEETTB
T ss_pred HHHHHHH---HHHc----CcEEEecCChHHHHHHHHHcCCeEEEeec-Ccc-cCCCHHHHHHhc---cC-CCEEEEeCCC
Confidence 9999985 3333 89999999999999999999999999998 443 477888888877 34 7889999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++++|+++|+++|+++|+||+|.++.++. .. +.....+..+++++++||||.+|++|+|+||++.
T Consensus 155 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~- 229 (361)
T 3ftb_A 155 NPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDP---SS-SFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGIT- 229 (361)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCT---TS-SSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEE-
T ss_pred CCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCc---cc-chhHhcccCCCEEEEeeChhhcCCCCcceeEEEe-
Confidence 999999999999999999999999999999999998852 11 1112234567899999999999999999999994
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
.+ +++++.+..... ..+.+.+.|.++..++++
T Consensus 230 -~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 261 (361)
T 3ftb_A 230 -NN----KEIAAKIKAKQN--PWNINCFAEMAAINCLKD 261 (361)
T ss_dssp -SC----HHHHHHHHTTSC--TTCSCHHHHHHHHHTSSC
T ss_pred -CC----HHHHHHHHhhCC--CCCCCHHHHHHHHHHhcC
Confidence 33 578888876544 357888889888888875
No 76
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=2.7e-30 Score=269.98 Aligned_cols=237 Identities=14% Similarity=0.139 Sum_probs=189.5
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.+.|||+.|.+. .+ +++.+.+++.+.... ..+|++ .|..+||+++++++. +++++|++ |+|+++
T Consensus 24 ~~~idl~~~~~~--~~---~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~~------~~~~~v~~--~~g~~~ 87 (364)
T 1lc5_A 24 DQLLDFSANINP--LG---MPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHHQ------VPASWILA--GNGETE 87 (364)
T ss_dssp GGSEECSSCCCT--TC---CCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHHT------SCGGGEEE--ESSHHH
T ss_pred cceEEeccccCC--CC---CCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHHC------cCHHHEEE--CCCHHH
Confidence 467999998853 22 457888888777643 456855 589999999999994 45789999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCC-hhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLD-FAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d-~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
++.++ +..+ + ||+|++++|+|..+...++..|++++.+|+ +++ .+++ ++.+.+.+ .++++++++++|||
T Consensus 88 al~~~---~~~~-~-gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~-~~~~~l~~~~~~~---~~~~~~v~i~~p~n 157 (364)
T 1lc5_A 88 SIFTV---ASGL-K-PRRAMIVTPGFAEYGRALAQSGCEIRRWSL-REA-DGWQLTDAILEAL---TPDLDCLFLCTPNN 157 (364)
T ss_dssp HHHHH---HHHH-C-CSEEEEEESCCTHHHHHHHHTTCEEEEEEC-CGG-GTTCCCTTHHHHC---CTTCCEEEEESSCT
T ss_pred HHHHH---HHHc-C-CCeEEEeCCCcHHHHHHHHHcCCeEEEEeC-Ccc-cccchhHHHHHhc---cCCCCEEEEeCCCC
Confidence 99986 3344 4 799999999999999999999999999998 432 2344 35454443 45678888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE-EE
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS-VL 400 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv-~~ 400 (583)
|||.+++.+++++|+++|+++|++||+||+|.++.+++ .+... +.+..++++++.||||.+|++|+|+||++ +
T Consensus 158 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~- 231 (364)
T 1lc5_A 158 PTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE--TGFIP---ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNS- 231 (364)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTC--CCSGG---GCTTCTTEEEEEESTTTTTCTTTCCEEEECC-
T ss_pred CCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCc--cchhh---HhccCCCEEEEEECchhhcCCccceEEEEEC-
Confidence 99999999999999999999999999999999998753 12111 12345789999999999999999999999 7
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++++..... ..++|.++|.++..++++
T Consensus 232 -~-----~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~ 262 (364)
T 1lc5_A 232 -D-----DAAMARMRRQQM--PWSVNALAALAGEVALQD 262 (364)
T ss_dssp -C-----HHHHHHHHHHSC--TTCSCHHHHHHHHHGGGC
T ss_pred -C-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHHhC
Confidence 5 578888876543 457888999988888865
No 77
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.97 E-value=1.3e-30 Score=272.92 Aligned_cols=242 Identities=15% Similarity=0.126 Sum_probs=193.5
Q ss_pred ccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 165 ~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.|||+.|.+. .+ +++.+.+++.+.+... ...+|++..+ .+||+++++++.+.+|..+++++|++ |+|+++
T Consensus 32 ~idl~~~~~~--~~---~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~--~~G~~~ 103 (369)
T 3cq5_A 32 DIRLNTNENP--YP---PSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWA--ANGSNE 103 (369)
T ss_dssp SEECSSCCCC--SC---CCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEE--ESHHHH
T ss_pred ceeccCCCCC--CC---CCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEE--CCChHH
Confidence 4899988873 22 4577888777666431 2567877666 79999999999887778888999999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..+..+||+|++++|+|..+...++..|++++.+|. ++ ++++|++.+++.+.. .+++++++++||||
T Consensus 104 al~~~---~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~--~~~~~v~~~~~~np 176 (369)
T 3cq5_A 104 ILQQL---LQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSR-GA-DFRIDMDVALEEIRA--KQPDIVFVTTPNNP 176 (369)
T ss_dssp HHHHH---HHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEEC-CT-TSSCCHHHHHHHHHH--HCCSEEEEESSCTT
T ss_pred HHHHH---HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecC-Cc-CCCCCHHHHHHHhhc--cCCCEEEEeCCCCC
Confidence 99985 4456677999999999999999999999999999997 43 468999999998853 15677888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcC-cEEEEecCcccccccCccceEEEEEc
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVG-QLCLAQSFSKNMGLYGERVGTFSVLT 401 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~-~vi~i~S~SK~~~l~GlRiG~lv~~~ 401 (583)
||.+++.+++.+|++.| +++||+||+|.++.++. +. ..+.+..+ +++++.||||.+|++|+|+||+++
T Consensus 177 tG~~~~~~~l~~l~~~~---~~~li~De~~~~~~~~~---~~---~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-- 245 (369)
T 3cq5_A 177 TGDVTSLDDVERIINVA---PGIVIVDEAYAEFSPSP---SA---TTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA-- 245 (369)
T ss_dssp TCCCCCHHHHHHHHHHC---SSEEEEECTTGGGCCSC---CG---GGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEE--
T ss_pred CCCCCCHHHHHHHHHhC---CCEEEEECCchhhcCCc---ch---HHHHhhCCCCEEEEEechHhcCCcccceEEEEe--
Confidence 99999998888877755 49999999999988642 11 11123345 899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 402 PTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 402 p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++++..... .++++.+.|.++..++++
T Consensus 246 ~-----~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~ 276 (369)
T 3cq5_A 246 N-----PAFIDAVMLVRL--PYHLSALSQAAAIVALRH 276 (369)
T ss_dssp C-----THHHHHHHTTSC--TTCSCHHHHHHHHHHHHT
T ss_pred C-----HHHHHHHHHcCC--CCCCCHHHHHHHHHHhcC
Confidence 6 368888876543 346888888888887764
No 78
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.97 E-value=1.4e-30 Score=268.97 Aligned_cols=268 Identities=15% Similarity=0.171 Sum_probs=202.8
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
++.++|+.+.+.. + +++.+.+++.+.........|++ .|.++||+++|+++++. .+++++|++ |+|+++
T Consensus 19 ~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~--~~G~~~ 87 (335)
T 1uu1_A 19 RDKTYLALNENPF--P---FPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSV--GNGADE 87 (335)
T ss_dssp CCSEEESSCCCSS--C---CCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEE--ESSHHH
T ss_pred CcceECCCCCCCC--C---CCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEE--cCChHH
Confidence 3568898888631 1 45788888887763322456755 47999999999999754 567899999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
++.++ +..+ ||+|+++ |+|..+...++..|++++.+|+ ++ ++++|++.+ ++++++++++||||
T Consensus 88 al~~~---~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l--------~~~~~v~l~~p~np 150 (335)
T 1uu1_A 88 IIYVM---MLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPL-TK-DLRIPEVNV--------GEGDVVFIPNPNNP 150 (335)
T ss_dssp HHHHH---HHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCC-CT-TSCCCCCCC--------CTTEEEEEESSCTT
T ss_pred HHHHH---HHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEecc-CC-CCCCCHHHc--------CCCCEEEEeCCCCC
Confidence 99985 3444 7999999 9999999999999999999998 43 367787766 35788888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcC
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTP 402 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p 402 (583)
||.+++.+++++|+++| + +||+||+|.++.++. ... +.+..+++++++||||.+|++|+|+||+++ +
T Consensus 151 tG~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~~----~~~---~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~--~ 217 (335)
T 1uu1_A 151 TGHVFEREEIERILKTG---A-FVALDEAYYEFHGES----YVD---FLKKYENLAVIRTFSKAFSLAAQRVGYVVA--S 217 (335)
T ss_dssp TCCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCCC----CGG---GGGTCSSEEEEEESTTTTTCGGGCCEEEEE--C
T ss_pred CCCCCCHHHHHHHHHhC---C-EEEEECcchhhcchh----HHH---HhhhCCCEEEEecchhhcCCcccCeEEEEe--C
Confidence 99999999999999887 7 899999999876431 111 124457899999999999999999999999 6
Q ss_pred CchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCCh-hhhhhhhhHHHHHHHHHHHHhh-ccCCCccchhhHHHHh
Q psy14428 403 TSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDP-KLKAQCDETERIMSQLKILIRG-FYSNPPIHGARIVTEI 478 (583)
Q Consensus 403 ~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~l~~~~r~-~~~~~p~~g~~i~~~~ 478 (583)
+++++++..... ..++|.++|.++..++++. ++++..+..++..+.+.+.++. .+...|.+|.|+|..+
T Consensus 218 -----~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 288 (335)
T 1uu1_A 218 -----EKFIDAYNRVRL--PFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFM 288 (335)
T ss_dssp -----HHHHHHHHHHSC--TTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCCSSEEEEEC
T ss_pred -----HHHHHHHHHhcC--CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCcEEcCCCCeEEEEEC
Confidence 578888887643 2588999999999999874 2333333333333333222222 3444566778877654
No 79
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=2e-29 Score=259.94 Aligned_cols=230 Identities=17% Similarity=0.173 Sum_probs=185.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
..++.|+|+.++.. .+ +++.+.+++.+.... ..+| |..|.++||+++|++++ +++++|++ |+|+
T Consensus 14 ~~~~~i~l~~n~~~--~~---~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~~------~~~~~i~~--t~G~ 77 (337)
T 3p1t_A 14 AAAQAVCLAFNENP--EA---VEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHFS------CPEDNLML--VRGI 77 (337)
T ss_dssp CCCCCEECSSCCCC--SC---CCHHHHHHHHHHGGG--TTSC-CTTHHHHHHHHHHHHHT------SCGGGEEE--ESHH
T ss_pred CCCCceEeeCCCCC--CC---CCHHHHHHHHHhhhh--hccC-CCCchHHHHHHHHHHhC------cCHHHEEE--eCCH
Confidence 34568999988752 22 567888888887654 5668 56799999999999984 56789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
++++.++ +..+ +||+|++++|+|..+...++..|++++.+|+ ++ ++++|++.+++. .+++++++++||
T Consensus 78 ~~~l~~~---~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~-----~~~~~v~i~~p~ 145 (337)
T 3p1t_A 78 DECFDRI---SAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL-TD-DLLLDPNDLAQV-----SRDDCVVLANPS 145 (337)
T ss_dssp HHHHHHH---HHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECB-CT-TSSBCHHHHTTC-----CTTEEEEEESSC
T ss_pred HHHHHHH---HHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecC-CC-CCCCCHHHHHhh-----cCCCEEEEeCCC
Confidence 9999985 3344 5999999999999999999999999999998 44 478898887652 467899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++.+++.+|+ +++++ +|+||+|.+|.+.+. .. ....+++++++||||++|++|+|+||+++
T Consensus 146 nptG~~~~~~~l~~l~---~~~~~-~ivDea~~~~~~~~~--~~------~~~~~~~i~~~S~sK~~g~~G~r~G~~~~- 212 (337)
T 3p1t_A 146 NPTGQALSAGELDQLR---QRAGK-LLIDETYVDYSSFRA--RG------LAYGENELVFRSFSKSYGLAGLRLGALFG- 212 (337)
T ss_dssp TTTCCCCCHHHHHHHH---HHCSE-EEEECTTGGGSSCSS--SC------CCCBTTEEEEEESSSTTCCTTTCCEEEEC-
T ss_pred CCCCCCCCHHHHHHHH---HhCCc-EEEECCChhhccccc--cc------cccCCCEEEEeeCchhccCcchheEEEEe-
Confidence 9999999999887765 56676 555999999876541 11 12357899999999999999999999998
Q ss_pred cCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 401 TPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 401 ~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++.+.+.. ...+++.+.|.++..++++
T Consensus 213 -~-----~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~ 243 (337)
T 3p1t_A 213 -P-----SELIAAMKRKQ--WFCNVGTLDLHALEAALDN 243 (337)
T ss_dssp -C-----HHHHHHHHTTS--CTTCSCHHHHHHHHHHHTC
T ss_pred -C-----HHHHHHHHhhc--CCCCCCHHHHHHHHHHhCC
Confidence 7 57888887653 3467888999988888876
No 80
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.97 E-value=1.7e-29 Score=263.53 Aligned_cols=273 Identities=15% Similarity=0.183 Sum_probs=204.7
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.++.|+|+.++++. + +++.+.+++.+..... ....|++ .+..+||+++|++++ +++++|++ |+|
T Consensus 25 ~~~~i~l~~~~~~~--~---~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~g------~~~~~i~~--t~g 90 (360)
T 3hdo_A 25 IASWIKLNTNENPY--P---PSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELYG------FDPSWIIM--ANG 90 (360)
T ss_dssp CTTSEECSSCCCSS--C---CCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHHT------CCGGGEEE--ESS
T ss_pred ccceeeccCCCCCC--C---CCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHhC------cCcceEEE--cCC
Confidence 45689999998742 2 5688888888877542 1356754 467999999999994 57889999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSS 319 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p 319 (583)
+++++.++ +..+..+||+|++++|+|..+...++..|++++.+|+ +++ +.+ +.+++ . .+++++++++|
T Consensus 91 ~~~al~~~---~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~-~~~--~~l~~----~-~~~~~v~i~~p 158 (360)
T 3hdo_A 91 SDEVLNNL---IRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGL-TGD-FRI--AGFPE----R-YEGKVFFLTTP 158 (360)
T ss_dssp HHHHHHHH---HHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECB-CTT-SSB--TTCCS----S-BCSSEEEEESS
T ss_pred HHHHHHHH---HHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeC-CCC-CCH--HHHHh----h-cCCCEEEEeCC
Confidence 99999985 4456777999999999999999999999999999998 442 333 33322 1 23458899999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||.+++.+++.+| |++++++||+||+|.+|...+ ..++ .+..+++++++||||.+|++|+|+||+++
T Consensus 159 ~nptG~~~~~~~l~~l---~~~~~~~li~De~~~~~~~~~----~~~~---~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 228 (360)
T 3hdo_A 159 NAPLGPSFPLEYIDEL---ARRCAGMLVLDETYAEFAESN----ALEL---VRRHENVVVTRTLSKSYSLAGMRIGLAIA 228 (360)
T ss_dssp CTTTCCCCCHHHHHHH---HHHBSSEEEEECTTGGGSSCC----CTHH---HHHCSSEEEEEESTTTTSCTTSCCEEEEC
T ss_pred CCCCCCCcCHHHHHHH---HHHCCCEEEEECChHhhCCcc----hhHH---hccCCCEEEEecchHhhcCCccceeeEee
Confidence 9999999999876555 567899999999999974321 2222 24568999999999999999999999998
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChh-hhhhhhhHHHHHHHHHHHHhh-ccCCCccchhhHHHH
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPK-LKAQCDETERIMSQLKILIRG-FYSNPPIHGARIVTE 477 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~l~~~~r~-~~~~~p~~g~~i~~~ 477 (583)
+ +++++.+..... .++.+.+.|.++..++++.. +++..+..++..+.+.+.++. .+...|..|.|+|+.
T Consensus 229 --~-----~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 299 (360)
T 3hdo_A 229 --R-----PEVIAALDKIRD--HYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIGYDVIPSQGNYLFAT 299 (360)
T ss_dssp --C-----HHHHHHHHHHSC--SCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSEEEEE
T ss_pred --C-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCCCccEEEEE
Confidence 6 588998887654 36789999999999998643 333333333333333333332 344557778888875
Q ss_pred hc
Q psy14428 478 IL 479 (583)
Q Consensus 478 ~l 479 (583)
+.
T Consensus 300 ~~ 301 (360)
T 3hdo_A 300 PP 301 (360)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.97 E-value=6.5e-32 Score=288.75 Aligned_cols=290 Identities=12% Similarity=0.020 Sum_probs=215.3
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhc-cC-CCCCCCCCC-C---CHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYE-KN-LDHEYANIG-G---DAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~-~~-~~~~Y~~~~-G---~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
...|+|+.|+++.. +++.+.+++.+.+. .+ ....|++.. | .++||++||+|+++.+++.+++++|++
T Consensus 56 ~~~i~l~~g~~~~~-----~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~-- 128 (427)
T 2hox_A 56 GCSADVASGDGLFL-----EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVF-- 128 (427)
T ss_dssp TCCEECCSCCCGGG-----HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEE--
T ss_pred CceEEecCcCCCCC-----CCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEE--
Confidence 46789999998521 34566777766653 22 123599988 9 999999999999887777789999999
Q ss_pred cCCchhHHHHHHHHHHHh--------CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 237 GISGSGSLRVGTAFLERF--------YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~--------~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
|+|+++++.++ +..+ .++||.|++++|+|+.|...++..|++++.+.+ |++.+++.+ .
T Consensus 129 t~G~~~al~~~---~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~--------d~~~l~~~~---~ 194 (427)
T 2hox_A 129 GVGVTQLIHGL---VISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAG--------NAANYVNVS---N 194 (427)
T ss_dssp ESHHHHHHHHH---HHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEEE--------EGGGGTTCS---C
T ss_pred eCCHHHHHHHH---HHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeecC--------CHHHHHHhh---c
Confidence 99999999995 4455 677999999999999999999999998875544 555665544 4
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 309 ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
+++++++++|||||||.+++ +.+ + ++.+|.|++|.+ + ..++..+ . .+++|+++||||++|
T Consensus 195 ~~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~----~----~~s~~~~-~-~~~~i~~~S~SK~~g 254 (427)
T 2hox_A 195 PEQYIEMVTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW----P----HYTPIKY-K-ADEDILLFTMSKFTG 254 (427)
T ss_dssp GGGEEEEEESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS----T----TTSCCCS-C-BCCSEEEEEHHHHTS
T ss_pred CCceEEEEcCCCCCcccccH-HHH-------c--CCCEEEeecccC----C----CCCcccc-C-CCceEEEEeChhcCC
Confidence 56789999999999999999 422 2 456777777643 1 1122222 1 578999999999999
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCc
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPP 468 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p 468 (583)
++|+|+||+++ ++ +++++++.+.......+++.+.|.++..+|++.. .. +. .
T Consensus 255 ~~G~RiG~~~~--~~----~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~--~~----------l~-~--------- 306 (427)
T 2hox_A 255 HSGSRFGWALI--KD----ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVV--AM----------VK-T--------- 306 (427)
T ss_dssp CGGGCCEEEEE--CC----HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH--HH----------HH-H---------
T ss_pred CCCceEEEEEE--CC----HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcch--hh----------hc-c---------
Confidence 99999999999 75 4799999998877778999999999988886421 00 00 0
Q ss_pred cchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-------CCC---cccccccccceeecCCCh
Q psy14428 469 IHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDK-GS-------KKN---WDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 469 ~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~-------pg~---~~~~~~~~g~f~~~~l~~ 536 (583)
.. +.|.++++++++++.++|+.+.+.|++. +. |.. +.+..+++|+|.|..++.
T Consensus 307 --------~~-------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~ 370 (427)
T 2hox_A 307 --------QK-------GTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW 370 (427)
T ss_dssp --------HT-------TSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS
T ss_pred --------cc-------chhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC
Confidence 00 0122346777888889999999999875 21 211 344568889999988764
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=2.7e-27 Score=250.08 Aligned_cols=285 Identities=12% Similarity=0.032 Sum_probs=209.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
++..+||+.|.+. +.+ +++.+.+++.+.+... ....|.+..|.+++++++++++.+.+|. ++|++ |+|
T Consensus 42 g~~~idl~~~~~~---~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~--~~g 111 (398)
T 3a2b_A 42 GRRVLMFGSNSYL---GLT-TDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAIL--FST 111 (398)
T ss_dssp TEEEEECSCSCTT---CGG-GCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEE--ESS
T ss_pred CceEEEeeccccc---CCC-CCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEE--ECC
Confidence 3467899998761 111 4577888877766541 1234667889889999999888776553 58999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCC-CcEEEEeCC
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE-RSILFLQTS 318 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~-~~~~i~i~~ 318 (583)
+++|+.++ +..+..+||.|++++|+|..+...++..|++++.+|+ +|++.+++.+....+ +++++++++
T Consensus 112 gt~a~~~~---~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 112 GFQSNLGP---LSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp HHHHHHHH---HHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred HHHHHHHH---HHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeC
Confidence 99999985 4556777999999999999999999999999998876 278899888865332 688999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCc-EEEEecCcccccccCccceEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQ-LCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~~l~GlRiG~l 397 (583)
||||||.+++ +++|+++|++++++||+||+|.++.++. ...++....+..++ +++++||||.++++| ||+
T Consensus 182 ~~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~ 252 (398)
T 3a2b_A 182 IFSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGH---KGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFV 252 (398)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG---GGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEE
T ss_pred CCCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCC---CCCchHhhcCCCcCCeEEEecccccccCCC---cEE
Confidence 9999999997 6788999999999999999999988753 11223222222345 699999999999888 999
Q ss_pred EEEcCCchhHHHHHHHHHHH-HhccccCCChHHHHH-HHHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHH
Q psy14428 398 SVLTPTSDETERIMSQLKIL-IRGFYSNPPIHGARI-VTEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIV 475 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~-~~~~~~~~s~~~q~~-~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~ 475 (583)
++ + +++++.+... ......+.+.+.|.+ +...+++
T Consensus 253 ~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~------------------------------------ 289 (398)
T 3a2b_A 253 AG--D-----ADVIDFLKHNARSVMFSASMTPASVASTLKALEI------------------------------------ 289 (398)
T ss_dssp EE--C-----HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH------------------------------------
T ss_pred Ee--C-----HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHH------------------------------------
Confidence 99 6 5788888774 334445556666654 3344421
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccceeecCCCh
Q psy14428 476 TEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITNQKGMFCYTGLSA 536 (583)
Q Consensus 476 ~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~~~g~f~~~~l~~ 536 (583)
+ ++++++++++.++++.+.+.|++.+ +....++ |.|.|..++.
T Consensus 290 ------------~-~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~-g~~~~~~~~~ 332 (398)
T 3a2b_A 290 ------------I-QNEPEHIEKLWKNTDYAKAQLLDHG----FDLGATE-SPILPIFIRS 332 (398)
T ss_dssp ------------H-HHCTHHHHHHHHHHHHHHHHHHHTT----CCBCSCC-SSEEEEECCC
T ss_pred ------------H-hhCHHHHHHHHHHHHHHHHHHHhcC----CCcCCCC-CCEEEEEcCC
Confidence 0 1234456667788888888888763 3344444 6788877753
No 83
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.94 E-value=5.3e-25 Score=233.52 Aligned_cols=229 Identities=12% Similarity=0.051 Sum_probs=179.9
Q ss_pred ccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCH---HHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDA---KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 165 ~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~---~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
...++.++|+.. .+++..+.+.++..........+.|++ .|.+ +||++++++++. +++++ ++|++
T Consensus 20 ~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g~--------~~~i~--~~~g~ 87 (404)
T 1e5e_A 20 DQFGAAIPPIYQ-TSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEKT--------EACVA--TSSGM 87 (404)
T ss_dssp CTTCCSSCCCCC-CSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHH
T ss_pred CCCCCcCCCCcC-CCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhCC--------CcEEE--eCChH
Confidence 356888888754 334455666666543222223567877 6777 999999999853 36677 77888
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH----HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeC
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR----FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQT 317 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~ 317 (583)
+|+.++ +..+..+||+|++++|+|..+.. .++..|++++.+|+ + |++.+++.+ .+++++++++
T Consensus 88 ~ai~~~---~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-~------d~~~l~~~i---~~~t~~v~l~ 154 (404)
T 1e5e_A 88 GAIAAT---VLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINT-A------IPGEVKKHM---KPNTKIVYFE 154 (404)
T ss_dssp HHHHHH---HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-T------STTHHHHHC---CTTEEEEEEE
T ss_pred HHHHHH---HHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-C------CHHHHHHhc---CCCCcEEEEE
Confidence 999885 44456779999999999999988 78889999999987 2 677888777 5678999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHh-cCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc-e
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQ-RHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-G 395 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~-~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G 395 (583)
+||||||.+++ +++|+++|++ +|++||+||+|.++.+.. ++ ..++++++.|+||.|+++|+|+ |
T Consensus 155 ~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~------~~-----~~~~di~~~S~sK~~~~~g~ri~G 220 (404)
T 1e5e_A 155 TPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN------PV-----DFGVDVVVHSATKYINGHTDVVAG 220 (404)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC------GG-----GGTCSEEEEETTTTTTCSSCCCCE
T ss_pred CCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC------cc-----ccCCEEEEEcCccccCCCCCCeEE
Confidence 99999999996 7888999999 999999999999987642 11 1367899999999999999998 9
Q ss_pred EEEEEcCCchhHHHHHH-HHHHHHhcc-ccCCChHHHHHHHHHhCC
Q psy14428 396 TFSVLTPTSDETERIMS-QLKILIRGF-YSNPPIHGARIVTEILSD 439 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~-~l~~~~~~~-~~~~s~~~q~~~~~~l~~ 439 (583)
|+++ + +++++ ++....... ..+.+.+.|.++...+++
T Consensus 221 ~~~~--~-----~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~ 259 (404)
T 1e5e_A 221 LICG--K-----ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST 259 (404)
T ss_dssp EEEE--C-----HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT
T ss_pred EEEE--C-----HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH
Confidence 9999 7 46777 777765554 567888999988888865
No 84
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.93 E-value=3.6e-24 Score=225.65 Aligned_cols=280 Identities=10% Similarity=0.027 Sum_probs=189.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-C-----CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-N-----LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~-----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
+...+||+.+.+. +. .+++.+.+++.+.+.. . ....|....+..+||++++++++. +++|++
T Consensus 42 g~~~id~~~~~~~---g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~- 109 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GL-ADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGT-------DDTILY- 109 (399)
T ss_dssp TEEEEECSSCCTT---SC-TTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTC-------SEEEEE-
T ss_pred CeeEEEeeccCcc---cc-cCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCC-------CcEEEE-
Confidence 3467899888542 21 2457777777766644 1 111233455579999999999852 246666
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCC---CcE
Q psy14428 236 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE---RSI 312 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~---~~~ 312 (583)
++| ++++.++ +..+..+||.|++++|+|+.+...++..|++++.+|.. |++.+++.++.... +++
T Consensus 110 -~sG-t~a~~~~---l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~~~~~ 177 (399)
T 3tqx_A 110 -SSC-FDANGGL---FETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNN-------AMGDLEAKLKEADEKGARFK 177 (399)
T ss_dssp -SCH-HHHHHTT---HHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECTT-------CTTHHHHHHHHHHTTTCSSE
T ss_pred -Cch-HHHHHHH---HHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCCC-------CHHHHHHHHHhhhccCCCce
Confidence 766 6688764 45567789999999999999999999999999988862 56677777754322 789
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH-hcCcEEEEecCcccccccC
Q psy14428 313 LFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK-EVGQLCLAQSFSKNMGLYG 391 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~l~G 391 (583)
++++++||||||.+++ +++|+++|+++|++||+||+|....++. ...++....+ ..+..++++||||.++ |
T Consensus 178 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~di~~~s~sK~~~--g 249 (399)
T 3tqx_A 178 LIATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGE---NGRGTPEYCGVADRVDILTGTLGKALG--G 249 (399)
T ss_dssp EEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST---TSCCHHHHHTCTTCCSEEEEESSSSSC--S
T ss_pred EEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC---CCCchHHhhCCCCCCcEEEecchHhcc--c
Confidence 9999999999999999 7788999999999999999996433332 1112222222 2356799999999998 4
Q ss_pred ccceEEEEEcCCchhHHHHHHHHHHHHhcc--ccCCChHHHHHHHHHhCCh--hhhhhhhhHHHHHHHHHHHHhh-ccCC
Q psy14428 392 ERVGTFSVLTPTSDETERIMSQLKILIRGF--YSNPPIHGARIVTEILSDP--KLKAQCDETERIMSQLKILIRG-FYSN 466 (583)
Q Consensus 392 lRiG~lv~~~p~~~~~~~li~~l~~~~~~~--~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~l~~~~r~-~~~~ 466 (583)
++.||+++ + +++++.+....... ..+.+.+.+.++...++.. ..++..++.++..+.+.+.++. .+..
T Consensus 250 ~~gG~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 322 (399)
T 3tqx_A 250 ASGGYTSG--H-----KEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLGFQL 322 (399)
T ss_dssp SCCEEEEE--C-----HHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred CceEEEEc--C-----HHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 56699999 7 57888888753322 3356666666766666532 2233333333322222222222 4555
Q ss_pred CccchhhHHHHhcC
Q psy14428 467 PPIHGARIVTEILS 480 (583)
Q Consensus 467 ~p~~g~~i~~~~l~ 480 (583)
.+..|.++|+.+..
T Consensus 323 ~~~~~~~~~~~~~~ 336 (399)
T 3tqx_A 323 VPGNHPIIPVMLGD 336 (399)
T ss_dssp CCCSSSEEEEEEEC
T ss_pred CCCCCCEEEEEeCC
Confidence 57778887776543
No 85
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.92 E-value=1.7e-23 Score=219.78 Aligned_cols=277 Identities=11% Similarity=0.052 Sum_probs=191.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CC-----CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NL-----DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
+...+||+.+.+. + ..+++.+.+++.+.+.. .. ...|....+..+||++++++++ . ++.|++
T Consensus 38 g~~~id~~~~~~~---~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~~i~~- 105 (384)
T 1bs0_A 38 DRQYLNFSSNDYL---G-LSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG----Y---SRALLF- 105 (384)
T ss_dssp TEEEEECSCCCTT---S-GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----C---SEEEEE-
T ss_pred CceEEEeeccCcc---C-CCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC----C---CcEEEe-
Confidence 3457888887641 1 12457788887776654 21 1223456788999999999994 2 256666
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEE
Q psy14428 236 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFL 315 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~ 315 (583)
++| ++++.++ +..+.++||.|++++|+|..+...++..|++++.+|. .|++.+++.+++..+++++++
T Consensus 106 -~sG-t~a~~~~---~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~ 173 (384)
T 1bs0_A 106 -ISG-FAANQAV---IAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVV 173 (384)
T ss_dssp -SCH-HHHHHHH---HHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEE
T ss_pred -CCc-HHHHHHH---HHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEE
Confidence 776 7888875 4456777999999999999999999999999988875 278889888875444578999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccce
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG 395 (583)
+++||||||.+++ +++|+++|++++++||+||+|.++.++.. .. ++....+. +..++++||||.++++| |
T Consensus 174 ~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~--~~-~~~~~~~~-~~di~~~s~sK~~~~~G---G 243 (384)
T 1bs0_A 174 TEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQ--GR-GSCWLQKV-KPELLVVTFGKGFGVSG---A 243 (384)
T ss_dssp EESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGG--GC-CHHHHTTC-CCSEEEEESSSTTSSCC---E
T ss_pred EeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCC--CC-chHHhcCC-CCcEEEeeccchhhccC---c
Confidence 9999999999998 67789999999999999999988765410 01 11121122 23499999999999777 9
Q ss_pred EEEEEcCCchhHHHHHHHHHHHHhcc--ccCCChHHHHHHHHHhCCh---hhhhhhhhHHHHHHHHHHHHhh-ccCCCcc
Q psy14428 396 TFSVLTPTSDETERIMSQLKILIRGF--YSNPPIHGARIVTEILSDP---KLKAQCDETERIMSQLKILIRG-FYSNPPI 469 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~~l~~~~~~~--~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~l~~~~r~-~~~~~p~ 469 (583)
|+++ + +++++++....... ..+.+.+.|.++...++.- +.++..++.++..+.+.+.++. .+...|.
T Consensus 244 ~~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 316 (384)
T 1bs0_A 244 AVLC--S-----STVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADS 316 (384)
T ss_dssp EEEE--C-----HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECSC
T ss_pred EEEe--C-----HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999 6 57888887653222 2357888888777666421 2233333333333333333332 2334456
Q ss_pred chhhHHHHhc
Q psy14428 470 HGARIVTEIL 479 (583)
Q Consensus 470 ~g~~i~~~~l 479 (583)
.+.++|+.+.
T Consensus 317 ~~~~~~~~~~ 326 (384)
T 1bs0_A 317 CSAIQPLIVG 326 (384)
T ss_dssp CSSBCCEEEE
T ss_pred CCCEEEEEeC
Confidence 6777776553
No 86
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.92 E-value=1e-24 Score=232.40 Aligned_cols=291 Identities=13% Similarity=0.067 Sum_probs=197.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC--CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL--DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+...+|++.+.+....|. +++.+.+++.+.+.... ...|.+..+..+||++|++++. + . .+++|++ |+|
T Consensus 40 g~~~id~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~--~~g 110 (426)
T 1sff_A 40 GREYLDFAGGIAVLNTGH--LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLL--VTT 110 (426)
T ss_dssp CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEE--ESS
T ss_pred CCEEEEcccChhhcccCC--CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEE--eCc
Confidence 345678888876444443 45788888887775421 2357788899999999999984 2 2 3589999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH-HHHhhcCCe-------------EEEEecccC----CCCCCChhhHH
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV-RFCTDSRLN-------------VGAYRYFDN----KTNGLDFAGMM 301 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~-------------~~~v~~~d~----~~~g~d~~~l~ 301 (583)
+++|+.++..+.+.+.++| .|++++|+|..+. ..+...|.+ ++.+|+ +. .++.+|++.++
T Consensus 111 ~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~-~~~~~~~~~~~d~~~l~ 188 (426)
T 1sff_A 111 GSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALY-PCPLHGISEDDAIASIH 188 (426)
T ss_dssp HHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECC-CBGGGTBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCC-CccccccchHHHHHHHH
Confidence 9999998754333455555 8999999997754 455555543 666776 32 11236888998
Q ss_pred HHHHcC--CCCcEEEEe-CCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE
Q psy14428 302 EDIKAM--PERSILFLQ-TSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL 377 (583)
Q Consensus 302 ~~l~~~--~~~~~~i~i-~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v 377 (583)
+.+++. .++++++++ |+||| || .+++++++++|+++|+++|++||+||+|.+|.+.+. ..++ +..+.+
T Consensus 189 ~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~----~~~~~~ 260 (426)
T 1sff_A 189 RIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT---LFAM----EQMGVA 260 (426)
T ss_dssp HHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGG----GGTTSC
T ss_pred HHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc---hhhh----hhcCCC
Confidence 888531 134555555 78889 99 899999999999999999999999999999876541 1111 122333
Q ss_pred EEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhHHHHHH
Q psy14428 378 CLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDETERIMS 454 (583)
Q Consensus 378 i~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~ 454 (583)
+.+.||||.++. |+|+||+++ + +++++.+.........+.+.++|.++...++ ++.+.++..+.+..+.
T Consensus 261 ~di~s~sK~~~~-GlriG~~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~ 332 (426)
T 1sff_A 261 PDLTTFAKSIAG-GFPLAGVTG--R-----AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLK 332 (426)
T ss_dssp CSEEEECGGGGT-SSCCEEEEE--E-----HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCEEEEcccccC-CCceEEEEE--c-----HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 445699999995 999999999 6 5777777643344556789999998885554 3344444444443332
Q ss_pred -HHHHHHhhc--cCCCccchhhHHHHhc
Q psy14428 455 -QLKILIRGF--YSNPPIHGARIVTEIL 479 (583)
Q Consensus 455 -~l~~~~r~~--~~~~p~~g~~i~~~~l 479 (583)
.+..+.... +...+..|.++|+.+.
T Consensus 333 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 360 (426)
T 1sff_A 333 DGLLAIAEKHPEIGDVRGLGAMIAIELF 360 (426)
T ss_dssp HHHHHHHHTCTTEEEEEEETTEEEEEEB
T ss_pred HHHHHHHHhCCCeEEEEEEEEEEEEEEe
Confidence 333321111 1122334888887763
No 87
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.92 E-value=8.7e-24 Score=224.14 Aligned_cols=211 Identities=11% Similarity=0.062 Sum_probs=166.3
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccC------CCCCCCC--CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN------LDHEYAN--IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~------~~~~Y~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
+.++|+.|.+. + +++.+.+++.+..... ....|++ ..+..+||++++++++.. ++++|++
T Consensus 28 ~~i~l~~~~~~-----~-~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~- 95 (420)
T 1t3i_A 28 PLVYLDNAATS-----Q-KPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINAR-----SPREIVY- 95 (420)
T ss_dssp ECEECBTTTCC-----C-CCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE-
T ss_pred ceEEecCCccC-----C-CCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE-
Confidence 47889888874 1 4577888877766541 1234554 578899999999998642 5689999
Q ss_pred ecCCchhHHHHHHHHHHHh----CCCCCEEEEcCCCChh----hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 236 QGISGSGSLRVGTAFLERF----YPGVKTVYFPTPTWNG----HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~----~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
|+|+++|+.++ +..+ ..+||+|++++|+|.. +...++..|++++.+|+ + +++.+|++.+++.+
T Consensus 96 -~~g~t~a~~~~---~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~l--- 166 (420)
T 1t3i_A 96 -TRNATEAINLV---AYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL-D-EQESFDLEHFKTLL--- 166 (420)
T ss_dssp -ESSHHHHHHHH---HHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB-C-TTSSBCHHHHHHHC---
T ss_pred -cCChHHHHHHH---HHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc-C-CCCCcCHHHHHHhh---
Confidence 99999999986 3444 6679999999999998 56677788999999998 4 34668999998887
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc
Q psy14428 308 PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 387 (583)
.++++++++++|+||||.+++ +++|.++|+++|++||+||+|......- .+.. .+..+++.|+||.+
T Consensus 167 ~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~------~~~~----~~~di~~~s~sK~~ 233 (420)
T 1t3i_A 167 SEKTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYPL------DVQL----IDCDWLVASGHKMC 233 (420)
T ss_dssp CTTEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSCC------CHHH----HTCSEEEEEGGGTT
T ss_pred CCCceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCccC------chhh----cCCCEEEEehhhhc
Confidence 567899999999999999999 6788999999999999999998654321 1222 24678999999999
Q ss_pred cccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 388 GLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 388 ~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
|.+| +||+++ + +++++++...
T Consensus 234 ~~~g--~G~~~~--~-----~~~~~~~~~~ 254 (420)
T 1t3i_A 234 APTG--IGFLYG--K-----EEILEAMPPF 254 (420)
T ss_dssp SCTT--CEEEEE--C-----HHHHHHSCCC
T ss_pred CCCc--eEEEEE--c-----hHHHhhcCce
Confidence 9778 999999 6 5777776543
No 88
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.91 E-value=2.5e-23 Score=218.11 Aligned_cols=198 Identities=14% Similarity=0.046 Sum_probs=153.9
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
+++.+.+++.+.. ..+|++. ..++++++++++.+..|.+ ++++|++ |+|+++|+.++ +..+..+||+|
T Consensus 31 ~~~~v~~a~~~~~----~~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~--~~g~t~a~~~~---~~~l~~~gd~v 98 (386)
T 2dr1_A 31 CFPEVLEIMKVQM----FSHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLV--PSSGTGIMEAS---IRNGVSKGGKV 98 (386)
T ss_dssp CCHHHHHHTTSCC----CCTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEE--SSCHHHHHHHH---HHHHSCTTCEE
T ss_pred CcHHHHHHHhccc----ccccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEE--eCChHHHHHHH---HHHhhcCCCeE
Confidence 4567776654433 2246432 3678888888887766665 5778999 99999999985 44456679999
Q ss_pred EEcCCCChh--hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 262 YFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 262 lv~~P~y~~--~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
++++|+|.. +...++..|++++.++. +. ++.+|++.+++.+++ .++++++++++|+||||.+.+ +++|+++|
T Consensus 99 l~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~-~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 172 (386)
T 2dr1_A 99 LVTIIGAFGKRYKEVVESNGRKAVVLEY-EP-GKAVKPEDLDDALRK-NPDVEAVTITYNETSTGVLNP---LPELAKVA 172 (386)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCHHHHHHHHHH-CTTCCEEEEESEETTTTEECC---HHHHHHHH
T ss_pred EEEcCCchhHHHHHHHHHhCCceEEEec-CC-CCCCCHHHHHHHHhc-CCCCcEEEEEeecCCcchhCC---HHHHHHHH
Confidence 999999998 88889999999999998 54 466899999998864 246788888999999999987 67889999
Q ss_pred HhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 340 ~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
+++|++||+||+|..+.+.- ++ +..+.++++.|+||.++.++ ++||+++ + +++++++.
T Consensus 173 ~~~~~~li~D~a~~~~~~~~------~~----~~~~~di~~~s~sK~~~~~~-g~G~~~~--~-----~~~~~~~~ 230 (386)
T 2dr1_A 173 KEHDKLVFVDAVSAMGGADI------KF----DKWGLDVVFSSSQKAFGVPP-GLAIGAF--S-----ERFLEIAE 230 (386)
T ss_dssp HHTTCEEEEECTTTBTTBCC------CT----TTTTCSEEEEETTSTTCCCS-SCEEEEE--C-----HHHHHHHT
T ss_pred HHcCCeEEEEccccccCccc------cc----cccCCcEEEEeccccccCCC-ceEEEEE--C-----HHHHHHHh
Confidence 99999999999998776431 11 22356899999999998663 4999999 6 46777663
No 89
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.91 E-value=2.6e-24 Score=225.13 Aligned_cols=281 Identities=12% Similarity=0.139 Sum_probs=189.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|++.+.+....+. +++.+.+++.+.+... ....| +..+..+|++++++++ |. +++|++ |+
T Consensus 26 ~g~~~ld~~~~~~~~~~g~--~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~---~~~v~~--~~ 93 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGH--AYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT---EGKVFF--AN 93 (375)
T ss_dssp TCCEEEESSHHHHTCTTCB--SCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS---CEEEEE--ES
T ss_pred CCCEEEEcCCcccccccCC--CCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC---CCeEEE--eC
Confidence 3456789999887544442 4578888887776531 12357 4567899999999986 33 489999 99
Q ss_pred CchhHHHHHHHHHHHhC---CCC-CEEEEcCCCChhhHHHHhhcCCe-------------EEEEecccCCCCCCChhhHH
Q psy14428 239 SGSGSLRVGTAFLERFY---PGV-KTVYFPTPTWNGHVRFCTDSRLN-------------VGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~---~~g-d~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~d~~~~g~d~~~l~ 301 (583)
|+++|+.++...+..+. ++| |+|++++|+|..+...+...+.. +..++. .|++.++
T Consensus 94 g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 166 (375)
T 2eh6_A 94 SGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVY 166 (375)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHH
T ss_pred chHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHH
Confidence 99999998754333344 557 99999999999887655544322 222222 3777777
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 302 EDIKAMPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 302 ~~l~~~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
+.+ .++++++++++||||||.+ .+.+++++|+++|+++|++||+||+|.+|...+. ..++..+ +...+++
T Consensus 167 ~~l---~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~-~~~~d~~-- 237 (375)
T 2eh6_A 167 KLL---DEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE---FYAYQHF-NLKPDVI-- 237 (375)
T ss_dssp TTC---CTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGGGG-TCCCSEE--
T ss_pred HHh---cCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc---chhhhhc-CCCCCEE--
Confidence 665 4578899999999999999 5799999999999999999999999998765431 1122221 1123444
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHH
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILI 460 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 460 (583)
||||.++ +|+|+||+++ + +++++++.........+.+.+.|.++...++... +..++.++..+.+.+.+
T Consensus 238 -s~SK~~~-~g~~~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L 306 (375)
T 2eh6_A 238 -ALAKGLG-GGVPIGAILA--R-----EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKL 306 (375)
T ss_dssp -EECGGGG-TTSCCEEEEE--E-----HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred -EEccccc-CCCCeEEEEE--c-----HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 8999999 7999999999 6 4677776653333455678899988887776432 22222222222232223
Q ss_pred hhc-cCCCccchhhHHHHhcC
Q psy14428 461 RGF-YSNPPIHGARIVTEILS 480 (583)
Q Consensus 461 r~~-~~~~p~~g~~i~~~~l~ 480 (583)
+.. ....+..|.++|+.+..
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~ 327 (375)
T 2eh6_A 307 KELGKGKVKGRGLMLGLELER 327 (375)
T ss_dssp HHTTSSEEEEETTEEEEECSS
T ss_pred HHHhcCCceEEEEEEEEEEcC
Confidence 221 23345667777776543
No 90
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.91 E-value=1.9e-23 Score=220.00 Aligned_cols=197 Identities=12% Similarity=0.078 Sum_probs=153.5
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCchhHHHHHHHHHHHhCCCCCE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISGSGSLRVGTAFLERFYPGVKT 260 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~~~al~l~~~~l~~~~~~gd~ 260 (583)
+++.+.+++.+... ..|++. ..++++++++++.+..|. +++ +|++ |+|+++|+.++ +..+..+||+
T Consensus 45 ~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~--t~g~t~al~~~---~~~~~~~gd~ 111 (393)
T 1vjo_A 45 AHPSVLQAMNVSPV----GHLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAV--SGTGTAAMEAT---IANAVEPGDV 111 (393)
T ss_dssp CCHHHHHHHSSCCC----CTTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEE--SSCHHHHHHHH---HHHHCCTTCE
T ss_pred CCHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEE--eCchHHHHHHH---HHhccCCCCE
Confidence 45777777655432 246442 567788888877766554 567 8999 99999999985 4445677999
Q ss_pred EEEcCCCChh--hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 261 VYFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 261 Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
|++++|+|.. +...++..|++++.+|+ ++ ++.+|++.+++.+... +++++++++||||||.+++ +++|+++
T Consensus 112 Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---l~~i~~l 184 (393)
T 1vjo_A 112 VLIGVAGYFGNRLVDMAGRYGADVRTISK-PW-GEVFSLEELRTALETH--RPAILALVHAETSTGARQP---LEGVGEL 184 (393)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CTTHHHH
T ss_pred EEEEcCChhHHHHHHHHHHcCCceEEEec-CC-CCCCCHHHHHHHHhhC--CceEEEEeccCCCcceecc---HHHHHHH
Confidence 9999999999 99999999999999998 54 3568999999988531 5678899999999999987 6788999
Q ss_pred HHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 339 VKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 339 a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
|+++|++||+||+|. +. .. + ..+ +..+..+++.|+||.++.+| |+||+++ + +++++++..
T Consensus 185 ~~~~~~~li~Dea~~-~g--~~--~-~~~----~~~~~di~~~s~sK~l~~~~-~~G~l~~--~-----~~~~~~~~~ 244 (393)
T 1vjo_A 185 CREFGTLLLVDTVTS-LG--GV--P-IFL----DAWGVDLAYSCSQKGLGCSP-GASPFTM--S-----SRAIEKLQR 244 (393)
T ss_dssp HHHHTCEEEEECTTT-TT--TS--C-CCT----TTTTCSEEECCSSSTTCSCS-SCEEEEE--C-----HHHHHHHHT
T ss_pred HHHcCCEEEEECCcc-cc--Cc--C-Ccc----cccCccEEEEcCcccccCCC-ceEEEEE--C-----HHHHHHHhc
Confidence 999999999999998 32 11 1 111 22356789999999998788 9999999 7 577777754
No 91
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.91 E-value=7.1e-24 Score=223.84 Aligned_cols=238 Identities=12% Similarity=0.163 Sum_probs=166.5
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLD--HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+...+|++.+.+....|. +++.+.+++.+..+.... ..| +.....+|++.+++++ | +++|++ |+|
T Consensus 39 g~~~ld~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~--~~g 105 (397)
T 2ord_A 39 GNAYLDFTSGIAVNVLGH--SHPRLVEAIKDQAEKLIHCSNLF-WNRPQMELAELLSKNT----F----GGKVFF--ANT 105 (397)
T ss_dssp CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCSCCCTTS-EEHHHHHHHHHHHHTT----T----SCEEEE--ESS
T ss_pred CCEEEECCccccccccCC--CCHHHHHHHHHHHHhcccCcccc-CCHHHHHHHHHHHHhc----C----CCeEEE--eCC
Confidence 445689988866544443 457888888777654211 112 2223345555555543 3 479999 999
Q ss_pred chhHHHHHHHHHHHhC----CCCCEEEEcCCCChhh-HHHHhhcCCe------------EEEEecccCCCCCCChhhHHH
Q psy14428 240 GSGSLRVGTAFLERFY----PGVKTVYFPTPTWNGH-VRFCTDSRLN------------VGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~----~~gd~Vlv~~P~y~~~-~~~~~~~G~~------------~~~v~~~d~~~~g~d~~~l~~ 302 (583)
+++|+.++...+.... +.++.|++++|+|... ...++..|.+ ++.+|. + |++.+++
T Consensus 106 g~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-~------d~~~l~~ 178 (397)
T 2ord_A 106 GTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-N------NVEDLRR 178 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-T------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-C------CHHHHHH
Confidence 9999998644332211 3257899999999654 4467777776 666655 1 7888888
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEe
Q psy14428 303 DIKAMPERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQ 381 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~ 381 (583)
.+ .++++++++++||||||. +++.+++++|+++|+++|++||+||+|.++.+.+ ...++..+ +...+++
T Consensus 179 ~l---~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~~-~~~~d~~--- 248 (397)
T 2ord_A 179 KM---SEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG---KLFAYQKY-GVVPDVL--- 248 (397)
T ss_dssp HC---CTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSHHHHH-TCCCSEE---
T ss_pred Hh---hcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc---cchhhhhh-CCCCCee---
Confidence 77 467899999999999999 9999999999999999999999999999887654 12233333 2223333
Q ss_pred cCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 382 SFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 382 S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
||||.++ +|+|+||+++ ++ +++ .+........++.+.+.|.++...++
T Consensus 249 s~sK~~~-~G~r~G~~~~--~~-----~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 296 (397)
T 2ord_A 249 TTAKGLG-GGVPIGAVIV--NE-----RAN-VLEPGDHGTTFGGNPLACRAGVTVIK 296 (397)
T ss_dssp EECGGGG-TTSCCEEEEE--CS-----TTC-CCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred eeccccC-CCcCeEEEEE--ch-----Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 8899999 9999999999 64 454 44432333456778999988887764
No 92
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.91 E-value=2.9e-23 Score=218.96 Aligned_cols=211 Identities=13% Similarity=0.107 Sum_probs=163.0
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCC--CC------CCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL--DH------EYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~--~~------~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
+.+.|+.+.+. + +++.+.+++.+.+.... .. .|.+..+..+||++++++++.. ++++|++
T Consensus 23 ~~i~l~~~~~~-----~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~- 90 (406)
T 1kmj_A 23 PLAYLDSAASA-----Q-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SAEELVF- 90 (406)
T ss_dssp ECEECCTTTCC-----C-CCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGGEEE-
T ss_pred ceEEecCCccC-----C-CCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCC-----CCCeEEE-
Confidence 46778877763 1 45678888777665421 11 1335678899999999998632 5689999
Q ss_pred ecCCchhHHHHHHHHHHHh----CCCCCEEEEcCCCChh----hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 236 QGISGSGSLRVGTAFLERF----YPGVKTVYFPTPTWNG----HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~----~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
|+|+++|+.++ +..+ ..+||+|++++|+|.. +...++..|++++.+|+ ++ ++.+|++.+++.+
T Consensus 91 -~~g~t~a~~~~---~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~d~~~l~~~l--- 161 (406)
T 1kmj_A 91 -VRGTTEGINLV---ANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPL-NP-DGTLQLETLPTLF--- 161 (406)
T ss_dssp -ESSHHHHHHHH---HHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECB-CT-TSCBCGGGHHHHC---
T ss_pred -eCChhHHHHHH---HHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEec-CC-CCCcCHHHHHHHh---
Confidence 99999999986 3445 6679999999999764 44557778999999998 43 4678999999887
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc
Q psy14428 308 PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 387 (583)
.++++++++++|+||||.+++ +++|+++|+++|++||+||+|...... . .+.. .+..+++.|+||.+
T Consensus 162 ~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~-----~-~~~~----~~~d~~~~s~~K~~ 228 (406)
T 1kmj_A 162 DEKTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHP-----V-DVQA----LDCDFYVFSGHKLY 228 (406)
T ss_dssp CTTEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC-----C-CHHH----HTCSEEEEEGGGTT
T ss_pred ccCCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCC-----C-cccc----cCCCEEEEEchhcc
Confidence 567899999999999999999 778899999999999999999865421 1 1222 25678999999999
Q ss_pred cccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 388 GLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 388 ~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
|.+| +||+++ + +++++++...
T Consensus 229 g~~G--~G~~~~--~-----~~~~~~~~~~ 249 (406)
T 1kmj_A 229 GPTG--IGILYV--K-----EALLQEMPPW 249 (406)
T ss_dssp SCTT--CEEEEE--C-----HHHHHHCCCS
T ss_pred CCCC--cEEEEE--e-----HHHHhhcCCc
Confidence 9888 899999 6 5777776543
No 93
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=1.6e-23 Score=218.50 Aligned_cols=206 Identities=11% Similarity=-0.003 Sum_probs=155.2
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--------CCCCCCCCCCCHHHHHH-HHHHHhCCCCCCCCCCCe
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--------LDHEYANIGGDAKFCKL-AAQLAYGEDFPAFKDNRL 232 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--------~~~~Y~~~~G~~~Lr~a-ia~~~~~~~g~~~~~~~I 232 (583)
.++.+.|..|.... .+++.+.+++.+..... ....|.+..+..+||++ ++++++. + +|
T Consensus 6 ~~~~i~ld~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~------~--~v 72 (371)
T 2e7j_A 6 TKDFINIDPLQTGG-----KLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC------D--VA 72 (371)
T ss_dssp --CCEECCHHHHTC-----CCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS------S--EE
T ss_pred CCCcEEecccccCC-----CCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCC------C--EE
Confidence 45567777765431 15678888887766432 12346678899999999 9999853 2 89
Q ss_pred EEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEe--cccCCCCCCChhhHHHHHHcCC--
Q psy14428 233 AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR--YFDNKTNGLDFAGMMEDIKAMP-- 308 (583)
Q Consensus 233 ~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~--~~d~~~~g~d~~~l~~~l~~~~-- 308 (583)
++ |+|+++|+.++ +..+..+||+|++++|+|..+...++..|++++.+| . ++ ++++|++.+++.+.+..
T Consensus 73 ~~--~~g~t~a~~~~---~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~-~~~~d~~~l~~~l~~~~~~ 145 (371)
T 2e7j_A 73 RV--TNGAREAKFAV---MHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTD-YP-DYAITPENFAQTIEETKKR 145 (371)
T ss_dssp EE--ESSHHHHHHHH---HHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCC-TT-TCCCCHHHHHHHHHHHTTT
T ss_pred EE--eCChHHHHHHH---HHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeeccc-CC-CCCcCHHHHHHHHHhhccc
Confidence 99 99999999986 444566799999999999999999999999999999 6 43 47899999999885321
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc
Q psy14428 309 ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG 388 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 388 (583)
++++++++++||||||.+++. ++|+++|+++|++||+||+|..+...- ++..+ +..+++.||||.++
T Consensus 146 ~~~~~v~~~~~~nptG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~~------~~~~~----~~di~~~s~sK~~~ 212 (371)
T 2e7j_A 146 GEVVLALITYPDGNYGNLPDV---KKIAKVCSEYDVPLLVNGAYAIGRMPV------SLKEI----GADFIVGSGHKSMA 212 (371)
T ss_dssp SCEEEEEEESSCTTTCCCCCH---HHHHHHHHTTTCCEEEECTTTBTTBCC------CHHHH----TCSEEEEEHHHHSS
T ss_pred CCeEEEEEECCCCCCcccCCH---HHHHHHHHHcCCeEEEECccccCCCCC------Chhhc----CCCEEEecCCcCCC
Confidence 578899999999999999985 777889999999999999999876431 22222 34589999999998
Q ss_pred ccCccceEEEEEcCC
Q psy14428 389 LYGERVGTFSVLTPT 403 (583)
Q Consensus 389 l~GlRiG~lv~~~p~ 403 (583)
. +.|+||+++ ++
T Consensus 213 ~-~~~~G~~~~--~~ 224 (371)
T 2e7j_A 213 A-SGPIGVMGM--KE 224 (371)
T ss_dssp C-CSSCEEEEE--CT
T ss_pred C-CCCcEEEEE--ec
Confidence 4 459999999 63
No 94
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.91 E-value=6.7e-23 Score=216.45 Aligned_cols=278 Identities=10% Similarity=0.051 Sum_probs=189.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CCC---CCCC--CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NLD---HEYA--NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~~---~~Y~--~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
.+...+||+.+.+ .+. .+++.+.+++.+.+.. ... ..|. ...+..+||++++++++ . + ++|++
T Consensus 43 ~g~~~id~~~~~~---~g~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~--~-~~i~~ 111 (401)
T 1fc4_A 43 DGSHVINFCANNY---LGL-ANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG----M--E-DAILY 111 (401)
T ss_dssp TSCEEEECCCSCT---TSC-TTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT----C--S-EEEEE
T ss_pred CCccEEEeeccCc---ccc-cCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC----C--C-cEEEe
Confidence 3456789988854 231 1357788887776643 211 1232 25678999999999994 2 2 56766
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCC---Cc
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE---RS 311 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~---~~ 311 (583)
++| ++++..+ +..+..+||.|++++|+|..+...++..|++++.++. .|++.+++.+.+..+ ++
T Consensus 112 --~sG-s~a~~~~---~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~ 178 (401)
T 1fc4_A 112 --SSC-FDANGGL---FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARH 178 (401)
T ss_dssp --SCH-HHHHHTT---HHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSS
T ss_pred --CCh-HHHHHHH---HHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCc
Confidence 776 5587764 4456777999999999999888889999999988864 277888887754211 67
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCC-CCCC-CCCCCchHHHHHHHHhcCcEEEEecCcccc-c
Q psy14428 312 ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYL-GLTS-GDFDKDAFSLRYFAKEVGQLCLAQSFSKNM-G 388 (583)
Q Consensus 312 ~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~-~l~~-~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~ 388 (583)
+++++++||||||.+++ +++|+++|++++++||+||+|. ++.+ .+ ....+...+ ..+.+++++||||.+ +
T Consensus 179 ~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g--~~~~~~~~~--~~~~di~~~s~sK~~~~ 251 (401)
T 1fc4_A 179 VLIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENG--RGSHEYCDV--MGRVDIITGTLGKALGG 251 (401)
T ss_dssp EEEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTS--CCHHHHTTC--TTCCSEEEEESSSTTCS
T ss_pred eEEEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCC--CccHHHcCC--CcCCcEEEecchhhccC
Confidence 89999999999999999 7788999999999999999995 8864 33 122221111 124579999999999 6
Q ss_pred ccCccceEEEEEcCCchhHHHHHHHHHHHHhc--cccCCChHHHHHHHHHhCChh-hhhhhhhHHHHHHHHHHHHhh-cc
Q psy14428 389 LYGERVGTFSVLTPTSDETERIMSQLKILIRG--FYSNPPIHGARIVTEILSDPK-LKAQCDETERIMSQLKILIRG-FY 464 (583)
Q Consensus 389 l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~--~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~l~~~~r~-~~ 464 (583)
.+| ||+++ + +++++.+...... ...+.+.+.|.++...++.-. .++..++.++..+.+.+.++. .+
T Consensus 252 ~~g---G~~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 321 (401)
T 1fc4_A 252 ASG---GYTAA--R-----KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGF 321 (401)
T ss_dssp SSC---EEEEE--C-----HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCC---EEEEc--C-----HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 555 99999 6 5788888875422 245788899998887775321 122222222222222222222 34
Q ss_pred CCCccchhhHHHHhc
Q psy14428 465 SNPPIHGARIVTEIL 479 (583)
Q Consensus 465 ~~~p~~g~~i~~~~l 479 (583)
...|..|.++|+.+.
T Consensus 322 ~~~~~~~~~~~~~~~ 336 (401)
T 1fc4_A 322 TLAGADHAIIPVMLG 336 (401)
T ss_dssp CBCCSSSSEEEEEEE
T ss_pred cccCCCCCEEEEEcC
Confidence 444677888877664
No 95
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.91 E-value=1.5e-23 Score=216.85 Aligned_cols=272 Identities=13% Similarity=0.065 Sum_probs=177.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
..|+|+.+... +|++.+.+++.+.... ...|.+..+..+||+++|++++. +++++ ++||+++
T Consensus 4 ~~i~~~~~~~~------~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g~--------~~~~~--~~~gt~a 65 (347)
T 1jg8_A 4 MMIDLRSDTVT------KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFGK--------EAALF--VPSGTMG 65 (347)
T ss_dssp -CEECSCGGGC------CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHH
T ss_pred eEEEeccccCC------CCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhCC--------ceEEE--ecCcHHH
Confidence 45778777763 2557788877654321 24688888999999999999863 35666 7777888
Q ss_pred HHHHHHHHHHhCCCCCEEEEcCCCChhhH---HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeC
Q psy14428 244 LRVGTAFLERFYPGVKTVYFPTPTWNGHV---RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQT 317 (583)
Q Consensus 244 l~l~~~~l~~~~~~gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~ 317 (583)
+.++ +..+..+||+|++++|+|.... ..++..|++++.+ . ++ ++.+|++.+++.+... .+++++++++
T Consensus 66 ~~~~---~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~-~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~ 139 (347)
T 1jg8_A 66 NQVS---IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-P-GK-NGAMDPDDVRKAIRPRNIHFPRTSLIAIE 139 (347)
T ss_dssp HHHH---HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-C-EE-TTEECHHHHHHHSCCSCTTSCCEEEEEEE
T ss_pred HHHH---HHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-c-CC-CCccCHHHHHHHhccccccccCceEEEEe
Confidence 8764 4455677999999999986532 3567789999888 4 33 3457999998887421 1268999999
Q ss_pred CCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEeccCCCC--CCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc
Q psy14428 318 SSHNPT-GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGL--TSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 318 ~p~NPT-G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l--~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi 394 (583)
+||||| |.+++.+++++|+++|+++|++||+|++|... .+.+ .+ ...+....+.+ +.||||.++++ +
T Consensus 140 ~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~--~~---~~~~~~~~d~~--~~s~sK~l~~~---~ 209 (347)
T 1jg8_A 140 NTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASG--VP---VKEYAGYADSV--MFCLSKGLCAP---V 209 (347)
T ss_dssp SSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHC--CC---HHHHHHTCSEE--EEESSSTTCCS---S
T ss_pred ccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcC--CC---hHHhcccccEE--EEecccccCCC---c
Confidence 999999 99999999999999999999999999987421 1111 11 22222233433 34899998743 7
Q ss_pred eE-EEEEcCCchhHHHHHHHHHHHHhccccCC--ChHHHHHHHHHhCC--hhhhhhhhhHHHHHHHHHHHHhhccC--CC
Q psy14428 395 GT-FSVLTPTSDETERIMSQLKILIRGFYSNP--PIHGARIVTEILSD--PKLKAQCDETERIMSQLKILIRGFYS--NP 467 (583)
Q Consensus 395 G~-lv~~~p~~~~~~~li~~l~~~~~~~~~~~--s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~~r~~~~--~~ 467 (583)
|| +++ + +++++++...+.....+. +.+.+.++...++. ..+++..++.+.+.+.++++ .+. ..
T Consensus 210 G~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~ 279 (347)
T 1jg8_A 210 GSVVVG--D-----RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI---GYSVNPE 279 (347)
T ss_dssp CEEEEE--C-----HHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHH---TCBCCGG
T ss_pred eEEEEc--C-----HHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccC
Confidence 85 455 4 578888876654443222 44555554444432 22333222222333333332 232 24
Q ss_pred ccchhhHHHHhc
Q psy14428 468 PIHGARIVTEIL 479 (583)
Q Consensus 468 p~~g~~i~~~~l 479 (583)
|..++++|..+.
T Consensus 280 ~~~~~~~~~~~~ 291 (347)
T 1jg8_A 280 DVKTNMVILRTD 291 (347)
T ss_dssp GCCSSEEEEECT
T ss_pred CCcceEEEEEcc
Confidence 567777777664
No 96
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.90 E-value=2.9e-23 Score=219.53 Aligned_cols=282 Identities=13% Similarity=0.147 Sum_probs=186.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|++.+.+....|. .++.+.+++.+.+.... ...+.+.....+|++.+++++. .++|++ |+|
T Consensus 37 ~g~~~lD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~v~~--~~g 104 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGH--AHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--------ADRVFF--CNS 104 (406)
T ss_dssp TCCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSS--------CSEEEE--ESS
T ss_pred CCCEEEECCCchhhcccCC--CCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCC--------CCeEEE--eCc
Confidence 3456789988865544453 35788888887775421 1111233335666666666642 358999 999
Q ss_pred chhHHHHHHHHHHHh----C-CCCCEEEEcCCCChhhHHHHhhcCC-------------eEEEEecccCCCCCCChhhHH
Q psy14428 240 GSGSLRVGTAFLERF----Y-PGVKTVYFPTPTWNGHVRFCTDSRL-------------NVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 240 ~~~al~l~~~~l~~~----~-~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~d~~~~g~d~~~l~ 301 (583)
+++|+.++..++... . +++|.|++++|+|..+.......+. .+..+|. .|++.++
T Consensus 105 g~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 177 (406)
T 4adb_A 105 GAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSAS 177 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHH
Confidence 999999864332211 0 3249999999999988655554443 3334433 2677776
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 302 EDIKAMPERSILFLQTSSHNPTGVDL--SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 302 ~~l~~~~~~~~~i~i~~p~NPTG~~~--s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
+.+ .+++++++++ |+||||.++ +.+++++|+++|+++|++||+||+|.+|.+.+. ..+...+ +...+++
T Consensus 178 ~~l---~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~~-~~~~d~~- 248 (406)
T 4adb_A 178 ALI---DDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE---LYAYMHY-GVTPDLL- 248 (406)
T ss_dssp TTC---STTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSHHHHH-TCCCSEE-
T ss_pred HHh---cCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch---hHHHHhc-CCCCCEE-
Confidence 665 4678888887 999999999 999999999999999999999999998877652 2223222 3334555
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhHHH-HHHH
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDETER-IMSQ 455 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~-~~~~ 455 (583)
||||.++ +|+|+||+++ + +++++.+........++.+.+.|.++...++ ++.+.++..+.++ +.+.
T Consensus 249 --t~sK~~~-~G~r~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~ 318 (406)
T 4adb_A 249 --TTAKALG-GGFPVGALLA--T-----EECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVER 318 (406)
T ss_dssp --EECGGGG-TTSCCEEEEE--C-----HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHH
T ss_pred --Eechhhc-CCCCeEEEEE--c-----HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 7799999 9999999999 6 5788888776666677889999999887765 3333333333332 2222
Q ss_pred HHHHHhh--ccCCCccchhhHHHHhcC
Q psy14428 456 LKILIRG--FYSNPPIHGARIVTEILS 480 (583)
Q Consensus 456 l~~~~r~--~~~~~p~~g~~i~~~~l~ 480 (583)
++.+... .+...+..|.+++..+..
T Consensus 319 l~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (406)
T 4adb_A 319 LNTINHRYGLFSEVRGLGLLIGCVLNA 345 (406)
T ss_dssp HHHHHHHHCCEEEEEEETTEEEEEECT
T ss_pred HHHHHHhCCCceEEEEEEEEEEEEEeC
Confidence 3332211 112233456666666544
No 97
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.90 E-value=3.3e-22 Score=211.36 Aligned_cols=230 Identities=12% Similarity=0.079 Sum_probs=172.4
Q ss_pred ccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC--CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA--NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 165 ~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
...++.++|+.. .+++..+.+.+++.........+.|. +..+..+|+++++++++. ++.++ +++|++
T Consensus 22 ~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--------~~~i~--~~sG~~ 90 (398)
T 2rfv_A 22 PSTGALSTPIFQ-TSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG--------EAGLA--TASGIS 90 (398)
T ss_dssp TTTCCSSCCCCC-CSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHH
T ss_pred cCCCCcCCCCcC-CCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHH
Confidence 346788888754 33445667777665221111234444 456678899999998852 13444 445559
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTS 318 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~ 318 (583)
|+.++ +..+..+||+|++++|+|..+...+ +..|++++.++. + |++.+++.+ .++++++++++
T Consensus 91 a~~~~---l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~------d~~~l~~~i---~~~~~~v~~~~ 157 (398)
T 2rfv_A 91 AITTT---LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA-A------KPEEIRAAM---RPETKVVYIET 157 (398)
T ss_dssp HHHHH---HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT-T------SHHHHHHHC---CTTEEEEEEES
T ss_pred HHHHH---HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC-C------CHHHHHHhc---CCCCeEEEEEC
Confidence 99885 4445667999999999999988876 788999999887 2 788888877 56789999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTF 397 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~l 397 (583)
||||||.+++ +++|+++|+++|+++|+||+|..+.+.. ++ ..+..+++.|+||.++.||+|+ ||+
T Consensus 158 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~------~~-----~~~~di~~~s~sK~~~~~g~~~~G~~ 223 (398)
T 2rfv_A 158 PANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ------PL-----QLGADIVVHSVTKYINGHGDVIGGII 223 (398)
T ss_dssp SBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC------GG-----GGTCSEEEEETTTTTTCSSCCCCEEE
T ss_pred CCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC------ch-----hhCCcEEEEeCcccccCCCCceEEEE
Confidence 9999999997 7788999999999999999999877642 11 1257799999999999999999 999
Q ss_pred EEEcCCchhHHHHHH-HHHHHHhcc-ccCCChHHHHHHHHHhCC
Q psy14428 398 SVLTPTSDETERIMS-QLKILIRGF-YSNPPIHGARIVTEILSD 439 (583)
Q Consensus 398 v~~~p~~~~~~~li~-~l~~~~~~~-~~~~s~~~q~~~~~~l~~ 439 (583)
++ + +++++ .+....... ..+.+.+.|.++...++.
T Consensus 224 ~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (398)
T 2rfv_A 224 VG--K-----QEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT 260 (398)
T ss_dssp EE--C-----HHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT
T ss_pred EE--C-----HHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh
Confidence 99 6 46776 566555544 567889999999888875
No 98
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.90 E-value=4.9e-23 Score=215.54 Aligned_cols=190 Identities=15% Similarity=0.097 Sum_probs=146.2
Q ss_pred CChHHHHHHHHHhccCC-------CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH-
Q psy14428 182 VLPSVKEAERRIYEKNL-------DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER- 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~-------~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~- 253 (583)
+++.+.+++.+...+.. ...|.+..|..+||++++++++ +++++|++ |+|+++|+.++...+..
T Consensus 13 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~--~~g~t~a~~~~~~~~~~~ 84 (384)
T 1eg5_A 13 VDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG------VSPSEIFF--TSCATESINWILKTVAET 84 (384)
T ss_dssp CCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------SCGGGEEE--ESCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcC------CCCCeEEE--ECCHHHHHHHHHHhhhhh
Confidence 56788888877765310 0113345677999999999995 45789999 99999999986433211
Q ss_pred hCCCCCEEEEcCCCChhhHHHH---hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q psy14428 254 FYPGVKTVYFPTPTWNGHVRFC---TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330 (583)
Q Consensus 254 ~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~ 330 (583)
...+||+|++++|+|+.+...+ +..|++++.+|+ ++ ++.+|++.+++.+ .++++++++++||||||.+++
T Consensus 85 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i---~~~~~~v~~~~~~nptG~~~~-- 157 (384)
T 1eg5_A 85 FEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPV-DS-RGVVKLEELEKLV---DEDTFLVSIMAANNEVGTIQP-- 157 (384)
T ss_dssp TTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCB-CT-TSCBCHHHHHHHC---CTTEEEEEEESBCTTTCBBCC--
T ss_pred ccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEcc-CC-CCccCHHHHHHHh---CCCCeEEEEECCCCCcccccC--
Confidence 0156999999999999886655 778999999998 54 4668999998887 457899999999999999999
Q ss_pred HHHHHHHHHHhcC--eEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 331 QWRQLAVVVKQRH--LYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 331 ~~~~l~~~a~~~~--i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+++|.++|++++ ++||+||+|. + +.. + ..+ ...+..+++.|+||.+|++| +||+++
T Consensus 158 -~~~i~~l~~~~~~~~~li~Dea~~-~--~~~--~-~~~----~~~~~di~~~s~sK~~g~~G--~G~~~~ 215 (384)
T 1eg5_A 158 -VEDVTRIVKKKNKETLVHVDAVQT-I--GKI--P-FSL----EKLEVDYASFSAHKFHGPKG--VGITYI 215 (384)
T ss_dssp -HHHHHHHHHHHCTTCEEEEECTTT-T--TTS--C-CCC----TTTCCSEEEEEGGGGTSCTT--CEEEEE
T ss_pred -HHHHHHHHHhcCCceEEEEEhhhh-c--CCc--c-cCc----hhcCCCEEEecHHHhcCCCc--eEEEEE
Confidence 567788899999 9999999997 2 221 1 111 12246789999999999889 799999
No 99
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.89 E-value=9e-23 Score=214.11 Aligned_cols=210 Identities=11% Similarity=0.042 Sum_probs=155.3
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCC---CC---CCCC-CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL---DH---EYAN-IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~---~~---~Y~~-~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
+.+.|..+.+. + +++.+.+++.+.+.... .. .|++ ..+..+||++++++++ +++++|++
T Consensus 16 ~~i~l~~~~~~-----~-~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g------~~~~~v~~-- 81 (390)
T 1elu_A 16 NKTYFNFGGQG-----I-LPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN------VDPNTITI-- 81 (390)
T ss_dssp TSEECCTTTCC-----C-CCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT------SCGGGEEE--
T ss_pred CeEEecCCccC-----C-CCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcC------CCHHHEEE--
Confidence 45666665431 1 34677777776664311 11 3544 4788999999999974 45779999
Q ss_pred cCCchhHHHHHHHHHHHh-CCCCCEEEEcCCCChhhHHH----HhhcCCeEEEEecccC-CCCCCChhhHHHHHHcCCCC
Q psy14428 237 GISGSGSLRVGTAFLERF-YPGVKTVYFPTPTWNGHVRF----CTDSRLNVGAYRYFDN-KTNGLDFAGMMEDIKAMPER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~v~~~d~-~~~g~d~~~l~~~l~~~~~~ 310 (583)
|+|+++++.++ +..+ ..+||+|++++|+|..+... ++..|++++.+|+ +. +++.+|++.+++.+ .++
T Consensus 82 ~~g~t~a~~~~---~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i---~~~ 154 (390)
T 1elu_A 82 TDNVTTGCDIV---LWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPV-AATLNQGDAAAVLANHL---GPK 154 (390)
T ss_dssp ESSHHHHHHHH---HHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECC-GGGSSSSCHHHHHHTTC---CTT
T ss_pred eCChHHHHHHH---HhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcC-CCCCCccchHHHHHHhc---CCC
Confidence 99999999985 4455 56799999999999997654 4667999999998 42 34678888887766 467
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHH----hcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 311 SILFLQTSSHNPTGVDLSEDQWRQLAVVVK----QRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 311 ~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~----~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
++++++++||||||.+++ +++|.++|+ ++|++||+||+|...... ..+ +..+..+++.|+||.
T Consensus 155 ~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~------~~~----~~~~~d~~~~s~~K~ 221 (390)
T 1elu_A 155 TRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSLP------LDF----SRLEVDYYAFTGHKW 221 (390)
T ss_dssp EEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTBC------CCT----TTSCCSEEEEESSST
T ss_pred ceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCcC------CCh----hhcCCCEEEcccccc
Confidence 899999999999999999 677788899 999999999999743221 011 223567899999994
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
+ ..|.++||+++ ++ ++++++.
T Consensus 222 ~-~~~~g~G~~~~--~~-----~~~~~~~ 242 (390)
T 1elu_A 222 F-AGPAGVGGLYI--HG-----DCLGEIN 242 (390)
T ss_dssp T-CCCTTCEEEEE--CT-----TTGGGCC
T ss_pred c-cCCCceEEEEE--CH-----HhHhhcC
Confidence 4 36778999999 63 4555544
No 100
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.89 E-value=2.7e-23 Score=215.45 Aligned_cols=223 Identities=13% Similarity=0.020 Sum_probs=163.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
..|..++|+.+... .+++.+.+++.+... +|.+..|..++++++++++.+.+| .++++|++ |+|+
T Consensus 11 ~~p~~i~l~~~~~~------~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~--~~g~ 75 (359)
T 1svv_A 11 AKPKPYSFVNDYSV------GMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHF--ISGG 75 (359)
T ss_dssp ----CEECSCSCSS------CCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEE--ESCH
T ss_pred CCCeeEEecCCCcC------CCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEE--eCCc
Confidence 34567888875542 256788888877653 477778888999999999887666 56789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH--HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC----CCCcEEE
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR--FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM----PERSILF 314 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~--~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~----~~~~~~i 314 (583)
++|+.++ +..+..+||+|++++|+|..+.. .++..|++++.+|. + ++++|++.+++.+++. ..+++++
T Consensus 76 t~a~~~~---~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~l~~~~~~~~~~~~~v 149 (359)
T 1svv_A 76 TQTNLIA---CSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPC-P--DGKLRVADIESALHENRSEHMVIPKLV 149 (359)
T ss_dssp HHHHHHH---HHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECC-T--TSCCCHHHHHHHHHHSCSTTSCEEEEE
T ss_pred hHHHHHH---HHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeC-C--CCeecHHHHHHHHHHHHhccCCCceEE
Confidence 9999985 44556679999999999999877 47889999999998 4 4789999999988642 1237888
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi 394 (583)
++++| ||||.+++.+++++|+++|+++|++||+||+|.++..+........+. + .. ..-++..|++|..+ ...+
T Consensus 150 ~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~-~~-~~d~~~~s~~K~g~--~~~~ 223 (359)
T 1svv_A 150 YISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLAD-I-AR-LTDMFYIGATKAGG--MFGE 223 (359)
T ss_dssp EEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHH-H-HH-HCSEEEEECTTTTC--SSCE
T ss_pred EEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhh-h-hh-cCCEEEEecccCCC--CCce
Confidence 88998 899999999999999999999999999999995442221101111111 0 01 12367788999643 3567
Q ss_pred eEEEEEcCCchhHHHHHHHHHHH
Q psy14428 395 GTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 395 G~lv~~~p~~~~~~~li~~l~~~ 417 (583)
|++++ + +++++++...
T Consensus 224 g~l~~--~-----~~~~~~~~~~ 239 (359)
T 1svv_A 224 ALIIL--N-----DALKPNARHL 239 (359)
T ss_dssp EEEEC--S-----GGGCTTHHHH
T ss_pred EEEEE--c-----ccHHHHHHHH
Confidence 88888 5 3566655543
No 101
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.89 E-value=2e-22 Score=212.23 Aligned_cols=280 Identities=11% Similarity=0.080 Sum_probs=187.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC-CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN-LDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~-~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
+...+|++.+.+....|. .++.+.+++.+..... ....+.+..-..+|++.++++++ ++++++ |+|+
T Consensus 35 g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~v~~--~~~g 102 (392)
T 3ruy_A 35 GNRYMDLLSAYSAVNQGH--RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--------KEMVLP--MNTG 102 (392)
T ss_dssp CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--------CSEEEE--ESSH
T ss_pred CCEEEEcCCChhhhccCC--CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--------CCEEEE--eCcH
Confidence 456788888876544443 3578888888776542 11111233445778888887763 579999 9999
Q ss_pred hhHHHHHHHHHHHh-------CCCCCEEEEcCCCChhhHHHHhhcCC-------------eEEEEecccCCCCCCChhhH
Q psy14428 241 SGSLRVGTAFLERF-------YPGVKTVYFPTPTWNGHVRFCTDSRL-------------NVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~-------~~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~d~~~~g~d~~~l 300 (583)
++|+.++..++... .+++|.|++++|+|..+...+...+. .+..++. .|++.+
T Consensus 103 t~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 175 (392)
T 3ruy_A 103 AEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEAL 175 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHH
Confidence 99999874433221 02367999999999766554443322 2333433 178888
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDLSEDQ-WRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~-~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
++.+ .++++++++++||||||.+++.++ +++|+++|+++|++||+||+|.+|.+.+. .. +... .+...++
T Consensus 176 ~~~l---~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~--~~-~~~~-~~~~~d~-- 246 (392)
T 3ruy_A 176 KAAI---TPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK--VF-ACDW-DNVTPDM-- 246 (392)
T ss_dssp HHHC---CTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS--SS-GGGG-GTCCCSE--
T ss_pred HHHh---ccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc--ch-hhhc-cCCCCCE--
Confidence 8877 478899999999999999996665 99999999999999999999998876652 11 1111 1222333
Q ss_pred EecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHH
Q psy14428 380 AQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKI 458 (583)
Q Consensus 380 i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 458 (583)
.||||.++ +| +|+||+++ + +++++.+........++.+.+.|.++...++....++..++.++..+.+.+
T Consensus 247 -~~~SK~l~-gG~~~~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~ 317 (392)
T 3ruy_A 247 -YILGKALG-GGVFPISCAAA--N-----RDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVG 317 (392)
T ss_dssp -EEECGGGG-TTTSCCEEEEE--C-----HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred -EEEchhhh-CChhhhEEEEE--C-----HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 37899876 46 99999999 6 578887776666667788999999999888743223333333334444444
Q ss_pred HHhhc----cCCCccchhhHHHHh
Q psy14428 459 LIRGF----YSNPPIHGARIVTEI 478 (583)
Q Consensus 459 ~~r~~----~~~~p~~g~~i~~~~ 478 (583)
.++.. ....+..|.++++.+
T Consensus 318 ~L~~~~~~~~~~~~~~g~~~~~~~ 341 (392)
T 3ruy_A 318 QLKEIDNPMITEVRGKGLFIGIEL 341 (392)
T ss_dssp HHTTCCCTTEEEEEEETTEEEEEE
T ss_pred HHHHhcCCCceEEEeeeeEEEEEE
Confidence 44332 223344566666654
No 102
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.89 E-value=1.3e-21 Score=210.32 Aligned_cols=226 Identities=12% Similarity=0.018 Sum_probs=165.0
Q ss_pred CCCCccccCCccc--cCCCC--CCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe
Q psy14428 161 PHPKKMNLGVGAY--RGEDG--KPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ 236 (583)
Q Consensus 161 ~~~~~i~l~~g~~--~~~~~--~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~ 236 (583)
++.+.++++.|.+ |...+ +..+.+.+.+++. .. ...|.+..|..+||++++++++. +++++
T Consensus 31 ~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~~--------~~~~~-- 95 (456)
T 2ez2_A 31 AGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFGF--------KHIVP-- 95 (456)
T ss_dssp TTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHCC--------SEEEE--
T ss_pred CCCCcccCCcccceeeeccccCCccCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhCC--------CcEEE--
Confidence 4556777877765 32111 1112345554443 22 34688888999999999999963 37888
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCC-hhhHHHHhhcCCeEEEEecccCC---------CCCCChhhHHHHHHc
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTW-NGHVRFCTDSRLNVGAYRYFDNK---------TNGLDFAGMMEDIKA 306 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y-~~~~~~~~~~G~~~~~v~~~d~~---------~~g~d~~~l~~~l~~ 306 (583)
|+||++|+.++ +..+..+|| ++++|+| ..+...++..|++++.+++ +++ ++++|++.+++.+..
T Consensus 96 ~~~gt~a~~~a---l~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~-~~~~~~~~~~~~~~~~d~~~l~~~i~~ 169 (456)
T 2ez2_A 96 THQGRGAENLL---SQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVR-DEAHDAGLNIAFKGDIDLKKLQKLIDE 169 (456)
T ss_dssp ESSHHHHHHHH---HHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBC-GGGGCTTCCCSCTTCBCHHHHHHHHHH
T ss_pred eCCcHHHHHHH---HHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecc-cccccccccccccCCCCHHHHHHHHHh
Confidence 99999999985 344567799 8889999 8888899999999999998 421 267899999998854
Q ss_pred CC-CCcEEEEeCCCCC-CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC----------CCCCCCCCchHHHHHHHHhc
Q psy14428 307 MP-ERSILFLQTSSHN-PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG----------LTSGDFDKDAFSLRYFAKEV 374 (583)
Q Consensus 307 ~~-~~~~~i~i~~p~N-PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~----------l~~~~~~~~~~~~~~~~~~~ 374 (583)
.+ .+.+++++++|+| |||.+++.+++++|+++|+++|++||+||+|.. +.+.+ ....++.......
T Consensus 170 ~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~ 247 (456)
T 2ez2_A 170 KGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFEN--KSIAEIVHEMFSY 247 (456)
T ss_dssp HCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTT--SCHHHHHHHHHTT
T ss_pred ccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCC--cchhhhhhhhccc
Confidence 32 2348899999999 999999999999999999999999999999986 55654 2222222111233
Q ss_pred CcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 375 GQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 375 ~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
.+++++ |++|..+ +| |.||+++ ++ +++++++....
T Consensus 248 ~d~~~~-S~kk~~~-~~-~gG~~~~--~~----~~~~~~~~~~~ 282 (456)
T 2ez2_A 248 ADGCTM-SGKKDCL-VN-IGGFLCM--ND----DEMFSSAKELV 282 (456)
T ss_dssp CSEEEE-ETTTTTC-CS-SCEEEEE--SC----HHHHHHHHHHH
T ss_pred CCEEEE-eCcccCC-CC-ceeEEEE--CC----HHHHHHHHHHH
Confidence 456666 7888765 77 8999998 54 46777776654
No 103
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.89 E-value=4.1e-21 Score=202.81 Aligned_cols=263 Identities=13% Similarity=0.025 Sum_probs=175.5
Q ss_pred ChHHHHHHHHHhcc-CC-----CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCC
Q psy14428 183 LPSVKEAERRIYEK-NL-----DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYP 256 (583)
Q Consensus 183 ~~~v~~a~~~~~~~-~~-----~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~ 256 (583)
++.+.+++.+.+.. .. ...|+...+..+||+++|++++. +++|++ |+|++ +...+..++... .
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~~i~~--~sG~~-a~~~~~~~l~~~-~ 130 (401)
T 2bwn_A 62 HPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-------EAALVF--SSAYN-ANDATLSTLRVL-F 130 (401)
T ss_dssp CHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-------SEEEEE--SCHHH-HHHHHHHHHHHH-S
T ss_pred CHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------CcEEEE--CCcHH-HHHHHHHHHhcC-C
Confidence 35677777766654 11 23466677899999999999852 478888 98887 555432222112 3
Q ss_pred CCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHH
Q psy14428 257 GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP-ERSILFLQTSSHNPTGVDLSEDQWRQL 335 (583)
Q Consensus 257 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~~s~~~~~~l 335 (583)
+||.|++++|+|..+...++..|++++.+|. + |++.+++.+++.. ++++++++++|+||||.+++ +++|
T Consensus 131 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i 200 (401)
T 2bwn_A 131 PGLIIYSDSLNHASMIEGIKRNAGPKRIFRH-N------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP---IKEI 200 (401)
T ss_dssp TTCEEEEETTCCHHHHHHHHHSCCCEEEECT-T------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC---HHHH
T ss_pred CCCEEEECchhhHHHHHHHHHcCCeEEEEcC-C------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC---HHHH
Confidence 5999999999999999999999999999887 2 6788888886544 47889999999999999998 6788
Q ss_pred HHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh-cCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 336 AVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE-VGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 336 ~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
+++|++++++||+||+|....++.. ....+ ...+. ...+++++||||+++++| ||+++ + +++++.+
T Consensus 201 ~~l~~~~~~~li~Dea~~~g~~~~~--g~~~~-~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~--~-----~~~~~~l 267 (401)
T 2bwn_A 201 CDIAEEFGALTYIDEVHAVGMYGPR--GAGVA-ERDGLMHRIDIFNGTLAKAYGVFG---GYIAA--S-----ARMVDAV 267 (401)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSSTT--SCCHH-HHHTCGGGCSEEEEESSSTTCSCC---EEEEE--C-----HHHHHHH
T ss_pred HHHHHHcCCEEEEeccccccccCCC--Cceee-eccCccccCcEEEeechhhccCCC---CEEec--C-----HHHHHHH
Confidence 9999999999999999996554321 11112 21121 134799999999999989 99999 6 5788887
Q ss_pred HHHHhc--cccCCChHHHHHHHHHh---CChhhhhhhhhHHHHHHHHHHHHhh-ccCCCccchhhHHHHhc
Q psy14428 415 KILIRG--FYSNPPIHGARIVTEIL---SDPKLKAQCDETERIMSQLKILIRG-FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 415 ~~~~~~--~~~~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~l~~~~r~-~~~~~p~~g~~i~~~~l 479 (583)
...... ...+.+.+.|.++...+ ++..+++..++.++..+.+.+.++. .+...+..+.++|+.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 338 (401)
T 2bwn_A 268 RSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSHIVPVVIG 338 (401)
T ss_dssp HHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSCEEEECC
T ss_pred HHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCeEEEEeC
Confidence 754322 12334557776555544 3332233333333322222222221 34433344556666543
No 104
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.89 E-value=2.1e-22 Score=215.03 Aligned_cols=296 Identities=11% Similarity=0.035 Sum_probs=182.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|++.+.+....|. .++.+.+++.+.++. ...|.+..+..++++++++++.+..+ ..+++|++ |+|+
T Consensus 27 ~g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~--~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~--~~gg 98 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGH--GRAEVGERMAAQAAR--LPFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWA--VSGG 98 (430)
T ss_dssp TSCEEEETTHHHHTCTTCB--CCHHHHHHHHHHHHH--CCCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEE--ESSH
T ss_pred CCCEEEECCCchhccccCC--CCHHHHHHHHHHHHh--cccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCcH
Confidence 3456789988876655664 257888887776654 23455556667777777777776544 45679999 9999
Q ss_pred hhHHHHHHHHHHHh-----CCCCCEEEEcCCCChhhHHHHhhcCC---------------eEEEEecccCC--CCCCChh
Q psy14428 241 SGSLRVGTAFLERF-----YPGVKTVYFPTPTWNGHVRFCTDSRL---------------NVGAYRYFDNK--TNGLDFA 298 (583)
Q Consensus 241 ~~al~l~~~~l~~~-----~~~gd~Vlv~~P~y~~~~~~~~~~G~---------------~~~~v~~~d~~--~~g~d~~ 298 (583)
++|+..+..++... .++++.|++.+|+|..+.......+. .+..+|. +.. ....|++
T Consensus 99 ~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 177 (430)
T 3i4j_A 99 SEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPK-PDPARNGAEDAE 177 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECC-CCTTSCHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCC-CcccchhhHHHH
Confidence 99999874443222 03478999999999988765554443 2222332 100 0012457
Q ss_pred hHHHHHHcCC-CCcEEEEeCCCCC-CCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcC
Q psy14428 299 GMMEDIKAMP-ERSILFLQTSSHN-PTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVG 375 (583)
Q Consensus 299 ~l~~~l~~~~-~~~~~i~i~~p~N-PTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 375 (583)
.+++.+++.. ++++++++..+|| |+|. +++++++++|.++|++||++||+||+|.+|...+. ..+...+. +
T Consensus 178 ~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~---~~~~~~~~---~ 251 (430)
T 3i4j_A 178 GLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS---PLALSRWS---G 251 (430)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGGGTT---T
T ss_pred HHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc---hhhhhhhc---C
Confidence 8888875432 3445555544455 7886 77899999999999999999999999999976551 11211110 1
Q ss_pred cEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH----HhccccCCChHHHHHHHHHhCC---hhhhhhhh
Q psy14428 376 QLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL----IRGFYSNPPIHGARIVTEILSD---PKLKAQCD 447 (583)
Q Consensus 376 ~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~----~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~ 447 (583)
....+.+|||.++ .| +|+||+++ + +++++.+.+. .....++.++++|.++..+++. +.+.++..
T Consensus 252 ~~~di~t~sK~l~-~G~~r~G~~~~--~-----~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 323 (430)
T 3i4j_A 252 VTPDIAVLGKGLA-AGYAPLAGLLA--A-----PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAK 323 (430)
T ss_dssp CCCSEEEECGGGT-TTSSCCEEEEE--C-----HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCCcEEEEccccc-CCccccEEEEE--C-----HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHH
Confidence 2222347999999 69 99999999 7 6899998874 3445568899999998888863 22322222
Q ss_pred hHH-HHHHHHHHHHhh--ccCCCccchhhHHHHhc
Q psy14428 448 ETE-RIMSQLKILIRG--FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 448 ~~~-~~~~~l~~~~r~--~~~~~p~~g~~i~~~~l 479 (583)
+.. ...+.++.+... .+...+..|.++++.+.
T Consensus 324 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 358 (430)
T 3i4j_A 324 ERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLG 358 (430)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEec
Confidence 222 222333333211 23345667888887664
No 105
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.88 E-value=1.9e-21 Score=207.62 Aligned_cols=237 Identities=14% Similarity=0.085 Sum_probs=167.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhcc-CC-CCCCCCCCC----CHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK-NL-DHEYANIGG----DAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~-~~-~~~Y~~~~G----~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
+...+||+.+.+ .+.+ +++.+.+++.+.+.. +. ...|....| ..+|+++++++++. ++.|++
T Consensus 63 g~~~id~~~~~~---lg~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~-------~~~i~~- 130 (427)
T 2w8t_A 63 GKDTILLGTYNY---MGMT-FDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGT-------TGAIVF- 130 (427)
T ss_dssp TEEEEECSCCCT---TCGG-GCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTC-------SEEEEE-
T ss_pred CceEEEEECccc---ccCC-CCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCC-------CceEEe-
Confidence 446789998864 1211 446777777766654 21 222333444 48899999999842 244554
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCC-CcEEE
Q psy14428 236 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE-RSILF 314 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~-~~~~i 314 (583)
++| ++++..+ +..+..+||.|+++.|+|..+...++..|++++.++. .|++.+++.+++..+ +++++
T Consensus 131 -~sG-s~a~~~a---l~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v 198 (427)
T 2w8t_A 131 -STG-YMANLGI---ISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLV 198 (427)
T ss_dssp -SCH-HHHHHHH---HHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEE
T ss_pred -cCc-HHHHHHH---HHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEE
Confidence 554 5577764 4446677999999999999999999999999988764 288999998875433 68899
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH-hcCcEEEEecCcccccccCcc
Q psy14428 315 LQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK-EVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 315 ~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~vi~i~S~SK~~~l~GlR 393 (583)
++++++||||.+++ +++|+++|+++|++||+||+|..+.++.. ..++....+ ..+.++++.||||.+|++|
T Consensus 199 ~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~---g~~~~~~~~~~~~~di~~~s~sK~~g~~g-- 270 (427)
T 2w8t_A 199 VLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPN---GRGVYEAQGLEGQIDFVVGTFSKSVGTVG-- 270 (427)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT---SCCHHHHTTCTTCCSEEEEESSSTTCSCC--
T ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCchHhhcCCCcCCcEEEecchhhhccCC--
Confidence 99999999999998 77889999999999999999999887631 112222222 2245899999999998777
Q ss_pred ceEEEEEcCCchhHHHHHHHHHHHHh-c-cccCCChHHHHHHHHHhC
Q psy14428 394 VGTFSVLTPTSDETERIMSQLKILIR-G-FYSNPPIHGARIVTEILS 438 (583)
Q Consensus 394 iG~lv~~~p~~~~~~~li~~l~~~~~-~-~~~~~s~~~q~~~~~~l~ 438 (583)
||+++ ++ ++++.+....+ . ...+.+.+.+.++...++
T Consensus 271 -G~v~~--~~-----~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~ 309 (427)
T 2w8t_A 271 -GFVVS--NH-----PKFEAVRLACRPYIFTASLPPSVVATATTSIR 309 (427)
T ss_dssp -EEEEE--CC-----TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHH
T ss_pred -CEEEe--CH-----HHHHHHHHhcccccccCCCCHHHHHHHHHHHH
Confidence 99999 63 57776665421 1 233456666655545554
No 106
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.88 E-value=1.4e-21 Score=205.51 Aligned_cols=186 Identities=15% Similarity=0.063 Sum_probs=148.6
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCCE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVKT 260 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd~ 260 (583)
..+.+.+++.+.+... ...|.+..+..+||++++++++.. +.|++ ++| ++|+.++ +..+ ..+||+
T Consensus 15 ~~~~~~~a~~~~l~~~-~~~~~~~~~~~~l~~~la~~~~~~-------~~i~~--~sG-t~al~~~---l~~l~~~~gd~ 80 (388)
T 1b9h_A 15 YDDAERNGLVRALEQG-QWWRMGGDEVNSFEREFAAHHGAA-------HALAV--TNG-THALELA---LQVMGVGPGTE 80 (388)
T ss_dssp CCHHHHHHHHHHHHTS-CCBTTTCSHHHHHHHHHHHHTTCS-------EEEEE--SCH-HHHHHHH---HHHTTCCTTCE
T ss_pred CCHHHHHHHHHHHHcC-CeeecCCHHHHHHHHHHHHHhCCC-------eEEEe--CCH-HHHHHHH---HHHcCCCCcCE
Confidence 4478888888877653 356778889999999999998632 56777 887 8999985 4455 677999
Q ss_pred EEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q psy14428 261 VYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVK 340 (583)
Q Consensus 261 Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~ 340 (583)
|++++|+|..+...++..|++++.+++ +++++++|++.+++.+ .+++++++ |+||||.+.+ +++|.++|+
T Consensus 81 Vi~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~i---~~~~~~v~---~~n~tG~~~~---l~~i~~la~ 150 (388)
T 1b9h_A 81 VIVPAFTFISSSQAAQRLGAVTVPVDV-DAATYNLDPEAVAAAV---TPRTKVIM---PVHMAGLMAD---MDALAKISA 150 (388)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCCBCHHHHHHHC---CTTEEEEC---CBCGGGCCCC---HHHHHHHHH
T ss_pred EEECCCccHHHHHHHHHcCCEEEEEec-CCCcCCCCHHHHHHhc---CcCceEEE---EeCCccCcCC---HHHHHHHHH
Confidence 999999999999999999999999999 6655789999998887 45677665 9999999976 567788899
Q ss_pred hcCeEEEEeccCCCC-CCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCC
Q psy14428 341 QRHLYPFFDMAYLGL-TSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPT 403 (583)
Q Consensus 341 ~~~i~iI~De~Y~~l-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~ 403 (583)
++|++||+||+|... .+.+ .+ + ... .++.+.||||..+++|.|+||+++ ++
T Consensus 151 ~~~~~li~D~a~~~g~~~~~--~~---~----~~~-~~i~~~S~s~~K~l~g~~~G~~~~--~~ 202 (388)
T 1b9h_A 151 DTGVPLLQDAAHAHGARWQG--KR---V----GEL-DSIATFSFQNGKLMTAGEGGAVVF--PD 202 (388)
T ss_dssp HHTCCBCEECTTCTTCEETT--EE---G----GGS-SSCEEEECCTTSSSCSSSCEEEEE--CT
T ss_pred HcCCEEEEecchhcCCccCC--ee---c----ccc-cceEEEEccCCCcccCCCeEEEEE--CC
Confidence 999999999999863 3332 11 1 111 268899999888888889999999 64
No 107
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.88 E-value=7.2e-22 Score=207.19 Aligned_cols=221 Identities=14% Similarity=0.076 Sum_probs=159.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
+++|++.+.+. +.+++.+.+++. .|. +...+.+.+++++.+..|.. +++++++ |+|+++|
T Consensus 29 ~v~~~~~~~~~-----~~~~~~v~~a~~---------~~~---~~~~~~~~~~~~~a~~~g~~-~~~~~~~--~~ggt~a 88 (374)
T 2aeu_A 29 ALYDLSGLSGG-----FLIDEKDKALLN---------TYI---GSSYFAEKVNEYGLKHLGGD-ENDKCVG--FNRTSSA 88 (374)
T ss_dssp GCEECSSCCCC-----CCCCHHHHHHHT---------STT---HHHHHHHHHHHHHHHHHTCC-TTEEEEE--ESSHHHH
T ss_pred ceeeecccCCC-----CCCCHHHHHHHH---------Hhc---CchHHHHHHHHHHHHHhCCC-CcceEEE--EcChHHH
Confidence 57898887753 225677777764 121 11344455555553333332 4578999 9999999
Q ss_pred HHHHHHHHHHhCCCCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEE-EEeCCC
Q psy14428 244 LRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSIL-FLQTSS 319 (583)
Q Consensus 244 l~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~-i~i~~p 319 (583)
+.++ +..+ +||+|++++|+|+.+.. .++..|++++.+ . |++.+++. .+++++ +++++|
T Consensus 89 ~~~~---~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-~--------d~~~l~~~----~~~~~~~v~~~~p 150 (374)
T 2aeu_A 89 ILAT---ILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES-D--------KVGEILNK----IDKDTLVIITGST 150 (374)
T ss_dssp HHHH---HHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE-S--------CHHHHHTT----CCTTEEEEEECBC
T ss_pred HHHH---HHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe-C--------CHHHHHhc----CCCccEEEEEccC
Confidence 9986 3345 59999999998876543 667789998877 2 66666554 356788 999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|||||. +.+++++|.++|+++|++||+||+|..+..+.. ....+. . .+..++++||||.+ +|+|+||+++
T Consensus 151 ~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~-~----~~~di~~~S~sK~l--~g~~~G~~~~ 220 (374)
T 2aeu_A 151 MDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLF-NQPPAL-K----LGADLVVTSTDKLM--EGPRGGLLAG 220 (374)
T ss_dssp TTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHT-TCCCHH-H----HTCSEEEEETTSSS--SSCSCEEEEE
T ss_pred CCCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccc-ccCCcc-c----cCCcEEEecCcccc--cCcceEEEEE
Confidence 999998 889999999999999999999999987641000 010011 1 13468899999985 6899999998
Q ss_pred EcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 400 LTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++++.........+++.+.|.++...+++
T Consensus 221 --~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~ 253 (374)
T 2aeu_A 221 --K-----KELVDKIYIEGTKFGLEAQPPLLAGIYRALKN 253 (374)
T ss_dssp --E-----HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHH
T ss_pred --C-----HHHHHHHHHhhccccCCCCHHHHHHHHHHHHH
Confidence 6 58999998877655667889999888888764
No 108
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.88 E-value=5.8e-22 Score=211.04 Aligned_cols=289 Identities=12% Similarity=-0.004 Sum_probs=177.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...+|++.+.+..+.|.+ .++.+.+++.+.+... ..|++..+..+++.++++.+.+..++.+ +++|++ |+|++
T Consensus 41 g~~~lD~~~~~~~~~lG~~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~--~~gg~ 114 (419)
T 2eo5_A 41 GNKYLDFTSGIGVNNLGWP-SHPEVIKIGIEQMQKL--AHAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFF--SNSGT 114 (419)
T ss_dssp SCEEEESSGGGGTTTTCBS-CCHHHHHHHHHHHTTS--CCCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEE--ESSHH
T ss_pred CCEEEEccCChhhhccCCC-CCHHHHHHHHHHHhhC--ccccccccCCHHHHHHHHHHHHhCCCCc-CCEEEE--eCchH
Confidence 3457899888876555532 1578888888777542 1233333333444555555544444443 789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-hc-------------CCeEEEEecccCCC--CC-----------
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DS-------------RLNVGAYRYFDNKT--NG----------- 294 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~-------------G~~~~~v~~~d~~~--~g----------- 294 (583)
+++.++..++..+ . ||.|++++|+|..+..... .. +..++.+|..+... +|
T Consensus 115 ea~~~ai~~~~~~-~-~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~ 192 (419)
T 2eo5_A 115 EAIEASIKVVKNT-G-RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELV 192 (419)
T ss_dssp HHHHHHHHHHHTT-S-CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHH
T ss_pred HHHHHHHHHHHHh-h-CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhH
Confidence 9999874433221 2 8999999999976543222 11 13567777722100 12
Q ss_pred -CChhhHH-HHHHcCC--CCcEEEEeCCCC-CCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 295 -LDFAGMM-EDIKAMP--ERSILFLQTSSH-NPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 295 -~d~~~l~-~~l~~~~--~~~~~i~i~~p~-NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
+|++.++ +.+.+.. ++++++ +++|+ ||||. +.+++++++|.++|+++|++||+||+|.+|.+.+. ...+.
T Consensus 193 ~~~~~~l~~~~i~~~~~~~~~~~v-i~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~---~~~~~ 268 (419)
T 2eo5_A 193 NRVIEFIEDYIFVNLVPPEEVAGI-FFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK---LFAIE 268 (419)
T ss_dssp HHHHHHHHHTHHHHTCCGGGEEEE-EECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGG
T ss_pred HHHHHHHHHHHHhhccCCCCEEEE-EEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc---hhhHH
Confidence 3577887 7775321 234444 45665 57896 77899999999999999999999999999876541 11111
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhh
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCD 447 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 447 (583)
. .+...+++ ||||.++ .| +|+||+++ + ++++ .+ ........+.++++|.++.++++.. ++..+
T Consensus 269 ~-~~~~~d~~---t~sK~~~-~G~~riG~~~~--~-----~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~~--~~~~~ 332 (419)
T 2eo5_A 269 N-FNTVPDVI---TLAKALG-GGIMPIGATIF--R-----KDLD-FK-PGMHSNTFGGNALACAIGSKVIDIV--KDLLP 332 (419)
T ss_dssp G-GTCCCSEE---EECGGGG-TTTSCCEEEEE--E-----GGGC-CC-------CCCCCHHHHHHHHHHHHHH--HHHHH
T ss_pred h-cCCCCCEE---Eeccccc-CCccceEEEEE--c-----hHhh-cC-CcccCCCCCCCHHHHHHHHHHHHHH--HHHHH
Confidence 1 12233433 8999999 59 99999999 6 2455 55 3233345678999999988888641 11222
Q ss_pred hHHHHHHHHHHHHhhccCCCccchhhHHHHh
Q psy14428 448 ETERIMSQLKILIRGFYSNPPIHGARIVTEI 478 (583)
Q Consensus 448 ~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~ 478 (583)
+.++..+.+.+.++..+...++.|+++++.+
T Consensus 333 ~~~~~~~~l~~~L~~~~~~~~~~g~~~~i~~ 363 (419)
T 2eo5_A 333 HVNEIGKIFAEELQGLADDVRGIGLAWGLEY 363 (419)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEEETTEEEEEC
T ss_pred HHHHHHHHHHHHHHHhhhheEeeeEEEEEEE
Confidence 2333333333333333333456688777655
No 109
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.88 E-value=2.5e-21 Score=203.54 Aligned_cols=197 Identities=12% Similarity=0.020 Sum_probs=146.7
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
+++.+.+++.+.... ...|....+..++|++++++++ +++++|++ |+|+++++.++ +..+..+||+|
T Consensus 20 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~--t~g~t~a~~~~---~~~~~~~gd~V 86 (392)
T 2z9v_A 20 AYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAMR------LSNKPVIL--HGEPVLGLEAA---AASLISPDDVV 86 (392)
T ss_dssp CCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHTT------CSSCCEEE--SSCTHHHHHHH---HHHHCCTTCCE
T ss_pred CCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHhC------CCCCEEEE--eCCchHHHHHH---HHHhcCCCCEE
Confidence 557777776554432 1112234467899999999875 34689999 99999999986 34446679999
Q ss_pred EEcCCCChhh--HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 262 YFPTPTWNGH--VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 262 lv~~P~y~~~--~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
++++|+|..+ ...++..|++++.+|+ +++ +.+|++.+++.+++ .++++++++++|+||||.+++ +++|.++|
T Consensus 87 l~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~-~~~d~~~l~~~l~~-~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 160 (392)
T 2z9v_A 87 LNLASGVYGKGFGYWAKRYSPHLLEIEV-PYN-EAIDPQAVADMLKA-HPEITVVSVCHHDTPSGTINP---IDAIGALV 160 (392)
T ss_dssp EEEESSHHHHHHHHHHHHHCSCEEEEEC-CTT-SCCCHHHHHHHHHH-CTTCCEEEEESEEGGGTEECC---HHHHHHHH
T ss_pred EEecCCcccHHHHHHHHHcCCceEEeeC-CCC-CCCCHHHHHHHHhc-CCCCcEEEEeccCCCCceecc---HHHHHHHH
Confidence 9999999765 3455668999999998 543 46899999998864 246788999999999999998 56888999
Q ss_pred HhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc-cccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 340 ~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
+++|++||+||+|...... ..+ ...+..+++.|+||.+ +.+|+ ||+++ + +++++++..
T Consensus 161 ~~~~~~li~D~a~~~g~~~------~~~----~~~~~d~~~~s~sK~~~~~~g~--G~l~~--~-----~~~~~~l~~ 219 (392)
T 2z9v_A 161 SAHGAYLIVDAVSSFGGMK------THP----EDCKADIYVTGPNKCLGAPPGL--TMMGV--S-----ERAWAKMKA 219 (392)
T ss_dssp HHTTCEEEEECTTTBTTBS------CCG----GGGTCSEEEECSSSTTCCCSCC--EEEEE--C-----HHHHHHHHT
T ss_pred HHcCCeEEEEcccccCCcc------ccc----ccccceEEEecCcccccCCCce--eEEEE--C-----HHHHHHhhh
Confidence 9999999999999742211 011 1224568899999965 44565 99999 6 577777764
No 110
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.88 E-value=5.1e-22 Score=212.64 Aligned_cols=293 Identities=12% Similarity=0.039 Sum_probs=189.6
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...+|++.+.+....|. .++.+.+++.+.+.. ...|....|..++++++++++.+..+... +++|++ |+||+
T Consensus 42 g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~--~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~--~~ggs 114 (439)
T 3dxv_A 42 GRELIDLSGAWGAASLGY--GHPAIVAAVSAAAAN--PAGATILSASNAPAVTLAERLLASFPGEG-THKIWF--GHSGS 114 (439)
T ss_dssp SCEEEESSTTTTTCTTCB--SCHHHHHHHHHHHHS--CSCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEE--ESSHH
T ss_pred CCEEEECCCchhhccCCC--CCHHHHHHHHHHHHh--ccCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEE--eCCHH
Confidence 456789998888666663 457888888777654 24466667778888888888887654322 169999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-CCeE--------------EEEecccCCCCCC----ChhhHHH
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-RLNV--------------GAYRYFDNKTNGL----DFAGMME 302 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~~~--------------~~v~~~d~~~~g~----d~~~l~~ 302 (583)
+|+..+..++..+.+ ++.|++.+|+|..+....... |... ..+|. +....+. |++.+++
T Consensus 115 ea~~~al~~~~~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~le~ 192 (439)
T 3dxv_A 115 DANEAAYRAIVKATG-RSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPY-RPYRNDPTGDAILTLLTE 192 (439)
T ss_dssp HHHHHHHHHHHHHHS-CCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSS-SCBTTBTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCC-CcccccccHHHHHHHHHH
Confidence 999987544333344 678999999986654444333 3221 22333 1111111 5788888
Q ss_pred HHH-cCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 303 DIK-AMPERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 303 ~l~-~~~~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
.++ ...++++++++.+++||+|.+. +.+.+++|.++|++||++||+||+|.+|...+. ...... .+...+++
T Consensus 193 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~---~~~~~~-~~~~~di~-- 266 (439)
T 3dxv_A 193 KLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR---LHCFEH-EGFVPDIL-- 266 (439)
T ss_dssp HHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS---SSGGGG-TTCCCSEE--
T ss_pred HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch---hhHHHh-cCCCCCEE--
Confidence 884 3345677888888888888766 455599999999999999999999998865541 111111 12223333
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC---hhhhhhhhhH-HHHHHHH
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD---PKLKAQCDET-ERIMSQL 456 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~-~~~~~~l 456 (583)
||||.++ +|+|+||+++ + +++++.+........+ .++++|.++...++. +.+.++..+. +...+.+
T Consensus 267 -s~sK~~~-~G~riG~~~~--~-----~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l 336 (439)
T 3dxv_A 267 -VLGKGLG-GGLPLSAVIA--P-----AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGL 336 (439)
T ss_dssp -EECGGGG-TTSCCEEEEE--E-----HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred -EEcchhc-CCcceEEEEE--C-----HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999 7999999999 6 5788877765444455 888999888877752 2222222222 2233333
Q ss_pred HHHHhh--ccCCCccchhhHHHHhc
Q psy14428 457 KILIRG--FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 457 ~~~~r~--~~~~~p~~g~~i~~~~l 479 (583)
..+... .....+..|.++++.+.
T Consensus 337 ~~~~~~~~~~~~~~~~g~~~~~~~~ 361 (439)
T 3dxv_A 337 SELAKRHPLIGDIRGRGLACGMELV 361 (439)
T ss_dssp HHHHHHCTTEEEEEEETTEEEEEEE
T ss_pred HHHHHhCCCeEEEEEEEEEEEEEEe
Confidence 333221 22344567888877663
No 111
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.88 E-value=4.6e-22 Score=208.73 Aligned_cols=275 Identities=12% Similarity=-0.017 Sum_probs=185.5
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-------
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF------- 254 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~------- 254 (583)
+++.+.+++.+.+... ...|....|..++++++.+++.+..+ +++++|++ |+|+++|+.++...+..-
T Consensus 42 ~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~--~~ggt~a~~~~~~~~~~~~~~~~~~ 116 (397)
T 3f9t_A 42 VLPITRKIVDIFLETN-LGDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHI--VSGGTEANLMALRCIKNIWREKRRK 116 (397)
T ss_dssp CCTHHHHHHHHHTTCC-TTSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEE--ESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEE--ecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 4567888877766542 12222223556666666666665544 45789999 999999999874443221
Q ss_pred ---CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH
Q psy14428 255 ---YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQ 331 (583)
Q Consensus 255 ---~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~ 331 (583)
..+||+|++++|+|..+...++..|++++.+|+ ++ ++.+|++.+++.+... +++++++++|+||||.+.+
T Consensus 117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~--- 189 (397)
T 3f9t_A 117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPI-KE-DYTIDEKFVKDAVEDY--DVDGIIGIAGTTELGTIDN--- 189 (397)
T ss_dssp TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECB-CT-TSSBCHHHHHHHHHHS--CCCEEEEEBSCTTTCCBCC---
T ss_pred cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEee-CC-CCcCCHHHHHHHHhhc--CCeEEEEECCCCCCCCCCC---
Confidence 124899999999999999999999999999998 54 4678999999998532 6788889999999999987
Q ss_pred HHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc------hHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCch
Q psy14428 332 WRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD------AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSD 405 (583)
Q Consensus 332 ~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~------~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~ 405 (583)
+++|.++|+++|++||+||+|..+..+..... ..++ . ... +..+++.|++|.++ +|.|+||+++ +++
T Consensus 190 l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~s~~K~~~-~~~~~g~~~~--~~~- 262 (397)
T 3f9t_A 190 IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-D-FSL-GVDSITIDPHKMGH-CPIPSGGILF--KDI- 262 (397)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-S-GGG-TCSEEECCTTTTTC-CCSSCEEEEE--SSG-
T ss_pred HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-c-ccc-cCCeEEEccccccC-CCCCceEEEE--eCH-
Confidence 66788999999999999999987654311000 0000 0 122 45688999999775 8889999999 653
Q ss_pred hHHHHHHHHHHHHhccc-----------cCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh-ccC-CCccchh
Q psy14428 406 ETERIMSQLKILIRGFY-----------SNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG-FYS-NPPIHGA 472 (583)
Q Consensus 406 ~~~~li~~l~~~~~~~~-----------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~-~~~-~~p~~g~ 472 (583)
.+++.+........ .+.+.+.|.++...+....++++.++.++..+.+.+.++. .+. ..+..+.
T Consensus 263 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 339 (397)
T 3f9t_A 263 ---GYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKENNFKPVIEPILN 339 (397)
T ss_dssp ---GGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSS
T ss_pred ---HHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCcc
Confidence 34444332211111 1235677888888777666666666665555555444433 333 3445566
Q ss_pred hHHHHh
Q psy14428 473 RIVTEI 478 (583)
Q Consensus 473 ~i~~~~ 478 (583)
++++..
T Consensus 340 ~~~~~~ 345 (397)
T 3f9t_A 340 IVAIED 345 (397)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 665443
No 112
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.88 E-value=8.2e-22 Score=203.81 Aligned_cols=182 Identities=18% Similarity=0.079 Sum_probs=135.4
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
+++.+.+++.+.... ...|....+..++|++++++++ +++++|++ |+|+++|+.++ +..+..+||+|
T Consensus 12 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g------~~~~~i~~--~~g~t~a~~~~---~~~~~~~gd~v 78 (352)
T 1iug_A 12 LHPKALEALARPQLH--HRTEAAREVFLKARGLLREAFR------TEGEVLIL--TGSGTLAMEAL---VKNLFAPGERV 78 (352)
T ss_dssp CCHHHHHHHHSCCCC--TTSHHHHHHHHHHHHHHHHHHT------CSSEEEEE--ESCHHHHHHHH---HHHHCCTTCEE
T ss_pred CCHHHHHHhccCCCC--ccCHHHHHHHHHHHHHHHHHhC------CCCceEEE--cCchHHHHHHH---HHhccCCCCeE
Confidence 557888887665432 1222223567899999999985 34689999 99999999986 44456679999
Q ss_pred EEcCCCChhhH--HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 262 YFPTPTWNGHV--RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 262 lv~~P~y~~~~--~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
++++|+|+.+. ..++..|++++.+++ ++ ++.+|++.+++ ++++++++++||||||.+++ +++|.++|
T Consensus 79 l~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~------~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 147 (352)
T 1iug_A 79 LVPVYGKFSERFYEIALEAGLVVERLDY-PY-GDTPRPEDVAK------EGYAGLLLVHSETSTGALAD---LPALARAF 147 (352)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCTTTSCC------SSCSEEEEESEETTTTEECC---HHHHHHHH
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEEeC-CC-CCCCCHHHHhc------cCCcEEEEEEecCCcceecC---HHHHHHHH
Confidence 99999998865 455668999999998 44 35678877644 45778999999999999998 56788899
Q ss_pred Hhc--CeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc-cccCccceEEEE
Q psy14428 340 KQR--HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM-GLYGERVGTFSV 399 (583)
Q Consensus 340 ~~~--~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~lv~ 399 (583)
+++ |++||+||+|..-... . .+ ...+..+++.|+||.+ +.+| +||+++
T Consensus 148 ~~~~~~~~li~D~a~~~~~~~-----~-~~----~~~~~d~~~~s~~K~~~~~~g--~G~~~~ 198 (352)
T 1iug_A 148 KEKNPEGLVGADMVTSLLVGE-----V-AL----EAMGVDAAASGSQKGLMCPPG--LGFVAL 198 (352)
T ss_dssp HHHCTTCEEEEECTTTBTTBC-----C-CS----GGGTCSEEEEESSSTTCCCSC--EEEEEE
T ss_pred HhhCCCCEEEEECCccccCcc-----e-ec----cccCeeEEEecCcccccCCCc--eeEEEE
Confidence 999 9999999998632111 0 11 1124568899999954 4334 799999
No 113
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.88 E-value=9.8e-22 Score=207.18 Aligned_cols=288 Identities=12% Similarity=0.042 Sum_probs=182.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC--CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL--DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+...+|++.+.+....+. +++.+.+++.+.+.... ...| +.....++++++++++ + +.+++|++ |+|
T Consensus 44 g~~~ld~~~~~~~~~~g~--~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~--~~g 112 (395)
T 1vef_A 44 GNEYIDCVGGYGVANLGH--GNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL----P--PELNRVFP--VNS 112 (395)
T ss_dssp SCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEE--ESS
T ss_pred CCEEEEccCccccccCCC--CCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc----C--CCcCEEEE--cCc
Confidence 345689988876544442 45788888877775421 1123 3444566666666654 2 35789999 999
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChh-hHHHHhhcCCeEEE---EecccCCC---CCCChhhHHHHHHcCCCCcE
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNG-HVRFCTDSRLNVGA---YRYFDNKT---NGLDFAGMMEDIKAMPERSI 312 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~~G~~~~~---v~~~d~~~---~g~d~~~l~~~l~~~~~~~~ 312 (583)
+++|+.++...+..+.+ ||.|++++|+|.. +...++..|.+.+. +|+ ..+. ...|++.+++.+ .++++
T Consensus 113 g~~a~~~al~~~~~~~~-~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~-~~~~~~~~~~d~~~l~~~i---~~~~~ 187 (395)
T 1vef_A 113 GTEANEAALKFARAHTG-RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPL-VEPVEFIPYNDVEALKRAV---DEETA 187 (395)
T ss_dssp HHHHHHHHHHHHHHHHS-CCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSC-SSCEEEECTTCHHHHHHHC---CTTEE
T ss_pred HHHHHHHHHHHHHHHhC-CCeEEEEcCCcCCCchhhhhhcCCcccccccCCC-CCCeeEeCCCcHHHHHHHh---ccCEE
Confidence 99999987443322234 8899999999965 45566667775221 111 0000 013788888877 45678
Q ss_pred EEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC
Q psy14428 313 LFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG 391 (583)
Q Consensus 313 ~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G 391 (583)
+++++.++||||.++ +.+++++|+++|+++|++||+||+|.+|.+.+. . .++.. .+...+++ ||||.++. |
T Consensus 188 ~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~--~-~~~~~-~~~~~d~~---s~sK~~~~-g 259 (395)
T 1vef_A 188 AVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK--R-FAFEH-FGIVPDIL---TLAKALGG-G 259 (395)
T ss_dssp EEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--S-STHHH-HTCCCSEE---EECGGGGT-T
T ss_pred EEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc--h-hHhhh-cCCCCCEE---EEcccccC-C
Confidence 888777789999765 789999999999999999999999998765441 1 12222 12223444 88999994 9
Q ss_pred ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc-cC---CC
Q psy14428 392 ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF-YS---NP 467 (583)
Q Consensus 392 lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~-~~---~~ 467 (583)
+|+||+++ + +++++++.........+.+.+.|.++...++.-.-+...++.++..+.+.+.++.. .. ..
T Consensus 260 ~~~G~~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 332 (395)
T 1vef_A 260 VPLGVAVM--R-----EEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPKIREV 332 (395)
T ss_dssp SSCEEEEE--E-----HHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred CceEEEEe--h-----HHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCceEEE
Confidence 99999999 6 46777665532334556788888888777653211222222333333333333322 11 23
Q ss_pred ccchhhHHHHhcC
Q psy14428 468 PIHGARIVTEILS 480 (583)
Q Consensus 468 p~~g~~i~~~~l~ 480 (583)
+..|.++|+.+..
T Consensus 333 ~~~g~~~~~~~~~ 345 (395)
T 1vef_A 333 RGMGLMVGLELKE 345 (395)
T ss_dssp EEETTEEEEEESS
T ss_pred EEEEEEEEEEEcC
Confidence 4567777776543
No 114
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.87 E-value=9.5e-21 Score=200.74 Aligned_cols=236 Identities=12% Similarity=-0.043 Sum_probs=162.4
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccC--CCCCC----CCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEE
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN--LDHEY----ANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIV 235 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~--~~~~Y----~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~ 235 (583)
+...+||+...+. +.+ .++.+.+++.+.+... ....| .......+|+++++++++.. +.|++
T Consensus 58 g~~~ld~~s~~~l---~~~-~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-------~~i~~- 125 (409)
T 3kki_A 58 SPDDIILQSNDYL---ALA-NHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFD-------ECLLS- 125 (409)
T ss_dssp CTTSEECCCSCTT---CCT-TCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCS-------EEEEE-
T ss_pred CCceEEeeccCcc---CCc-CCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCC-------eEEEe-
Confidence 4567888766542 212 3477888877776541 11122 23344678999999988532 23544
Q ss_pred ecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEE
Q psy14428 236 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFL 315 (583)
Q Consensus 236 ~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~ 315 (583)
++| ++++..+ +..+..+||.|++++|+|..+...++..|++++.++. .|++.+++.+.+ .++++++
T Consensus 126 -~sG-t~a~~~~---l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~--~~~~~vi 191 (409)
T 3kki_A 126 -QSG-WNANVGL---LQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQR--HGPGIIV 191 (409)
T ss_dssp -SCH-HHHHHHH---HHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHH--HCSCEEE
T ss_pred -cch-HHHHHHH---HHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHh--cCCeEEE
Confidence 555 5888764 4556778999999999999999999999999987764 278999988853 2458999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccce
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG 395 (583)
+++||||||.+++ +++|+++|+++|++||+||+|.+..++.. .......+.-..+..|++.||||+++++ .|
T Consensus 192 ~~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~--g~~~~~~~~~~~~~di~~~s~sK~~~~~---gg 263 (409)
T 3kki_A 192 VDSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPN--GAGLLAELGLTREVHFMTASLAKTFAYR---AG 263 (409)
T ss_dssp EESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGG--GCCHHHHHTCGGGCSEEEEESSSTTCSS---CE
T ss_pred ECCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCC--CCcchhhcCCCCCCCEEEeecchhhCCC---ce
Confidence 9999999999999 77889999999999999999998665421 1112222211123458999999999966 49
Q ss_pred EEEEEcCCchhHHHHHHHHHHHHhcc--ccCCChHHHHHHHHHhC
Q psy14428 396 TFSVLTPTSDETERIMSQLKILIRGF--YSNPPIHGARIVTEILS 438 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~~l~~~~~~~--~~~~s~~~q~~~~~~l~ 438 (583)
|+++ ++ ++++.+....... ....+.+.+.++...++
T Consensus 264 ~v~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~ 301 (409)
T 3kki_A 264 AIWC--NN-----EVNRCVPFISYPAIFSSTLLPYEAAGLETTLE 301 (409)
T ss_dssp EEEE--SS-----SGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHH
T ss_pred EEEE--CH-----HHHHHHHHhCcCccccCCCcHHHHHHHHHHHH
Confidence 9999 63 5666666543222 22345555555555554
No 115
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.87 E-value=1.5e-21 Score=208.03 Aligned_cols=283 Identities=12% Similarity=0.099 Sum_probs=180.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|++.|.+....|. .++.+.+++.+.++.. ..++ ..+..++++++++.+.+..| .++|++ |+|+
T Consensus 55 ~g~~~lD~~~~~~~~~lG~--~~p~v~~ai~~~~~~~--~~~~-~~~~~~~~~~l~~~la~~~g----~~~v~~--~~gg 123 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGH--CHPALVEALKSQGETL--WHTS-NVFTNEPALRLGRKLIDATF----AERVLF--MNSG 123 (420)
T ss_dssp TCCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTC--CCCC-TTSCCHHHHHHHHHHHHHSS----CSEEEE--ESSH
T ss_pred CCCEEEEccccccccccCC--CCHHHHHHHHHHHHhc--cccc-CccCCHHHHHHHHHHHhhCC----CCeEEE--eCCH
Confidence 3456789988876554453 4578888888777542 1111 11223455555555544333 479999 9999
Q ss_pred hhHHHHHHHHHHHhC----CCC-CEEEEcCCCChhhHH-HHhhcCCe------------EEEEecccCCCCCCChhhHHH
Q psy14428 241 SGSLRVGTAFLERFY----PGV-KTVYFPTPTWNGHVR-FCTDSRLN------------VGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 241 ~~al~l~~~~l~~~~----~~g-d~Vlv~~P~y~~~~~-~~~~~G~~------------~~~v~~~d~~~~g~d~~~l~~ 302 (583)
++|++++..++.... .+| +.|++++|+|..+.. .+...|.+ +..+|. .|++.+++
T Consensus 124 teA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~ 196 (420)
T 2pb2_A 124 TEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKA 196 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHH
Confidence 999998744332210 035 599999999977643 44445543 444443 17888888
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEe
Q psy14428 303 DIKAMPERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQ 381 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~ 381 (583)
.+ .+++++++++++|||+|. +++.+.+++|.++|+++|++||+||+|.+|.+.+ ...+... .+...+++
T Consensus 197 ~i---~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g---~~~~~~~-~~~~~dii--- 266 (420)
T 2pb2_A 197 VM---DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTG---DLFAYMH-YGVTPDIL--- 266 (420)
T ss_dssp HC---CTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHH-HTCCCSEE---
T ss_pred Hh---ccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCC---cHHHHHh-cCCCCCeE---
Confidence 77 457888888888888784 6999999999999999999999999999887654 1222222 22234554
Q ss_pred cCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhHHHH-HHHHH
Q psy14428 382 SFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDETERI-MSQLK 457 (583)
Q Consensus 382 S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~-~~~l~ 457 (583)
||||.++ +|+|+||+++ + +++++.+........++.+.++|.++...++ ++.+.++..+.+.. .+.++
T Consensus 267 t~sK~l~-~G~~iG~~~~--~-----~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~ 338 (420)
T 2pb2_A 267 TSAKALG-GGFPVSAMLT--T-----QEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQ 338 (420)
T ss_dssp EECGGGG-TTSCCEEEEE--C-----HHHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHH
T ss_pred Eeccccc-CCCceEEEEE--h-----HHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 7899999 9999999999 6 4677766553344456788999988877664 33344433333322 22333
Q ss_pred HHHh--hccCCCccchhhHHHHhc
Q psy14428 458 ILIR--GFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 458 ~~~r--~~~~~~p~~g~~i~~~~l 479 (583)
.+.. ......+..|.++++.+.
T Consensus 339 ~~~~~~~~~~~~~~~g~~~~v~~~ 362 (420)
T 2pb2_A 339 AIDEQFDIFSDIRGMGLLIGAELK 362 (420)
T ss_dssp HHHHHHCCEEEEEEETTEEEEEEC
T ss_pred HHHhcCCCeEEEEecceEEEEEEC
Confidence 3211 111223445777776553
No 116
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.87 E-value=2.9e-21 Score=205.23 Aligned_cols=204 Identities=13% Similarity=0.045 Sum_probs=149.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCC----------CCCCCCHHHHHHHHHHHhCCCCCCCCCCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEY----------ANIGGDAKFCKLAAQLAYGEDFPAFKDNR 231 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y----------~~~~G~~~Lr~aia~~~~~~~g~~~~~~~ 231 (583)
.++.+.|..+... .+++.+.+++.+.+.......+ ....+..++++.+++++. +++++
T Consensus 20 ~~~~iyld~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~ 87 (423)
T 3lvm_A 20 MKLPIYLDYSATT------PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVG------ADPRE 87 (423)
T ss_dssp CCSSEECBTTTCC------CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT------CCGGG
T ss_pred cCCCEeecCCCcC------CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcC------CCCCe
Confidence 4455555544331 2467888887766541001111 112344788888888875 35789
Q ss_pred eEEEecCCchhHHHHHHHHHHH-hCCCCCEEEEcCCCChhhHHHH---hhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 232 LAIVQGISGSGSLRVGTAFLER-FYPGVKTVYFPTPTWNGHVRFC---TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 232 I~i~~t~G~~~al~l~~~~l~~-~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
|++ |+|+++|+.++...+.. +.++||+|++++|+|+.+...+ +..|++++.+|+ ++ ++.+|++.+++.+
T Consensus 88 v~~--~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i--- 160 (423)
T 3lvm_A 88 IVF--TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAP-QR-NGIIDLKELEAAM--- 160 (423)
T ss_dssp EEE--ESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECC-CT-TSCCCHHHHHHHC---
T ss_pred EEE--eCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEecc-CC-CCccCHHHHHHhc---
Confidence 999 99999999986443321 2346999999999999988777 445999999998 54 4678999999887
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc
Q psy14428 308 PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM 387 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~ 387 (583)
.++++++++++||||||.+++ +++|+++|+++|++||+||+|......- . ....+..+++.||||.+
T Consensus 161 ~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~------~----~~~~~~di~~~s~sK~~ 227 (423)
T 3lvm_A 161 RDDTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLPI------D----LSQLKVDLMSFSGHKIY 227 (423)
T ss_dssp CTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSCC------C----TTTSCCSEEEEESTTTT
T ss_pred CCCcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCCc------C----hhhcCCCEEEechHHhc
Confidence 567899999999999999999 5668899999999999999987533211 1 12234568999999998
Q ss_pred cccCccceEEEE
Q psy14428 388 GLYGERVGTFSV 399 (583)
Q Consensus 388 ~l~GlRiG~lv~ 399 (583)
|.+| +||+++
T Consensus 228 g~~g--~G~~~~ 237 (423)
T 3lvm_A 228 GPKG--IGALYV 237 (423)
T ss_dssp SCSS--CEEEEE
T ss_pred CCCC--eEEEEE
Confidence 8777 899999
No 117
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.87 E-value=2.3e-21 Score=204.08 Aligned_cols=195 Identities=7% Similarity=0.013 Sum_probs=144.8
Q ss_pred CChHHHHHHHHHhccCCCCCCCCC--CCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecCCchhHHHHHHHHHHHhCCCC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANI--GGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGISGSGSLRVGTAFLERFYPGV 258 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~--~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~G~~~al~l~~~~l~~~~~~g 258 (583)
+++.+.+++.+.. ..+|.+. ....+||++++++++. +++ +|++ |+|+++++.++ +..+..+|
T Consensus 29 ~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~~~------~~~~~v~~--~~g~t~al~~~---~~~~~~~g 93 (396)
T 2ch1_A 29 CSKRVLTAMTNTV----LSNFHAELFRTMDEVKDGLRYIFQT------ENRATMCV--SGSAHAGMEAM---LSNLLEEG 93 (396)
T ss_dssp CCHHHHHHTTSCC----CCTTCHHHHHHHHHHHHHHHHHHTC------CCSCEEEE--SSCHHHHHHHH---HHHHCCTT
T ss_pred CCHHHHHHhcccc----ccCCChhHHHHHHHHHHHHHHHhCC------CCCcEEEE--CCcHHHHHHHH---HHHhcCCC
Confidence 4567777654432 2235442 2378999999999963 456 8999 99999999985 44456679
Q ss_pred CEEEEcCCCChhhH--HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q psy14428 259 KTVYFPTPTWNGHV--RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336 (583)
Q Consensus 259 d~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~ 336 (583)
|+|++++|+|..+. ..++..|++++.+++ ++ ++.+|++.+++.+... +++++++++||||||.+++ +++|+
T Consensus 94 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---~~~i~ 166 (396)
T 2ch1_A 94 DRVLIAVNGIWAERAVEMSERYGADVRTIEG-PP-DRPFSLETLARAIELH--QPKCLFLTHGDSSSGLLQP---LEGVG 166 (396)
T ss_dssp CEEEEEESSHHHHHHHHHHHHTTCEEEEEEC-CT-TSCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC---CTTHH
T ss_pred CeEEEEcCCcccHHHHHHHHHcCCceEEecC-CC-CCCCCHHHHHHHHHhC--CCCEEEEECCCCCCceecC---HHHHH
Confidence 99999999999985 477889999999998 54 4678999999988531 5778889999999999999 67889
Q ss_pred HHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
++|+++|++||+||+|.. +.. +. .+ +..+..+++.|++|.++ .+.++|++++ + +++++.+..
T Consensus 167 ~l~~~~~~~li~Dea~~~---g~~--~~-~~----~~~~~d~~~~s~~K~~~-~~~g~g~~~~--~-----~~~~~~~~~ 228 (396)
T 2ch1_A 167 QICHQHDCLLIVDAVASL---CGV--PF-YM----DKWEIDAVYTGAQKVLG-APPGITPISI--S-----PKALDVIRN 228 (396)
T ss_dssp HHHHHTTCEEEEECTTTB---TTB--CC-CT----TTTTCCEEECCCC-CCC-CCSSCEEEEE--C-----HHHHHHHHT
T ss_pred HHHHHcCCEEEEEccccc---cCC--cc-ch----hhcCcCEEEEcCCcccc-CCCCeEEEEE--C-----HHHHHhhhh
Confidence 999999999999999982 211 11 11 11223456689999875 4456699999 6 467777654
No 118
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.87 E-value=1.5e-21 Score=210.26 Aligned_cols=200 Identities=14% Similarity=0.106 Sum_probs=157.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---- 274 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---- 274 (583)
.+.|+ ..|.+ +++++++++.+.+|. +++++ ++||++|+.++ +. +..+||+|++++|+|..+...
T Consensus 124 ~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~--~~sGt~al~~~---l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~ 191 (464)
T 1ibj_A 124 PYDYT-RSGNP-TRDALESLLAKLDKA----DRAFC--FTSGMAALSAV---TH-LIKNGEEIVAGDDVYGGSDRLLSQV 191 (464)
T ss_dssp SCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEE--ESSHHHHHHHH---HT-TSCTTCEEEEESSCCHHHHHHHHHT
T ss_pred Ccccc-CCCCH-HHHHHHHHHHHHhCC----CeEEE--ECCHHHHHHHH---HH-HhCCCCEEEEECCCchhHHHHHHHH
Confidence 45676 56766 788888877765553 36677 77778888764 33 567799999999999999764
Q ss_pred HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC
Q psy14428 275 CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG 354 (583)
Q Consensus 275 ~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~ 354 (583)
++..|++++.+++ + |++.+++.+ .++++++++++||||||.+++ +++|+++|+++|++||+||+|..
T Consensus 192 ~~~~G~~v~~v~~-~------d~~~l~~~i---~~~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~ 258 (464)
T 1ibj_A 192 VPRSGVVVKRVNT-T------KLDEVAAAI---GPQTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMS 258 (464)
T ss_dssp SGGGTCEEEEECT-T------SHHHHHHHC---CSSEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTC
T ss_pred HHHcCCEEEEeCC-C------CHHHHHHHh---ccCceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcc
Confidence 5667999999887 2 788888877 567899999999999999996 77889999999999999999975
Q ss_pred CCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc-CccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHH
Q psy14428 355 LTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY-GERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIV 433 (583)
Q Consensus 355 l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~-GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~ 433 (583)
..... ++ + .+..+++.|+||.++.+ |+|+||+++ ++ +++++++.........+.+.+.|+++
T Consensus 259 g~~~~------~~----~-~~~div~~S~sK~~~g~~Gl~~G~l~~--~~----~~l~~~l~~~~~~~g~~~~~~~~~a~ 321 (464)
T 1ibj_A 259 PVLSR------PL----E-LGADIVMHSATKFIAGHSDVMAGVLAV--KG----EKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_dssp TTTCC------GG----G-TTCSEEEEETTTTTTCSSCCCCEEEEE--CS----HHHHHHHHHHHHHTTCBCCHHHHHHH
T ss_pred cccCC------hh----h-cCCEEEEECCcccccCCCCCcEEEEEE--Ch----HHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 32211 11 1 36789999999999754 999999999 64 36888888776656677889999998
Q ss_pred HHHhCCh
Q psy14428 434 TEILSDP 440 (583)
Q Consensus 434 ~~~l~~~ 440 (583)
...+++.
T Consensus 322 ~~al~~~ 328 (464)
T 1ibj_A 322 LRGIKTM 328 (464)
T ss_dssp HHHHTTH
T ss_pred HhchhhH
Confidence 8888753
No 119
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.87 E-value=3.8e-21 Score=202.16 Aligned_cols=208 Identities=13% Similarity=0.089 Sum_probs=153.7
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC--CCCCCHHHHHHHHHHHhCCCCCCCCCC-CeEEEecC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA--NIGGDAKFCKLAAQLAYGEDFPAFKDN-RLAIVQGI 238 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~Lr~aia~~~~~~~g~~~~~~-~I~i~~t~ 238 (583)
.+..+++..|.. .+++.+.+++.+.... .|. +..+..++|++++++++. +++ +|++ |+
T Consensus 17 ~~~~~~~~~g~~-------~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~------~~~~~i~~--~~ 77 (393)
T 2huf_A 17 TPNKLLMGPGPS-------NAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLFQT------NNIATFCL--SA 77 (393)
T ss_dssp CCCCEECSSSCC-------CCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHHTC------CCSEEEEE--SS
T ss_pred CCCeEEecCCCC-------CCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHhCC------CCCcEEEE--cC
Confidence 345566655532 2457777776554322 243 235678999999999852 344 8999 99
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh--HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEe
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH--VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQ 316 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i 316 (583)
|+++|+.++ +..+..+||+|++++|+|..+ ...++..|++++.+|+ ++ ++.+|++.+++.+... +++++++
T Consensus 78 g~t~a~~~~---~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~--~~~~v~~ 150 (393)
T 2huf_A 78 SGHGGMEAT---LCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKS-KV-GQSLSLDEIRDALLIH--KPSVLFL 150 (393)
T ss_dssp CHHHHHHHH---HHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCHHHHHHHHHHH--CCSEEEE
T ss_pred cHHHHHHHH---HHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeC-CC-CCCCCHHHHHHHHhcc--CCcEEEE
Confidence 999999986 444566799999999999874 3455668999999998 54 3568999999988421 5788889
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccc-ccccCccce
Q psy14428 317 TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN-MGLYGERVG 395 (583)
Q Consensus 317 ~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~-~~l~GlRiG 395 (583)
++||||||.+++ +++|+++|+++|++||+||++..... + ..+ ...+..+++.|+||. +|++|+ |
T Consensus 151 ~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~~~~~-----~-~~~----~~~~~d~~~~s~sK~l~g~~G~--G 215 (393)
T 2huf_A 151 TQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVASLGGA-----P-MFM----DRWEIDAMYTGSQKVLGAPPGI--T 215 (393)
T ss_dssp ESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTBTTB-----C-CCT----TTTTCSEEECCSSSTTCCCSSC--E
T ss_pred EccCCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCC-----C-cch----hhcCccEEEECCCcccccCCCe--E
Confidence 999999999998 67889999999999999999753211 1 111 123467889999997 567888 9
Q ss_pred EEEEEcCCchhHHHHHHHHHHH
Q psy14428 396 TFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~~l~~~ 417 (583)
|+++ + +++++++...
T Consensus 216 ~~~~--~-----~~~~~~~~~~ 230 (393)
T 2huf_A 216 PVSF--S-----HRAVERYKRR 230 (393)
T ss_dssp EEEE--C-----HHHHHHHHTC
T ss_pred EEEE--C-----HHHHHHHhhc
Confidence 9999 6 5788887754
No 120
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.87 E-value=2.6e-21 Score=202.31 Aligned_cols=196 Identities=12% Similarity=0.015 Sum_probs=145.7
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
+++.+.+++.+.... ...+.......++|++++++++. +.++++|++ |+|+++++. + + ..+..+||+|
T Consensus 13 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~----~~~~~~v~~--~~g~t~al~-~--~-~~~~~~gd~v 80 (384)
T 3zrp_A 13 IKEDVLVAGLENNVG--FTSKEFVEALAYSLKGLRYVMGA----SKNYQPLII--PGGGTSAME-S--V-TSLLKPNDKI 80 (384)
T ss_dssp CCHHHHHHTTCCSCC--TTSHHHHHHHHHHHHHHHHHHTC----CTTSEEEEE--ESCHHHHHH-H--G-GGGCCTTCEE
T ss_pred CCHHHHHHhhccccc--cccHHHHHHHHHHHHHHHHHhCC----CCCCcEEEE--cCCcHHHHH-H--H-HhhcCCCCEE
Confidence 456777765443321 11122234567788888888852 223388999 999999999 6 2 3456779999
Q ss_pred EEcCCCChh--hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 262 YFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 262 lv~~P~y~~--~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
++++|+|.. +...++..|++++.+|+ +. ++.+|++.+++.+.. .+++++++++||||||.+++ +++|.++|
T Consensus 81 i~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 153 (384)
T 3zrp_A 81 LVVSNGVFGDRWEQIFKRYPVNVKVLRP-SP-GDYVKPGEVEEEVRK--SEYKLVALTHVETSTGVREP---VKDVINKI 153 (384)
T ss_dssp EEECSSHHHHHHHHHHTTSSCEEEEECC-ST-TCCCCHHHHHHHHHH--SCEEEEEEESEETTTTEECC---HHHHHHHH
T ss_pred EEecCCcchHHHHHHHHHcCCcEEEecC-CC-CCCCCHHHHHHHHHh--CCCcEEEEeCCCCCCceECc---HHHHHHHH
Confidence 999999954 66777889999999998 54 457899999999853 25899999999999999998 66789999
Q ss_pred HhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHH
Q psy14428 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQL 414 (583)
Q Consensus 340 ~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l 414 (583)
+++|++||+|+++......- + + +..+..+++.|+||.++ .+.++||+++ + +++++++
T Consensus 154 ~~~~~~li~D~a~~~~~~~~---~---~----~~~~~d~~~~s~~K~~~-~~~g~g~~~~--~-----~~~~~~~ 210 (384)
T 3zrp_A 154 RKYVELIVVDGVSSVGAEEV---K---A----EEWNVDVYLTASQKALG-SAAGLGLLLL--S-----PKALSIL 210 (384)
T ss_dssp GGGEEEEEEECTTTTTTSCC---C---T----TTTTCSEEEEETTSTTC-CCSSEEEEEE--C-----HHHHHHH
T ss_pred HhcCCEEEEECcccccCccc---c---c----cccCCCEEEecCccccc-CCCceEEEEE--C-----HHHHHHh
Confidence 99999999999987543321 1 1 12346789999999885 3455999999 6 5677776
No 121
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.87 E-value=2.8e-21 Score=200.57 Aligned_cols=207 Identities=14% Similarity=-0.032 Sum_probs=150.6
Q ss_pred ccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCC-C-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYAN-I-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 165 ~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
.++++.| |. . +++.+.+++.+.. .+.|+. . .+..++|++++++++ .+.++++|++ |+|+++
T Consensus 5 ~~~~~~g-p~---~---~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~--~~g~t~ 67 (366)
T 1m32_A 5 YLLLTPG-PL---T---TSRTVKEAMLFDS----CTWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLL--QGSGSY 67 (366)
T ss_dssp CEECSSS-SC---C---CCHHHHHTTCCCC----CTTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEE--ESCHHH
T ss_pred cccccCC-Cc---C---CCHHHHHHHhhhh----cCCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEE--ecChHH
Confidence 5777777 32 1 4567777654422 122221 2 788999999999995 1233568999 999999
Q ss_pred HHHHHHHHHHHhCCCCCEEEEcC-CCChh-hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 243 SLRVGTAFLERFYPGVKTVYFPT-PTWNG-HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 243 al~l~~~~l~~~~~~gd~Vlv~~-P~y~~-~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
|+.++ +..+..+||+|++++ |+|+. +...++..|++++.+|+ ++ ++.+|++.+++.+.+. .+++++++++|+
T Consensus 68 a~~~~---~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~-~~~~~v~~~~~~ 141 (366)
T 1m32_A 68 AVEAV---LGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDC-GE-VARPDVQAIDAILNAD-PTISHIAMVHSE 141 (366)
T ss_dssp HHHHH---HHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEEC-CT-TSCCCHHHHHHHHHHC-TTCCEEEEESEE
T ss_pred HHHHH---HHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeC-CC-CCCCCHHHHHHHHhcC-CCeEEEEEeccc
Confidence 99985 455666799988776 55654 66778888999999998 44 3568999999988642 346788899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVL 400 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~ 400 (583)
||||.+++ +++|+++|+++|++||+||+|......- .+ ...+..+++.|+||.++ .+.++||+++
T Consensus 142 nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~------~~----~~~~~di~~~s~~K~~~-~~~g~G~~~~- 206 (366)
T 1m32_A 142 TTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGIPM------DI----AALHIDYLISSANKCIQ-GVPGFAFVIA- 206 (366)
T ss_dssp TTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTSCC------CT----TTTTCSEEEEESSSTTC-CCSSEEEEEE-
T ss_pred CCcceecC---HHHHHHHHHHcCCEEEEECCccccCcCc------cc----cccCccEEEecCccccc-CCCceEEEEE-
Confidence 99999999 6688999999999999999998544321 11 12245789999999874 2345699999
Q ss_pred cCCchhHHHHHHHHH
Q psy14428 401 TPTSDETERIMSQLK 415 (583)
Q Consensus 401 ~p~~~~~~~li~~l~ 415 (583)
+ +++++++.
T Consensus 207 -~-----~~~~~~~~ 215 (366)
T 1m32_A 207 -R-----EQKLAACK 215 (366)
T ss_dssp -E-----HHHHTTCT
T ss_pred -C-----HHHHHhhc
Confidence 6 45665544
No 122
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.87 E-value=7.2e-21 Score=201.08 Aligned_cols=211 Identities=11% Similarity=-0.038 Sum_probs=154.5
Q ss_pred ccccCCccccCCCCCCCCChHHHHHHHHHhccC---CCCCCC----CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 165 KMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKN---LDHEYA----NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 165 ~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~---~~~~Y~----~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
.+.|..+... .+++.+.+++.+.+... ....|. ...+..++|++++++++ +++++|++ |
T Consensus 27 ~~~ld~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~--~ 92 (406)
T 3cai_A 27 WVHFDAPAGM------LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVN------ADPGGVVL--G 92 (406)
T ss_dssp CEECBGGGCC------CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEEE--E
T ss_pred eEEEeCCCcC------CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEE--e
Confidence 4555555442 24577888877776531 112242 24567899999999985 35689999 9
Q ss_pred CCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEE
Q psy14428 238 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSIL 313 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~ 313 (583)
+|+++++.++...+.....+||+|++++|+|..+...+.. .|++++.+|+ +++++.+|++.+++.+ .+++++
T Consensus 93 ~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~l---~~~~~~ 168 (406)
T 3cai_A 93 ADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEV-DIETGELPTWQWESLI---SKSTRL 168 (406)
T ss_dssp SCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECC-CTTTCCCCGGGHHHHC---CTTEEE
T ss_pred CChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEec-CcccCCcCHHHHHHHh---CCCceE
Confidence 9999999985322211145699999999999987555544 6999999998 5445678999999887 567899
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc
Q psy14428 314 FLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 314 i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR 393 (583)
+++++|+||||.+++ +++|.++|+++|++||+|++|..-... ..+.. .+..+++.|+||.+| |+
T Consensus 169 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~------~~~~~----~~~d~~~~s~~K~~g-~~-- 232 (406)
T 3cai_A 169 VAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYRL------LDIRE----TDADVVTVNAHAWGG-PP-- 232 (406)
T ss_dssp EEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTCC------CCHHH----HCCSEEEEEGGGGTS-CS--
T ss_pred EEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCCC------CCchh----cCCCEEEeehhhhcC-CC--
Confidence 999999999999998 567888999999999999999742211 11222 246788999999886 55
Q ss_pred ce-EEEEEcCCchhHHHHHHHHHH
Q psy14428 394 VG-TFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 394 iG-~lv~~~p~~~~~~~li~~l~~ 416 (583)
+| |+++ + +++++++..
T Consensus 233 ~G~~~~~--~-----~~~~~~l~~ 249 (406)
T 3cai_A 233 IGAMVFR--D-----PSVMNSFGS 249 (406)
T ss_dssp CEEEEES--C-----HHHHHTSCC
T ss_pred cCeEEEE--e-----hHHHhhcCC
Confidence 99 9998 6 467666544
No 123
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.87 E-value=4e-21 Score=205.02 Aligned_cols=291 Identities=10% Similarity=0.047 Sum_probs=180.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCC---CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLD---HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~---~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
+...+|++.+.+....|. .++.+.+++.+.++.... ..|+. ....++++++++++. +.+++|++ |+
T Consensus 42 g~~ylD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~~------~~~~~v~~--~~ 110 (429)
T 1s0a_A 42 GRRLVDGMSSWWAAIHGY--NHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMTP------QPLECVFL--AD 110 (429)
T ss_dssp SCEEEESSTTTTTCTTCB--SCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHSC------TTCCEEEE--ES
T ss_pred CCEEEEcCccHhhccCCC--CCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhCC------CCCCEEEE--eC
Confidence 345688888877544553 357888888777654211 13322 223567777776653 46789999 99
Q ss_pred CchhHHHHHHHHHHHhCC----CCCEEEEcCCCChhhHHHHhh-cC-------------CeEEEEecc-c--CCCC-CCC
Q psy14428 239 SGSGSLRVGTAFLERFYP----GVKTVYFPTPTWNGHVRFCTD-SR-------------LNVGAYRYF-D--NKTN-GLD 296 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~----~gd~Vlv~~P~y~~~~~~~~~-~G-------------~~~~~v~~~-d--~~~~-g~d 296 (583)
|+++|+.++..++..+.. |||.|++.+|+|..+...... .| ..+..+++. + .+.+ .+|
T Consensus 111 ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 190 (429)
T 1s0a_A 111 SGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERD 190 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGG
T ss_pred CHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHH
Confidence 999999987544332222 489999999999876443221 11 123444441 1 0123 478
Q ss_pred hhhHHHHHHcCCCCcEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh
Q psy14428 297 FAGMMEDIKAMPERSILFLQTSS--HNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE 373 (583)
Q Consensus 297 ~~~l~~~l~~~~~~~~~i~i~~p--~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~ 373 (583)
++.+++.+++..+++++++ ++| |||||. +.+++++++|+++|+++|+++|+||+|.+|...+. ..++.. .+.
T Consensus 191 ~~~l~~~l~~~~~~~~~vi-~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~---~~~~~~-~~~ 265 (429)
T 1s0a_A 191 MVGFARLMAAHRHEIAAVI-IEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK---LFACEH-AEI 265 (429)
T ss_dssp GHHHHHHHHHHTTTEEEEE-ECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGGG-GTC
T ss_pred HHHHHHHHHhCCCCEEEEE-EeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch---HHHhhh-cCC
Confidence 9999988854223455554 555 699996 66889999999999999999999999998865441 111111 122
Q ss_pred cCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHH-----hccccCCChHHHHHHHHHhC---Chhhhh
Q psy14428 374 VGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILI-----RGFYSNPPIHGARIVTEILS---DPKLKA 444 (583)
Q Consensus 374 ~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~-----~~~~~~~s~~~q~~~~~~l~---~~~~~~ 444 (583)
..++ .||||.++ +| +|+||+++ + +++++.+.... .....+.+.++|.++..+++ ++.+.+
T Consensus 266 ~~d~---~t~sK~l~-~G~~~iG~~~~--~-----~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~ 334 (429)
T 1s0a_A 266 APDI---LCLGKALT-GGTMTLSATLT--T-----REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ 334 (429)
T ss_dssp CCSE---EEECGGGG-TSSSCCEEEEE--C-----HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCE---EEeccccc-CCCccceEEEe--C-----HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 2333 38999998 68 99999999 6 57888887531 22345678899988877765 333333
Q ss_pred hhhhHHHHH-HHHHHHHh-hccCCCccchhhHHHHhc
Q psy14428 445 QCDETERIM-SQLKILIR-GFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 445 ~~~~~~~~~-~~l~~~~r-~~~~~~p~~g~~i~~~~l 479 (583)
+..+.+..+ +.++.+.. ..+...++.|.++|+.+.
T Consensus 335 ~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~~~~~ 371 (429)
T 1s0a_A 335 QVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETT 371 (429)
T ss_dssp HHHHHHHHHHHHHGGGGGCTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEEeeEEEEEEEC
Confidence 333333222 22222100 112223445777777654
No 124
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.87 E-value=3.8e-21 Score=202.73 Aligned_cols=284 Identities=14% Similarity=0.087 Sum_probs=182.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|++.+.+....|. .++.+.+++.+.++.. .+.| ..+..++++++++++.+..+ +++|++ |+||
T Consensus 34 ~g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~-~~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~--~~gg 102 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALGY--NHAKFNAKIKAQVDKL-LHTS--NLYYNENIAAAAKNLAKASA----LERVFF--TNSG 102 (395)
T ss_dssp TCCEEEESSHHHHTCTTCB--SCHHHHHHHHHHHTTC-SCCC--TTSBCHHHHHHHHHHHHHHT----CSEEEE--ESSH
T ss_pred CCCEEEECCCcHHhccCCC--CCHHHHHHHHHHHHhc-cccc--cccCCHHHHHHHHHHHHhcC----CCeEEE--eCCH
Confidence 3456789998876555553 3578888888777542 1112 22334445555555544333 579999 9999
Q ss_pred hhHHHHHHHHHHHhC----CCCCEEEEcCCCChhhHHHHhhcC-------------CeEEEEecccCCCCCCChhhHHHH
Q psy14428 241 SGSLRVGTAFLERFY----PGVKTVYFPTPTWNGHVRFCTDSR-------------LNVGAYRYFDNKTNGLDFAGMMED 303 (583)
Q Consensus 241 ~~al~l~~~~l~~~~----~~gd~Vlv~~P~y~~~~~~~~~~G-------------~~~~~v~~~d~~~~g~d~~~l~~~ 303 (583)
++|+..+..++.... .++|.|++.+|+|..+.......+ .++..+|.. |++.+++.
T Consensus 103 ~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~l~~~ 175 (395)
T 3nx3_A 103 TESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-------DISSVEKL 175 (395)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-------CHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-------CHHHHHHh
Confidence 999998754433320 347999999999977654333322 344445441 67777766
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEec
Q psy14428 304 IKAMPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQS 382 (583)
Q Consensus 304 l~~~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S 382 (583)
+ .++++++++.+++||+|.. ++++++++|.++|++||+++|+||+|.+|...+. .... +..+....+.|
T Consensus 176 l---~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~---~~~~----~~~~~~~d~~t 245 (395)
T 3nx3_A 176 V---NEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK---FFAY----EHAQILPDIMT 245 (395)
T ss_dssp C---CTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGG----GGGTCCCSEEE
T ss_pred c---cCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc---chhH----HhcCCCCCEEE
Confidence 6 4567777776677777765 7899999999999999999999999998865541 1111 11223334558
Q ss_pred CcccccccCccceEEEEEcCCchhHHHH-HHHHHHHHhccccCCChHHHHHHHHHhCC---hhhhhhhhh-HHHHHHHHH
Q psy14428 383 FSKNMGLYGERVGTFSVLTPTSDETERI-MSQLKILIRGFYSNPPIHGARIVTEILSD---PKLKAQCDE-TERIMSQLK 457 (583)
Q Consensus 383 ~SK~~~l~GlRiG~lv~~~p~~~~~~~l-i~~l~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~-~~~~~~~l~ 457 (583)
|||.++ .|+|+||+++ + +++ ++.+........++.++++|.++...++. +.+.++..+ .+...+.+.
T Consensus 246 ~sK~~~-~G~~~G~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~ 317 (395)
T 3nx3_A 246 SAKALG-CGLSVGAFVI--N-----QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLD 317 (395)
T ss_dssp ECGGGT-TTSCCEEEEE--C-----HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred eccccc-CCCceEEEEE--c-----hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999998 5999999999 6 567 77776654455678899999988887762 222222222 222233333
Q ss_pred HHHhh--ccCCCccchhhHHHHhcC
Q psy14428 458 ILIRG--FYSNPPIHGARIVTEILS 480 (583)
Q Consensus 458 ~~~r~--~~~~~p~~g~~i~~~~l~ 480 (583)
..... .....+..|.++++.+..
T Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (395)
T 3nx3_A 318 ELINEFDFCKKRKGLGFMQGLSLDK 342 (395)
T ss_dssp HHHHHCTTEEEEEEETTEEEEEECT
T ss_pred HHHHhCCCeEEEEeEEEEEEEEeCC
Confidence 33221 122345567887776654
No 125
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.86 E-value=3.9e-21 Score=206.76 Aligned_cols=296 Identities=15% Similarity=0.051 Sum_probs=190.7
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..+.+....|. .++.+.+++.+.+.. ...|....+..++++++++++.+..+.. .+++|++ |+||
T Consensus 62 ~G~~ylD~~~~~~~~~lGh--~~p~v~~A~~~~~~~--~~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~--~~sG 134 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGA--SHPAVAAAIADQATH--FTHTCFMVTPYEQYVQVAELLNALTPGD-HDKRTAL--FNSG 134 (453)
T ss_dssp TSCEEEESSHHHHTCTTCT--TCHHHHHHHHHHHHH--CSCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEE--ESSH
T ss_pred CCCEEEEcCCCcccCcCCC--CCHHHHHHHHHHHHh--ccccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEE--eCcH
Confidence 3456789988877666664 247888887776654 2345555566677777777776544321 2579999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCC--------------eEEEEecccC--CCCCCCh-hhH---
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRL--------------NVGAYRYFDN--KTNGLDF-AGM--- 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~--------------~~~~v~~~d~--~~~g~d~-~~l--- 300 (583)
++|++.+..++... .+++.|++.+|+|..+.......+. .+..+|+... +.+|.+. +.+
T Consensus 135 seA~~~alk~a~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 213 (453)
T 4ffc_A 135 AEAVENAIKVARLA-TGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRA 213 (453)
T ss_dssp HHHHHHHHHHHHHH-HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-cCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHH
Confidence 99999874443322 2368999999999877655443322 3444554211 1134442 222
Q ss_pred HHHHHcC-CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE
Q psy14428 301 MEDIKAM-PERSILFLQTSSHNPTGV--DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL 377 (583)
Q Consensus 301 ~~~l~~~-~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v 377 (583)
.+.+++. .++....++++|.||+|. +.+++.+++|.++|++||++||+||+|.+|...+. ...... .+.+
T Consensus 214 ~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~---~~a~~~----~~~~ 286 (453)
T 4ffc_A 214 ISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA---WFASEH----EGIV 286 (453)
T ss_dssp HHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSTHHH----HTCC
T ss_pred HHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc---cchhhh----cCCC
Confidence 2233221 345677778899999984 44888899999999999999999999999866541 112222 1233
Q ss_pred EEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC---hhhhhhhhhHH-HHH
Q psy14428 378 CLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD---PKLKAQCDETE-RIM 453 (583)
Q Consensus 378 i~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~-~~~ 453 (583)
..+.||||.++. |+|+||+++ + +++++.+........++.++++|.++...++. +.+.++..+.. ...
T Consensus 287 pdi~t~sK~~~~-G~~~G~~~~--~-----~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 358 (453)
T 4ffc_A 287 PDIVTMAKGIAG-GMPLSAVTG--R-----AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVT 358 (453)
T ss_dssp CSEEEECGGGGT-TSSCEEEEE--E-----HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cchHhhhhhhcC-CcCeEEEEE--C-----HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 345689999985 999999998 6 57888887666666788899999988888762 23333332222 223
Q ss_pred HHHHHHHhh--ccCCCccchhhHHHHhc
Q psy14428 454 SQLKILIRG--FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 454 ~~l~~~~r~--~~~~~p~~g~~i~~~~l 479 (583)
+.++.+... .....+..|.++++.+.
T Consensus 359 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 386 (453)
T 4ffc_A 359 SRLSALAEEVDIIGEVRGRGAMLAIEIV 386 (453)
T ss_dssp HHHHHHHHHCSSEEEEEEETTEEEEEEB
T ss_pred HHHHHHHhhCCCeEEEEeeceEEEEEEe
Confidence 333333222 22344566888877664
No 126
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.86 E-value=4.8e-21 Score=197.80 Aligned_cols=194 Identities=15% Similarity=0.066 Sum_probs=142.9
Q ss_pred CChHHHHHHHHHhccCCCCCCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYA-NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKT 260 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~ 260 (583)
+++.+.+++.+.... +.|+ ...+..++|++++++++. +.++++|++ |+|+++|+.++ +..+.+ |+
T Consensus 11 ~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~--t~g~t~a~~~~---~~~~~~--d~ 76 (353)
T 2yrr_A 11 IPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFDP----GEGALVAAL--AGSGSLGMEAG---LANLDR--GP 76 (353)
T ss_dssp CCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHCC----CTTCEEEEE--SSCHHHHHHHH---HHTCSC--CC
T ss_pred CCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhCC----CCCCceEEE--cCCcHHHHHHH---HHHhcC--Cc
Confidence 456777776554432 2232 235678999999999853 345788999 99999999985 444544 89
Q ss_pred EEEcCCCChhh--HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 261 VYFPTPTWNGH--VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 261 Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
|++++|+|..+ ...++..|++++.+|+ ++ ++.+|++.+++.+... +++++++++||||||.+++ +++|.++
T Consensus 77 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~---~~~i~~l 149 (353)
T 2yrr_A 77 VLVLVNGAFSQRVAEMAALHGLDPEVLDF-PP-GEPVDPEAVARALKRR--RYRMVALVHGETSTGVLNP---AEAIGAL 149 (353)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCCEEEEEC-CT-TSCCCHHHHHHHHHHS--CCSEEEEESEETTTTEECC---HHHHHHH
T ss_pred EEEEcCCCchHHHHHHHHHcCCceEEEeC-CC-CCCCCHHHHHHHHHhC--CCCEEEEEccCCCcceecC---HHHHHHH
Confidence 99999998875 4566778999999998 54 3568999999988532 5678899999999999998 5577889
Q ss_pred HHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc-cccCccceEEEEEcCCchhHHHHHHHHH
Q psy14428 339 VKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETERIMSQLK 415 (583)
Q Consensus 339 a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~li~~l~ 415 (583)
|+++|++||+||+|..... + .++..+ +..+++.|++|.+ +.+| +||+++ + +++++++.
T Consensus 150 ~~~~~~~li~D~a~~~~~~-----~-~~~~~~----~~d~~~~s~~K~~~~~~g--~G~~~~--~-----~~~~~~l~ 208 (353)
T 2yrr_A 150 AKEAGALFFLDAVTTLGML-----P-FSMRAM----GVDYAFTGSQKCLSAPPG--LAPIAA--S-----LEARKAFT 208 (353)
T ss_dssp HHHHTCEEEEECTTTTTTS-----C-CCHHHH----TCSEEECCTTSTTCCCSS--CEEEEE--C-----HHHHHHCC
T ss_pred HHHcCCeEEEEcCcccccc-----c-cccccc----CceEEEecCcccccCCCc--eEEEEE--C-----HHHHHHhc
Confidence 9999999999999953221 1 123222 3457888999965 5566 699999 6 46666553
No 127
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.86 E-value=1.1e-20 Score=197.70 Aligned_cols=189 Identities=12% Similarity=0.046 Sum_probs=142.6
Q ss_pred CChHHHHHHHHHhccC---CCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH-
Q psy14428 182 VLPSVKEAERRIYEKN---LDHEYAN----IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER- 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~---~~~~Y~~----~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~- 253 (583)
+++.+.+++.+.+.+. ....|.. ..+..++|++++++++ +++++|++ |+|+++|+.++...+..
T Consensus 12 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~--~~g~t~a~~~~~~~l~~~ 83 (382)
T 4eb5_A 12 VDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN------GGGGTVVF--TSGATEANNLAIIGYAMR 83 (382)
T ss_dssp CCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CTTEEEEE--ESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhC------CCCCeEEE--cCchHHHHHHHHHHHHhh
Confidence 5688888887776531 0112432 2467889999999985 34679999 99999999986433320
Q ss_pred hCCCCCEEEEcCCCChhhHHHHh---hcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q psy14428 254 FYPGVKTVYFPTPTWNGHVRFCT---DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330 (583)
Q Consensus 254 ~~~~gd~Vlv~~P~y~~~~~~~~---~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~ 330 (583)
+..+||+|++++|+|+.+...+. ..|++++.+|+ ++ ++.+|++.+++.+ .++++++++++|+||||.+++
T Consensus 84 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i---~~~~~~v~~~~~~nptG~~~~-- 156 (382)
T 4eb5_A 84 NARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPV-GK-YGEVDVSFIDQKL---RDDTILVSVQHANNEIGTIQP-- 156 (382)
T ss_dssp HGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECB-CT-TSCBCHHHHHHHC---CTTEEEEECCSBCTTTCBBCC--
T ss_pred ccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEecc-CC-CCccCHHHHHHHh---cCCCeEEEEeccCCCccccCC--
Confidence 11569999999999998876664 36999999998 54 4668999998887 457899999999999999998
Q ss_pred HHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 331 QWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 331 ~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+++|+++|+++|++ |+||+|.. +. .+..+.. .+..+++.|+||.+|.+| +||+++
T Consensus 157 -l~~i~~l~~~~~~~-i~D~a~~~---g~---~~~~~~~----~~~di~~~s~sK~~g~~g--~G~~~~ 211 (382)
T 4eb5_A 157 -VEEISEVLAGKAAL-HIDATASV---GQ---IEVDVEK----IGADMLTISSNDIYGPKG--VGALWI 211 (382)
T ss_dssp -HHHHHHHHTTSSEE-EEECTTTB---TT---BCCCHHH----HTCSEEEEETGGGTCCSS--CEEEEE
T ss_pred -HHHHHHHHHHCCCE-EEEcchhc---CC---cccCccc----cCCCEEEeehHHhcCCCc--eEEEEE
Confidence 56789999999999 99999983 21 1112222 245689999999988666 799998
No 128
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.86 E-value=9.3e-21 Score=200.28 Aligned_cols=262 Identities=15% Similarity=0.054 Sum_probs=184.4
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG 242 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~ 242 (583)
...+||+.|.+. .++.+.+++.+.... ..|.+..+..+||++++++++.. ++++ +++|++
T Consensus 30 ~~~id~~~~~~~-------~~~~v~~a~~~~~~~---~~y~~~~~~~~l~~~la~~~~~~--------~~v~--~~~Gt~ 89 (399)
T 2oga_A 30 VPFLDLKAAYEE-------LRAETDAAIARVLDS---GRYLLGPELEGFEAEFAAYCETD--------HAVG--VNSGMD 89 (399)
T ss_dssp BCSCCHHHHHHH-------THHHHHHHHHHHHHH---TCCSSSHHHHHHHHHHHHHTTSS--------EEEE--ESCHHH
T ss_pred CcccccCcCCCC-------CCHHHHHHHHHHHhc---CCCCCchhHHHHHHHHHHHHCCC--------eEEE--ecCHHH
Confidence 356788888874 226788887777654 25777788999999999998532 4556 677789
Q ss_pred HHHHHHHHHHHh-CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 243 SLRVGTAFLERF-YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 243 al~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
|+.++ +..+ ..+||+|++++|+|..+...++..|++++.+|+ +++++.+|++.+++.+ .+++++++ |+|
T Consensus 90 a~~~~---l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i---~~~~~~v~---~~n 159 (399)
T 2oga_A 90 ALQLA---LRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEP-HEDHPTLDPLLVEKAI---TPRTRALL---PVH 159 (399)
T ss_dssp HHHHH---HHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECB-CSSSSSBCHHHHHHHC---CTTEEEEC---CBC
T ss_pred HHHHH---HHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEec-CCCCCCcCHHHHHHhc---CCCCeEEE---EeC
Confidence 99885 4555 677999999999999999999999999999998 5545789999998887 45677665 578
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCC-CCCCCCchHHHHHHHHhcCcEEEEecC--cccccccCccceEEE
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLT-SGDFDKDAFSLRYFAKEVGQLCLAQSF--SKNMGLYGERVGTFS 398 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~-~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~l~GlRiG~lv 398 (583)
|||.+.+ +++|.++|++++++||+||+|..+. +++ .. +.. . ..+++.|| ||.++.+| |+||++
T Consensus 160 ~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~--~~---~~~----~-~di~~~S~~~sK~~~~~G-~~g~~~ 225 (399)
T 2oga_A 160 LYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYRG--RR---IGA----G-SSVAAFSFYPGKNLGCFG-DGGAVV 225 (399)
T ss_dssp GGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETT--EE---TTC----T-TCEEEEECCTTSSSCCSS-CCEEEE
T ss_pred CcCCccC---HHHHHHHHHHcCCEEEEECcccccCccCC--ee---ccc----c-cCEEEEeCCCCccCCcCC-ceEEEE
Confidence 9999876 6777889999999999999998764 332 11 111 1 24788888 89999779 999999
Q ss_pred EEcCCchhHHHHHHHHHHHHhcc------------ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh--cc
Q psy14428 399 VLTPTSDETERIMSQLKILIRGF------------YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG--FY 464 (583)
Q Consensus 399 ~~~p~~~~~~~li~~l~~~~~~~------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~--~~ 464 (583)
+ ++ +++++++....... ....+.+.+.++...++. ++...++.++..+.+.+.++. .+
T Consensus 226 ~--~~----~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~l~~~L~~~~g~ 297 (399)
T 2oga_A 226 T--GD----PELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH--LDSWNGRRSALAAEYLSGLAGLPGI 297 (399)
T ss_dssp E--SC----HHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHTTTCTTC
T ss_pred e--CC----HHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhccCCCc
Confidence 8 65 46888777654321 124567777666666643 222333333333334444433 22
Q ss_pred C--CCccchhhHHH
Q psy14428 465 S--NPPIHGARIVT 476 (583)
Q Consensus 465 ~--~~p~~g~~i~~ 476 (583)
. ..|..+.++|.
T Consensus 298 ~~~~~~~~~~~~~~ 311 (399)
T 2oga_A 298 GLPVTAPDTDPVWH 311 (399)
T ss_dssp BCCCCCTTEECCCS
T ss_pred cccCCCCCCcceeE
Confidence 2 23555666653
No 129
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.86 E-value=1.9e-20 Score=201.75 Aligned_cols=298 Identities=12% Similarity=0.040 Sum_probs=189.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|++.+.+....|. .++.+.+++.+.+.+. ...|....+..++++++++++.+..+ ...++|++ |+||
T Consensus 48 ~g~~ylD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~gg 120 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVNVGY--GRKDFAEAARRQMEEL-PFYNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFY--TNSG 120 (459)
T ss_dssp TCCEEEETTHHHHTCTTCB--CCHHHHHHHHHHHHHC-SCCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEE--ESSH
T ss_pred CCCEEEECCCchhcccCCC--CCHHHHHHHHHHHHhc-cccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCch
Confidence 3456799998877666664 3578888877776542 23455556667788888888876543 45679999 9999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhhcCC-------------eEEEEecc---cCCCCCCC---
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTDSRL-------------NVGAYRYF---DNKTNGLD--- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~---d~~~~g~d--- 296 (583)
++|++.+..++.... ++++.|++.+|+|..+.......+. .+..++.. ...++ +|
T Consensus 121 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~ 199 (459)
T 4a6r_A 121 SESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDE 199 (459)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHH
Confidence 999998754443221 3479999999999987655544322 23333320 00111 34
Q ss_pred -----hhhHHHHHHcCCCCcEEEEeCCCCCCC-CC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 297 -----FAGMMEDIKAMPERSILFLQTSSHNPT-GV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 297 -----~~~l~~~l~~~~~~~~~i~i~~p~NPT-G~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
++.+++.+.+..+.....++++|+|++ |. +++++.+++|.++|++||+++|+||+|.+|...+. ......
T Consensus 200 ~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~---~~~~~~ 276 (459)
T 4a6r_A 200 FGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGE---WFGHQH 276 (459)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc---cchHhh
Confidence 677777775433233344444555544 44 55999999999999999999999999999876551 222222
Q ss_pred HHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHH---HHHhccccCCChHHHHHHHHHhCC---hhhh
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLK---ILIRGFYSNPPIHGARIVTEILSD---PKLK 443 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~---~~~~~~~~~~s~~~q~~~~~~l~~---~~~~ 443 (583)
+ +.... +.+|||.++..|+|+||+++ + +++++.+. .......++.++++|.++.+.++. +.+.
T Consensus 277 ~-~~~pd---i~t~sK~l~gg~~~lg~v~~--~-----~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 345 (459)
T 4a6r_A 277 F-GFQPD---LFTAAKGLSSGYLPIGAVFV--G-----KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIV 345 (459)
T ss_dssp H-TCCCS---EEEECGGGGTTSSCCEEEEE--C-----HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHH
T ss_pred c-CCCCC---eeehhhhhcCCCCCccceee--C-----HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHH
Confidence 2 22233 33789999844499999999 6 68888887 334444668889999998888862 2332
Q ss_pred hhhh--hHHHHHHHHHHHHhh--ccCCCccchhhHHHHhcC
Q psy14428 444 AQCD--ETERIMSQLKILIRG--FYSNPPIHGARIVTEILS 480 (583)
Q Consensus 444 ~~~~--~~~~~~~~l~~~~r~--~~~~~p~~g~~i~~~~l~ 480 (583)
++.. ......+.+.+.+.. .....+..|.++++.+..
T Consensus 346 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~ 386 (459)
T 4a6r_A 346 QRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVK 386 (459)
T ss_dssp HHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEec
Confidence 2222 222333333222221 123445667777766654
No 130
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.86 E-value=6.4e-21 Score=203.59 Aligned_cols=292 Identities=13% Similarity=0.044 Sum_probs=178.4
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...+|+..+.+....|. .++.+.+++.+.+.... . + ...+..+++.++++.+.+..+ +++++|++ |+|++
T Consensus 42 g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~-~-~-~~~~~~~~~~~l~~~la~~~~--~~~~~v~~--~~gg~ 112 (433)
T 1zod_A 42 GRAILDFTSGQMSAVLGH--CHPEIVSVIGEYAGKLD-H-L-FSEMLSRPVVDLATRLANITP--PGLDRALL--LSTGA 112 (433)
T ss_dssp CCEEEETTHHHHTCTTCB--TCHHHHHHHHHHHHHCC-C-C-CTTCCCHHHHHHHHHHHHHSC--TTCCEEEE--ESCHH
T ss_pred CCEEEEcccchhccccCC--CCHHHHHHHHHHHHhCc-c-c-ccccCCHHHHHHHHHHHHhCC--CCcCEEEE--eCchH
Confidence 345678877776544452 35788888877765421 1 1 122223444444444444333 34689999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh--------------cCCeEEEEecccCCCCC--------CChhh
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD--------------SRLNVGAYRYFDNKTNG--------LDFAG 299 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~--------------~G~~~~~v~~~d~~~~g--------~d~~~ 299 (583)
+|+..+..++... +++|.|++.+|+|..+...... .|++.+++|..-...++ +|++.
T Consensus 113 ea~~~a~~~~~~~-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~ 191 (433)
T 1zod_A 113 ESNEAAIRMAKLV-TGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDY 191 (433)
T ss_dssp HHHHHHHHHHHHH-HTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHH
T ss_pred HHHHHHHHHHHHh-hCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHH
Confidence 9999874433222 2368999999999775443221 13333333320000112 35888
Q ss_pred HHHHHHcCC-CCcEEEEeCCC-CCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCc
Q psy14428 300 MMEDIKAMP-ERSILFLQTSS-HNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQ 376 (583)
Q Consensus 300 l~~~l~~~~-~~~~~i~i~~p-~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 376 (583)
+++.+++.. +++++++ ++| |||||. +++++++++|+++|++||++||+||+|.+|.+.+. ...+..+ +....
T Consensus 192 le~~l~~~~~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~---~~~~~~~-~~~~d 266 (433)
T 1zod_A 192 AFDLIDRQSSGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT---MFACQRD-GVTPD 266 (433)
T ss_dssp HHHHHHHHCCSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSTHHHH-TCCCS
T ss_pred HHHHHHhcCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch---HhHHhhc-CCCCC
Confidence 888885322 3455555 456 588996 67899999999999999999999999999875541 1122221 22223
Q ss_pred EEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhc--cccCCChHHHHHHHHHhC---ChhhhhhhhhHHH
Q psy14428 377 LCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRG--FYSNPPIHGARIVTEILS---DPKLKAQCDETER 451 (583)
Q Consensus 377 vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~ 451 (583)
+.||||.++ .|+|+||+++ + +++++.+...... ...+.+.++|.++...++ ++.+.++..+.+.
T Consensus 267 ---i~s~sK~~~-~G~~ig~~~~--~-----~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~ 335 (433)
T 1zod_A 267 ---ILTLSKTLG-AGLPLAAIVT--S-----AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGD 335 (433)
T ss_dssp ---EEEECHHHH-TTSSCEEEEE--C-----HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred ---EEEeccccc-CCCCeeEEEE--h-----HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 449999999 4999999999 7 5788888763222 456778999988777764 2334444433333
Q ss_pred -HHHHHHHHHh--hccCCCccchhhHHHHhc
Q psy14428 452 -IMSQLKILIR--GFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 452 -~~~~l~~~~r--~~~~~~p~~g~~i~~~~l 479 (583)
+.+.++.+.. ......+..|.++|+.+.
T Consensus 336 ~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~ 366 (433)
T 1zod_A 336 RLRRGLLDLMERFDCIGDVRGRGLLLGVEIV 366 (433)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHhCCCeEEEEEEEEEEEEEEe
Confidence 2333333321 112234556888887664
No 131
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.85 E-value=1.6e-20 Score=201.98 Aligned_cols=283 Identities=13% Similarity=0.000 Sum_probs=175.0
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...+|++.+.+....|. .++.+.+++.+.+... ..| .+..++++++++++.+..+ .+++|++ |+|++
T Consensus 56 g~~~iD~~~~~~~~~lg~--~~~~v~~a~~~~~~~~--~~~---~~~~~~~~~la~~l~~~~~---~~~~v~~--~~gg~ 123 (453)
T 2cy8_A 56 GNVYLDFFGGHGALVLGH--GHPRVNAAIAEALSHG--VQY---AASHPLEVRWAERIVAAFP---SIRKLRF--TGSGT 123 (453)
T ss_dssp CCEEEESCTTTTSCTTCB--TCHHHHHHHHHHHTTT--CSS---CSSCHHHHHHHHHHHHHCT---TCSEEEE--ESCHH
T ss_pred CCEEEECcccHhhcccCC--CCHHHHHHHHHHHHhC--CCC---CCCCHHHHHHHHHHHhhCC---CCCEEEE--eCCHH
Confidence 345689998887655553 4578888888877542 123 2467899999999987653 5789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-----------cCCe------EEEEecccCCCCCCChhhHHHHH
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-----------SRLN------VGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-----------~G~~------~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
+|+.++..+.+.+.+ ++.|++.+|+|..+...+.. .|+. ++.++. .|++.+++.+
T Consensus 124 eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l 195 (453)
T 2cy8_A 124 ETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVF 195 (453)
T ss_dssp HHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHH
Confidence 999987544333555 57888999999876543221 1321 233332 2788998888
Q ss_pred HcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecC
Q psy14428 305 KAMPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
++..++++++++...+||||.+ .+++++++|.++|++||++||+||+|.+| ..+ .......+ +.... +.||
T Consensus 196 ~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g---~~~~~~~~-~~~~d---i~s~ 267 (453)
T 2cy8_A 196 ANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVG---NHGMQALL-DVQPD---LTCL 267 (453)
T ss_dssp HHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTC---TTHHHHHH-TCCCS---EEEE
T ss_pred HhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccC---chhhhHHh-CCCCc---EEEE
Confidence 5422345555544445779975 57999999999999999999999999988 433 12222221 22223 3499
Q ss_pred cccccccCccceEEEEEcCCchhHHHHHHHHHH---H--HhccccCCChHHHHHHHHHhCC---hhhhhhhhhHHH-HHH
Q psy14428 384 SKNMGLYGERVGTFSVLTPTSDETERIMSQLKI---L--IRGFYSNPPIHGARIVTEILSD---PKLKAQCDETER-IMS 454 (583)
Q Consensus 384 SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~---~--~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~-~~~ 454 (583)
||.++ +|+|+||+++ + +++++.+.. . .....++.++++|.++...++. +.+.++..+... +.+
T Consensus 268 sK~l~-~G~~~G~v~~--~-----~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~ 339 (453)
T 2cy8_A 268 AKASA-GGLPGGILGG--R-----EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFARE 339 (453)
T ss_dssp EGGGG-TTSSCEEEEE--C-----HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred Chhhh-CCcceEEEec--h-----HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99999 6999999999 7 577777654 1 1223456788888887776654 333333333332 223
Q ss_pred HHHHHHhh-cc-CCCccchhhHHHHhcC
Q psy14428 455 QLKILIRG-FY-SNPPIHGARIVTEILS 480 (583)
Q Consensus 455 ~l~~~~r~-~~-~~~p~~g~~i~~~~l~ 480 (583)
.++.+... .+ ...+..|.++|+.+..
T Consensus 340 ~L~~~~~~~~~~~~~~~~g~~~~i~~~~ 367 (453)
T 2cy8_A 340 AMNHLFARKGLNWLAYGRFSGFHLMPGL 367 (453)
T ss_dssp HHHHHHHHTTCCEEEECCTTEEEEEETS
T ss_pred HHHHHHhhCCCcEEEEEeeeEEEEEEec
Confidence 33333211 12 2245677888876653
No 132
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.85 E-value=1.3e-20 Score=201.03 Aligned_cols=202 Identities=15% Similarity=0.068 Sum_probs=133.9
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC---------CCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI---------GGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~---------~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
+.+.|..+... .+++.+.+++.+.... ...|+.. ....++|++++++++ +++++|++
T Consensus 18 ~~~~Ld~~~~~------~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~v~~ 83 (432)
T 3a9z_A 18 RKVYMDYNATT------PLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMIG------GKPQDIIF 83 (432)
T ss_dssp CCEECBTTTCC------CCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHHT------CCGGGEEE
T ss_pred CcEEeeCCccC------CCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHcC------CCcCeEEE
Confidence 44556555442 2567888888776643 2233321 123699999999985 35789999
Q ss_pred EecCCchhHHHHHHHHHHH-hC----CCCCEEEEcCCCChhh-----------------HHHHhhcCCeEEEEecccCCC
Q psy14428 235 VQGISGSGSLRVGTAFLER-FY----PGVKTVYFPTPTWNGH-----------------VRFCTDSRLNVGAYRYFDNKT 292 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~-~~----~~gd~Vlv~~P~y~~~-----------------~~~~~~~G~~~~~v~~~d~~~ 292 (583)
|+|+++++.++...+.. +. .+||+|++++|+|..+ ....+..|++++.+|+ ++++
T Consensus 84 --~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~-~~~~ 160 (432)
T 3a9z_A 84 --TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPV-SKVN 160 (432)
T ss_dssp --ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECC-CTTT
T ss_pred --eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEec-Cccc
Confidence 99999999986433310 11 3599999999999875 3444557999999998 5434
Q ss_pred CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC----------eEEEEeccCCCCCCCCCCC
Q psy14428 293 NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRH----------LYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 293 ~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~----------i~iI~De~Y~~l~~~~~~~ 362 (583)
+.+|++.+++.+ .++++++++++||||||.+++.+ +|.++|++++ ++||+||+|......
T Consensus 161 ~~~d~~~l~~~i---~~~~~~v~~~~~~nptG~~~~~~---~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~---- 230 (432)
T 3a9z_A 161 GQVEVEDILAAV---RPTTCLVTIMLANNETGVIMPIS---EISRRIKALNQIRAASGLPRVLVHTDAAQALGKRR---- 230 (432)
T ss_dssp SSCCHHHHHHTC---CTTEEEEECCSBCTTTCBBCCHH---HHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSC----
T ss_pred CCcCHHHHHHhc---cCCceEEEEECcccCcccccCHH---HHHHHHHhcCcccccccCCceEEEEEchhhhCCcc----
Confidence 568999998876 56789999999999999999965 5678888988 999999999765321
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCC
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPT 403 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~ 403 (583)
..+..+ ... +++.|+||.+| .|+||+++ ++
T Consensus 231 --~~~~~~---~~d-~~~~s~~K~~g---~~~G~~~~--~~ 260 (432)
T 3a9z_A 231 --VDVEDL---GVD-FLTIVGHKFYG---PRIGALYV--RG 260 (432)
T ss_dssp --CCHHHH---CCS-EEEEEGGGTTC---CSCEEEEE--TT
T ss_pred --cChhhc---CCC-EEEEehhHhcC---CcceEEEE--cc
Confidence 122221 233 45899999764 67999999 64
No 133
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.85 E-value=3.1e-20 Score=200.11 Aligned_cols=298 Identities=13% Similarity=0.063 Sum_probs=190.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|++.|.+....|. .++.+.+++.+.+.+. ...|....+..++++++++++.+.. ....++|++ |+||
T Consensus 49 ~G~~~lD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~--~~gG 121 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGY--GRQKIADAIATQAKNL-AYYHAYVGHGTEASITLAKMIIDRA--PKGMSRVYF--GLSG 121 (460)
T ss_dssp TCCEEEETTHHHHTCTTCB--CCHHHHHHHHHHHHHH-SCCCCCTTCCCHHHHHHHHHHHHHS--CTTEEEEEE--ESSH
T ss_pred CCCEEEECCcchhhccCCC--CCHHHHHHHHHHHHhc-cccccccccCCHHHHHHHHHHHhhC--CCCcCEEEE--eCch
Confidence 4556799998876555664 3477888877666542 2345555666677888888776543 245679999 9999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhhcCC-------------eEEEEecc---cCCCCCCC---
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTDSRL-------------NVGAYRYF---DNKTNGLD--- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~---d~~~~g~d--- 296 (583)
++|++.+..++.... ++++.|++.+|+|..+.......+. .+..++.. ..++.+.+
T Consensus 122 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 201 (460)
T 3gju_A 122 SDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQ 201 (460)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhH
Confidence 999999754443221 4479999999999877654443321 23444431 11222444
Q ss_pred -----hhhHHHHHHcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 297 -----FAGMMEDIKAMP-ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 297 -----~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
++.+++.+.+.. ++++++++..++|++|. +++++.+++|.++|++||+++|+||+|.+|...+. ......
T Consensus 202 ~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~---~~~~~~ 278 (460)
T 3gju_A 202 FSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT---MFGSDH 278 (460)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc---cchHhh
Confidence 477777775322 45566666666777776 78899999999999999999999999999866541 222222
Q ss_pred HHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHhCChh
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEILSDPK 441 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l~~~~ 441 (583)
+ +.... +.+|||.++ .| +|+||+++ + +++++.+... .....++.++++|.++.+.++.-.
T Consensus 279 ~-~~~pd---i~t~sK~l~-gG~~~lg~v~~--~-----~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 346 (460)
T 3gju_A 279 Y-GIKPD---LITIAKGLT-SAYAPLSGVIV--A-----DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELID 346 (460)
T ss_dssp H-TCCCS---EEEECGGGT-TTSSCCEEEEE--E-----HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred c-CCCCC---eeeeehhhc-CCCCCeEEEEE--C-----HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 2 22223 447899997 56 89999999 6 5888888642 334466789999999888886211
Q ss_pred hhhhhhhHHHHHHHHH----HHHhh--ccCCCccchhhHHHHhcC
Q psy14428 442 LKAQCDETERIMSQLK----ILIRG--FYSNPPIHGARIVTEILS 480 (583)
Q Consensus 442 ~~~~~~~~~~~~~~l~----~~~r~--~~~~~p~~g~~i~~~~l~ 480 (583)
-+..+++.++..+.++ ..+.. .....+..|.++++.+..
T Consensus 347 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~ 391 (460)
T 3gju_A 347 EMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFVA 391 (460)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECS
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEEEcc
Confidence 1222233333333332 33221 122345567777776654
No 134
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.85 E-value=2.8e-20 Score=194.66 Aligned_cols=197 Identities=14% Similarity=0.039 Sum_probs=143.0
Q ss_pred CChHHHHHHHHHhccCCCCCCCCC--CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC---C
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANI--GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY---P 256 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~--~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~---~ 256 (583)
+++.+.+++.+... ..|.+. ....++|+++++++.... .+++++|++ |+|+++++.++ +..+. .
T Consensus 16 ~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~--~~g~t~al~~~---~~~~~~~~~ 84 (385)
T 2bkw_A 16 LSGAVQKALDVPSL----GHTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVL--AGSGTLGWDIF---ASNFILSKA 84 (385)
T ss_dssp CCHHHHHTTSCCCC----CTTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEE--ESCTTHHHHHH---HHHHSCTTC
T ss_pred chHHHHHHHhcccc----ccCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEE--cCchHHHHHHH---HHHHhccCC
Confidence 45666666543221 123222 246788999999997643 356789999 99999999985 34454 6
Q ss_pred CCCEEEEc-CCCChhhH-HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q psy14428 257 GVKTVYFP-TPTWNGHV-RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQ 334 (583)
Q Consensus 257 ~gd~Vlv~-~P~y~~~~-~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~ 334 (583)
+||+|+++ .|+|..+. ..++..|++++.+++. ++++.+|++.+++.+.. .+++++++++|+||||.+++ +++
T Consensus 85 ~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~---l~~ 158 (385)
T 2bkw_A 85 PNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQ--NSYGAVTVTHVDTSTAVLSD---LKA 158 (385)
T ss_dssp SCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHH--SCCSEEEEESEETTTTEECC---HHH
T ss_pred CCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhc--CCCCEEEEEccCCCcCeEcC---HHH
Confidence 79999887 56777663 6778889999999872 23466899999998853 25778899999999999998 557
Q ss_pred HHHHHHhc--CeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccc-cccCccceEEEEEcCCchhHHHHH
Q psy14428 335 LAVVVKQR--HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNM-GLYGERVGTFSVLTPTSDETERIM 411 (583)
Q Consensus 335 l~~~a~~~--~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~lv~~~p~~~~~~~li 411 (583)
|+++|+++ |++||+||+|...... . .+ ...+..+++.|+||.+ |.+|+ ||+++ + ++++
T Consensus 159 i~~~~~~~~~~~~li~D~a~~~~~~~-----~-~~----~~~~~d~~~~s~~K~~~~~~G~--G~~~~--~-----~~~~ 219 (385)
T 2bkw_A 159 ISQAIKQTSPETFFVVDAVCSIGCEE-----F-EF----DEWGVDFALTASQKAIGAPAGL--SISLC--S-----SRFM 219 (385)
T ss_dssp HHHHHHHHCTTSEEEEECTTTTTTSC-----C-CT----TTTTCSEEEEESSSTTCCCSCE--EEEEE--C-----HHHH
T ss_pred HHHHHHhhCCCCEEEEECccccCCcc-----c-cc----cccCceEEEecCccccccCCcc--eEEEE--c-----HHHH
Confidence 88999999 9999999999743211 0 11 1224568899999966 46775 99999 6 4565
Q ss_pred H-HH
Q psy14428 412 S-QL 414 (583)
Q Consensus 412 ~-~l 414 (583)
+ ++
T Consensus 220 ~~~l 223 (385)
T 2bkw_A 220 DYAL 223 (385)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5 44
No 135
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.85 E-value=2.2e-20 Score=198.99 Aligned_cols=205 Identities=17% Similarity=0.082 Sum_probs=160.5
Q ss_pred ccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCC-CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHH
Q psy14428 167 NLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYAN-IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLR 245 (583)
Q Consensus 167 ~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~-~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~ 245 (583)
+|+.++++.. +++.+.+++.+.+... .|++ ..|..+||++++++++. ++|++ |+|+++++.
T Consensus 20 ~l~~~~p~~~-----~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~ 81 (424)
T 2po3_A 20 PLLVGRPNRI-----DRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAGV--------RHAVA--TCNATAGLQ 81 (424)
T ss_dssp CEETTCCCCC-----CHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHTS--------SEEEE--ESCHHHHHH
T ss_pred cccccCCCCC-----ChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHH
Confidence 5777777522 3467888877776542 4877 78999999999999963 48999 999999999
Q ss_pred HHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCC
Q psy14428 246 VGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGV 325 (583)
Q Consensus 246 l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~ 325 (583)
++. ..+. +||+|++++|+|..+...++..|++++.+++ +++++.+|++.+++.+ .+++++++++ ||||.
T Consensus 82 ~~l---~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i---~~~~~~v~~~---~~tG~ 150 (424)
T 2po3_A 82 LLA---HAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADI-DPDTGNLDPDQVAAAV---TPRTSAVVGV---HLWGR 150 (424)
T ss_dssp HHH---HHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTSSBCHHHHGGGC---CTTEEEEEEE---CGGGC
T ss_pred HHH---HHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHhh---CcCCcEEEEE---CCCCC
Confidence 863 3444 4899999999999999999999999999999 5555778999888776 4567888775 48998
Q ss_pred CCCHHHHHHHHHHHHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCc
Q psy14428 326 DLSEDQWRQLAVVVKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTS 404 (583)
Q Consensus 326 ~~s~~~~~~l~~~a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~ 404 (583)
.. ++++|+++|++++++||+||+|. ++.+++ . ++.. ... +++.||||..+++|+|+||+++ ++
T Consensus 151 ~~---~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~---~~~~----~~d-i~~~S~sk~K~l~~~~~G~~v~--~~- 214 (424)
T 2po3_A 151 PC---AADQLRKVADEHGLRLYFDAAHALGCAVDG--R---PAGS----LGD-AEVFSFHATKAVNAFEGGAVVT--DD- 214 (424)
T ss_dssp CC---CHHHHHHHHHHTTCEEEEECTTCTTCEETT--E---ETTS----SSS-EEEEECCTTSSSCCSSCEEEEE--SC-
T ss_pred cC---CHHHHHHHHHHcCCEEEEECccccCCeECC--e---eccc----ccC-EEEEeCCCCCCccCCCCeEEEe--CC-
Confidence 64 67788899999999999999999 576654 1 1111 123 8999999777778899999999 64
Q ss_pred hhHHHHHHHHHHHHh
Q psy14428 405 DETERIMSQLKILIR 419 (583)
Q Consensus 405 ~~~~~li~~l~~~~~ 419 (583)
+++++++.....
T Consensus 215 ---~~l~~~l~~~~~ 226 (424)
T 2po3_A 215 ---ADLAARIRALHN 226 (424)
T ss_dssp ---HHHHHHHHHHHB
T ss_pred ---HHHHHHHHHHHh
Confidence 368888877654
No 136
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.85 E-value=4.5e-21 Score=198.54 Aligned_cols=279 Identities=11% Similarity=0.036 Sum_probs=181.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.++..|+|+.+.+. .+++.+.+++.+.... ....|++.....++++.++++++ .+++|++ |+|+
T Consensus 5 ~~~~~id~~~~~~~------~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g-------~~~~v~~--~~~g 68 (356)
T 1v72_A 5 SRPPALGFSSDNIA------GASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIFE-------RDVEVFL--VPTG 68 (356)
T ss_dssp -CCCCCBCSCGGGC------CCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHHT-------SCCEEEE--ESCH
T ss_pred CCCceEeeccCCcc------CCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHhC-------CCCcEEE--eCCc
Confidence 35678899887542 1457888888776422 13456555556677777777763 1356899 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH--Hhhc--CCeEEEEecccCCCCCCChhhHHH-HHHcC----CCCc
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF--CTDS--RLNVGAYRYFDNKTNGLDFAGMME-DIKAM----PERS 311 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~--~~~~--G~~~~~v~~~d~~~~g~d~~~l~~-~l~~~----~~~~ 311 (583)
++|+.++ +..+..+||.|++++|+|..+... +... |++++.+|. + ++++|++.+++ .+... ..++
T Consensus 69 t~a~~~a---l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~~i~~~~~~~~~~~ 142 (356)
T 1v72_A 69 TAANALC---LSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDG-P--AAKLDIVRLRERTREKVGDVHTTQP 142 (356)
T ss_dssp HHHHHHH---HHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCC-G--GGCCCHHHHHHHTTSSTTCTTSCEE
T ss_pred cHHHHHH---HHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecC-C--CCeEcHHHHHHHhhhcchhhccCCc
Confidence 9999885 455667799999999998776555 6666 999999987 4 26889999988 77431 1257
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC--CCCCCchHHHHHHHHhcCcEEEEecCcccccc
Q psy14428 312 ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS--GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGL 389 (583)
Q Consensus 312 ~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~--~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l 389 (583)
+++++++||| ||.+++.+++++|+++|++||++||+|++|..+.. .+. ....+ .+ +....++ +.|+||.
T Consensus 143 ~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~-~~-~~~~d~~-~~s~sK~--- 213 (356)
T 1v72_A 143 ACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGC--SPAEM-TW-KAGVDAL-SFGATKN--- 213 (356)
T ss_dssp EEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC--CTTTT-TG-GGTCCEE-EECCGGG---
T ss_pred eEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCC--CHHHh-hh-hhcCCEE-EEecccC---
Confidence 8898999987 99999999999999999999999999999975421 110 11100 00 1122344 4589997
Q ss_pred cCccce--EEEEEcCCchhHHHHHHHHHHHHhccc--cCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh--c
Q psy14428 390 YGERVG--TFSVLTPTSDETERIMSQLKILIRGFY--SNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG--F 463 (583)
Q Consensus 390 ~GlRiG--~lv~~~p~~~~~~~li~~l~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~--~ 463 (583)
|.|+| |+++ + +++++++........ ...+...+..+...++++.+.+..++.++..+.+.+.++. .
T Consensus 214 -g~~~G~g~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g 285 (356)
T 1v72_A 214 -GVLAAEAIVLF--N-----TSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGG 285 (356)
T ss_dssp -TCSSCEEEEES--S-----GGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred -CCcCccEEEEE--C-----HHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 44788 6665 4 357777665433222 1223344555566676654444444444444444444432 2
Q ss_pred cC-CCccchhhHHHHh
Q psy14428 464 YS-NPPIHGARIVTEI 478 (583)
Q Consensus 464 ~~-~~p~~g~~i~~~~ 478 (583)
+. ..|..++++|..+
T Consensus 286 ~~~~~~~~~~~~~~~~ 301 (356)
T 1v72_A 286 VEVLGGTEANILFCRL 301 (356)
T ss_dssp EEEESCCCSSEEEEEE
T ss_pred cEEccCCCccEEEEEc
Confidence 33 2466677777544
No 137
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.85 E-value=3.7e-20 Score=196.06 Aligned_cols=192 Identities=15% Similarity=0.118 Sum_probs=153.8
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G 279 (583)
+..+..+||+++|++++.. +.|++ ++|+ +|+.++ +. +..+||.|++++|+|...... ++..|
T Consensus 65 ~~p~~~~l~~~la~~~g~~-------~~i~~--~sG~-~ai~~~---~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G 130 (403)
T 3cog_A 65 GNPTRNCLEKAVAALDGAK-------YCLAF--ASGL-AATVTI---TH-LLKAGDQIICMDDVYGGTNRYFRQVASEFG 130 (403)
T ss_dssp -CHHHHHHHHHHHHHHTCS-------EEEEE--SCHH-HHHHHH---HT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGT
T ss_pred CCchHHHHHHHHHHHhCCC-------cEEEE--CCHH-HHHHHH---HH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcC
Confidence 4466789999999999642 56777 7774 888875 44 567799999999999975443 46789
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-eEEEEeccCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRH-LYPFFDMAYLGLTSG 358 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~-i~iI~De~Y~~l~~~ 358 (583)
++++.++. + |++.+++.+ .++++++++++|+||||.+++ +++|+++|++++ +++|+||+|..+.+.
T Consensus 131 ~~v~~v~~-~------d~~~l~~~i---~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~ 197 (403)
T 3cog_A 131 LKISFVDC-S------KIKLLEAAI---TPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ 197 (403)
T ss_dssp CEEEEECT-T------SHHHHHHHC---CTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC
T ss_pred CEEEEECC-C------CHHHHHHhc---CcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC
Confidence 99999887 2 788888777 568899999999999999997 778889999999 999999999988754
Q ss_pred CCCCchHHHHHHHHhcCcEEEEecCcccccccCc-cceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGE-RVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
. + + + .+..+++.|+||.++.+|. |+||+++ ++ +++++++.........+.+.+.|+++...+
T Consensus 198 ~---~---~----~-~~~div~~S~sK~~~g~~~~~~G~v~~--~~----~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l 260 (403)
T 3cog_A 198 R---P---L----A-LGADISMYSATKYMNGHSDVVMGLVSV--NC----ESLHNRLRFLQNSLGAVPSPIDCYLCNRGL 260 (403)
T ss_dssp C---T---T----T-TTCSEEEEETTTTTTCSSCCCCEEEEE--CC----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred C---c---c----c-cCCeEEEEcChhhccCCCCCeEEEEEE--Cc----HHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 2 1 1 1 2567999999999998774 7999999 65 478888887766666678889999988888
Q ss_pred CC
Q psy14428 438 SD 439 (583)
Q Consensus 438 ~~ 439 (583)
+.
T Consensus 261 ~~ 262 (403)
T 3cog_A 261 KT 262 (403)
T ss_dssp TT
T ss_pred hH
Confidence 75
No 138
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.85 E-value=5.6e-20 Score=194.64 Aligned_cols=175 Identities=11% Similarity=0.030 Sum_probs=134.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeE-EEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChh--hHHHHhhcCCeEE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLA-IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG--HVRFCTDSRLNVG 283 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~-i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~~~G~~~~ 283 (583)
...++|++++++++ +++++++ + ++|+++++.++ +..+..+||+|++++|+|.. +...++..|++++
T Consensus 45 ~~~~l~~~la~~~g------~~~~~~~~~--~~s~t~al~~~---~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~ 113 (416)
T 3isl_A 45 IMNETMEMLRELFQ------TKNRWAYPI--DGTSRAGIEAV---LASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVH 113 (416)
T ss_dssp HHHHHHHHHHHHTT------CCCSEEEEE--ESCHHHHHHHH---HHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhC------CCCCcEEEe--cCcHHHHHHHH---HHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeE
Confidence 35677777777764 3455555 6 88888999985 44456779999999999987 7778899999999
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKD 363 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~ 363 (583)
.+|+ ++ ++.+|++.+++.+.+ ++++++++++||||||.+++ +++|.++|+++|++||+|+++......- +
T Consensus 114 ~v~~-~~-~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~---~ 183 (416)
T 3isl_A 114 MLEC-EW-GTVFDPEDIIREIKK--VKPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGCEV---K 183 (416)
T ss_dssp EEEC-CT-TCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTSCC---C
T ss_pred EEec-CC-CCCCCHHHHHHHHhh--CCCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCCCc---c
Confidence 9998 54 357899999998852 35789999999999999998 6678999999999999999986433211 0
Q ss_pred hHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 364 AFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 364 ~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
.+..+..+++.|+||.++ .+.++|++++ + +++++++...
T Consensus 184 -------~~~~~~d~~~~s~~K~l~-g~~g~g~~~~--~-----~~~~~~~~~~ 222 (416)
T 3isl_A 184 -------VDEWKIDAAIGGTQKCLS-VPSGMAPITY--N-----ERVADVIAAR 222 (416)
T ss_dssp -------TTTTTCSEEECCSSSTTC-CCSSEEEEEE--C-----HHHHHHHHTC
T ss_pred -------hhhcCCCEEEecCccccC-CCCCeEEEEE--C-----HHHHHHhhcc
Confidence 112345689999999754 4456899999 6 5788887753
No 139
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.85 E-value=4.3e-20 Score=197.32 Aligned_cols=283 Identities=11% Similarity=0.041 Sum_probs=181.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..+.+....|. .++.+.+++.+.+.......| +.....+|++++++++. .+++|++ |+||
T Consensus 53 ~g~~ylD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-------~~~~v~~--~~sG 120 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGH--AHPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEAMP-------ALDKVRF--VNSG 120 (434)
T ss_dssp TCCEEEECCGGGTTCSSCB--TCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHCT-------TCSEEEE--ESSH
T ss_pred CCCEEEECCCchhccccCC--CCHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCch
Confidence 3556789988887666664 357888887776655323334 45566788888887753 3689999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCC--------------------eEEEEecccCCCCCCChhhH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRL--------------------NVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~--------------------~~~~v~~~d~~~~g~d~~~l 300 (583)
++|+..+..++... .+++.|++.+|+|..+.......+. .++.+|. -|++.+
T Consensus 121 sea~~~ai~~a~~~-~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 192 (434)
T 3l44_A 121 TEAVMTTIRVARAY-TGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF-------NNVETL 192 (434)
T ss_dssp HHHHHHHHHHHHHH-HCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHh-hCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc-------ccHHHH
Confidence 99999875443322 2478999999999876543333222 1222222 078888
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
++.+++..+++++++++.++|++|.+. +++.+++|.++|++||++||+||+|.+| ..+ .......+ +....
T Consensus 193 e~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g---~~~~~~~~-~~~~d--- 264 (434)
T 3l44_A 193 KEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFM---YGGAQDLL-GVTPD--- 264 (434)
T ss_dssp HHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSS---SSCHHHHH-TCCCS---
T ss_pred HHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecc---ccHHHHHc-CCCCC---
Confidence 888864334455555544445555544 8999999999999999999999999999 433 11222222 22222
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH---HhccccCCChHHHHHHHHHhC---Chhhhhhhhh-HHHH
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL---IRGFYSNPPIHGARIVTEILS---DPKLKAQCDE-TERI 452 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~---~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~-~~~~ 452 (583)
+.||||.++ +|+|+||+++ + +++++.+.+. .....++.++++|.++...++ ++.+.++..+ .+.+
T Consensus 265 i~t~sK~~~-~G~~iG~~~~--~-----~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l 336 (434)
T 3l44_A 265 LTALGKVIG-GGLPIGAYGG--K-----KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATL 336 (434)
T ss_dssp EEEEEGGGG-TTSSCEEEEE--C-----HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred eeehhhhhc-CCcCeeeEEE--c-----HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 558999998 8999999988 6 5788877652 123356788899888877665 3333333322 2233
Q ss_pred HHHHHHHHhh--ccCCCccchhhHHHHhc
Q psy14428 453 MSQLKILIRG--FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 453 ~~~l~~~~r~--~~~~~p~~g~~i~~~~l 479 (583)
.+.++.+... .....+..|.++++.+.
T Consensus 337 ~~~L~~~~~~~~~~~~~~~~g~~~~~~~~ 365 (434)
T 3l44_A 337 EKGILEQAAKHNIDITLNRLKGALTVYFT 365 (434)
T ss_dssp HHHHHHHHHHTTCCEEEEEETTEEEEEES
T ss_pred HHHHHHHHHhCCCCEEEEeeccEEEEEEe
Confidence 3334333221 11234556777776553
No 140
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.84 E-value=5.3e-20 Score=198.38 Aligned_cols=208 Identities=13% Similarity=0.119 Sum_probs=148.4
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCC----CCC
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYP----GVK 259 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~----~gd 259 (583)
+.+.+++.+.+... ...|.+..|..+||++++++++. ++|++ |+|+++|+.++.. .+.. +||
T Consensus 55 ~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~--------~~v~~--t~ggt~A~~~al~---~~~~~~~~~Gd 120 (467)
T 1ax4_A 55 NAMSDHQWAAMITG-DEAYAGSRNYYDLKDKAKELFNY--------DYIIP--AHQGRGAENILFP---VLLKYKQKEGK 120 (467)
T ss_dssp CCEEHHHHHHHHTC-CCCSSSCHHHHHHHHHHHHHHCC--------CEEEE--ESSHHHHHHHHHH---HHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhc-ccccccCccHHHHHHHHHHHcCC--------CcEEE--cCCcHHHHHHHHH---HHHHhhccCCC
Confidence 45555555544332 34688888999999999999953 58999 9999999998633 3333 599
Q ss_pred E---EEEcCCCChhhHHHHhhcCCeEEEEeccc---C-----CCCCCChhhHHHHHHcCC-CCcEEEEeCCCCCCC-CCC
Q psy14428 260 T---VYFPTPTWNGHVRFCTDSRLNVGAYRYFD---N-----KTNGLDFAGMMEDIKAMP-ERSILFLQTSSHNPT-GVD 326 (583)
Q Consensus 260 ~---Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d---~-----~~~g~d~~~l~~~l~~~~-~~~~~i~i~~p~NPT-G~~ 326 (583)
. |+++.|.|..+...++..|.+++.++... . .++.+|++.+++.+.... ++++++++++||||| |.+
T Consensus 121 ~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~ 200 (467)
T 1ax4_A 121 AKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQP 200 (467)
T ss_dssp CSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBC
T ss_pred ccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccC
Confidence 8 99998888988888999999988776521 1 134689999999985422 368899999999999 899
Q ss_pred CCHHHHHHHHHHHHhcCeEEEEeccCCC----------CCCCCCCCchHHHH-HHHHhcCcEEEEecCcccccccCccc-
Q psy14428 327 LSEDQWRQLAVVVKQRHLYPFFDMAYLG----------LTSGDFDKDAFSLR-YFAKEVGQLCLAQSFSKNMGLYGERV- 394 (583)
Q Consensus 327 ~s~~~~~~l~~~a~~~~i~iI~De~Y~~----------l~~~~~~~~~~~~~-~~~~~~~~vi~i~S~SK~~~l~GlRi- 394 (583)
++.+++++|+++|++||++||+||++.. +.+.+ .+...+. ......+ +++.|+||.++++ +
T Consensus 201 ~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d--~~~~s~sK~~g~~---~G 273 (467)
T 1ax4_A 201 VSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKN--ATIKEVIFDMYKYAD--ALTMSAKKDPLLN---IG 273 (467)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTT--CCHHHHHHHHGGGCS--EEEEETTSTTCCS---SC
T ss_pred CChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCC--Cchhhhhhhhccccc--eEEEeccccCCCC---cc
Confidence 9999999999999999999999998432 12222 1222221 0001122 4568999999865 3
Q ss_pred eEEEEEcCCchhHHHHHHHHHHH
Q psy14428 395 GTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 395 G~lv~~~p~~~~~~~li~~l~~~ 417 (583)
||+++ +++ .++++++...
T Consensus 274 g~~~~--~d~---~~l~~~~~~~ 291 (467)
T 1ax4_A 274 GLVAI--RDN---EEIFTLARQR 291 (467)
T ss_dssp EEEEE--SSC---HHHHHHHHHH
T ss_pred eEEEe--CCH---HHHHHHHHhh
Confidence 56666 543 1466666544
No 141
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.84 E-value=1.3e-19 Score=190.65 Aligned_cols=193 Identities=13% Similarity=0.121 Sum_probs=153.1
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G 279 (583)
+..+..+||+++++++... +.|++ ++| ++|+.++ +..+..+||.|++++|+|...... ++..|
T Consensus 50 ~~~~~~~l~~~la~~~~~~-------~~i~~--~sG-t~a~~~~---~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g 116 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEGGA-------GAVLT--NTG-MSAIHLV---TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_dssp CCHHHHHHHHHHHHHHTCS-------EEEEE--SSH-HHHHHHH---HHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTS
T ss_pred CCccHHHHHHHHHHHhCCC-------cEEEe--CCH-HHHHHHH---HHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcC
Confidence 4567789999999999631 56777 777 8999985 444566799999999999975443 46779
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. + |++.+++.++ ++++++++++||||||.+++ +++|.++|+++|+++|+||+|..+.+..
T Consensus 117 ~~~~~~~~-~------d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~ 183 (386)
T 1cs1_A 117 YRVLFVDQ-G------DEQALRAALA---EKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN 183 (386)
T ss_dssp CEEEEECT-T------CHHHHHHHHH---TCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC
T ss_pred CEEEEeCC-C------CHHHHHHhhc---cCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 99988876 2 7889988884 46788999999999999996 6788889999999999999999887642
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ ..+..+++.|+||.++.+|.|+ ||+++ ++ +++++++.........+.+.+.|.++...++
T Consensus 184 ------~~-----~~~~di~~~s~sK~~~~~~~~~~G~~~~--~~----~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 246 (386)
T 1cs1_A 184 ------PL-----ALGADLVLHSCTKYLNGHSDVVAGVVIA--KD----PDVVTELAWWANNIGVTGGAFDSYLLLRGLR 246 (386)
T ss_dssp ------GG-----GGTCSEEEEETTTTTTCSSCCCCEEEEE--SS----HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHT
T ss_pred ------cc-----ccCceEEEEcCcccccCCCCceeEEEEe--Cc----HHHHHHHHHHHHhcCCCCCHHHHHHHHhccc
Confidence 11 1357799999999999999998 99999 64 3688888776655456678888888777665
Q ss_pred C
Q psy14428 439 D 439 (583)
Q Consensus 439 ~ 439 (583)
.
T Consensus 247 ~ 247 (386)
T 1cs1_A 247 T 247 (386)
T ss_dssp T
T ss_pred H
Confidence 3
No 142
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.84 E-value=1.6e-19 Score=190.37 Aligned_cols=192 Identities=16% Similarity=0.084 Sum_probs=151.8
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcCC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSRL 280 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 280 (583)
.....+|+++++++++. ++.++ +++|++|+.++ +..+..+||+|++++|+|..+... ++..|+
T Consensus 58 ~~~~~~l~~~la~~~g~--------~~~i~--~~sG~~ai~~~---~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 124 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGA--------AGSAA--FGSGMGAISSS---TLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGI 124 (389)
T ss_dssp CHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH---HTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH---HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCC
Confidence 45567999999999853 24455 55667999874 444567799999999999987665 577899
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
+++.++.. |++.+++.+ .++++++++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+..
T Consensus 125 ~~~~v~~~-------d~~~l~~~i---~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~- 190 (389)
T 3acz_A 125 EVDLIDTS-------DVEKVKAAW---KPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK- 190 (389)
T ss_dssp EEEEECTT-------CHHHHHHTC---CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC-
T ss_pred EEEEECCC-------CHHHHHHhc---CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC-
Confidence 99988761 778887766 567899999999999999997 6778889999999999999998876532
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~ 439 (583)
+ + + .+..+++.|+||.++.+|.|+ ||+++ ++ +++++++.........+.+.+.++++...++.
T Consensus 191 --~---~----~-~~~di~~~S~sK~~~~~~~~~~G~v~~--~~----~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~ 254 (389)
T 3acz_A 191 --P---L----E-LGADIALHSVSKYINGHGDVIGGVSSA--KT----AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT 254 (389)
T ss_dssp --G---G----G-TTCSEEEEETTTTTTCSSCCCCEEEEE--SS----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred --c---c----c-cCCeEEEECChhhccCCCCceeEEEEE--Cc----HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH
Confidence 1 1 1 356799999999999999999 99999 63 26888888766545566788888888887765
No 143
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.84 E-value=5.3e-20 Score=194.46 Aligned_cols=196 Identities=11% Similarity=0.041 Sum_probs=144.4
Q ss_pred CChHHHHHHHHHhccCCCCCCCC--CCCCHHHHHHHHHHHhCCCCCCCCCCC-eEEEecCCchhHHHHHHHHHHHhCCCC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYAN--IGGDAKFCKLAAQLAYGEDFPAFKDNR-LAIVQGISGSGSLRVGTAFLERFYPGV 258 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~-I~i~~t~G~~~al~l~~~~l~~~~~~g 258 (583)
+++.+.+++.+.. ...|.+ .....++++.++++++. ++++ |++ |+|+++|+.++ +..+..+|
T Consensus 24 ~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~~~------~~~~~v~~--~~sgt~al~~~---~~~~~~~g 88 (411)
T 3nnk_A 24 ADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVFRT------ENRWTMLV--DGTSRAGIEAI---LVSAIRPG 88 (411)
T ss_dssp CCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHHTC------CCSEEEEE--ESCHHHHHHHH---HHHHCCTT
T ss_pred CCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHhCC------CCCcEEEE--CCCcHHHHHHH---HHHhcCCC
Confidence 4567777654321 122222 12346778888887753 2344 777 88899999985 44456779
Q ss_pred CEEEEcCCCChh--hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q psy14428 259 KTVYFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336 (583)
Q Consensus 259 d~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~ 336 (583)
|+|++++|+|.. +...++..|++++.+|+ +. ++.+|++.+++.+.+ .+++++++++||||||.+++ +++|+
T Consensus 89 d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~ 161 (411)
T 3nnk_A 89 DKVLVPVFGRFGHLLCEIARRCRAEVHTIEV-PW-GEVFTPDQVEDAVKR--IRPRLLLTVQGDTSTTMLQP---LAELG 161 (411)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTTHH
T ss_pred CEEEEecCCchHHHHHHHHHHcCCeEEEEec-CC-CCCCCHHHHHHHHhh--CCCeEEEEeCCCCCcceecc---HHHHH
Confidence 999999999976 88899999999999998 43 467899999998853 26788999999999999988 66788
Q ss_pred HHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
++|+++|++||+||++......- . .+..+..+++.|+||.++ .+.++||+++ + +++++++..
T Consensus 162 ~l~~~~~~~li~Dea~~~~~~~~------~----~~~~~~d~~~~s~~K~l~-~~~g~g~~~~--~-----~~~~~~~~~ 223 (411)
T 3nnk_A 162 EICRRYDALFYTDATASLGGNPL------E----TDVWGLDAVSAGMQKCLG-GPSGTSPITL--S-----ARMEEAIRR 223 (411)
T ss_dssp HHHHHHTCEEEEECTTTBTTBCC------C----TTTTTCSEEECCSTTTTC-CCSSEEEEEE--C-----HHHHHHHHT
T ss_pred HHHHHcCCEEEEECCcccCCccc------c----hhccCCcEEEecCccccC-CCCceEEEEE--C-----HHHHHHHhh
Confidence 89999999999999976432210 1 112245689999999854 4456899999 6 578888876
Q ss_pred H
Q psy14428 417 L 417 (583)
Q Consensus 417 ~ 417 (583)
.
T Consensus 224 ~ 224 (411)
T 3nnk_A 224 R 224 (411)
T ss_dssp T
T ss_pred c
Confidence 4
No 144
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.84 E-value=1.5e-20 Score=195.20 Aligned_cols=244 Identities=11% Similarity=-0.022 Sum_probs=153.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC--EEEEcCCCChhhHH---
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK--TVYFPTPTWNGHVR--- 273 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd--~Vlv~~P~y~~~~~--- 273 (583)
...|++..+..+|+++++++++. +..++ ++||++++.++ +..+..+|| .|+++.+++.....
T Consensus 40 ~~~y~~~~~~~~l~~~la~~~~~--------~~~i~--~~~G~~a~~~a---l~~~~~~gd~~~vi~~~~~~~~~~~~~~ 106 (357)
T 3lws_A 40 SDQYGTGAIIEPFEQKFADVLGM--------DDAVF--FPSGTMAQQVA---LRIWSDETDNRTVAYHPLCHLEIHEQDG 106 (357)
T ss_dssp CEETTEETTHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH---HHHHHHHHTCCEEEECTTCHHHHSSTTH
T ss_pred cccccCChHHHHHHHHHHHHhCC--------CcEEE--ecCcHHHHHHH---HHHHhhcCCCcEEEecccceeeeeccch
Confidence 35588778899999999999863 22344 45567788764 333444477 67777766443322
Q ss_pred HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEeccC
Q psy14428 274 FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPT-GVDLSEDQWRQLAVVVKQRHLYPFFDMAY 352 (583)
Q Consensus 274 ~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPT-G~~~s~~~~~~l~~~a~~~~i~iI~De~Y 352 (583)
.....|++++.++. +++.+|++.+++. .+++++++++||||| |.+++.+++++|+++|+++|++||+||+|
T Consensus 107 ~~~~~g~~~~~v~~---~~~~~d~~~l~~~-----~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~ 178 (357)
T 3lws_A 107 LKELHPIETILVGA---ADRLMTLDEIKAL-----PDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGAR 178 (357)
T ss_dssp HHHHSSCEEEECSC---TTSCCCHHHHHTC-----CSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred hhhccCcEEEEecC---CCCCcCHHHHhcC-----cCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECch
Confidence 34556899988875 3357899888764 237889999999998 99999999999999999999999999998
Q ss_pred CCC--CCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCC--ChH
Q psy14428 353 LGL--TSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNP--PIH 428 (583)
Q Consensus 353 ~~l--~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~--s~~ 428 (583)
... .+.+ . +...+....+ + ++.||||+++.++. ||+++ + +++++++.+.......+. +..
T Consensus 179 ~~~~~~~~~--~---~~~~~~~~~d-~-~~~s~sK~~~~~~g--g~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~ 242 (357)
T 3lws_A 179 LFEMLPYYE--K---TAAEIAGLFD-S-IYISFYKGLGGIAG--AILAG--P-----AAFCQTARIWKRRYGGDLISLYP 242 (357)
T ss_dssp HHHHHHHHT--C---CHHHHHTTSS-E-EEEESSSTTCCSSC--EEEEE--C-----HHHHHHHHHHHHHTTCCCSCCHH
T ss_pred hhhhhhhcC--C---ChHHHHhcCC-E-EEEeccccCCCCce--EEEEc--C-----HHHHHHHHHHHHHhcCCcccchH
Confidence 621 1111 1 1222222233 3 37899999943433 99998 6 588888887654443322 233
Q ss_pred HHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh--ccCC--CccchhhHHHHhcCC
Q psy14428 429 GARIVTEILSDPKLKAQCDETERIMSQLKILIRG--FYSN--PPIHGARIVTEILSD 481 (583)
Q Consensus 429 ~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~--~~~~--~p~~g~~i~~~~l~~ 481 (583)
.+.++...+++ +.+.+++..+....+.+.++. .+.. .|++++++|+.+...
T Consensus 243 ~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~ 297 (357)
T 3lws_A 243 YIVSADYYYEL--RKDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQ 297 (357)
T ss_dssp HHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESC
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCC
Confidence 33333344432 111111112222222222332 2332 467888888877653
No 145
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.84 E-value=2.7e-19 Score=188.08 Aligned_cols=193 Identities=10% Similarity=0.028 Sum_probs=150.6
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCCEE
Q psy14428 183 LPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVKTV 261 (583)
Q Consensus 183 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd~V 261 (583)
++.+.+++.+.+... .|.+..+..+||++++++++. +++++ |+|+++|+.++ +..+ ..+||+|
T Consensus 19 ~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~al~~~---~~~~~~~~gd~V 82 (393)
T 1mdo_A 19 GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTGN--------QYAVA--VSSATAGMHIA---LMALGIGEGDEV 82 (393)
T ss_dssp CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHCC--------SEEEE--ESCHHHHHHHH---HHHTTCCTTCEE
T ss_pred CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhCC--------CcEEE--ecChHHHHHHH---HHHcCCCCCCEE
Confidence 356677777766542 245677899999999999963 36888 99999999985 4455 6779999
Q ss_pred EEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q psy14428 262 YFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ 341 (583)
Q Consensus 262 lv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~ 341 (583)
++++|+|..+...++..|++++.+++ +++++.+|++.+++.+ .+++++++++ ||||...+ +++|.++|++
T Consensus 83 l~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l---~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~ 152 (393)
T 1mdo_A 83 ITPSMTWVSTLNMIVLLGANPVMVDV-DRDTLMVTPEHIEAAI---TPQTKAIIPV---HYAGAPAD---LDAIYALGER 152 (393)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECB-CTTTCCBCHHHHHHHC---CTTEEEECCB---CGGGCCCC---HHHHHHHHHH
T ss_pred EeCCCccHhHHHHHHHCCCEEEEEec-cCCcCCCCHHHHHHhc---CCCceEEEEe---CCCCCcCC---HHHHHHHHHH
Confidence 99999999999999999999999998 6555678999998887 4567877765 48999875 6778889999
Q ss_pred cCeEEEEeccCCCC-CCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 342 RHLYPFFDMAYLGL-TSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 342 ~~i~iI~De~Y~~l-~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
++++||+||+|... .+.+ .+ + .. ..+++.||||+.+++|.|+||+++ ++ +++++++....
T Consensus 153 ~~~~li~D~a~~~g~~~~~--~~---~----~~--~d~~~~S~~k~K~l~~~~~g~~~~--~~----~~~~~~l~~~~ 213 (393)
T 1mdo_A 153 YGIPVIEDAAHATGTSYKG--RH---I----GA--RGTAIFSFHAIKNITCAEGGIVVT--DN----PQFADKLRSLK 213 (393)
T ss_dssp HTCCBCEECTTCTTCEETT--EE---T----TS--SSEEEEECCTTSSSCSSSCEEEEE--SC----HHHHHHHHHHT
T ss_pred cCCeEEEECccccCCeECC--ee---c----CC--CCeEEEeCCCCCccccccceEEEe--CC----HHHHHHHHHHH
Confidence 99999999999864 3432 11 1 11 678999999555556679999999 65 36888877654
No 146
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.84 E-value=2.4e-20 Score=196.96 Aligned_cols=280 Identities=14% Similarity=0.081 Sum_probs=182.0
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCC---CCHH--HHH-----HHHHHHhCCCCCCCCCCCe
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIG---GDAK--FCK-----LAAQLAYGEDFPAFKDNRL 232 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~---G~~~--Lr~-----aia~~~~~~~g~~~~~~~I 232 (583)
.+.+++..+... .++.+.+++.+.+.+....+|++.. |.+. +++ .++++++ +++++|
T Consensus 23 ~~~i~~~~~~~~-------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g------~~~~~i 89 (407)
T 2dkj_A 23 REGLELIASENF-------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG------AAWANV 89 (407)
T ss_dssp HTSEECCTTCCC-------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT------CSEEEC
T ss_pred hcceeeccCCCC-------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhC------CCcceE
Confidence 356888887753 2578888887776532234565443 6554 444 5556553 235667
Q ss_pred EEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh---HHHHhhcCCe--EEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 233 AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH---VRFCTDSRLN--VGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 233 ~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~---~~~~~~~G~~--~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
++ ++|+. |+.++ +..+..+||+|++++|+|..+ ...++..|.+ .+++++ +++++.+|++.+++.+..
T Consensus 90 ~~--~sGt~-a~~~~---~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~l~~- 161 (407)
T 2dkj_A 90 QP--HSGSQ-ANMAV---YMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGV-RPDTELIDLEEVRRLALE- 161 (407)
T ss_dssp CC--SSHHH-HHHHH---HHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECC-CTTTSSCCHHHHHHHHHH-
T ss_pred Ee--cchHH-HHHHH---HHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCC-CcccCccCHHHHHHHHhh-
Confidence 77 77764 88885 444566799999999999888 3455566664 444444 333578999999998852
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC-CCCCCCCCchHHHHHHHHhcCcEEEEecCccc
Q psy14428 308 PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG-LTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKN 386 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~-l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 386 (583)
.+++++++++|+|| ...+ +++|.++|+++|++||+||+|.. +.+.+. .... .+ ...+++.||||.
T Consensus 162 -~~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~~~~----~~--~~di~~~s~sK~ 227 (407)
T 2dkj_A 162 -HRPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGL--HPNP----LP--YAHVVTSTTHKT 227 (407)
T ss_dssp -HCCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTC--SCCC----TT--TCSEEEEESSGG
T ss_pred -cCCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCc--cCCc----cc--cccEEEEecccc
Confidence 25677888999998 4454 78889999999999999999987 544331 1111 11 257889999994
Q ss_pred ccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHH-HHHHHhCChhhhhhhhhHHHHHHHHHHHHhhccC
Q psy14428 387 MGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGAR-IVTEILSDPKLKAQCDETERIMSQLKILIRGFYS 465 (583)
Q Consensus 387 ~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~ 465 (583)
++|.|+||+++ ++ +++++++.........+.+...+. ++...++.
T Consensus 228 --l~g~~~G~~~~--~~----~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~-------------------------- 273 (407)
T 2dkj_A 228 --LRGPRGGLILS--ND----PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFE-------------------------- 273 (407)
T ss_dssp --GCCCSCEEEEE--SC----HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH--------------------------
T ss_pred --CCCCCceEEEE--CC----HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHH--------------------------
Confidence 57999999999 64 367777776553333333222222 22222211
Q ss_pred CCccchhhHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-ccccceeecCCCh
Q psy14428 466 NPPIHGARIVTEILSDPKLKAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHIT-NQKGMFCYTGLSA 536 (583)
Q Consensus 466 ~~p~~g~~i~~~~l~~~~~~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~-~~~g~f~~~~l~~ 536 (583)
...+.++++++++.+.++.+.+.|++.+ +.... +..|.|.|..++.
T Consensus 274 ---------------------~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~ 320 (407)
T 2dkj_A 274 ---------------------ALQPEFKEYSRLVVENAKRLAEELARRG----YRIVTGGTDNHLFLVDLRP 320 (407)
T ss_dssp ---------------------HHSHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGG
T ss_pred ---------------------HHHhhHHHHHHHHHHHHHHHHHHHHhCC----ceeecCCCCceEEEEECcc
Confidence 0012345667777888888888888763 33333 3567777876653
No 147
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.84 E-value=1.1e-19 Score=193.65 Aligned_cols=284 Identities=12% Similarity=0.014 Sum_probs=182.8
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|++.|.+....|. .++.+.+++.+.++......| ..++++++++++.+..+ .+++|++ |+||
T Consensus 50 ~g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~--~~gg 117 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICGH--AHPEVIEALKVAMEKGTSFGA-----PCALENVLAEMVNDAVP---SIEMVRF--VNSG 117 (427)
T ss_dssp TSCEEEESSGGGTTCTTCB--TCHHHHHHHHHHHTTCSCCSS-----CCHHHHHHHHHHHHHST---TCSEEEE--ESSH
T ss_pred CCCEEEECCCchhhhccCC--CCHHHHHHHHHHHHhCCCcCC-----CCHHHHHHHHHHHHhCC---CCCEEEE--eCCH
Confidence 3456789999987666664 357888888877755322223 34556666666655443 4789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc-CC-------------------eEEEEecccCCCCCCChhhH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS-RL-------------------NVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~-------------------~~~~v~~~d~~~~g~d~~~l 300 (583)
++|++.+..+...+.. ++.|++.+|+|..+...+... |. .++.+|. + |++.+
T Consensus 118 sea~~~al~~a~~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-d~~~l 189 (427)
T 3fq8_A 118 TEACMAVLRIMRAYTG-RDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY------N-DLEAV 189 (427)
T ss_dssp HHHHHHHHHHHHHHHC-CCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET------T-CHHHH
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC------C-CHHHH
Confidence 9999987544444433 589999999997654322222 11 1333332 0 78899
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDLS-EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~s-~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
++.+++...++++++++.++|++|.+.+ ++.+++|.++|++||++||+||+|.+| ..+ ....... .+...-
T Consensus 190 e~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g---~~~~~~~----~~~~~d 261 (427)
T 3fq8_A 190 KALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIA---YGGVQEK----FGVTPD 261 (427)
T ss_dssp HHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTB---TTHHHHH----TTCCCS
T ss_pred HHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC---cchhhHh----cCCCCC
Confidence 9988765556777777777778886665 566999999999999999999999998 443 1112211 222223
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHhC---ChhhhhhhhhHH-HH
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEILS---DPKLKAQCDETE-RI 452 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~-~~ 452 (583)
+.||||.++ +|+|+||+++ + +++++.+.... ....++.+++++.++...++ ++.+.++..+.. ..
T Consensus 262 i~t~sK~~~-~G~~~G~~~~--~-----~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~ 333 (427)
T 3fq8_A 262 LTTLGKIIG-GGLPVGAYGG--K-----REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRL 333 (427)
T ss_dssp EEEECGGGG-TTSSCEEEEE--C-----HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred hhhhhhhhh-CCcceEEEEE--c-----HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 569999999 8999999998 6 57888776532 22344668888888877764 333333333322 33
Q ss_pred HHHHHHHHhh-cc-CCCccchhhHHHHhcC
Q psy14428 453 MSQLKILIRG-FY-SNPPIHGARIVTEILS 480 (583)
Q Consensus 453 ~~~l~~~~r~-~~-~~~p~~g~~i~~~~l~ 480 (583)
.+.++.+... .. ..++..|.++++.+..
T Consensus 334 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 363 (427)
T 3fq8_A 334 SDGLLAIAQETGHAACGGQVSGMFGFFFTE 363 (427)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTEEEEESSS
T ss_pred HHHHHHHHHhCCCCeEEEEeeeEEEEEEec
Confidence 3334433322 12 2334557777666543
No 148
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.84 E-value=2.4e-19 Score=189.15 Aligned_cols=193 Identities=15% Similarity=0.094 Sum_probs=156.5
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G 279 (583)
+.....+||+.++++++. +++++ ++||++|+.++ +..+..+||+|++++|+|..+...+ +..|
T Consensus 64 ~~~~~~~l~~~la~~~g~--------~~~~~--~~sGt~A~~~a---l~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g 130 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDA--------AFGRA--FSSGMAAADCA---LRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWN 130 (392)
T ss_dssp CCHHHHHHHHHHHHHTTC--------SEEEE--ESSHHHHHHHH---HHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGT
T ss_pred CChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcC
Confidence 445567899999998753 35777 88889999885 4445677999999999999877766 6789
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.+++ + |++.+++.+ .++++++++++|+||||.+.+ +++|.++|+++|+++|+||+|.......
T Consensus 131 ~~~~~v~~-~------d~~~l~~~i---~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~ 197 (392)
T 3qhx_A 131 VEYTPVAL-A------DLDAVRAAI---RPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ 197 (392)
T ss_dssp CEEEEECT-T------CHHHHHHHC---CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC
T ss_pred cEEEEeCC-C------CHHHHHHhh---CCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 99998877 2 788888877 568999999999999999987 7778999999999999999998664332
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+ . ..+..+++.|+||.++.+| +|+||+++ ++ +++++.+.........+.+++.++++...++
T Consensus 198 ----~--~-----~~~~di~~~S~sK~lg~~g~~~~G~v~~--~~----~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 260 (392)
T 3qhx_A 198 ----P--L-----SLGADVVLHSTTKYIGGHSDVVGGALVT--ND----EELDQSFAFLQNGAGAVPGPFDAYLTMRGLK 260 (392)
T ss_dssp ----G--G-----GGTCSEEEEETTTTTTCSSCCCCEEEEE--SC----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ----h--H-----HhCCcEEEEcCccccCCCCCceEEEEEE--Cc----HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 1 1 1245689999999999777 89999999 65 4788888887777778889999999888887
Q ss_pred C
Q psy14428 439 D 439 (583)
Q Consensus 439 ~ 439 (583)
.
T Consensus 261 ~ 261 (392)
T 3qhx_A 261 T 261 (392)
T ss_dssp T
T ss_pred H
Confidence 5
No 149
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.84 E-value=5e-20 Score=193.22 Aligned_cols=197 Identities=10% Similarity=-0.011 Sum_probs=143.9
Q ss_pred CChHHHHHHHHHhccCCCCCCCC--CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYAN--IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK 259 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd 259 (583)
+++.+.+++.+.. ...|.+ .....++++++++++... .+++|++ |+|+++++.++ +..+..+||
T Consensus 34 ~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~v~~--~~gg~~al~~~---~~~~~~~gd 99 (393)
T 3kgw_A 34 LAPRVLAAGSLRM----IGHMQKEMLQIMEEIKQGIQYVFQTR-----NPLTLVV--SGSGHCAMETA---LFNLLEPGD 99 (393)
T ss_dssp CCHHHHHHTTCCC----CCTTSHHHHHHHHHHHHHHHHHHTCC-----CSEEEEE--SCCTTTHHHHH---HHHHCCTTC
T ss_pred CCHHHHHHhcccc----cCcccHHHHHHHHHHHHHHHHHhCCC-----CCcEEEE--eCCcHHHHHHH---HHhcCCCCC
Confidence 4567777654321 112222 234567888888887531 2346999 99999999985 445577799
Q ss_pred EEEEcCCCCh--hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q psy14428 260 TVYFPTPTWN--GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAV 337 (583)
Q Consensus 260 ~Vlv~~P~y~--~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~ 337 (583)
+|+++.|+|. .+...++..|++++.+|+ +++ +.+|++.+++.+.. .+++++++++||||||.+++ +++|.+
T Consensus 100 ~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~---l~~i~~ 172 (393)
T 3kgw_A 100 SFLTGTNGIWGMRAAEIADRIGARVHQMIK-KPG-EHYTLQEVEEGLAQ--HKPVLLFLVHGESSTGVVQP---LDGFGE 172 (393)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEC-CTT-CCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECC---CTTHHH
T ss_pred EEEEEeCCchhHHHHHHHHHcCCceEEEeC-CCC-CCCCHHHHHHHHhh--CCCcEEEEeccCCcchhhcc---HHHHHH
Confidence 9999999875 336778889999999998 443 57899999999853 26788999999999999998 667899
Q ss_pred HHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 338 VVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 338 ~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
+|+++|++||+||+|......- + .+..+..+++.|+||.++ .+.++||+++ + +++++.+...
T Consensus 173 l~~~~~~~li~De~~~~g~~~~---~-------~~~~~~d~~~~s~sK~~~-~~~g~g~~~~--~-----~~~~~~~~~~ 234 (393)
T 3kgw_A 173 LCHRYQCLLLVDSVASLGGVPI---Y-------MDQQGIDIMYSSSQKVLN-APPGISLISF--N-----DKAKYKVYSR 234 (393)
T ss_dssp HHHHTTCEEEEECTTTTTTSCC---C-------TTTTTCCEEEEESSSTTC-CCSSCEEEEE--C-----HHHHHHHHTC
T ss_pred HHHHcCCEEEEECCccccCccc---c-------hhhcCCCEEEecCccccc-CCCceeEEEE--C-----HHHHHHHhcc
Confidence 9999999999999987322110 0 112345688899999774 3345899999 6 5788887754
No 150
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.84 E-value=1.3e-19 Score=192.48 Aligned_cols=188 Identities=10% Similarity=0.043 Sum_probs=143.5
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh----cCCeE
Q psy14428 207 GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD----SRLNV 282 (583)
Q Consensus 207 G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~ 282 (583)
...+|++.++++.+ .+++++ ++||++|+.++ +..++.+||.|++++|+|..+...++. .|+++
T Consensus 82 ~~~~l~~~la~~~g--------~~~~~~--~~sG~~Ai~~a---l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~ 148 (414)
T 3ndn_A 82 TVSVFEERLRLIEG--------APAAFA--TASGMAAVFTS---LGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQT 148 (414)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEE--ESSHHHHHHHH---HHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEE
T ss_pred HHHHHHHHHHHHHC--------CCcEEE--ECCHHHHHHHH---HHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEE
Confidence 34667777777764 256777 88889999874 455677899999999999998877755 89999
Q ss_pred EEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCC
Q psy14428 283 GAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDK 362 (583)
Q Consensus 283 ~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~ 362 (583)
+.+|+ + |++.+++++ .++++++++++|+||||.+.+ +++|+++|+++|++||+||+|.......
T Consensus 149 ~~v~~-~------d~~~l~~ai---~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~--- 212 (414)
T 3ndn_A 149 VFVDG-D------DLSQWERAL---SVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQ--- 212 (414)
T ss_dssp EEECT-T------CHHHHHHHT---SSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC---
T ss_pred EEeCC-C------CHHHHHHhc---CCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 99987 2 788888887 567889999999999999977 6678889999999999999997332211
Q ss_pred chHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHH-HHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 363 DAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMS-QLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 363 ~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~-~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ ..+..+++.|+||.++.+| +|+|++++ + ++.+. .+.........+.+...++++...++
T Consensus 213 ---~~-----~~g~div~~S~sK~l~~~G~~~~G~vv~--~-----~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~ 275 (414)
T 3ndn_A 213 ---GF-----PLGVDVVVYSGTKHIDGQGRVLGGAILG--D-----REYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE 275 (414)
T ss_dssp ---CG-----GGTCSEEEEETTTTTTCSSCCCCEEEEE--C-----HHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG
T ss_pred ---ch-----hcCCCeEeccCCccccCCCCceEEEEEE--C-----HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 11 2245689999999999889 89999999 6 35554 66655555555667776666665554
No 151
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.84 E-value=1.1e-19 Score=189.76 Aligned_cols=197 Identities=11% Similarity=0.053 Sum_probs=140.5
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTV 261 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~V 261 (583)
+++.+.+++.+... ..|.+ +..++++++.+++.+..|.+.+.+.+++ |+|+++++.++ +..+..+||+|
T Consensus 30 ~~~~v~~a~~~~~~----~~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~--~~ggt~al~~~---~~~~~~~gd~v 98 (376)
T 3f0h_A 30 SSEEVRAIGAEQVP----YFRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFM--TCSSTGSMEAV---VMNCFTKKDKV 98 (376)
T ss_dssp CCHHHHHHHTSCCC----CCSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEE--SSCHHHHHHHH---HHHHCCTTCCE
T ss_pred CcHHHHHHhcCCCC----CCCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEE--cCChhHHHHHH---HHhccCCCCeE
Confidence 45677776654321 12222 3334444444444444444433456777 89999999985 44556779999
Q ss_pred EEcCCCChhhH--HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 262 YFPTPTWNGHV--RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 262 lv~~P~y~~~~--~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
++++|+|.... ..+...|++++.++. +. ++++|++.+++.+ .++++++++++||||||.+++ +++|.++|
T Consensus 99 i~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~---~~~~~~v~~~~~~nptG~~~~---l~~i~~l~ 170 (376)
T 3f0h_A 99 LVIDGGSFGHRFVQLCEIHEIPYVALKL-EH-GKKLTKEKLYEYD---NQNFTGLLVNVDETSTAVLYD---TMMIGEFC 170 (376)
T ss_dssp EEEESSHHHHHHHHHHHHTTCCEEEEEC-CT-TCCCCHHHHHTTT---TSCCCEEEEESEETTTTEECC---HHHHHHHH
T ss_pred EEEeCChhhHHHHHHHHHcCCceEEEeC-CC-CCCCCHHHHHHhh---ccCceEEEEecccCCcceecC---HHHHHHHH
Confidence 99999766543 356778999999998 43 4788999987755 567889999999999999999 77889999
Q ss_pred HhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 340 KQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 340 ~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
+++|++||+|+++......- .+ +..+..+++.|+||.++ .+| +|++++ + +++++++..
T Consensus 171 ~~~~~~li~D~~~~~~~~~~------~~----~~~~~d~~~~s~~K~l~~~~G--~g~~~~--~-----~~~~~~~~~ 229 (376)
T 3f0h_A 171 KKNNMFFVCDCVSAFLADPF------NM----NECGADVMITGSQKVLACPPG--ISVIVL--A-----PRGVERVEK 229 (376)
T ss_dssp HHTTCEEEEECTTTTTTSCC------CH----HHHTCSEEEEETTTTTCCCSS--CEEEEE--C-----HHHHHHHHT
T ss_pred HHcCCEEEEEcCccccCccc------cc----cccCccEEEecCcccccCCCc--eEEEEE--C-----HHHHHHhhc
Confidence 99999999999988665321 12 12234588999999998 666 578888 6 578877764
No 152
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.83 E-value=1.8e-19 Score=193.43 Aligned_cols=291 Identities=12% Similarity=0.069 Sum_probs=182.9
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC-CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI-GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~-~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
+...+|++.+.|....|.. ++.+.+++.+.+... . |... .+..++++++++.+.+..+ ..+++|++ |+|+
T Consensus 49 g~~~lD~~~~~~~~~lG~~--~~~v~~a~~~~~~~~--~-~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~--~~gg 119 (449)
T 3a8u_X 49 GRKVYDSLSGLWTCGAGHT--RKEIQEAVAKQLSTL--D-YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFF--TDSG 119 (449)
T ss_dssp CCEEEETTHHHHTCTTCBS--CHHHHHHHHHHTTTC--S-CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEE--ESSH
T ss_pred CCEEEECCccHhhccCCCC--CHHHHHHHHHHHHhC--C-CccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--cCcH
Confidence 3456888888875555533 578888888777542 1 2222 4455677777777766543 46789999 9999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhH-HHHhhcCC------------eEEEEeccc-CC-C-CCCC---
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHV-RFCTDSRL------------NVGAYRYFD-NK-T-NGLD--- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~-~~~~~~G~------------~~~~v~~~d-~~-~-~g~d--- 296 (583)
++|++++..++..+. +++|+|++.+|+|..+. ..+...|. .+..++... .. . .++|
T Consensus 120 sea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~ 199 (449)
T 3a8u_X 120 SECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKE 199 (449)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHH
Confidence 999998754433221 25899999999998764 34444331 233344310 00 0 1356
Q ss_pred -----hhhHHHHHHcCC-CCcEEEEeCCCC-CCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHH
Q psy14428 297 -----FAGMMEDIKAMP-ERSILFLQTSSH-NPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLR 368 (583)
Q Consensus 297 -----~~~l~~~l~~~~-~~~~~i~i~~p~-NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~ 368 (583)
++.+++.+++.. +++++++ ++|+ ||||. +.+++++++|.++|+++|++||+||+|.+|...+ ....+.
T Consensus 200 ~~~~~~~~le~~l~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g---~~~~~~ 275 (449)
T 3a8u_X 200 GGIALADELLKLIELHDASNIAAVF-VEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTG---SMFGAD 275 (449)
T ss_dssp SHHHHHHHHHHHHHHHCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEE-EcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccC---cchhhh
Confidence 888888885422 3445554 5554 67996 6689999999999999999999999998886544 111222
Q ss_pred HHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHH---------hccccCCChHHHHHHHHHhC
Q psy14428 369 YFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILI---------RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 369 ~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~---------~~~~~~~s~~~q~~~~~~l~ 438 (583)
.+ +....++ ||||.++ +| +|+||+++ + +++++.+.... ....++.+.++|.++...++
T Consensus 276 ~~-~~~~di~---s~sK~l~-~G~~~~G~~~~--~-----~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~ 343 (449)
T 3a8u_X 276 SF-GVTPDLM---CIAKQVT-NGAIPMGAVIA--S-----TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALC 343 (449)
T ss_dssp HH-TCCCSEE---EECGGGG-TTSSCCEEEEE--E-----HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHH
T ss_pred hc-CCCCCEE---EEccccc-CCCCceEEEEE--C-----HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHH
Confidence 22 2223433 9999998 68 99999998 6 57888887641 12345678888888777765
Q ss_pred C---hhhhhhhhhHHHHHHHHHHHHhhc--cC---CCccchhhHHHHhcC
Q psy14428 439 D---PKLKAQCDETERIMSQLKILIRGF--YS---NPPIHGARIVTEILS 480 (583)
Q Consensus 439 ~---~~~~~~~~~~~~~~~~l~~~~r~~--~~---~~p~~g~~i~~~~l~ 480 (583)
. +.+.++..+ ..+.+++.++.. +. ..+..|.++|+.+..
T Consensus 344 ~~~~~~~~~~~~~---~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~ 390 (449)
T 3a8u_X 344 LLQKENLVQSVAE---VAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAP 390 (449)
T ss_dssp HHHHTTHHHHHHH---HHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECC
T ss_pred HHHhcCHHHHHHH---HHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEec
Confidence 2 223333222 222222222221 11 124567788777654
No 153
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.83 E-value=5.1e-20 Score=197.99 Aligned_cols=296 Identities=13% Similarity=0.022 Sum_probs=190.1
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..+.+....|. .++.+.+++.+.+.. ...|....+..+++.++++++.+..+.. .+++|++ |+||
T Consensus 59 ~g~~ylD~~~~~~~~~lGh--~~p~v~~A~~~~~~~--~~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~--~~sG 131 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGN--SAPKVVEAVRSQVGD--FTHTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSAL--FNSG 131 (451)
T ss_dssp TSCEEEESSHHHHTCTTCT--TCHHHHHHHHHHHTT--CSCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEE--ESSH
T ss_pred CCCEEEEcCCCccccccCC--CCHHHHHHHHHHHHh--cccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEE--eCcH
Confidence 3456789988877666664 357888888777754 2346555667778888888876654321 3579999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCC--------------eEEEEecc----c----CCCCCC---
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRL--------------NVGAYRYF----D----NKTNGL--- 295 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~--------------~~~~v~~~----d----~~~~g~--- 295 (583)
++|++.+..++... .+++.|++.+|+|..+.......+. .+..+|+. + .+..++
T Consensus 132 seA~~~Alk~a~~~-~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 210 (451)
T 3oks_A 132 SEAVENAVKIARSH-THKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGEL 210 (451)
T ss_dssp HHHHHHHHHHHHHH-HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHH
T ss_pred HHHHHHHHHHHHHh-cCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHH
Confidence 99999875443322 2358999999999877654443321 34555542 0 000111
Q ss_pred ChhhHHHHHHcC-CCCcEEEEeCCCCCCCCCC--CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHH
Q psy14428 296 DFAGMMEDIKAM-PERSILFLQTSSHNPTGVD--LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAK 372 (583)
Q Consensus 296 d~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~--~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~ 372 (583)
+++.+++.+++. .+.....++++|.||+|.+ .+++.+++|.++|++||++||+||+|.+|...+. .....
T Consensus 211 ~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~---- 283 (451)
T 3oks_A 211 AAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA---MFACE---- 283 (451)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSGGG----
T ss_pred HHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc---chhhh----
Confidence 244444555432 3355667777888888744 4777899999999999999999999999876541 11111
Q ss_pred hcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC---ChhhhhhhhhH
Q psy14428 373 EVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS---DPKLKAQCDET 449 (583)
Q Consensus 373 ~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~ 449 (583)
..+....+.||||.++ .|+|+||+++ + +++++.+........++.++++|.++...++ ++.+.++..+.
T Consensus 284 ~~~~~pdi~t~sK~l~-~G~~iG~v~~--~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~ 355 (451)
T 3oks_A 284 HEGIDPDLIVTAKGIA-GGLPLSAVTG--R-----AEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQI 355 (451)
T ss_dssp GGTCCCSEEEECGGGG-TTSSCEEEEE--E-----HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hcCCCCCeeeehhhhh-CCcceEEEEE--C-----HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 1122222348999998 5999999999 6 5788888766666677889999998888876 22333332222
Q ss_pred H-HHHHHHHHHHhh--ccCCCccchhhHHHHhc
Q psy14428 450 E-RIMSQLKILIRG--FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 450 ~-~~~~~l~~~~r~--~~~~~p~~g~~i~~~~l 479 (583)
. .+.+.++++... .....+..|.++++.+.
T Consensus 356 ~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~ 388 (451)
T 3oks_A 356 EKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELV 388 (451)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEB
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEe
Confidence 2 233333333222 22344556777777664
No 154
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.83 E-value=2.8e-19 Score=188.94 Aligned_cols=227 Identities=13% Similarity=0.093 Sum_probs=154.9
Q ss_pred cCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC--CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHH
Q psy14428 168 LGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA--NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLR 245 (583)
Q Consensus 168 l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~--~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~ 245 (583)
.+.+.|+.. .+.+..+.+.++..........+.|. +.....+|++.++++++. ++.|++ ++| ++|+.
T Consensus 26 ~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~-------~~~i~~--~sG-~~a~~ 94 (398)
T 1gc0_A 26 GALVPPVYQ-TATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGG-------EAGLAL--ASG-MGAIT 94 (398)
T ss_dssp TBSSCCBCC-CSCBCCC---------------------CCHHHHHHHHHHHHHHTC-------SEEEEE--SSH-HHHHH
T ss_pred CCcCCCccC-CCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCC-------CcEEEE--CCH-HHHHH
Confidence 345555433 22334555555543211111123343 556678999999999853 134444 554 79998
Q ss_pred HHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCC
Q psy14428 246 VGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHN 321 (583)
Q Consensus 246 l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~N 321 (583)
++ +..+..+||+|++++|+|..+...+ +..|++++.++. + |++.+++.+ .++++++++++|+|
T Consensus 95 ~~---l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~------d~~~l~~~i---~~~~~~v~~~~~~n 161 (398)
T 1gc0_A 95 ST---LWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-A------DLQALEAAM---TPATRVIYFESPAN 161 (398)
T ss_dssp HH---HHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-T------CHHHHHHHC---CTTEEEEEEESSCT
T ss_pred HH---HHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-C------CHHHHHHhc---CCCCeEEEEECCCC
Confidence 85 4445667999999999999887766 677999988876 1 788888877 56789999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEE
Q psy14428 322 PTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVL 400 (583)
Q Consensus 322 PTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~ 400 (583)
|||.+++ +++|.++|+++|+++|+||+|..+.+.. ++ ..+..+++.|+||.++.+|.|+ ||+++
T Consensus 162 ptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~------~~-----~~~~d~~~~S~sK~~~~~~~~~~G~l~~- 226 (398)
T 1gc0_A 162 PNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR------PL-----ELGADLVVHSATKYLSGHGDITAGIVVG- 226 (398)
T ss_dssp TTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC------GG-----GGTCSEEEEETTTTTTCSSSCCCEEEEE-
T ss_pred CCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC------ch-----hhCceEEEECCccccCCCCCCeEEEEEE-
Confidence 9999996 7788999999999999999998665432 11 1356799999999999999998 99998
Q ss_pred cCCchhHHHHHH-HHHHHHhc-cccCCChHHHHHHHHHhCC
Q psy14428 401 TPTSDETERIMS-QLKILIRG-FYSNPPIHGARIVTEILSD 439 (583)
Q Consensus 401 ~p~~~~~~~li~-~l~~~~~~-~~~~~s~~~q~~~~~~l~~ 439 (583)
+ +++++ .+...... ...+.+.+.++++...++.
T Consensus 227 -~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 1gc0_A 227 -S-----QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT 261 (398)
T ss_dssp -C-----HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT
T ss_pred -C-----hHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch
Confidence 6 35555 55554443 3456788888888777764
No 155
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.83 E-value=5.4e-20 Score=191.90 Aligned_cols=186 Identities=11% Similarity=0.053 Sum_probs=136.9
Q ss_pred CChHHHHHHHHHhccCC---CCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh
Q psy14428 182 VLPSVKEAERRIYEKNL---DHEYAN----IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF 254 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~---~~~Y~~----~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~ 254 (583)
+++.+.+++.+.+.+.. ...|.. .....+++++++++++ +++++|++ |+|+++++.++.. .+
T Consensus 12 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~i~~--~~g~~~a~~~~~~---~~ 80 (382)
T 4hvk_A 12 VDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVN------GGGGTVVF--TSGATEANNLAII---GY 80 (382)
T ss_dssp CCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTT------CTTEEEEE--ESSHHHHHHHHHH---HH
T ss_pred CCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCcCeEEE--ECCchHHHHHHHH---Hh
Confidence 56788888777765410 011211 1123367777777664 35788999 9999999998633 33
Q ss_pred C----CCCCEEEEcCCCChhhHHHHhh---cCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCC
Q psy14428 255 Y----PGVKTVYFPTPTWNGHVRFCTD---SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327 (583)
Q Consensus 255 ~----~~gd~Vlv~~P~y~~~~~~~~~---~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~ 327 (583)
. ++||+|++++|+|+.+...+.. .|++++.+|+ ++ ++.+|++.+++.+ .++++++++++||||||.++
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i---~~~~~~v~~~~~~nptG~~~ 155 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPV-GK-YGEVDVSFIDQKL---RDDTILVSVQHANNEIGTIQ 155 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECB-CT-TSCBCHHHHHHHC---CTTEEEEECCSBCTTTCBBC
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEecc-CC-CCCcCHHHHHHHh---ccCceEEEEECCCCCceeeC
Confidence 3 5699999999999988776554 5999999998 54 4678999999887 56789999999999999999
Q ss_pred CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 328 s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+ +++|+++|+++|+ ||+|++|..-... ..+. ..+..+++.|+||.+|.+| +|++++
T Consensus 156 ~---~~~i~~l~~~~~~-li~D~a~~~~~~~------~~~~----~~~~d~~~~s~~K~~g~~g--~g~~~~ 211 (382)
T 4hvk_A 156 P---VEEISEVLAGKAA-LHIDATASVGQIE------VDVE----KIGADMLTISSNDIYGPKG--VGALWI 211 (382)
T ss_dssp C---HHHHHHHHSSSSE-EEEECTTTBTTBC------CCHH----HHTCSEEEEESGGGTSCTT--CEEEEE
T ss_pred C---HHHHHHHHHHcCE-EEEEhHHhcCCCC------CCch----hcCCCEEEEeHHHhcCCCc--eEEEEE
Confidence 8 4577888999999 9999998642221 1121 1245689999999887666 788887
No 156
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.83 E-value=5e-20 Score=201.32 Aligned_cols=255 Identities=11% Similarity=0.005 Sum_probs=178.7
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCe--EEEecCCchhHHHHHHHHHHHhCCCC---
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRL--AIVQGISGSGSLRVGTAFLERFYPGV--- 258 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I--~i~~t~G~~~al~l~~~~l~~~~~~g--- 258 (583)
+.+.+++......+ ...|....+..++++++++++.+..|.+.+++++ ++ |+|+++|+.++...+ ..+|
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~--t~ggt~a~~~al~a~---~~~g~~~ 187 (514)
T 3mad_A 114 AFLNEVYALQSQSN-PLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTV--TSGGTESLLLAMKTY---RDWARAT 187 (514)
T ss_dssp HHHHHHHHHHTTCC-TTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEE--ESSHHHHHHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHhhcC-CcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEE--cCcHHHHHHHHHHHH---HHHhhhh
Confidence 34555554443322 4456666778889999989988888887777888 88 999999999864433 2234
Q ss_pred -----CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q psy14428 259 -----KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWR 333 (583)
Q Consensus 259 -----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~ 333 (583)
|+|+++.|+|..+...++..|++++.+|+ ++ ++.+|++.+++++ .++++++++++||||||.+.+ ++
T Consensus 188 ~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~-~~-~~~~d~~~Le~~i---~~~~~~v~~~~~~nptG~~~~---l~ 259 (514)
T 3mad_A 188 KGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPL-DA-DYRADVAAMREAI---TPNTVVVAGSAPGYPHGVVDP---IP 259 (514)
T ss_dssp HCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECB-CT-TSCBCHHHHHHHC---CTTEEEEEEETTCTTTCCCCC---HH
T ss_pred cCCCCCeEEEeCccchHHHHHHHHcCCeeEEeee-CC-CCCCCHHHHHHHh---ccCCEEEEEeCCCCCCccccC---HH
Confidence 89999999999999999999999999999 55 5789999999988 567899999999999999988 56
Q ss_pred HHHHHHHhcCeEEEEeccCCCCCCCC---CCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHH
Q psy14428 334 QLAVVVKQRHLYPFFDMAYLGLTSGD---FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERI 410 (583)
Q Consensus 334 ~l~~~a~~~~i~iI~De~Y~~l~~~~---~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~l 410 (583)
+|.++|+++|++||+||+|.++.+.. ...+.+++. ....+..+++.|++|.++ .|.++|++++ ++ +.
T Consensus 260 ~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~--~~~~g~d~~~~s~~K~l~-~~~~~g~~~~--~~-----~~ 329 (514)
T 3mad_A 260 EIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD--FRLEGVTSVSADTHKYGY-GAKGTSVILY--RR-----PD 329 (514)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS--TTSTTCCEEEECTTTTTC-CCSSCEEEEE--SS-----HH
T ss_pred HHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc--ccCCCCcEEEECchhccC-CCCCeEEEEE--eC-----HH
Confidence 78888999999999999999886410 000000010 012245688899999875 7899999999 64 22
Q ss_pred HHHHHHHHhcc-----------ccCC---ChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh
Q psy14428 411 MSQLKILIRGF-----------YSNP---PIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG 462 (583)
Q Consensus 411 i~~l~~~~~~~-----------~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~ 462 (583)
+.......... ..+. +.+.++++...+....+++..++.++..+.+.+.++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 395 (514)
T 3mad_A 330 LLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA 395 (514)
T ss_dssp HHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22211110000 0011 2345666666676666666666666655555555543
No 157
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.83 E-value=8.3e-20 Score=196.25 Aligned_cols=293 Identities=11% Similarity=0.011 Sum_probs=182.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..+.+....|. .++.+.+++.+.++.. .+.+..+..++++++++++.+..+. ..+ |++ |+||
T Consensus 47 ~g~~~lD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~---~~~~~~~~~~~~~~la~~l~~~~~~--~~~-v~~--~~gg 116 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSGY--GRKELAEAAYKQLQTL---SYFPMSQSHEPAIKLAEKLNEWLGG--EYV-IFF--SNSG 116 (452)
T ss_dssp TCCEEEETTHHHHTCTTCB--CCHHHHHHHHHHHTTC---CCCCTTSEEHHHHHHHHHHHHHHTS--CEE-EEE--ESSH
T ss_pred CCCEEEECCcchhhccCCC--CCHHHHHHHHHHHHhc---CCcccccCCHHHHHHHHHHHHhCCC--Cce-EEE--eCch
Confidence 3456799998877666664 3578888888777542 1123334455566666655544332 234 999 9999
Q ss_pred hhHHHHHHHHHHHh---C--CCCCEEEEcCCCChhhHHHHhhcCCe-------------EEEEecccCCCCCC-C-----
Q psy14428 241 SGSLRVGTAFLERF---Y--PGVKTVYFPTPTWNGHVRFCTDSRLN-------------VGAYRYFDNKTNGL-D----- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~---~--~~gd~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~d~~~~g~-d----- 296 (583)
++|+..+..++... . +++|.|++.+|+|..+.......+.. +..++..+...... |
T Consensus 117 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (452)
T 3n5m_A 117 SEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIY 196 (452)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGG
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhH
Confidence 99999975444321 2 15899999999998876554444322 33333211000001 1
Q ss_pred ----hhhHHHHHH-cCCCCcEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 297 ----FAGMMEDIK-AMPERSILFLQTSS-HNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 297 ----~~~l~~~l~-~~~~~~~~i~i~~p-~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
++.+++.+. ...+++++++++.+ || ||.++ +++.+++|.++|++||+++|+||+|.+|...+. ....
T Consensus 197 ~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~---~~~~-- 270 (452)
T 3n5m_A 197 DVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGK---AFGF-- 270 (452)
T ss_dssp GCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGG--
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccc---cchh--
Confidence 788888885 22345677777777 89 99766 888999999999999999999999999876541 1111
Q ss_pred HHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHH---H---HhccccCCChHHHHHHHHHhCC---
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKI---L---IRGFYSNPPIHGARIVTEILSD--- 439 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~---~---~~~~~~~~s~~~q~~~~~~l~~--- 439 (583)
+..+....+.+|||.++. | +|+||+++ + +++++.+.. . .....++.++++|.++...++.
T Consensus 271 --~~~~~~~di~t~sK~l~~-G~~~ig~~~~--~-----~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 340 (452)
T 3n5m_A 271 --MNYDVKPDIITMAKGITS-AYLPLSATAV--K-----REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN 340 (452)
T ss_dssp --GGTTCCCSEEEECGGGGT-TSSCCEEEEE--E-----HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH
T ss_pred --hhcCCCCCEEeecccccC-CCcceEEEEE--C-----HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 112222234479999985 9 99999999 6 578887743 1 1234567899999998887762
Q ss_pred hhhhhhhhhHH-HHHHHHHHHHhh--ccCCCccchhhHHHHhc
Q psy14428 440 PKLKAQCDETE-RIMSQLKILIRG--FYSNPPIHGARIVTEIL 479 (583)
Q Consensus 440 ~~~~~~~~~~~-~~~~~l~~~~r~--~~~~~p~~g~~i~~~~l 479 (583)
+.+.++..+.. ...+.++.+... .....+..|.++++.+.
T Consensus 341 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~ 383 (452)
T 3n5m_A 341 ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELV 383 (452)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEe
Confidence 22222222222 222333333221 12234566777776553
No 158
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.83 E-value=1.3e-19 Score=186.28 Aligned_cols=185 Identities=11% Similarity=0.049 Sum_probs=145.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEEEE
Q psy14428 210 KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAY 285 (583)
Q Consensus 210 ~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v 285 (583)
+||+++|++++. ++.|++ ++| ++|+.++ +..+..+||+|++++|+|..+...+ +..|++++.+
T Consensus 2 ~l~~~la~~~g~-------~~~i~~--~sG-~~a~~~~---~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 68 (331)
T 1pff_A 2 ALEGKIAKLEHA-------EACAAT--ASG-MGAIAAS---VWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFI 68 (331)
T ss_dssp HHHHHHHHHHTC-------SEEEEE--SSH-HHHHHHH---HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred hHHHHHHHHhCC-------CeEEEe--CCh-HHHHHHH---HHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEe
Confidence 689999999863 255665 666 8999885 4445667999999999999987765 4479999888
Q ss_pred ecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCeEEEEeccCCCCCCCCCCCch
Q psy14428 286 RYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ-RHLYPFFDMAYLGLTSGDFDKDA 364 (583)
Q Consensus 286 ~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~-~~i~iI~De~Y~~l~~~~~~~~~ 364 (583)
+. .|++.+++.+ .++++++++++||||||.+++ +++|.++|++ +|+++|+||+|....+..
T Consensus 69 ~~-------~d~~~l~~~i---~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~----- 130 (331)
T 1pff_A 69 DM-------AVPGNIEKHL---KPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----- 130 (331)
T ss_dssp CT-------TSTTHHHHTC---CTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC-----
T ss_pred CC-------CCHHHHHHhh---cCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC-----
Confidence 76 1667777766 567899999999999999997 7788999999 999999999998654321
Q ss_pred HHHHHHHHhcCcEEEEecCcccccccCcc-ceEEEEEcCCchhHH-HHHHHHHHHHhc-cccCCChHHHHHHHHHhC
Q psy14428 365 FSLRYFAKEVGQLCLAQSFSKNMGLYGER-VGTFSVLTPTSDETE-RIMSQLKILIRG-FYSNPPIHGARIVTEILS 438 (583)
Q Consensus 365 ~~~~~~~~~~~~vi~i~S~SK~~~l~GlR-iG~lv~~~p~~~~~~-~li~~l~~~~~~-~~~~~s~~~q~~~~~~l~ 438 (583)
++ ..+..+++.|+||.++.||.| +||+++ + + ++++++...... ...+.+.+.|.++...++
T Consensus 131 -~~-----~~~~d~~~~s~~K~~~~~~~r~~G~~~~--~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 194 (331)
T 1pff_A 131 -PL-----DLGVDIVVHSATKYINGHTDVVAGLVCS--R-----ADIIAKVKSQGIKDITGAIISPHDAWLITRGTL 194 (331)
T ss_dssp -GG-----GGTCSEEEEETTTTTSSSSSCCCEEEEE--C-----HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH
T ss_pred -hh-----hcCCcEEEEECccccCCCCCceEEEEEe--C-----cHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc
Confidence 11 235789999999999999999 799999 6 4 788888876655 455778888887666554
No 159
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.83 E-value=8.9e-20 Score=192.53 Aligned_cols=191 Identities=16% Similarity=0.143 Sum_probs=146.4
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH----HHhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR----FCTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G 279 (583)
+..+..+||+++|++++.. +.|++ ++ |++|+.++ +. +..+||+|++++|+|..... .++..|
T Consensus 53 ~~~~~~~lr~~la~~~g~~-------~~i~~--~s-Gt~a~~~a---l~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G 118 (393)
T 1n8p_A 53 QNPNRENLERAVAALENAQ-------YGLAF--SS-GSATTATI---LQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHG 118 (393)
T ss_dssp CCHHHHHHHHHHHHHTTCS-------EEEEE--SC-HHHHHHHH---HH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTC
T ss_pred CChhHHHHHHHHHHHhCCC-------cEEEE--CC-hHHHHHHH---HH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcC
Confidence 3456789999999998531 34444 55 48999985 44 66779999999999985544 456679
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc----CeEEEEeccCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQR----HLYPFFDMAYLGL 355 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~----~i~iI~De~Y~~l 355 (583)
++++.+|+ + | +.+++.+ .++++++++++||||||.+++ +++|.++|+++ |+++|+||+|..+
T Consensus 119 ~~v~~v~~-~------d-~~l~~~i---~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~ 184 (393)
T 1n8p_A 119 VETSFTND-L------L-NDLPQLI---KENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSP 184 (393)
T ss_dssp SCCEEESS-H------H-HHHHHHS---CSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHH
T ss_pred cEEEEeCC-C------h-HHHHHhc---ccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCcccc
Confidence 99998887 2 5 6777766 567899999999999999997 67778889999 9999999999877
Q ss_pred CCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccc-eEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHH
Q psy14428 356 TSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERV-GTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVT 434 (583)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRi-G~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~ 434 (583)
.+.. + . ..+..+++.|+||.+|.+|+|+ ||+++ .+ +++++.+...........+...+.++.
T Consensus 185 ~~~~----~------~-~~~~di~~~S~sK~~g~~G~rigG~~~~--~~----~~~~~~l~~~~~~~g~~~~~~~~~~~~ 247 (393)
T 1n8p_A 185 YISN----P------L-NFGADIVVHSATKYINGHSDVVLGVLAT--NN----KPLYERLQFLQNAIGAIPSPFDAWLTH 247 (393)
T ss_dssp HHCC----G------G-GGTCSEEEEETTTTTTCSSCCCCEEEEE--SC----HHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred ccCC----H------H-HcCCeEEEEECcccccCCCCceeEEEEe--CC----HHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 6532 1 1 1256799999999999999999 99988 54 368888877655445556777777666
Q ss_pred HHhCC
Q psy14428 435 EILSD 439 (583)
Q Consensus 435 ~~l~~ 439 (583)
..++.
T Consensus 248 ~~l~~ 252 (393)
T 1n8p_A 248 RGLKT 252 (393)
T ss_dssp HHHTT
T ss_pred hccch
Confidence 66654
No 160
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.83 E-value=1.4e-19 Score=193.17 Aligned_cols=287 Identities=15% Similarity=0.055 Sum_probs=181.0
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..+.+....|. .++.+.+++.+.+..... .|.+.....+|++++++++. .+++|++ |+||
T Consensus 51 ~g~~ylD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~-------~~~~v~~--~~~G 118 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGH--ANDRVVEALKAVAERGTS-FGAPTEIENKLAKLVIERVP-------SIEIVRM--VNSG 118 (429)
T ss_dssp TCCEEEESCGGGTTCTTCB--SCHHHHHHHHHHHHHCSC-CSSCCHHHHHHHHHHHHHST-------TCSEEEE--ESSH
T ss_pred CCCEEEECCCChhhcccCC--CCHHHHHHHHHHHhhCcC-cCCCCHHHHHHHHHHHHhCC-------CCCEEEE--eCCh
Confidence 4567899998887666664 357888888777655322 34466677889999988763 3589999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhh-cCCeEEEEecccCCCCCC--------------ChhhHHHHHH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SRLNVGAYRYFDNKTNGL--------------DFAGMMEDIK 305 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~~~~~v~~~d~~~~g~--------------d~~~l~~~l~ 305 (583)
++|+..+..++... .+++.|++.+|+|..+...... .|..+..++. ... .++ |++.+++.++
T Consensus 119 sea~~~ai~~a~~~-~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~ 195 (429)
T 3k28_A 119 TEATMSALRLARGY-TGRNKILKFIGCYHGHGDSLLIKAGSGVATLGL-PDS-PGVPEGVAKNTITVAYNDLESVKYAFE 195 (429)
T ss_dssp HHHHHHHHHHHHHH-HTCCEEEEEETCCCCSCGGGCSSCCTTC------CCC-TTCCHHHHTTEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-hCCCEEEEECCCcCCCcHHHHHhcCCcccccCC-CCc-CCCCCcccCceeecCCCCHHHHHHHHH
Confidence 99999875443322 2378999999999765433222 2221111111 000 111 7888888886
Q ss_pred cCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 306 AMPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
+..+++.++++..++|++|.+ .+++.+++|.++|++||+++|+||+|.+| ..+ ....... .+ ....+.|||
T Consensus 196 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g---~~~~~~~-~~---~~~di~t~s 267 (429)
T 3k28_A 196 QFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVA---YNCGQGY-YG---VTPDLTCLG 267 (429)
T ss_dssp HHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSS---TTHHHHH-HT---CCCSEEEEC
T ss_pred hCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC---cchHHHH-hC---CCCceehhh
Confidence 433345555544444445544 46888999999999999999999999998 543 1222222 12 222345899
Q ss_pred ccccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHH----HHH
Q psy14428 385 KNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMS----QLK 457 (583)
Q Consensus 385 K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~----~l~ 457 (583)
|.++ .|+|+||+++ + +++++.+.... ....++.++++|.++...++... ++.+++.++..+ .++
T Consensus 268 K~~~-~G~~iG~~~~--~-----~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~ 338 (429)
T 3k28_A 268 KVIG-GGLPVGAYGG--K-----AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLR 338 (429)
T ss_dssp GGGG-TTSCCEEEEE--C-----HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHH
T ss_pred hhhc-CCCCeEEEEE--c-----HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9998 6999999999 6 57888776532 22346788999999988887432 333333333322 333
Q ss_pred HHHh--hccCCCccchhhHHHHhc
Q psy14428 458 ILIR--GFYSNPPIHGARIVTEIL 479 (583)
Q Consensus 458 ~~~r--~~~~~~p~~g~~i~~~~l 479 (583)
++.. ......+..|.++++.+.
T Consensus 339 ~~~~~~~~~~~~~~~g~~~~~~~~ 362 (429)
T 3k28_A 339 KAAEKHGIPHHINRAGSMIGIFFT 362 (429)
T ss_dssp HHHHHTTCCCEEEEETTEEEEESS
T ss_pred HHHhhCCCCEEEEeeccEEEEEEe
Confidence 3221 122244556777766553
No 161
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.83 E-value=4.2e-20 Score=198.37 Aligned_cols=295 Identities=10% Similarity=0.003 Sum_probs=178.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..+.+....|. .++.+.+++.+.++.. ..|.+..+..++++++++++.+..+ ...++|++ |+||
T Consensus 42 ~g~~ylD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~sG 113 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGH--RKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFY--SDSG 113 (448)
T ss_dssp TSCEEEETTHHHHTCSSCB--SCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEE--ESSH
T ss_pred CCCEEEECCcchhhccCCC--CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCch
Confidence 3456789988877666664 3578888888777542 2344556667788888888876543 34579999 9999
Q ss_pred hhHHHHHHHHHHHh-C-CC---CCEEEEcCCCChhhHHHHhhcCC-------------eEEEEecccCCCCCC-------
Q psy14428 241 SGSLRVGTAFLERF-Y-PG---VKTVYFPTPTWNGHVRFCTDSRL-------------NVGAYRYFDNKTNGL------- 295 (583)
Q Consensus 241 ~~al~l~~~~l~~~-~-~~---gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~d~~~~g~------- 295 (583)
++|+..+..++... . .. +|.|++++|+|..+.......+. .+..+|.. +.+..
T Consensus 114 seA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 191 (448)
T 3dod_A 114 AEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDE 191 (448)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhh
Confidence 99999975444321 0 21 49999999999877544333322 22334431 11111
Q ss_pred ----ChhhHHHHHHcCCCCcEEEEeCCCC-CCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 296 ----DFAGMMEDIKAMPERSILFLQTSSH-NPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 296 ----d~~~l~~~l~~~~~~~~~i~i~~p~-NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
|++.+++.++...++++++++...+ ||+| .+++++.+++|.++|++||++||+||+|.+|...+. .. ..
T Consensus 192 ~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~~-a~-- 266 (448)
T 3dod_A 192 CRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGK--MF-AC-- 266 (448)
T ss_dssp HHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SS-GG--
T ss_pred hhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc--hh-hh--
Confidence 3677888875323445555555555 7777 556888899999999999999999999999876541 11 11
Q ss_pred HHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHH-------HHhccccCCChHHHHHHHHHhCChh
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKI-------LIRGFYSNPPIHGARIVTEILSDPK 441 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~-------~~~~~~~~~s~~~q~~~~~~l~~~~ 441 (583)
+..+....+.+|||.++ .| +|+||+++ + +++++.+.+ ......++.++++|.++...++.-.
T Consensus 267 --~~~~~~~di~t~sK~l~-~G~~~ig~v~~--~-----~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 336 (448)
T 3dod_A 267 --EHENVQPDLMAAGKGIT-GGYLPIAVTFA--T-----EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFE 336 (448)
T ss_dssp --GGGTCCCSEEEECGGGG-TTSSCCEEEEE--E-----HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred --hhcCCCCCEEEeccccc-CCcCceEEEEE--C-----HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHh
Confidence 11122222447899998 59 59999999 6 578888765 3344566788999999888876311
Q ss_pred hhhhhhhHHHHHHHHHHHHhh-----ccCCCccchhhHHHHhcC
Q psy14428 442 LKAQCDETERIMSQLKILIRG-----FYSNPPIHGARIVTEILS 480 (583)
Q Consensus 442 ~~~~~~~~~~~~~~l~~~~r~-----~~~~~p~~g~~i~~~~l~ 480 (583)
-+..+++.++..+.+++.++. .....+..|.++++.+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~~ 380 (448)
T 3dod_A 337 SENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVR 380 (448)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECS
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEcc
Confidence 122222333333333322222 112334467777766654
No 162
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.83 E-value=6.8e-20 Score=199.36 Aligned_cols=259 Identities=11% Similarity=0.067 Sum_probs=181.7
Q ss_pred hHHHHHHHHHhcc---CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh--CCCC
Q psy14428 184 PSVKEAERRIYEK---NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF--YPGV 258 (583)
Q Consensus 184 ~~v~~a~~~~~~~---~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~--~~~g 258 (583)
+.+.+++.+.... ....+|....|..++++.+++++.+.+|.+.+++++++ |+|+++|+.++...+... ..+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~--~~ggt~a~~~a~~a~~~~~~~~~g 155 (497)
T 3mc6_A 78 DDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTT--TSGGTESLLLACLSAKMYALHHRG 155 (497)
T ss_dssp HHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEE--ESSHHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEE--cCcHHHHHHHHHHHHHHHHHhcCC
Confidence 5566665555543 12455777788899999999999888888777889999 999999999874433221 0124
Q ss_pred ---CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q psy14428 259 ---KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQL 335 (583)
Q Consensus 259 ---d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l 335 (583)
|+|+++.|+|..+...++..|++++.+|+ +++++.+|++.+++.+ .++++++++++|+||||.+.+ +++|
T Consensus 156 ~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i---~~~~~~v~~~~p~nptG~~~~---l~~i 228 (497)
T 3mc6_A 156 ITEPEIIAPVTAHAGFDKAAYYFGMKLRHVEL-DPTTYQVDLGKVKKFI---NKNTVLLVGSAPNFPHGIADD---IEGL 228 (497)
T ss_dssp CSSCEEEEETTSCHHHHHHHHHSCCEEEEECB-CTTTCSBCTTTTGGGC---CSSEEEEEEETTCTTTCCCCS---CTTT
T ss_pred CCCceEEEeCCccHHHHHHHHHcCCeEEEEec-CcccCcCCHHHHHHHH---hhCCEEEEEECCCCCCCcCCC---HHHH
Confidence 89999999999999999999999999998 5545789999998877 567899999999999999977 5577
Q ss_pred HHHHHhcCeEEEEeccCCCCCCC-----CCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHH
Q psy14428 336 AVVVKQRHLYPFFDMAYLGLTSG-----DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERI 410 (583)
Q Consensus 336 ~~~a~~~~i~iI~De~Y~~l~~~-----~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~l 410 (583)
.++|+++|+++|+|++|..+... +. ...+++. ....+-.+++.|++|.++ .|.++||+++ ++ +.
T Consensus 229 ~~la~~~g~~livD~a~~~~~~~f~~~~~~-~~~~~~~--~~~~g~d~~~~s~~K~l~-~~~~~g~~~~--~~-----~~ 297 (497)
T 3mc6_A 229 GKIAQKYKLPLHVDSCLGSFIVSFMEKAGY-KNLPLLD--FRVPGVTSISCDTHKYGF-APKGSSVIMY--RN-----SD 297 (497)
T ss_dssp TTHHHHTTCCEEEETTTTHHHHGGGTTTTC-CSCCCCS--TTSTTCCEEEEETTTTTC-CCSSCEEEEC--SS-----HH
T ss_pred HHHHHHhCCEEEEECcchhhhhhhhhhhcc-cCCcccc--ccCCCCcEEEECchhhcC-CCCCceeEEe--cC-----HH
Confidence 88899999999999999854211 00 0000010 012234578889999874 8899999998 64 33
Q ss_pred HHHHHHHHhccccCC-----C---------hHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhh
Q psy14428 411 MSQLKILIRGFYSNP-----P---------IHGARIVTEILSDPKLKAQCDETERIMSQLKILIRG 462 (583)
Q Consensus 411 i~~l~~~~~~~~~~~-----s---------~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~ 462 (583)
+..........+.+. + .++++++...+.+..+++..++..+....+.+.++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 363 (497)
T 3mc6_A 298 LRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQE 363 (497)
T ss_dssp HHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332221111111111 1 556888888887776776666666555555554443
No 163
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.83 E-value=4.3e-19 Score=191.97 Aligned_cols=299 Identities=11% Similarity=0.079 Sum_probs=194.3
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|. .++.+.+++.+.++.. .+ |....+..++++++++++.+..+ ...++|++ ++||
T Consensus 52 ~G~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~-~~-~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~sG 123 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGY--GRREIVDAMAHQAMVL-PY-ASPWYMATSPAARLAEKIATLTP--GDLNRIFF--TTGG 123 (476)
T ss_dssp TCCEEEETTHHHHTCTTCB--CCHHHHHHHHHHHHHC-CC-CCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEE--ESSH
T ss_pred CCCEEEECCCchhhccCCC--CCHHHHHHHHHHHHhc-cC-cccCccCCHHHHHHHHHHHhcCC--CCcCEEEE--eCch
Confidence 4556789998877666664 3578888887776541 12 22225678899999999988764 34579999 9999
Q ss_pred hhHHHHHHHHHHHh-----CCCCCEEEEcCCCChhhHHHHhhcCCe-------------EEEEecc-cCCCCCCC-----
Q psy14428 241 SGSLRVGTAFLERF-----YPGVKTVYFPTPTWNGHVRFCTDSRLN-------------VGAYRYF-DNKTNGLD----- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~-----~~~gd~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~-d~~~~g~d----- 296 (583)
++|++.+..++... .++++.|++.+|+|..+.......+.. +..++.. ....++.+
T Consensus 124 seA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (476)
T 3i5t_A 124 STAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFL 203 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHH
Confidence 99999875544332 033689999999998876555443321 2223220 00001212
Q ss_pred ---hhhHHHHHHcCC-CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH
Q psy14428 297 ---FAGMMEDIKAMP-ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA 371 (583)
Q Consensus 297 ---~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~ 371 (583)
++.+++.+.+.. ++++++++..++|++|. +++++.+++|.++|++||+++|+||+|.+|...+ .........
T Consensus 204 ~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G---~~~~~~~~~ 280 (476)
T 3i5t_A 204 DDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCG---EWFASEKVF 280 (476)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSCHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---Cceeeeccc
Confidence 677877775432 45677877778888885 8899999999999999999999999999987655 122222111
Q ss_pred HhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-------HhccccCCChHHHHHHHHHhCChhhh
Q psy14428 372 KEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-------IRGFYSNPPIHGARIVTEILSDPKLK 443 (583)
Q Consensus 372 ~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~ 443 (583)
+..+.++ +|||.++ .| +|+|++++ + +++++.+... .....++.++++|.++.+.++.-.-+
T Consensus 281 ~v~pdi~---t~sK~l~-~G~~plg~v~~--~-----~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~ 349 (476)
T 3i5t_A 281 GVVPDII---TFAKGVT-SGYVPLGGLAI--S-----EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMERE 349 (476)
T ss_dssp CCCCSEE---EECGGGG-TTSSCCEEEEE--C-----HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred CCCcchh---hhhhhhc-CCCcCeEEEEE--C-----HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhH
Confidence 2223333 6899998 69 99999999 6 5888888753 22345678899999888887621112
Q ss_pred hhhhhHHHHHHHHHHHHhhc-----cCCCccchhhHHHHhcCC
Q psy14428 444 AQCDETERIMSQLKILIRGF-----YSNPPIHGARIVTEILSD 481 (583)
Q Consensus 444 ~~~~~~~~~~~~l~~~~r~~-----~~~~p~~g~~i~~~~l~~ 481 (583)
..+++.++..+.+++.++.. ....+..|.++++.+..+
T Consensus 350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~~i~~~~~ 392 (476)
T 3i5t_A 350 GIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQCLLD 392 (476)
T ss_dssp THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceeEEEEecC
Confidence 22333333333333333321 223345677776666543
No 164
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.82 E-value=2.7e-19 Score=188.27 Aligned_cols=207 Identities=16% Similarity=0.076 Sum_probs=150.9
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA-NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
++.++++.+.+. .++.+.+++.+.+.. ..|. +..+..+||+++|++++.. ++++ ++||+
T Consensus 22 ~~~~~l~~~~p~-------~~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~~~~--------~~i~--~~~gt 81 (391)
T 3dr4_A 22 SDLPRISVAAPR-------LDGNERDYVLECMDT---TWISSVGRFIVEFEKAFADYCGVK--------HAIA--CNNGT 81 (391)
T ss_dssp ------CCCCCC-------CCSSHHHHHHHHHHH---TCCSSCSHHHHHHHHHHHHHHTCS--------EEEE--ESSHH
T ss_pred CCCceeccCCCC-------CCHHHHHHHHHHHHc---CCccCCChHHHHHHHHHHHHhCCC--------cEEE--eCCHH
Confidence 456677777663 346677777766654 2465 7889999999999999642 6677 88889
Q ss_pred hHHHHHHHHHHHh-CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCC
Q psy14428 242 GSLRVGTAFLERF-YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSH 320 (583)
Q Consensus 242 ~al~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~ 320 (583)
+|+.++ +..+ ..+||+|++++|+|..+...++..|++++.+++ +++++++|++.+++.+ .+++++++ |+
T Consensus 82 ~al~~~---l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~---~~~~~~v~---~~ 151 (391)
T 3dr4_A 82 TALHLA---LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDN-DPRTFNLDAAKLEALI---TPRTKAIM---PV 151 (391)
T ss_dssp HHHHHH---HHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCGGGSGGGC---CTTEEEEC---CB
T ss_pred HHHHHH---HHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEec-CccccCcCHHHHHHhc---CCCceEEE---EE
Confidence 999885 4445 667999999999999999999999999999999 6566889999998876 45677776 57
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCC-CCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 321 NPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLT-SGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 321 NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
||||...+ +++|+++|+++|++||+|++|.... +.+ .. . .... -+.+.||||..+++|.|.|++++
T Consensus 152 n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~---~----~~~~-di~~~S~s~~K~l~~g~gg~~~~ 218 (391)
T 3dr4_A 152 HLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRG--KK---S----GSLG-DCATFSFFGNAIITTGEGGMITT 218 (391)
T ss_dssp CGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT--EE---T----TSSS-SEEEEECBTTSSSCCBSCEEEEE
T ss_pred CCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECC--ee---e----cccC-CEEEEECCCCCcCCcCCeEEEEE
Confidence 89999876 5667888999999999999998643 322 11 0 0111 27778877444445678999998
Q ss_pred EcCCchhHHHHHHHHHHHH
Q psy14428 400 LTPTSDETERIMSQLKILI 418 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~ 418 (583)
++ +.+++++....
T Consensus 219 --~~----~~~~~~~~~~~ 231 (391)
T 3dr4_A 219 --ND----DDLAAKMRLLR 231 (391)
T ss_dssp --SC----HHHHHHHHHHH
T ss_pred --CC----HHHHHHHHHHH
Confidence 65 46777776654
No 165
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.82 E-value=1.6e-19 Score=194.42 Aligned_cols=288 Identities=10% Similarity=0.054 Sum_probs=181.6
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLD--HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
..+|+..|.+....|. .++.+.+++.+.+++... ..+.+.....+|++.+++++ + ...++|++ |+||+
T Consensus 76 ~ylD~~s~~~~~~lGh--~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~----~--~~~~~v~~--~~sGs 145 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGH--GHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDIT----P--AGLDTVFF--SDSGS 145 (457)
T ss_dssp EEEETTHHHHTCTTCB--TCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHS----S--TTEEEEEE--ESSHH
T ss_pred EEEECCCcHhhhccCC--CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC----C--CCcCEEEE--eCcHH
Confidence 6789988877666664 357888887776654211 11222333455666666554 2 34579999 99999
Q ss_pred hHHHHHHHHHHHh----C-CCCCEEEEcCCCChhhHHHHhhcC--------------CeEEEEecccCCC-CCCChhhHH
Q psy14428 242 GSLRVGTAFLERF----Y-PGVKTVYFPTPTWNGHVRFCTDSR--------------LNVGAYRYFDNKT-NGLDFAGMM 301 (583)
Q Consensus 242 ~al~l~~~~l~~~----~-~~gd~Vlv~~P~y~~~~~~~~~~G--------------~~~~~v~~~d~~~-~g~d~~~l~ 301 (583)
+|++.+..++... . ++++.|++.+|+|..+.......+ ..+..++. .... ...|++.++
T Consensus 146 eA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~d~~~le 224 (457)
T 3tfu_A 146 VSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQ-VPRDYDPAYSAAFE 224 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECC-CCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecC-CCcccCHHHHHHHH
Confidence 9999875443322 0 334689999999977654443331 12333443 1111 113678888
Q ss_pred HHHHcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 302 EDIKAMPERSILFLQTS-SHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 302 ~~l~~~~~~~~~i~i~~-p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
+.+++..++++++++.. +|||+|.++ +++.+++|.++|+++|+++|+||+|.+|...+. ......+ +...+++
T Consensus 225 ~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~---~~a~~~~-~~~pdii- 299 (457)
T 3tfu_A 225 AQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA---LFAADHA-GVSPDIM- 299 (457)
T ss_dssp HHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSTHHHH-TCCCSEE-
T ss_pred HHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc---hhHhHhc-CCCceEE-
Confidence 88854335677777777 899999876 788899999999999999999999999876541 2222222 2233444
Q ss_pred EecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHH-----HhccccCCChHHHHHHHHHhC---ChhhhhhhhhHH
Q psy14428 380 AQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKIL-----IRGFYSNPPIHGARIVTEILS---DPKLKAQCDETE 450 (583)
Q Consensus 380 i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~-----~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~ 450 (583)
||||.++ .| +|+||+++ + +++++.+... .....++.++++|.++...++ ++.+.++..+
T Consensus 300 --t~sK~l~-gG~~~lG~v~~--~-----~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~-- 367 (457)
T 3tfu_A 300 --CVGKALT-GGYLSLAATLC--T-----ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITE-- 367 (457)
T ss_dssp --EECGGGG-TTSSCCEEEEE--E-----HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHH--
T ss_pred --EEChhhh-CCCcceEEEEE--c-----HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHH--
Confidence 9999887 45 79999999 6 5888888632 223456778898888877765 3333333332
Q ss_pred HHHHHHHHHHhhc-----cCCCccchhhHHHHhcC
Q psy14428 451 RIMSQLKILIRGF-----YSNPPIHGARIVTEILS 480 (583)
Q Consensus 451 ~~~~~l~~~~r~~-----~~~~p~~g~~i~~~~l~ 480 (583)
..+.+++.++.. +...+..|.++++.+..
T Consensus 368 -~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~~ 401 (457)
T 3tfu_A 368 -LAAGLTAGLDTARALPAVTDVRVCGAIGVIECDR 401 (457)
T ss_dssp -HHHHHHHHHGGGGGSTTEEEEEECSSCEEEEESS
T ss_pred -HHHHHHHHHHHHhcCCCeeeeecCCeEEEEEECC
Confidence 222222222221 22334567777776654
No 166
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.82 E-value=5.6e-19 Score=186.33 Aligned_cols=196 Identities=12% Similarity=0.050 Sum_probs=148.8
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCC--CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGG--DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGV 258 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G--~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~g 258 (583)
..+.+.+++.+.+.. +|.+..| ..+||+++|++++. ++|++ |+|+++|+.++ +..+ ..+|
T Consensus 10 ~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~~~---~~~l~~~~g 72 (394)
T 1o69_A 10 MGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSKS--------ENALA--LNSATAALHLA---LRVAGVKQD 72 (394)
T ss_dssp --CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHCC--------SEEEE--ESCHHHHHHHH---HHHTTCCTT
T ss_pred CCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH---HHHcCCCCC
Confidence 445677777766643 3777678 89999999999953 68999 99999999985 4455 6779
Q ss_pred CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 259 KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 259 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
|+|++++|+|..+...++..|++++.+++ + +++.+|++.+++.+.....+++++++++ |||.. +++++|.++
T Consensus 73 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l 144 (394)
T 1o69_A 73 DIVLASSFTFIASVAPICYLKAKPVFIDC-D-ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEI 144 (394)
T ss_dssp CEEEEESSSCGGGTHHHHHTTCEEEEECB-C-TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEEe-C-CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHH
Confidence 99999999999999999999999999998 5 4577899999998864322567777764 89955 457778889
Q ss_pred HHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 339 VKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 339 a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
|+++|++||+||+|. ++.+.+. ... ...+ +.+.||||..+++|.|+||+++ ++ +++++++...
T Consensus 145 ~~~~~~~li~Dea~~~g~~~~~~--~~~-------~~~~-~~~~s~s~~K~l~~~~~G~~~~--~~----~~l~~~l~~~ 208 (394)
T 1o69_A 145 CKENDIVLIEDAAEALGSFYKNK--ALG-------TFGE-FGVYSYNGNKIITTSGGGMLIG--KN----KEKIEKARFY 208 (394)
T ss_dssp HHHTTCEEEEECTTCTTCEETTE--ETT-------SSSS-EEEEECCTTSSSCCSSCEEEEE--SC----HHHHHHHHHH
T ss_pred HHHcCCEEEEECcCcccceeCCc--ccc-------cccC-cEEEEEeCCccCCCCCceEEEE--CC----HHHHHHHHHH
Confidence 999999999999998 5655431 110 1112 5667776555667889999999 65 4678887765
Q ss_pred H
Q psy14428 418 I 418 (583)
Q Consensus 418 ~ 418 (583)
.
T Consensus 209 ~ 209 (394)
T 1o69_A 209 S 209 (394)
T ss_dssp T
T ss_pred H
Confidence 3
No 167
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.82 E-value=1e-18 Score=185.69 Aligned_cols=196 Identities=16% Similarity=0.129 Sum_probs=146.5
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCC----HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGD----AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YP 256 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~----~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~ 256 (583)
+++.+.+++.+.+.......|++..|. .++++.++++++ .. ++++ +++|++|+.++ +..+ ..
T Consensus 14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g----~~----~~i~--~~~gt~al~~~---~~~~~~~ 80 (418)
T 2c81_A 14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNG----VP----YCVP--TTSGSTALMLA---LEALGIG 80 (418)
T ss_dssp CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHT----CS----EEEE--ESCHHHHHHHH---HHHTTCC
T ss_pred CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhC----CC----cEEE--eCCHHHHHHHH---HHHcCCC
Confidence 457888888887765422348878884 556666666653 32 3455 56668999885 4455 67
Q ss_pred CCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q psy14428 257 GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336 (583)
Q Consensus 257 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~ 336 (583)
+||+|++++|+|..+...++..|++++.+++ +++++++|++.+++.+ .+++++++++ ||||... ++++|.
T Consensus 81 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i---~~~~~~v~~~---~~~G~~~---~~~~i~ 150 (418)
T 2c81_A 81 EGDEVIVPSLTWIATATAVLNVNALPVFVDV-EADTYCIDPQLIKSAI---TDKTKAIIPV---HLFGSMA---NMDEIN 150 (418)
T ss_dssp TTCEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHGGGC---CTTEEEECCB---CCTTCCC---CHHHHH
T ss_pred CcCEEEECCCccHhHHHHHHHcCCEEEEEec-CCCCCCcCHHHHHHhh---CCCCeEEEEe---CCcCCcc---cHHHHH
Confidence 7999999999999999999999999999998 5546789999988776 4567877754 5899864 577888
Q ss_pred HHHHhcCeEEEEeccCCCCC-CCCCCCchHHHHHHHHhcCcEEEEecC--cccccccCccceEEEEEcCCchhHHHHHHH
Q psy14428 337 VVVKQRHLYPFFDMAYLGLT-SGDFDKDAFSLRYFAKEVGQLCLAQSF--SKNMGLYGERVGTFSVLTPTSDETERIMSQ 413 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y~~l~-~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~l~GlRiG~lv~~~p~~~~~~~li~~ 413 (583)
++|+++|++||+||+|..+. +++ .. +.. .+ .+.+.|| ||.++. | |+||+++ ++ ++++++
T Consensus 151 ~~~~~~~~~li~D~a~~~~~~~~~--~~---~~~----~~-~~~~~s~s~~K~~~~-g-~~g~~~~--~~----~~l~~~ 212 (418)
T 2c81_A 151 EIAQEHNLFVIEDCAQSHGSVWNN--QR---AGT----IG-DIGAFSCQQGKVLTA-G-EGGIIVT--KN----PRLFEL 212 (418)
T ss_dssp HHHHHTTCEEEEECTTCTTCEETT--EE---TTS----SS-SEEEEECCTTSSSCS-S-SCEEEEE--SC----HHHHHH
T ss_pred HHHHHCCCEEEEECcccccCccCC--Ee---ccc----cc-ceEEEeccCCcccCC-C-CeEEEEE--CC----HHHHHH
Confidence 99999999999999999987 543 11 111 11 2777888 999995 8 9999998 65 467777
Q ss_pred HHHHH
Q psy14428 414 LKILI 418 (583)
Q Consensus 414 l~~~~ 418 (583)
+....
T Consensus 213 ~~~~~ 217 (418)
T 2c81_A 213 IQQLR 217 (418)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 168
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.82 E-value=8.7e-19 Score=187.20 Aligned_cols=283 Identities=11% Similarity=0.006 Sum_probs=177.1
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...+|++.+.+....|. .++.+.+++.+.+.......| +..-..+|++.+++++. .+++|++ |+|++
T Consensus 55 g~~~lD~~~~~~~~~lG~--~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~-------~~~~v~~--~~sgs 122 (434)
T 2epj_A 55 GARIVDLVLAYGPLILGH--KHPRVLEAVEEALARGWLYGA-PGEAEVLLAEKILGYVK-------RGGMIRF--VNSGT 122 (434)
T ss_dssp CCEEEESSGGGTTCTTCB--TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHHC-------TTCEEEE--ESSHH
T ss_pred CCEEEEcccchhcccCCC--CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCC-------CCCEEEE--eCCHH
Confidence 445789998887554453 457888888877765322233 22223456666665542 3689999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh--------------hcCC------eEEEEecccCCCCCCChhhHH
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT--------------DSRL------NVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~--------------~~G~------~~~~v~~~d~~~~g~d~~~l~ 301 (583)
+|+.++..+.+.+.+ ++.|++.+|+|..+...+. ..|+ +++.+|. .|++.++
T Consensus 123 eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le 194 (434)
T 2epj_A 123 EATMTAIRLARGYTG-RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALE 194 (434)
T ss_dssp HHHHHHHHHHHHHHC-CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHH
T ss_pred HHHHHHHHHHHHhhC-CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHH
Confidence 999987544333555 6789999999987543221 1233 3555554 1788898
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEE
Q psy14428 302 EDIKAMPERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLA 380 (583)
Q Consensus 302 ~~l~~~~~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i 380 (583)
+.+++..++++++++...+||||.++ +++.+++|.++|++||++||+||+|.+|.. + .......+ +.... +
T Consensus 195 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~-g---~~~~~~~~-~~~~d---i 266 (434)
T 2epj_A 195 RVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRL-G---LEGAQGYF-NIEGD---I 266 (434)
T ss_dssp HHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTS-S---TTHHHHHH-TCCCS---E
T ss_pred HHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeC-C---cchhhHHh-CCCCC---e
Confidence 88854223455555544456799866 799999999999999999999999998843 2 11122221 22223 4
Q ss_pred ecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHhC---ChhhhhhhhhHH-HHH
Q psy14428 381 QSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEILS---DPKLKAQCDETE-RIM 453 (583)
Q Consensus 381 ~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~-~~~ 453 (583)
.||||.++ .|+|+||+++ + +++++.+.... ....++.++++|.++...++ ++.+.++..+.. .+.
T Consensus 267 ~s~sK~l~-~G~~~G~v~~--~-----~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~ 338 (434)
T 2epj_A 267 IVLGKIIG-GGFPVGAVAG--S-----REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALE 338 (434)
T ss_dssp EEEEGGGG-TTSSCEEEEE--C-----HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred eeecchhc-CCcceeeeee--c-----HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 59999999 4999999999 6 57777765421 12344678888888776664 223333333332 223
Q ss_pred HHHHHHHh-hccC-CCccchhhHHHHhcC
Q psy14428 454 SQLKILIR-GFYS-NPPIHGARIVTEILS 480 (583)
Q Consensus 454 ~~l~~~~r-~~~~-~~p~~g~~i~~~~l~ 480 (583)
+.++.+.. ..+. ..+..|.++|+.+..
T Consensus 339 ~~L~~~~~~~~~~~~~~~~g~~~~i~~~~ 367 (434)
T 2epj_A 339 EAASEVLDRTGLPYTINRVESMMQLFIGV 367 (434)
T ss_dssp HHHHHHHHHHTCCEEEEEETTEEEEEETC
T ss_pred HHHHHHHhhCCCcEEEEEeeeEEEEEEeC
Confidence 33333321 1222 235567787776654
No 169
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.82 E-value=7.1e-19 Score=187.33 Aligned_cols=281 Identities=14% Similarity=0.045 Sum_probs=177.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
+...+|+..|.+....|. +++.+.+++.+.++......| ..++++++++.+.+..+ .+++|++ |+|++
T Consensus 51 g~~~iD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~--~~~g~ 118 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGH--AHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP---FVDLVRF--VNSGT 118 (424)
T ss_dssp CCEEEESSGGGTTCTTCB--TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT---TCCEEEE--ESSHH
T ss_pred CCEEEEccccccccccCC--CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCEEEE--eCCHH
Confidence 445689998887655553 457888888877765322222 34455555555554332 4689999 99999
Q ss_pred hHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-h-------------cCC------eEEEEecccCCCCCCChhhHH
Q psy14428 242 GSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-D-------------SRL------NVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~-------------~G~------~~~~v~~~d~~~~g~d~~~l~ 301 (583)
+|+..+..+.+.+.+ ++.|++.+|+|..+...+. . .|+ +++.+|. .|++.++
T Consensus 119 ea~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le 190 (424)
T 2e7u_A 119 EATMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLR 190 (424)
T ss_dssp HHHHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHH
T ss_pred HHHHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHH
Confidence 999987544333555 5889999999987644221 1 132 3444443 1788888
Q ss_pred HHHHcCCCCcEEEEeCCCCCC-CCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEE
Q psy14428 302 EDIKAMPERSILFLQTSSHNP-TGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCL 379 (583)
Q Consensus 302 ~~l~~~~~~~~~i~i~~p~NP-TG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~ 379 (583)
+.+++..++ ..+++++|+|| ||.++ +++.+++|.++ ++||++||+||+|.+|..+. ...... .+....+
T Consensus 191 ~~l~~~~~~-~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~----~~~~~~-~~~~~di-- 261 (424)
T 2e7u_A 191 EVLKRRGEE-IAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAF----GGATEL-LGLKPDL-- 261 (424)
T ss_dssp HHHHHHGGG-EEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSST----THHHHH-HTCCCSE--
T ss_pred HHHHhCCCC-EEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccch----hHHHHH-hCCCcch--
Confidence 888532123 34555678776 89755 79999999999 99999999999999984321 122222 1222333
Q ss_pred EecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHhC---C-hhhhhhhhhHHH-
Q psy14428 380 AQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEILS---D-PKLKAQCDETER- 451 (583)
Q Consensus 380 i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l~---~-~~~~~~~~~~~~- 451 (583)
.||||.++ +|+|+||+++ + +++++.+.... ....++.++++|.++...++ + +.+.++..+...
T Consensus 262 -~s~sK~l~-~G~~~G~~~~--~-----~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~ 332 (424)
T 2e7u_A 262 -VTLGKILG-GGLPAAAYAG--R-----REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGAR 332 (424)
T ss_dssp -EEECGGGG-TTSSCEEEEE--C-----HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred -hhhhhhhh-CCcceEEEEE--c-----HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 49999999 6999999999 7 57777776522 12244678888888877664 2 333333333332
Q ss_pred HHHHHHHHHhh-cc-CCCccchhhHHHHhcC
Q psy14428 452 IMSQLKILIRG-FY-SNPPIHGARIVTEILS 480 (583)
Q Consensus 452 ~~~~l~~~~r~-~~-~~~p~~g~~i~~~~l~ 480 (583)
+.+.++.+... .+ ...+..|.++|+.+..
T Consensus 333 l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~ 363 (424)
T 2e7u_A 333 LEAGLKEVLKEKGLPHTVNRVGSMITVFFTE 363 (424)
T ss_dssp HHHHHHHHHHHTTCCCEEEEETTEEEEESSS
T ss_pred HHHHHHHHHHhCCCceEEEeeceEEEEEEeC
Confidence 22333333211 22 2245677888877653
No 170
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.82 E-value=9.5e-20 Score=191.94 Aligned_cols=186 Identities=15% Similarity=0.043 Sum_probs=135.7
Q ss_pred CChHHHHHHHHHhccC---CCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh
Q psy14428 182 VLPSVKEAERRIYEKN---LDHEYAN----IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF 254 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~---~~~~Y~~----~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~ 254 (583)
+++.+.+++.+.+... ....|.. .....++|++++++++ +++++|++ |+|+++|+.++ +..+
T Consensus 32 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~v~~--~~g~t~al~~~---~~~l 100 (400)
T 3vax_A 32 VDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVS------AEPDELIF--TSGATESNNIA---LLGL 100 (400)
T ss_dssp SCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTT------CCGGGEEE--ESCHHHHHHHH---HHTT
T ss_pred CCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcC------CCCCcEEE--eCCHHHHHHHH---HHHH
Confidence 4577777776665421 0111211 2234667777777664 35789999 99999999986 3334
Q ss_pred C----CCCC-EEEEcCCCChhhHHHHhh---cCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC
Q psy14428 255 Y----PGVK-TVYFPTPTWNGHVRFCTD---SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVD 326 (583)
Q Consensus 255 ~----~~gd-~Vlv~~P~y~~~~~~~~~---~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~ 326 (583)
. ++|| .|++++|+|+.+...+.. .|++++.+|+ ++ ++.+|++.+++.+ .++++++++++||||||.+
T Consensus 101 ~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i---~~~~~~v~~~~~~nptG~~ 175 (400)
T 3vax_A 101 APYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTP-GP-SGRISVEGVMERL---RPDTLLVSLMHVNNETGVI 175 (400)
T ss_dssp HHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECC-CT-TCCCCHHHHHTTC---CTTEEEEECCSBCTTTCBB
T ss_pred HHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEcc-CC-CCCcCHHHHHHhc---CCCceEEEEECCCCCceee
Confidence 3 5699 999999999887665554 5999999998 54 4678999988776 5678999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEE-E
Q psy14428 327 LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFS-V 399 (583)
Q Consensus 327 ~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv-~ 399 (583)
++ +++|+++|+++|++||+||+|...... ..+ ... ..+++.|+||.+|.+| +|+++ +
T Consensus 176 ~~---l~~i~~la~~~~~~li~D~a~~~~~~~------~~~----~~~-~d~~~~s~~K~~g~~g--~g~~~~~ 233 (400)
T 3vax_A 176 QP---VAELAQQLRATPTYLHVDAAQGYGKVP------GDL----TTP-IDMISISGHKIGAPKG--VGALVTR 233 (400)
T ss_dssp CC---HHHHHHHHTTSSCEEEEECTTTTTTSG------GGG----GSC-CSEEEEETGGGTSCSS--CEEEEEC
T ss_pred Cc---HHHHHHHHHhcCCEEEEEhhhhcCCCC------cCh----hhc-CcEEEEeHHHhCCCCc--eEEEEEe
Confidence 98 467788999999999999999743211 111 112 4588999999877555 67777 6
No 171
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.82 E-value=3.5e-19 Score=190.46 Aligned_cols=281 Identities=13% Similarity=0.089 Sum_probs=172.3
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLD--HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+...+|+..|.+....|. .++.+.+++.+.++.... ..| +.....+|++.+++++. .++|++ |+|
T Consensus 64 G~~ylD~~~g~~~~~lgh--~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g--------~~~v~~--~~s 130 (433)
T 1z7d_A 64 DKRYYDFLSAYSSVNQGH--CHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLLG--------YDKVLM--MNT 130 (433)
T ss_dssp CCEEEESSHHHHTTTTCB--TCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHHT--------CSEEEE--ESS
T ss_pred CCEEEEcccchhhcccCC--CCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhcC--------CCeEEE--eCC
Confidence 446688888776544442 347888888877754211 122 23334667777777652 478999 999
Q ss_pred chhHHHHHHHHHHHh------CCCC-CEEEEcCCCChhhHH-HHhhcC------------CeEEEEecccCCCCCCChhh
Q psy14428 240 GSGSLRVGTAFLERF------YPGV-KTVYFPTPTWNGHVR-FCTDSR------------LNVGAYRYFDNKTNGLDFAG 299 (583)
Q Consensus 240 ~~~al~l~~~~l~~~------~~~g-d~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~d~~~~g~d~~~ 299 (583)
+++|+..+..++..+ .++| |.|++++|+|..+.. .+...| ..++.+|. .|++.
T Consensus 131 GseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~ 203 (433)
T 1z7d_A 131 GAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEA 203 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHH
Confidence 999999875443321 1347 999999999987643 333333 23444444 17889
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 300 MMEDIKAMPERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 300 l~~~l~~~~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
+++.++ .++++++++...+|+||. +++++.+++|.++|+++|++||+||+|.+|...+. ...... .+....++
T Consensus 204 le~~l~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~---~~~~~~-~~~~~di~ 277 (433)
T 1z7d_A 204 LEEELK--DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK---LLCVHH-YNVKPDVI 277 (433)
T ss_dssp HHHHHT--STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSGGGG-GTCCCSEE
T ss_pred HHHHhC--CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc---chhhHh-cCCCCCEE
Confidence 988884 245666665544677897 47999999999999999999999999998765441 111111 11122333
Q ss_pred EEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCC---hhhhhhhhhHHH-HH
Q psy14428 379 LAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSD---PKLKAQCDETER-IM 453 (583)
Q Consensus 379 ~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~-~~ 453 (583)
||||.++ +| +|+||+++ + +++++.+........++.+++++.++...++. +.+.++..+... +.
T Consensus 278 ---t~sK~l~-~G~~~~G~v~~--~-----~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 346 (433)
T 1z7d_A 278 ---LLGKALS-GGHYPISAVLA--N-----DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFL 346 (433)
T ss_dssp ---EECGGGG-TTSSCCEEEEE--C-----HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred ---EECcccc-CCCCCeEEEEE--C-----HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 8999999 89 99999999 6 57777765543344567788888887776642 233333333332 22
Q ss_pred HHHHHHHhhccC---CCccchhhHHHHhcC
Q psy14428 454 SQLKILIRGFYS---NPPIHGARIVTEILS 480 (583)
Q Consensus 454 ~~l~~~~r~~~~---~~p~~g~~i~~~~l~ 480 (583)
+.++.+.. .+. ..+..|.++++.+..
T Consensus 347 ~~L~~l~~-~~~~~~~~~~~g~~~~i~~~~ 375 (433)
T 1z7d_A 347 ENLKRELK-DSKIVRDVRGKGLLCAIEFKN 375 (433)
T ss_dssp HHHHHHHT-TCTTEEEEEEETTEEEEEECT
T ss_pred HHHHHHHH-hCCCeEEEEeeeeEEEEEEcc
Confidence 33333211 121 234567777776643
No 172
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.81 E-value=9.1e-19 Score=187.51 Aligned_cols=283 Identities=11% Similarity=0.093 Sum_probs=181.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLD--HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|. .++.+.+++.+.++.... ..| +..-..+|++.+++++. .++|++ |+
T Consensus 74 ~g~~ylD~~sg~~~~~lgh--~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g--------~~~v~~--~~ 140 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGH--CHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLFN--------YHKVLP--MN 140 (439)
T ss_dssp TCCEEEESSGGGGTTTTCB--TCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHHT--------CSEEEE--ES
T ss_pred CCCEEEEccCCcccccCCC--CCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhcC--------CCEEEE--eC
Confidence 3456789998877544442 347888888777754211 123 23445788888888773 478999 99
Q ss_pred CchhHHHHHHHHHHHh------CCCC-CEEEEcCCCChhhH-HHHhhcC------------CeEEEEecccCCCCCCChh
Q psy14428 239 SGSGSLRVGTAFLERF------YPGV-KTVYFPTPTWNGHV-RFCTDSR------------LNVGAYRYFDNKTNGLDFA 298 (583)
Q Consensus 239 G~~~al~l~~~~l~~~------~~~g-d~Vlv~~P~y~~~~-~~~~~~G------------~~~~~v~~~d~~~~g~d~~ 298 (583)
|+++|++.+..++..+ .++| |.|++.+|+|..+. ..+...| ..++.+|. + |++
T Consensus 141 sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-~------d~~ 213 (439)
T 2oat_A 141 TGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-N------DLP 213 (439)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-S------CHH
T ss_pred CHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-C------CHH
Confidence 9999999875443321 1346 89999999997653 3444444 35666654 1 788
Q ss_pred hHHHHHHcCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE
Q psy14428 299 GMMEDIKAMPERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL 377 (583)
Q Consensus 299 ~l~~~l~~~~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v 377 (583)
.+++.++ .++++++++...+|+||. +++++.+++|.++|++||+++|+||+|.+|...+. ...+.. .+....+
T Consensus 214 ~le~~l~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~---~~~~~~-~~~~~Di 287 (439)
T 2oat_A 214 ALERALQ--DPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR---WLAVDY-ENVRPDI 287 (439)
T ss_dssp HHHHHTT--STTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SSGGGG-GTCCCSE
T ss_pred HHHHHhC--CCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc---chhHHH-hCCCCcE
Confidence 8888874 245666665444567896 57999999999999999999999999988765441 111111 1112233
Q ss_pred EEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHH
Q psy14428 378 CLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456 (583)
Q Consensus 378 i~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l 456 (583)
+ ||||.++ +| +|+||+++ + +++++.+........++.+++++.++...++.-.-+...++.++..+.+
T Consensus 288 ~---t~sK~l~-~G~~~~G~v~~--~-----~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l 356 (439)
T 2oat_A 288 V---LLGKALS-GGLYPVSAVLC--D-----DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIIL 356 (439)
T ss_dssp E---EECGGGG-TTSSCCEEEEE--C-----HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred E---Eeccccc-CCCCCeEEEEE--C-----HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3 9999999 79 99999999 6 5777776654334456778888888777665211112222233333333
Q ss_pred HHHHhhc-cC---CCccchhhHHHHhcC
Q psy14428 457 KILIRGF-YS---NPPIHGARIVTEILS 480 (583)
Q Consensus 457 ~~~~r~~-~~---~~p~~g~~i~~~~l~ 480 (583)
.+.++.. +. ..+..|.++++.+..
T Consensus 357 ~~~L~~l~~~~~~~~~~~g~~~~v~l~~ 384 (439)
T 2oat_A 357 RNELMKLPSDVVTAVRGKGLLNAIVIKE 384 (439)
T ss_dssp HHHHTTSCTTTEEEEEEETTEEEEEECC
T ss_pred HHHHHHhcCCCcEEEEeeeeEEEEEEec
Confidence 3333322 22 134567777776643
No 173
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.81 E-value=3.2e-19 Score=186.30 Aligned_cols=203 Identities=15% Similarity=0.084 Sum_probs=154.2
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
..++++.+.++ ..+ +.+++.+.... ..|.+..+..+||++++++++. +++++ ++||++|
T Consensus 7 ~~~~l~~~~~~-------~~~-~~~~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~~gt~a 65 (374)
T 3uwc_A 7 PYSYLERQFAD-------IEP-YLNDLREFIKT---ADFTLGAELEKFEKRFAALHNA--------PHAIG--VGTGTDA 65 (374)
T ss_dssp CSCCHHHHTSS-------CHH-HHHHHHHHHHH---TCCSSCHHHHHHHHHHHHHTTC--------SEEEE--ESCHHHH
T ss_pred eeeccccCCCC-------chH-HHHHHHHHHHc---CCcccChhHHHHHHHHHHHhCC--------CcEEE--eCCHHHH
Confidence 35666666653 334 77777776654 2578888999999999999863 26777 8889999
Q ss_pred HHHHHHHHHHh-CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCC
Q psy14428 244 LRVGTAFLERF-YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNP 322 (583)
Q Consensus 244 l~l~~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NP 322 (583)
+.++ +..+ ..+||+|++++|+|..+...++..|++++.+++ + +++.+|++.+++.+ .+++++++ |+||
T Consensus 66 ~~~~---~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~d~~~l~~~~---~~~~~~v~---~~n~ 134 (374)
T 3uwc_A 66 LAMS---FKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDS-E-NGYVIDPEKIEAAI---TDKTKAIM---PVHY 134 (374)
T ss_dssp HHHH---HHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECB-C-TTSSBCGGGTGGGC---CTTEEEEC---CBCG
T ss_pred HHHH---HHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEec-C-CCCCcCHHHHHHhC---CCCceEEE---EeCC
Confidence 9884 4556 677999999999999999999999999999998 5 45788999998876 45677766 8999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC-CCCCCchHHHHHHHHhcCcEEEEecCc--ccccccCccceEEEE
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS-GDFDKDAFSLRYFAKEVGQLCLAQSFS--KNMGLYGERVGTFSV 399 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~-~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~l~GlRiG~lv~ 399 (583)
||.+.+ +++|.++|+++|+++|+||+|..+.. ++ .. . ... ..+++.||| |.++.+|. .|++++
T Consensus 135 ~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~--~~---~----~~~-~d~~~~s~~~~K~l~~~g~-~g~~~~ 200 (374)
T 3uwc_A 135 TGNIAD---MPALAKIAKKHNLHIVEDACQTILGRIND--KF---V----GSW-GQFACFSLHPLKNLNVWSD-AGVIIT 200 (374)
T ss_dssp GGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT--EE---T----TSS-SSEEEEECSSSSSSCCSSC-CEEEEE
T ss_pred cCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCC--ee---c----ccc-ccEEEEeCCCCCcCCccce-eEEEEe
Confidence 999876 66778889999999999999987543 22 01 1 000 246677766 99985476 899998
Q ss_pred EcCCchhHHHHHHHHHHHH
Q psy14428 400 LTPTSDETERIMSQLKILI 418 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~ 418 (583)
++ +.+++++....
T Consensus 201 --~~----~~~~~~~~~~~ 213 (374)
T 3uwc_A 201 --HS----DEYAEKLRLYR 213 (374)
T ss_dssp --SC----HHHHHHHHHHT
T ss_pred --CC----HHHHHHHHHHH
Confidence 65 46777777654
No 174
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.81 E-value=3.4e-19 Score=184.99 Aligned_cols=203 Identities=12% Similarity=0.003 Sum_probs=137.2
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCE--
Q psy14428 183 LPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKT-- 260 (583)
Q Consensus 183 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~-- 260 (583)
++.+.+++.+.. ....|.+..+..+||++++++++.. ..++ ++||++|+.++ +..+..+||.
T Consensus 28 ~p~v~~ai~~~~---~~~~~~~~~~~~~l~~~la~~~~~~--------~~i~--~~~g~~a~~~a---~~~~~~~g~~~v 91 (359)
T 3pj0_A 28 LTEALQNIDDNL---ESDIYGNGAVIEDFETKIAKILGKQ--------SAVF--FPSGTMAQQIA---LRIWADRKENRR 91 (359)
T ss_dssp HHHHTTTSCTTC---BCCBTTBSHHHHHHHHHHHHHHTCS--------EEEE--ESCHHHHHHHH---HHHHHHHHTCCE
T ss_pred CHHHHHHHHhhc---ccCcccCCHHHHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHH---HHHHHhcCCCcE
Confidence 355555544422 1356878888999999999998632 2245 56677888875 3334344675
Q ss_pred EEEcCCCChhhH---HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q psy14428 261 VYFPTPTWNGHV---RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPT-GVDLSEDQWRQLA 336 (583)
Q Consensus 261 Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPT-G~~~s~~~~~~l~ 336 (583)
|+++.|++.... ......|++++.+|. + ++++|++.+++. .+++++++++|||||| |.+++.+++++|+
T Consensus 92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~----~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~ 164 (359)
T 3pj0_A 92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT-A--NQLLTIDDIKSL----REPVSSVLIELPQREIGGQLPAFEELEKIS 164 (359)
T ss_dssp EEECTTCHHHHSSTTHHHHHHCCEEEECSC-T--TSCCCHHHHHTC----SSCCSEEEEESSBGGGTSBCCCHHHHHHHH
T ss_pred EEEeccceeeehhcchHHHhcCceEEecCC-c--CCCcCHHHHHhc----cCCceEEEEEecccCCCcccCCHHHHHHHH
Confidence 555555543321 222556999998876 3 368899888765 4678899999999998 7999999999999
Q ss_pred HHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
++|+++|++||+|++|..+.... ...+...+.. ... +++.||||.++.++ . ||+++ + +++++++..
T Consensus 165 ~~~~~~~~~li~D~a~~~~~~~~---~~~~~~~~~~-~~d-~~~~s~sK~~~~~~-g-g~~~~--~-----~~l~~~~~~ 230 (359)
T 3pj0_A 165 EYCHEQGISLHLDGARLWEITPF---YQKSAEEICA-LFD-SVYVSFYKGIGGIA-G-AILAG--N-----DDFVQEAKI 230 (359)
T ss_dssp HHHHHHTCEEEEEETTCGGGHHH---HTCCHHHHHT-TCS-EEEEESSSTTCCSS-C-EEEEE--C-----HHHHHHHHH
T ss_pred HHHHHcCCEEEEECcchhcchhh---hCCCHHHhhc-cCC-EEEEeccccCCCcc-e-EEEEC--C-----HHHHHHHHH
Confidence 99999999999999986543210 0001222222 223 34568999998653 2 77777 5 589999887
Q ss_pred HHhccc
Q psy14428 417 LIRGFY 422 (583)
Q Consensus 417 ~~~~~~ 422 (583)
......
T Consensus 231 ~~~~~~ 236 (359)
T 3pj0_A 231 WKRRYG 236 (359)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 654443
No 175
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.81 E-value=1.6e-18 Score=184.91 Aligned_cols=283 Identities=12% Similarity=0.047 Sum_probs=175.5
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..+.+....|. .++.+.+++.+.+.......| +.....+|++.+++++. .+++|++ |+||
T Consensus 51 ~g~~ylD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~-------~~~~v~~--~~sG 118 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGH--NHPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLVP-------TMDMVRM--VNSG 118 (429)
T ss_dssp TCCEEEESSGGGTTCTTCB--TCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHST-------TCSEEEE--ESSH
T ss_pred CCCEEEECCCchhccccCC--CCHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhCC-------CCCEEEE--eCcH
Confidence 4556799988887655664 357888888877765322334 44444566666666542 3689999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh-hcC-------------------CeEEEEecccCCCCCCChhhH
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSR-------------------LNVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G-------------------~~~~~v~~~d~~~~g~d~~~l 300 (583)
++|++.+..+.+...+ ++.|++.+++|..+..... ..| ..+..++. -|++.+
T Consensus 119 sea~~~al~~a~~~~~-~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 190 (429)
T 4e77_A 119 TEATMSAIRLARGYTG-RDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASV 190 (429)
T ss_dssp HHHHHHHHHHHHHHHC-CCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHhhC-CCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC-------CCHHHH
Confidence 9999987554433333 6899999999987654211 111 11222222 178899
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCH--HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEE
Q psy14428 301 MEDIKAMPERSILFLQTSSHNPTGVDLSE--DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLC 378 (583)
Q Consensus 301 ~~~l~~~~~~~~~i~i~~p~NPTG~~~s~--~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi 378 (583)
++.+++..+++ .+++++|+||+|.++.. +.+++|.++|++||+++|+||+|.+| ..+ ....... .+....
T Consensus 191 e~~l~~~~~~~-~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g---~~~~~~~-~~~~pd-- 262 (429)
T 4e77_A 191 RQAFEQYPQEV-ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVA---LAGAQDY-YHVIPD-- 262 (429)
T ss_dssp HHHHHHSTTTE-EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTB---TTCHHHH-TTCCCS--
T ss_pred HHHHHhcCCCE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccC---cchHHHh-cCCCCC--
Confidence 88886543444 45557888887755544 45999999999999999999999998 433 1112222 122223
Q ss_pred EEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHH---hccccCCChHHHHHHHHHhC---ChhhhhhhhhH-HH
Q psy14428 379 LAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI---RGFYSNPPIHGARIVTEILS---DPKLKAQCDET-ER 451 (583)
Q Consensus 379 ~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~---~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~-~~ 451 (583)
+.||||.++ +|+|+||+++ + +++++.+.... ....++.+++++.++...++ ++.+.++..+. ..
T Consensus 263 -i~t~sK~~~-~G~~~G~~~~--~-----~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 333 (429)
T 4e77_A 263 -LTCLGKIIG-GGMPVGAFGG--R-----REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDS 333 (429)
T ss_dssp -EEEEEGGGG-TTSCCEEEEE--C-----HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHH
T ss_pred -eeeeccccc-CCCCeEEEEE--C-----HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 359999999 8999999999 6 57888776531 22345778888888877665 33333333332 23
Q ss_pred HHHHHHHHHhh--ccCCCccchhhHHHHhcC
Q psy14428 452 IMSQLKILIRG--FYSNPPIHGARIVTEILS 480 (583)
Q Consensus 452 ~~~~l~~~~r~--~~~~~p~~g~~i~~~~l~ 480 (583)
..+.++.+... .....+..|.++++.+..
T Consensus 334 l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~ 364 (429)
T 4e77_A 334 LATGLRHAAKEENIPLVVNHVGGMFGLFFTN 364 (429)
T ss_dssp HHHHHHHHHHHTTCCCEEEEETTEEEEECCS
T ss_pred HHHHHHHHHHhCCCceEEEEeeeEEEEEEcc
Confidence 33334333322 122345567777776654
No 176
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.80 E-value=5.7e-19 Score=182.97 Aligned_cols=241 Identities=12% Similarity=0.066 Sum_probs=159.8
Q ss_pred CChHHHHHHHHHhccCCCCCCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCE
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYA-NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKT 260 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~-~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~ 260 (583)
+++.+.+++.+.+.+. ..+|. ...+..++.+.+.+++.+..|.. ++++|++ |+|+++++.++ +..+..+ +.
T Consensus 15 ~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~--~~g~t~al~~~---~~~l~~~-~~ 86 (362)
T 3ffr_A 15 LYPTVRQHMITALDEK-IGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLF--LASATEIWERI---IQNCVEK-KS 86 (362)
T ss_dssp CCTTHHHHHHHHHHTT-TTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEE--ESCHHHHHHHH---HHHHCSS-EE
T ss_pred CCHHHHHHHHHHhcCC-ccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEE--eCCchHHHHHH---HHhccCC-cE
Confidence 4566776665555442 21111 22333344555555554444443 5678999 99999999985 4456665 56
Q ss_pred EEEcCCCChh-hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 261 VYFPTPTWNG-HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 261 Vlv~~P~y~~-~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
+++..|.|.. +...++..|++++.++. +. ++.+|++.++ ..++++++++++||||||.+++ +++|.++|
T Consensus 87 i~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~-----~~~~~~~v~~~~~~nptG~~~~---l~~i~~la 156 (362)
T 3ffr_A 87 FHCVNGSFSKRFYEFAGELGREAYKEEA-AF-GKGFYPADIT-----VPADAEIICLTHNETSSGVSMP---VEDINTFR 156 (362)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCGGGCC-----CCTTCCEEEEESEETTTTEECC---HHHHTTSG
T ss_pred EEEcCcHHHHHHHHHHHHhCCCeEEEec-CC-CCCCCHHHHh-----ccCCccEEEEEcCCCCcceeCC---HHHHHHHH
Confidence 6667777773 34567788999999998 43 4688998886 3678899999999999999999 55678889
Q ss_pred Hhc-CeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCchhHHHHHHHHHHH
Q psy14428 340 KQR-HLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 340 ~~~-~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~~~~~li~~l~~~ 417 (583)
+++ |++||+|++|....... +. . ...+++.|+||.++ ++|+ |++++ + +++++++...
T Consensus 157 ~~~p~~~li~D~a~~~~~~~~---~~-------~--~~d~~~~s~~K~~~~~~G~--g~~~~--~-----~~~~~~~~~~ 215 (362)
T 3ffr_A 157 DKNKDALIFVDAVSSLPYPKF---DW-------T--KIDSVFFSVQKCFGLPAGL--GVWIL--N-----DRVIEKSKAL 215 (362)
T ss_dssp GGSTTSEEEEECTTTTTSSCC---CT-------T--SCSEEEEETTSTTCCCSCC--EEEEE--E-----HHHHHHHHHH
T ss_pred HhCCCCEEEEecccccCCccc---Ch-------h--HCcEEEEecccccCCCCce--EEEEE--C-----HHHHHHhhhc
Confidence 999 99999999997654321 10 1 13488899999998 7884 77777 5 5788877765
Q ss_pred Hh---------------------ccccCCChHHHHHHHHHhC---ChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 418 IR---------------------GFYSNPPIHGARIVTEILS---DPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 418 ~~---------------------~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
.. ....+++...+.++...++ +..+++..++.++..+.+.+.++
T Consensus 216 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 283 (362)
T 3ffr_A 216 LAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIE 283 (362)
T ss_dssp HHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 43 1145567777766666554 22244444444444444444443
No 177
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.80 E-value=1.9e-18 Score=186.66 Aligned_cols=299 Identities=11% Similarity=0.080 Sum_probs=186.9
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...+|+..|.+....|.. ++.+.+++.+.++.. ...|....+..+.+.++++.+.+..+ ...++|++ ++||
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~--~~sG 125 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYG--RDELAEVAARQMREL-PYYNTFFKTTHVPAIALAQKLAELAP--GDLNHVFF--AGGG 125 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBC--CHHHHHHHHHHHHHC-SCCCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEE--ESSH
T ss_pred CCCEEEECCCchhhccCCCC--CHHHHHHHHHHHHhc-cccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCCH
Confidence 45567899988776666643 578888887776542 22344444555666667766665432 34679999 9999
Q ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEcCCCChhhHHHHhhcCC------------eEEEEecc---cCCCCCCC----
Q psy14428 241 SGSLRVGTAFLERFY-----PGVKTVYFPTPTWNGHVRFCTDSRL------------NVGAYRYF---DNKTNGLD---- 296 (583)
Q Consensus 241 ~~al~l~~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~G~------------~~~~v~~~---d~~~~g~d---- 296 (583)
++|++.+..++.... ++++.|++.+|+|..+.......+. .+..++.. ...++ .|
T Consensus 126 seA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~ 204 (472)
T 3hmu_A 126 SEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEF 204 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHH
Confidence 999998755544321 3468999999999887655544433 23344431 00111 23
Q ss_pred ----hhhHHHHHHcCC-CCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH
Q psy14428 297 ----FAGMMEDIKAMP-ERSILFLQTSSHNPTGVDL-SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF 370 (583)
Q Consensus 297 ----~~~l~~~l~~~~-~~~~~i~i~~p~NPTG~~~-s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~ 370 (583)
++.+++.+.+.. +++.++++..++|++|.+. +++.+++|.++|+++|+++|.||+|.+|...+. ......+
T Consensus 205 ~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~---~~a~~~~ 281 (472)
T 3hmu_A 205 GLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN---WFGTQTM 281 (472)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS---SCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc---cchhHHh
Confidence 677777775432 3456666656666777654 899999999999999999999999999876541 2222222
Q ss_pred HHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHH--HhccccCCChHHHHHHHHHhC---Chhhhhh
Q psy14428 371 AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKIL--IRGFYSNPPIHGARIVTEILS---DPKLKAQ 445 (583)
Q Consensus 371 ~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~--~~~~~~~~s~~~q~~~~~~l~---~~~~~~~ 445 (583)
+....++ +|||.++..|+|+||+++ + +++++.+... .....++.++++|.++...++ ++.+.++
T Consensus 282 -~v~pdi~---t~sK~l~gg~~plG~v~~--~-----~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~ 350 (472)
T 3hmu_A 282 -GIRPHIM---TIAKGLSSGYAPIGGSIV--C-----DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDH 350 (472)
T ss_dssp -TCCCSEE---EECGGGTTTSSCCEEEEE--E-----HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred -CCCCcee---eechhhhcCCcceEEEEE--C-----HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHH
Confidence 2233333 689999855599999999 6 5888888321 223356788999998888776 2333333
Q ss_pred hh-hH-HHHHHHHHHHHh-hccCCCccchhhHHHHhcCC
Q psy14428 446 CD-ET-ERIMSQLKILIR-GFYSNPPIHGARIVTEILSD 481 (583)
Q Consensus 446 ~~-~~-~~~~~~l~~~~r-~~~~~~p~~g~~i~~~~l~~ 481 (583)
.. +. ..+.+.++.+.+ ..+...+..|.++++.+..+
T Consensus 351 ~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~~~~~ 389 (472)
T 3hmu_A 351 VRNVAAPYLKEKWEALTDHPLVGEAKIVGMMASIALTPN 389 (472)
T ss_dssp HHHTHHHHHHHHHHGGGGSTTEEEEEEETTEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEEecCceEEEEEecC
Confidence 22 22 222222222111 11223445677777666543
No 178
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.80 E-value=1.2e-18 Score=181.93 Aligned_cols=193 Identities=13% Similarity=0.091 Sum_probs=150.1
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCCEE
Q psy14428 183 LPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVKTV 261 (583)
Q Consensus 183 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd~V 261 (583)
.+.+.+++.+.+.. ..|.+..+..+||+++|++++. +++++ |+||++|+.++ +..+ ..+||+|
T Consensus 15 ~~~v~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~~~--~~sGt~al~~a---l~~~~~~~gd~V 78 (367)
T 3nyt_A 15 KDKIDAGIQRVLRH---GQYILGPEVTELEDRLADFVGA--------KYCIS--CANGTDALQIV---QMALGVGPGDEV 78 (367)
T ss_dssp HHHHHHHHHHHHHH---CCCSSCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH---HHHTTCCTTCEE
T ss_pred CHHHHHHHHHHHhc---CCccCChHHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH---HHHhCCCCcCEE
Confidence 45677777766653 2466778899999999999963 36788 99999999985 4445 6679999
Q ss_pred EEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q psy14428 262 YFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ 341 (583)
Q Consensus 262 lv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~ 341 (583)
+++.|+|..+...++..|++++.+++ +++++.+|++.+++.+ .+++++++ |+||||...+ +++|.++|++
T Consensus 79 i~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~d~~~l~~~i---~~~~~~v~---~~~~~G~~~~---~~~i~~la~~ 148 (367)
T 3nyt_A 79 ITPGFTYVATAETVALLGAKPVYVDI-DPRTYNLDPQLLEAAI---TPRTKAII---PVSLYGQCAD---FDAINAIASK 148 (367)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCGGGTGGGC---CTTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred EECCCccHHHHHHHHHcCCEEEEEec-CCccCCcCHHHHHHhc---CcCCcEEE---eeCCccChhh---HHHHHHHHHH
Confidence 99999999999999999999999999 6666889999998877 56777776 8899997665 6667888999
Q ss_pred cCeEEEEeccCCCC-CCCCCCCchHHHHHHHHhcCcEEEEecC--cccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 342 RHLYPFFDMAYLGL-TSGDFDKDAFSLRYFAKEVGQLCLAQSF--SKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 342 ~~i~iI~De~Y~~l-~~~~~~~~~~~~~~~~~~~~~vi~i~S~--SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
+|++||+|++|... .+++ ... ...+ .+++.|| +|.++.+|. .|++++ ++ +++++++....
T Consensus 149 ~~~~li~D~a~~~g~~~~~--~~~-------~~~~-di~~~Sf~~~K~l~~~g~-gg~~~~--~~----~~l~~~~~~~~ 211 (367)
T 3nyt_A 149 YGIPVIEDAAQSFGASYKG--KRS-------CNLS-TVACTSFFPSAPLGCYGD-GGAIFT--ND----DELATAIRQIA 211 (367)
T ss_dssp TTCCBEEECTTTTTCEETT--EET-------TSSS-SEEEEECCTTSSSCCSSC-CEEEEE--SC----HHHHHHHHHHT
T ss_pred cCCEEEEECccccCCeECC--eec-------cCCC-CEEEEECCCCCcCCCcCc-eeEEEe--CC----HHHHHHHHHHH
Confidence 99999999999753 3332 111 0111 4788887 899986587 899998 65 46777777653
No 179
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.79 E-value=2.9e-18 Score=182.70 Aligned_cols=181 Identities=16% Similarity=0.134 Sum_probs=138.0
Q ss_pred CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcC-CCChhhHHHH----------h
Q psy14428 208 DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHVRFC----------T 276 (583)
Q Consensus 208 ~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~-P~y~~~~~~~----------~ 276 (583)
..+|++.+++++ |.+....+|++ + +|++|+..+ +..++.+||+|++++ |.|..+...+ +
T Consensus 67 ~~~l~~~la~~~----g~~~~~~~i~~--~-sGt~Ai~~a---l~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~ 136 (431)
T 3ht4_A 67 RDTLEKVYADVF----GAEAGLVRPQI--I-SGTHAISTA---LFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFK 136 (431)
T ss_dssp HHHHHHHHHHHT----TCSEECCBTTS--C-SHHHHHHHH---HHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSG
T ss_pred HHHHHHHHHHHh----CCCccccccee--e-CHHHHHHHH---HHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHH
Confidence 345555555554 44434445556 6 557898874 555677899999999 9999998665 4
Q ss_pred hcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeC-CCCCCCCCCCCHHHHHHHHHHHHh--cCeEEEEeccCC
Q psy14428 277 DSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQT-SSHNPTGVDLSEDQWRQLAVVVKQ--RHLYPFFDMAYL 353 (583)
Q Consensus 277 ~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~-~p~NPTG~~~s~~~~~~l~~~a~~--~~i~iI~De~Y~ 353 (583)
..|++++.++. ++ ++.+|++.+++.+ .+++++++++ +||||||.+++.+++++|+++|++ +|++||+||+|.
T Consensus 137 ~~G~~~~~v~~-~~-~~~~d~e~l~~~l---~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~ 211 (431)
T 3ht4_A 137 EYNIGYNAVPL-TE-GGLVDFEAVAAAI---HSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYG 211 (431)
T ss_dssp GGTCEEEECCB-CT-TSSBCHHHHHHHC---CTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTC
T ss_pred HcCCEEEEeCC-CC-CCCcCHHHHHhhc---CCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCCh
Confidence 47999999998 44 3678999999887 5678888888 699999999999999999999999 999999999999
Q ss_pred CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccc-cCccceEEEEEcCCchhHHHHHHHHHHHHhc
Q psy14428 354 GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGL-YGERVGTFSVLTPTSDETERIMSQLKILIRG 420 (583)
Q Consensus 354 ~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l-~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~ 420 (583)
.+.++. .+. ..+..++++|+||.+|. .+...||+++ + +++++++......
T Consensus 212 ~~~~~~---~~~-------~~g~Di~~~S~sK~lgg~~~~~GG~v~~--~-----~~li~~l~~~~~~ 262 (431)
T 3ht4_A 212 EFIEEQ---EPC-------HVGADLMAGSLIKNPGGGIVKTGGYIVG--K-----EQYVEACAYRLTS 262 (431)
T ss_dssp TTSSSC---CGG-------GTTCSEEEEETTSGGGTTTCSSCEEEEE--C-----HHHHHHHHHHHSC
T ss_pred hhccCC---Ccc-------ccCCeEEEcCccccCCCCCCCceEEEEe--c-----HHHHHHHHHHhcc
Confidence 998653 111 11345899999999652 1234499999 6 5899998875544
No 180
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.79 E-value=9.8e-18 Score=177.95 Aligned_cols=164 Identities=12% Similarity=0.049 Sum_probs=132.3
Q ss_pred CCCCCCC--CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH--
Q psy14428 199 DHEYANI--GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF-- 274 (583)
Q Consensus 199 ~~~Y~~~--~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~-- 274 (583)
.+.|+.. .+..++|+.++++++. +++++ |+|+++|+.++ +..+..+||+|++++|+|......
T Consensus 47 ~~~y~~~~~~~~~~l~~~la~~~g~--------~~~~~--~~~gt~a~~~a---l~~l~~~gd~vi~~~~~~~~~~~~~~ 113 (412)
T 2cb1_A 47 GYVYARQKDPTAKALEERLKALEGA--------LEAVV--LASGQAATFAA---LLALLRPGDEVVAAKGLFGQTIGLFG 113 (412)
T ss_dssp SCSBTTTCCHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH---HHTTCCTTCEEEEETTCCHHHHHHHH
T ss_pred CcCcCCCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHHhCCCCEEEEeCCCchhHHHHHH
Confidence 4567644 5678999999999853 37888 99999999985 444567799999999999876554
Q ss_pred --HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccC
Q psy14428 275 --CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY 352 (583)
Q Consensus 275 --~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y 352 (583)
++..|++++.++. |++.+++.+ .++++++++++|+||||.+++ +++|.++|+++|+++|+||+|
T Consensus 114 ~~~~~~g~~~~~~~~--------~~~~l~~~i---~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~ 179 (412)
T 2cb1_A 114 QVLSLMGVTVRYVDP--------EPEAVREAL---SAKTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTF 179 (412)
T ss_dssp HTTTTTTCEEEEECS--------SHHHHHHHC---CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGG
T ss_pred HHHHHcCCEEEEECC--------CHHHHHHHh---ccCCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCC
Confidence 4557999988876 367777776 567899999999999999996 778899999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 353 LGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 353 ~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
..+.+.. .+ . ..+..+++.|+||.++.||.|+|++++
T Consensus 180 ~~~~~~~---~~--~-----~~~~di~~~S~~K~~~~~~~~~G~~~~ 216 (412)
T 2cb1_A 180 GAAGALC---RP--L-----AWGAHVVVESLTKWASGHGSVLGGAVL 216 (412)
T ss_dssp GTTTTSC---CG--G-----GGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred ccccccC---Cc--c-----ccCCeEEEECCcccccCCCCcEEEEEE
Confidence 8873221 11 1 135789999999999989999999998
No 181
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.79 E-value=1.4e-19 Score=187.78 Aligned_cols=189 Identities=12% Similarity=0.021 Sum_probs=129.6
Q ss_pred CChHHHHHHHHHhccC---CCCCCCC---CCC----CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc-hhHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKN---LDHEYAN---IGG----DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG-SGSLRVGTAF 250 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~---~~~~Y~~---~~G----~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~-~~al~l~~~~ 250 (583)
+++.+.+++.+.+.+. ....|.. ..+ ..++|+.++++++ .. ++++|++ |+|+ ++|+.++
T Consensus 14 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g----~~-~~~~v~~--~~g~gt~al~~~--- 83 (360)
T 1w23_A 14 LPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ----IP-NDYQILF--LQGGASLQFTML--- 83 (360)
T ss_dssp CCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT----CC-TTEEEEE--ESSHHHHHHHHH---
T ss_pred CCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEE--ECCcchHHHHHH---
Confidence 5678888887766431 0111211 223 3566666776664 33 4679999 9999 9999986
Q ss_pred HHHhCC---CCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHH-HHHcCCCCcEEEEeCCCCCCCCCC
Q psy14428 251 LERFYP---GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME-DIKAMPERSILFLQTSSHNPTGVD 326 (583)
Q Consensus 251 l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~-~l~~~~~~~~~i~i~~p~NPTG~~ 326 (583)
+..+.. +||.|+++.++|... ..++..| +++.+|+ +++++.+|++.+++ .+ .++++++++++||||||.+
T Consensus 84 ~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~-~~~~~~~d~~~l~~~~i---~~~~k~v~~~~~~nptG~~ 157 (360)
T 1w23_A 84 PMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAAS-TKANSYQSIPDFSEFQL---NENDAYLHITSNNTIYGTQ 157 (360)
T ss_dssp HHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEE-CGGGTSCSCCCGGGCCC---CTTEEEEEEESEETTTTEE
T ss_pred HHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeec-ccccCcCCccchHhhcc---CCCCCEEEEeCCCCCccee
Confidence 233333 366777777766543 3467789 9999998 54233478888776 55 5678999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchh
Q psy14428 327 LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDE 406 (583)
Q Consensus 327 ~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~ 406 (583)
++ ++ ++++|++||+||+|..+...- .+ ...+ +++.|+||.+|++| +||+++ +
T Consensus 158 ~~--~i------~~~~~~~li~D~a~~~~~~~~------~~----~~~d--i~~~s~sK~~~~~G--~G~~~~--~---- 209 (360)
T 1w23_A 158 YQ--NF------PEINHAPLIADMSSDILSRPL------KV----NQFG--MIYAGAQKNLGPSG--VTVVIV--K---- 209 (360)
T ss_dssp CS--SC------CCCCSSCEEEECTTTTTSSCC------CG----GGCS--EEEEETTTTTSCTT--CEEEEE--E----
T ss_pred cc--cc------cccCCceEEEechhhcCCCCc------Cc----ccCC--EEEEEcccccCCCC--cEEEEE--c----
Confidence 87 22 238999999999998765321 11 1122 78999999999776 999999 6
Q ss_pred HHHHHHHHH
Q psy14428 407 TERIMSQLK 415 (583)
Q Consensus 407 ~~~li~~l~ 415 (583)
+++++++.
T Consensus 210 -~~~~~~~~ 217 (360)
T 1w23_A 210 -KDLLNTKV 217 (360)
T ss_dssp -HHHHCSCC
T ss_pred -HHHHhhcc
Confidence 45655443
No 182
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.79 E-value=1.4e-17 Score=173.67 Aligned_cols=193 Identities=12% Similarity=0.066 Sum_probs=148.0
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh---CCCC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF---YPGV 258 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~---~~~g 258 (583)
+++.+.+++.+.+... .|.+..+..+||++++++++. +++++ |+|+++|+.++ +..+ ..+|
T Consensus 11 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~v~~--~~ggt~al~~~---~~~~~~~~~~g 74 (375)
T 2fnu_A 11 LDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLGV--------KHALV--FNSATSALLTL---YRNFSEFSADR 74 (375)
T ss_dssp CCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH---HHHSSCCCTTS
T ss_pred CCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH---HHHhcccCCCC
Confidence 5678888888877542 245566789999999999953 28999 99999999985 4455 6679
Q ss_pred CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 259 KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 259 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
|+|++++|+|..+...++..|++++.+++ +++ ..+|++.+++.+ .++++++++++| ||.+.+ +++|.++
T Consensus 75 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~d~~~l~~~i---~~~~~~v~~~~~---tG~~~~---l~~i~~l 143 (375)
T 2fnu_A 75 NEIITTPISFVATANMLLESGYTPVFAGI-KND-GNIDELALEKLI---NERTKAIVSVDY---AGKSVE---VESVQKL 143 (375)
T ss_dssp CEEEECSSSCTHHHHHHHHTTCEEEECCB-CTT-SSBCGGGSGGGC---CTTEEEEEEECG---GGCCCC---HHHHHHH
T ss_pred CEEEECCCccHhHHHHHHHCCCEEEEecc-CCC-CCCCHHHHHhhc---CcCceEEEEeCC---cCCccC---HHHHHHH
Confidence 99999999999999999999999999998 554 368999888776 457788777766 999987 5677888
Q ss_pred HHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc--ccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 339 VKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS--KNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 339 a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
|+++|++||+||+|....... . ..+ ...+ .+++.||| |.++. | +|++++ .+. +++++++..
T Consensus 144 ~~~~~~~li~D~a~~~~~~~~---~-~~~----~~~~-~i~~~s~s~~K~~~~-g--~g~~~~--~~~---~~~~~~~~~ 206 (375)
T 2fnu_A 144 CKKHSLSFLSDSSHALGSEYQ---N-KKV----GGFA-LASVFSFHAIKPITT-A--EGGAVV--TND---SELHEKMKL 206 (375)
T ss_dssp HHHHTCEEEEECTTCTTCEET---T-EET----TSSS-SEEEEECCTTSSSCC-S--SCEEEE--ESC---HHHHHHHHH
T ss_pred HHHcCCEEEEECccccCCeEC---C-eec----cccC-CeEEEeCCCCCCccc-c--CceEEE--eCC---HHHHHHHHH
Confidence 999999999999998655321 0 011 1112 48888999 99974 7 788887 321 367777765
Q ss_pred HH
Q psy14428 417 LI 418 (583)
Q Consensus 417 ~~ 418 (583)
..
T Consensus 207 ~~ 208 (375)
T 2fnu_A 207 FR 208 (375)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 183
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.79 E-value=5.8e-18 Score=180.99 Aligned_cols=189 Identities=13% Similarity=0.110 Sum_probs=143.7
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH----HhhcCCe
Q psy14428 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSRLN 281 (583)
Q Consensus 206 ~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~ 281 (583)
....+||++++++++. ++.|++ ++|+ +|+.++ +..+..+||+|++++|+|..+... ++..|++
T Consensus 114 ~~~~~l~~~lA~l~g~-------~~~v~~--~sG~-~Ai~~a---l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 180 (445)
T 1qgn_A 114 PTTVVLEEKISALEGA-------ESTLLM--ASGM-CASTVM---LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGIT 180 (445)
T ss_dssp HHHHHHHHHHHHHHTC-------SEEEEE--SCHH-HHHHHH---HHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred hHHHHHHHHHHHHhCC-------CcEEEe--CCHH-HHHHHH---HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence 3446899999999852 256666 7766 899885 444566799999999999987764 5667999
Q ss_pred EEEEecccCCCCCCChhhHHHHHHcCCCCc-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 282 VGAYRYFDNKTNGLDFAGMMEDIKAMPERS-ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 282 ~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~-~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
++.++. + |++.+++.+. +++ +++++++|+||||.+.+ +++|.++|+++|+++|+|++|.......
T Consensus 181 v~~v~~-~------d~~~l~~ai~---~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~- 246 (445)
T 1qgn_A 181 ATVIDP-A------DVGALELALN---QKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQK- 246 (445)
T ss_dssp EEEECS-S------CHHHHHHHHH---HSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EEEeCC-C------CHHHHHHHhc---cCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 998876 2 7889988884 457 89999999999999997 5677888999999999999998654321
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
++ ..+..+++.|+||.++..| +|+||+++ + +++++++...........+.+..+++...++
T Consensus 247 -----~~-----~~g~Div~~S~sK~~gg~gd~~~G~l~~--~-----~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~ 308 (445)
T 1qgn_A 247 -----AL-----ALGADLVLHSATKFLGGHNDVLAGCISG--P-----LKLVSEIRNLHHILGGALNPNAAYLIIRGMK 308 (445)
T ss_dssp -----TT-----TTTCSEEEECTTTTTTCSSSCCCEEEEE--C-----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG
T ss_pred -----cc-----ccCCEEEEECCcccccccccceEEEEEE--C-----HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH
Confidence 11 1245689999999998555 48999999 6 5788888776554455566666666655554
No 184
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.79 E-value=1.5e-18 Score=183.81 Aligned_cols=207 Identities=15% Similarity=0.107 Sum_probs=130.7
Q ss_pred CChHHHHHHHHHhccCCCCCC------CCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEY------ANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y------~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~ 255 (583)
.++.+.+++.+.+.+....+| .......++++.+.+.+.+..| +++++|++ ++| ++|+.++ +..+.
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~--~sG-t~a~~~~---~~~~~ 108 (417)
T 3n0l_A 37 TLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQP--NSG-SQANQGV---YAALI 108 (417)
T ss_dssp CCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCC--SSH-HHHHHHH---HHHHS
T ss_pred CCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEe--ccH-HHHHHHH---HHHhc
Confidence 357888887766633211222 2233334555533333333222 35677888 888 7999985 44557
Q ss_pred CCCCEEEEcCCCChhhHH---HHhhc--CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q psy14428 256 PGVKTVYFPTPTWNGHVR---FCTDS--RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330 (583)
Q Consensus 256 ~~gd~Vlv~~P~y~~~~~---~~~~~--G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~ 330 (583)
.+||+|++++|+|..+.. .+... +..++.+++ + +++.+|++.+++.+.+ .+++++++++|+| |.+++
T Consensus 109 ~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~--G~~~~-- 180 (417)
T 3n0l_A 109 NPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGV-E-LDGRIDYEKVREIAKK--EKPKLIVCGASAY--ARVID-- 180 (417)
T ss_dssp CTTCEEEEECC----------------CCSEEEEECC-C-TTSSCCHHHHHHHHHH--HCCSEEEECCSSC--CSCCC--
T ss_pred CCCCEEEecccccccccchhhhhhhhcceeeeEeccC-C-CCCCcCHHHHHHHHHh--cCCeEEEECCccc--CccCC--
Confidence 779999999999987654 33333 445666666 4 4567899999998852 3567777888887 77777
Q ss_pred HHHHHHHHHHhcCeEEEEeccC-CCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHH
Q psy14428 331 QWRQLAVVVKQRHLYPFFDMAY-LGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETER 409 (583)
Q Consensus 331 ~~~~l~~~a~~~~i~iI~De~Y-~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~ 409 (583)
+++|.++|+++|++||+||++ .++.+.+. .+..+ ....+++.||||.+ +|+|+||+++ ++ ++
T Consensus 181 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~~~~~------~~~di~~~s~sK~l--~g~~~G~~~~--~~----~~ 243 (417)
T 3n0l_A 181 -FAKFREIADEIGAYLFADIAHIAGLVVAGE--HPSPF------PYAHVVSSTTHKTL--RGPRGGIIMT--ND----EE 243 (417)
T ss_dssp -HHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCCT------TTCSEEEEESSTTT--CSCSCEEEEE--SC----HH
T ss_pred -HHHHHHHHHHcCCEEEEECccchhhhhccc--CCCcc------ccceEEEeeCcccc--CCCCeeEEEE--CC----HH
Confidence 778899999999999999995 33333221 01011 12358899999987 7999999999 64 36
Q ss_pred HHHHHHHHHhcc
Q psy14428 410 IMSQLKILIRGF 421 (583)
Q Consensus 410 li~~l~~~~~~~ 421 (583)
+++.+.......
T Consensus 244 ~~~~~~~~~~~~ 255 (417)
T 3n0l_A 244 LAKKINSAIFPG 255 (417)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHhhhhCCc
Confidence 788877665433
No 185
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.79 E-value=5.8e-18 Score=179.03 Aligned_cols=183 Identities=15% Similarity=0.168 Sum_probs=141.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe-cCCchhHHHHHHHHHHHhCCCCCEEEEcC-CCChhhHHH---
Q psy14428 200 HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ-GISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHVRF--- 274 (583)
Q Consensus 200 ~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~-t~G~~~al~l~~~~l~~~~~~gd~Vlv~~-P~y~~~~~~--- 274 (583)
+.|+. .|...|++.+|++++. +..++++ +++|++|+.++ +..++.+||+|++++ |.|..+...
T Consensus 54 ~~y~~-~~~~~Le~~lA~l~g~--------e~alv~p~~~sGt~Ai~~a---l~all~~GD~Vl~~~~~~y~~~~~~~~~ 121 (409)
T 3jzl_A 54 YGYDD-EGRDTLERVYATVFKT--------EAALVRPQIISGTHAISTV---LFGILRPDDELLYITGQPYDTLEEIVGI 121 (409)
T ss_dssp TCTTC-HHHHHHHHHHHHHHTC--------SEEEEETTSCSHHHHHHHH---HHHHCCTTCEEEECSSSCCTTHHHHHTS
T ss_pred CCCCh-hHHHHHHHHHHHHhCC--------CcEEEECCCccHHHHHHHH---HHHhcCCCCEEEEeCCCCcHhHHHHHhc
Confidence 34543 4678999999999863 2333322 67788998874 445677799999998 999998854
Q ss_pred -------HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCC----CCCCCCCCCCHHHHHHHHHHHHh--
Q psy14428 275 -------CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTS----SHNPTGVDLSEDQWRQLAVVVKQ-- 341 (583)
Q Consensus 275 -------~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~----p~NPTG~~~s~~~~~~l~~~a~~-- 341 (583)
++..|++++.+++ ++ ++.+|++.+++++ .++++++++++ |+||||.+ .++++|+++|++
T Consensus 122 ~g~~~~~l~~~G~~~~~v~~-~~-~g~~d~e~l~~ai---~~~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~~~~ 193 (409)
T 3jzl_A 122 RKQGQGSLKDFHIGYSSVPL-LE-NGDVDFPRIAKKM---TPKTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVKNIN 193 (409)
T ss_dssp SSSSSSCTGGGTCEEEECCC-CT-TSCCCHHHHHHHC---CTTEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHHHHC
T ss_pred ccchhhHHHHcCCEEEEeCC-CC-CCCcCHHHHHHhc---cCCCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHHhhC
Confidence 4667999999998 44 4678999999887 56789999999 99999854 678999999999
Q ss_pred cCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHh
Q psy14428 342 RHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIR 419 (583)
Q Consensus 342 ~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~ 419 (583)
+++++|+|++|..+.+.. .+. ..+..++++|+||.++.+| .+.||+++ + ++++++++....
T Consensus 194 ~~~~livD~a~~~~~~~~---~p~-------~~g~Div~~S~sK~lgg~~~~~GG~v~~--~-----~~li~~l~~~~~ 255 (409)
T 3jzl_A 194 PEVIVFVDNCYGEFVEYQ---EPP-------EVGADIIAGSLIKNPGGGLAKTGGYIAG--K-----EALVDLCGYRLT 255 (409)
T ss_dssp TTCEEEEECTTCTTTSSC---CSG-------GGTCSEEEEETTSGGGTTTCSSCEEEEE--C-----HHHHHHHHHHHS
T ss_pred CCCEEEEeCCcccccccC---Ccc-------ccCCeEEEECccccCCccCCceEEEEEe--C-----HHHHHHHHHHhc
Confidence 999999999999887542 111 1234689999999998666 45689998 6 589999987553
No 186
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.79 E-value=1.2e-18 Score=187.16 Aligned_cols=286 Identities=10% Similarity=0.037 Sum_probs=174.8
Q ss_pred CCccccCCccccCCCCCCCCChHHH-H-HHHH---HhccCCCCCCC---CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVK-E-AERR---IYEKNLDHEYA---NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~-~-a~~~---~~~~~~~~~Y~---~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
...+|+..+.+....|. .++.+. + ++.+ ..... ..|+ +..-..+|++.+++++. ...+++|++
T Consensus 54 ~~ylD~~~~~~~~~lG~--~~p~v~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~~la~~la~~~~-----~~~~~~v~~ 124 (449)
T 2cjg_A 54 RRYLDMFTFVASSALGM--NPPALVDDREFHAELMQAALN--KPSNSDVYSVAMARFVETFARVLG-----DPALPHLFF 124 (449)
T ss_dssp CEEEESSHHHHTCSSCB--SCHHHHTCHHHHHHHHHHHTC--CCCTTTCCCHHHHHHHHHHHHHHC-----CTTCCEEEE
T ss_pred cEEEEccCCccccCCCC--CCHHHHHHHHHHHHHHHHHhc--CCCCcccCCHHHHHHHHHHHHhcC-----CCCCCEEEE
Confidence 45678887777555553 246777 7 7776 54432 1222 22223566666776664 145789999
Q ss_pred EecCCchhHHHHHHHHHHHhC-----------CCCCEEEEcCCCChhhHHHHhh-cC--------C-----eEEEEeccc
Q psy14428 235 VQGISGSGSLRVGTAFLERFY-----------PGVKTVYFPTPTWNGHVRFCTD-SR--------L-----NVGAYRYFD 289 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~-----------~~gd~Vlv~~P~y~~~~~~~~~-~G--------~-----~~~~v~~~d 289 (583)
|+|+++|++.+..++..+. ++||.|++.+|+|..+...... .| . .++.+|..|
T Consensus 125 --~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 202 (449)
T 2cjg_A 125 --VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMR 202 (449)
T ss_dssp --ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred --eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCC
Confidence 9999999998754443222 1389999999999876442211 11 1 455666522
Q ss_pred C-CCC-------CCChhhHHHHHHcCCCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 290 N-KTN-------GLDFAGMMEDIKAMPERSILFLQTSSHNPTG-VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 290 ~-~~~-------g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG-~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
. .+. ..+++.+++.+++..+++++++++..||||| .+++++++++|.++|++||+++|+||+|.+|.+.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~ 282 (449)
T 2cjg_A 203 PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT 282 (449)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred chhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc
Confidence 0 000 1244557777754345677776665579999 599999999999999999999999999999876551
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHH-----HHHhccccCCChHHHHHHHH
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLK-----ILIRGFYSNPPIHGARIVTE 435 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~-----~~~~~~~~~~s~~~q~~~~~ 435 (583)
......+ +....+ .||||.+ |+||+++ + +++++.+. .......++.++++|.++..
T Consensus 283 ---~~~~~~~-~~~~di---~t~sK~l-----~iG~~~~--~-----~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~a 343 (449)
T 2cjg_A 283 ---AWAYQQL-DVAPDI---VAFGKKT-----QVCGVMA--G-----RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARR 343 (449)
T ss_dssp ---SSTHHHH-TCCCSE---EEECGGG-----SSEEEEE--C-----GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHH
T ss_pred ---ceeeccc-CCCceE---EEecCcc-----cEEEEEE--C-----HHHhhhhhhcccCCcccccCCCCCHHHHHHHHH
Confidence 1122221 222333 3799987 8999999 6 35666422 12222356778899998887
Q ss_pred HhC---ChhhhhhhhhHHH-HHHHHHHHHhh--c-cCCCccchhhHHHHh
Q psy14428 436 ILS---DPKLKAQCDETER-IMSQLKILIRG--F-YSNPPIHGARIVTEI 478 (583)
Q Consensus 436 ~l~---~~~~~~~~~~~~~-~~~~l~~~~r~--~-~~~~p~~g~~i~~~~ 478 (583)
.++ ++.+.++..+... +.+.++.+... . +...+..|.++++.+
T Consensus 344 al~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~ 393 (449)
T 2cjg_A 344 ILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSL 393 (449)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEEC
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEE
Confidence 775 3334333333332 23333332111 1 222445677776544
No 187
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.78 E-value=2.2e-17 Score=174.86 Aligned_cols=196 Identities=10% Similarity=-0.013 Sum_probs=130.7
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCC-----C---CCCCHHHHHHHHHHHhCCCCCCCCCCCeEE
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYA-----N---IGGDAKFCKLAAQLAYGEDFPAFKDNRLAI 234 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~-----~---~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i 234 (583)
++.+.|..+... .+++.+.+++.+.+... ...+. + .....++|+++++++ | +++++|++
T Consensus 27 ~~~~yld~~~~~------~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~ 93 (416)
T 1qz9_A 27 EGVIYLDGNSLG------ARPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLI----G--ARDGEVVV 93 (416)
T ss_dssp TTCEECCTTTSC------CCBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTT----T--CCTTSEEE
T ss_pred CCeEeecCCCcC------CCcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHc----C--CCcccEEE
Confidence 345566655432 14567777777766532 11111 0 133456666666665 3 35789999
Q ss_pred EecCCchhHHHHHHHHHHHhC---CCCCE-EEEcCCCChhhHHHH----hhc--CCeEEEEecccCCCCCCChhhHHHHH
Q psy14428 235 VQGISGSGSLRVGTAFLERFY---PGVKT-VYFPTPTWNGHVRFC----TDS--RLNVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~---~~gd~-Vlv~~P~y~~~~~~~----~~~--G~~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
|+|+++++.++...+..+. .+||+ |+++.++|+.+...+ +.. |++++.+|+ ++.+++.+
T Consensus 94 --~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i 162 (416)
T 1qz9_A 94 --TDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAI 162 (416)
T ss_dssp --CSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHC
T ss_pred --eCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHh
Confidence 9999999987533322120 45886 455556788654433 223 898888764 45676666
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCc
Q psy14428 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFS 384 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 384 (583)
.++++++++++|+||||.+++ +++|.++|+++|++||+||+|..-.. + ..+..+ +..+++.|+|
T Consensus 163 ---~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~-----~-~~~~~~----~~d~~~~s~~ 226 (416)
T 1qz9_A 163 ---DQDTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGAV-----P-VDLHQA----GADYAIGCTY 226 (416)
T ss_dssp ---STTEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS-----C-CCHHHH----TCSEEEECSS
T ss_pred ---CCCceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccCc-----C-CChhhc----CCCEEEecCc
Confidence 457899999999999999998 67788899999999999999973211 1 122221 3458889999
Q ss_pred ccccccCccc-eEEEE
Q psy14428 385 KNMGLYGERV-GTFSV 399 (583)
Q Consensus 385 K~~~l~GlRi-G~lv~ 399 (583)
|.++ +|.|+ ||+++
T Consensus 227 K~l~-~g~~~~g~l~~ 241 (416)
T 1qz9_A 227 KYLN-GGPGSQAFVWV 241 (416)
T ss_dssp STTC-CCTTCCCEEEE
T ss_pred ccCC-CCCCCeEEEEE
Confidence 9985 78888 99999
No 188
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.77 E-value=1.5e-17 Score=176.54 Aligned_cols=189 Identities=13% Similarity=0.053 Sum_probs=141.4
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRL 280 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 280 (583)
..-..+|++.+|++++. +++++ ++||++|+.++ +..++.+||+|++++|.|......+ +..|+
T Consensus 81 ~p~~~~le~~lA~l~g~--------~~~i~--~ssGt~Ai~~a---l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~ 147 (415)
T 2fq6_A 81 TLTHFSLQQAMCELEGG--------AGCVL--FPCGAAAVANS---ILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGV 147 (415)
T ss_dssp CHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH---HHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred CchHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH---HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence 33457799999999853 34666 77889999884 4556677999999999999887654 45799
Q ss_pred eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh--cCeEEEEeccCCCCCCC
Q psy14428 281 NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ--RHLYPFFDMAYLGLTSG 358 (583)
Q Consensus 281 ~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~--~~i~iI~De~Y~~l~~~ 358 (583)
++..++. + |++.+++++ .++++++++++|+||||.+++ +++|+++|++ +|+++|+|++|......
T Consensus 148 ~v~~v~~-~------d~~~le~ai---~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~ 214 (415)
T 2fq6_A 148 TTSWFDP-L------IGADIVKHL---QPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF 214 (415)
T ss_dssp EEEEECT-T------CGGGGGGGC---CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS
T ss_pred EEEEECC-C------CHHHHHHhh---ccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC
Confidence 9988866 1 677777766 567899999999999999997 5677888999 99999999999865432
Q ss_pred CCCCchHHHHHHHHhcCcEEEEecCcccccccCcc-ceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHh
Q psy14428 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER-VGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEIL 437 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR-iG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l 437 (583)
. ++ + .+..+++.|+||.++.+|.+ +||+++ ++ ++++++...........+...++++...+
T Consensus 215 ~------p~----~-~g~Div~~S~sK~lg~~g~~~~G~l~~--~~-----~~~~~l~~~~~~~G~~~~~~~a~~~~~~l 276 (415)
T 2fq6_A 215 K------AL----D-FGIDVSIQAATKYLVGHSDAMIGTAVC--NA-----RCWEQLRENAYLMGQMVDADTAYITSRGL 276 (415)
T ss_dssp C------GG----G-GTCSEEEEETTTTTTCSSSCCCEEEEE--CT-----TTHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred C------cc----c-cCCeEEEEeCccccCCCCCceEEEEEe--CH-----HHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 1 11 1 24568999999999988876 589888 53 46677766554444455665555544444
No 189
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.77 E-value=2.7e-18 Score=185.72 Aligned_cols=205 Identities=11% Similarity=0.066 Sum_probs=152.8
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH-hCCCCC-----EEEEcCCCChhhHHHHhhc
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER-FYPGVK-----TVYFPTPTWNGHVRFCTDS 278 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~-~~~~gd-----~Vlv~~P~y~~~~~~~~~~ 278 (583)
.+|..++++++++++.+..|.+. .+++ |+|+++|+..+..+++. +..+|| +|++++|+|+.+...++..
T Consensus 102 ~~g~~~l~~~l~~~la~~~g~~~---~~~~--~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~ 176 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTGMDA---ITLE--PAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMA 176 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSE---EECC--CSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHCCCc---eeec--ChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHC
Confidence 67888899999888887666542 3556 89999998874333322 123477 9999999999999999999
Q ss_pred CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCC
Q psy14428 279 RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSG 358 (583)
Q Consensus 279 G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~ 358 (583)
|++++.+|+ ++ ++.+|++.+++.+ .++++++++++| ||||.+. +++++|+++|+++|+++|+||+|....++
T Consensus 177 G~~vv~v~~-~~-~~~~d~~~L~~~i---~~~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g 248 (474)
T 1wyu_B 177 GYQVREIPS-GP-EGEVDLEALKREL---GPHVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMG 248 (474)
T ss_dssp TCEEEEECB-CT-TSSBCHHHHHHHC---STTEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTT
T ss_pred CCEEEEecC-CC-CCCcCHHHHHHhh---CCCceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhcc
Confidence 999999998 54 4678999999887 567889999998 7999873 46889999999999999999999877653
Q ss_pred CCCCchHHHHHHHHhcCcEEEEecCccccccc-C---ccceEEEEEcCCchhHHHHHHHHHH-HH---------------
Q psy14428 359 DFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY-G---ERVGTFSVLTPTSDETERIMSQLKI-LI--------------- 418 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~-G---lRiG~lv~~~p~~~~~~~li~~l~~-~~--------------- 418 (583)
. . .... .+..+++.|++|+|++| | .|+||+++ ++ ++++.+.. ..
T Consensus 249 ~--~---~~~~----~g~di~~~s~~K~~~~p~g~gG~~~G~~~~--~~-----~l~~~l~~~~~~~~g~~~~~~~~~~~ 312 (474)
T 1wyu_B 249 W--A---RPGD----MGFDVVHLNLHKTFTVPHGGGGPGSGPVGV--KA-----HLAPYLPVPLVERGEEGFYLDFDRPK 312 (474)
T ss_dssp T--C---CHHH----HTCSEEECCTTTTTCCCCTTSCCCCCCEEE--CG-----GGGGGCCSCEEEECSSCEEEECCCTT
T ss_pred C--C---Cccc----CCCcEEEEeCccccccCCCCCCCCeEEEEE--cH-----HHHHhCCCCeeeccCCeeEecccCcc
Confidence 2 1 1111 24567888999999887 5 59999999 63 45555531 10
Q ss_pred ---hccccCCChHHHHHHHHHhC
Q psy14428 419 ---RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 419 ---~~~~~~~s~~~q~~~~~~l~ 438 (583)
+....+.+.+.+.++..++.
T Consensus 313 ~~~~~~~~~~~~~~~~aa~~~l~ 335 (474)
T 1wyu_B 313 SIGRVRSFYGNFLALVRAWAYIR 335 (474)
T ss_dssp CCCCSSSTTSCHHHHHHHHHHHH
T ss_pred cCcccccCcCcHHHHHHHHHHHH
Confidence 01122456777888777775
No 190
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.77 E-value=3.9e-18 Score=178.21 Aligned_cols=193 Identities=18% Similarity=0.102 Sum_probs=147.6
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCCCEE
Q psy14428 183 LPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGVKTV 261 (583)
Q Consensus 183 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~gd~V 261 (583)
.+.+.+++.+.+... .|.+..+..+||++++++++. +++++ |+||++|+.++ +..+ ..+||+|
T Consensus 16 ~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~~--------~~~i~--~~sgt~al~~~---l~~l~~~~gd~V 79 (373)
T 3frk_A 16 EYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCNV--------NYCIG--CGNGLDALHLI---LKGYDIGFGDEV 79 (373)
T ss_dssp HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHTS--------SEEEE--ESCHHHHHHHH---HHHTTCCTTCEE
T ss_pred CHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhCC--------CeEEE--eCCHHHHHHHH---HHHcCCCCcCEE
Confidence 456777777666542 477788999999999999964 36888 99999999985 4455 6779999
Q ss_pred EEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q psy14428 262 YFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ 341 (583)
Q Consensus 262 lv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~ 341 (583)
+++.|+|..+...++..|++++.+++ +++++++|++.+++.+ .+++++++ |+||||...+ +++|.++|++
T Consensus 80 i~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~l---~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~ 149 (373)
T 3frk_A 80 IVPSNTFIATALAVSYTGAKPIFVEP-DIRTYNIDPSLIESAI---TEKTKAII---AVHLYGQPAD---MDEIKRIAKK 149 (373)
T ss_dssp EEETTSCTHHHHHHHHHSCEEEEECE-ETTTTEECGGGTGGGC---CTTEEEEE---EECCTTCCCC---HHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEec-cccccCcCHHHHHHhc---CCCCeEEE---EECCCcCccc---HHHHHHHHHH
Confidence 99999999999999999999999999 6666888999998876 55777776 7889999876 5577888999
Q ss_pred cCeEEEEeccCCCCCC-CCCCCchHHHHHHHHhcCcEEEEecCc--ccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 342 RHLYPFFDMAYLGLTS-GDFDKDAFSLRYFAKEVGQLCLAQSFS--KNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 342 ~~i~iI~De~Y~~l~~-~~~~~~~~~~~~~~~~~~~vi~i~S~S--K~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
+|++||+|++|..... ++ .. . ... .-+++.||| |.++.+| +.|++++ ++ +++++++....
T Consensus 150 ~~~~li~D~a~~~g~~~~~---~~--~----~~~-~d~~~~S~~~~K~l~~~g-~gg~~~~--~~----~~~~~~~~~~~ 212 (373)
T 3frk_A 150 YNLKLIEDAAQAHGSLYKG---MK--V----GSL-GDAAGFSFYPAKNLGSLG-DGGAVVT--ND----KDLAEKIKALS 212 (373)
T ss_dssp HTCEEEEECTTCTTCEETT---EE--T----TSS-SSEEEEECCTTSSSCCSS-SCEEEEE--SC----HHHHHHHHHHH
T ss_pred cCCEEEEECCcccCCEECC---Ee--c----ccc-ccEEEEeCcCCCccCccc-eeEEEEe--CC----HHHHHHHHHHH
Confidence 9999999999986432 22 10 1 101 127788887 8876325 4889888 65 46777777654
No 191
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.77 E-value=1e-17 Score=177.82 Aligned_cols=182 Identities=14% Similarity=0.092 Sum_probs=139.4
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcC-CCChhhHHH---------
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHVRF--------- 274 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~-P~y~~~~~~--------- 274 (583)
..|...|++.+|++++.. ..++..|+++|++|+.++ +..++.+||+|++++ |.|..+...
T Consensus 72 ~~~~~~Le~~lA~l~g~e-------~alv~p~~~sGt~Ai~~a---l~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~ 141 (427)
T 3i16_A 72 DIGRDSLDAVYARVFNTE-------SALVRPHFVNGTHALGAA---LFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNM 141 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS-------EEEEETTCCSHHHHHHHH---HHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSS
T ss_pred HHHHHHHHHHHHHHhCCc-------ceEEeCCCccHHHHHHHH---HHHHhCCCCEEEEeCCCccHHHHHHHhccccchH
Confidence 346789999999998642 123311156778888774 455677799999999 999988744
Q ss_pred --HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCC----CCCCCCCCCCHHHHHHHHHHHHh--cCeEE
Q psy14428 275 --CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTS----SHNPTGVDLSEDQWRQLAVVVKQ--RHLYP 346 (583)
Q Consensus 275 --~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~----p~NPTG~~~s~~~~~~l~~~a~~--~~i~i 346 (583)
++..|++++.+++ ++ ++.+|++.+++.+.+ .++++++++++ |+|||| +..++++|+++|++ +++++
T Consensus 142 ~~l~~~G~~~~~v~~-~~-~g~~D~e~l~~~l~~-~~~tklV~i~~s~~~p~nptg---~i~dl~~i~~la~~~~~g~~l 215 (427)
T 3i16_A 142 GSLKEFGINYKQVDL-KE-DGKPNLEEIEKVLKE-DESITLVHIQRSTGYGWRRAL---LIEDIKSIVDCVKNIRKDIIC 215 (427)
T ss_dssp CCTGGGTCEEEECCC-CT-TSSCCHHHHHHHHHT-CTTEEEEEEECSCCSSSSCCC---CHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHcCCEEEEecC-cc-CCCcCHHHHHHHhhC-CCCCEEEEEEcCCCCCCCCcc---cHHHHHHHHHHHHHhCCCCEE
Confidence 4567999999998 44 356899999999853 15788999988 889987 45789999999999 99999
Q ss_pred EEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHHh
Q psy14428 347 FFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILIR 419 (583)
Q Consensus 347 I~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~~ 419 (583)
|+|++|..+.+.. .+. ..+..|+++|+||++|.+| .+.||+++ + ++++++++....
T Consensus 216 ivD~a~~~~~~~~---~p~-------~~gaDiv~~S~sK~lgg~g~~~gG~i~~--~-----~~li~~l~~~~~ 272 (427)
T 3i16_A 216 FVDNCYGEFMDTK---EPT-------DVGADLIAGSLIKNIGGGIAPTGGYLAG--T-----KDCIEKTSYRLT 272 (427)
T ss_dssp EEECTTTTTSSSS---CGG-------GGTCSEEEEETTSGGGTTTCCSCEEEEE--C-----HHHHHHHHHHHS
T ss_pred EEECCCccccccC---Ccc-------ccCCeEEEecCcccCCCCCCceEEEEEE--C-----HHHHHHHHHhcc
Confidence 9999999887543 111 1234689999999998666 67899999 6 689999987543
No 192
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.77 E-value=2.5e-17 Score=174.76 Aligned_cols=183 Identities=14% Similarity=0.134 Sum_probs=138.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEe-cCCchhHHHHHHHHHHHhCCCCCEEEEcC-CCChhhHH----
Q psy14428 200 HEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQ-GISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHVR---- 273 (583)
Q Consensus 200 ~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~-t~G~~~al~l~~~~l~~~~~~gd~Vlv~~-P~y~~~~~---- 273 (583)
+.|+.. |...|++.+|++++.. ..++.+ +++|++|+.++ +..++.|||+|++++ |.|..+..
T Consensus 69 y~Y~~~-g~~~Le~~lA~l~g~e--------~alv~p~~~sGt~A~~~a---l~all~pGD~Vl~~~~~~y~~~~~~~g~ 136 (427)
T 3hvy_A 69 YGYNDI-GRDSLDRVYANIFNTE--------SAFVRPHFVNGTHAIGAA---LFGNLRPNDTMMSICGMPYDTLHDIIGM 136 (427)
T ss_dssp TCTTCH-HHHHHHHHHHHHHTCS--------EEEEETTCCSHHHHHHHH---HHHTCCTTCEEEECSSSCCGGGHHHHTC
T ss_pred CCCCch-hHHHHHHHHHHHhCCC--------ceEEeCCCCcHHHHHHHH---HHHhcCCCCEEEEeCCCCchhHHHHhcc
Confidence 345444 7889999999998642 222211 56778898874 555677899999999 99998874
Q ss_pred -------HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCC----CCCCCCCCCCHHHHHHHHHHHHh-
Q psy14428 274 -------FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTS----SHNPTGVDLSEDQWRQLAVVVKQ- 341 (583)
Q Consensus 274 -------~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~----p~NPTG~~~s~~~~~~l~~~a~~- 341 (583)
.++..|++++.++. + ++++|++.+++.+.+ .++++++++++ |+|||| +..++++|+++|++
T Consensus 137 ~~~~~~~~l~~~G~~~~~v~~-~--~~~~d~e~l~~~i~~-~~~tklV~i~~s~gyp~nptg---~v~dl~~i~~ia~~~ 209 (427)
T 3hvy_A 137 DDSKKVGSLREYGVKYKMVDL-K--DGKVDINTVKEELKK-DDSIKLIHIQRSTGYGWRKSL---RIAEIAEIIKSIREV 209 (427)
T ss_dssp CTTCCSCCTGGGTCEEEECCC-B--TTBCCHHHHHHHHHH-CTTEEEEEEESSCCSSSSCCC---CHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHcCCEEEEecC-C--CCCcCHHHHHHHhhC-CCCCEEEEEECCCCCCCCccc---cHHHHHHHHHHHHHh
Confidence 34667999999987 3 368899999999853 15788999988 899987 45789999999999
Q ss_pred -cCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 342 -RHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 342 -~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
+|+++|+|++|..+.+.. .+ + ..+..|+++|+||+++.+| .+.||+++ + ++++++++...
T Consensus 210 ~~g~~livD~a~~~~~~~~---~p--~-----~~gaDiv~~S~sK~lgg~g~~~GG~i~~--~-----~~li~~l~~~~ 271 (427)
T 3hvy_A 210 NENVIVFVDNCYGEFVEEK---EP--T-----DVGADIIAGSLIKNIGGGIATTGGYIAG--K-----EEYVTQATFRV 271 (427)
T ss_dssp CSSSEEEEECTTCTTTSSS---CG--G-----GGTCSEEEEETTSGGGTTTCCSCEEEEE--C-----HHHHHHHHHHH
T ss_pred CCCCEEEEECCccccccCC---CC--c-----ccCCeEEEECCcccccccccceEEEEEE--C-----HHHHHHHHHHh
Confidence 899999999999887542 11 1 1234689999999998555 56689888 6 57888887654
No 193
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.76 E-value=6.3e-17 Score=172.36 Aligned_cols=159 Identities=14% Similarity=0.022 Sum_probs=125.3
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH----HHhhcC
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR----FCTDSR 279 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G 279 (583)
+.....+|++.+|++++. +..++ +++|++|+.++ +..++.+||+|++++|+|..+.. .++..|
T Consensus 80 ~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a---l~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G 146 (430)
T 3ri6_A 80 SNPTVEDLEQRLKNLTGA--------LGVLA--LGSGMAAISTA---ILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFG 146 (430)
T ss_dssp CCHHHHHHHHHHHHHHTC--------SEEEE--ESCHHHHHHHH---HHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTT
T ss_pred CCHHHHHHHHHHHHHHCC--------CcEEE--ECCHHHHHHHH---HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcC
Confidence 455678899999998863 22344 44557888874 44557779999999999998887 667889
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. + |++.+++++ .++++++++++|+||||.+++ +++|+++|+++|+++|+|++|....+..
T Consensus 147 ~~~~~v~~-~------d~~~l~~ai---~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~ 213 (430)
T 3ri6_A 147 IEVRFVDV-M------DSLAVEHAC---DETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE 213 (430)
T ss_dssp CEEEEECT-T------CHHHHHHHC---CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC
T ss_pred CEEEEeCC-C------CHHHHHHhh---CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 99999877 2 788888877 568999999999999999997 5577888999999999999998655432
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+ ...+..+++.|+||.++.+|..+|.+++
T Consensus 214 ----~-------~~~g~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 214 ----A-------KRLGVDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp ----G-------GGGTCSEEEEECCCEEETTEEECCEEEE
T ss_pred ----h-------HHcCCEEEEECCcccccCCCCceEEEEE
Confidence 1 1234568999999999878877777766
No 194
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.75 E-value=9.3e-18 Score=178.01 Aligned_cols=155 Identities=16% Similarity=0.110 Sum_probs=101.8
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChh---hHHHHhhcCC--eEEEEecccCCCCCCChhhHHHHHHcCCCCc
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG---HVRFCTDSRL--NVGAYRYFDNKTNGLDFAGMMEDIKAMPERS 311 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~---~~~~~~~~G~--~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~ 311 (583)
++||++|+..+ +..+..+||+|++++|+|.. +.......|. +++.++. +++++++|++.+++.+.+ .++
T Consensus 100 ~~~Gs~a~~~a---l~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~~--~~~ 173 (425)
T 3ecd_A 100 PHSGAQANGAV---MLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGV-SRDTMLIDYDQVEALAQQ--HKP 173 (425)
T ss_dssp CSSHHHHHHHH---HHHHCCTTCEEEEECC------------------CEEEEECC-CTTTSSCCHHHHHHHHHH--HCC
T ss_pred cCchHHHHHHH---HHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCC-CcccCccCHHHHHHHHhh--cCC
Confidence 67778898875 44457779999999999987 3333234444 5566666 445578999999998852 356
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccC-CCCCCCCCCCchHHHHHHHHhcCcEEEEecCccccccc
Q psy14428 312 ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY-LGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLY 390 (583)
Q Consensus 312 ~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y-~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~ 390 (583)
+++++++|+||+- ..+++|.++|+++|++||+||+| .++.+.+. ....+ +. ..+++.||||.+ +
T Consensus 174 ~~v~~~~~~~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~--~~~~~----~~--~di~~~s~sK~l--~ 238 (425)
T 3ecd_A 174 SLIIAGFSAYPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGR--HANPV----EH--AHVVTSTTHKTL--R 238 (425)
T ss_dssp SEEEEECSCCCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS--SCCGG----GT--CSEEEEESSGGG--C
T ss_pred cEEEEccccCCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhccc--ccCch----hc--CcEEEecCCccc--C
Confidence 7888889999853 34578899999999999999994 33333321 11111 11 128899999987 7
Q ss_pred CccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 391 GERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 391 GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
|.|+||+++ ++ +.+.+.+....
T Consensus 239 g~~~g~~~~--~~----~~~~~~~~~~~ 260 (425)
T 3ecd_A 239 GPRGGFVLT--ND----EEIAKKINSAV 260 (425)
T ss_dssp CCSCEEEEE--SC----HHHHHHHHHHH
T ss_pred CCCcEEEEe--CC----HHHHHHHHhhh
Confidence 889999999 64 35666666543
No 195
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.75 E-value=1.6e-18 Score=180.35 Aligned_cols=180 Identities=12% Similarity=0.026 Sum_probs=123.4
Q ss_pred CChHHHHHHHHHhccCC--------CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC-C-eEEEecCCchhHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNL--------DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDN-R-LAIVQGISGSGSLRVGTAFL 251 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~--------~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~-~-I~i~~t~G~~~al~l~~~~l 251 (583)
+++.+.+++.+.+.+.. ..+| ..+..++++++.+.+.+..|. +++ + |++ |+|+++++.++ +
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~--~~~~~~i~~--t~g~t~a~~~~---~ 85 (362)
T 2c0r_A 15 LPLEVLERAQAEFVDYQHTGMSIMEMSHR--GAVYEAVHNEAQARLLALLGN--PTGYKVLFI--QGGASTQFAMI---P 85 (362)
T ss_dssp CCHHHHHHHHHTSSSSTTSSSCGGGSCTT--SHHHHHHHHHHHHHHHHHTTC--CSSEEEEEE--SSHHHHHHHHH---H
T ss_pred CCHHHHHHHHHHHhhhhhcCccccccCCC--cHHHHHHHHHHHHHHHHHhCC--CCCcEEEEE--CCCchHHHHHH---H
Confidence 56788888877664310 1112 123455666777776665554 343 5 467 89999999985 4
Q ss_pred HHhCCCCCEEEEcCCC-Chhh-HHHHhhcCCeEEEEecccC-CCCCC--ChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC
Q psy14428 252 ERFYPGVKTVYFPTPT-WNGH-VRFCTDSRLNVGAYRYFDN-KTNGL--DFAGMMEDIKAMPERSILFLQTSSHNPTGVD 326 (583)
Q Consensus 252 ~~~~~~gd~Vlv~~P~-y~~~-~~~~~~~G~~~~~v~~~d~-~~~g~--d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~ 326 (583)
..++.+||+|++++|. |..+ ...++..| +++.+++ +. ++++. |.+.++ + .++++++++++|+||||.+
T Consensus 86 ~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~-~~~~~~~~~~~~~~~~--i---~~~t~~v~~~~~~n~tG~~ 158 (362)
T 2c0r_A 86 MNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAAS-SEASNYMTLPKLQEIQ--L---QDNAAYLHLTSNETIEGAQ 158 (362)
T ss_dssp HHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEE-CGGGTTCSCCCGGGCC--C---CTTEEEEEEESEETTTTEE
T ss_pred HhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEec-ccccccccCCCHHHcc--c---CCCcCEEEEeCCcCcccee
Confidence 4556779999988776 5443 46677789 9999988 42 22343 544432 3 5689999999999999997
Q ss_pred CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 327 LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 327 ~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
++ ++++| +++++|+|++|..+... . .+ ... .+++.|+||.+|++| +||+++
T Consensus 159 ~~--~l~~i------~~~~vivD~a~~~~~~~-----~-~~----~~~--d~~~~s~~K~~g~~G--~G~l~~ 209 (362)
T 2c0r_A 159 FK--AFPDT------GSVPLIGDMSSDILSRP-----F-DL----NQF--GLVYAGAQKNLGPSG--VTVVIV 209 (362)
T ss_dssp CS--SCCCC------TTSCEEEECTTTTTSSC-----C-CG----GGC--SEEEEETTTTTCCSS--CEEEEE
T ss_pred cc--ccccc------CCCEEEEEChhhccCCc-----c-ch----hHC--cEEEEeccccccCcC--cEEEEE
Confidence 65 34444 89999999999876432 1 11 222 377789999999889 999999
No 196
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.75 E-value=3.6e-17 Score=172.80 Aligned_cols=192 Identities=15% Similarity=0.106 Sum_probs=146.6
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-----hhcC
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-----TDSR 279 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-----~~~G 279 (583)
.....+|++.++++... ++.++ +++|++|+..+ + .+..+||+|++++|+|......+ +..|
T Consensus 66 ~p~~~~l~~~la~l~g~--------~~~~~--~~sG~~Ai~~~---~-~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g 131 (400)
T 3nmy_A 66 NPTRFAYERCVAALEGG--------TRAFA--FASGMAATSTV---M-ELLDAGSHVVAMDDLYGGTFRLFERVRRRTAG 131 (400)
T ss_dssp CHHHHHHHHHHHHHHTC--------SEEEE--ESSHHHHHHHH---H-TTSCTTCEEEEESSCCHHHHHHHHHTHHHHHC
T ss_pred CHHHHHHHHHHHHHhCC--------CCEEE--ecCHHHHHHHH---H-HHcCCCCEEEEeCCCchHHHHHHHHhhHhhcC
Confidence 33457888899988753 24555 56668898863 3 35667999999999999665554 3459
Q ss_pred CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCC
Q psy14428 280 LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGD 359 (583)
Q Consensus 280 ~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~ 359 (583)
++++.++. + |++.+++.+ .++++++++++|+||||.+++ +++|+++|+++|+++|+||+|....+..
T Consensus 132 ~~~~~v~~-~------d~~~l~~~i---~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~ 198 (400)
T 3nmy_A 132 LDFSFVDL-T------DPAAFKAAI---RADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR 198 (400)
T ss_dssp CEEEEECT-T------SHHHHHHHC---CTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC
T ss_pred eEEEEECC-C------CHHHHHHHh---ccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 99998876 2 788888877 568899999999999999997 7788899999999999999996432221
Q ss_pred CCCchHHHHHHHHhcCcEEEEecCcccccccCccceE-EEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 360 FDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT-FSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~-lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+ ...+..+++.|+||.++.+|.++|. +++. .+ +++++++.........+.+++.++++...++
T Consensus 199 ------~-----~~~g~div~~S~sK~l~g~g~~~gG~~vv~-~~----~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~ 262 (400)
T 3nmy_A 199 ------P-----LSLGADLVVHSATKYLNGHSDMVGGIAVVG-DN----AELAEQMAFLQNSIGGVQGPFDSFLALRGLK 262 (400)
T ss_dssp ------G-----GGGTCSEEEEETTTTTTCSSSCCCEEEEEC-SC----HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHT
T ss_pred ------h-----hhcCCcEEEecCccccCCCCCcceeEEEEe-CC----HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHh
Confidence 1 1124679999999999989999988 4442 33 5788888887777777888888888877776
Q ss_pred C
Q psy14428 439 D 439 (583)
Q Consensus 439 ~ 439 (583)
.
T Consensus 263 ~ 263 (400)
T 3nmy_A 263 T 263 (400)
T ss_dssp T
T ss_pred H
Confidence 5
No 197
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.74 E-value=2e-17 Score=178.16 Aligned_cols=214 Identities=14% Similarity=0.088 Sum_probs=142.2
Q ss_pred CCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCch
Q psy14428 162 HPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGS 241 (583)
Q Consensus 162 ~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~ 241 (583)
....++++.|...-++....+.+.+.+++.+.+..+ ...|.+..|..+||++++++++. +++++ |+|++
T Consensus 31 g~~~~~~~~~~~ylD~~~~~~~~~v~~a~~~~l~~~-~~~y~~~~~~~~l~~~la~~~~~--------~~v~~--t~~gt 99 (467)
T 2oqx_A 31 GMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRG-DEAYSGSRSYYALAESVKNIFGY--------QYTIP--THQGR 99 (467)
T ss_dssp TSCGGGSCGGGCSEECSCCSSCSCCCHHHHHHTTSC-CCCSSSCHHHHHHHHHHHHHHCC--------SEEEE--EC--C
T ss_pred CCCceeccCCCeeEecccCCCcHHHHHHHHHHhccC-cceeccCchhHHHHHHHHHHhCc--------CcEEE--cCCcH
Confidence 344566666543111111111155666666655433 34688888999999999999953 58999 99999
Q ss_pred hHHHHHHHHHHHhCCC-----C----CEEEEcCCCChhhHHHHhhcCCeEEEEecc---cC-----CCCCCChhhHHHHH
Q psy14428 242 GSLRVGTAFLERFYPG-----V----KTVYFPTPTWNGHVRFCTDSRLNVGAYRYF---DN-----KTNGLDFAGMMEDI 304 (583)
Q Consensus 242 ~al~l~~~~l~~~~~~-----g----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~---d~-----~~~g~d~~~l~~~l 304 (583)
+|+.++..+ +..+ | |.|++..+.|..+.......|+.++..... +. .++.+|++.+++.+
T Consensus 100 ~A~~~al~~---~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i 176 (467)
T 2oqx_A 100 GAEQIYIPV---LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGI 176 (467)
T ss_dssp CSHHHHHHH---HHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHH
T ss_pred HHHHHHHHH---HhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHH
Confidence 999986433 3345 6 888887656666666677777776654210 11 23457999999998
Q ss_pred HcCC-CCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCeEEEEeccCCC----------CCCCCCCCchHHHHHHH-
Q psy14428 305 KAMP-ERSILFLQTSSHNPT-GVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG----------LTSGDFDKDAFSLRYFA- 371 (583)
Q Consensus 305 ~~~~-~~~~~i~i~~p~NPT-G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~----------l~~~~~~~~~~~~~~~~- 371 (583)
.... ++++++++++||||| |.+++.+++++|+++|++||++||+|++... ..+.+ .+ ...+.
T Consensus 177 ~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g--~~---~~~~~~ 251 (467)
T 2oqx_A 177 EEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKD--WT---IEQITR 251 (467)
T ss_dssp HHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTT--SC---HHHHHH
T ss_pred HhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccC--cc---HHHHhh
Confidence 5321 367889999999998 8999999999999999999999999944321 23333 12 22222
Q ss_pred ---HhcCcEEEEecCccccccc-CccceEEEE
Q psy14428 372 ---KEVGQLCLAQSFSKNMGLY-GERVGTFSV 399 (583)
Q Consensus 372 ---~~~~~vi~i~S~SK~~~l~-GlRiG~lv~ 399 (583)
...+ + ++.|+||.+++| | ||+++
T Consensus 252 ~~~~~~d-~-~~~s~sK~~g~~~G---g~~~~ 278 (467)
T 2oqx_A 252 ETYKYAD-M-LAMSAKKDAMVPMG---GLLCM 278 (467)
T ss_dssp HHGGGCS-E-EEEESSSTTCCSSC---EEEEE
T ss_pred hhhccCC-e-EEEecccccCCCCc---eEEEe
Confidence 2223 3 478999999877 4 77777
No 198
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.73 E-value=8.6e-18 Score=180.36 Aligned_cols=264 Identities=13% Similarity=0.069 Sum_probs=157.7
Q ss_pred CChHHHHHHHHHhccCCCCCCCCC---CCCHHHH--HHHH-HHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANI---GGDAKFC--KLAA-QLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~---~G~~~Lr--~aia-~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~ 255 (583)
+++.+.+++.+.+.+....+|+.. .|.+.++ ++++ +++.+..|.+ .. .++ +++|++|+..+ +..+.
T Consensus 57 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~--~~-~v~--~~sGs~a~~~a---~~~~~ 128 (447)
T 3h7f_A 57 VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAE--FA-NVQ--PHSGAQANAAV---LHALM 128 (447)
T ss_dssp CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS--EE-ECC--CSSHHHHHHHH---HHHHC
T ss_pred CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCC--ce-EEE--eCCHHHHHHHH---HHHhc
Confidence 367888887766643222334332 3554444 4444 4444333332 22 332 45567788774 45567
Q ss_pred CCCCEEEEcCCCChhhH-H--H--HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q psy14428 256 PGVKTVYFPTPTWNGHV-R--F--CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330 (583)
Q Consensus 256 ~~gd~Vlv~~P~y~~~~-~--~--~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~ 330 (583)
.+||+|++++|+|..+. . . +...+.+++++++ +++++.+|++.+++.+.. .+++++++++|+||++.
T Consensus 129 ~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~~--~~~~~i~~~~~~~~~~~----- 200 (447)
T 3h7f_A 129 SPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGV-DPATHLIDMDAVRATALE--FRPKVIIAGWSAYPRVL----- 200 (447)
T ss_dssp CTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECC-CTTTCSCCHHHHHHHHHH--HCCSEEEEECSSCCSCC-----
T ss_pred CCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCc-CcccCCcCHHHHHHHHHh--cCCeEEEEcCCCCCCcc-----
Confidence 78999999999987621 1 1 2223556777777 555567999999998853 24568888899999986
Q ss_pred HHHHHHHHHHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHH
Q psy14428 331 QWRQLAVVVKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETER 409 (583)
Q Consensus 331 ~~~~l~~~a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~ 409 (583)
++++|.++|+++|++||+||+|. ++.+.+. ...++ + ..-+++.|+||++ +|+|.||+++ + ++
T Consensus 201 ~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~--~~~~~----~--~~di~~~s~sK~l--~G~~gG~i~~--~-----~~ 263 (447)
T 3h7f_A 201 DFAAFRSIADEVGAKLLVDMAHFAGLVAAGL--HPSPV----P--HADVVSTTVHKTL--GGGRSGLIVG--K-----QQ 263 (447)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCST----T--TCSEEEEESSGGG--CCCSCEEEEE--C-----GG
T ss_pred CHHHHHHHHHHcCCEEEEECCchhhhhcCCC--CCCCC----C--CCcEEEecCCcCC--CCCCeEEEEE--C-----HH
Confidence 67889999999999999999963 3333321 01011 1 1237799999987 5899999999 6 36
Q ss_pred HHHHHHHHHhccccC-CChHHHHHHHHHh---CChhhhhhhhhHHHHHHHHHHHHhh------ccCCC--ccchhhHHHH
Q psy14428 410 IMSQLKILIRGFYSN-PPIHGARIVTEIL---SDPKLKAQCDETERIMSQLKILIRG------FYSNP--PIHGARIVTE 477 (583)
Q Consensus 410 li~~l~~~~~~~~~~-~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~l~~~~r~------~~~~~--p~~g~~i~~~ 477 (583)
+++.+.........+ ++...+.+++..+ .+.+++...++..+..+.+.+.++. .+... +..+.++|+.
T Consensus 264 ~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (447)
T 3h7f_A 264 YAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVD 343 (447)
T ss_dssp GHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEE
T ss_pred HHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEE
Confidence 777777664443333 3333233333322 3334444444444444444443332 23332 2455566654
Q ss_pred h
Q psy14428 478 I 478 (583)
Q Consensus 478 ~ 478 (583)
+
T Consensus 344 ~ 344 (447)
T 3h7f_A 344 L 344 (447)
T ss_dssp C
T ss_pred c
Confidence 4
No 199
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.73 E-value=2.8e-17 Score=178.14 Aligned_cols=206 Identities=13% Similarity=0.096 Sum_probs=142.6
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCC------CCCCCCCHHHHHHHHHHHhCCCCCCCCC--CCeEE
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHE------YANIGGDAKFCKLAAQLAYGEDFPAFKD--NRLAI 234 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~------Y~~~~G~~~Lr~aia~~~~~~~g~~~~~--~~I~i 234 (583)
.+.|+|..++. ++++.+.+++.+.+.+....+ |....+..++++++.+++.+.+|.+.+. .+|++
T Consensus 44 ~~~i~L~a~e~-------~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~ 116 (483)
T 1rv3_A 44 RVGLELIASEN-------FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQP 116 (483)
T ss_dssp HSSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCC
T ss_pred hcCeEEEcCCC-------CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEE
Confidence 35688876653 156888888877765421112 3334456788888878887777765322 34888
Q ss_pred EecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH--------HhhcC--CeEEEEecccCCCCCCChhhHHHHH
Q psy14428 235 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF--------CTDSR--LNVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 235 ~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~--------~~~~G--~~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
++|+ +++..+ +..++.|||+|++++|+|..+... +...| .+++++++ +++++.+|++.+++.+
T Consensus 117 --~sGs-~an~~~---~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~-~~~~~~iD~d~le~~i 189 (483)
T 1rv3_A 117 --YSGS-PANFAV---YTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV-NPDTGYIDYDRLEENA 189 (483)
T ss_dssp --SSHH-HHHHHH---HHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB-CTTTCSBCHHHHHHHH
T ss_pred --CCcH-HHHHHH---HHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc-ccCCCcCCHHHHHHHH
Confidence 8888 677663 344567799999999998877532 23334 55666665 5456789999999998
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecC
Q psy14428 305 KAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 305 ~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
.+ .+++++++ +++||+ .+++ +++|.++|+++|++||+|++|. ++.+.+. ...++ . ...+++.|+
T Consensus 190 ~~--~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~--~~~p~----~--~~div~~s~ 254 (483)
T 1rv3_A 190 RL--FHPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGV--VPSPF----E--HCHVVTTTT 254 (483)
T ss_dssp HH--HCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTS--SCCGG----G--TCSEEEEES
T ss_pred hh--cCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCC--CCCCC----C--CCcEEEecC
Confidence 52 45678888 899999 7777 6677889999999999999975 3333221 11111 1 234788999
Q ss_pred cccccccCccceEEEE
Q psy14428 384 SKNMGLYGERVGTFSV 399 (583)
Q Consensus 384 SK~~~l~GlRiG~lv~ 399 (583)
||++ +|+|.||+++
T Consensus 255 ~K~l--~GprgG~i~~ 268 (483)
T 1rv3_A 255 HKTL--RGCRAGMIFY 268 (483)
T ss_dssp SGGG--CCCSCEEEEE
T ss_pred cccC--CCCCceEEEE
Confidence 9987 6999999999
No 200
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.73 E-value=2.7e-16 Score=168.09 Aligned_cols=183 Identities=11% Similarity=-0.053 Sum_probs=139.6
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh--------
Q psy14428 183 LPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-------- 254 (583)
Q Consensus 183 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-------- 254 (583)
.+.+.+++.+.+.. ..|.+..+..+||+++|++++.. ++++ +++|++|+.++ +..+
T Consensus 42 ~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~g~~--------~~i~--~~sGt~a~~~a---l~~l~~~~~~~~ 105 (437)
T 3bb8_A 42 GTKELQLMVEASLD---GWLTTGRFNDAFEKKLGEYLGVP--------YVLT--TTSGSSANLLA---LTALTSPKLGVR 105 (437)
T ss_dssp CHHHHHHHHHHHHH---CCCBSCHHHHHHHHHHHHHHTCS--------EEEE--ESCHHHHHHHH---HHHTTCGGGGGG
T ss_pred CHHHHHHHHHHHHc---CCcCCChHHHHHHHHHHHHHCCC--------cEEE--eCCHHHHHHHH---HHHhhhcccccc
Confidence 35666666665543 24667778999999999999642 4566 67777899885 3444
Q ss_pred -CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeC-CCCCCCCCCCCHHHH
Q psy14428 255 -YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQT-SSHNPTGVDLSEDQW 332 (583)
Q Consensus 255 -~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~-~p~NPTG~~~s~~~~ 332 (583)
..+||+|+++.|+|..+...++..|++++.+++ +++++.+|++.+++.+ .+++++++++ +|+|| ..+
T Consensus 106 ~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~i---~~~~~~v~~~~~~g~~-------~~~ 174 (437)
T 3bb8_A 106 ALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDV-DIPTYNVNASLIEAAV---SDKTKAIMIAHTLGNL-------FDL 174 (437)
T ss_dssp SCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCE-ETTTTEECGGGHHHHC---CTTEEEEEEECGGGCC-------CCH
T ss_pred cCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec-cCccCCcCHHHHHHhc---CCCCeEEEEeCCCCCh-------hcH
Confidence 567999999999999999999999999999998 5545788999998887 5578888886 57777 357
Q ss_pred HHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCC
Q psy14428 333 RQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPT 403 (583)
Q Consensus 333 ~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~ 403 (583)
++|.++|++++++||+|++|......+. . .+ ..... +++.||||.++++|.|.|++++ ++
T Consensus 175 ~~i~~l~~~~~~~li~D~a~~~g~~~~~--~--~~----~~~~d-~~~~s~~~~k~l~~g~gg~~~~--~~ 234 (437)
T 3bb8_A 175 AEVRRVADKYNLWLIEDCCDALGSTYDG--K--MA----GTFGD-IGTVSFYPAKHITMGEGGAVFT--QS 234 (437)
T ss_dssp HHHHHHHHHHTCEEEEECTTCTTCEETT--E--ET----TSSSS-EEEEECSTTSSSCCSSCEEEEE--SC
T ss_pred HHHHHHHHHcCCEEEEECccccCceECC--e--ec----ccccC-EEEEECcCCcCCCCCCeEEEEe--CC
Confidence 8889999999999999999984332120 1 01 11122 6778999999999999999999 64
No 201
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.72 E-value=5.3e-17 Score=174.95 Aligned_cols=164 Identities=13% Similarity=0.081 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC---CEEEEcCCCChhhHH----HHhhcCCe
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV---KTVYFPTPTWNGHVR----FCTDSRLN 281 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g---d~Vlv~~P~y~~~~~----~~~~~G~~ 281 (583)
..+|+.++++++ .++++|++ |+|+++++.++ +..+..+| ++|++++|+|+.... .++..|++
T Consensus 114 ~~l~~~la~~~g------~~~~~v~~--t~g~t~al~~~---~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~ 182 (465)
T 3e9k_A 114 ESIVGLMKDIVG------ANEKEIAL--MNALTVNLHLL---MLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLN 182 (465)
T ss_dssp HHHHGGGHHHHT------CCGGGEEE--CSCHHHHHHHH---HHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcC------CCcCCEEE--ECCHHHHHHHH---HHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCc
Confidence 668889998875 34789999 99999999985 44454444 459999999988444 56668987
Q ss_pred EE----E-EecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCC
Q psy14428 282 VG----A-YRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLT 356 (583)
Q Consensus 282 ~~----~-v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~ 356 (583)
++ . +|. + +++.+|++.+++.+++..++++++++++||||||.+++. ++|.++|+++|++||+|+++..-.
T Consensus 183 ~~~~~v~~~~~-~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l---~~i~~la~~~g~~vi~D~a~~~g~ 257 (465)
T 3e9k_A 183 IEESMRMIKPR-E-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNI---PAITKAGQAKGCYVGFDLAHAVGN 257 (465)
T ss_dssp HHHHEEEECCC-T-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCH---HHHHHHHHHTTCEEEEECTTTTTT
T ss_pred ceeeeEEEecC-C-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecH---HHHHHHHHHcCCEEEEEhhhhcCC
Confidence 52 2 233 2 346789999999996433578999999999999999984 667888999999999999987433
Q ss_pred CCCCCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEE
Q psy14428 357 SGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSV 399 (583)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~ 399 (583)
.. ..+.. .+..+++.|++|.++ .|| ++|++++
T Consensus 258 ~~------~~~~~----~~~D~~~~s~~K~l~~gp~-~~g~l~~ 290 (465)
T 3e9k_A 258 VE------LYLHD----WGVDFACWCSYKYLNAGAG-GIAGAFI 290 (465)
T ss_dssp SC------CCHHH----HTCCEEEECSSSTTCCCTT-CCCEEEE
T ss_pred cC------Cchhh----cCCCEEEECcccccccCCC-ceEEEEE
Confidence 21 12222 245588999999994 244 8999999
No 202
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.72 E-value=8.6e-17 Score=170.29 Aligned_cols=205 Identities=16% Similarity=0.133 Sum_probs=123.7
Q ss_pred CChHHHHHHHHHhccCCCCC------CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC
Q psy14428 182 VLPSVKEAERRIYEKNLDHE------YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~------Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~ 255 (583)
+++.+.+++.+.+.+....+ |........+++...+++.+..+ +++++|++ ++| ++++.++ +..+.
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~--~sG-s~a~~~a---~~~~~ 113 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQP--HSG-SQANFAV---YTALL 113 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCC--SSH-HHHHHHH---HHHHC
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEe--cCc-HHHHHHH---HHHhc
Confidence 45788888877663321112 22233334444433333333223 35677877 777 6788874 45567
Q ss_pred CCCCEEEEcCCCChhhH---HHHhh--cCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q psy14428 256 PGVKTVYFPTPTWNGHV---RFCTD--SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSED 330 (583)
Q Consensus 256 ~~gd~Vlv~~P~y~~~~---~~~~~--~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~ 330 (583)
.+||+|++++|+|..+. ..... .+...+.++. + +++.+|++.+++.+.. .+++++++++|+||+ ..+
T Consensus 114 ~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~~~--~~~-- 185 (420)
T 3gbx_A 114 QPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGI-D-ESGKIDYDEMAKLAKE--HKPKMIIGGFSAYSG--VVD-- 185 (420)
T ss_dssp CTTCEEEEEEEC------------CHHHHSEEEEEEE-C-TTCSCCHHHHHHHHHH--HCCSEEEECCTTCCS--CCC--
T ss_pred CCCCEEEecchhhcceeccchhhhhcccceeEEeccC-C-ccCCcCHHHHHHHHHh--cCCeEEEEecCccCC--ccC--
Confidence 77999999999998743 22222 3445666676 4 4467899999998853 246788888999985 444
Q ss_pred HHHHHHHHHHhcCeEEEEeccCCC-CCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHH
Q psy14428 331 QWRQLAVVVKQRHLYPFFDMAYLG-LTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETER 409 (583)
Q Consensus 331 ~~~~l~~~a~~~~i~iI~De~Y~~-l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~ 409 (583)
+++|.++|+++|++||+||+|.. +...+. ....+ ....|++.|+||.++ |.|.||+++ ++.. +.
T Consensus 186 -l~~l~~l~~~~~~~li~De~~~~~~~~~~~--~~~~~------~~~di~~~s~sK~~~--g~~gg~~~~--~~~~--~~ 250 (420)
T 3gbx_A 186 -WAKMREIADSIGAYLFVDMAHVAGLIAAGV--YPNPV------PHAHVVTTTTHKTLA--GPRGGLILA--KGGD--EE 250 (420)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTHHHHHTTS--SCCST------TTSSEEEEESSGGGC--SCSCEEEEE--SSCC--HH
T ss_pred -HHHHHHHHHHcCCEEEEECCcchhceeccc--CCccc------ccCCEEEeecccCCC--CCCceEEEE--cCCc--HH
Confidence 77889999999999999999753 222210 00011 123488999999985 677799999 6310 14
Q ss_pred HHHHHHHH
Q psy14428 410 IMSQLKIL 417 (583)
Q Consensus 410 li~~l~~~ 417 (583)
+++.+...
T Consensus 251 ~~~~~~~~ 258 (420)
T 3gbx_A 251 LYKKLNSA 258 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHhhhh
Confidence 66665543
No 203
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.71 E-value=1.2e-16 Score=168.37 Aligned_cols=265 Identities=14% Similarity=0.129 Sum_probs=165.1
Q ss_pred ChHHHHHHHHHhccCCCCCCCC------CCCCHHHH----HHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHH
Q psy14428 183 LPSVKEAERRIYEKNLDHEYAN------IGGDAKFC----KLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLE 252 (583)
Q Consensus 183 ~~~v~~a~~~~~~~~~~~~Y~~------~~G~~~Lr----~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~ 252 (583)
++.+.+++.+.+.+....+|+. .....+|+ ++++++++. ++++|++ ++| ++++.++ +.
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~------~~~~i~~--~sG-t~a~~~a---~~ 103 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA------EHANVQP--HSG-AQANMAV---YF 103 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC------SEEECCC--SSH-HHHHHHH---HH
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC------CceEEEe--cCc-HHHHHHH---HH
Confidence 5788888777664211122221 12234454 577777742 2455666 777 9999985 44
Q ss_pred HhCCCCCEEEEcCCCChhhHH-H--HhhcC--CeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCC
Q psy14428 253 RFYPGVKTVYFPTPTWNGHVR-F--CTDSR--LNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327 (583)
Q Consensus 253 ~~~~~gd~Vlv~~P~y~~~~~-~--~~~~G--~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~ 327 (583)
.+..+||+|++++|+|..+.. . +...| .+++.+++ +++++.+|++.+++.+... +++++++ +|+|+ |...
T Consensus 104 ~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~~~--~~~~v~~-~~~~~-~~~~ 178 (405)
T 2vi8_A 104 TVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGV-DPETHVIDYDDVREKARLH--RPKLIVA-AAAAY-PRII 178 (405)
T ss_dssp HHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECB-CTTTCSBCHHHHHHHHHHH--CCSEEEE-CCSSC-CSCC
T ss_pred HhcCCCCEEEEecccccchhcccchhhhccceeEEEeccc-ccccCCcCHHHHHHHHHhc--CCeEEEE-eCCCC-CccC
Confidence 456679999999999987753 1 12334 47888877 5455789999999988531 4556665 55554 3333
Q ss_pred CHHHHHHHHHHHHhcCeEEEEeccCCCCCC-CCCCCchHHHHHHHHhcCcEEEEecCccccc-ccCccceEEEEEcCCch
Q psy14428 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTS-GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMG-LYGERVGTFSVLTPTSD 405 (583)
Q Consensus 328 s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~-~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~-l~GlRiG~lv~~~p~~~ 405 (583)
+ +++|.++|+++|++||+||+|..... .+. .... + +. ..+++.||||.++ ++| ||+++ +
T Consensus 179 ~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~~~~---~-~~--~di~~~s~sK~~~g~~g---G~~~~--~--- 239 (405)
T 2vi8_A 179 D---FAKFREIADEVGAYLMVDMAHIAGLVAAGL--HPNP---V-PY--AHFVTTTTHKTLRGPRG---GMILC--Q--- 239 (405)
T ss_dssp C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCS---T-TT--CSEEEEESSSTTCCCSC---EEEEE--C---
T ss_pred C---HHHHHHHHHHcCCEEEEEccccccccccCc--CCCc---c-cc--CCEEEEeccccCCCCCC---eEEEE--c---
Confidence 3 68889999999999999999984322 111 1111 1 11 2288999999997 666 99999 6
Q ss_pred hHHHHHHHHHHHHhccccCCChHHHHHH-HHHhCChhhhhhhhhHHHHHHHHHHHHhhccCCCccchhhHHHHhcCChhH
Q psy14428 406 ETERIMSQLKILIRGFYSNPPIHGARIV-TEILSDPKLKAQCDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKL 484 (583)
Q Consensus 406 ~~~~li~~l~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~~~~~p~~g~~i~~~~l~~~~~ 484 (583)
+++++++.........+.+.+.|.++ ...++.-
T Consensus 240 --~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~-------------------------------------------- 273 (405)
T 2vi8_A 240 --EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEA-------------------------------------------- 273 (405)
T ss_dssp --HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--------------------------------------------
T ss_pred --HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHH--------------------------------------------
Confidence 47888887654333333333333332 2222110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc-cccceeecCCCh
Q psy14428 485 KAQWFEECKGMSNRISSIREELKSKILDKGSKKNWDHITN-QKGMFCYTGLSA 536 (583)
Q Consensus 485 ~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~pg~~~~~~~-~~g~f~~~~l~~ 536 (583)
....++++++++.++++.+.+.|++.+ +....+ ..+.+.|..++.
T Consensus 274 ---~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~ 319 (405)
T 2vi8_A 274 ---LQDDFKAYAKRVVDNAKRLASALQNEG----FTLVSGGTDNHLLLVDLRP 319 (405)
T ss_dssp ---HSHHHHHHHHHHHHHHHHHHHHHHHTT----CEEGGGSCSSSEEEEECGG
T ss_pred ---HhhhHHHHHHHHHHHHHHHHHHHHhCC----CeEecCCCCceEEEEEccC
Confidence 001245566777888888888888763 444443 457777877653
No 204
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.71 E-value=3.9e-16 Score=163.66 Aligned_cols=217 Identities=12% Similarity=0.023 Sum_probs=151.4
Q ss_pred CChHHHHHHHHHhccCCCCCCCC-CCCCHHHHHHH-HHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-CCCC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYAN-IGGDAKFCKLA-AQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-YPGV 258 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~-~~G~~~Lr~ai-a~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~~~g 258 (583)
+++.+.+++.+.+..+. |.+ .....+|++++ |++++. .+++++ ++||++|+.++ +..+ ..+|
T Consensus 14 ~~~~i~~a~~~~~~~~~---~~~~~~~~~~l~~~~~a~~~g~-------~~~~v~--~~sgt~al~~a---l~~l~~~~G 78 (377)
T 3ju7_A 14 PVIEYLDELKEIDASHI---YTNYGPINQRFEQTIMSGFFQN-------RGAVTT--VANATLGLMAA---IQLKKRKKG 78 (377)
T ss_dssp CGGGGHHHHHHHHHHTC---CSSSCHHHHHHHHHHHHHTSTT-------CSEEEE--ESCHHHHHHHH---HHHHSCTTC
T ss_pred CcHHHHHHHHHHHHcCC---cccCCHHHHHHHHHHHHHHhCC-------CCeEEE--eCCHHHHHHHH---HHHcCCCCc
Confidence 45677777777776532 332 34578999999 998751 346777 88999999885 3334 6779
Q ss_pred CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 259 KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 259 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
|+|++++|+|..+...++..|++++.+++ +++++.+|++.+++++.....++++++ |+||||...+ +++|.++
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~l 151 (377)
T 3ju7_A 79 KYALMPSFTFPATPLAAIWCGLEPYFIDI-SIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEEL 151 (377)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEec-CCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHH
Confidence 99999999999999999999999999999 666788999999998732112377776 7889999887 4566777
Q ss_pred HHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEec--CcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 339 VKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQS--FSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 339 a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S--~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
|+ +|++||+|+++......+. . .+ ..... -+.+.| .+|.++ +| +.|++++ ++ ++++++++.
T Consensus 152 a~-~~~~vi~D~a~a~g~~~~~--~--~~---g~~~~-d~~~~S~~~~K~l~-~g-~gG~~~~--~~----~~l~~~~~~ 214 (377)
T 3ju7_A 152 EK-KGVPVVVDAAPGFGLMNGG--M--HY---GQDFS-GMIIYSFHATKPFG-IG-EGGLIYS--KN----EEDIQRIKR 214 (377)
T ss_dssp HH-TTCCBEEECTTCTTCEETT--E--ET---TTTCS-SEEEEECBTTSSSC-CB-SCEEEEE--SC----HHHHHHHHH
T ss_pred Hh-cCCEEEEECCCccCCeECC--E--ec---cCCCC-cEEEEECCCCCcCC-CC-CcEEEEE--CC----HHHHHHHHH
Confidence 88 9999999999875432110 0 01 00011 134445 469998 45 7889888 65 478888776
Q ss_pred HHhc------------cccCCChHHHHHHHHHh
Q psy14428 417 LIRG------------FYSNPPIHGARIVTEIL 437 (583)
Q Consensus 417 ~~~~------------~~~~~s~~~q~~~~~~l 437 (583)
.... ..+..+.+.+.+....+
T Consensus 215 ~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l 247 (377)
T 3ju7_A 215 MGNFGFDTNRECTMMGFNCKMSEYAAAIGIATM 247 (377)
T ss_dssp HTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHH
T ss_pred HHhcCCCCCCceeeccccCCCCHHHHHHHHHHH
Confidence 6432 12345566555554444
No 205
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.71 E-value=5.2e-17 Score=174.48 Aligned_cols=257 Identities=11% Similarity=-0.038 Sum_probs=172.0
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCeEEEecCCchhHHHHHHHHHHH-hC--
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD---NRLAIVQGISGSGSLRVGTAFLER-FY-- 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~---~~I~i~~t~G~~~al~l~~~~l~~-~~-- 255 (583)
+.+.+.+++.+.+..+ ..+|....|..++++++.+++.+..|.+.+. ..+++ |+|+++|+.++...+.. ..
T Consensus 54 ~~~~v~e~~~~a~~~~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~--t~ggtea~~~al~a~~~~~~~~ 130 (452)
T 2dgk_A 54 DDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN--TIGSSEACMLGGMAMKWRWRKR 130 (452)
T ss_dssp CCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccC-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEE--eCCHHHHHHHHHHHHHHHHHHH
Confidence 4467888877766442 3457677788899999988888777765332 24888 99999999886333221 00
Q ss_pred --CCC-----CEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q psy14428 256 --PGV-----KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS 328 (583)
Q Consensus 256 --~~g-----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s 328 (583)
.+| ++|++++ +|..+...++..|++++.+|+ +++++.+|++.+++.+ .++++++++++|+||||.+.+
T Consensus 131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~-~~~~~~~d~~~l~~~i---~~~t~~v~~~~~~n~tG~~~~ 205 (452)
T 2dgk_A 131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM-RPGQLFMDPKRMIEAC---DENTIGVVPTFGVTYTGNYEF 205 (452)
T ss_dssp HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCC-BTTBCSCCHHHHHHHC---CTTEEEEECBBSCTTTCBBCC
T ss_pred HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEec-CCCCCeECHHHHHHHH---hhCCEEEEEEcCCcCCcccCC
Confidence 024 6999999 999999999999999999998 5445789999999988 567899999999999999976
Q ss_pred HHHHHHHHHHHHhc------CeEEEEeccCCCCCC---CCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 329 EDQWRQLAVVVKQR------HLYPFFDMAYLGLTS---GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 329 ~~~~~~l~~~a~~~------~i~iI~De~Y~~l~~---~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
+++|.++|+++ ++++++|++|..+.. .+. ....+ ...+-.++..|++| +++.|.|+||+++
T Consensus 206 ---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~--~~~~~----~~~~~d~~~~~~hK-~~~~~~~~G~~~~ 275 (452)
T 2dgk_A 206 ---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPD--IVWDF----RLPRVKSISASGHK-FGLAPLGCGWVIW 275 (452)
T ss_dssp ---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTT--CCCST----TSTTEEEEEEETTT-TTCCCSSCEEEEE
T ss_pred ---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCcc--chhhc----CCCCCcEEEECccc-ccCCCCCeEEEEE
Confidence 55667778884 999999999998753 110 00000 11123456778899 6679999999999
Q ss_pred EcCCchhHHHHHHHHHHHHhcc------------ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 400 LTPTSDETERIMSQLKILIRGF------------YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 400 ~~p~~~~~~~li~~l~~~~~~~------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
.+++ .+.+.+....... ......+.|+++...+....+++..++..+....+.+.++
T Consensus 276 --~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~ 344 (452)
T 2dgk_A 276 --RDEE---ALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIA 344 (452)
T ss_dssp --SSGG---GSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cCHH---HHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6432 1123321111110 0011455677777666555555555554444444444443
No 206
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.69 E-value=1.4e-15 Score=159.79 Aligned_cols=192 Identities=14% Similarity=0.110 Sum_probs=137.4
Q ss_pred CCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-----
Q psy14428 180 PYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF----- 254 (583)
Q Consensus 180 p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~----- 254 (583)
+..++.+.+++.+.+.. ..|.+..+..+||+++|++++.. ++++ +++|++|+.++ +..+
T Consensus 11 ~~~~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~~~~--------~~i~--~~sGt~a~~~a---l~~~~~~~~ 74 (390)
T 3b8x_A 11 STWDDLEYKAIQSVLDS---KMFTMGEYVKQYETQFAKTFGSK--------YAVM--VSSGSTANLLM---IAALFFTKK 74 (390)
T ss_dssp CCCCHHHHHHHHHHHHH---TCCSSCHHHHHHHHHHHHHHTCS--------EEEE--ESCHHHHHHHH---HHHTTSSSS
T ss_pred CCCCHHHHHHHHHHHHc---CCCCCChHHHHHHHHHHHHHCCC--------cEEE--ECCHHHHHHHH---HHHHHhhhh
Confidence 34567777887777654 24667888999999999999642 3455 66666888885 4444
Q ss_pred --CCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCC-CCCCCCCCCCHHH
Q psy14428 255 --YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTS-SHNPTGVDLSEDQ 331 (583)
Q Consensus 255 --~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~-p~NPTG~~~s~~~ 331 (583)
..+||+|+++.|+|..+...++..|++++.+++ +++++.+|++.+++.+ .+++++++++| ++|| ..
T Consensus 75 ~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i---~~~~~~v~~~~~~g~~-------~~ 143 (390)
T 3b8x_A 75 PRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDI-DINTLNIDIESLKEAV---TDSTKAILTVNLLGNP-------NN 143 (390)
T ss_dssp CSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHHHHC---CTTEEEEEEECGGGCC-------CC
T ss_pred cCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec-CccccCcCHHHHHHHh---CcCCeEEEEECCccCh-------hh
Confidence 567999999999999999999999999999998 6555789999998887 45778888764 5555 45
Q ss_pred HHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecC----cccccccCccceEEEEEcCCchhH
Q psy14428 332 WRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF----SKNMGLYGERVGTFSVLTPTSDET 407 (583)
Q Consensus 332 ~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~----SK~~~l~GlRiG~lv~~~p~~~~~ 407 (583)
+++|.++|+++|+++|+|++|......+. ...+....+.+| +|.++ +| +.|++++ ++
T Consensus 144 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~-----------~~~g~~~~~~~~s~~~~k~~~-~g-~gG~~~~--~~---- 204 (390)
T 3b8x_A 144 FDEINKIIGGRDIILLEDNCESMGATFNN-----------KCAGTFGLMGTFSSFYSNHIA-TM-EGGCIVT--DD---- 204 (390)
T ss_dssp HHHHHHHHTTSCCEEEEECTTCTTCEETT-----------EETTSSSSEEEEECCTTSSSC-SS-SCEEEEE--SC----
T ss_pred HHHHHHHHHHcCCEEEEECcCcccCEECC-----------cccccccceEEEEccCCCCCc-cC-CceEEEe--CC----
Confidence 78889999999999999999984332110 011222223343 45553 33 4599998 64
Q ss_pred HHHHHHHHHH
Q psy14428 408 ERIMSQLKIL 417 (583)
Q Consensus 408 ~~li~~l~~~ 417 (583)
+++.+++...
T Consensus 205 ~~l~~~~~~~ 214 (390)
T 3b8x_A 205 EEIYHILLCI 214 (390)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3566666543
No 207
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.69 E-value=6.2e-16 Score=163.03 Aligned_cols=202 Identities=8% Similarity=-0.040 Sum_probs=125.0
Q ss_pred CCccccCCccccCCCCCCCCChHHHHHHHHHhccCC-CCCCCCC--CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 163 PKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL-DHEYANI--GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 163 ~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~-~~~Y~~~--~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
+..++++.|.. .+++.+.+++.+...... ...+.+. ....++|+.+++++ |.+ ++++|++ .|+|
T Consensus 39 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~i~~-~t~g 105 (398)
T 2fyf_A 39 PRDGRFGSGPS-------KVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELF----SLP-DGYEVIL-GNGG 105 (398)
T ss_dssp CSSCBCCSSSC-------CCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTCEEEE-EETC
T ss_pred cCCccccCCCC-------CCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEE-eCCc
Confidence 45566664432 255777777655210100 1122221 12456666666665 443 3456653 2899
Q ss_pred chhHHHHHHHHHHHhCCCCCEEEEcCCCChh-hHHHHhhc--CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEe
Q psy14428 240 GSGSLRVGTAFLERFYPGVKTVYFPTPTWNG-HVRFCTDS--RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQ 316 (583)
Q Consensus 240 ~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~~--G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i 316 (583)
+++++.++ +..+..+| .+.+..+.|.. ....+... |++++.+++ + ++...+.+ ..++++++++
T Consensus 106 ~t~al~~~---~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-~g~~~~~~--------i~~~~~~v~~ 171 (398)
T 2fyf_A 106 ATAFWDAA---AFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITS-D-PGSAPEPQ--------TDPSVDVIAW 171 (398)
T ss_dssp HHHHHHHH---HHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEEC-C-TTCCCCCC--------CCTTCSEEEE
T ss_pred hhHHHHHH---HHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEec-C-CCCCCCcc--------ccCCCCEEEE
Confidence 99999985 44455656 22333333321 12234555 888888988 4 22222221 2567889999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceE
Q psy14428 317 TSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGT 396 (583)
Q Consensus 317 ~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~ 396 (583)
++|+||||.+++.+++.++ +|++||+|++|..+...- + + +. ..+++.|+||.++++| ++||
T Consensus 172 ~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~~---~---~----~~--~di~~~s~sK~~~~~g-g~g~ 232 (398)
T 2fyf_A 172 AHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLPV---D---I----AE--TDAYYFAPQKNFASDG-GLWL 232 (398)
T ss_dssp ESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSCC---C---G----GG--CSEEEECTTSTTCSCS-SEEE
T ss_pred eCcCCCcceecchHHhhhh------cCCeEEEEeccccCCccc---C---c----cc--CcEEEEecCcccCCCC-ceEE
Confidence 9999999999998887665 899999999998765321 1 1 11 3478999999999776 6999
Q ss_pred EEEEcCCchhHHHHHHHHHHH
Q psy14428 397 FSVLTPTSDETERIMSQLKIL 417 (583)
Q Consensus 397 lv~~~p~~~~~~~li~~l~~~ 417 (583)
+++ + +++++++.+.
T Consensus 233 l~~--~-----~~~~~~l~~~ 246 (398)
T 2fyf_A 233 AIM--S-----PAALSRIEAI 246 (398)
T ss_dssp EEE--C-----HHHHHHHHHH
T ss_pred EEE--C-----HHHHHHhhcc
Confidence 999 6 5777777654
No 208
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.68 E-value=4.6e-16 Score=165.57 Aligned_cols=182 Identities=16% Similarity=0.087 Sum_probs=133.8
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCC--CCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIG--GDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK 259 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~--G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd 259 (583)
..+.+.++............|.... ...+|+++++++++.. +.|++ ++| ++|+.++ +..+..+||
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~-------~~v~~--~sG-t~A~~~~---l~~~~~~gd 98 (421)
T 2ctz_A 32 VFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGK-------AALAT--ASG-HAAQFLA---LTTLAQAGD 98 (421)
T ss_dssp CCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCS-------EEEEE--SSH-HHHHHHH---HHHHCCTTC
T ss_pred eeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCC-------ceEEe--cCH-HHHHHHH---HHHHhCCCC
Confidence 3445555443322111134455332 3588999999999642 34555 555 8999885 344466799
Q ss_pred EEEEcCCCChhhHHHH----hhcCCeEEEE-ecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q psy14428 260 TVYFPTPTWNGHVRFC----TDSRLNVGAY-RYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQ 334 (583)
Q Consensus 260 ~Vlv~~P~y~~~~~~~----~~~G~~~~~v-~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~ 334 (583)
+|+++.|+|..+...+ +..|++++.+ +. + |++.+++.+ .++++++++++|+||||.+++ +++
T Consensus 99 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~------d~~~l~~~i---~~~~~~v~~~~~~n~~G~~~~---l~~ 165 (421)
T 2ctz_A 99 NIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE-E------RPEEFLALT---DEKTRAWWVESIGNPALNIPD---LEA 165 (421)
T ss_dssp EEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT-C------CHHHHHHHC---CTTEEEEEEESSCTTTCCCCC---HHH
T ss_pred EEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC-C------CHHHHHHhh---ccCCeEEEEECCCCCCCcccC---HHH
Confidence 9999999999887765 7789999988 66 2 788888877 568899999999999999998 778
Q ss_pred HHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 335 LAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 335 l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|.++|+++|+++|+|++|..+.+.. .+ + . .+..+++.|+||.++.+|.|+|++++
T Consensus 166 i~~~a~~~g~~livD~~~~~~g~~~---~~--~----~-~~~Di~~~s~~K~l~~~g~~~G~~~~ 220 (421)
T 2ctz_A 166 LAQAAREKGVALIVDNTFGMGGYLL---RP--L----A-WGAALVTHSLTKWVGGHGAVIAGAIV 220 (421)
T ss_dssp HHHHHHHHTCEEEEECGGGGGGTSC---CG--G----G-GTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred HHHHHHHcCCEEEEECCcccccccC---Cc--c----c-cCCeEEEECCcccccCCCCcEEEEEE
Confidence 8999999999999999992232322 11 1 1 23568999999999999999999998
No 209
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.66 E-value=7.6e-16 Score=165.58 Aligned_cols=223 Identities=12% Similarity=0.038 Sum_probs=146.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEEecCCchh-HHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecc
Q psy14428 210 KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSG-SLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 288 (583)
Q Consensus 210 ~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~-al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 288 (583)
++|+.+++++ |.+ ++ +++ |+|+++ ++.++...+.... +|+.|++++|.|..+...++..|++++.+++.
T Consensus 137 ~~~~~la~~~----g~~--~~-~~~--t~g~te~a~~~al~~~~~~~-~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~ 206 (456)
T 2z67_A 137 KILESFFKQL----GLN--VH-AIA--TPISTGMSISLCLSAARKKY-GSNVVIYPYASHKSPIKAVSFVGMNMRLVETV 206 (456)
T ss_dssp HHHHHHHHHT----TCC--CE-EEE--ESSCHHHHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHc----CCC--CC-EEE--eCcHHHHHHHHHHHHHHHhc-CCCEEEEECCCcHHHHHHHHHcCCCceEEEEe
Confidence 3555555554 433 34 888 999995 4443321222212 47889999999999999999999999988862
Q ss_pred c-CCCCCCChhhHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchH
Q psy14428 289 D-NKTNGLDFAGMMEDIKAM--PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAF 365 (583)
Q Consensus 289 d-~~~~g~d~~~l~~~l~~~--~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~ 365 (583)
. .+++.+|++.+++.++.. ..+++++++++||||||.+.+ +++|.++|+++|+++++|++|..+..+- .+
T Consensus 207 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~----~~ 279 (456)
T 2z67_A 207 LDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYY----LE 279 (456)
T ss_dssp EETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH----HH
T ss_pred ccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHh----hH
Confidence 1 234678999999998321 236778888999999999966 5666888999999999999998876421 11
Q ss_pred HHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhh
Q psy14428 366 SLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQ 445 (583)
Q Consensus 366 ~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~ 445 (583)
........... +++.|++|.++ .+.++||+++ .+ +++++.+...........+.+.+.++...+....+++.
T Consensus 280 ~~~~~~~~~~D-~~~~s~hK~~~-~p~g~G~l~~--~~----~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~~~~~~~~ 351 (456)
T 2z67_A 280 KLKKAFKYRVD-AVVSSSDKNLL-TPIGGGLVYS--TD----AEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNYLEL 351 (456)
T ss_dssp HHHHHHTSCCS-EEEEEHHHHHC-CCSSCEEEEE--SC----HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCC-EEEEcCCCCcC-CCCCeEEEEE--cC----HHHHhhcCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11111111223 56789999765 6799999999 65 36777664322111122346667777777765555555
Q ss_pred hhhHHHHHHHHH
Q psy14428 446 CDETERIMSQLK 457 (583)
Q Consensus 446 ~~~~~~~~~~l~ 457 (583)
.++.++..+.+.
T Consensus 352 ~~~~~~~~~~l~ 363 (456)
T 2z67_A 352 VKNQKNSKKLLD 363 (456)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 554444444433
No 210
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.65 E-value=5.2e-16 Score=168.22 Aligned_cols=261 Identities=9% Similarity=-0.033 Sum_probs=175.1
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-------CCCeEEEecCCchhHHHHHHHHHHHh
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFK-------DNRLAIVQGISGSGSLRVGTAFLERF 254 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~-------~~~I~i~~t~G~~~al~l~~~~l~~~ 254 (583)
++..+.+++...... ....|....+..++++++++++.+..|.+.+ ...+++ |+|+++|+.++...+...
T Consensus 86 ~~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~--t~ggTeA~~~al~~~~~~ 162 (486)
T 1js3_A 86 YPAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI--QGSASEATLVALLAARTK 162 (486)
T ss_dssp HHHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE--ESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEE--cCCcHHHHHHHHHHHHHH
Confidence 345677777776643 2566777778899999999999887776642 356888 999999988763332211
Q ss_pred -CC-----CC---------C-EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC---CCcEEEE
Q psy14428 255 -YP-----GV---------K-TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP---ERSILFL 315 (583)
Q Consensus 255 -~~-----~g---------d-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~---~~~~~i~ 315 (583)
.+ .| + .|++++++|..+...++..|++++.+|+ | +++.+|++.+++.+...+ ....+++
T Consensus 163 ~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~-d-~~~~~d~~~L~~~i~~~~~~g~~p~~vv 240 (486)
T 1js3_A 163 VVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPS-D-GKFAMRASALQEALERDKAAGLIPFFVV 240 (486)
T ss_dssp HHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECC-C-TTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeec-C-CCCCCCHHHHHHHHHHHHhCCCCceEEE
Confidence 11 03 2 3788999999999999999999999998 5 357899999999995432 1235888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH-HHHHHHhcCcEEEEecCcccccccCccc
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS-LRYFAKEVGQLCLAQSFSKNMGLYGERV 394 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~-~~~~~~~~~~vi~i~S~SK~~~l~GlRi 394 (583)
+++|+||||.+ +++++|+++|+++|+++++|++|+.+.+... .... +..+ . .-..+ ..|++|.+++| +++
T Consensus 241 ~~~~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~--~~~~~~~g~-~-~adsi-~~~~hK~~~~p-~~~ 311 (486)
T 1js3_A 241 ATLGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICP--EFRHLLNGV-E-FADSF-NFNPHKWLLVN-FDC 311 (486)
T ss_dssp EEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGST--TTGGGGTTG-G-GCSEE-EECHHHHSSCC-SSC
T ss_pred EeCCCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCH--HHHHHhcCc-c-ccCee-EEchhhhcCCC-cce
Confidence 99999999976 5688889999999999999999987654220 1111 1111 1 12334 46789999866 899
Q ss_pred eEEEEEcCCchhHHHHHHHHHHHHh---c-----------------cccCCChHHHHHHHHHhCChhhhhhhhhHHHHHH
Q psy14428 395 GTFSVLTPTSDETERIMSQLKILIR---G-----------------FYSNPPIHGARIVTEILSDPKLKAQCDETERIMS 454 (583)
Q Consensus 395 G~lv~~~p~~~~~~~li~~l~~~~~---~-----------------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 454 (583)
||+++ .++. .+.+.+..... . .......+.++++...+....+++..++..+...
T Consensus 312 G~l~~--~~~~---~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~ 386 (486)
T 1js3_A 312 SAMWV--KRRT---DLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSH 386 (486)
T ss_dssp EEEEE--SCHH---HHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE--eCHH---HHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999 7532 22333311000 0 0012346777777777765566666655555444
Q ss_pred HHHHHHh
Q psy14428 455 QLKILIR 461 (583)
Q Consensus 455 ~l~~~~r 461 (583)
.+.+.++
T Consensus 387 ~l~~~L~ 393 (486)
T 1js3_A 387 EFEAFVL 393 (486)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4444443
No 211
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.64 E-value=5.1e-15 Score=161.34 Aligned_cols=206 Identities=12% Similarity=-0.017 Sum_probs=154.2
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH-hC-------
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER-FY------- 255 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~-~~------- 255 (583)
..+.+++....... ...|....+..+|++++++|+.+..|.+..++.+++ |+|+++|+..+...+.. +.
T Consensus 110 ~~~~e~l~~~~~~~-~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~--t~ggt~a~~~al~~a~~~~~~~~~~~G 186 (511)
T 3vp6_A 110 GLAGEWLTSTANTN-MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIF--SPGGAISNMYSIMAARYKYFPEVKTKG 186 (511)
T ss_dssp HHHHHHHHHHHCCC-SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEE--ESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred HHHHHHHHHHhccC-CCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEE--CCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence 34556666555432 567888899999999999999988888776789999 99999998776333222 10
Q ss_pred ---CCCCEEEEcCCCChhhHHHHhhcCC---eEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCC
Q psy14428 256 ---PGVKTVYFPTPTWNGHVRFCTDSRL---NVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVD 326 (583)
Q Consensus 256 ---~~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~ 326 (583)
.+++.|++++++|..+...++..|+ +++.+|. |+ ++.+|++.+++++.+. ..++++++++.|+||||.+
T Consensus 187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~-d~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v 264 (511)
T 3vp6_A 187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC-NE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF 264 (511)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeec-CC-CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence 1367999999999999999999998 8999998 54 4789999999998643 2237899999999999998
Q ss_pred CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCc
Q psy14428 327 LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTS 404 (583)
Q Consensus 327 ~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~ 404 (583)
+++++|+++|+++|+++++|++|........ +-...+. ....--+++.+++|.++.| ..+|++++ .++
T Consensus 265 ---d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~-~~~~~~~---g~~~aDsv~~~~hK~l~~p-~g~g~l~~--~~~ 332 (511)
T 3vp6_A 265 ---DPIQEIADICEKYNLWLHVDAAWGGGLLMSR-KHRHKLN---GIERANSVTWNPHKMMGVL-LQCSAILV--KEK 332 (511)
T ss_dssp ---CCHHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGT---TGGGCSEEEECTTSTTCCC-SCCEEEEE--SST
T ss_pred ---ccHHHHHHHHHHcCCEEEEEccchhhHhhCh-hhhhhcc---CCccCCEEEECcccccCCC-cCeEEEEE--eCH
Confidence 4578889999999999999999987654221 0001110 0111134557999999855 78899999 653
No 212
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.43 E-value=2.3e-17 Score=176.93 Aligned_cols=283 Identities=14% Similarity=0.053 Sum_probs=177.4
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...||+..|.+....|. ..+.+.+++.+.+.......| +..-..+|.+.+++++. ..+++++ +++|
T Consensus 98 dG~~yiD~~~~~~~~~lGh--~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~p-------~~~~v~~--~nSG 165 (465)
T 2yky_A 98 DGHAYVNFLGEYTAGLFGH--SHPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRFP-------SIDLVRF--TNSG 165 (465)
Confidence 3456788888777544553 235666666655544222233 33445667777776652 2478999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh----hcCC--eEEEEecccCCCCCCChhhHHHHHHcCCCCcEEE
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT----DSRL--NVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~--~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
++|+..+..+++.+ .+++.|++.+++|..+..... ..|+ .++.+|. -|++.+++.+++..++++++
T Consensus 166 seA~~~Aik~ar~~-tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aav 237 (465)
T 2yky_A 166 TEANLMALATATAI-TGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAI 237 (465)
Confidence 99999864443322 336999999999977654322 1233 2333333 16777877775433456666
Q ss_pred EeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc
Q psy14428 315 LQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 315 ~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR 393 (583)
++...+|+||.+ .+++.+++|.++|+++|+++|+||+|. +..+. .... +..+.+..+.||||.+| .|+|
T Consensus 238 i~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~----~~a~----~~~gv~pDi~t~sK~lg-~G~p 307 (465)
T 2yky_A 238 LVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG----GGAQ----EMLGISADLTTLGKYIG-GGMS 307 (465)
Confidence 655446669965 468899999999999999999999999 74321 1111 11223344569999999 5999
Q ss_pred ceEEEEEcCCchhHHHHHHHHHH-----HHhccccCCChHHHHHHHHHhC---ChhhhhhhhhHHH-HHHHHHHHHhh--
Q psy14428 394 VGTFSVLTPTSDETERIMSQLKI-----LIRGFYSNPPIHGARIVTEILS---DPKLKAQCDETER-IMSQLKILIRG-- 462 (583)
Q Consensus 394 iG~lv~~~p~~~~~~~li~~l~~-----~~~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~-~~~~l~~~~r~-- 462 (583)
+||+++ + +++++.+.. ......++.++++|.++...++ ++.+.+++.++.. +.+.++.+...
T Consensus 308 iG~v~~--~-----~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 380 (465)
T 2yky_A 308 FGAFGG--R-----RDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQ 380 (465)
Confidence 999999 6 478888876 2233456778888888766654 4444444444332 23333333221
Q ss_pred ccCCCccchhhHHHHhcC
Q psy14428 463 FYSNPPIHGARIVTEILS 480 (583)
Q Consensus 463 ~~~~~p~~g~~i~~~~l~ 480 (583)
.....+..|.++++.+..
T Consensus 381 ~~~~v~g~G~~~~i~~~~ 398 (465)
T 2yky_A 381 APLQFTGLGSLGTIHFSR 398 (465)
Confidence 112345678888776643
No 213
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.61 E-value=7.3e-16 Score=165.24 Aligned_cols=167 Identities=10% Similarity=-0.037 Sum_probs=119.8
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCe
Q psy14428 202 YANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLN 281 (583)
Q Consensus 202 Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 281 (583)
|.+.....++++.+|+ ++ .. +++++ |+|+++|+.++ +..++.+||+|++++|+|..+...+...|++
T Consensus 53 ~~~~~~~~~~~~~la~-~g----~~---~~v~~--~~G~t~a~~~~---~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~ 119 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-HS----DY---DGYFL--VNGTTSGILSV---IQSFSQKKGDILMARNVHKSVLHALDISQQE 119 (446)
T ss_dssp TSCSSHHHHHHHHHCS-CT----TE---EEEEE--SSHHHHHHHHH---HHTTTTSSSCEEECTTCCHHHHHHHHHHTCC
T ss_pred cCcchHHHHHHHHHHh-cC----CC---ceEEE--eCCHHHHHHHH---HHHhcCCCCEEEEecCccHHHHHHHHHcCCe
Confidence 4455556777777776 53 22 67899 99999999985 4556677999999999999999999999999
Q ss_pred EEEEecccCCC----CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCC-CC
Q psy14428 282 VGAYRYFDNKT----NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLG-LT 356 (583)
Q Consensus 282 ~~~v~~~d~~~----~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~-l~ 356 (583)
++.++....++ +++|++.+ + .++++++++++ +||||.+++ +++|+++|+++|++||+||+|.. +.
T Consensus 120 ~~~v~~~~~~~~~~~~~~d~~~l---~---~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~ 189 (446)
T 2x3l_A 120 GHFIETHQSPLTNHYNKVNLSRL---N---NDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFG 189 (446)
T ss_dssp EEECEEEECTTTSSEEEEEC-------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTT
T ss_pred EEEEeCeeccccCcCCCCCHHHH---c---CCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhc
Confidence 99988721222 35677766 2 45678888888 667999998 56788999999999999999986 44
Q ss_pred CCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 357 SGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
|.+ . +.+... . +.-+++.|+||+++ ++.++||+++
T Consensus 190 f~~--~-~~~~~~---~-g~Di~~~S~~K~l~-~~~g~g~l~~ 224 (446)
T 2x3l_A 190 LQG--F-PDSTLN---Y-QADYVVQSFHKTLP-ALTMGSVLYI 224 (446)
T ss_dssp STT--S-CCCGGG---G-TCSEEEECHHHHSS-SCTTCEEEEE
T ss_pred cCC--C-CCChHH---c-CCCEEEECCccccc-cccccEEEEE
Confidence 443 1 111111 1 22389999999664 4456899999
No 214
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.61 E-value=2.7e-15 Score=163.21 Aligned_cols=278 Identities=9% Similarity=-0.012 Sum_probs=177.9
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeE-EEecCCchhHHHHHHHHHHHh-C---
Q psy14428 181 YVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLA-IVQGISGSGSLRVGTAFLERF-Y--- 255 (583)
Q Consensus 181 ~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~-i~~t~G~~~al~l~~~~l~~~-~--- 255 (583)
++++.+.+++.+.+... ...|....+..++++.+.+++.+..|.+.+++++. .+.|+|+++++.++...+..- .
T Consensus 67 ~~~~~v~~~l~~~~~~~-~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~ 145 (502)
T 3hbx_A 67 WMEPECDKLIMSSINKN-YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (502)
T ss_dssp CCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccC-CCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence 35678888887766542 33454555678888888888887777765455443 223889999998763322111 0
Q ss_pred -CCCC-----EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCH
Q psy14428 256 -PGVK-----TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 256 -~~gd-----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
.+|+ .|++++++|..+...++..|++++.+|+ +++++.+|++.+++.+ .++++++++++|+||||.+.+.
T Consensus 146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i---~~~t~~v~~~~~~n~tG~~~~l 221 (502)
T 3hbx_A 146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKL-SEGYYVMDPQQAVDMV---DENTICVAAILGSTLNGEFEDV 221 (502)
T ss_dssp HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECC-BTTBCSCCHHHHHHHC---CTTEEEEEEEBSCTTTCCBCCH
T ss_pred HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEec-CCCcCcCCHHHHHHHH---hhCCEEEEEecCCCCCCcccCH
Confidence 0255 9999999999999999999999999998 5555789999999887 5678999999999999999764
Q ss_pred HHHHHHHHHHHhc------CeEEEEeccCCCCC----CCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 330 DQWRQLAVVVKQR------HLYPFFDMAYLGLT----SGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 330 ~~~~~l~~~a~~~------~i~iI~De~Y~~l~----~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
++|.++|+++ ++++++|++|..+. .+.. ...+ ...+-.++..|..|.++ .+.++||+++
T Consensus 222 ---~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~---~~~~----~~~~~D~v~~s~hK~l~-~p~g~G~~~~ 290 (502)
T 3hbx_A 222 ---KLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPEL---EWDF----RLPLVKSINVSGHKYGL-VYAGIGWVIW 290 (502)
T ss_dssp ---HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTC---CCST----TSTTEEEEEEETTTTTC-CCSSCEEEEE
T ss_pred ---HHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccc---cccc----CCCCceEEEECcccccC-CCCCeEEEEE
Confidence 5567778888 99999999998765 2210 0000 11123456678888664 7889999998
Q ss_pred EcCCchhHHHHH-HHHHHHHhccc---------c---CCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHhhc--c
Q psy14428 400 LTPTSDETERIM-SQLKILIRGFY---------S---NPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIRGF--Y 464 (583)
Q Consensus 400 ~~p~~~~~~~li-~~l~~~~~~~~---------~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r~~--~ 464 (583)
.++ .++ +.+........ . ....+.|+++...+....+.+..++..+....+.+.++.. +
T Consensus 291 --~~~----~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 364 (502)
T 3hbx_A 291 --RNK----EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERF 364 (502)
T ss_dssp --SSG----GGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred --eCH----HHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 543 222 11111000000 0 1134567677666665555555555444444444444322 3
Q ss_pred C-CCc-cchhhHHHHhcC
Q psy14428 465 S-NPP-IHGARIVTEILS 480 (583)
Q Consensus 465 ~-~~p-~~g~~i~~~~l~ 480 (583)
. ..+ ...+++.+.+..
T Consensus 365 ~~~~~~~~~~~v~f~~~~ 382 (502)
T 3hbx_A 365 NIVSKDEGVPLVAFSLKD 382 (502)
T ss_dssp EECSCSSSSSEEEEEESS
T ss_pred EEEeCCCCceEEEEEecC
Confidence 3 222 345555555443
No 215
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.60 E-value=7.1e-15 Score=160.07 Aligned_cols=255 Identities=11% Similarity=-0.015 Sum_probs=171.9
Q ss_pred HHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHh-C----CCC---
Q psy14428 187 KEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERF-Y----PGV--- 258 (583)
Q Consensus 187 ~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~-~----~~g--- 258 (583)
.+.+...... ....|....+..++++++.+++.+..|.+.+++++++ |+|+++|+.++...++.. . .+|
T Consensus 110 ~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~--t~ggtea~~~al~~~~~~~~~~~~~~G~~~ 186 (504)
T 2okj_A 110 GEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIF--SPGGAISNMYSIMAARYKYFPEVKTKGMAA 186 (504)
T ss_dssp HHHHHHHHCC-BSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEE--ESSHHHHHHHHHHHHHHHHCTTHHHHCGGG
T ss_pred HHHHHHhhcc-CCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEE--eCCcHHHHHHHHHHHHHHHhhHHhhcCccc
Confidence 3444443332 2355766677778888887777766666544789999 999999998864443221 0 135
Q ss_pred --C-EEEEcCCCChhhHHHHhhcCC---eEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCH
Q psy14428 259 --K-TVYFPTPTWNGHVRFCTDSRL---NVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSE 329 (583)
Q Consensus 259 --d-~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~ 329 (583)
+ .|++++++|..+...++..|. +++.+|+ ++ ++.+|++.+++.+.+. ..+++++++++|+||||.+.+
T Consensus 187 ~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~- 263 (504)
T 2okj_A 187 VPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC-NE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP- 263 (504)
T ss_dssp SCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC-
T ss_pred cCCeEEEECCcchHHHHHHHHHcCCCcccEEEEec-CC-CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC-
Confidence 6 799999999999999988877 8999998 54 4789999999988542 225789999999999999865
Q ss_pred HHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCch-HHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHH
Q psy14428 330 DQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDA-FSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETE 408 (583)
Q Consensus 330 ~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~-~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~ 408 (583)
+++|.++|+++|+++++|++|..+..... .. ..+..+ . .. -+++.|++|.++.| .++|++++ .++
T Consensus 264 --l~~I~~la~~~g~~lhvD~a~~~~~~~~~--~~~~~~~g~-~-~~-D~i~~~~hK~~~~p-~~~g~l~~--~~~---- 329 (504)
T 2okj_A 264 --IQEIADICEKYNLWLHVDAAWGGGLLMSR--KHRHKLNGI-E-RA-NSVTWNPHKMMGVL-LQCSAILV--KEK---- 329 (504)
T ss_dssp --HHHHHHHHHHHTCEEEEEETTGGGGGGCT--TTGGGGTTG-G-GC-SEEEECTTSTTCCC-SCCEEEEE--SST----
T ss_pred --HHHHHHHHHHcCCEEEEehhhhhHHHhCH--hhHhhcCCc-c-cC-CEEEECchhhcCCC-cceEEEEE--ECH----
Confidence 66778899999999999999998775421 11 111111 1 12 25677899999866 79999999 653
Q ss_pred HHHHHHHHH-Hhcccc--------------------CCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 409 RIMSQLKIL-IRGFYS--------------------NPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 409 ~li~~l~~~-~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
++++..... ...... ....+.++++...+....+++..++..+..+.+.+.++
T Consensus 330 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~ 403 (504)
T 2okj_A 330 GILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIK 403 (504)
T ss_dssp THHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344432211 111100 12467777777777655566665555555555555444
No 216
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.60 E-value=1.3e-14 Score=157.59 Aligned_cols=277 Identities=10% Similarity=0.001 Sum_probs=175.0
Q ss_pred CChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH-hC-----
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER-FY----- 255 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~-~~----- 255 (583)
.++.+.+++.....+.....|....+..++.+++.+++.+..|.+ ..+++++ |+|+++|+.++...++. +.
T Consensus 112 ~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~--t~ggt~a~~~al~~ar~~~~~~~~~ 188 (497)
T 2qma_A 112 LMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIF--TSGGTQSNQMGLMLARDWIADKLSG 188 (497)
T ss_dssp BHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEE--ESSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEE--cCCchHHHHHHHHHHHHHHHHhhcc
Confidence 445555554333323224456555677788888777777666653 2378999 99999999886444221 11
Q ss_pred ----CC------CC-EEEEcCCCChhhHHHHhhcCC---eEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCC
Q psy14428 256 ----PG------VK-TVYFPTPTWNGHVRFCTDSRL---NVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTS 318 (583)
Q Consensus 256 ----~~------gd-~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~ 318 (583)
.+ || .|+++.+++..+...++..|. +++.+|+ ++ ++.+|++.+++.+++. ..++.+++++.
T Consensus 189 ~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~ 266 (497)
T 2qma_A 189 HSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDA-NA-DGTMDITKLDEVIAQAKAEGLIPFAIVGTA 266 (497)
T ss_dssp CCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSSBCGGGHHHHHHHHHHTTCEEEEEEEEB
T ss_pred cchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEec-CC-CCcCCHHHHHHHHHHHHHCCCcceEEEEcC
Confidence 01 46 899999999988888888876 8999998 54 4789999999998642 11244788899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH-HHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS-LRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~-~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
++||||.+-+ +++|.++|+++|+++++|++|..+.... +... +..+ + .--+++.|++|.++.| .++|++
T Consensus 267 ~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~---~~~~~~~gi-~--~~D~i~~s~hK~l~~p-~~~G~l 336 (497)
T 2qma_A 267 GTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILS---SHKSRLKGV-E--RAHSISVDFHKLFYQT-ISCGAL 336 (497)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGS---TTGGGGTTG-G--GCSEEEEETTTTTCCC-SSCEEE
T ss_pred CCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhC---cchHhhcCc-c--cCCEEEEcchhccCCC-cceEEE
Confidence 9999998655 6777889999999999999998876542 1110 1111 1 1125677899999866 799999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhcccc-----------------CCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGFYS-----------------NPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILI 460 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~~~-----------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 460 (583)
++ .++. .++.+......... ....+.++++...+....+++..++..+..+.+.+.+
T Consensus 337 ~~--~~~~----~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L 410 (497)
T 2qma_A 337 LV--NDKS----NFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMI 410 (497)
T ss_dssp EE--SCGG----GGGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EE--eCHH----HHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 6542 22222110000000 0124556667777776666666666555555555555
Q ss_pred hh--ccCC-CccchhhHHHHhc
Q psy14428 461 RG--FYSN-PPIHGARIVTEIL 479 (583)
Q Consensus 461 r~--~~~~-~p~~g~~i~~~~l 479 (583)
+. .+.. .+..+..+++.+.
T Consensus 411 ~~~~~~~~~~~~~~~~v~f~~~ 432 (497)
T 2qma_A 411 RTNDQFELLAEPSLSTVLFRAT 432 (497)
T ss_dssp HTCTTEEECSCCSSSEEEEEEC
T ss_pred hhCCCeEEEcCCCceEEEEEEc
Confidence 43 2321 2333445555443
No 217
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.59 E-value=1.2e-15 Score=161.54 Aligned_cols=127 Identities=27% Similarity=0.476 Sum_probs=102.1
Q ss_pred HHHHhhcCCCeEEecCCCCcCchhhhhhcC----CCceeeeeccCCCCcc--------------------------cchh
Q psy14428 18 AFLERFYPGVKTVYFPTPTWNGHVRFCTDS----RLNVGAYRYFDNKTNG--------------------------LDFA 67 (583)
Q Consensus 18 ~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~----~~~~~~y~~~~~~~~~--------------------------~d~~ 67 (583)
.+-+||- + -+..++||+++....+-.|. .|.|+.||+-++++.. .+|-
T Consensus 16 ~~~~~~~-~-v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr 93 (420)
T 4h51_A 16 TTAERWQ-K-IQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFI 93 (420)
T ss_dssp CHHHHHH-T-CCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHH
T ss_pred hhhHHHh-C-CCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHH
Confidence 3445552 2 35689999999988877664 3889999998887764 3444
Q ss_pred hhHHH---------HHhhhhhcccccchhhhHHHHHHHhCCC-CcEEEeCCCCCCChHhHhhhcCCc-ccccccccCCCC
Q psy14428 68 GMMED---------IKLAIVQGISGSGSLRVGTAFLERFYPG-VKTVYFPTPTWNGHVRFCTDSRLN-VGAYRYFDNKTN 136 (583)
Q Consensus 68 ~~~~~---------~~~a~~q~~~gtgal~~~~~~~~~~~~~-~~~~~i~~ptw~nh~~if~~~g~~-~~~y~Y~~~~~~ 136 (583)
..+.+ -+.+++||+|||||+++|++|+.+++.+ ...|||++|+|+||..+|+.+|.+ +..|+||++++.
T Consensus 94 ~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~ 173 (420)
T 4h51_A 94 DEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV 173 (420)
T ss_dssp HHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred HHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence 44444 2567899999999999999999987632 368999999999999999999986 889999999999
Q ss_pred CccccCcccc
Q psy14428 137 GLDFAGMMED 146 (583)
Q Consensus 137 ~~d~~~m~~~ 146 (583)
++||++|.+.
T Consensus 174 ~~d~~~~~~~ 183 (420)
T 4h51_A 174 SLNFEGMKKD 183 (420)
T ss_dssp EECHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999988763
No 218
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.55 E-value=2.1e-13 Score=142.81 Aligned_cols=172 Identities=11% Similarity=0.087 Sum_probs=125.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH--HHHhhcC--CeEEEE
Q psy14428 210 KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV--RFCTDSR--LNVGAY 285 (583)
Q Consensus 210 ~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~--~~~~~~G--~~~~~v 285 (583)
++++.++++++ .. +.|++ |+|+++|++.+ +..+. +||+|++.+++|..+. .+++..| .+++.+
T Consensus 39 ~~~~~l~~~~~----~~---~~v~~--~~sgt~a~~~~---~~~~~-~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 105 (379)
T 3ke3_A 39 DLLSNLKTVYN----AE---AAVII--PGSGTYGMEAV---ARQLT-IDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVL 105 (379)
T ss_dssp HHHHHHHHHHT----CS---EEEEE--ESCHHHHHHHH---HHHHC-TTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEE
T ss_pred HHHHHHHHHhC----CC---CEEEE--cCChhHHHHHH---HHhCC-CCCeEEEEeCCchhHHHHHHHHHhCCCCceEEE
Confidence 45666666664 22 57888 99999999985 33444 5999999999987653 3455556 477777
Q ss_pred ecccCC-------C-CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC
Q psy14428 286 RYFDNK-------T-NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS 357 (583)
Q Consensus 286 ~~~d~~-------~-~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~ 357 (583)
+. +.. . ..+|++.+++.+.. .++++++++.++||||.+++.+.+++|.++|+++|+++|+|+++. -
T Consensus 106 ~~-~~~g~~~~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g-- 179 (379)
T 3ke3_A 106 TA-ERTEDTEAPKPFAPVDIETAVAKIKE--DKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G-- 179 (379)
T ss_dssp EC-EESSCCSSCCCEECCCHHHHHHHHHH--HTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T--
T ss_pred ec-cccccccccCCCCCCCHHHHHHHHhh--cCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C--
Confidence 76 321 0 14799999988842 256778889999999999999999999999999999999999975 2
Q ss_pred CCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 358 GDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
.. +..+.. .+-.+++.|++|.++ .+..+|++++ + +++++++..
T Consensus 180 -~~---~~~~~~----~~~d~~~~s~~K~l~-~~~g~g~~~~--~-----~~~~~~l~~ 222 (379)
T 3ke3_A 180 -CV---WLDMKE----LGIDVLISAPQKGWS-STPCAGLVML--S-----AAAIKKVES 222 (379)
T ss_dssp -TC---CCCHHH----HTCSEEEECTTTTTC-SCCCEEEEEE--C-----HHHHHHHHT
T ss_pred -Cc---cccccc----cCCCEEEecchhhcC-CCCceEEEEE--C-----HHHHHhhhc
Confidence 21 112222 234578899999986 4456899999 6 577777764
No 219
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.54 E-value=1.8e-13 Score=149.36 Aligned_cols=243 Identities=10% Similarity=-0.058 Sum_probs=161.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHH-h----CCCCC------EEEEcCCC
Q psy14428 199 DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLER-F----YPGVK------TVYFPTPT 267 (583)
Q Consensus 199 ~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~-~----~~~gd------~Vlv~~P~ 267 (583)
...|...++..++.+.+.+++.+..|.+ ++++++ |+|+++|+.++...++. . ..+|| .|++++++
T Consensus 137 ~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~--t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~ 212 (515)
T 2jis_A 137 QYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIF--CPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKEC 212 (515)
T ss_dssp TTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEE--ESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTS
T ss_pred CCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEE--cCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCc
Confidence 3467767776666666555555544443 688999 99999998776433321 1 11365 89999999
Q ss_pred ChhhHHHHhhcCC---eEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q psy14428 268 WNGHVRFCTDSRL---NVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQ 341 (583)
Q Consensus 268 y~~~~~~~~~~G~---~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~ 341 (583)
|..+...++..|. +++.+|+ ++ ++.+|++.+++.+.+. ..+++++++++|+||||.+.+ +++|.++|++
T Consensus 213 h~s~~~~~~~~g~g~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~ 287 (515)
T 2jis_A 213 HYSIQKGAAFLGLGTDSVRVVKA-DE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQR 287 (515)
T ss_dssp CTHHHHHHHHTTSCGGGEEEECB-CT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCCcEEEEec-CC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHH
Confidence 9999999998888 8999998 54 4789999999998642 235789999999999999876 6677889999
Q ss_pred cCeEEEEeccCCCCCCCCCCCchH-HHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH----
Q psy14428 342 RHLYPFFDMAYLGLTSGDFDKDAF-SLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI---- 416 (583)
Q Consensus 342 ~~i~iI~De~Y~~l~~~~~~~~~~-~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~---- 416 (583)
+|+++++|++|..+..... ... .+. ...+-.+++.|++|.++.| .++|++++ .++. +++++...
T Consensus 288 ~g~~l~vD~a~~~~~~~~~--~~~~~~~---g~~~aD~v~~s~hK~l~~p-~g~G~l~~--~~~~---~~~~~~~~~~~~ 356 (515)
T 2jis_A 288 HGLWLHVDAAWGGSVLLSQ--THRHLLD---GIQRADSVAWNPHKLLAAG-LQCSALLL--QDTS---NLLKRCHGSQAS 356 (515)
T ss_dssp HTCEEEEEETTGGGGGGCT--TTGGGGT---TGGGCSEEEECTTSTTCCC-SCCEEEEE--SCCS---CHHHHHHCC---
T ss_pred cCCeEEEehhhhhHHHhCh--hhHhhcC---CCccCCEEEECcccccCCC-CCeeEEEE--eChH---HHHHHHhcCCch
Confidence 9999999999998776431 111 111 1112347788999998744 68999999 7530 24443211
Q ss_pred HH-h-cc---------------ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHHHh
Q psy14428 417 LI-R-GF---------------YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKILIR 461 (583)
Q Consensus 417 ~~-~-~~---------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~r 461 (583)
.. . .. ......+.++++...+....+++..++.....+.+.+.++
T Consensus 357 yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~ 418 (515)
T 2jis_A 357 YLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMK 418 (515)
T ss_dssp ------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 10 0 00 0012255666666666655566555555555544544444
No 220
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.52 E-value=9.7e-14 Score=157.46 Aligned_cols=174 Identities=14% Similarity=0.082 Sum_probs=125.8
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEE
Q psy14428 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAY 285 (583)
Q Consensus 206 ~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 285 (583)
.-..++++.++++++. .+.+++ ++|+++++..+ +..++.+||.|+++.|+|..+...+...|++++.+
T Consensus 205 g~v~~~ee~la~l~G~-------d~~i~~--~~Gtt~a~~~~---i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v 272 (755)
T 2vyc_A 205 GAFGESEKYAARVFGA-------DRSWSV--VVGTSGSNRTI---MQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYM 272 (755)
T ss_dssp HHHHHHHHHHHHHHTC-------SEEEEE--SSHHHHHHHHH---HHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEE
T ss_pred cHHHHHHHHHHHHhCC-------CceEEE--CCcHHHHHHHH---HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE
Confidence 3357788888888763 145777 99999999884 45567779999999999999988899999999999
Q ss_pred ecccCCCCC----C-----ChhhHHHHHHcCC-------CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe
Q psy14428 286 RYFDNKTNG----L-----DFAGMMEDIKAMP-------ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFD 349 (583)
Q Consensus 286 ~~~d~~~~g----~-----d~~~l~~~l~~~~-------~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~D 349 (583)
+. +.++++ + |++.+++++++.. .++++++++|| ||||.+.+ +++|+++|++++++|++|
T Consensus 273 ~~-~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livD 347 (755)
T 2vyc_A 273 VP-SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFD 347 (755)
T ss_dssp CC-CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEE
T ss_pred eC-CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEE
Confidence 87 433334 4 9999999986421 12347888898 79999976 667789999999999999
Q ss_pred ccCCCC-CCCCCCCchHHHHHH--HH-hcCcEEEEecCcccccccCccc-eEEEE
Q psy14428 350 MAYLGL-TSGDFDKDAFSLRYF--AK-EVGQLCLAQSFSKNMGLYGERV-GTFSV 399 (583)
Q Consensus 350 e~Y~~l-~~~~~~~~~~~~~~~--~~-~~~~vi~i~S~SK~~~l~GlRi-G~lv~ 399 (583)
|+|... .+++...+..++ .. .+ ..+++|++.|+||++ +|++. |++++
T Consensus 348 eA~~~~~~~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~ 399 (755)
T 2vyc_A 348 EAWYGYARFNPIYADHYAM-RGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_dssp CTTCTTGGGCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEE
T ss_pred CcCchhcccCcccCCcchh-cCCcCCccCCCeEEEECccccc--cCcCCeeeeee
Confidence 999753 232100001111 11 12 235788999999975 68885 45555
No 221
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.52 E-value=2.8e-13 Score=145.96 Aligned_cols=206 Identities=16% Similarity=0.148 Sum_probs=116.1
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCC---CCC---HHHHHHHHHHHhCCCCCCCCCCCe-EEEe
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANI---GGD---AKFCKLAAQLAYGEDFPAFKDNRL-AIVQ 236 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~---~G~---~~Lr~aia~~~~~~~g~~~~~~~I-~i~~ 236 (583)
+.+.|..++. ++++.|.+++...+.+....+|+.. .|. .+|++...+++.+.+|.+ .+.+ ..|+
T Consensus 55 ~~i~lias~n-------~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~--~~~~~~~v~ 125 (490)
T 2a7v_A 55 RGLELIASEN-------FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLD--PAQWGVNVQ 125 (490)
T ss_dssp HSEECCTTCC-------CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCC--TTTEEEECC
T ss_pred cCceEECCCC-------CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCC--cccCceEEe
Confidence 4566654332 1568899988776654322344321 232 366633334443333332 3322 1222
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH--------HHhhcCC--eEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR--------FCTDSRL--NVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
+++|++|+..+ +..++.|||+|++++|.|..+.. .+...|. +++.+++ |++++.+|++.+++.+..
T Consensus 126 ~~sGt~An~~a---l~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~v-d~~~~~iD~d~le~~l~~ 201 (490)
T 2a7v_A 126 PYSGSPANLAV---YTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALTARL 201 (490)
T ss_dssp CSSHHHHHHHH---HHHHCCSCEECCC-------------------------------CCB-CTTTCSBCHHHHHHHHHH
T ss_pred CCchHHHHHHH---HHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccc-ccccCCcCHHHHHHHHhh
Confidence 55678888874 45567789999999998865421 2234454 3445555 555678999999998853
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecCcc
Q psy14428 307 MPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSK 385 (583)
Q Consensus 307 ~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 385 (583)
.+++++++++++||+. . ++++|.++|+++|+++++|+++. ++...+. .+.++ + .--+++.|+||
T Consensus 202 --~~~klIi~~~s~~~~~--~---dl~~i~~ia~~~g~~livD~Ah~~glv~~g~--~~~~~----~--~aDiv~~S~hK 266 (490)
T 2a7v_A 202 --FRPRLIIAGTSAYARL--I---DYARMREVCDEVKAHLLADMAHISGLVAAKV--IPSPF----K--HADIVTTTTHK 266 (490)
T ss_dssp --HCCSEEEECCSSCCSC--C---CHHHHHHHHHHTTCEEEEECGGGHHHHHTTS--SCCGG----G--TCSEEEEESSG
T ss_pred --cCCcEEEEcCCCCCCc--c---cHHHHHHHHHHcCCEEEEccccccccccCCc--CCCCC----C--CCCEEEECCcc
Confidence 2457888899999963 3 36788999999999999999953 4433331 11122 1 12378899999
Q ss_pred cccccCccceEEEE
Q psy14428 386 NMGLYGERVGTFSV 399 (583)
Q Consensus 386 ~~~l~GlRiG~lv~ 399 (583)
++ .|.|.|++++
T Consensus 267 ~l--~Gp~GG~i~~ 278 (490)
T 2a7v_A 267 TL--RGARSGLIFY 278 (490)
T ss_dssp GG--CSCSCEEEEE
T ss_pred cC--ccccchheee
Confidence 87 5789999999
No 222
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.50 E-value=1.3e-13 Score=147.26 Aligned_cols=153 Identities=10% Similarity=-0.022 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEEE
Q psy14428 209 AKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGA 284 (583)
Q Consensus 209 ~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~ 284 (583)
.++++.++++++ . ++++|++ ++|++.+.+.+...+ .+ .+||+|++++|+|+.+...+ +..|++++.
T Consensus 111 ~~~~~~la~~~g----~--~~~~i~~--~~g~taa~ea~~~a~-~~-~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~ 180 (438)
T 1wyu_A 111 FEYQTMIAELAG----L--EIANASM--YDGATALAEGVLLAL-RE-TGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT 180 (438)
T ss_dssp HHHHHHHHHHHT----S--SEECSCB--SSHHHHHHHHHHHHH-HH-HTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhC----C--CccceEE--eCcHHHHHHHHHHHH-hc-CCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence 455666666653 3 4678889 999995444432222 22 45999999999999998665 447999999
Q ss_pred EecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec---cCCCCCCCCCC
Q psy14428 285 YRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDM---AYLGLTSGDFD 361 (583)
Q Consensus 285 v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De---~Y~~l~~~~~~ 361 (583)
++. +. +.+|++. + .++++++++++| ||||.+.+ +++|+++|+++|+++|+|- +|..+.
T Consensus 181 v~~-~~--~~~d~~~----i---~~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~~----- 241 (438)
T 1wyu_A 181 LPL-EG--GRTPLPE----V---GEEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVLK----- 241 (438)
T ss_dssp ECC-BT--TBCCCCC----C---CTTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTBC-----
T ss_pred EcC-cC--CccCHHH----h---CCCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCcC-----
Confidence 987 32 4567665 3 567899999999 99999985 6777888999999999662 233221
Q ss_pred CchHHHHHHHHhcCcEEEEecCcccc----cccCccceEEEE
Q psy14428 362 KDAFSLRYFAKEVGQLCLAQSFSKNM----GLYGERVGTFSV 399 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~vi~i~S~SK~~----~l~GlRiG~lv~ 399 (583)
. + .. ....+ ++.| ||.| ++.|.|+||+++
T Consensus 242 --~-~-~~---~g~D~-~~~s-~kk~~~~~~~~Gp~~G~l~~ 274 (438)
T 1wyu_A 242 --P-P-GA---YGADI-AVGD-GQSLGLPMGFGGPHFGFLAT 274 (438)
T ss_dssp --C-H-HH---HTCSE-EEEE-CTTTTCCCGGGCSCCEEEEE
T ss_pred --C-C-cc---CCCCE-EEEC-CcccCCCccCCCCCeeEEEE
Confidence 1 1 11 12234 4444 5654 466789999999
No 223
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.48 E-value=1.2e-13 Score=149.00 Aligned_cols=251 Identities=12% Similarity=0.016 Sum_probs=155.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhcc---CCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEK---NLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG 237 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~---~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t 237 (583)
.+...+|+..|.+....|. ..+.+.+++.+.... .....|.. ....+|++++++.+.+..+ ...++|++ +
T Consensus 61 dG~~ylD~~~g~~~~~lGh--~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f--~ 133 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGY--SHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLIT--M 133 (472)
T ss_dssp TSCEEEESSHHHHTCSSCB--TCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEE--E
T ss_pred CCCEEEECCCCHhhcccCC--CCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEE--e
Confidence 4557899998888655564 357788877665422 11112332 3457899999997765432 35679999 9
Q ss_pred CCchhHHHHHHHHHHHh-----C-----------------CCC---CEEEEcCCCChhhHHHHh-hcCCe----------
Q psy14428 238 ISGSGSLRVGTAFLERF-----Y-----------------PGV---KTVYFPTPTWNGHVRFCT-DSRLN---------- 281 (583)
Q Consensus 238 ~G~~~al~l~~~~l~~~-----~-----------------~~g---d~Vlv~~P~y~~~~~~~~-~~G~~---------- 281 (583)
+||++|++.+..++... . .+| +.|++.+++|..+..... ..|..
T Consensus 134 ~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~ 213 (472)
T 1ohv_A 134 ACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSF 213 (472)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCC
T ss_pred CCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCC
Confidence 99999999976554321 0 135 899999999988655442 22321
Q ss_pred ---EEEEeccc-C--CC--C-----CCChhhHHHHHHcCC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCe
Q psy14428 282 ---VGAYRYFD-N--KT--N-----GLDFAGMMEDIKAMP---ERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHL 344 (583)
Q Consensus 282 ---~~~v~~~d-~--~~--~-----g~d~~~l~~~l~~~~---~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i 344 (583)
.+++|... + .. + ..|++.+++.+.... .+++++++...+|+||. ..+++.+++|.++|+++|+
T Consensus 214 ~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ 293 (472)
T 1ohv_A 214 DWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGC 293 (472)
T ss_dssp CCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTC
T ss_pred CCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 11222100 0 00 0 114677777775321 16778877767888996 5789999999999999999
Q ss_pred EEEEeccCCCCCCCCCCCchHHHHHHHHhcCcE--EEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccc
Q psy14428 345 YPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQL--CLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFY 422 (583)
Q Consensus 345 ~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v--i~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~ 422 (583)
++|+||+|.+|...+ ....... .+.. +-+.||||.+ +.| ||++ + +++. .+........
T Consensus 294 lli~DEv~~g~g~~g---~~~~~~~----~gv~~~~Di~t~sK~~-l~G---G~~~---~-----~~~~-~~~~~~~~~T 353 (472)
T 1ohv_A 294 AFLVDEVQTGGGSTG---KFWAHEH----WGLDDPADVMTFSKKM-MTG---GFFH---K-----EEFR-PNAPYRIFNT 353 (472)
T ss_dssp EEEEECTTTTTTTTS---SSSGGGG----GCCSSCCSEEEECGGG-SSE---EEEE---C-----GGGS-CSSSSSSCCS
T ss_pred EEEEeCcccCCCCCC---Cchhccc----cCCCCCCCEEEEcccc-ccC---CccC---c-----hhhc-ccccccccCc
Confidence 999999999877654 1111111 1111 3355899995 345 6664 3 1332 1222222334
Q ss_pred cCCChHHHHHHHHHhC
Q psy14428 423 SNPPIHGARIVTEILS 438 (583)
Q Consensus 423 ~~~s~~~q~~~~~~l~ 438 (583)
++.++++|.++...++
T Consensus 354 ~~~~~~~~aaa~aal~ 369 (472)
T 1ohv_A 354 WLGDPSKNLLLAEVIN 369 (472)
T ss_dssp SSSCHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHH
Confidence 5678888888776664
No 224
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.47 E-value=2e-13 Score=153.68 Aligned_cols=176 Identities=13% Similarity=0.016 Sum_probs=124.6
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH-HhhcCCeE
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF-CTDSRLNV 282 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~~~ 282 (583)
+..-..++++.+|++++.. ..+++ ++|+++++..+ +..++.+||.|+++.|+|..+... ++..|+++
T Consensus 171 ~~~~i~e~e~~lA~~~gae-------~~i~v--~nGtt~an~~a---i~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~ 238 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNAD-------KTYFV--LGGSSNANNTV---TSALVSNGDLVLFDRNNHKSVYNSALAMAGGRP 238 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCS-------EEEEE--SSHHHHHHHHH---HHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEE
T ss_pred ChHHHHHHHHHHHHHHCCC-------cEEEE--CCHHHHHHHHH---HHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEE
Confidence 3334689999999988632 34777 99999999884 455677799999999999988877 88899999
Q ss_pred EEEecccCCCCC----CChhhH-----HHHHHcC------CCCc-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEE
Q psy14428 283 GAYRYFDNKTNG----LDFAGM-----MEDIKAM------PERS-ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYP 346 (583)
Q Consensus 283 ~~v~~~d~~~~g----~d~~~l-----~~~l~~~------~~~~-~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~i 346 (583)
+.++. +.++++ +|++.+ ++++... ..+. +++++++| ||||.+.+ +++|+++|++++++|
T Consensus 239 v~v~~-~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~l 313 (730)
T 1c4k_A 239 VYLQT-NRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYI 313 (730)
T ss_dssp EEECE-EECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEE
T ss_pred EEEeC-CccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeE
Confidence 98877 333344 688888 7777432 1111 78888898 69999976 667889999999999
Q ss_pred EEeccCCCC-CCCCCCCchHHHHH--HHHhcCcEEEEecCcccccccCccceEEE
Q psy14428 347 FFDMAYLGL-TSGDFDKDAFSLRY--FAKEVGQLCLAQSFSKNMGLYGERVGTFS 398 (583)
Q Consensus 347 I~De~Y~~l-~~~~~~~~~~~~~~--~~~~~~~vi~i~S~SK~~~l~GlRiG~lv 398 (583)
++||+|... .+.+......++.. +.....+++++.|+||++ +|++.|.++
T Consensus 314 ivDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I 366 (730)
T 1c4k_A 314 EFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQI 366 (730)
T ss_dssp EEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEE
T ss_pred EEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEE
Confidence 999999742 34320000011100 001134789999999975 688876555
No 225
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.46 E-value=3.4e-13 Score=145.83 Aligned_cols=277 Identities=10% Similarity=-0.052 Sum_probs=181.0
Q ss_pred ChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC--------CCeEEEecCCchhHHHHHHHHHHHh
Q psy14428 183 LPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD--------NRLAIVQGISGSGSLRVGTAFLERF 254 (583)
Q Consensus 183 ~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~--------~~I~i~~t~G~~~al~l~~~~l~~~ 254 (583)
+..+.+.+......+ ...|....+..+|++.+++|+.+..|.+... ...++ |+||++|+.++....+..
T Consensus 92 ~~~~~~~~~~~~n~~-~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~--~~ggt~an~~al~~ar~~ 168 (481)
T 4e1o_A 92 PSLLGDMLADAINCL-GFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVL--QSTVSESTLIALLAARKN 168 (481)
T ss_dssp HHHHHHHHHHHHCCC-CSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEE--ESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcc-cCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEE--eCchHHHHHHHHHHHHHH
Confidence 345666666666443 5678888899999999999998877765332 36778 999999987763332211
Q ss_pred --------C--------CCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEE
Q psy14428 255 --------Y--------PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFL 315 (583)
Q Consensus 255 --------~--------~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~ 315 (583)
. .+++.|+++++++..+...++..|++++.+|. | +++.+|++.+++++++. ...+++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~-~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv 246 (481)
T 4e1o_A 169 KILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPV-D-DNFSLRGEALQKAIEEDKQRGLVPVFVC 246 (481)
T ss_dssp HHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECC-C-TTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEc-C-CCCcCCHHHHHHHHHHHHhCCCCcEEEE
Confidence 0 14789999999999999999999999999998 5 35789999999998643 12367788
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccce
Q psy14428 316 QTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVG 395 (583)
Q Consensus 316 i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG 395 (583)
.+.++|+||.+ +.+++|+++|++||+++++|.+|........ .......-.+. -. .+..+++|.++.| .-+|
T Consensus 247 ~~~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~~--~~~~~~~gi~~-aD-si~~~~hK~l~~p-~g~g 318 (481)
T 4e1o_A 247 ATLGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLCP--EFRGFLKGIEY-AD-SFTFNPSKWMMVH-FDCT 318 (481)
T ss_dssp EEBSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGSG--GGGGGGTTGGG-CS-EEEECHHHHSSCC-SSCE
T ss_pred EecCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhCh--hhHHHhcCccc-CC-EEEEChHHhcCCC-CceE
Confidence 89999999977 4577889999999999999999987643220 11111000111 12 3556899999865 5678
Q ss_pred EEEEEcCCchhHHHHHH-HHHHHHhcc------------------ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHH
Q psy14428 396 TFSVLTPTSDETERIMS-QLKILIRGF------------------YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQL 456 (583)
Q Consensus 396 ~lv~~~p~~~~~~~li~-~l~~~~~~~------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l 456 (583)
++++ .++ .++. .+....... ......+.++++...+....+++.+++..+..+.+
T Consensus 319 ~l~~--~~~----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l 392 (481)
T 4e1o_A 319 GFWV--KDK----YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYF 392 (481)
T ss_dssp EEEE--SBH----HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE--eCH----HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 8888 542 3332 221100000 00124566777777776666666666655555555
Q ss_pred HHHHhh--ccCC-CccchhhHHHHh
Q psy14428 457 KILIRG--FYSN-PPIHGARIVTEI 478 (583)
Q Consensus 457 ~~~~r~--~~~~-~p~~g~~i~~~~ 478 (583)
.+.++. .+.. .|...+.+++.+
T Consensus 393 ~~~L~~~~g~~~~~~~~~~~v~f~~ 417 (481)
T 4e1o_A 393 ESLVRNDPSFEIPAKRHLGLVVFRL 417 (481)
T ss_dssp HHHHHTCTTEECCSCCCSSEEEEEE
T ss_pred HHHHhcCCCeEEecCCceeEEEEEe
Confidence 555443 3332 333444444444
No 226
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.41 E-value=1.4e-12 Score=140.67 Aligned_cols=259 Identities=10% Similarity=-0.090 Sum_probs=168.8
Q ss_pred hHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-------CCeEEEecCCchhHHHHHHHHHHHh--
Q psy14428 184 PSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKD-------NRLAIVQGISGSGSLRVGTAFLERF-- 254 (583)
Q Consensus 184 ~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~-------~~I~i~~t~G~~~al~l~~~~l~~~-- 254 (583)
..+.+.+......+ ...|....+..+|++.+++|+.+..|.+... ...++ |+||++|..++....+..
T Consensus 88 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~--t~ggt~anl~al~~ar~~~~ 164 (475)
T 3k40_A 88 AIVADMLSGAIACI-GFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVI--QGTASESTLVALLGAKAKKL 164 (475)
T ss_dssp HHHHHHHHHHHCCC-SSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEE--ESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcc-ccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEE--cCchHHHHHHHHHHHHHHHH
Confidence 45555666555432 5668888899999999999998887765332 36788 999999977653332211
Q ss_pred ------C--------CCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEEEEeC
Q psy14428 255 ------Y--------PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSILFLQT 317 (583)
Q Consensus 255 ------~--------~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~i~i~ 317 (583)
. .+++.|+++++++..+...++..|++++.+|+ |+ ++ +|++.+++.|... ...+++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~-d~-~~-~d~~~L~~~i~~~~~~~~~~~~v~~~ 241 (475)
T 3k40_A 165 KEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQS-EN-HR-MRGAALEKAIEQDVAEGLIPFYAVVT 241 (475)
T ss_dssp HHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECC-BT-TB-CCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEEC-CC-CC-cCHHHHHHHHHHHHHCCCccEEEEEE
Confidence 0 12578999999999999999999999999999 54 35 9999999998643 2236778889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEE
Q psy14428 318 SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTF 397 (583)
Q Consensus 318 ~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~l 397 (583)
.++|+||.+- .+++|+++|+++|+++++|++|........ ....... ....--.+..|++|.++ ....+|++
T Consensus 242 ~~~t~~G~~~---~l~~I~~la~~~~~~lhvD~A~~~~~~~~~--~~~~~~~--gi~~~Ds~~~~~hK~l~-~p~g~g~l 313 (475)
T 3k40_A 242 LGTTNSCAFD---YLDECGPVGNKHNLWIHVDAAYAGSAFICP--EYRHLMK--GIESADSFNFNPHKWML-VNFDCSAM 313 (475)
T ss_dssp BSCTTTCCBC---CHHHHHHHHHHTTCEEEEECTTGGGGGGSG--GGGGGGT--TGGGCSEEEECHHHHSS-CCSSCEEE
T ss_pred ecCCCCcCcC---CHHHHHHHHHHhCCeEEEeHHhHHHHHhCH--hhHHHhc--CcccCCEEEECchhccC-CCCceEEE
Confidence 9999999874 577789999999999999999987543210 1111100 00011356688999887 44678999
Q ss_pred EEEcCCchhHHHHHHHHHHHHhcc------------------ccCCChHHHHHHHHHhCChhhhhhhhhHHHHHHHHHHH
Q psy14428 398 SVLTPTSDETERIMSQLKILIRGF------------------YSNPPIHGARIVTEILSDPKLKAQCDETERIMSQLKIL 459 (583)
Q Consensus 398 v~~~p~~~~~~~li~~l~~~~~~~------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 459 (583)
++ .++. .+.+.+....... ......+.++++...+....+++..++..+..+.+.+.
T Consensus 314 ~~--~~~~---~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~ 388 (475)
T 3k40_A 314 WL--KDPS---WVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDL 388 (475)
T ss_dssp EE--SSGG---GC---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EE--eCHH---HHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 88 6543 1222221110000 00013456677777766556666665555555555444
Q ss_pred Hh
Q psy14428 460 IR 461 (583)
Q Consensus 460 ~r 461 (583)
++
T Consensus 389 L~ 390 (475)
T 3k40_A 389 CV 390 (475)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 227
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.37 E-value=3e-12 Score=143.01 Aligned_cols=172 Identities=14% Similarity=0.079 Sum_probs=121.9
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEE
Q psy14428 204 NIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 283 (583)
Q Consensus 204 ~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 283 (583)
|..-..++++.+|++++.. ..+++ ++|++.|+..+ +..++.+||.|+++.|+|..+...+...|++++
T Consensus 193 ~~g~i~eaE~~lA~~fGa~-------~a~~v--~nGts~An~~a---i~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv 260 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNAD-------RSYMV--TNGTSTANKIV---GMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPI 260 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCS-------EEEEE--SSHHHHHHHHH---HHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEE
T ss_pred CcHHHHHHHHHHHHHhCCC-------CceEE--CcHHHHHHHHH---HHHhCCCCCEEEECCCccHHHHHHHHHcCCEEE
Confidence 3334689999999999753 34667 89988888763 555677899999999999999999999999999
Q ss_pred EEecccCCCCCC---------ChhhHHHHHHcCC--CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccC
Q psy14428 284 AYRYFDNKTNGL---------DFAGMMEDIKAMP--ERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAY 352 (583)
Q Consensus 284 ~v~~~d~~~~g~---------d~~~l~~~l~~~~--~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y 352 (583)
.++. +.+++++ |++.+++++++.+ +.++++++++| ||+|.+++.+++ +++|+++ .|++||+|
T Consensus 261 ~v~~-~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I---~ela~~~--~livDEAH 333 (715)
T 3n75_A 261 YFRP-TRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFI---KKTLDVK--SIHFDSAW 333 (715)
T ss_dssp EECC-CBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHH---HHHCCCS--EEEEECTT
T ss_pred EEec-cccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHH---HHHhCcC--cEEEcccc
Confidence 9987 3334554 8999999997542 12347888999 999999986655 5556555 37899999
Q ss_pred CCCC-CCCCCCchHHHHHHHH--hcCc-EEEEecCcccccccCcc-ceEEEE
Q psy14428 353 LGLT-SGDFDKDAFSLRYFAK--EVGQ-LCLAQSFSKNMGLYGER-VGTFSV 399 (583)
Q Consensus 353 ~~l~-~~~~~~~~~~~~~~~~--~~~~-vi~i~S~SK~~~l~GlR-iG~lv~ 399 (583)
.... +.+ ..+....+.. ..+. ++++.|++|++ +|+. .|++++
T Consensus 334 ~~~~~f~~---~~~~~~al~~g~~aD~vii~~~S~hKtL--~gltqgs~i~v 380 (715)
T 3n75_A 334 VPYTNFSP---IYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHV 380 (715)
T ss_dssp CTTGGGSG---GGTTSSTTSSSCCTTCEEEEEECHHHHS--SCCTTCEEEEE
T ss_pred ccccccCC---ccccccccccCcCCCEEEEEEecccccc--cCCCCeeEEEe
Confidence 8653 332 0100111100 0134 37799999996 5763 577777
No 228
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.94 E-value=9.8e-08 Score=101.52 Aligned_cols=262 Identities=13% Similarity=0.075 Sum_probs=162.2
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCc
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISG 240 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~ 240 (583)
.+...||+..|.+....|. -.|.|.+++.+.++..... ..+..-..+|.+.+++.+. ..+.+.+ +++|
T Consensus 85 dG~~ylD~~~g~~~~~lGH--~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~p-------~~~~v~f--~~SG 152 (454)
T 4ao9_A 85 DGHRYADFIAEYTAGVYGH--SAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERFP-------QIEQLRF--TNSG 152 (454)
T ss_dssp TCCEEEESSGGGGTTTTCS--CCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHST-------TCSEEEE--ESSH
T ss_pred CCCEEEEccccHHhhcccC--CCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhCC-------CCCEEEE--eCch
Confidence 4567889988887766665 3477888877776553222 1223334567777776653 2478999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhc------CCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEE
Q psy14428 241 SGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDS------RLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILF 314 (583)
Q Consensus 241 ~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~------G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i 314 (583)
++|.+.+..+.+.... .++|+..+-+|......+... ......+|. + |.+.+++.+++..+...++
T Consensus 153 sEA~e~AiklAr~~tg-r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~----n---d~~~l~~~l~~~~~~iAav 224 (454)
T 4ao9_A 153 TEANLMALTAALHFTG-RRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY----N---DAQTARAQIERHGPEIAVV 224 (454)
T ss_dssp HHHHHHHHHHHHHHHT-CCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT----T---CHHHHHHHHHHTGGGEEEE
T ss_pred HHHHHHHHHHHHhccc-CCeEEEEeCCcCCccccccccccCccCCCCcccCCC----c---hHHHHHHHHhhcCCceEEE
Confidence 9999987666665544 578888888887643211111 112333333 1 7888988887765556666
Q ss_pred EeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCcc
Q psy14428 315 LQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 315 ~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlR 393 (583)
++-.-+.-.|.+ .+++-+++|.++|++||+++|.||+... ..+. ......+ +-.+.++ +++|.+| .|+-
T Consensus 225 IvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G~----~~a~e~~-gv~PDi~---t~gK~lg-gG~P 294 (454)
T 4ao9_A 225 LVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLAP----HGLANKL-GIRSDLT---TLGKYIG-GGMS 294 (454)
T ss_dssp EECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGST----TCHHHHH-TCCCSEE---EEEGGGG-TTSS
T ss_pred EeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCcc----ccchhcc-CCCCcEE---EeccccC-CCCc
Confidence 654345556654 4678899999999999999999999864 2221 1112222 2223343 6789998 8999
Q ss_pred ceEEEEEcCCchhHHHHHHHHHHHH----hccccCCChHHHHHHHHH---hCChhhhhhhhhHH-HHHHHHHHH
Q psy14428 394 VGTFSVLTPTSDETERIMSQLKILI----RGFYSNPPIHGARIVTEI---LSDPKLKAQCDETE-RIMSQLKIL 459 (583)
Q Consensus 394 iG~lv~~~p~~~~~~~li~~l~~~~----~~~~~~~s~~~q~~~~~~---l~~~~~~~~~~~~~-~~~~~l~~~ 459 (583)
+|.+++ . +++++.+.... ...+++.++++..++.+. ++++.+.+++.++- .+.+.++.+
T Consensus 295 iga~~~--~-----~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l 361 (454)
T 4ao9_A 295 FGAFGG--R-----ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNAL 361 (454)
T ss_dssp CEEEEE--C-----HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeee--H-----HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 999999 6 57877765321 112345566666655544 45655544444432 333444444
No 229
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.87 E-value=2.6e-08 Score=104.06 Aligned_cols=222 Identities=14% Similarity=0.080 Sum_probs=135.6
Q ss_pred HHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhC---CCCCEEEEcCCCChhhHHHHhhcCCeEEEEec-ccCC
Q psy14428 216 AQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFY---PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY-FDNK 291 (583)
Q Consensus 216 a~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~---~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~d~~ 291 (583)
.+|++.. |++. ....++ ++|+++++..+ ++..+. +.+|.|+++.-+.......+...|++++.++. .+++
T Consensus 123 ld~L~~~-G~~~-~~~~fl--VnGsTgg~lam--ilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~ 196 (501)
T 3hl2_A 123 LDIIKLA-GVHT-VANCFV--VPMATGMSLTL--CFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGD 196 (501)
T ss_dssp HHHHHHT-TCTT-CCEEEE--ESSCHHHHHHH--HHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETT
T ss_pred HHHHHHc-CCCC-CCcEEE--ECcHHHHHHHH--HHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeeccc
Confidence 3444443 6552 234666 89999666553 344433 23599999999999899999999999998865 2334
Q ss_pred CCCCChhhHHHHHHcCCCCcEEEEeC-CCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHH
Q psy14428 292 TNGLDFAGMMEDIKAMPERSILFLQT-SSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYF 370 (583)
Q Consensus 292 ~~g~d~~~l~~~l~~~~~~~~~i~i~-~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~ 370 (583)
..++|++.++++|++.....+++++. ++.|-.+.+ +.+++|+++|.+||+++++|++|+...... ...+ .+.
T Consensus 197 ~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~---~~lp-~sA 269 (501)
T 3hl2_A 197 ELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKC---MHLI-QQG 269 (501)
T ss_dssp EEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHH---HHHH-HHH
T ss_pred ccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhh---hhhH-HHH
Confidence 57899999999998764344454444 444432232 468888999999999999999997654110 1111 122
Q ss_pred HHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhCChhhhhhhhhHH
Q psy14428 371 AKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILSDPKLKAQCDETE 450 (583)
Q Consensus 371 ~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 450 (583)
.+.+.--+++.|.-|++-+| +. |.+++. .+ +++++++...-.-..++.+.+.-+++...+....|++.+++..
T Consensus 270 ~~~GrAD~vVqS~HK~llvp-IG-G~ii~~-~d----~e~l~~~~~~yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ 342 (501)
T 3hl2_A 270 ARVGRIDAFVQSLDKNFMVP-VG-GAIIAG-FN----DSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERK 342 (501)
T ss_dssp HHHSCCCEEEEEHHHHHCCC-SS-CEEEEE-SC----HHHHHHHHHTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCcEEEecccccceee-cC-ceEEEe-CC----HHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221346888899998544 22 445431 44 4677776543211123444444555555555556666665555
Q ss_pred HHHHHHH
Q psy14428 451 RIMSQLK 457 (583)
Q Consensus 451 ~~~~~l~ 457 (583)
.....+.
T Consensus 343 ela~~L~ 349 (501)
T 3hl2_A 343 EMFSYLS 349 (501)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 230
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.67 E-value=4.7e-07 Score=95.55 Aligned_cols=189 Identities=14% Similarity=0.057 Sum_probs=116.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHH-HHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEec-
Q psy14428 210 KFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRV-GTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY- 287 (583)
Q Consensus 210 ~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l-~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~- 287 (583)
.+.+.+..++.+..|.+ ...-.++ ++|+|++... +...++....+++.|+++.-+.......+...|+.++.++.
T Consensus 98 ~~e~~~~~~~~~~lGlp-~~~~~~l--V~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~ 174 (450)
T 3bc8_A 98 KITNSLVLNVIKLAGVH-SVASCFV--VPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV 174 (450)
T ss_dssp HHHHHHHHHHHHHHTCT-TCCEEEE--ESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHhCCCC-CCceEEE--ECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEee
Confidence 34445555554433443 1223566 8888844444 32233333334799999988999999999999999888754
Q ss_pred ccCCCCCCChhhHHHHHHcCCCCcEEEEeCCC-CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHH
Q psy14428 288 FDNKTNGLDFAGMMEDIKAMPERSILFLQTSS-HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFS 366 (583)
Q Consensus 288 ~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p-~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~ 366 (583)
.+++..++|++.++++|++.....+++++.+| .|.+|.+ +.+++|+++|++||+++++|++|+..... ...
T Consensus 175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~-----~~~ 246 (450)
T 3bc8_A 175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSK-----CMH 246 (450)
T ss_dssp EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHH-----HHH
T ss_pred ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhh-----hHh
Confidence 12335789999999999765422344444443 3344444 45788899999999999999999864321 111
Q ss_pred H-HHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHH
Q psy14428 367 L-RYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKI 416 (583)
Q Consensus 367 ~-~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~ 416 (583)
+ .+..+...--.++.|.-|++. .-.-.+++.. .+ ++.++++..
T Consensus 247 l~~~a~~~~~AD~~v~S~HK~l~-a~~~~~~l~~--rd----~~~~~~~~~ 290 (450)
T 3bc8_A 247 LIQQGARVGRIDAFVQSLDKNFM-VPVGGAIIAG--FN----EPFIQDISK 290 (450)
T ss_dssp HHHHHHHHSCCCEEEEEHHHHHS-CCSSCEEEEE--SC----HHHHHHHHH
T ss_pred HHHHHhcccCCCEEEECCccCCC-chhccEEEEe--cC----HHHHHHHHH
Confidence 1 121121122346688999885 4445566666 54 355666543
No 231
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.32 E-value=5.5e-06 Score=94.71 Aligned_cols=254 Identities=9% Similarity=0.066 Sum_probs=140.7
Q ss_pred CccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhH
Q psy14428 164 KKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGS 243 (583)
Q Consensus 164 ~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~a 243 (583)
..+|+..|.|....|.- ..+.+.+|+.+.++.- .+ +......-+....+|+.+.+..+.. .-+++++ +++|++|
T Consensus 381 ~ylD~~sg~~~~~lGh~-~~p~i~~Ai~~Q~~~l-~h-~~~~~~~~~~~~~Lae~L~~~~p~~-~l~~vff--~~SGSeA 454 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPT-FQAELAREMGYTAARF-GH-VMFPENVYEPALKCAELLLDGVGKG-WASRVYF--SDNGSTA 454 (831)
T ss_dssp EEEETTHHHHTCCCCHH-HHHHHHHHHHHHHHHH-SS-CCCTTEECHHHHHHHHHHHHTTTTT-TCCEEEE--ESSHHHH
T ss_pred heeeecccHhhcCCCCC-CCHHHHHHHHHHHhhc-cc-ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEE--CCChhHH
Confidence 34677777776655542 0367777766655431 11 1101111233334555554322100 1368999 9999999
Q ss_pred HHHHHHHH-HHh-CCC------------CCEEEEcCCCChhh-HHHHhhcCCe---------------E-----------
Q psy14428 244 LRVGTAFL-ERF-YPG------------VKTVYFPTPTWNGH-VRFCTDSRLN---------------V----------- 282 (583)
Q Consensus 244 l~l~~~~l-~~~-~~~------------gd~Vlv~~P~y~~~-~~~~~~~G~~---------------~----------- 282 (583)
.+.+..+. +.. ... ..+|+..+-+|..- ...+...|.. +
T Consensus 455 ~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 534 (831)
T 4a0g_A 455 IEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSN 534 (831)
T ss_dssp HHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEET
T ss_pred HHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccC
Confidence 99876554 222 111 23688778777643 2333332210 0
Q ss_pred --EEEecccCCC---C---CC-C------------------hhhHHHHHHc----C-CCCcEEEEeCC-CCCCCCCCC-C
Q psy14428 283 --GAYRYFDNKT---N---GL-D------------------FAGMMEDIKA----M-PERSILFLQTS-SHNPTGVDL-S 328 (583)
Q Consensus 283 --~~v~~~d~~~---~---g~-d------------------~~~l~~~l~~----~-~~~~~~i~i~~-p~NPTG~~~-s 328 (583)
..++..+.-. . .+ + .+.+++.+++ . ..+..++++-. .++..|... +
T Consensus 535 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~ 614 (831)
T 4a0g_A 535 GSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD 614 (831)
T ss_dssp TEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred CceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence 1122200000 0 00 1 1345555542 1 23344554433 278888665 8
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhH
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDET 407 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~ 407 (583)
++.+++|.++|++||+++|.||++..|...+. ......+ +-.+.++ +|||.++ .| +++|++++ +
T Consensus 615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~---~fa~e~~-gv~PDii---tlsK~L~-gG~~Plgav~~--~----- 679 (831)
T 4a0g_A 615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV---ETTTELL-GCKPDIA---CFAKLLT-GGMVPLAVTLA--T----- 679 (831)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB---SSTHHHH-SSCCSEE---EECGGGG-TTSSCCEEEEE--C-----
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCccccccCCC---chhhHhc-CCCCcEE---EEecccc-cCccCcEEEEE--C-----
Confidence 88999999999999999999999999866541 1222222 2223443 7999998 68 89999999 6
Q ss_pred HHHHHHHHHHH------hccccCCChHHHHHHHHHhC
Q psy14428 408 ERIMSQLKILI------RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 408 ~~li~~l~~~~------~~~~~~~s~~~q~~~~~~l~ 438 (583)
+++++.+.... ....++.+++++.++.+.|+
T Consensus 680 ~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~ 716 (831)
T 4a0g_A 680 DAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQ 716 (831)
T ss_dssp HHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccceeecCCcccHHHHHHHHHHHH
Confidence 57888775421 12345667787777666553
No 232
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=98.30 E-value=3.9e-06 Score=87.09 Aligned_cols=181 Identities=11% Similarity=0.000 Sum_probs=115.3
Q ss_pred CChHHHHHHHHHhccCC--CC------CCCC--CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEec-CCchhHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNL--DH------EYAN--IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQG-ISGSGSLRVGTAF 250 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~--~~------~Y~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t-~G~~~al~l~~~~ 250 (583)
.++.|.+++.+.+.+.. .. ...+ ..-+.+.|+.++++++.. ++++|++ + .|+++++.++
T Consensus 24 ~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~-----~~~evif--~t~~~T~a~n~a--- 93 (377)
T 3e77_A 24 LPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVP-----DNYKVIF--LQGGGCGQFSAV--- 93 (377)
T ss_dssp CCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCC-----TTEEEEE--ESSHHHHHHHHH---
T ss_pred CCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--EcCchHHHHHHH---
Confidence 56788888877664310 00 0000 112356788888888521 2246776 5 7899999986
Q ss_pred HHHhCC--CCCEEEEcCCC-Chh-hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC
Q psy14428 251 LERFYP--GVKTVYFPTPT-WNG-HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVD 326 (583)
Q Consensus 251 l~~~~~--~gd~Vlv~~P~-y~~-~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~ 326 (583)
+..+.. +||+|++..-+ |.. +...++..|..++.++. +. +++.+++.++..+ .++++++.+++..|.||+.
T Consensus 94 ~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~-~~-~~~~~~~~~~~~i---~~~t~lV~~~h~et~tG~~ 168 (377)
T 3e77_A 94 PLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPK-LG-SYTKIPDPSTWNL---NPDASYVYYCANETVHGVE 168 (377)
T ss_dssp HHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCC-CS-SSCSCCCGGGCCC---CTTCSCEEEESEETTTTEE
T ss_pred HHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEecc-CC-CcCCCCChHHhcc---CCCccEEEEeCccCchheE
Confidence 233333 38998766554 322 23455667877777776 43 3566776654333 6778888888888999999
Q ss_pred CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 327 LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 327 ~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
.+. +|+++++++++|-+-.--...= + + +..+ + ++.|--|.+|-+| +|++++
T Consensus 169 ~pi--------i~~~~~~~~~vD~~q~~g~~~i---d---~----~~~~-~-~~~s~~K~~gp~G--~g~l~~ 219 (377)
T 3e77_A 169 FDF--------IPDVKGAVLVCDMSSNFLSKPV---D---V----SKFG-V-IFAGAQKNVGSAG--VTVVIV 219 (377)
T ss_dssp CSS--------CCCCTTCCEEEECTTTTTSSCC---C---G----GGCS-E-EEEEGGGTTSCTT--CEEEEE
T ss_pred chh--------hhccCCCEEEEEcccccCCCCC---c---h----hhcC-E-EEEecccccCCCc--cEEEEE
Confidence 885 3678899999999865433210 1 1 2223 4 6678899999778 588888
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.29 E-value=6.7e-06 Score=87.59 Aligned_cols=253 Identities=11% Similarity=0.024 Sum_probs=146.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCC--CCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNL--DHEYANIGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGI 238 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~--~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~ 238 (583)
.+...+|+..|.+....|.- .+.+.+++.+.+.... ...+.+.....+|-+.+++..-. -..+++.+ ++
T Consensus 62 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~-----~~~~~v~f--~~ 132 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTSVGAS--DPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPG-----DHAKRTVL--FN 132 (456)
T ss_dssp TSCEEEESSHHHHTCTTCTT--CHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSC-----SSCEEEEE--ES
T ss_pred CCCEEEEccccHHHHhcCCC--CHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCC-----CCCcEEEE--eC
Confidence 45567888888776666643 4677777766655411 11222333334555555554321 12357888 89
Q ss_pred CchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH-hhcC-------------CeEEEEecccC---CCCC-CChhhH
Q psy14428 239 SGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TDSR-------------LNVGAYRYFDN---KTNG-LDFAGM 300 (583)
Q Consensus 239 G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-~~~G-------------~~~~~v~~~d~---~~~g-~d~~~l 300 (583)
+|++|.+.+..+.+.... .+.|+..+-+|.+..... ...+ ..+..+|.... .... -+.+.+
T Consensus 133 sGsEA~e~AlklAr~~t~-r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~ 211 (456)
T 4atq_A 133 SGAEAVENAVKVARLATG-RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAA 211 (456)
T ss_dssp SHHHHHHHHHHHHHHHHC-CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHH
T ss_pred ChHHHHHHHHHHHhhhhc-CCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHH
Confidence 999999988766665544 578888888887653222 1111 12444444111 1011 122333
Q ss_pred HHHHH---c-C-CCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhc
Q psy14428 301 MEDIK---A-M-PERSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEV 374 (583)
Q Consensus 301 ~~~l~---~-~-~~~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~ 374 (583)
.+.++ . . .....++++-.-+.-.|. ..+++-+++|.++|++||+++|.||+...|.--+. ......+ +-.
T Consensus 212 ~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~---~~a~e~~-gv~ 287 (456)
T 4atq_A 212 KRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE---WFAVDHE-GVV 287 (456)
T ss_dssp HHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS---SSGGGGT-TCC
T ss_pred HHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc---ccccccc-CCC
Confidence 22222 1 1 223444444333433454 45778999999999999999999999988754331 1111111 112
Q ss_pred CcEEEEecCcccccccCccceEEEEEcCCchhHHHHHHHHHHHHhccccCCChHHHHHHHHHhC
Q psy14428 375 GQLCLAQSFSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILIRGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 375 ~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~~~~~~~~s~~~q~~~~~~l~ 438 (583)
+.++ +++|.+| .|+-+|.+++ . +++++.+........++.++++..++.+.|+
T Consensus 288 PDiv---t~gK~lg-gg~P~~av~~--~-----~~i~~~~~~~~~~~Tf~gnpla~aaala~L~ 340 (456)
T 4atq_A 288 PDII---TMAKGIA-GGLPLSAITG--R-----ADLLDAVHPGGLGGTYGGNPVACAAALAAID 340 (456)
T ss_dssp CSEE---EECGGGG-TTSSCEEEEE--E-----HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred Cchh---hhhhccc-CcCCceeeEe--c-----HHHHhcccccCCCCCCCCChHHHHhhHHHHH
Confidence 3333 5689998 8999999999 5 4677766544333456667777776666554
No 234
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.25 E-value=2e-05 Score=81.41 Aligned_cols=187 Identities=11% Similarity=-0.016 Sum_probs=114.8
Q ss_pred CChHHHHHHHHHhccCC---CC----CC-CC--CCCCHHHHHHHHHHHhCCCCCCCCCCCeE-EEecCCchhHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNL---DH----EY-AN--IGGDAKFCKLAAQLAYGEDFPAFKDNRLA-IVQGISGSGSLRVGTAF 250 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~---~~----~Y-~~--~~G~~~Lr~aia~~~~~~~g~~~~~~~I~-i~~t~G~~~al~l~~~~ 250 (583)
+++.|.+++.+.+.+.. .. .+ .+ ..-+.+.|+.++++++.. ++++|+ + |.|+++++.++
T Consensus 16 ~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~-----~~~~v~f~--t~~~T~a~n~~--- 85 (361)
T 3m5u_A 16 LPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELN-----DDYEVLFL--QGGASLQFAMI--- 85 (361)
T ss_dssp CCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCC-----TTEEEEEE--SSHHHHHHHHH---
T ss_pred CcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCC-----CCceEEEE--cCcHHHHHHHH---
Confidence 66888888877654210 00 01 00 122456778888888531 234554 5 89999999986
Q ss_pred HHHhCCCCCEEE-EcCCCChh-hHHHHhhcCCeEEEEecccCCC-CCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCC
Q psy14428 251 LERFYPGVKTVY-FPTPTWNG-HVRFCTDSRLNVGAYRYFDNKT-NGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDL 327 (583)
Q Consensus 251 l~~~~~~gd~Vl-v~~P~y~~-~~~~~~~~G~~~~~v~~~d~~~-~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~ 327 (583)
+..+. +||++. +.+-.|.. ....++..|+++..++. +... +.++++. + + .++++++.+++..|.||...
T Consensus 86 ~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~-~~~g~~~~~~~~--~-l---~~~t~lv~~~~~e~~tG~~~ 157 (361)
T 3m5u_A 86 PMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVAS-SEESNFDHIPRV--E-F---SDNADYAYICSNNTIYGTQY 157 (361)
T ss_dssp HHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEE-CTTTTSCSCCCC--C-C---CTTSSEEEEESEETTTTEEC
T ss_pred HHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEec-ccCcCCCcCChh--h-c---CCCCCEEEEeCCCCCcceeC
Confidence 33344 478652 22223332 23455677999999998 5432 1145555 3 4 66788888888888999987
Q ss_pred CHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEEEcCCchhH
Q psy14428 328 SEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSVLTPTSDET 407 (583)
Q Consensus 328 s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~~~p~~~~~ 407 (583)
+. +++ +++++++|.+-.--... . +. +. --+++.|--|.+|-+| +|++++ .
T Consensus 158 ~~--------i~~-~~~~~~vD~~q~~g~~~-i--d~-------~~--~d~~~~s~~K~~gp~G--~g~l~~--~----- 207 (361)
T 3m5u_A 158 QN--------YPK-TKTPLIVDASSDFFSRK-V--DF-------SN--IALFYGGVQKNAGISG--LSCIFI--R----- 207 (361)
T ss_dssp SS--------CCC-CSSCEEEECGGGTTSSC-C--CC-------TT--EEEEEEETTTTSSCTT--CEEEEE--E-----
T ss_pred Cc--------ccc-cCCEEEEEcccccCCCC-C--Cc-------cc--CCEEEEechhccCCCc--cEEEEE--c-----
Confidence 62 233 49999999985432221 0 11 11 1267788999998777 588988 5
Q ss_pred HHHHHHHHH
Q psy14428 408 ERIMSQLKI 416 (583)
Q Consensus 408 ~~li~~l~~ 416 (583)
+++.+++..
T Consensus 208 ~~~~~~~~~ 216 (361)
T 3m5u_A 208 KDMLERSKN 216 (361)
T ss_dssp HHHHHHHHT
T ss_pred HHHHhhhcC
Confidence 466666653
No 235
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=98.20 E-value=4.5e-06 Score=87.01 Aligned_cols=158 Identities=9% Similarity=0.029 Sum_probs=102.7
Q ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC-Chh-hHHHHhhcCCeEE
Q psy14428 206 GGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT-WNG-HVRFCTDSRLNVG 283 (583)
Q Consensus 206 ~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~-y~~-~~~~~~~~G~~~~ 283 (583)
.-+.+.|+.++++++.. ++++|++ -|.|+++++.++ +..+..+||+|++..-+ |.. +...++..| ++.
T Consensus 72 ~~~~~ar~~la~ll~~~-----~~~evif-~t~~~T~a~n~a---i~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~ 141 (386)
T 3qm2_A 72 QVAEEAEQDFRDLLNIP-----SNYKVLF-CHGGGRGQFAGV---PLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQ 141 (386)
T ss_dssp -CCHHHHHHHHHHHTCC-----TTEEEEE-EESCTTHHHHHH---HHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEE
T ss_pred HHHHHHHHHHHHHhCCC-----CCceEEE-EcCCchHHHHHH---HHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeE
Confidence 45688999999999631 2246766 148999999986 34445669987643332 332 234456678 888
Q ss_pred EEeccc--CCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCC
Q psy14428 284 AYRYFD--NKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVD-LSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDF 360 (583)
Q Consensus 284 ~v~~~d--~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~-~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~ 360 (583)
.++. + ++...++++.++..+ .++++++.+++-.|.||.. .+.+++ . +++++++|-+-.--...
T Consensus 142 ~v~~-~~~~~G~~~~~~~~~~~l---~~~t~lV~~~h~et~tG~~i~pi~~i---~-----~g~~~~vDa~qs~g~~p-- 207 (386)
T 3qm2_A 142 IIDA-KITVDGKRAVKPMREWQL---SDNAAYLHYCPNETIDGIAIDETPDF---G-----PEVVVTADFSSTILSAP-- 207 (386)
T ss_dssp EEEC-EEEETTEEEECCGGGCCC---CTTCSCEEECSEETTTTEECCCCCCC---C-----TTCCEEEECTTTTTSSC--
T ss_pred EEec-CcccCCCCCCchHHHhhc---CCCCcEEEEECCcCCcCEecCchhhh---c-----CCCEEEEEcccccCCCC--
Confidence 8887 4 221125666665444 5778888889888899996 544443 2 79999999986433221
Q ss_pred CCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 361 DKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
-+ + +..+ + .+.|--|.+|-+| +|++++
T Consensus 208 -id---v----~~~~-~-~~~s~hK~lGP~G--~g~l~v 234 (386)
T 3qm2_A 208 -LD---V----SRYG-V-IYAGAQKNIGPAG--LTLVIV 234 (386)
T ss_dssp -CC---G----GGCS-E-EEEETTTTTCCTT--EEEEEE
T ss_pred -CC---c----cccC-E-EEEecccccCCCc--cEEEEE
Confidence 01 1 2223 4 5588899998667 599988
No 236
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.19 E-value=0.00014 Score=77.76 Aligned_cols=255 Identities=13% Similarity=0.132 Sum_probs=145.6
Q ss_pred CCCCccccCCccccCCCCCCCCChHHHHHHHHHhccCCCCCCCCCCC-CHHHHHHHHHHHhCCCCCCCCCCCeEEEecCC
Q psy14428 161 PHPKKMNLGVGAYRGEDGKPYVLPSVKEAERRIYEKNLDHEYANIGG-DAKFCKLAAQLAYGEDFPAFKDNRLAIVQGIS 239 (583)
Q Consensus 161 ~~~~~i~l~~g~~~~~~~~p~~~~~v~~a~~~~~~~~~~~~Y~~~~G-~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G 239 (583)
.+...+|+..|.+....|.- .+.+.+++.+.++. ...|....| ..+....+|+.+.+.. +..-++|.+ +++
T Consensus 65 dG~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~--l~~~~~~~~~~~~~~~~lAe~L~~~~--p~~~~~v~f--~~s 136 (473)
T 4e3q_A 65 NGRRYLDANSGLWNMVAGFD--HKGLIDAAKAQYER--FPGYHAFFGRMSDQTVMLSEKLVEVS--PFDSGRVFY--TNS 136 (473)
T ss_dssp TCCEEEETTTTTTTCTTCSC--CHHHHHHHHHHHHH--CCCCCCCTTEEEHHHHHHHHHHHHHS--SCSSCEEEE--ESS
T ss_pred CCCEEEEcccCHHHhhccCC--CHHHHHHHHHHHHh--cccccccccccCHHHHHHHHHHHhhC--CCCccEEEE--eCc
Confidence 56678999999887776753 47777777766654 112222222 1233334455443321 123468999 999
Q ss_pred chhHHHHHHHHHHHh-----CCCCCEEEEcCCCChhhHH-HHhhcCC-----------eEEEEecccC---CCCCCC---
Q psy14428 240 GSGSLRVGTAFLERF-----YPGVKTVYFPTPTWNGHVR-FCTDSRL-----------NVGAYRYFDN---KTNGLD--- 296 (583)
Q Consensus 240 ~~~al~l~~~~l~~~-----~~~gd~Vlv~~P~y~~~~~-~~~~~G~-----------~~~~v~~~d~---~~~g~d--- 296 (583)
|++|.+.+..+.+.. .+....|+...-+|..... .+...|- ..+.++..+. ...+-.
T Consensus 137 GsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 216 (473)
T 4e3q_A 137 GSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQ 216 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhH
Confidence 999999876554432 1223577877778766422 2221111 1222322100 001111
Q ss_pred -----hhhHHHHHHcCCC-CcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHH
Q psy14428 297 -----FAGMMEDIKAMPE-RSILFLQTSSHNPTGV-DLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRY 369 (583)
Q Consensus 297 -----~~~l~~~l~~~~~-~~~~i~i~~p~NPTG~-~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~ 369 (583)
.+.+++.+.+... ...++++..-+.-.|. ..+++-+++|.++|+++|+++|.||+...|.--+ .......
T Consensus 217 ~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG---~~fa~e~ 293 (473)
T 4e3q_A 217 FVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTG---NTWGCVT 293 (473)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTS---SSCHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCccc---chhHHHh
Confidence 2334444543333 3444554444444554 4567889999999999999999999999985433 1222222
Q ss_pred HHHhcCcEEEEecCcccccccC-ccceEEEEEcCCchhHHHHHHHHHHHH-------hccccCCChHHHHHHHHHhC
Q psy14428 370 FAKEVGQLCLAQSFSKNMGLYG-ERVGTFSVLTPTSDETERIMSQLKILI-------RGFYSNPPIHGARIVTEILS 438 (583)
Q Consensus 370 ~~~~~~~vi~i~S~SK~~~l~G-lRiG~lv~~~p~~~~~~~li~~l~~~~-------~~~~~~~s~~~q~~~~~~l~ 438 (583)
+ +-.+.++ +++|.++ .| +-+|.+++ . +++.+.+.... ....++.++++..++.+.|+
T Consensus 294 ~-gv~PDi~---t~~K~l~-gG~~Pl~av~~--~-----~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~ 358 (473)
T 4e3q_A 294 Y-DFTPDAI---ISSKNLT-AGFFPMGAVIL--G-----PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAID 358 (473)
T ss_dssp T-TCCCSEE---EECGGGG-TTSSCCEEEEE--C-----HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred c-CCCCChH---Hhccccc-CCCCCcccccc--c-----HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhh
Confidence 2 2233444 4689998 66 99999999 6 57888776532 12244556666666655543
No 237
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=97.94 E-value=7.7e-06 Score=87.08 Aligned_cols=72 Identities=29% Similarity=0.606 Sum_probs=64.9
Q ss_pred ceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhh----cCCCceeeeeccCCC-CcccchhhhHHHHHh
Q psy14428 3 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT----DSRLNVGAYRYFDNK-TNGLDFAGMMEDIKL 75 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~----~~~~~~~~y~~~~~~-~~~~d~~~~~~~~~~ 75 (583)
.+||.|||||+.+++.++..+.++ .+|++++|+|.+|..+++ ..|.++..|+++|+. +.++|++.+.+.++.
T Consensus 122 ~~~t~ggt~al~l~~~~~~~~~~g-d~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~ 198 (448)
T 3meb_A 122 SCQSLSGTGSLHIGFEFLHLWMPK-AEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQS 198 (448)
T ss_dssp EEEESHHHHHHHHHHHHHHHHCTT-CCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHH
T ss_pred EEECCcHHHHHHHHHHHHHHhCCC-CEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHh
Confidence 379999999999998888777666 689999999999999999 999999999999988 889999999887764
No 238
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=97.67 E-value=2.6e-05 Score=81.86 Aligned_cols=71 Identities=23% Similarity=0.455 Sum_probs=64.5
Q ss_pred ceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 3 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
.+||.+|+|||+++..+|.++.+ .+|.+++|+|.+|..+++.+|.++..|+++++.+-++|++.+.+.++.
T Consensus 100 i~~t~G~~~al~~~~~~l~~~~~--d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 170 (405)
T 3k7y_A 100 TIQCIGGTGAIFVLLEFLKMLNV--ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRN 170 (405)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTTC--CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHH
T ss_pred EEEcCchHHHHHHHHHHHHhcCC--CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHh
Confidence 48999999999999999988765 689999999999999999999999999998887789999999887764
No 239
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=97.58 E-value=0.00072 Score=70.54 Aligned_cols=194 Identities=13% Similarity=0.074 Sum_probs=106.0
Q ss_pred CChHHHHHHHHHhccCCCCCCCC------CCCCHHHHHHHHHHHhCCCCCCCCCC--CeEEEecCCchhHHHHHHHHHHH
Q psy14428 182 VLPSVKEAERRIYEKNLDHEYAN------IGGDAKFCKLAAQLAYGEDFPAFKDN--RLAIVQGISGSGSLRVGTAFLER 253 (583)
Q Consensus 182 ~~~~v~~a~~~~~~~~~~~~Y~~------~~G~~~Lr~aia~~~~~~~g~~~~~~--~I~i~~t~G~~~al~l~~~~l~~ 253 (583)
..+.+.+++...+.+....+|+. ..-..++.+...+...+-+|.+.... ||-. -+| ++|... .+..
T Consensus 66 ~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP--~SG-s~AN~a---vy~A 139 (490)
T 3ou5_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQP--YSG-SPANLA---VYTA 139 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCC--SSH-HHHHHH---HHHH
T ss_pred CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCc--CCH-HHHHHH---HHHH
Confidence 56888888877776533334432 22233444433444444444332221 3443 444 445544 3455
Q ss_pred hCCCCCEEEEcCCCChhhHHH----------HhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCC
Q psy14428 254 FYPGVKTVYFPTPTWNGHVRF----------CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPT 323 (583)
Q Consensus 254 ~~~~gd~Vlv~~P~y~~~~~~----------~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPT 323 (583)
+++|||+|+..+..-.++..- +...-.+.+++++ |+++..+|.+.+++..++ .++++|+..--.+|-
T Consensus 140 ll~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~v-d~~t~~IDyd~~~~~A~~--~kPklIi~G~SaY~r 216 (490)
T 3ou5_A 140 LLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALTARL--FRPRLIIAGTSAYAR 216 (490)
T ss_dssp HCC-CCCEECBC----------------------------CBCE-ETTTTEECHHHHHHHHHH--HCCSEEEECCSSCCS
T ss_pred HcCCCCEEEecccCCCCcccccccCCCccccccccccccccccc-CCCCCcccHHHHHHHHhh--cCCCeEEECCccCcc
Confidence 677799999998876665321 1111235677777 777778999999887764 356677765444443
Q ss_pred CCCCCHHHHHHHHHHHHhcCeEEEEeccCC-CCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccCccceEEEE
Q psy14428 324 GVDLSEDQWRQLAVVVKQRHLYPFFDMAYL-GLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYGERVGTFSV 399 (583)
Q Consensus 324 G~~~s~~~~~~l~~~a~~~~i~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~lv~ 399 (583)
.++ ++++.++|.+-|.+++.|-++. +|.-.+.. +.|+. + --|+..|.-|++ +|=|-|.+++
T Consensus 217 --~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~--psP~~-----~-ADvVTtTTHKTL--rGPrGG~Il~ 278 (490)
T 3ou5_A 217 --LID---YARMREVCDEVKAHLLADMAHISGLVAAKVI--PSPFK-----H-ADIVTTTTHKTL--RGARSGLIFY 278 (490)
T ss_dssp --CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSS--CCGGG-----T-CSEEEEESSSTT--CSCSCEEEEE
T ss_pred --ccC---HHHHHHHHhhcccEEEechhhhhhhhccccc--CCccc-----c-ceEEeccccccc--cCCCceEEEe
Confidence 234 4566666778899999999963 33333311 11221 1 236678889997 7999999998
No 240
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=96.80 E-value=0.0009 Score=69.47 Aligned_cols=72 Identities=54% Similarity=0.987 Sum_probs=63.1
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
|||-|||+|+.++...+..+..+..+|.+++|+|.+|..+++..|.++..+++.++...++|++.+.++++.
T Consensus 100 v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 171 (401)
T 7aat_A 100 VQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISK 171 (401)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTT
T ss_pred EecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHh
Confidence 689999999999998887665433789999999999999999999999999998887889999988887754
No 241
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=96.56 E-value=0.0012 Score=69.07 Aligned_cols=72 Identities=33% Similarity=0.714 Sum_probs=63.0
Q ss_pred ceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 3 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
.++|-|||+||.+++.++...-++ .+|.+++|+|.++..+++..|.++..|+++++.+.++|++.+.+.++.
T Consensus 120 i~~t~G~t~al~~~~~~~~~~~~g-d~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 191 (420)
T 4f4e_A 120 TAQALGGTGALKIGADFLRTLNPK-AKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNG 191 (420)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTT
T ss_pred EEECCccHHHHHHHHHHHHHhCCC-CEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHh
Confidence 478899999999998877665566 679999999999999999999999999998888889999988877653
No 242
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=96.43 E-value=0.002 Score=67.10 Aligned_cols=72 Identities=31% Similarity=0.649 Sum_probs=61.6
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
+|+.+||||+.+...++..+.++..+|.+++|+|.++..+++..|.++..++..+....++|++.+.+.++.
T Consensus 108 ~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 179 (409)
T 4eu1_A 108 CQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDK 179 (409)
T ss_dssp EEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHH
T ss_pred eecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHh
Confidence 689999999999988776665444689999999999999999999999999988777788999888776643
No 243
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=96.35 E-value=0.001 Score=70.01 Aligned_cols=68 Identities=18% Similarity=0.291 Sum_probs=59.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+.|-|||+||.++..+|.+ ++ .+|++++|+|.+|..+++..|.++..|++.+..+.++|++.+.+.++
T Consensus 122 ~~t~g~t~al~~~~~~l~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 189 (427)
T 3dyd_A 122 ILTSGCSQAIDLCLAVLAN--PG-QNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLID 189 (427)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCC
T ss_pred EEecCcHHHHHHHHHHhcC--CC-CEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhc
Confidence 6788999999999999865 55 68999999999999999999999999999887788899988766553
No 244
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=95.47 E-value=0.012 Score=61.12 Aligned_cols=70 Identities=36% Similarity=0.837 Sum_probs=57.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+||-|||+|+.++..++..+-++ .+|.+++|+|..+..+++..|.++..++..++.+.++|++.+.+.++
T Consensus 102 ~~t~g~~~a~~~~~~~~~~~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 171 (412)
T 1yaa_A 102 VQSLSGTGALHISAKFFSKFFPD-KLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQ 171 (412)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHH
T ss_pred EeccchHhHHHHHHHHHHHhCCC-CEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHH
Confidence 58999999999997776655456 57999999999999999999999999998666567788877655443
No 245
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=93.91 E-value=0.061 Score=57.62 Aligned_cols=70 Identities=11% Similarity=0.069 Sum_probs=60.9
Q ss_pred eecccchhHHHHHHHHHH-hhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHhh
Q psy14428 4 VQGISGSGSLRVGTAFLE-RFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKLA 76 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~-~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~a 76 (583)
+.|-|||+||.++...|. + ++ .+|++++|+|.++...++..|.++..|+..+..+.++|++.+.+.++.+
T Consensus 161 ~~t~G~~~al~~~~~~l~~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 231 (500)
T 3tcm_A 161 FLTDGASPGVHLMMQLLIRN--EK-DGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDA 231 (500)
T ss_dssp EEESSSHHHHHHHHHHHCCS--TT-EEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHcCC--CC-CEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHH
Confidence 567789999999988874 3 45 6899999999999999999999999999888777799999998888764
No 246
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=93.42 E-value=0.049 Score=55.93 Aligned_cols=69 Identities=36% Similarity=0.686 Sum_probs=55.9
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+||-|||+|+.++...+.++.++ .+|.+++|+|..+...++..|.++..++.....+.++|++.+.+.+
T Consensus 95 ~~~~g~~~a~~~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 163 (394)
T 2ay1_A 95 LATVGGTGALRQALELARMANPD-LRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADL 163 (394)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTT-CCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHH
T ss_pred EecCCchhHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHH
Confidence 47999999999999888765566 5799999999999999999999998888754445667877655443
No 247
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=93.05 E-value=0.091 Score=54.43 Aligned_cols=69 Identities=17% Similarity=0.359 Sum_probs=56.9
Q ss_pred ceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 3 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
.+.|-|||+||.++...+.+ ++ .+|.+++|+|.++..+++..|.++..++..+.. .++|++.+.+.++.
T Consensus 105 i~~t~g~~~al~~~~~~l~~--~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l~~~l~~ 173 (418)
T 3rq1_A 105 SIATAGGTGGIHHLIHNYTE--PG-DEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAFQNRVNE 173 (418)
T ss_dssp EEEESHHHHHHHHHHHHHSC--TT-CEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHHHHHHHH
T ss_pred EEECCchHHHHHHHHHHhcC--CC-CEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHHHHHHHH
Confidence 46788999999999876643 55 689999999999999999999999999876543 68898887777654
No 248
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=92.90 E-value=0.077 Score=54.43 Aligned_cols=70 Identities=36% Similarity=0.853 Sum_probs=58.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-|-|||+|+.++..++...-++ .+|.+++|+|..+...++..|.++..+++.++...++|++.+.+.++
T Consensus 99 ~~t~g~~~a~~~~~~~~~~~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 168 (397)
T 3fsl_A 99 IQTLGGSGALKVGADFLKRYFPE-SGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLK 168 (397)
T ss_dssp EEESHHHHHHHHHHHHHHHHCTT-CCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHT
T ss_pred EEcCCcHHHHHHHHHHHHhcCCC-CeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHH
Confidence 56789999999997766554455 67999999999999999999999999999777778899888776654
No 249
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=92.09 E-value=0.13 Score=53.20 Aligned_cols=71 Identities=39% Similarity=0.914 Sum_probs=55.2
Q ss_pred eecccchhHHHHHHHHHHhhcCCC----eEEecCCCCcCchhhhhhcCCCc-eeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGV----KTVYFPTPTWNGHVRFCTDSRLN-VGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~----~~~~~~~p~w~n~~~~~~~~~~~-~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+||-|||+|+.++..++..+-++. .+|.+++|+|..+...++..|.+ +..++..++...++|++.+.+.++
T Consensus 103 ~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~ 178 (412)
T 1ajs_A 103 VQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLE 178 (412)
T ss_dssp EEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHH
Confidence 689999999999987665443441 46999999999999999999999 999987544456678776655443
No 250
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=92.09 E-value=0.13 Score=52.70 Aligned_cols=69 Identities=30% Similarity=0.637 Sum_probs=55.4
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
++|-|||+|+.++...+..+-++ .+|.+++|+|..+...++..|.++..++.......++|++.+.+.+
T Consensus 98 ~~~~g~~~a~~~~~~~~~~~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 166 (396)
T 2q7w_A 98 AQTPGGTGALRVAADFLAKNTSV-KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSL 166 (396)
T ss_dssp EEESHHHHHHHHHHHHHHHHSCC-CEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHH
T ss_pred EecccchhhHHHHHHHHHHhCCC-CEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHH
Confidence 36899999999999888765566 6799999999999999999999998888753344567877665544
No 251
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=91.01 E-value=0.19 Score=51.93 Aligned_cols=69 Identities=14% Similarity=0.290 Sum_probs=56.3
Q ss_pred ceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 3 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
.+.|-|||.||.++...+.+ ++ .+|.+++|+|..+..+++..|.++..++..+.. .++|++.+.+.++.
T Consensus 104 i~~t~g~~~al~~~~~~~~~--~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~ 172 (413)
T 3t18_A 104 AIATPGGTGAIRSAIFSYLD--EG-DPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDVYKEAIDE 172 (413)
T ss_dssp EEEESHHHHHHHHHHHHHCC--SS-CEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHHHHHHHHH
T ss_pred EEEcCccHHHHHHHHHHhcC--CC-CEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHHHHHHHHH
Confidence 35677899999998876643 55 689999999999999999999999999986554 68898887776653
No 252
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=85.13 E-value=0.63 Score=47.56 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=53.9
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec----cCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY----FDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~----~~~~~~~~d~~~~~~~~~ 74 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..+++ +++.+.++|++.+.+.++
T Consensus 106 ~~~~g~~~a~~~~~~~l~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 177 (407)
T 3nra_A 106 IITPGTQGALFLAVAATVA--RG-DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFK 177 (407)
T ss_dssp EEESHHHHHHHHHHHTTCC--TT-CEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHH
T ss_pred EEeCCcHHHHHHHHHHhCC--CC-CEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHh
Confidence 3466889999988775532 45 68999999999999999999999998887 334667889888776664
No 253
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=80.90 E-value=8.9 Score=40.81 Aligned_cols=118 Identities=9% Similarity=0.128 Sum_probs=74.6
Q ss_pred CCCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC----------C-----EEEEcCCCCh-----------------
Q psy14428 222 EDFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV----------K-----TVYFPTPTWN----------------- 269 (583)
Q Consensus 222 ~~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g----------d-----~Vlv~~P~y~----------------- 269 (583)
.|.+.++++.|.| +.++..++....+.|..+...+ . ..+...|-|+
T Consensus 123 ~Y~L~v~~~~i~I--~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ 200 (525)
T 3gh5_A 123 GYDLITTSNQVTL--TANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDE 200 (525)
T ss_dssp CEEEEECSSEEEE--EESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHH
T ss_pred ceEEEEeCCEEEE--EECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHH
Confidence 3456788889999 8887766666666666665432 1 2355567664
Q ss_pred --hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q psy14428 270 --GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPF 347 (583)
Q Consensus 270 --~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI 347 (583)
.+...+..++.++...-+.|...|.+..+...+.-+. ...+ .-..+.|..+|++++++|++.|++++|-||
T Consensus 201 ik~~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~-Ga~~------~~~~~~~g~YT~~di~eIv~YA~~rgI~VI 273 (525)
T 3gh5_A 201 VKRQIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEI-GSKG------QVGGGPGGYYTQEQFKDIVSYAAERYIEVI 273 (525)
T ss_dssp HHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHT-TTSC------CTTSSCCCCBCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCcEEEEEeccCCccccccccchhhhhc-cCcc------ccCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 2456667778888888886554444444433322211 1110 011234778999999999999999999877
Q ss_pred E
Q psy14428 348 F 348 (583)
Q Consensus 348 ~ 348 (583)
=
T Consensus 274 P 274 (525)
T 3gh5_A 274 P 274 (525)
T ss_dssp E
T ss_pred E
Confidence 4
No 254
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=80.87 E-value=1.7 Score=44.84 Aligned_cols=68 Identities=13% Similarity=0.253 Sum_probs=52.7
Q ss_pred ceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhc-CCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 3 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTD-SRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~-~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
.+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++. .|.++..++.-+.. .++|.+.+.+.++
T Consensus 116 i~~t~g~~~al~~~~~~l~~--~g-d~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~ 184 (430)
T 2x5f_A 116 PIVTNALTHGLSLVGDLFVN--QD-DTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQ 184 (430)
T ss_dssp CEEESHHHHHHHHHHHHHCC--TT-CEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHH
T ss_pred EEEcCCchHHHHHHHHHHhC--CC-CEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHH
Confidence 35677889999999887743 55 6899999999999999999 99998888764432 5678776655443
No 255
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=80.39 E-value=7.1 Score=41.54 Aligned_cols=117 Identities=11% Similarity=0.050 Sum_probs=70.5
Q ss_pred CCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC--------------EEEEcCCCCh-------------------
Q psy14428 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK--------------TVYFPTPTWN------------------- 269 (583)
Q Consensus 223 ~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd--------------~Vlv~~P~y~------------------- 269 (583)
+.+.++++.|.| +..+..++.-..+.|..+...+. ..+...|.|+
T Consensus 100 Y~L~v~~~~i~I--~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik 177 (512)
T 1jak_A 100 YRLDSGPAGVTI--TARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVK 177 (512)
T ss_dssp EEEEEETTEEEE--EESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHH
T ss_pred eEEEEeCCEEEE--EEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHH
Confidence 446677788888 77776666555555555554221 2244556663
Q ss_pred hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 270 GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 270 ~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
.+...+..++.++..+-+.|...+.+..+...+.-+. .... ....+.|..+|++++++|++.|++++|-||-
T Consensus 178 ~~id~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~-ga~~------~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 178 RYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATY-GGST------EVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHT-TTSC------CTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCcEEEEEeccCCCceehhhhhHHHHhh-cCcc------ccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2445566678888887775554444443333222111 1110 1112347899999999999999999998874
No 256
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=79.83 E-value=1.6 Score=46.50 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=55.5
Q ss_pred cccchhHHHHHHHHHHhhcCCC---eEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHhh
Q psy14428 6 GISGSGSLRVGTAFLERFYPGV---KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKLA 76 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~---~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~a 76 (583)
|-++|.||.+....|.+ ++. ..|.+++|+|..+...++..|.++..|+..+...-++|++.+-+.++.+
T Consensus 159 t~G~~~ai~~~~~~l~~--~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~ 230 (498)
T 3ihj_A 159 TTGASDGISTILKILVS--GGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEA 230 (498)
T ss_dssp ESSHHHHHHHHHHHHCC--CCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcC--CCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhh
Confidence 45778888888877654 431 4899999999999999999999999998876656689998887777654
No 257
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=79.52 E-value=4.6 Score=42.93 Aligned_cols=113 Identities=11% Similarity=0.034 Sum_probs=68.6
Q ss_pred CCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCC---CC-----EEEEcCCCCh-------------------hhHHHH
Q psy14428 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG---VK-----TVYFPTPTWN-------------------GHVRFC 275 (583)
Q Consensus 223 ~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~---gd-----~Vlv~~P~y~-------------------~~~~~~ 275 (583)
|.+.++++.|.| ++.+..++....+.|..+... |. ..+...|.|+ .+...+
T Consensus 94 Y~L~v~~~~i~I--~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~m 171 (507)
T 2gjx_A 94 YTLTINDDQCLL--LSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVM 171 (507)
T ss_dssp EEEEESSSCEEE--EESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHH
T ss_pred eEEEEeCCeEEE--EECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHH
Confidence 345677888988 777766666555555555431 11 1234456653 245556
Q ss_pred hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 276 TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 276 ~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
..++.++....+.|...|.+..+...+.-+. .. ..|.|..+|++++++|++.|++++|-||=
T Consensus 172 A~~KlN~lh~HltDdq~wr~ei~~~P~Lt~~-Ga----------~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 172 AYNKLNVFHWHLVDDPSFPYESFTFPELMRK-GS----------YNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp HHTTCCEEEEECCCSSCCCBCCSSCTHHHHH-HS----------SCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCCceEEEEEecccCeeeeccccchhhhc-cc----------cCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 6778888888775544444432222111100 00 12557789999999999999999998774
No 258
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=78.04 E-value=1.2 Score=44.71 Aligned_cols=63 Identities=6% Similarity=-0.032 Sum_probs=48.1
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
-|=|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++. +..+. +|.+.+.+.
T Consensus 87 ~~~g~~~a~~~~~~~l~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~ 149 (365)
T 3get_A 87 IGAGSDQVIEFAIHSKLN--SK-NAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYET 149 (365)
T ss_dssp EESSHHHHHHHHHHHHCC--TT-CEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHhC--CC-CEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHH
Confidence 345788899888776633 55 68999999999999999999999988887 44444 666555443
No 259
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=76.10 E-value=2.5 Score=43.63 Aligned_cols=70 Identities=17% Similarity=0.190 Sum_probs=54.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhh-cCCCceeeeeccCCCCcccchhhhHHHHHhh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT-DSRLNVGAYRYFDNKTNGLDFAGMMEDIKLA 76 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~-~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~a 76 (583)
+-|-|||.|+.++...|.+ ++ .+|.+++|+|..+...+. ..|.++..+++.+...-.+|++.+.+.++.+
T Consensus 115 ~~~~gg~~a~~~~~~~l~~--~g-d~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 185 (435)
T 3piu_A 115 VLTAGATSANETFIFCLAD--PG-EAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEA 185 (435)
T ss_dssp EEEEHHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHH
T ss_pred EEcCChHHHHHHHHHHhcC--CC-CeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHH
Confidence 4466899999999887754 45 689999999999998887 7899999998876544457888777766543
No 260
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=75.47 E-value=1.8 Score=43.95 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=52.5
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+-|||.|+.++...+. .-++ .+|.+++|+|..+...++..|.++..++. ++.+..+|.+.+.+.+
T Consensus 75 i~~~~gt~al~~~l~~~~-~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~ 141 (391)
T 3dr4_A 75 IACNNGTTALHLALVAMG-IGPG-DEVIVPSLTYIASANSVTYCGATPVLVDN-DPRTFNLDAAKLEALI 141 (391)
T ss_dssp EEESSHHHHHHHHHHHHT-CCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCGGGSGGGC
T ss_pred EEeCCHHHHHHHHHHHcC-CCCc-CEEEECCCchHHHHHHHHHCCCEEEEEec-CccccCcCHHHHHHhc
Confidence 456799999999888762 1144 68999999999999999999999887775 4456788888776554
No 261
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=74.78 E-value=2.1 Score=46.00 Aligned_cols=68 Identities=7% Similarity=0.063 Sum_probs=51.0
Q ss_pred eecccchhHHHHHHHHH-Hh-hcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccC--CCCcccchhhhHH
Q psy14428 4 VQGISGSGSLRVGTAFL-ER-FYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD--NKTNGLDFAGMME 71 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~-~~-~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~--~~~~~~d~~~~~~ 71 (583)
+-|-|||.|+.++...| .+ +.....+|.+++|+|..+..+++..|.++..+++.. ..+.++|.+.+.+
T Consensus 168 ~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~ 239 (533)
T 3f6t_A 168 FPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEK 239 (533)
T ss_dssp EEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHH
T ss_pred EEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHH
Confidence 44678999999988753 22 222236899999999999999999999988888765 4556777665443
No 262
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=74.10 E-value=7.5 Score=41.30 Aligned_cols=112 Identities=9% Similarity=0.002 Sum_probs=69.3
Q ss_pred CCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC--E------EEEcCCCCh-------------------hhHHHH
Q psy14428 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK--T------VYFPTPTWN-------------------GHVRFC 275 (583)
Q Consensus 223 ~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd--~------Vlv~~P~y~-------------------~~~~~~ 275 (583)
|.+.++++.|.| ++.+..++....+.|..+...++ . .+...|.|+ .+...+
T Consensus 100 Y~L~v~~~~i~I--~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~m 177 (507)
T 1now_A 100 YTLLVKEPVAVL--KANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAM 177 (507)
T ss_dssp EEEEECSSEEEE--EESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHH
T ss_pred eEEEEcCCeEEE--EECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHH
Confidence 346677888988 87776666666556666554221 1 234456653 245556
Q ss_pred hhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 276 TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 276 ~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
..++.++....+.|...|.+..+...+.-+. .. ..| |..+|++++++|++.|++++|-||=
T Consensus 178 a~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~-Ga----------~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 178 AFNKFNVLHWHIVDDQSFPYQSITFPELSNK-GS----------YSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp HHTTCCEEEEECCCSSCCCBCCSSCHHHHHH-HS----------SST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCCcEEEEeeccCccceeeccchhhhhcc-cC----------cCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6778888888875544444433222221110 00 012 7789999999999999999998773
No 263
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=74.07 E-value=2.1 Score=43.38 Aligned_cols=67 Identities=18% Similarity=0.134 Sum_probs=50.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+-|||.|+.++...+. .-++ .+|.+++|++..+...++..|.++..++. ++.+..+|.+.+.+.+
T Consensus 58 ~~~~~gt~al~~~~~~~~-~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l 124 (393)
T 1mdo_A 58 VAVSSATAGMHIALMALG-IGEG-DEVITPSMTWVSTLNMIVLLGANPVMVDV-DRDTLMVTPEHIEAAI 124 (393)
T ss_dssp EEESCHHHHHHHHHHHTT-CCTT-CEEEEESSSCHHHHHHHHHTTCEEEEECB-CTTTCCBCHHHHHHHC
T ss_pred EEecChHHHHHHHHHHcC-CCCC-CEEEeCCCccHhHHHHHHHCCCEEEEEec-cCCcCCCCHHHHHHhc
Confidence 557799999999988762 1144 67999999999999999999999888774 4444557777665444
No 264
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=73.92 E-value=3.1 Score=41.30 Aligned_cols=64 Identities=14% Similarity=0.244 Sum_probs=50.6
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+ ..++|.+.+.+.++
T Consensus 74 ~~g~~~a~~~~~~~l~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~ 137 (354)
T 3ly1_A 74 TAGSSEGIRAAIEAYAS--LE-AQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVA 137 (354)
T ss_dssp ESHHHHHHHHHHHHHCC--TT-CEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHH
T ss_pred eCChHHHHHHHHHHHhC--CC-CeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhc
Confidence 45788999988887743 45 6799999999999999999999998887642 36788877766554
No 265
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=72.79 E-value=2.5 Score=42.86 Aligned_cols=66 Identities=9% Similarity=-0.008 Sum_probs=50.5
Q ss_pred cccchhHHHHHHHHHHhhcCCC----eEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGV----KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~----~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
|=|||.|+.++...+.+ ++. .+|.+++|+|..+...++..|.++..++. +...-.+|++.+.+.++
T Consensus 97 t~g~~~al~~~~~~~~~--~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d~~~l~~~~~ 166 (396)
T 3jtx_A 97 VLGSREALFSFVQTVLN--PVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPDWRSISEEVW 166 (396)
T ss_dssp ESSHHHHHHHHHHHHCC--C---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCCGGGSCHHHH
T ss_pred cCCcHHHHHHHHHHHhC--CCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccCHHHHHHhhc
Confidence 45778899888877644 432 47999999999999999999999999988 55445578877766553
No 266
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=72.47 E-value=2.7 Score=42.04 Aligned_cols=65 Identities=17% Similarity=0.127 Sum_probs=50.8
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
|=|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+ +..+|.+.+.+.++.
T Consensus 91 ~~g~t~a~~~~~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~ 155 (367)
T 3euc_A 91 GNGSDEIISMLALAAAR--PG-AKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAE 155 (367)
T ss_dssp EEHHHHHHHHHHHHTCC--TT-CEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcC--CC-CEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhc
Confidence 44788888888776633 45 6799999999999999999999998887654 567888877766543
No 267
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=72.36 E-value=2.8 Score=43.17 Aligned_cols=65 Identities=15% Similarity=0.060 Sum_probs=52.1
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+-|||.|+.++...+. ++ .+|.+++|+|..+...++..|.++..++. ++.+..+|.+.+.+.+
T Consensus 71 ~~~~ggt~al~~~l~~l~---~g-d~Vlv~~~~~~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i 135 (424)
T 2po3_A 71 VATCNATAGLQLLAHAAG---LT-GEVIMPSMTFAATPHALRWIGLTPVFADI-DPDTGNLDPDQVAAAV 135 (424)
T ss_dssp EEESCHHHHHHHHHHHHT---CC-SEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTSSBCHHHHGGGC
T ss_pred EEeCCHHHHHHHHHHHcC---CC-CEEEECCCccHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHhh
Confidence 567799999999998874 45 68999999999999999999999888775 3445667877665543
No 268
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=72.22 E-value=1.7 Score=44.11 Aligned_cols=65 Identities=15% Similarity=0.079 Sum_probs=49.2
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
+-|-|||.||.++..-+.+ ++ .+|.+++|+|..+..+++..|.++..++.-+...-.+|.+.+.+
T Consensus 95 ~~t~g~~~al~~~~~~l~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (385)
T 1b5p_A 95 IVTVGGSQALFNLFQAILD--PG-DEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRR 159 (385)
T ss_dssp EEESHHHHHHHHHHHHHCC--TT-CEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHT
T ss_pred EEcCChHHHHHHHHHHhcC--CC-CEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHH
Confidence 3466889999998876633 55 67999999999999999999999888876432334567665543
No 269
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=72.12 E-value=2.9 Score=42.46 Aligned_cols=66 Identities=15% Similarity=0.154 Sum_probs=50.9
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
-|-|||.|+.++...+.+ ++..+|.+++|+|..+...++..|.++..++. ++...++|++.+.+.+
T Consensus 104 ~~~g~~~al~~~~~~l~~--~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l 169 (398)
T 3ele_A 104 MTMGAAASLSICFRALTS--DAYDEFITIAPYFPEYKVFVNAAGARLVEVPA-DTEHFQIDFDALEERI 169 (398)
T ss_dssp EESSHHHHHHHHHHHHCC--STTCEEEEESSCCTHHHHHHHHTTCEEEEECC-CTTTSSCCHHHHHHTC
T ss_pred EccCHHHHHHHHHHHHcC--CCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CCcCCcCCHHHHHHHh
Confidence 355779999998887733 44147999999999999999999999998887 4445678887766544
No 270
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=71.86 E-value=2.9 Score=42.09 Aligned_cols=66 Identities=9% Similarity=0.118 Sum_probs=51.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc--CCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF--DNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~--~~~~~~~d~~~~~~~~~ 74 (583)
|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.- +..+-.+|.+.+.+.++
T Consensus 96 ~~g~~~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 163 (391)
T 4dq6_A 96 SPGVIPAISLLINELTK--AN-DKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIK 163 (391)
T ss_dssp ESCHHHHHHHHHHHHSC--TT-CEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT
T ss_pred cCChHHHHHHHHHHhCC--CC-CEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh
Confidence 45788899988887743 55 689999999999999999999999888764 44444578777766554
No 271
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=71.59 E-value=2.8 Score=42.09 Aligned_cols=62 Identities=8% Similarity=0.084 Sum_probs=50.1
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+. +|.+.+.+.++
T Consensus 87 t~g~~~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~ 148 (377)
T 3fdb_A 87 IPDVVRGLYIAIDHFTP--AQ-SKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQ 148 (377)
T ss_dssp ESCHHHHHHHHHHHHSC--TT-CCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHH
T ss_pred eCChHHHHHHHHHHhcC--CC-CEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhc
Confidence 45789999988887744 55 67999999999999999999999988887654 88877766654
No 272
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=71.40 E-value=1.3 Score=45.99 Aligned_cols=58 Identities=7% Similarity=-0.078 Sum_probs=40.9
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCc--eeeeeccCCCCcccchh
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLN--VGAYRYFDNKTNGLDFA 67 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~--~~~y~~~~~~~~~~d~~ 67 (583)
|-|||.|+.+...++ + ++ .+|.+++|+|.++...++..|.+ +..|+|++.....+|.+
T Consensus 138 t~G~~~al~~~~~l~-~--~g-d~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~ 197 (449)
T 3qgu_A 138 SDGSKCDIARIQMMF-G--SK-PTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPD 197 (449)
T ss_dssp ESCHHHHHHHHHHHH-C--SS-SCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGG
T ss_pred ccCHHHHHHHHHHHh-C--CC-CEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccc
Confidence 457788888773333 2 45 67999999999999999999987 55566655444444443
No 273
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=68.90 E-value=9.9 Score=42.91 Aligned_cols=124 Identities=10% Similarity=0.038 Sum_probs=73.0
Q ss_pred CCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCC------EEEEcCCCCh-------------------hhHHHHhh
Q psy14428 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVK------TVYFPTPTWN-------------------GHVRFCTD 277 (583)
Q Consensus 223 ~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd------~Vlv~~P~y~-------------------~~~~~~~~ 277 (583)
|.+.++++.|.| +..+..++....+.|..+...++ ..+...|.|+ .+...+..
T Consensus 262 Y~L~v~~~~i~I--~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~ 339 (858)
T 1c7s_A 262 YELKIGKKEAQV--IGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAA 339 (858)
T ss_dssp EEEEECSSCEEE--EESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHH
T ss_pred eEEEEeCCeEEE--EEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHH
Confidence 446677788988 77776666666556666555333 1344567765 34556677
Q ss_pred cCCeEEEEecccCCCCCCChhhHHHHHHcCCCC-----cEEEEeCCC-C--CCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 278 SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPER-----SILFLQTSS-H--NPTGVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 278 ~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~-----~~~i~i~~p-~--NPTG~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
++.++..+.+.|...|.+......+.-+.-..+ -.-.+.+.- + .|.|..+|.+++++|++.|++++|-||=
T Consensus 340 ~KlN~lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 340 YKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp TTCCEEEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred hCCcEEEEEeccCccccccccCCchhhhccccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 788888887766544545443332221100000 000000100 1 1457799999999999999999997773
No 274
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=68.73 E-value=3.2 Score=42.04 Aligned_cols=63 Identities=14% Similarity=-0.003 Sum_probs=48.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
+-|=|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..+++-....-.+|.+.+
T Consensus 95 ~~t~g~~~al~~~~~~l~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 157 (391)
T 3h14_A 95 VITPGSSGGFLLAFTALFD--SG-DRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADF 157 (391)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHH
T ss_pred EEecChHHHHHHHHHHhcC--CC-CEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHH
Confidence 3456889999998877643 55 689999999999999999999999988875433334565543
No 275
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=67.91 E-value=2.7 Score=41.98 Aligned_cols=63 Identities=16% Similarity=0.132 Sum_probs=50.0
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
|=|||.|+.++..-+.+ ++ .+|.+++|+|..+...++..|.++..++.-. ...+|.+.+.+.+
T Consensus 90 ~~g~t~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i 152 (363)
T 3ffh_A 90 TAGVDELIELLTRVLLD--TT-TNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAI 152 (363)
T ss_dssp ESSHHHHHHHHHHHHCS--TT-CEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHC
T ss_pred eCCHHHHHHHHHHHHcc--CC-CEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhc
Confidence 45788999988876633 45 6899999999999999999999998887753 4678887776654
No 276
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=67.75 E-value=17 Score=35.02 Aligned_cols=101 Identities=9% Similarity=0.059 Sum_probs=62.4
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC--
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-- 307 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-- 307 (583)
..+.+ ..|++.+|=.. +...|...|-.|++.+-.-.......+..|.+...+.. |-. |.+.+++.+++.
T Consensus 29 gKval--VTGas~GIG~a--iA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~-Dv~----~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 29 AKIAV--ITGATSGIGLA--AAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQA-DSA----NLAELDRLYEKVKA 99 (273)
T ss_dssp TCEEE--EESCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEEC-CTT----CHHHHHHHHHHHHH
T ss_pred CCEEE--EeCcCCHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEe-cCC----CHHHHHHHHHHHHH
Confidence 45666 66777777554 44445556888888776655566677777888877776 432 555555444332
Q ss_pred -CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHH
Q psy14428 308 -PERSILFLQTSSHNPTG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 308 -~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~a 339 (583)
-.+..+++.+---++.+ ..++.++|+++++.-
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 23455555443334433 246889999998764
No 277
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=67.70 E-value=6.6 Score=39.80 Aligned_cols=66 Identities=12% Similarity=0.019 Sum_probs=52.6
Q ss_pred eecccchhHHHHHHHHH-HhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFL-ERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~-~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
|-+=|||.||+++..-+ .+ ++ .+|.+++|++.-+...++..|.++..++- |+.+..+|.+.+.+.+
T Consensus 57 v~~~sgt~al~~al~~l~~~--~G-d~Vi~~~~~~~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i 123 (377)
T 3ju7_A 57 TTVANATLGLMAAIQLKKRK--KG-KYALMPSFTFPATPLAAIWCGLEPYFIDI-SIDDWYMDKTVLWDKI 123 (377)
T ss_dssp EEESCHHHHHHHHHHHHSCT--TC-CEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHcCCC--Cc-CEEEECCCCcHHHHHHHHHcCCEEEEEec-CCccCCcCHHHHHHHH
Confidence 55679999999887655 22 45 68999999999999999999998876653 5567789999887766
No 278
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=67.44 E-value=3.9 Score=41.88 Aligned_cols=67 Identities=15% Similarity=0.058 Sum_probs=48.5
Q ss_pred ecccchhHHH--HHHHHHHhhcCC--------CeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 5 QGISGSGSLR--VGTAFLERFYPG--------VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 5 q~~~~tg~~~--~~~~~~~~~~~~--------~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
-|-|||.||. +....+.+..++ ..+|.+++|+|.++..+++..|.++..++.-+. ++|++.+.+.++
T Consensus 92 ~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~ 168 (423)
T 3ez1_A 92 VWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAG 168 (423)
T ss_dssp ECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHH
T ss_pred EeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHh
Confidence 3557788886 555444331132 258999999999999999999999988887653 588887766553
No 279
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=66.73 E-value=5.2 Score=40.29 Aligned_cols=66 Identities=14% Similarity=0.063 Sum_probs=49.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.- +.+.++|.+.+.+.+
T Consensus 95 ~~~~g~~~a~~~~~~~~~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l 160 (386)
T 1u08_A 95 TVTAGATEALYAAITALVR--NG-DEVICFDPSYDSYAPAIALSGGIVKRMALQ-PPHFRVDWQEFAALL 160 (386)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHHHHTTCEEEEEECC-TTTCCCCHHHHHHHC
T ss_pred EEcCChHHHHHHHHHHhCC--CC-CEEEEeCCCchhHHHHHHHcCCEEEEeecC-cccCcCCHHHHHHhh
Confidence 3456788999988887733 45 689999999999999999999998887763 224567777665443
No 280
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=66.33 E-value=2.9 Score=41.96 Aligned_cols=66 Identities=14% Similarity=0.038 Sum_probs=50.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+-|||.|+.++...+. .-++ .+|.+++|++..+...++..|.++..++.- .+..+|.+.+.+.+
T Consensus 57 ~~~~~gt~a~~~~~~~~~-~~~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~ 122 (374)
T 3uwc_A 57 IGVGTGTDALAMSFKMLN-IGAG-DEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAI 122 (374)
T ss_dssp EEESCHHHHHHHHHHHTT-CCTT-CEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGC
T ss_pred EEeCCHHHHHHHHHHHcC-CCCC-CEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhC
Confidence 446689999988877651 1144 689999999999999999999999888765 45677887766544
No 281
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=66.27 E-value=5.9 Score=39.44 Aligned_cols=66 Identities=9% Similarity=-0.027 Sum_probs=49.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++..-.....+|.+.+.+.++
T Consensus 75 ~~g~t~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 140 (371)
T 2e7j_A 75 TNGAREAKFAVMHSLAK--KD-AWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIE 140 (371)
T ss_dssp ESSHHHHHHHHHHHHCC--TT-CEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHH
T ss_pred eCChHHHHHHHHHHHhC--CC-CEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHH
Confidence 44568999999887733 55 68999999999998889999999888873112236678776665554
No 282
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=66.11 E-value=5.1 Score=41.65 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=45.7
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCC-CCcCchh-----------hhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHV-----------RFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~-p~w~n~~-----------~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
|+-|||.|+.++..-+.+ |+ .+|.+++ |+++.+. ..++..|.++...+. .+..+|.+.+.+.
T Consensus 97 ~~~sGt~A~~~al~all~--pG-D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~ 170 (427)
T 3hvy_A 97 HFVNGTHAIGAALFGNLR--PN-DTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEE 170 (427)
T ss_dssp TCCSHHHHHHHHHHHTCC--TT-CEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHhcC--CC-CEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHH
Confidence 378999999877654433 55 6788888 9998887 344556766655554 5678999888777
Q ss_pred HH
Q psy14428 73 IK 74 (583)
Q Consensus 73 ~~ 74 (583)
++
T Consensus 171 i~ 172 (427)
T 3hvy_A 171 LK 172 (427)
T ss_dssp HH
T ss_pred hh
Confidence 65
No 283
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=65.20 E-value=3.7 Score=41.23 Aligned_cols=67 Identities=19% Similarity=0.149 Sum_probs=51.2
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+=|||.|+.++...+. .-++ .+|.+++|++..+...++..|.++..++. |+.+..+|.+.+.+.+
T Consensus 54 ~~~~sGt~al~~al~~~~-~~~g-d~Vi~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~d~~~l~~~i 120 (367)
T 3nyt_A 54 ISCANGTDALQIVQMALG-VGPG-DEVITPGFTYVATAETVALLGAKPVYVDI-DPRTYNLDPQLLEAAI 120 (367)
T ss_dssp EEESCHHHHHHHHHHHTT-CCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCGGGTGGGC
T ss_pred EEeCCHHHHHHHHHHHhC-CCCc-CEEEECCCccHHHHHHHHHcCCEEEEEec-CCccCCcCHHHHHHhc
Confidence 345689999999887662 1244 68999999999999999999998876654 5566778887765544
No 284
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=64.91 E-value=5.7 Score=39.22 Aligned_cols=66 Identities=11% Similarity=-0.019 Sum_probs=51.5
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhh--hhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR--FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~--~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+.. .++..|.++..++. + ..++|.+.+.+.++.
T Consensus 70 ~~~~g~t~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~l~~ 137 (359)
T 1svv_A 70 HFISGGTQTNLIACSLALR--PW-EAVIATQLGHISTHETGAIEATGHKVVTAPC-P--DGKLRVADIESALHE 137 (359)
T ss_dssp EEESCHHHHHHHHHHHHCC--TT-EEEEEETTSHHHHSSTTHHHHTTCCEEEECC-T--TSCCCHHHHHHHHHH
T ss_pred EEeCCchHHHHHHHHHHhC--CC-CEEEEcccchHHHHHHHHHhcCCCeeEEEeC-C--CCeecHHHHHHHHHH
Confidence 4466999999999888744 55 689999999999887 47888999888885 3 467888877666543
No 285
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=64.48 E-value=6 Score=40.16 Aligned_cols=68 Identities=24% Similarity=0.151 Sum_probs=38.1
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhh---hhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~---~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
|..-|||.|+.++...+.+ ++ .+|.+++|+|..|.. .....|..+...++.-..+..+|.+.+.+.++
T Consensus 91 i~~~sGt~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~ 161 (417)
T 3n0l_A 91 VQPNSGSQANQGVYAALIN--PG-DKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAK 161 (417)
T ss_dssp CCCSSHHHHHHHHHHHHSC--TT-CEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHH
T ss_pred eEeccHHHHHHHHHHHhcC--CC-CEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHH
Confidence 5667999999998877633 55 689999999987655 33334444444333323556689888777665
No 286
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=64.21 E-value=4.3 Score=40.83 Aligned_cols=66 Identities=12% Similarity=0.199 Sum_probs=50.2
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc-CCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF-DNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~-~~~~~~~d~~~~~~~~~ 74 (583)
|=|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.- +..+-.+|.+.+.+.++
T Consensus 91 ~~g~~~a~~~~~~~l~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~ 157 (391)
T 3dzz_A 91 ASGVVPAISAMVRQFTS--PG-DQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLA 157 (391)
T ss_dssp ESCHHHHHHHHHHHHSC--TT-CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHhCC--CC-CeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHh
Confidence 44679999988887743 55 689999999999999999999998888764 34333478777666554
No 287
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=63.57 E-value=4 Score=41.35 Aligned_cols=64 Identities=16% Similarity=0.093 Sum_probs=47.8
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+.....+|.+.+.+
T Consensus 106 ~~~g~t~al~~~~~~l~~--~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 169 (389)
T 1o4s_A 106 VTNGAKQALFNAFMALLD--PG-DEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEG 169 (389)
T ss_dssp EESHHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHH
T ss_pred EecCHHHHHHHHHHHhCC--CC-CEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHH
Confidence 356788999998887733 55 68999999999999999999999888876432234566665544
No 288
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=63.04 E-value=5.8 Score=40.34 Aligned_cols=49 Identities=16% Similarity=0.150 Sum_probs=40.4
Q ss_pred eecccchhHHHHHHHHHHhhcCCCe----EEecCCCCcCchhhhhhcCCCceeeee
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVK----TVYFPTPTWNGHVRFCTDSRLNVGAYR 55 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~----~~~~~~p~w~n~~~~~~~~~~~~~~y~ 55 (583)
+-|-++|.||.+....|.+ ++ . +|.+++|+|..+..+++..|.++..|+
T Consensus 95 ~~t~G~~~al~~~~~~l~~--~G-d~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 147 (391)
T 3bwn_A 95 VVGTGSTQLCQAAVHALSS--LA-RSQPVSVVAAAPFYSTYVEETTYVRSGMYKWE 147 (391)
T ss_dssp EEEEHHHHHHHHHHHHHHH--TS-SSSSEEEEECSSCCTHHHHHHHTTCBTTEEEE
T ss_pred EEeCChHHHHHHHHHHhcC--CC-CCCcceEEEcCCCchhHHHHHHHcCCeEEEec
Confidence 4456778899998888765 55 4 799999999999999999998887665
No 289
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=62.66 E-value=4.8 Score=40.55 Aligned_cols=65 Identities=14% Similarity=0.087 Sum_probs=47.6
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-......+|.+.+.+.+
T Consensus 96 ~~g~~~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 160 (388)
T 1j32_A 96 TNGGKQSIFNLMLAMIE--PG-DEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI 160 (388)
T ss_dssp ESHHHHHHHHHHHHHCC--TT-CEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHC
T ss_pred cCCHHHHHHHHHHHhcC--CC-CEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhc
Confidence 45679999998887733 55 6899999999999999999999888776542222346666555443
No 290
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=62.62 E-value=5.8 Score=40.31 Aligned_cols=67 Identities=19% Similarity=0.121 Sum_probs=50.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+-|||.|+.++...+. .-++ .+|.+++|++..+...++..|.++..++. ++.+..+|.+.+.+.+
T Consensus 82 v~~~~Gt~a~~~~l~~~~-~~~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i 148 (399)
T 2oga_A 82 VGVNSGMDALQLALRGLG-IGPG-DEVIVPSHTYIASWLAVSATGATPVPVEP-HEDHPTLDPLLVEKAI 148 (399)
T ss_dssp EEESCHHHHHHHHHHHTT-CCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECB-CSSSSSBCHHHHHHHC
T ss_pred EEecCHHHHHHHHHHHhC-CCCc-CEEEECCCccHHHHHHHHHCCCEEEEEec-CCCCCCcCHHHHHHhc
Confidence 446689999998877661 1144 68999999999999999999998887765 3445678888776654
No 291
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=62.15 E-value=5.3 Score=40.28 Aligned_cols=65 Identities=17% Similarity=0.177 Sum_probs=49.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|||.|+.++..-+. .-++ .+|.+++|+|..+...++..|.++..++. |+.+..+|.+.+.+.+
T Consensus 59 ~~sGt~al~~~l~~l~-~~~g-d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~i 123 (388)
T 1b9h_A 59 VTNGTHALELALQVMG-VGPG-TEVIVPAFTFISSSQAAQRLGAVTVPVDV-DAATYNLDPEAVAAAV 123 (388)
T ss_dssp ESCHHHHHHHHHHHTT-CCTT-CEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCCBCHHHHHHHC
T ss_pred eCCHHHHHHHHHHHcC-CCCc-CEEEECCCccHHHHHHHHHcCCEEEEEec-CCCcCCCCHHHHHHhc
Confidence 4588999998887662 1144 68999999999999999999998877764 4445678887766554
No 292
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=61.61 E-value=3.6 Score=41.25 Aligned_cols=66 Identities=17% Similarity=0.094 Sum_probs=48.9
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
=+=|||.|+.++..-+.+ ++ .+|.+++|+|..+...++..|.++..++.-....-.+|.+.+.+.+
T Consensus 86 ~~~g~~~a~~~~~~~l~~--~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 151 (375)
T 3op7_A 86 QTNGATGANLLVLYSLIE--PG-DHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI 151 (375)
T ss_dssp EESHHHHHHHHHHHHHCC--TT-CEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHC
T ss_pred EcCChHHHHHHHHHHhcC--CC-CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhh
Confidence 355789999988876643 55 6799999999999999999999988887643333346766554433
No 293
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=61.42 E-value=3.6 Score=42.02 Aligned_cols=67 Identities=10% Similarity=0.158 Sum_probs=49.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCC-CCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN-KTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~-~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-.. ....+|.+.+.+.+
T Consensus 90 ~~t~g~~~al~~~~~~~~~--~g-d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l 157 (411)
T 2o0r_A 90 LVTVGATEAIAAAVLGLVE--PG-SEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAV 157 (411)
T ss_dssp EEEEHHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHC
T ss_pred EEeCCHHHHHHHHHHHhcC--CC-CEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhh
Confidence 4566789999998887633 55 68999999999999999999999888775322 12347777665544
No 294
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=61.19 E-value=5.5 Score=39.86 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=48.7
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccC-CCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD-NKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~-~~~~~~d~~~~~~~~ 73 (583)
|=|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-. ..+-.+|.+.+.+.+
T Consensus 88 ~~g~~~a~~~~~~~l~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l 153 (383)
T 3kax_A 88 SAGIVPALSTSIQAFTK--EN-ESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF 153 (383)
T ss_dssp ESCHHHHHHHHHHHHCC--TT-CEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCC--CC-CEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHh
Confidence 55789999988887743 55 6899999999999999999999988877642 222336776665544
No 295
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=61.05 E-value=8.6 Score=38.93 Aligned_cols=67 Identities=13% Similarity=-0.015 Sum_probs=51.6
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-+-|||.|+.++...+. .-++ .+|.+++|+|..+...++..|.++..++.- .+..+|.+.+.+.++
T Consensus 51 ~~~~ggt~al~~~~~~l~-~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~ 117 (394)
T 1o69_A 51 LALNSATAALHLALRVAG-VKQD-DIVLASSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIK 117 (394)
T ss_dssp EEESCHHHHHHHHHHHTT-CCTT-CEEEEESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHcC-CCCC-CEEEECCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHh
Confidence 446789999999888762 1144 689999999999999999999988877653 455688887766654
No 296
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=60.95 E-value=10 Score=38.81 Aligned_cols=68 Identities=13% Similarity=0.133 Sum_probs=46.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhh-hcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC-TDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~-~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-+-|||.|+.++...+.+ ++ .+|.+++|+|..+...+ +..|.++..++.-....-++|.+.+.+.++
T Consensus 112 ~~~~G~~~ai~~~~~~~~~--~g-d~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 180 (428)
T 1iay_A 112 VMAGGATGANETIIFCLAD--PG-DAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYE 180 (428)
T ss_dssp EEEEHHHHHHHHHHHHHCC--TT-CEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHH
T ss_pred EEccChHHHHHHHHHHhCC--CC-CeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHH
Confidence 3455678899888877654 55 68999999999987644 577888888876322223567666555443
No 297
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=60.63 E-value=7.7 Score=38.85 Aligned_cols=64 Identities=13% Similarity=0.078 Sum_probs=48.0
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++. +..-.+|.+.+.+.+
T Consensus 92 ~~~g~~~a~~~~~~~l~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l 155 (376)
T 2dou_A 92 ALIGSQEGLAHLLLALTE--PE-DLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGV 155 (376)
T ss_dssp EESSHHHHHHHHHHHHCC--TT-CEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHH
T ss_pred EcCCcHHHHHHHHHHhcC--CC-CEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhh
Confidence 345678899888877643 45 67999999999999999999999888877 222336777665544
No 298
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=60.44 E-value=6.4 Score=40.36 Aligned_cols=64 Identities=14% Similarity=0.079 Sum_probs=45.7
Q ss_pred cccchhHH--HHHHHHHHhhcC----------CCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSL--RVGTAFLERFYP----------GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~--~~~~~~~~~~~~----------~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
|-++|.|| .+....|.+..+ + .+|.+++|+|..+..+++..|.++..++.-+. ++|++.+.+.+
T Consensus 101 t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~g-d~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l 176 (427)
T 3ppl_A 101 GDASSLNIMFDVISWSYIFGNNDSVQPWSKEET-VKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELV 176 (427)
T ss_dssp CSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSC-CEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHT
T ss_pred eCCcHHHHHHHHHHHHHhccCCcccccccCCCC-CEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHH
Confidence 44677788 355554433223 4 68999999999999999999999988887432 58877654443
No 299
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=60.31 E-value=6.6 Score=39.76 Aligned_cols=66 Identities=14% Similarity=-0.095 Sum_probs=47.1
Q ss_pred cccchhHHHHHHHHHHhhc-CCCeEEecCCCCcCchhhhhhc----CCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFY-PGVKTVYFPTPTWNGHVRFCTD----SRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~-~~~~~~~~~~p~w~n~~~~~~~----~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
|-|||.|+.++...+.+.. ++ ..|.+++|+|..+...+.. .|.++..++. ++.+..+|.+.+.+.+
T Consensus 92 ~~g~t~al~~~~~~l~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~l 162 (406)
T 3cai_A 92 GADRAVLLSLLAEASSSRAGLG-YEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEV-DIETGELPTWQWESLI 162 (406)
T ss_dssp ESCHHHHHHHHHHHTGGGGBTT-CEEEEETTSCGGGTHHHHHHHHHHBCEEEEECC-CTTTCCCCGGGHHHHC
T ss_pred eCChHHHHHHHHHHHhhccCCC-CEEEEcCCccHHHHHHHHHHHHhcCCeEEEEec-CcccCCcCHHHHHHHh
Confidence 4577999998887664322 44 6799999999977665554 5888887774 3455668888776655
No 300
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=60.11 E-value=7.4 Score=39.29 Aligned_cols=68 Identities=12% Similarity=0.147 Sum_probs=49.0
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCC-CcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~-~~~~d~~~~~~~~~ 74 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+.. +-.+|.+.+.+.++
T Consensus 93 ~~t~g~~~a~~~~~~~l~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~ 161 (399)
T 1c7n_A 93 INTAGVVPAVFNAVREFTK--PG-DGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSK 161 (399)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHT
T ss_pred EEcCCHHHHHHHHHHHhcC--CC-CEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhc
Confidence 3456779999998887743 45 679999999999999999999988777653221 12367666555443
No 301
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=59.55 E-value=4.6 Score=41.20 Aligned_cols=67 Identities=13% Similarity=0.166 Sum_probs=48.9
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+..+++..|.++..++.-......+|.+.+.+.+
T Consensus 108 ~~~~g~~~al~~~~~~l~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 174 (416)
T 1bw0_A 108 VLCSGGSHGILMAITAICD--AG-DYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLK 174 (416)
T ss_dssp EEESHHHHHHHHHHHHHCC--TT-CEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHC
T ss_pred EEeCChHHHHHHHHHHhCC--CC-CEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHh
Confidence 3456788899988877743 55 6899999999999999999999988777532222346766655443
No 302
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=59.08 E-value=4.1 Score=42.26 Aligned_cols=51 Identities=10% Similarity=-0.090 Sum_probs=41.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 57 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~ 57 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+..+++..|.++..++.-
T Consensus 122 ~~t~G~~~al~~~~~~l~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 172 (447)
T 3b46_A 122 TVTTGANEGILSCLMGLLN--AG-DEVIVFEPFFDQYIPNIELCGGKVVYVPIN 172 (447)
T ss_dssp EEESHHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHHHHTTCEEEEEEEE
T ss_pred EEeCCHHHHHHHHHHHHcC--CC-CEEEEeCCCchhHHHHHHHcCCEEEEEeCC
Confidence 4466779999998887633 55 689999999999999999999988877754
No 303
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=58.90 E-value=4.2 Score=41.41 Aligned_cols=67 Identities=15% Similarity=0.167 Sum_probs=48.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+.....+|.+.+.+.+
T Consensus 105 ~~t~g~~~al~~~~~~l~~--~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 171 (406)
T 1xi9_A 105 RVTAAVTEALQLIFGALLD--PG-DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKI 171 (406)
T ss_dssp EEESHHHHHHHHHHHHHCC--TT-CEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHC
T ss_pred EEcCChHHHHHHHHHHhCC--CC-CEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhh
Confidence 3456789999998887733 55 6899999999999999999999888777632222346766554443
No 304
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=58.89 E-value=5.5 Score=40.71 Aligned_cols=66 Identities=21% Similarity=0.173 Sum_probs=50.1
Q ss_pred eecccchhHHHHHHHHH-HhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFL-ERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~-~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+-|||.|+.++...+ .+ ++ .+|.+++|+|..+...++..|.++..++. ++.+..+|.+.+.+.+
T Consensus 61 i~~~~gt~al~~~~~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i 127 (418)
T 2c81_A 61 VPTTSGSTALMLALEALGIG--EG-DEVIVPSLTWIATATAVLNVNALPVFVDV-EADTYCIDPQLIKSAI 127 (418)
T ss_dssp EEESCHHHHHHHHHHHTTCC--TT-CEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHGGGC
T ss_pred EEeCCHHHHHHHHHHHcCCC--Cc-CEEEECCCccHhHHHHHHHcCCEEEEEec-CCCCCCcCHHHHHHhh
Confidence 34668999999888766 22 45 67999999999999999999999887765 4445677877665443
No 305
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=58.86 E-value=9.7 Score=38.05 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=48.3
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++. + ...++|.+.+.+.++
T Consensus 97 ~~~G~~~al~~~~~~l~~--~g-d~Vl~~~~~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~ 161 (369)
T 3cq5_A 97 AANGSNEILQQLLQAFGG--PG-RTALGFQPSYSMHPILAKGTHTEFIAVSR-G-ADFRIDMDVALEEIR 161 (369)
T ss_dssp EESHHHHHHHHHHHHHCS--TT-CEEEEEESSCTHHHHHHHHTTCEEEEEEC-C-TTSSCCHHHHHHHHH
T ss_pred ECCChHHHHHHHHHHhcC--CC-CEEEEcCCChHHHHHHHHHcCCEEEEecC-C-cCCCCCHHHHHHHhh
Confidence 345678888888776643 55 68999999999999999999999888874 2 234678776655543
No 306
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=58.58 E-value=3.4 Score=42.04 Aligned_cols=64 Identities=14% Similarity=0.052 Sum_probs=47.4
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccC---------CCCcccchhhhHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD---------NKTNGLDFAGMMED 72 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~---------~~~~~~d~~~~~~~ 72 (583)
|-|||.|+.++...+.+ ++ .+|.+++|+|..+..+++..|.++..+++.. .....+|++.+.+.
T Consensus 91 ~~g~~~a~~~~~~~~~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~ 163 (410)
T 3e2y_A 91 AVGAYGSLFNSIQGLVD--PG-DEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESK 163 (410)
T ss_dssp ESHHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTT
T ss_pred eCCcHHHHHHHHHHhcC--CC-CEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhh
Confidence 45778899888877633 45 6799999999999999999999988887652 12334666655443
No 307
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=58.04 E-value=8.6 Score=38.41 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=49.9
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCc--hhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n--~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|.. +..+++..|.++..++.-+ ...+|.+.+.+.++
T Consensus 75 ~~~~g~t~a~~~~~~~l~~--~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~ 142 (386)
T 2dr1_A 75 LVPSSGTGIMEASIRNGVS--KG-GKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALR 142 (386)
T ss_dssp EESSCHHHHHHHHHHHHSC--TT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHH
T ss_pred EEeCChHHHHHHHHHHhhc--CC-CeEEEEcCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHh
Confidence 4567999999999887643 55 689999999987 7777888899888777532 34578777666554
No 308
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=57.83 E-value=12 Score=37.40 Aligned_cols=70 Identities=6% Similarity=-0.066 Sum_probs=54.3
Q ss_pred eecccchhHHHHHHHHHHhhc----------CCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFY----------PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~----------~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+.+ .+..+|.+++|++..+...++..|.++..++.-+ ...+|.+.+.+.+
T Consensus 90 ~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i 167 (397)
T 3f9t_A 90 HIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAV 167 (397)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHH
T ss_pred EEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHH
Confidence 456789999999988886631 1126899999999999999999999988887633 3567888877766
Q ss_pred Hh
Q psy14428 74 KL 75 (583)
Q Consensus 74 ~~ 75 (583)
+.
T Consensus 168 ~~ 169 (397)
T 3f9t_A 168 ED 169 (397)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 309
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=57.58 E-value=11 Score=40.33 Aligned_cols=123 Identities=15% Similarity=0.142 Sum_probs=72.7
Q ss_pred CCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCC----------CC------EEEEcCCCCh-----------------
Q psy14428 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPG----------VK------TVYFPTPTWN----------------- 269 (583)
Q Consensus 223 ~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~----------gd------~Vlv~~P~y~----------------- 269 (583)
|.+.+ ++.|.| ++.+..++....+.|..+... |. ..+...|-|+
T Consensus 80 Y~L~v-~~~i~I--~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ 156 (543)
T 3rcn_A 80 YRLEV-SDAVVI--SAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDN 156 (543)
T ss_dssp EEEEE-SSSEEE--EESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHH
T ss_pred eEEEE-CCeEEE--EECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHH
Confidence 45677 888999 877776666555555544431 21 1244567664
Q ss_pred --hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC--CCCcEEE-EeC--CCCCCCCCCCCHHHHHHHHHHHHhc
Q psy14428 270 --GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--PERSILF-LQT--SSHNPTGVDLSEDQWRQLAVVVKQR 342 (583)
Q Consensus 270 --~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--~~~~~~i-~i~--~p~NPTG~~~s~~~~~~l~~~a~~~ 342 (583)
.+...+..++.++....+.|...|.+......+.-+.- ...+.+= .-+ .-..|.|..+|++++++|++.|+++
T Consensus 157 ik~~ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~r 236 (543)
T 3rcn_A 157 VLRFIEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADR 236 (543)
T ss_dssp HHHHHHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHc
Confidence 24556677788888888866544444443332221110 0010000 000 1123558899999999999999999
Q ss_pred CeEEEE
Q psy14428 343 HLYPFF 348 (583)
Q Consensus 343 ~i~iI~ 348 (583)
+|-||=
T Consensus 237 gI~VIP 242 (543)
T 3rcn_A 237 HITVIP 242 (543)
T ss_dssp TCEEEE
T ss_pred CCEEee
Confidence 998774
No 310
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=57.49 E-value=7 Score=39.62 Aligned_cols=64 Identities=22% Similarity=0.288 Sum_probs=49.5
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.- + .++|.+.+.+.++
T Consensus 103 ~t~g~t~a~~~~~~~~~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~--~~~d~~~l~~~l~ 166 (407)
T 2zc0_A 103 ITIGGTGALDLLGRVLID--PG-DVVITENPSYINTLLAFEQLGAKIEGVPVD-N--DGMRVDLLEEKIK 166 (407)
T ss_dssp EESHHHHHHHHHHHHHCC--TT-CEEEEEESCCHHHHHHHHTTTCEEEEEEEE-T--TEECHHHHHHHHH
T ss_pred EecCHHHHHHHHHHHhcC--CC-CEEEEeCCChHHHHHHHHHcCCEEEEcccC-C--CCCCHHHHHHHHH
Confidence 455679999999887743 55 679999999999999999999988888763 3 2488777666554
No 311
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=56.90 E-value=12 Score=38.85 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=44.5
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCC-CCcCchhhh-----------hhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHVRF-----------CTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~-p~w~n~~~~-----------~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
|+-|||.|+.++..-+.+ ++ .+|.+++ |+++.+..+ ++..|.++..++.- ....+|++.+.+.
T Consensus 96 ~~~sGt~Ai~~al~all~--pG-D~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~--~~g~~D~e~l~~~ 170 (427)
T 3i16_A 96 HFVNGTHALGAALFGNLR--PG-NTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLK--EDGKPNLEEIEKV 170 (427)
T ss_dssp TCCSHHHHHHHHHHHHCC--TT-CEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCC--TTSSCCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHhC--CC-CEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCc--cCCCcCHHHHHHH
Confidence 488999999877654433 55 6788888 999988744 34456665554431 3456899888777
Q ss_pred HH
Q psy14428 73 IK 74 (583)
Q Consensus 73 ~~ 74 (583)
++
T Consensus 171 l~ 172 (427)
T 3i16_A 171 LK 172 (427)
T ss_dssp HH
T ss_pred hh
Confidence 65
No 312
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=56.83 E-value=10 Score=38.47 Aligned_cols=66 Identities=12% Similarity=0.042 Sum_probs=48.6
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+ ..-.+|.+.+.+.+
T Consensus 113 ~~t~G~~~al~~~~~~l~~--~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l 178 (404)
T 2o1b_A 113 CILYGTKNGLVAVPTCVIN--PG-DYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQI 178 (404)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHH
T ss_pred EEcCCcHHHHHHHHHHhcC--CC-CEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhh
Confidence 3455778899998887743 45 6799999999999999999999888777543 22236766665543
No 313
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=56.49 E-value=7.4 Score=39.26 Aligned_cols=70 Identities=20% Similarity=0.123 Sum_probs=51.8
Q ss_pred eecccchhHHHHHHHHHHh----hcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLER----FYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~----~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-+-|||-|+.++...+.. ...+...|.+++|++..+...++..|.++..++. ++.+..+|.+.+.+.++
T Consensus 53 i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~ 126 (390)
T 3b8x_A 53 VMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDI-DINTLNIDIESLKEAVT 126 (390)
T ss_dssp EEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHHHHCC
T ss_pred EEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec-CccccCcCHHHHHHHhC
Confidence 4567899999988876621 1222268999999999999999989998877765 44467788887766553
No 314
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=55.85 E-value=4.9 Score=41.02 Aligned_cols=50 Identities=14% Similarity=0.040 Sum_probs=41.0
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccC
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD 58 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~ 58 (583)
|=|||.|+.++...+.+ ++ .+|.+++|+|..+..+++..|.++..++...
T Consensus 97 ~~g~~~a~~~~~~~~~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 146 (422)
T 3fvs_A 97 TVGGYGALFTAFQALVD--EG-DEVIIIEPFFDCYEPMTMMAGGRPVFVSLKP 146 (422)
T ss_dssp ESHHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHHHHTTCEEEEEECBC
T ss_pred ECChHHHHHHHHHHHcC--CC-CEEEEcCCCchhhHHHHHHcCCEEEEEeccc
Confidence 45788899888776633 55 6799999999999999999999988887753
No 315
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=55.62 E-value=4.7 Score=40.49 Aligned_cols=67 Identities=15% Similarity=0.040 Sum_probs=50.9
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+-|||.|+.++...+. .-++ .+|.+++|++......++..|.++..++. ++.+..+|.+.+.+.+
T Consensus 55 i~~~sgt~al~~~l~~l~-~~~g-d~Vi~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~l 121 (373)
T 3frk_A 55 IGCGNGLDALHLILKGYD-IGFG-DEVIVPSNTFIATALAVSYTGAKPIFVEP-DIRTYNIDPSLIESAI 121 (373)
T ss_dssp EEESCHHHHHHHHHHHTT-CCTT-CEEEEETTSCTHHHHHHHHHSCEEEEECE-ETTTTEECGGGTGGGC
T ss_pred EEeCCHHHHHHHHHHHcC-CCCc-CEEEECCCCcHHHHHHHHHcCCEEEEEec-cccccCcCHHHHHHhc
Confidence 446689999998887661 1144 68999999999999999999998887765 4456778887765544
No 316
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=55.43 E-value=35 Score=31.30 Aligned_cols=96 Identities=11% Similarity=0.050 Sum_probs=53.9
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEe
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQ 316 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i 316 (583)
..|++++|=.. +...+...|..|++..-.-.......+..+.++..+.. |-. |.+.+.+.+++......+++.
T Consensus 6 VTGas~gIG~~--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 6 ITGASSGLGAE--LAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRAR-DLA----SHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp EESTTSHHHHH--HHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEEC-CTT----CHHHHHHHHHSCSSCCSEEEE
T ss_pred EecCCchHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEee-cCC----CHHHHHHHHHHHhhcCCEEEE
Confidence 34555565443 33344445777877766555555555555656655655 432 677787777765443345544
Q ss_pred CCCCCCCCC--CCCHHHHHHHHHHH
Q psy14428 317 TSSHNPTGV--DLSEDQWRQLAVVV 339 (583)
Q Consensus 317 ~~p~NPTG~--~~s~~~~~~l~~~a 339 (583)
+-...+.+. ..+.+++++..+.-
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N 103 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENN 103 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHHH
Confidence 333233332 45778887776643
No 317
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=55.23 E-value=8.9 Score=39.30 Aligned_cols=63 Identities=14% Similarity=0.192 Sum_probs=47.1
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
-|-|||.||.++...|.+ ++ .+|.+++|+|..+...++..|.++..++. +. .++|.+.+-+.+
T Consensus 113 ~t~G~~~al~~~~~~l~~--~g-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~--~~~d~~~l~~~l 175 (425)
T 2r2n_A 113 VTSGSQQGLCKVFEMIIN--PG-DNVLLDEPAYSGTLQSLHPLGCNIINVAS-DE--SGIVPDSLRDIL 175 (425)
T ss_dssp EESSHHHHHHHHHHHHCC--TT-CEEEEESSCCHHHHHHHGGGTCEEEEECE-ET--TEECHHHHHHHH
T ss_pred EeCcHHHHHHHHHHHhCC--CC-CEEEEeCCCcHHHHHHHHHcCCEEEEeCc-CC--CCCCHHHHHHHH
Confidence 345668888888877643 55 68999999999999999999999888876 32 257766554433
No 318
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=53.96 E-value=6.6 Score=41.37 Aligned_cols=69 Identities=19% Similarity=0.179 Sum_probs=46.3
Q ss_pred ceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhh--------hcCCCceeeeec-cCCCCcccchhhhHHHH
Q psy14428 3 IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC--------TDSRLNVGAYRY-FDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~--------~~~~~~~~~y~~-~~~~~~~~d~~~~~~~~ 73 (583)
.||.-|||+|+.++..-|-+ |+ .+|.+++|+++.|.... +..|..+...+| .|+.+..+|++.+-+.+
T Consensus 113 ~V~~~sGs~an~~~~~all~--pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i 189 (483)
T 1rv3_A 113 NVQPYSGSPANFAVYTALVE--PH-GRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENA 189 (483)
T ss_dssp ECCCSSHHHHHHHHHHHHTC--TT-CEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHHhcC--CC-CEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHH
Confidence 38999999888775444422 55 68999999998886432 222322444444 26677889999887776
Q ss_pred H
Q psy14428 74 K 74 (583)
Q Consensus 74 ~ 74 (583)
+
T Consensus 190 ~ 190 (483)
T 1rv3_A 190 R 190 (483)
T ss_dssp H
T ss_pred h
Confidence 5
No 319
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=53.54 E-value=4.4 Score=41.39 Aligned_cols=51 Identities=16% Similarity=0.140 Sum_probs=41.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 57 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~ 57 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-
T Consensus 103 ~~t~g~~~a~~~~~~~~~~--~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T 2x5d_A 103 IVTIGSKEGLAHLMLATLD--HG-DTILVPNPSYPIHIYGAVIAGAQVRSVPLV 153 (412)
T ss_dssp EEESCHHHHHHHHHHHHCC--TT-CEEEEEESCCHHHHHHHHHHTCEEEEEECS
T ss_pred EEcCChHHHHHHHHHHhCC--CC-CEEEEcCCCchhHHHHHHHcCCEEEEeecC
Confidence 4466889999999887633 45 679999999999999999999988877754
No 320
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=53.52 E-value=6.4 Score=39.52 Aligned_cols=65 Identities=17% Similarity=0.068 Sum_probs=48.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccC-CCCcccchhhhHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFD-NKTNGLDFAGMME 71 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~-~~~~~~d~~~~~~ 71 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-. +.+..+|.+.+.+
T Consensus 82 ~~~~g~~~a~~~~~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~ 147 (381)
T 1v2d_A 82 VVTSGATEALYVLLQSLVG--PG-DEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEK 147 (381)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHT
T ss_pred EEcCChHHHHHHHHHHhCC--CC-CEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHH
Confidence 3466889999999887733 55 6899999999999999999999888877531 2235677665544
No 321
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=53.11 E-value=5.6 Score=40.79 Aligned_cols=67 Identities=10% Similarity=0.057 Sum_probs=49.8
Q ss_pred ecccchhHHHHHHHHHHhhcCCCe--EEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVK--TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~--~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
=|=|||.|+.++...+.++-++ . +|.+++|+|..+...++..|.++..++.- +.+..+|.+.+.+.+
T Consensus 110 ~t~g~t~al~~~~~~l~~~~~g-d~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l 178 (437)
T 3g0t_A 110 PTVGSMQGCFVSFLVANRTHKN-REYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYL 178 (437)
T ss_dssp EESHHHHHHHHHHHHHTTSCTT-CSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHhcCCCC-CccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHH
Confidence 3557899999998877511255 5 79999999999999999999999888875 333346766555544
No 322
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=52.74 E-value=10 Score=38.78 Aligned_cols=67 Identities=12% Similarity=-0.045 Sum_probs=48.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCC--------CcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK--------TNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~--------~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-... ..++|.+.+.+.+
T Consensus 105 ~~~~g~~~a~~~~~~~~~~--~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 179 (429)
T 1yiz_A 105 LVTVGAYEALYATIQGHVD--EG-DEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALF 179 (429)
T ss_dssp EEESHHHHHHHHHHHHHCC--TT-CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHC
T ss_pred EEecChHHHHHHHHHHhcC--CC-CEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHh
Confidence 3455778899988887643 55 679999999999999999999988877764321 2356766555443
No 323
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=52.59 E-value=10 Score=38.27 Aligned_cols=50 Identities=12% Similarity=-0.105 Sum_probs=41.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~ 56 (583)
+-|-|||.|+.++...+.+ ++ ..|.+++|+|+.+...++..|.++..++.
T Consensus 107 ~~~~ggt~a~~~~~~~~~~--~g-d~V~~~~p~~~~~~~~~~~~g~~~~~v~~ 156 (398)
T 3a2b_A 107 ILFSTGFQSNLGPLSCLMG--RN-DYILLDERDHASIIDGSRLSFSKVIKYGH 156 (398)
T ss_dssp EEESSHHHHHHHHHHHSSC--TT-CEEEEETTCCHHHHHHHHHSSSEEEEECT
T ss_pred EEECCHHHHHHHHHHHHhC--CC-CEEEECCccCHHHHHHHHHcCCceEEeCC
Confidence 4466899999988876632 45 68999999999999999999999888775
No 324
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=52.15 E-value=6 Score=39.82 Aligned_cols=67 Identities=10% Similarity=0.151 Sum_probs=49.0
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+.....+|.+.+.+.+
T Consensus 91 ~~~~g~~~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 157 (389)
T 1gd9_A 91 MVLLGANQAFLMGLSAFLK--DG-EEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYV 157 (389)
T ss_dssp EEESSTTHHHHHHHTTTCC--TT-CEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHC
T ss_pred EEcCChHHHHHHHHHHhCC--CC-CEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhc
Confidence 4466889999988776532 45 6899999999999999999999988887642212346776665443
No 325
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=51.94 E-value=91 Score=25.77 Aligned_cols=98 Identities=12% Similarity=0.029 Sum_probs=56.5
Q ss_pred cCCchhHHHHHHHHHHHhCC--CCCEEEEcCCCChhhHHHHhhcCC---eEEEEecccCCCCCCChhhHHHHHHcCCCCc
Q psy14428 237 GISGSGSLRVGTAFLERFYP--GVKTVYFPTPTWNGHVRFCTDSRL---NVGAYRYFDNKTNGLDFAGMMEDIKAMPERS 311 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~--~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~ 311 (583)
...+.+.+.++.-+++.+.. .+..|+...|.+..+...+...|+ +++.+...++.+ -+..++++++ .+.
T Consensus 10 ~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d---~lwa~EqaLr---sg~ 83 (119)
T 1ofu_X 10 SGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAA---ALALSCEALR---LGR 83 (119)
T ss_dssp ESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHH---HHHHHHHHHH---HTC
T ss_pred cCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHH---HHHHHHHHHh---cCC
Confidence 33444555555556667763 356677667777888888888886 455554411111 2445566663 334
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeE
Q psy14428 312 ILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLY 345 (583)
Q Consensus 312 ~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~ 345 (583)
.-.|+.-+. .++..+.++|--.|++.+..
T Consensus 84 ~~aVl~wl~-----~l~~~~~RRLqlAA~~g~~~ 112 (119)
T 1ofu_X 84 SHTVVSWLE-----PLSRAARKQLSRAAQLGQAQ 112 (119)
T ss_dssp EEEEEECCS-----SCCHHHHHHHHHHHHHHTCE
T ss_pred ccEEEECCC-----cCChHHHHHHHHHHHhCCCe
Confidence 334444332 26777887777766665543
No 326
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=51.94 E-value=9.4 Score=38.08 Aligned_cols=48 Identities=13% Similarity=-0.033 Sum_probs=39.7
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeee
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYR 55 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~ 55 (583)
=|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++
T Consensus 94 ~~~g~~~a~~~~~~~~~~--~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~ 141 (370)
T 2z61_A 94 ITGGSSLGLFFALSSIID--DG-DEVLIQNPCYPCYKNFIRFLGAKPVFCD 141 (370)
T ss_dssp EESSHHHHHHHHHHHHCC--TT-CEEEEESSCCTHHHHHHHHTTCEEEEEC
T ss_pred ECCChHHHHHHHHHHhcC--CC-CEEEEeCCCchhHHHHHHHcCCEEEEeC
Confidence 355788999998887733 55 6899999999999999999999887776
No 327
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=51.65 E-value=7.8 Score=38.57 Aligned_cols=66 Identities=9% Similarity=-0.064 Sum_probs=49.5
Q ss_pred ecccchhHHHHHHHHHHh-hcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLER-FYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~-~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
=+-|||.|+.++...+.+ .-++ .+|.+++|++..+...++..|.++..++. ++.+ .+|.+.+.+.+
T Consensus 52 ~~~ggt~al~~~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-~~d~~~l~~~i 118 (375)
T 2fnu_A 52 VFNSATSALLTLYRNFSEFSADR-NEIITTPISFVATANMLLESGYTPVFAGI-KNDG-NIDELALEKLI 118 (375)
T ss_dssp EESCHHHHHHHHHHHSSCCCTTS-CEEEECSSSCTHHHHHHHHTTCEEEECCB-CTTS-SBCGGGSGGGC
T ss_pred EeCCHHHHHHHHHHHhcccCCCC-CEEEECCCccHhHHHHHHHCCCEEEEecc-CCCC-CCCHHHHHhhc
Confidence 356899999998887732 1144 68999999999999999999998877765 3333 67877775544
No 328
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=50.76 E-value=8.1 Score=40.09 Aligned_cols=65 Identities=18% Similarity=0.276 Sum_probs=45.4
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCC-CCcCchhhhh----------hcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHVRFC----------TDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~-p~w~n~~~~~----------~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+.-|||.|+.++..-+.+ ++ .+|.+++ |+++.+...+ +..|.++..++.-+ ...+|.+.+.+.+
T Consensus 88 ~~~sGt~Ai~~al~al~~--~G-d~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~--~~~~d~e~l~~~l 162 (431)
T 3ht4_A 88 QIISGTHAISTALFGILR--PG-DELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTE--GGLVDFEAVAAAI 162 (431)
T ss_dssp TSCSHHHHHHHHHHTTCC--TT-CEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCT--TSSBCHHHHHHHC
T ss_pred eeeCHHHHHHHHHHHhCC--CC-CEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCC--CCCcCHHHHHhhc
Confidence 456999999888654433 55 5677777 9999888544 45678887777633 2568888776665
Q ss_pred H
Q psy14428 74 K 74 (583)
Q Consensus 74 ~ 74 (583)
+
T Consensus 163 ~ 163 (431)
T 3ht4_A 163 H 163 (431)
T ss_dssp C
T ss_pred C
Confidence 3
No 329
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=50.59 E-value=13 Score=36.29 Aligned_cols=56 Identities=14% Similarity=-0.057 Sum_probs=41.8
Q ss_pred ccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhh
Q psy14428 7 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 7 ~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
=++|.++.+....+ ++ .+|.+++|+|..+...++..|.++..++.-+ ..++|.+.+
T Consensus 75 ~G~~~~l~~~~~~~----~g-d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l 130 (337)
T 3p1t_A 75 RGIDECFDRISAEF----SS-MRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDL 130 (337)
T ss_dssp SHHHHHHHHHHHHS----TT-SEEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHH
T ss_pred CCHHHHHHHHHHhc----CC-CeEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHH
Confidence 35566777666544 55 5899999999999999999999988887633 246776654
No 330
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=50.55 E-value=13 Score=37.01 Aligned_cols=52 Identities=10% Similarity=0.004 Sum_probs=42.7
Q ss_pred ecccchhHHHHHHHHHHhhcC--CCeEEecCCCCcCchhhhhhcCCCceeeeeccCC
Q psy14428 5 QGISGSGSLRVGTAFLERFYP--GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN 59 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~--~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~ 59 (583)
=|=|||.|+.++...+.+ + + .+|.+++|+|..+...++..|.++..++.-+.
T Consensus 87 ~t~g~~~al~~~~~~~~~--~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 140 (376)
T 3ezs_A 87 STLGSREVLFNFPSFVLF--DYQN-PTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKE 140 (376)
T ss_dssp EESSSHHHHHHHHHHHTT--TCSS-CEEEEEESCCTHHHHHHHHTTCEEEEEECCGG
T ss_pred ECcCcHHHHHHHHHHHcC--CCCC-CEEEEecCCcHhHHHHHHHcCCEEEEcccCCC
Confidence 356889999988887754 4 4 68999999999999999999999988876443
No 331
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=50.35 E-value=11 Score=38.09 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=48.3
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-+ .++|.+.+.+.++
T Consensus 96 ~~~g~~~al~~~~~~~~~--~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~---~~~d~~~l~~~l~ 159 (397)
T 2zyj_A 96 ITTGSQQALDLVGKVFLD--EG-SPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE---EGPDLDALEEVLK 159 (397)
T ss_dssp EESHHHHHHHHHHHHHCC--TT-CEEEEEESCCHHHHHHHHTTCCEEEEEEEET---TEECHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHhCC--CC-CEEEEeCCCcHHHHHHHHHcCCEEEecCcCC---CCCCHHHHHHHHh
Confidence 355678899888877643 55 6799999999999999999999888877632 2478776655554
No 332
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=49.89 E-value=49 Score=30.83 Aligned_cols=96 Identities=15% Similarity=0.114 Sum_probs=54.1
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++++|=.. +...+...|-.|++.+-.-.......+..|.++..+.. |-. |.+.+.+.+++. ..+..+
T Consensus 11 VTGas~gIG~a--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 11 VTGAAQGIGKA--IAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAA-DIS----DPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCC-CTT----CHHHHHHHHHHHHHHHSCCSE
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEc-CCC----CHHHHHHHHHHHHHHCCCCCE
Confidence 45666666443 33444445888888776655555566666777777766 432 555555544322 124445
Q ss_pred EEeCCCCCCCCC--CCCHHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTGV--DLSEDQWRQLAVVV 339 (583)
Q Consensus 314 i~i~~p~NPTG~--~~s~~~~~~l~~~a 339 (583)
++.+--..+.+. .++.++++++.+.-
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N 111 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDVN 111 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence 554433333332 45788888877643
No 333
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=49.81 E-value=10 Score=40.12 Aligned_cols=70 Identities=19% Similarity=0.163 Sum_probs=35.6
Q ss_pred cceecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhh--------hhhcCCCceeeeec-cCCCCcccchhhhHHH
Q psy14428 2 AIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR--------FCTDSRLNVGAYRY-FDNKTNGLDFAGMMED 72 (583)
Q Consensus 2 ~~~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~--------~~~~~~~~~~~y~~-~~~~~~~~d~~~~~~~ 72 (583)
+-||+.|||.|+.++..-|.+ |+ .+|.+++|..+-|.. ..+..|..+...+| .|+.+..+|++.+-+.
T Consensus 122 ~~v~~~sGt~An~~al~al~~--pG-D~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~ 198 (490)
T 2a7v_A 122 VNVQPYSGSPANLAVYTALLQ--PH-DRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALT 198 (490)
T ss_dssp EECCCSSHHHHHHHHHHHHCC--SC-EECCC-------------------------------CCBCTTTCSBCHHHHHHH
T ss_pred eEEeCCchHHHHHHHHHHHcC--CC-CEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHH
Confidence 357888999999887765533 56 689999998876531 12233433332232 3567888999988777
Q ss_pred HH
Q psy14428 73 IK 74 (583)
Q Consensus 73 ~~ 74 (583)
++
T Consensus 199 l~ 200 (490)
T 2a7v_A 199 AR 200 (490)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 334
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=49.42 E-value=10 Score=38.07 Aligned_cols=49 Identities=8% Similarity=-0.181 Sum_probs=39.6
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF 57 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~ 57 (583)
+-|||.|+.++...+.+ ++ ..|.+++|+|+.+...++..|.++..+++.
T Consensus 109 ~~sGt~a~~~~l~~~~~--~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 157 (399)
T 3tqx_A 109 YSSCFDANGGLFETLLG--PE-DAIISDELNHASIIDGIRLCKAQRYRYKNN 157 (399)
T ss_dssp ESCHHHHHHTTHHHHCC--TT-CEEEEETTCCHHHHHHHHSCCSEEEEECTT
T ss_pred ECchHHHHHHHHHHhcC--CC-CEEEECCcccHHHHHHHHHcCCceeEeCCC
Confidence 44788888876655532 44 689999999999999999999999888874
No 335
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=49.25 E-value=12 Score=38.39 Aligned_cols=65 Identities=9% Similarity=0.107 Sum_probs=49.1
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHHh
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKL 75 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~~ 75 (583)
-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.- +. ++|.+.+.+.++.
T Consensus 114 ~t~G~~~al~~~~~~l~~--~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~--~~d~~~l~~~l~~ 178 (425)
T 1vp4_A 114 FTVGSQQALDLIGKLFLD--DE-SYCVLDDPAYLGAINAFRQYLANFVVVPLE-DD--GMDLNVLERKLSE 178 (425)
T ss_dssp EEEHHHHHHHHHHHHHCC--TT-CEEEEEESCCHHHHHHHHTTTCEEEEEEEE-TT--EECHHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHhCC--CC-CEEEEeCCCcHHHHHHHHHcCCEEEEeccC-CC--CCCHHHHHHHHHh
Confidence 355678899888876643 45 689999999999999999999988887763 22 4887776665543
No 336
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=48.57 E-value=8.8 Score=38.24 Aligned_cols=61 Identities=13% Similarity=0.201 Sum_probs=43.3
Q ss_pred ccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHH
Q psy14428 7 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 71 (583)
Q Consensus 7 ~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~ 71 (583)
=|||.|+.++...+.+ ++..+|.+++|+|..+...++..|.++..++.-+ ..++|.+.+.+
T Consensus 82 ~G~~~ai~~~~~~~~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~ 142 (356)
T 1fg7_A 82 RGADEGIELLIRAFCE--PGKDAILYCPPTYGMYSVSAETIGVECRTVPTLD--NWQLDLQGISD 142 (356)
T ss_dssp SHHHHHHHHHHHHHCC--TTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCT--TSCCCHHHHHT
T ss_pred CCHHHHHHHHHHHHhC--CCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCC--CCCCCHHHHHH
Confidence 3557788777765532 3314799999999999999999999888776532 23567665543
No 337
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=47.48 E-value=91 Score=29.51 Aligned_cols=101 Identities=9% Similarity=0.073 Sum_probs=58.1
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH---HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV---RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
.++.+ ..|++.+|=.. +...|...|..|++.+-.-.... ..++..|.++..+.. |-. |.+.+++.+++
T Consensus 9 gKval--VTGas~GIG~a--ia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~-Dv~----~~~~v~~~~~~ 79 (255)
T 4g81_D 9 GKTAL--VTGSARGLGFA--YAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF-DVT----DELAIEAAFSK 79 (255)
T ss_dssp TCEEE--ETTCSSHHHHH--HHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCC-CTT----CHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEe-eCC----CHHHHHHHHHH
Confidence 45555 56777777554 34445556889988765433332 234556788887776 432 44555444433
Q ss_pred ---CCCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHH
Q psy14428 307 ---MPERSILFLQTSSHNPTGV--DLSEDQWRQLAVVV 339 (583)
Q Consensus 307 ---~~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~a 339 (583)
.-.+..+++.|---++.+. .++.++|+++++.-
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vN 117 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTN 117 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 2334555554433333332 46889999988754
No 338
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=47.11 E-value=16 Score=36.54 Aligned_cols=65 Identities=9% Similarity=0.021 Sum_probs=47.0
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchh--hhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV--RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~--~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+. .+.+..|.++..++. +. ...+|.+.+.+.+
T Consensus 73 ~~~~g~t~al~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l 139 (396)
T 2ch1_A 73 CVSGSAHAGMEAMLSNLLE--EG-DRVLIAVNGIWAERAVEMSERYGADVRTIEG-PP-DRPFSLETLARAI 139 (396)
T ss_dssp EESSCHHHHHHHHHHHHCC--TT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEEC-CT-TSCCCHHHHHHHH
T ss_pred EECCcHHHHHHHHHHHhcC--CC-CeEEEEcCCcccHHHHHHHHHcCCceEEecC-CC-CCCCCHHHHHHHH
Confidence 4567899999998887733 55 68999999999985 367788988877765 22 3457776655444
No 339
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=47.11 E-value=13 Score=38.64 Aligned_cols=64 Identities=16% Similarity=0.172 Sum_probs=48.8
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
=|-|||.||.++...+.+ ++ .+|.+++|+|..+...++..|.++..++. |+ .++|.+.+-+.++
T Consensus 145 ~t~G~~~al~~~~~~l~~--~G-d~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~--~g~d~~~L~~~l~ 208 (448)
T 3aow_A 145 ITSGSQQALDLIGRVFLN--PG-DIVVVEAPTYLAALQAFNFYEPQYIQIPL-DD--EGMKVEILEEKLK 208 (448)
T ss_dssp EESSHHHHHHHHHHHHCC--TT-CEEEEEESCCHHHHHHHHTTCCEEEEEEE-ET--TEECHHHHHHHHH
T ss_pred EeCcHHHHHHHHHHHHcC--CC-CEEEEeCCChHHHHHHHHHcCCEEEEecc-CC--CCCCHHHHHHHHh
Confidence 356788999988887743 55 68999999999999999999998887776 32 2577776655544
No 340
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=47.06 E-value=15 Score=37.74 Aligned_cols=65 Identities=15% Similarity=0.231 Sum_probs=44.0
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCC-CCcCchhhh----------hhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPT-PTWNGHVRF----------CTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~-p~w~n~~~~----------~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
|+-|||.|+.++..-+.+ ++ .+|.+++ |+++....+ ++..|.++...+. + ....+|.+.+.+.+
T Consensus 82 ~~~sGt~Ai~~al~all~--~G-D~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~-~-~~g~~d~e~l~~ai 156 (409)
T 3jzl_A 82 QIISGTHAISTVLFGILR--PD-DELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPL-L-ENGDVDFPRIAKKM 156 (409)
T ss_dssp TSCSHHHHHHHHHHHHCC--TT-CEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCC-C-TTSCCCHHHHHHHC
T ss_pred CCccHHHHHHHHHHHhcC--CC-CEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCC-C-CCCCcCHHHHHHhc
Confidence 478999999887665533 55 5788888 999988743 4555666554443 1 34568888877665
Q ss_pred H
Q psy14428 74 K 74 (583)
Q Consensus 74 ~ 74 (583)
+
T Consensus 157 ~ 157 (409)
T 3jzl_A 157 T 157 (409)
T ss_dssp C
T ss_pred c
Confidence 4
No 341
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=46.94 E-value=2.8e+02 Score=29.15 Aligned_cols=104 Identities=9% Similarity=0.020 Sum_probs=57.5
Q ss_pred CCCCCCeEEEecCCchhHHHHHHHHHHHhCCCCCE-EEEc-C----------------CCChhhHHHHhhcCCeEEEEec
Q psy14428 226 AFKDNRLAIVQGISGSGSLRVGTAFLERFYPGVKT-VYFP-T----------------PTWNGHVRFCTDSRLNVGAYRY 287 (583)
Q Consensus 226 ~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~-Vlv~-~----------------P~y~~~~~~~~~~G~~~~~v~~ 287 (583)
.+.++.+++ ..|++++|=.. +...+...|.. |++. . +.-......++..|.++..+.+
T Consensus 247 ~~~~~~~vL--ITGgsgGIG~~--lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~ 322 (525)
T 3qp9_A 247 WWQADGTVL--VTGAEEPAAAE--AARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTC 322 (525)
T ss_dssp SSCTTSEEE--ESSTTSHHHHH--HHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEEC
T ss_pred eecCCCEEE--EECCCCcHHHH--HHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEEC
Confidence 356677777 77888887553 33333333544 4443 2 2223334445566888888877
Q ss_pred ccCCCCCCChhhHHHHHHcCC--CCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 288 FDNKTNGLDFAGMMEDIKAMP--ERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 288 ~d~~~~g~d~~~l~~~l~~~~--~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
|-. |.+.+.+.++... .+...++.+---...+ ..++.++++++++.
T Consensus 323 -Dvt----d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~ 372 (525)
T 3qp9_A 323 -DLT----DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTA 372 (525)
T ss_dssp -CTT----SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred -CCC----CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHH
Confidence 543 7778877776542 2334444332222222 24677888777653
No 342
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=46.69 E-value=11 Score=36.83 Aligned_cols=50 Identities=10% Similarity=0.084 Sum_probs=38.2
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhh----cCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT----DSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~----~~~~~~~~y~~ 56 (583)
+.+-|||.|+.++...+.+ ++ ..|.+++|+|..+...+. ..|.++..++.
T Consensus 17 i~~~sG~~a~~~~~~~~~~--~g-~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 70 (331)
T 1pff_A 17 AATASGMGAIAASVWTFLK--AG-DHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM 70 (331)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred EEeCChHHHHHHHHHHhcC--CC-CEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC
Confidence 5577899999999886533 45 679999999998876654 47888777755
No 343
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=46.65 E-value=17 Score=36.38 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=48.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCc--hhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n--~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|.. +..+++..|.++..++.-+ ...+|.+.+.+.++
T Consensus 89 ~~t~g~t~al~~~~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~ 156 (393)
T 1vjo_A 89 AVSGTGTAAMEATIANAVE--PG-DVVLIGVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALE 156 (393)
T ss_dssp EESSCHHHHHHHHHHHHCC--TT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHH
T ss_pred EEeCchHHHHHHHHHhccC--CC-CEEEEEcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHh
Confidence 3456899999998887733 55 689999999998 7888888899888777532 34477766655443
No 344
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=46.53 E-value=43 Score=32.09 Aligned_cols=72 Identities=8% Similarity=-0.028 Sum_probs=43.4
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEe
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQ 316 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i 316 (583)
..|++++|=.. +...+...|..|++..-.-.......+..+.++..+.. |-. |.+.+.+.+++. .+..+++.
T Consensus 21 VTGas~gIG~~--~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dl~----d~~~v~~~~~~~-~~iD~lv~ 92 (291)
T 3rd5_A 21 ITGANSGLGAV--TARELARRGATVIMAVRDTRKGEAAARTMAGQVEVREL-DLQ----DLSSVRRFADGV-SGADVLIN 92 (291)
T ss_dssp EECCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEEC-CTT----CHHHHHHHHHTC-CCEEEEEE
T ss_pred EeCCCChHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEc-CCC----CHHHHHHHHHhc-CCCCEEEE
Confidence 45666666443 33444445888887765545555566666777777776 432 777787777655 34455543
No 345
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=46.52 E-value=18 Score=35.85 Aligned_cols=67 Identities=9% Similarity=0.014 Sum_probs=47.5
Q ss_pred eecccchhHHHHHHHHHHhhc--CCCeEEecCCCCcCchhhhh---hcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFY--PGVKTVYFPTPTWNGHVRFC---TDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~--~~~~~~~~~~p~w~n~~~~~---~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-|-|||.|+.++...+.+.+ ++ .+|.+++|++..+...+ +..|.++..++. | .+..+|.+.+.+.+
T Consensus 64 ~~~~g~t~a~~~~~~~l~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i 135 (382)
T 4eb5_A 64 VFTSGATEANNLAIIGYAMRNARKG-KHILVSAVEHMSVINPAKFLQKQGFEVEYIPV-G-KYGEVDVSFIDQKL 135 (382)
T ss_dssp EEESSHHHHHHHHHHHHHHHHGGGC-CEEEEETTCCHHHHHHHHHHTTTTCEEEEECB-C-TTSCBCHHHHHHHC
T ss_pred EEcCchHHHHHHHHHHHHhhccCCC-CEEEECCCcchHHHHHHHHHHhCCcEEEEecc-C-CCCccCHHHHHHHh
Confidence 446689999999999887322 45 57999999998665444 346888877775 2 24568887766554
No 346
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=45.24 E-value=17 Score=35.72 Aligned_cols=50 Identities=10% Similarity=0.096 Sum_probs=41.1
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCC
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDN 59 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~ 59 (583)
=|-|||.||.++...+. + .+|.+++|+|..+...++..|.++..++..+.
T Consensus 72 ~t~g~~~al~~~~~~l~----g-d~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~ 121 (350)
T 3fkd_A 72 VTNGPTAAFYQIAQAFR----G-SRSLIAIPSFAEYEDACRMYEHEVCFYPSNED 121 (350)
T ss_dssp EESHHHHHHHHHHHHTT----T-CEEEEEESCCHHHHHHHHHTTCEEEEEETTSC
T ss_pred EcCCHHHHHHHHHHHHC----C-CEEEEeCCCcHHHHHHHHHcCCeEEEEecCCc
Confidence 35578889998887664 4 57999999999999999999999988887443
No 347
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=45.14 E-value=10 Score=38.82 Aligned_cols=66 Identities=14% Similarity=0.106 Sum_probs=51.1
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeecc-CCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYF-DNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~-~~~~~~~d~~~~~~~~~ 74 (583)
|=|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..+++- ...+-.+|++.+-+.++
T Consensus 125 ~~g~~ea~~~a~~~~~~--~g-d~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~ 191 (421)
T 3l8a_A 125 IDGVVPAISIALQAFSE--KG-DAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDII 191 (421)
T ss_dssp ESCHHHHHHHHHHHHSC--TE-EEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhcC--CC-CEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhh
Confidence 45777899998887743 44 679999999999999999999988888764 34334578888777665
No 348
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=44.95 E-value=10 Score=38.24 Aligned_cols=67 Identities=21% Similarity=0.045 Sum_probs=43.5
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchh---hhhhcCCCceeeeecc-CCCCcccchhhhHHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV---RFCTDSRLNVGAYRYF-DNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~---~~~~~~~~~~~~y~~~-~~~~~~~d~~~~~~~~~ 74 (583)
-+-|||.|+.++...+.+ ++ .+|.+++|+|+.+. ...+..|..+...++- ++.+..+|.+.+.+.++
T Consensus 90 ~~~sGt~a~~~~~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~ 160 (407)
T 2dkj_A 90 QPHSGSQANMAVYMALME--PG-DTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLAL 160 (407)
T ss_dssp CCSSHHHHHHHHHHHHCC--TT-CEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHH
T ss_pred EecchHHHHHHHHHHhcC--CC-CEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHh
Confidence 345888888888877632 45 68999999998883 4445555544444332 44456788777665554
No 349
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=44.78 E-value=56 Score=35.05 Aligned_cols=110 Identities=10% Similarity=-0.002 Sum_probs=65.6
Q ss_pred CCCCCC-C----CeEEEecCCchhHHHHHHHHHHHhCCCC----------CEEEEcCCCCh-------------------
Q psy14428 224 FPAFKD-N----RLAIVQGISGSGSLRVGTAFLERFYPGV----------KTVYFPTPTWN------------------- 269 (583)
Q Consensus 224 g~~~~~-~----~I~i~~t~G~~~al~l~~~~l~~~~~~g----------d~Vlv~~P~y~------------------- 269 (583)
.+.+++ + .|.| ++++..++....+.|..+...+ ...+...|.|+
T Consensus 130 ~L~V~~~~~~~~~i~I--~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik 207 (572)
T 3ozo_A 130 GLRVSPSGADRVNATI--TANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIK 207 (572)
T ss_dssp EEEEEEETTTEEEEEE--EESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHH
T ss_pred EEEeccCCCcceEEEE--EECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHH
Confidence 355665 3 4777 7766666655555555554211 12345566664
Q ss_pred hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEE
Q psy14428 270 GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPF 347 (583)
Q Consensus 270 ~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI 347 (583)
.+...+..++.++....+.|...+.+..+...+.-+. .. -..|..+|++++++|++.|++++|-||
T Consensus 208 ~~id~mA~~KlN~lH~HltDdqgwrlei~~~P~Lt~~-Ga-----------~~~~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 208 RTIEAMAAVKLNTFHWHITDSQSFPFVTTKRPNLYKF-GA-----------LSPQKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp HHHHHHHHTTCCEEEEECCCSSCCCBCCSSSHHHHHH-HS-----------SSSSSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCceEEEEeecCcCceeccccCcchhcc-CC-----------cCCCCCcCHHHHHHHHHHHHHhCCcee
Confidence 2455566778888888885554444443333221110 00 013678999999999999999998766
No 350
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=44.55 E-value=12 Score=37.87 Aligned_cols=94 Identities=10% Similarity=0.117 Sum_probs=59.3
Q ss_pred cCCCCcCchhhhhhcCCCcee--eeeccCCCCcccchhhhHHHHHh----------hhhhcccccchhhhHHHHHHHhCC
Q psy14428 32 FPTPTWNGHVRFCTDSRLNVG--AYRYFDNKTNGLDFAGMMEDIKL----------AIVQGISGSGSLRVGTAFLERFYP 99 (583)
Q Consensus 32 ~~~p~w~n~~~~~~~~~~~~~--~y~~~~~~~~~~d~~~~~~~~~~----------a~~q~~~gtgal~~~~~~~~~~~~ 99 (583)
.++|.++.+..+.+.. -.+. ... |.+.....++...+.+.-. .-+-|.|||.|+.++...+ ..|
T Consensus 50 ~~~~~~~~~~~v~~a~-~~l~~~~~~-y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~--~~~ 125 (409)
T 2gb3_A 50 IGQPDLKTPEVFFERI-YENKPEVVY-YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVI--ANP 125 (409)
T ss_dssp SCCCCSCCCTHHHHHH-HHTCCSSCC-CCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHH--CCT
T ss_pred CCCCCCCCCHHHHHHH-HHHhcCCCC-CCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHh--CCC
Confidence 3456666655444332 1111 122 2222233456666555422 2356779999999988776 334
Q ss_pred CCcEEEeCCCCCCChHhHhhhcCCccccccc
Q psy14428 100 GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 130 (583)
Q Consensus 100 ~~~~~~i~~ptw~nh~~if~~~g~~~~~y~Y 130 (583)
+ ..|.+++|+|......++..|.++..++.
T Consensus 126 g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~ 155 (409)
T 2gb3_A 126 G-DEILVLEPFYANYNAFAKIAGVKLIPVTR 155 (409)
T ss_dssp T-CEEEEEESCCTHHHHHHHHHTCEEEEEEC
T ss_pred C-CEEEEcCCCchhHHHHHHHcCCEEEEecc
Confidence 4 78999999999998888888998887765
No 351
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=43.79 E-value=20 Score=36.06 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=47.9
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCc--hhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n--~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+=|||.|+.++...+.+ ++ .+|.+++|++.. +..+++..|.++..++. +....+|.+.+.+.++
T Consensus 70 ~~sgt~al~~~~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~ 135 (411)
T 3nnk_A 70 DGTSRAGIEAILVSAIR--PG-DKVLVPVFGRFGHLLCEIARRCRAEVHTIEV--PWGEVFTPDQVEDAVK 135 (411)
T ss_dssp ESCHHHHHHHHHHHHCC--TT-CEEEEEECSHHHHHHHHHHHHTTCEEEEEEC--CTTCCCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhcC--CC-CEEEEecCCchHHHHHHHHHHcCCeEEEEec--CCCCCCCHHHHHHHHh
Confidence 44778899988887732 55 689999999854 77778888999888886 3345678887766664
No 352
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=43.71 E-value=13 Score=38.22 Aligned_cols=68 Identities=16% Similarity=0.081 Sum_probs=50.4
Q ss_pred eecccchhHHHHHHHHHH-----h-hc-CCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLE-----R-FY-PGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~-----~-~~-~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
+-+-|||.|+.++..-+. + .. ++ ..|.+++|++..+...++..|.++..++. ++.+..+|.+.+.+.+
T Consensus 81 i~~~sGt~a~~~al~~l~~~~~~~~~~~~g-d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~i 155 (437)
T 3bb8_A 81 LTTTSGSSANLLALTALTSPKLGVRALKPG-DEVITVAAGFPTTVNPTIQNGLIPVFVDV-DIPTYNVNASLIEAAV 155 (437)
T ss_dssp EEESCHHHHHHHHHHHTTCGGGGGGSCCTT-CEEEECSSSCHHHHHHHHHTTCEEEECCE-ETTTTEECGGGHHHHC
T ss_pred EEeCCHHHHHHHHHHHhhhcccccccCCCc-CEEEECCCCcHHHHHHHHHcCCEEEEEec-cCccCCcCHHHHHHhc
Confidence 446689999998887662 1 12 44 68999999999999999989988876654 3335678888776654
No 353
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=43.43 E-value=17 Score=37.10 Aligned_cols=43 Identities=14% Similarity=0.204 Sum_probs=34.2
Q ss_pred eEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 28 KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 28 ~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
.+|.+++|+|..+..+++..|.++..++.- + .++|++.+.+.+
T Consensus 132 ~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~g~d~~~l~~~l 174 (422)
T 3d6k_A 132 VKWLCPVPGYDRHFTITEHFGFEMINVPMT-D--EGPDMGVVRELV 174 (422)
T ss_dssp CEEEEEESCCHHHHHHHHHHTCEEEEEEEE-T--TEECHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHcCCEEEecCCC-C--CCCCHHHHHHHH
Confidence 369999999999999999999998888863 2 258877665544
No 354
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=42.42 E-value=1.1e+02 Score=28.89 Aligned_cols=131 Identities=13% Similarity=0.081 Sum_probs=67.5
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++.+|=.. +...|...|-.|++.+-.-....... ..+.++..+.. |-. |.+.+++.+++. -.+..+
T Consensus 7 VTGas~GIG~a--ia~~la~~Ga~V~~~~~~~~~~~~~~-~~~~~~~~~~~-Dv~----~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 7 VTGGGHGIGKQ--ICLDFLEAGDKVCFIDIDEKRSADFA-KERPNLFYFHG-DVA----DPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp EESTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHH-TTCTTEEEEEC-CTT----SHHHHHHHHHHHHHHHSCCCE
T ss_pred EecCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHH-HhcCCEEEEEe-cCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 45666666543 33445555888887765433333333 34556666665 432 445554444322 234455
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccccC
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGLYG 391 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l~G 391 (583)
++.+-..++.+ ..++.++|+++++.--.- .+ .. .......+.+..+++|.+.|.+=..+.||
T Consensus 79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g-~~----------~~-----~~~~~~~m~~~~G~IInisS~~~~~~~~~ 142 (247)
T 3ged_A 79 LVNNACRGSKGILSSLLYEEFDYILSVGLKA-PY----------EL-----SRLCRDELIKNKGRIINIASTRAFQSEPD 142 (247)
T ss_dssp EEECCCCCCCCGGGTCCHHHHHHHHHHHTHH-HH----------HH-----HHHHHHHHHHTTCEEEEECCGGGTSCCTT
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHH-HH----------HH-----HHHHHHHHhhcCCcEEEEeecccccCCCC
Confidence 55443333333 356889999988754321 00 00 00112233345688898888765554333
No 355
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=42.32 E-value=19 Score=36.40 Aligned_cols=67 Identities=10% Similarity=0.107 Sum_probs=49.0
Q ss_pred cccchhHHHHHHHHHHhhcC-CCeEEecCCCCcCchhhhh---hcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYP-GVKTVYFPTPTWNGHVRFC---TDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~-~~~~~~~~~p~w~n~~~~~---~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
|-|||.|+.++...+.+.+. ...+|.+++|++..+...+ +..|.++..++.-+ +..+|++.+.+.++
T Consensus 91 ~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~ 161 (423)
T 3lvm_A 91 TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMR 161 (423)
T ss_dssp ESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCC
T ss_pred eCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcC
Confidence 56889999999987776432 2368999999998877666 45588887776532 56678887776654
No 356
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=40.82 E-value=11 Score=36.90 Aligned_cols=72 Identities=13% Similarity=0.113 Sum_probs=49.2
Q ss_pred ccchhhhHHHHHh---h-h---hhcccccchhhhHHHHHHHhCCCCcEEEeCCCCCCChHhHhhhcCCcccccccccCCC
Q psy14428 63 GLDFAGMMEDIKL---A-I---VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKT 135 (583)
Q Consensus 63 ~~d~~~~~~~~~~---a-~---~q~~~gtgal~~~~~~~~~~~~~~~~~~i~~ptw~nh~~if~~~g~~~~~y~Y~~~~~ 135 (583)
..++...+.+.-. + + +=|.|||.|+.++...+ + ..|.++ |+|..+...++..|.++..++. + ..
T Consensus 58 ~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~-----g-d~Vl~~-p~y~~~~~~~~~~g~~~~~v~~-~-~~ 128 (335)
T 1uu1_A 58 DEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-----D-RSVFFP-PTYSCYRIFAKAVGAKFLEVPL-T-KD 128 (335)
T ss_dssp CHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS-----S-EEEECS-SSCHHHHHHHHHHTCEEEECCC-C-TT
T ss_pred hHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh-----C-CcEEEC-CCcHHHHHHHHHcCCeEEEecc-C-CC
Confidence 4556666665433 2 2 23457777887776665 3 789999 9999999888888998887765 3 23
Q ss_pred CCccccCc
Q psy14428 136 NGLDFAGM 143 (583)
Q Consensus 136 ~~~d~~~m 143 (583)
.++|.+.+
T Consensus 129 ~~~d~~~l 136 (335)
T 1uu1_A 129 LRIPEVNV 136 (335)
T ss_dssp SCCCCCCC
T ss_pred CCCCHHHc
Confidence 45676666
No 357
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=40.70 E-value=29 Score=34.32 Aligned_cols=66 Identities=5% Similarity=-0.093 Sum_probs=46.6
Q ss_pred ecccchhHHHHHHHHHHhh--cCCCeEEecCCCCcCchhhhh---hcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERF--YPGVKTVYFPTPTWNGHVRFC---TDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~--~~~~~~~~~~~p~w~n~~~~~---~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
-+-|||.|+.++...+... -++ .+|.+++|+|..+.... +..|.++..++.- .+..+|.+.+.+.+
T Consensus 66 ~~~g~t~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i 136 (384)
T 1eg5_A 66 FTSCATESINWILKTVAETFEKRK-RTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD--SRGVVKLEELEKLV 136 (384)
T ss_dssp EESCHHHHHHHHHHHHHHHTTTTC-CEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC--TTSCBCHHHHHHHC
T ss_pred EECCHHHHHHHHHHhhhhhccCCC-CEEEECCCCchHHHHHHHHHHhcCCEEEEEccC--CCCccCHHHHHHHh
Confidence 3557899999998888621 245 68999999998765554 6778888777652 23457877776654
No 358
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=40.54 E-value=1.4e+02 Score=28.64 Aligned_cols=82 Identities=17% Similarity=0.161 Sum_probs=54.3
Q ss_pred CCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q psy14428 257 GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336 (583)
Q Consensus 257 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~ 336 (583)
++..+++..|.|..+. +.+|++.+.+.- .|.-.|..++.+|+
T Consensus 189 ~~~~~v~~H~af~Yf~---~~yGl~~~~~~~-----------------------------------~~~eps~~~l~~l~ 230 (291)
T 1pq4_A 189 PQRKFIVFHPSWAYFA---RDYNLVQIPIEV-----------------------------------EGQEPSAQELKQLI 230 (291)
T ss_dssp SCCEEEESSCCCHHHH---HHTTCEEEESCB-----------------------------------TTBCCCHHHHHHHH
T ss_pred CCCEEEEECCchHHHH---HHCCCEEeeccc-----------------------------------CCCCCCHHHHHHHH
Confidence 3788999999988665 678887654321 13345788899999
Q ss_pred HHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHH-HhcCcEEEEecCcc
Q psy14428 337 VVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFA-KEVGQLCLAQSFSK 385 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~vi~i~S~SK 385 (583)
+.++++++..|.-|... +......+. +.+..++++.+++.
T Consensus 231 ~~ik~~~v~~If~e~~~---------~~~~~~~ia~~~g~~v~~ld~l~~ 271 (291)
T 1pq4_A 231 DTAKENNLTMVFGETQF---------STKSSEAIAAEIGAGVELLDPLAA 271 (291)
T ss_dssp HHHHTTTCCEEEEETTS---------CCHHHHHHHHHHTCEEEEECTTCS
T ss_pred HHHHHcCCCEEEEeCCC---------ChHHHHHHHHHcCCeEEEEcCchh
Confidence 99999998877766531 122333433 23456777776665
No 359
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=40.35 E-value=75 Score=30.21 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=52.7
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--- 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--- 307 (583)
.+++ ..|++++|=.. +...+...|..|++.+-.-.......+..|.++..+.. |-. |.+.+.+.+++.
T Consensus 30 k~vl--VTGas~gIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 30 KVAI--VTGAGAGIGLA--VARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRV-DVS----DEQQIIAMVDACVAA 100 (277)
T ss_dssp CEEE--ETTTTSTHHHH--HHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEEC-CTT----CHHHHHHHHHHHHHH
T ss_pred CEEE--EECCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEe-cCC----CHHHHHHHHHHHHHH
Confidence 3444 45666665443 33334445888887765544555555555666666665 432 555554444321
Q ss_pred CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHH
Q psy14428 308 PERSILFLQTSSHNPTG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~a 339 (583)
..+..+++.+--..+.+ ...+.++++++.+.-
T Consensus 101 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN 134 (277)
T 3gvc_A 101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIAIN 134 (277)
T ss_dssp HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 12344555433222222 246788888877653
No 360
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=39.86 E-value=16 Score=36.57 Aligned_cols=66 Identities=12% Similarity=0.008 Sum_probs=46.9
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCC-CcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNK-TNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~-~~~~d~~~~~~~~ 73 (583)
-|-|||.|+.++...+.+ ++ .+|.+++|+|..+...++..|.++..++.-... .-.+|.+.+.+.+
T Consensus 92 ~t~g~~~al~~~~~~l~~--~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l 158 (390)
T 1d2f_A 92 YGPSVIYMVSELIRQWSE--TG-EGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVL 158 (390)
T ss_dssp EESCHHHHHHHHHHHSSC--TT-CEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHhcC--CC-CEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHh
Confidence 355778899888876643 45 689999999999999999999988877653221 1236766554444
No 361
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=39.50 E-value=32 Score=35.82 Aligned_cols=69 Identities=10% Similarity=0.187 Sum_probs=49.7
Q ss_pred ceecccchhHHHHHHHHHHhhc--CC----CeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 3 IVQGISGSGSLRVGTAFLERFY--PG----VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~--~~----~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
.+++-|||.|+.++...+..++ ++ .++|.+++|+++.+....+..|+++...+.- .+..+|.+.+.+.+
T Consensus 126 ~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i 200 (474)
T 1wyu_B 126 TLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKREL 200 (474)
T ss_dssp ECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHC
T ss_pred eecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhh
Confidence 3567788888887665544321 33 1379999999999999999999998888752 24567887776654
No 362
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=39.32 E-value=2.4e+02 Score=26.27 Aligned_cols=149 Identities=11% Similarity=-0.040 Sum_probs=83.4
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEE-E--cC-----------CCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVY-F--PT-----------PTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMME 302 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vl-v--~~-----------P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~ 302 (583)
.+||..+...+..+.. . |-.|. + .- +........++..|+....+++..++ .-..+.+.+
T Consensus 11 ~SGGkDSs~al~~l~~---~-G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~e~l~~ 84 (237)
T 3rjz_A 11 YSGGKDSNYALYWAIK---N-RFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEVEDLKR 84 (237)
T ss_dssp CCSSHHHHHHHHHHHH---T-TCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHHH
T ss_pred ecCcHHHHHHHHHHHH---c-CCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHHHHHHH
Confidence 8899888766532222 2 54442 2 11 11233456788889998888873221 224677777
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEec
Q psy14428 303 DIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQS 382 (583)
Q Consensus 303 ~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S 382 (583)
.+++. ....++ +|.+.+..++..+-+.|.+.|+..+ .+++..+ ...-+..+.+.+-..+++.-
T Consensus 85 ~l~~~--~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~-----~PLW~~d---~~~Ll~e~i~~G~~aiiv~v 147 (237)
T 3rjz_A 85 VLSGL--KIQGIV-------AGALASKYQRKRIEKVAKELGLEVY-----TPAWGRD---AKEYMRELLNLGFKIMVVGV 147 (237)
T ss_dssp HHTTS--CCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE-----CSSSSCC---HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhc--CCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE-----ccccCCC---HHHHHHHHHHCCCEEEEEEE
Confidence 77543 344555 8999999999999999999998654 5666543 23345555555445555554
Q ss_pred CcccccccCccceEEEEEcCCchhHHHHHHHHHHHH
Q psy14428 383 FSKNMGLYGERVGTFSVLTPTSDETERIMSQLKILI 418 (583)
Q Consensus 383 ~SK~~~l~GlRiG~lv~~~p~~~~~~~li~~l~~~~ 418 (583)
-+.-+. +. -+|-.+. +++++.|.+..
T Consensus 148 ~~~gL~-~~-~lG~~l~--------~~~~~~L~~l~ 173 (237)
T 3rjz_A 148 SAYGLD-ES-WLGRILD--------ESALEELITLN 173 (237)
T ss_dssp ESTTCC-GG-GTTCBCC--------HHHHHHHHHHH
T ss_pred ecCCCC-hH-HCCCccC--------HHHHHHHHHHH
Confidence 333332 22 2454443 35777776543
No 363
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=39.29 E-value=9.9 Score=37.99 Aligned_cols=64 Identities=8% Similarity=0.005 Sum_probs=43.4
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhh----hhcCCCceeeeeccCCCCcccchhhh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSRLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~----~~~~~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
+-|-|||.|+.++...+. .-++ .+|.+++|+|..+... .+..|.++..++.-...+..+|.+.+
T Consensus 80 ~~~~g~t~a~~~~~~~~~-~~~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 147 (390)
T 1elu_A 80 TITDNVTTGCDIVLWGLD-WHQG-DEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVL 147 (390)
T ss_dssp EEESSHHHHHHHHHHHSC-CCTT-CEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHH
T ss_pred EEeCChHHHHHHHHhCCC-CCCC-CEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHH
Confidence 456689999999988762 1244 6899999999998754 35568888777653223344555443
No 364
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=39.24 E-value=90 Score=29.61 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=53.8
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--- 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--- 307 (583)
.+++ ..|++++|=.. +...+...|..|++.+-.-.......+..+.++..+.. |-. |.+.+++.+++.
T Consensus 28 k~vl--VTGas~GIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 28 RVCI--VTGGGSGIGRA--TAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRV-DVS----SAKDAESMVEKTTAK 98 (277)
T ss_dssp CEEE--EETTTSHHHHH--HHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEEC-CTT----CHHHHHHHHHHHHHH
T ss_pred CEEE--EECCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEe-cCC----CHHHHHHHHHHHHHH
Confidence 3444 45666666443 33444445888887765544455555656777777766 432 555555544322
Q ss_pred CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 308 PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
..+..+++.+--..+.+ ...+.++++++.+.
T Consensus 99 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 99 WGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 12344554433222222 24678888877664
No 365
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=39.06 E-value=27 Score=34.84 Aligned_cols=66 Identities=14% Similarity=0.172 Sum_probs=45.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchh--hhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV--RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~--~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|++..+. .+.+..|.++..++. ++ ...+|.+.+.+.++
T Consensus 74 ~~~~g~t~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~ 141 (393)
T 2huf_A 74 CLSASGHGGMEATLCNLLE--DG-DVILIGHTGHWGDRSADMATRYGADVRVVKS-KV-GQSLSLDEIRDALL 141 (393)
T ss_dssp EESSCHHHHHHHHHHHHCC--TT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCHHHHHHHHH
T ss_pred EEcCcHHHHHHHHHHHHhC--CC-CEEEEECCCcchHHHHHHHHHcCCeeEEEeC-CC-CCCCCHHHHHHHHh
Confidence 4567899999999887733 55 67999999986542 234567888888775 22 34577776655543
No 366
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=38.74 E-value=70 Score=29.84 Aligned_cols=99 Identities=12% Similarity=-0.031 Sum_probs=44.4
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--- 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--- 307 (583)
.+++ ..|++++|=.. +...+...|..|++.+-.-.......+..+.++..+.. |-. |.+.+.+.++..
T Consensus 8 k~~l--VTGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 8 RVFI--VTGASSGLGAA--VTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNA-DVT----NEADATAALAFAKQE 78 (257)
T ss_dssp CEEE--EESTTSHHHHH--HHHHHHHTTCEEEEEESSCC------------CEEEEC-CTT----CHHHHHHHHHHHHHH
T ss_pred CEEE--EeCCCCHHHHH--HHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEc-cCC----CHHHHHHHHHHHHHH
Confidence 3444 45666666443 33444445888877655444444444555556666655 332 555555544321
Q ss_pred CCCcEEEEeCCCCCCCCC------CCCHHHHHHHHHH
Q psy14428 308 PERSILFLQTSSHNPTGV------DLSEDQWRQLAVV 338 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG~------~~s~~~~~~l~~~ 338 (583)
..+..+++.+--..+.+. ..+.+++++..+.
T Consensus 79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 123445544322222222 3567888777664
No 367
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=38.69 E-value=93 Score=29.42 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=57.5
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhh---HHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH---VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~---~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
+.+++ ..|++.+|=.. +...|...|..|++.+-.-... ...++..|.++..+.. |-. |.+.+++.+++
T Consensus 7 gKval--VTGas~GIG~a--iA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~-Dvt----~~~~v~~~~~~ 77 (254)
T 4fn4_A 7 NKVVI--VTGAGSGIGRA--IAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA-DVS----KKKDVEEFVRR 77 (254)
T ss_dssp TCEEE--EETTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTT----SHHHHHHHHHH
T ss_pred CCEEE--EeCCCCHHHHH--HHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEc-cCC----CHHHHHHHHHH
Confidence 45666 56777777554 3334444588888766543333 2334556888888877 432 55555554433
Q ss_pred C---CCCcEEEEeCCCC--CCCC--CCCCHHHHHHHHHHH
Q psy14428 307 M---PERSILFLQTSSH--NPTG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 307 ~---~~~~~~i~i~~p~--NPTG--~~~s~~~~~~l~~~a 339 (583)
. -.+..+++ +|-. .+.+ ..++.++|+++++.-
T Consensus 78 ~~~~~G~iDiLV-NNAGi~~~~~~~~~~~~e~~~~~~~vN 116 (254)
T 4fn4_A 78 TFETYSRIDVLC-NNAGIMDGVTPVAEVSDELWERVLAVN 116 (254)
T ss_dssp HHHHHSCCCEEE-ECCCCCCTTCCGGGCCHHHHHHHHHHH
T ss_pred HHHHcCCCCEEE-ECCcccCCCCChhhCCHHHHHHHHHHH
Confidence 2 23344444 4432 3334 357899999998864
No 368
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=38.65 E-value=1.1e+02 Score=28.79 Aligned_cols=95 Identities=8% Similarity=-0.012 Sum_probs=51.6
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC--CCCcEEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--PERSILF 314 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--~~~~~~i 314 (583)
..|++++|=.. +...+...|..|++.+-.-.......+..+.++..+.. |-. |.+.+.+.++.. ..+..++
T Consensus 35 VTGas~GIG~a--ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~-Dl~----~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 35 VSGGAGGLGEA--TVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVST-NVT----SEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-CTT----CHHHHHHHHHHHTTSSEEEEE
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEc-CCC----CHHHHHHHHHHHHHhCCCCeE
Confidence 45666666443 33444445888887765545555556666777777766 432 555555544332 2234444
Q ss_pred EeCCC-CCCCC-------CCCCHHHHHHHHHH
Q psy14428 315 LQTSS-HNPTG-------VDLSEDQWRQLAVV 338 (583)
Q Consensus 315 ~i~~p-~NPTG-------~~~s~~~~~~l~~~ 338 (583)
+.++. ..+.+ ...+.+++++..+.
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHH
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHH
Confidence 44412 22222 35677778777664
No 369
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=37.48 E-value=31 Score=34.30 Aligned_cols=50 Identities=10% Similarity=-0.030 Sum_probs=39.5
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~ 56 (583)
+-+-|||.|+.++...+.+ ++ ..|.+++|+++.+...++..|.++..+++
T Consensus 103 i~~~sGt~a~~~~~~~~~~--~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 152 (384)
T 1bs0_A 103 LLFISGFAANQAVIAAMMA--KE-DRIAADRLSHASLLEAASLSPSQLRRFAH 152 (384)
T ss_dssp EEESCHHHHHHHHHHHHCC--TT-CEEEEETTCCHHHHHHHHTSSSEEEEECT
T ss_pred EEeCCcHHHHHHHHHHhCC--CC-cEEEEcccccHHHHHHHHHcCCCEEEeCC
Confidence 3456888898887765533 44 68999999999999999999999888774
No 370
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=37.03 E-value=55 Score=30.84 Aligned_cols=97 Identities=12% Similarity=0.011 Sum_probs=47.1
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc---
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA--- 306 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~--- 306 (583)
..++| .|++++|=.. +...+...|..|++..-.-......++..++..+..++. |.+.+.+.++.
T Consensus 28 k~vlV---TGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~-------~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 28 APILI---TGASQRVGLH--CALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFS-------CETGIMAFIDLLKT 95 (260)
T ss_dssp CCEEE---SSTTSHHHHH--HHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTT-------SHHHHHHHHHHHHH
T ss_pred CEEEE---ECCCCHHHHH--HHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCC-------CHHHHHHHHHHHHH
Confidence 34555 4566665443 333344447777766544344445555567655554442 44444444432
Q ss_pred CCCCcEEEEeCCCCC-CCCCCCCHHHHHHHHHH
Q psy14428 307 MPERSILFLQTSSHN-PTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 307 ~~~~~~~i~i~~p~N-PTG~~~s~~~~~~l~~~ 338 (583)
...+..+++.+--.. +.....+.+++++..+.
T Consensus 96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~v 128 (260)
T 3gem_A 96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSV 128 (260)
T ss_dssp HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHH
T ss_pred hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHH
Confidence 223444444332211 22234566777666654
No 371
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=36.36 E-value=96 Score=33.66 Aligned_cols=26 Identities=0% Similarity=-0.167 Sum_probs=23.2
Q ss_pred CCCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 323 TGVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 323 TG~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
.|..+|++++++|++.|++++|-||-
T Consensus 138 ~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 138 FRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp TTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 36789999999999999999998774
No 372
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=36.32 E-value=1.7e+02 Score=28.81 Aligned_cols=39 Identities=21% Similarity=0.133 Sum_probs=34.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS 357 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~ 357 (583)
..||.+...+.++..++++.|+++|+-|+.|-.|++..-
T Consensus 49 ~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~wa 87 (334)
T 1fob_A 49 WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTWA 87 (334)
T ss_dssp CSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSCC
T ss_pred EECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCCC
Confidence 478889999999999999999999999999988876643
No 373
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=36.02 E-value=18 Score=35.63 Aligned_cols=58 Identities=10% Similarity=0.188 Sum_probs=43.9
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
|=|||.|+.++...+ .+|.+++|+|..+...++..|.++..++.-+. .++|.+.+.+.
T Consensus 84 ~~g~t~al~~~~~~~-------d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~l~~~ 141 (361)
T 3ftb_A 84 GNGASEIIELSISLF-------EKILIIVPSYAEYEINAKKHGVSVVFSYLDEN--MCIDYEDIISK 141 (361)
T ss_dssp ESSHHHHHHHHHTTC-------SEEEEEESCCTHHHHHHHHTTCEEEEEECCTT--SCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHc-------CcEEEecCChHHHHHHHHHcCCeEEEeecCcc--cCCCHHHHHHh
Confidence 457888998887755 47999999999999999999999888876533 35665444333
No 374
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=36.00 E-value=32 Score=34.52 Aligned_cols=66 Identities=3% Similarity=-0.010 Sum_probs=45.9
Q ss_pred ecccchhHHHHHHHHHHh--hcCCCeEEecCCCCcCch----hhhhhcCCCceeeeeccCCCCcccchhhhHHHH
Q psy14428 5 QGISGSGSLRVGTAFLER--FYPGVKTVYFPTPTWNGH----VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 73 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~--~~~~~~~~~~~~p~w~n~----~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~ 73 (583)
-|-|||.|+.++...+.+ .-++ .+|.+++|+|..+ ..+.+..|.++..++.- .+..+|.+.+.+.+
T Consensus 95 ~~~g~t~a~~~~~~~~~~~~~~~g-d~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l 166 (420)
T 1t3i_A 95 YTRNATEAINLVAYSWGMNNLKAG-DEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLL 166 (420)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTT-CEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHC
T ss_pred EcCChHHHHHHHHHHhhhcccCCC-CEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhh
Confidence 456889999999988743 2244 6899999999984 45556778887776652 33457776665544
No 375
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=35.77 E-value=15 Score=36.12 Aligned_cols=65 Identities=14% Similarity=0.039 Sum_probs=42.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCc-hh--hhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG-HV--RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n-~~--~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+=+-|||.|+.++...+.+ ++ .+|.+++|++.. +. .+.+..|.++..+ +..+..+|.+.+.+.++
T Consensus 57 ~~~~~gt~a~~~~~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v---~~~~~~~d~~~l~~~i~ 124 (347)
T 1jg8_A 57 LFVPSGTMGNQVSIMAHTQ--RG-DEVILEADSHIFWYEVGAMAVLSGVMPHPV---PGKNGAMDPDDVRKAIR 124 (347)
T ss_dssp EEESCHHHHHHHHHHHHCC--TT-CEEEEETTCHHHHSSTTHHHHHTCCEEEEE---CEETTEECHHHHHHHSC
T ss_pred EEecCcHHHHHHHHHHhcC--CC-CEEEEcCcchhhhccccchhhccCeEEEEe---cCCCCccCHHHHHHHhc
Confidence 3456888888877665533 55 689999999864 33 2566678777655 23344578776655543
No 376
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=35.64 E-value=31 Score=36.31 Aligned_cols=72 Identities=8% Similarity=0.055 Sum_probs=53.5
Q ss_pred ceecccchhHHHHHHHHHHh-hcC-----CC----eEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHH
Q psy14428 3 IVQGISGSGSLRVGTAFLER-FYP-----GV----KTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMED 72 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~-~~~-----~~----~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~ 72 (583)
++-+.|||.|+.++..-+.+ +.+ +. ..|++++|+..-+....+..|+++..++. ++.+..+|.+.+.+.
T Consensus 120 g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~ 198 (502)
T 3hbx_A 120 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKL-SEGYYVMDPQQAVDM 198 (502)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECC-BTTBCSCCHHHHHHH
T ss_pred ceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEec-CCCcCcCCHHHHHHH
Confidence 34578999999998775544 211 21 17999999988888888888999888875 445577898888887
Q ss_pred HHh
Q psy14428 73 IKL 75 (583)
Q Consensus 73 ~~~ 75 (583)
++.
T Consensus 199 i~~ 201 (502)
T 3hbx_A 199 VDE 201 (502)
T ss_dssp CCT
T ss_pred Hhh
Confidence 654
No 377
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=35.53 E-value=23 Score=36.00 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=38.5
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhh----hhhcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR----FCTDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~----~~~~~~~~~~~y~~ 56 (583)
+-+-|||.|+.++...+.+ ++ ..|.+++|+|..+.. +++..|.++..++.
T Consensus 81 i~~~~g~~ai~~~~~~l~~--~g-d~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 134 (404)
T 1e5e_A 81 VATSSGMGAIAATVLTILK--AG-DHLISDECLYGCTHALFEHALTKFGIQVDFINT 134 (404)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred EEeCChHHHHHHHHHHHhC--CC-CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC
Confidence 4466899999888875533 55 679999999998887 67778888877754
No 378
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=35.41 E-value=1.3e+02 Score=28.02 Aligned_cols=95 Identities=11% Similarity=0.083 Sum_probs=50.7
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++++|=.. +...+...|..|++.+-.-.......+..+.++..+.. |-. |.+.+.+.+++. ..+..+
T Consensus 13 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 13 ITGSARGIGRA--FAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQM-DVT----RQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp EETCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-CTT----CHHHHHHHHHHHHHHSSSCCE
T ss_pred EECCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEe-eCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 44666666443 33344445888887765555555555556666666665 432 555555444321 224455
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+-...+.+ ...+.+++++..+.
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAI 112 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 55433222222 24577888877664
No 379
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=35.39 E-value=85 Score=30.98 Aligned_cols=39 Identities=21% Similarity=0.131 Sum_probs=34.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCC
Q psy14428 319 SHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTS 357 (583)
Q Consensus 319 p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~ 357 (583)
..||.|...+.+++.++++.|+++|+-|+.|--|++..-
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~Wa 87 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWA 87 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSCC
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCcC
Confidence 477889999999999999999999999999988876653
No 380
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=35.11 E-value=23 Score=36.38 Aligned_cols=49 Identities=12% Similarity=-0.083 Sum_probs=37.9
Q ss_pred eecccchhHHHHHHHHHHh------hcCCCeEEecCCCCcCchhhhhhcCCCceee
Q psy14428 4 VQGISGSGSLRVGTAFLER------FYPGVKTVYFPTPTWNGHVRFCTDSRLNVGA 53 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~------~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~ 53 (583)
+-|-++|.||.+....|.+ .-++ .+|.+++|+|..+..+++..|.++..
T Consensus 127 v~t~G~~~al~~~~~~l~~~~~~~~~~~G-d~Vlv~~P~y~~~~~~~~~~g~~~~~ 181 (427)
T 2hox_A 127 VFGVGVTQLIHGLVISLSPNMTATPDAPE-SKVVAHAPFYPVFREQTKYFDKKGYV 181 (427)
T ss_dssp EEESHHHHHHHHHHHHHSCCTTTCTTSCC-EEEEECSSCCHHHHHHHHHSCBTTEE
T ss_pred EEeCCHHHHHHHHHHHHhhccccccCCCC-CEEEEeCCCcccHHHHHHHcCCeeee
Confidence 3455778889888887721 1245 68999999999999999999987653
No 381
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=34.86 E-value=1e+02 Score=28.78 Aligned_cols=95 Identities=17% Similarity=0.100 Sum_probs=50.4
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++++|=.. +...+...|..|++.+-.-.......+..|.++..+.. |-. |.+.+.+.++.. ..+..+
T Consensus 13 VTGas~gIG~a--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 13 VIGGTHGMGLA--TVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRS-DIA----DLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp EETCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEC-CTT----CHHHHHHHHHHHHHHHSSEEE
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEc-cCC----CHHHHHHHHHHHHHHhCCCCE
Confidence 45666666443 33444445888887765545555555555667777766 432 555554444321 234455
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+-...+.+ ..++.+++++..+.
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 54332222222 13478888777664
No 382
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=40.88 E-value=8.3 Score=38.94 Aligned_cols=95 Identities=11% Similarity=0.057 Sum_probs=60.5
Q ss_pred EecCCCCcCchhhhhhcCC--CceeeeeccCCCCcccchhhhHHHH----------HhhhhhcccccchhhhHHHHHHHh
Q psy14428 30 VYFPTPTWNGHVRFCTDSR--LNVGAYRYFDNKTNGLDFAGMMEDI----------KLAIVQGISGSGSLRVGTAFLERF 97 (583)
Q Consensus 30 ~~~~~p~w~n~~~~~~~~~--~~~~~y~~~~~~~~~~d~~~~~~~~----------~~a~~q~~~gtgal~~~~~~~~~~ 97 (583)
..+++|.++.+..+.+... +.-..+.|.++ ..++...+.+. ...-+-|.|||.|+.++...+.
T Consensus 36 l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~---~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~-- 110 (392)
T 3b1d_A 36 AWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA---SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT-- 110 (392)
Confidence 5677787777776665443 22123444443 22333333321 0123456788999998877763
Q ss_pred CCCCcEEEeCCCCCCChHhHhhhcCCccccccc
Q psy14428 98 YPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 130 (583)
Q Consensus 98 ~~~~~~~~i~~ptw~nh~~if~~~g~~~~~y~Y 130 (583)
.++ ..|.+.+|+|..+...++..|.++..+++
T Consensus 111 ~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 142 (392)
T 3b1d_A 111 KEG-EAVLINSPVYPPFARSVRLNNRKLVSNSL 142 (392)
Confidence 233 67999999999998888888888877775
No 383
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=34.58 E-value=1.1e+02 Score=28.92 Aligned_cols=95 Identities=12% Similarity=0.135 Sum_probs=50.2
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++++|=.. +...+...|..|++..-.-.......+..|.++..+.. |-. |.+.+.+.++.. ..+..+
T Consensus 32 VTGas~gIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 32 VTGATGGIGEA--IARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSA-NLS----DRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp ESSTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEEC-CTT----SHHHHHHHHHHHHHHHTSCCE
T ss_pred EeCCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEe-ecC----CHHHHHHHHHHHHHHcCCCCE
Confidence 45666666443 33444445888877765555555566666777777766 432 555555544321 123445
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+--..+.+ ...+.+++++..+.
T Consensus 105 lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (266)
T 3grp_A 105 LVNNAGITRDGLFVRMQDQDWDDVLAV 131 (266)
T ss_dssp EEECCCCC-----CCCHHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 54332222222 23566777776654
No 384
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=34.04 E-value=30 Score=35.91 Aligned_cols=29 Identities=17% Similarity=0.289 Sum_probs=25.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
++|.|..+|++++++|++.|++++|-||=
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 45778899999999999999999998773
No 385
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=33.95 E-value=1.9e+02 Score=27.20 Aligned_cols=99 Identities=10% Similarity=0.120 Sum_probs=52.2
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH---HhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
.+++ ..|++++|=.. +...+...|..|++..-.-...... ++..|.++..+.. |-. |.+.+.+.+++.
T Consensus 27 k~~l--VTGas~gIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~ 97 (271)
T 4ibo_A 27 RTAL--VTGSSRGLGRA--MAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAF-DVT----SESEIIEAFARL 97 (271)
T ss_dssp CEEE--ETTCSSHHHHH--HHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCC-CTT----CHHHHHHHHHHH
T ss_pred CEEE--EeCCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEc-CCC----CHHHHHHHHHHH
Confidence 4444 55666666443 3344445588888876554433333 3344667776666 432 555555544322
Q ss_pred ---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 308 ---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 308 ---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
..+..+++.+---.+.+ ..++.+++++..+.
T Consensus 98 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 23444555432222222 23578888887764
No 386
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=33.14 E-value=33 Score=34.56 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=38.0
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhh----hcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~----~~~~~~~~~y~~ 56 (583)
+-+-|||.|+.++...+.+ ++ .+|.+++|+|..+...+ +..|.++..++.
T Consensus 84 i~~~sG~~a~~~~l~~~~~--~g-d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 137 (398)
T 1gc0_A 84 LALASGMGAITSTLWTLLR--PG-DEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM 137 (398)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT
T ss_pred EEECCHHHHHHHHHHHHhc--CC-CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC
Confidence 5577999999998887633 45 68999999999887765 556777766653
No 387
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=33.03 E-value=1.2e+02 Score=28.58 Aligned_cols=95 Identities=13% Similarity=0.024 Sum_probs=51.4
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++++|=.. +...+...|..|++..-.-.......+..+.++..+.. |-. |.+.+.+.+++. ..+..+
T Consensus 10 VTGas~gIG~~--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 10 VTGASSGFGRA--IAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL-DVT----DGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp ETTTTSHHHHH--HHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEEC-CTT----CHHHHHHHHHHHHHHHSCCSE
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEe-eCC----CHHHHHHHHHHHHHhCCCCCE
Confidence 45666666443 33444445888887766655566666666666666665 432 555555444321 123444
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+-...+.+ ...+.++++++.+.
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (281)
T 3m1a_A 83 LVNNAGRTQVGAFEETTERELRDLFEL 109 (281)
T ss_dssp EEECCCCEEECCTTTCCHHHHHHHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 54332222222 25677888777664
No 388
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=32.59 E-value=30 Score=36.07 Aligned_cols=71 Identities=14% Similarity=0.125 Sum_probs=53.2
Q ss_pred ceecccchhHHHHHHHHHHhhc---CC--CeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 3 IVQGISGSGSLRVGTAFLERFY---PG--VKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 3 ~~q~~~~tg~~~~~~~~~~~~~---~~--~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
.+.+-|||.|+.++..-+.+.. ++ ...|++++|++..+...++..|.++...+. ++.+..+|.+.+.+.++
T Consensus 129 ~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~ 204 (497)
T 3mc6_A 129 GTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVEL-DPTTYQVDLGKVKKFIN 204 (497)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECB-CTTTCSBCTTTTGGGCC
T ss_pred EEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEec-CcccCcCCHHHHHHHHh
Confidence 4567799999999988775421 11 137999999999999999999999888775 33456788877766543
No 389
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=32.35 E-value=2e+02 Score=26.50 Aligned_cols=95 Identities=9% Similarity=-0.003 Sum_probs=49.7
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC--CCCc
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--PERS 311 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--~~~~ 311 (583)
..|++++|=.. +...+...|..|++.+-.-..... .++..|.++..+.. |-. |.+.+.+.++.. ..+.
T Consensus 12 VTGas~GIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 12 VIGAGDYIGAE--IAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL-DAR----NEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp EECCSSHHHHH--HHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEEC-CTT----CHHHHHHHHHHHHHHSCE
T ss_pred EECCCchHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEC-cCC----CHHHHHHHHHHHHhhCCc
Confidence 45666666443 334444458788776554333333 33445777777776 432 555554444321 1344
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q psy14428 312 ILFLQTSSHNPTGV--DLSEDQWRQLAVV 338 (583)
Q Consensus 312 ~~i~i~~p~NPTG~--~~s~~~~~~l~~~ 338 (583)
.+++.+--..+.+. ..+.+++++..+.
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEM 113 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 55554333333222 4677888777664
No 390
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=32.17 E-value=24 Score=34.86 Aligned_cols=48 Identities=8% Similarity=0.081 Sum_probs=40.0
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 56 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~ 56 (583)
|=|||.|+.++..-+.+ ++ .+|.+++|+|..+...++..|.++..++.
T Consensus 88 t~g~~~al~~~~~~l~~--~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~ 135 (360)
T 3hdo_A 88 ANGSDEVLNNLIRAFAA--EG-EEIGYVHPSYSYYGTLAEVQGARVRTFGL 135 (360)
T ss_dssp ESSHHHHHHHHHHHHCC--TT-CEEEEESSSCTHHHHHHHHHTCEEEEECB
T ss_pred cCCHHHHHHHHHHHHhC--CC-CEEEEcCCChHHHHHHHHHCCCEEEEeeC
Confidence 45788899988876643 55 67999999999999999999999888776
No 391
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.03 E-value=86 Score=29.60 Aligned_cols=99 Identities=8% Similarity=0.016 Sum_probs=50.6
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC------------C---hhhHHHHhhcCCeEEEEecccCCCCCC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT------------W---NGHVRFCTDSRLNVGAYRYFDNKTNGL 295 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~------------y---~~~~~~~~~~G~~~~~v~~~d~~~~g~ 295 (583)
.+++ ..|++++|=.. +...+...|..|++.+-. - ......++..|.++..+.. |-.
T Consensus 11 k~vl--VTGas~gIG~~--ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~~---- 81 (287)
T 3pxx_A 11 KVVL--VTGGARGQGRS--HAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEV-DVR---- 81 (287)
T ss_dssp CEEE--EETTTSHHHHH--HHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEEC-CTT----
T ss_pred CEEE--EeCCCChHHHH--HHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEc-cCC----
Confidence 3444 45666666443 334444458777764322 1 1112233445677777766 432
Q ss_pred ChhhHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 296 DFAGMMEDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 296 d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
|.+.+.+.+++. ..+..+++.+--..+.+...+.+++++..+.
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 555555444321 1244555544333344444778888777664
No 392
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=31.60 E-value=1.5e+02 Score=27.26 Aligned_cols=95 Identities=9% Similarity=-0.022 Sum_probs=47.2
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|+++++=.. +...+...|..|++..-.-.......+..+.++..++. |-. |.+.+.+.+++. ..+..+
T Consensus 17 VTGasggiG~~--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 17 ITGGASGLGLA--TAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA-DVT----SEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEEC-CTT----CHHHHHHHHHHHHHHHSCCCE
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEc-CCC----CHHHHHHHHHHHHHHCCCCCE
Confidence 44666666443 33444444777776544433444455555666666665 432 555555554321 123445
Q ss_pred EEeCCCCCCCCC--------CCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTGV--------DLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG~--------~~s~~~~~~l~~~ 338 (583)
++.+-.....+. ..+.+++++..+.
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDV 122 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHH
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHH
Confidence 543322222221 2577777766653
No 393
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=31.28 E-value=1.5e+02 Score=27.78 Aligned_cols=100 Identities=12% Similarity=0.045 Sum_probs=52.6
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM--- 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~--- 307 (583)
.+++ ..|++++|=.. +...+...|.+|++.+-.-.......+..|.++..+.. |-. |.+.+.+.++..
T Consensus 12 k~vl--VTGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 12 KVAI--ITGACGGIGLE--TSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV-DLT----NEVSVRALIDFTIDT 82 (271)
T ss_dssp CEEE--EETTTSHHHHH--HHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEEC-CTT----CHHHHHHHHHHHHHH
T ss_pred CEEE--EECCCcHHHHH--HHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEEC-CCC----CHHHHHHHHHHHHHH
Confidence 3444 45666666443 33344445888877765555555566666666666665 432 555555444321
Q ss_pred CCCcEEEEeCCCCC-C-CC--CCCCHHHHHHHHHHH
Q psy14428 308 PERSILFLQTSSHN-P-TG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 308 ~~~~~~i~i~~p~N-P-TG--~~~s~~~~~~l~~~a 339 (583)
-.+..+++.+-... | .+ ..++.+++++..+.-
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN 118 (271)
T 3tzq_B 83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN 118 (271)
T ss_dssp HSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 12344454332222 2 11 145788888776643
No 394
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=31.20 E-value=1.4e+02 Score=28.23 Aligned_cols=100 Identities=13% Similarity=0.082 Sum_probs=53.4
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC--
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-- 307 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-- 307 (583)
..+++ ..|++++|=.. +...+...|..|++.+-.-.......+..+.++..+.. |-. |.+.+.+.+++.
T Consensus 28 ~k~~l--VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 28 KKIAI--VTGAGSGVGRA--VAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPT-DVT----DPDSVRALFTATVE 98 (272)
T ss_dssp CCEEE--ETTTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEEC-CTT----SHHHHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEe-cCC----CHHHHHHHHHHHHH
Confidence 34555 56777776543 33444445888887765544555555655666666665 432 555555544321
Q ss_pred -CCCcEEEEeCCCCC-CCC--CCCCHHHHHHHHHH
Q psy14428 308 -PERSILFLQTSSHN-PTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 308 -~~~~~~i~i~~p~N-PTG--~~~s~~~~~~l~~~ 338 (583)
..+..+++.+---. |.+ ..++.++++++.+.
T Consensus 99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 12344444332221 212 23678888887764
No 395
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=31.19 E-value=1.9e+02 Score=26.63 Aligned_cols=95 Identities=13% Similarity=0.062 Sum_probs=47.3
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCC-hhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTW-NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSI 312 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y-~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~ 312 (583)
..|+++++=.. +...+...|..|++.+-.- ......++..|.++..++. |-. |.+.+++.+++. ..+..
T Consensus 12 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 12 ITGGANGIGRA--IAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKC-DVS----QPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEEC-CTT----CHHHHHHHHHHHHHHHSCCC
T ss_pred EeCCCcHHHHH--HHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEe-ecC----CHHHHHHHHHHHHHHcCCCC
Confidence 44666666443 3333444477777654332 2233334455666766666 432 555555544321 12344
Q ss_pred EEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 313 LFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 313 ~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
+++.+-...+.+ ...+.++++++.+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 554433222222 23577888777664
No 396
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=31.17 E-value=96 Score=28.48 Aligned_cols=96 Identities=10% Similarity=-0.062 Sum_probs=47.9
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++++|=.. +...+...|..|++.+-.-.......+..+.++..+.. |-. |.+.+.+.+++. ..+..+
T Consensus 8 VTGas~GIG~a--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 8 VTGAGSGLGRA--LTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVA-DLA----HHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp EESTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEC-CTT----SHHHHHHHHHHHHHHHCSCSE
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEEC-CCC----CHHHHHHHHHHHHHhcCCCcE
Confidence 45666666543 33344445888887765544444444444445555655 332 455554444322 123444
Q ss_pred EEeCCCCCCCCC--CCCHHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTGV--DLSEDQWRQLAVVV 339 (583)
Q Consensus 314 i~i~~p~NPTG~--~~s~~~~~~l~~~a 339 (583)
++.+-...+.+. .++.++++++.+.-
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N 108 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESN 108 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHH
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHH
Confidence 443322222221 45788888877643
No 397
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=30.89 E-value=36 Score=33.79 Aligned_cols=66 Identities=12% Similarity=0.021 Sum_probs=46.8
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCch--hhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGH--VRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~--~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|+|..+ ..+++..|.++..++.- . ...+|.+.+.+.++
T Consensus 63 ~~t~g~t~a~~~~~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~l~ 130 (392)
T 2z9v_A 63 ILHGEPVLGLEAAAASLIS--PD-DVVLNLASGVYGKGFGYWAKRYSPHLLEIEVP-Y-NEAIDPQAVADMLK 130 (392)
T ss_dssp EESSCTHHHHHHHHHHHCC--TT-CCEEEEESSHHHHHHHHHHHHHCSCEEEEECC-T-TSCCCHHHHHHHHH
T ss_pred EEeCCchHHHHHHHHHhcC--CC-CEEEEecCCcccHHHHHHHHHcCCceEEeeCC-C-CCCCCHHHHHHHHh
Confidence 4467899999999887732 55 6799999998654 33445578888887752 2 24588887776664
No 398
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=30.74 E-value=34 Score=34.19 Aligned_cols=50 Identities=6% Similarity=-0.205 Sum_probs=38.3
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~ 56 (583)
+-+-|||.|+.++...+.+ ++ ..|.+++|+++.+...++..|.++..+++
T Consensus 109 i~~~sGs~a~~~~~~~~~~--~g-d~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (401)
T 1fc4_A 109 ILYSSCFDANGGLFETLLG--AE-DAIISDALNHASIIDGVRLCKAKRYRYAN 158 (401)
T ss_dssp EEESCHHHHHHTTHHHHCC--TT-CEEEEETTCCHHHHHHHHTSCSEEEEECT
T ss_pred EEeCChHHHHHHHHHHHcC--CC-CEEEEcchhHHHHHHHHHHcCCceEEECC
Confidence 3456888888876665532 44 68999999998888888888998887763
No 399
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.64 E-value=1.9e+02 Score=27.08 Aligned_cols=100 Identities=13% Similarity=0.080 Sum_probs=51.8
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
.+++ ..|++++|=.. +...+...|..|++..-.-..... .++..|.++..+.. |-. |.+.+.+.+++.
T Consensus 5 k~~l--VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~ 75 (264)
T 3tfo_A 5 KVIL--ITGASGGIGEG--IARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL-DVT----DRHSVAAFAQAA 75 (264)
T ss_dssp CEEE--ESSTTSHHHHH--HHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEEC-CTT----CHHHHHHHHHHH
T ss_pred CEEE--EeCCccHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEc-CCC----CHHHHHHHHHHH
Confidence 3445 56666666543 334444458888776544333322 23444777777766 432 555555444321
Q ss_pred ---CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHH
Q psy14428 308 ---PERSILFLQTSSHNPTGV--DLSEDQWRQLAVVV 339 (583)
Q Consensus 308 ---~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~a 339 (583)
..+..+++.+-.-.+.+. .++.++++++.+.-
T Consensus 76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN 112 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVN 112 (264)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 123445554333333232 35788888877643
No 400
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=30.45 E-value=46 Score=33.85 Aligned_cols=50 Identities=12% Similarity=0.052 Sum_probs=39.1
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~ 56 (583)
+-+-|||.|+..+...+.+ ++ ..|.+++|+++.+...++..|.++..|++
T Consensus 128 i~~~sGs~a~~~al~~l~~--~g-d~vl~~~~~h~~~~~~~~~~g~~~~~~~~ 177 (427)
T 2w8t_A 128 IVFSTGYMANLGIISTLAG--KG-EYVILDADSHASIYDGCQQGNAEIVRFRH 177 (427)
T ss_dssp EEESCHHHHHHHHHHHHSC--TT-CEEEEETTCCHHHHHHHHHSCSEEEEECT
T ss_pred EEecCcHHHHHHHHHHhcC--CC-CEEEECCcccHHHHHHHHHcCCeeEEeCC
Confidence 4456888888876655432 44 68999999999999999999998888874
No 401
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=30.37 E-value=2.5e+02 Score=26.46 Aligned_cols=99 Identities=8% Similarity=0.016 Sum_probs=51.8
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCCh----------hhHHHHhhcCCeEEEEecccCCCCCCChhhH
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWN----------GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~----------~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l 300 (583)
.+++ ..|++++|=.. +...+...|.+|++..-.-. .....++..|.++..+.. |-. |.+.+
T Consensus 10 k~vl--VTGas~GIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v 80 (285)
T 3sc4_A 10 KTMF--ISGGSRGIGLA--IAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVG-DIR----DGDAV 80 (285)
T ss_dssp CEEE--EESCSSHHHHH--HHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEEC-CTT----SHHHH
T ss_pred CEEE--EECCCCHHHHH--HHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEEC-CCC----CHHHH
Confidence 3444 45666666543 34445555888876543322 223334555778877776 432 55555
Q ss_pred HHHHHcC---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 301 MEDIKAM---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 301 ~~~l~~~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
.+.+++. ..+..+++.+-...+.+ ..++.++++++.+.
T Consensus 81 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 81 AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5544322 12344554433222222 24678888877654
No 402
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=30.37 E-value=31 Score=33.66 Aligned_cols=61 Identities=16% Similarity=0.087 Sum_probs=43.4
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchh--hhhhcCCCceeeeeccCCCCcccchhhh
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV--RFCTDSRLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~--~~~~~~~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
+-|-|||.|+.++...+.+ ++ .+|.+++|++..+. .+++..|.++..++.-+ ...+|.+.+
T Consensus 55 ~~~~g~t~a~~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l 117 (352)
T 1iug_A 55 ILTGSGTLAMEALVKNLFA--PG-ERVLVPVYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDV 117 (352)
T ss_dssp EEESCHHHHHHHHHHHHCC--TT-CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTS
T ss_pred EEcCchHHHHHHHHHhccC--CC-CeEEEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHH
Confidence 4456899999999887733 55 67999999998875 44456788888777522 234666554
No 403
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=30.34 E-value=2e+02 Score=26.55 Aligned_cols=95 Identities=9% Similarity=0.012 Sum_probs=48.1
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|+++++=.. +...+...|..|++.+-.-.......+..|.++..+.. |-. |.+.+.+.++.. ..+..+
T Consensus 11 VTGas~giG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 11 VTGGASGVGLE--VVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRH-DVS----SEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp ETTTTSHHHHH--HHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECC-CTT----CHHHHHHHHHHHHHHHCSCCE
T ss_pred EeCCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEc-cCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 45666666443 33444445888877665433334444444656666655 332 555555444322 123344
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+-...+.+ ...+.+++++..+.
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKI 110 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHh
Confidence 54332222222 23577888777664
No 404
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=29.94 E-value=2.1e+02 Score=26.90 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=51.6
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
.+++ ..|++++|=.. +...+...|..|++..-.-....... ...|.++..+.. |-. |.+.+.+.+++
T Consensus 28 k~~l--VTGas~GIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~ 98 (277)
T 4fc7_A 28 KVAF--ITGGGSGIGFR--IAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM-DVR----APPAVMAAVDQ 98 (277)
T ss_dssp CEEE--EETTTSHHHHH--HHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEEC-CTT----CHHHHHHHHHH
T ss_pred CEEE--EeCCCchHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEc-CCC----CHHHHHHHHHH
Confidence 4455 55666666543 44445555888877655433333322 224667777766 432 55555544432
Q ss_pred C---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 307 M---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 307 ~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
. ..+..+++.+---.+.+ ..++.+++++..+.
T Consensus 99 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 99 ALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 2 12344454332222222 23678888887764
No 405
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=29.30 E-value=2.1e+02 Score=27.27 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=50.3
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC------------Ch---hhHHHHhhcCCeEEEEecccCCCCCC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT------------WN---GHVRFCTDSRLNVGAYRYFDNKTNGL 295 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~------------y~---~~~~~~~~~G~~~~~v~~~d~~~~g~ 295 (583)
.+++ ..|++++|=.. +...+...|..|++.+-. -. .....++..|.++..+.. |-.
T Consensus 29 k~~l--VTGas~GIG~a--ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~---- 99 (299)
T 3t7c_A 29 KVAF--ITGAARGQGRS--HAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQV-DVR---- 99 (299)
T ss_dssp CEEE--EESTTSHHHHH--HHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CTT----
T ss_pred CEEE--EECCCCHHHHH--HHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEEC-CCC----
Confidence 3444 45666666543 333444458888764322 11 112233455777777776 432
Q ss_pred ChhhHHHHHHcC---CCCcEEEEeCCCCCCCC---CCCCHHHHHHHHHH
Q psy14428 296 DFAGMMEDIKAM---PERSILFLQTSSHNPTG---VDLSEDQWRQLAVV 338 (583)
Q Consensus 296 d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG---~~~s~~~~~~l~~~ 338 (583)
|.+.+.+.+++. ..+..+++.+--..+.+ ..++.+++++..+.
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 555555554321 12344444433222222 24688888887764
No 406
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=29.11 E-value=2.4e+02 Score=26.79 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=51.2
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHh---hcC-CeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCT---DSR-LNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~G-~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
.+++ ..|++++|=.. +...+...|..|++.+-.-.......+ ..| .++..+.. |-. |.+.+.+.+++
T Consensus 42 k~vl--VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~ 112 (293)
T 3rih_A 42 RSVL--VTGGTKGIGRG--IATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL-DVS----DPGSCADAART 112 (293)
T ss_dssp CEEE--ETTTTSHHHHH--HHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEEC-CTT----CHHHHHHHHHH
T ss_pred CEEE--EeCCCcHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEE-eCC----CHHHHHHHHHH
Confidence 3444 55666666443 334444458788776655444433333 333 45666665 432 55555444432
Q ss_pred C---CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHH
Q psy14428 307 M---PERSILFLQTSSHNPTGV--DLSEDQWRQLAVVV 339 (583)
Q Consensus 307 ~---~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~a 339 (583)
. -.+..+++.+--..+.+. .++.++++++.+.-
T Consensus 113 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN 150 (293)
T 3rih_A 113 VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVN 150 (293)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 2 123445544333233332 46888888887643
No 407
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=29.03 E-value=3e+02 Score=26.97 Aligned_cols=99 Identities=7% Similarity=-0.062 Sum_probs=51.7
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCCh----------hhHHHHhhcCCeEEEEecccCCCCCCChhhH
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWN----------GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGM 300 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~----------~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l 300 (583)
.+++ ..|++++|=.. +...+...|..|++..-.-. .....++..|.++..+.. |-. |.+.+
T Consensus 46 k~vl--VTGas~GIG~a--ia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~-Dv~----d~~~v 116 (346)
T 3kvo_A 46 CTVF--ITGASRGIGKA--IALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIV-DVR----DEQQI 116 (346)
T ss_dssp CEEE--EETTTSHHHHH--HHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEEC-CTT----CHHHH
T ss_pred CEEE--EeCCChHHHHH--HHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEc-cCC----CHHHH
Confidence 4445 55666666543 33445455877776543322 233445566778887776 432 55555
Q ss_pred HHHHHcC---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 301 MEDIKAM---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 301 ~~~l~~~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
.+.+++. ..+..+++.+--..+.+ ...+.++++++.+.
T Consensus 117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~v 159 (346)
T 3kvo_A 117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNV 159 (346)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5555432 12444554433222222 34677888776553
No 408
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=28.84 E-value=48 Score=33.24 Aligned_cols=67 Identities=22% Similarity=0.117 Sum_probs=34.7
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCc---hhhhhhcCCCcee--eeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG---HVRFCTDSRLNVG--AYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n---~~~~~~~~~~~~~--~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+.+-|||.|+.++...+.+ ++ .+|.+++|++.. +.......|..+. .++ .++.+.++|++.+.+.++
T Consensus 98 v~~~~Gs~a~~~al~~~~~--~g-d~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~d~~~l~~~i~ 169 (425)
T 3ecd_A 98 VQPHSGAQANGAVMLALAK--PG-DTVLGMSLDAGGHLTHGAKPALSGKWFNALQYG-VSRDTMLIDYDQVEALAQ 169 (425)
T ss_dssp CCCSSHHHHHHHHHHHHCC--TT-CEEEEECC------------------CEEEEEC-CCTTTSSCCHHHHHHHHH
T ss_pred eecCchHHHHHHHHHHccC--CC-CEEEEcccccccceecchhhhhcccceeeeecC-CCcccCccCHHHHHHHHh
Confidence 3466899998887665522 45 689999999977 3222223344333 333 345567888877666554
No 409
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=28.80 E-value=81 Score=29.19 Aligned_cols=93 Identities=9% Similarity=-0.056 Sum_probs=44.3
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|+++++=.. +...+...|..|++..-.-.......+..|+..+..++ . |.+.+.+.++.. ..+..+
T Consensus 10 VTGas~giG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~---~----~~~~~~~~~~~~~~~~g~id~ 80 (245)
T 1uls_A 10 ITGAAHGIGRA--TLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDV---A----DPASVERGFAEALAHLGRLDG 80 (245)
T ss_dssp EESTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCT---T----CHHHHHHHHHHHHHHHSSCCE
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecC---C----CHHHHHHHHHHHHHHcCCCCE
Confidence 44666666443 33334445778876544333333344444644444333 1 455554444321 123444
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+-.-.+.+ ...+.+++++..+.
T Consensus 81 lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 81 VVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 54332222222 23567888777664
No 410
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=28.71 E-value=2.5e+02 Score=25.57 Aligned_cols=95 Identities=8% Similarity=0.072 Sum_probs=48.4
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhH---HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc---CCCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV---RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA---MPER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~---~~~~ 310 (583)
..|++++|=.. +...+...|.+|++..-.-.... ..++..|.++..+.. |-. |.+.+.+.+++ ...+
T Consensus 10 ITGas~gIG~~--~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 10 VTGASRGIGFE--VAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL-NIS----DIESIQNFFAEIKAENLA 82 (247)
T ss_dssp ESSCSSHHHHH--HHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEC-CTT----CHHHHHHHHHHHHHTTCC
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEe-cCC----CHHHHHHHHHHHHHHcCC
Confidence 45666665443 33344445888877655433332 233445777777766 432 55555444432 2234
Q ss_pred cEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q psy14428 311 SILFLQTSSHNPTGV--DLSEDQWRQLAVV 338 (583)
Q Consensus 311 ~~~i~i~~p~NPTG~--~~s~~~~~~l~~~ 338 (583)
..+++.+-...+.+. ..+.+++++..+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINT 112 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 445554322222221 3577888777664
No 411
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=28.70 E-value=1.2e+02 Score=29.08 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=35.6
Q ss_pred hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEe
Q psy14428 270 GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFD 349 (583)
Q Consensus 270 ~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~D 349 (583)
.....++..|++.+.+|+ .... .. .. + +.+.++++++.|.++|+.||.|
T Consensus 36 ~~~~~lk~~G~N~VRi~~-~~~~-~w------------~~-----------~------~~~~ld~~v~~a~~~Gi~Vild 84 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVL-SNGV-RW------------SK-----------N------GPSDVANVISLCKQNRLICMLE 84 (302)
T ss_dssp THHHHHHHTTCSEEEEEE-CCSS-SS------------CC-----------C------CHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCEEEEEc-cCCc-cc------------CC-----------C------CHHHHHHHHHHHHHCCCEEEEE
Confidence 345667788999999998 2210 00 00 0 3588899999999999999988
Q ss_pred cc
Q psy14428 350 MA 351 (583)
Q Consensus 350 e~ 351 (583)
-.
T Consensus 85 ~h 86 (302)
T 1bqc_A 85 VH 86 (302)
T ss_dssp EG
T ss_pred ec
Confidence 54
No 412
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=28.60 E-value=32 Score=35.60 Aligned_cols=29 Identities=24% Similarity=0.316 Sum_probs=25.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 320 HNPTGVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 320 ~NPTG~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
++|.|..+|++++++|++.|++++|-||=
T Consensus 82 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 82 NDPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CCTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 34678899999999999999999998773
No 413
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=28.34 E-value=1.6e+02 Score=27.18 Aligned_cols=95 Identities=9% Similarity=0.062 Sum_probs=48.1
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++++|=.. +...+...|.+|++..-.-.......+..+.+...+.. |-. |.+.+++.+++. ..+..+
T Consensus 14 VTGas~gIG~a--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 14 VTGASRGIGKA--IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL-NVT----NPESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp ESSCSSHHHHH--HHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEEC-CTT----CHHHHHHHHHHHHHHHCCCSE
T ss_pred EeCCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEE-eCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 45666666443 33344445888877655444444444444444555555 332 555555544322 123445
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+--..+.+ ..++.+++++..+.
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~v 113 (248)
T 3op4_A 87 LVNNAGITRDNLLMRMKEEEWSDIMET 113 (248)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 54432222222 23578888887764
No 414
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=27.98 E-value=22 Score=35.82 Aligned_cols=66 Identities=23% Similarity=0.119 Sum_probs=35.9
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchh---hhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHV---RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~---~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-|||.|+.++..-+.+ ++ .+|.+++|+++.|. ......|..+...++--..+..+|++.+.+.++
T Consensus 98 ~~sGs~a~~~a~~~~~~--~g-d~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~ 166 (420)
T 3gbx_A 98 PHSGSQANFAVYTALLQ--PG-DTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAK 166 (420)
T ss_dssp CSSHHHHHHHHHHHHCC--TT-CEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHH
T ss_pred ecCcHHHHHHHHHHhcC--CC-CEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHH
Confidence 45788888877554432 45 68999999998754 222333444444443222456688887766554
No 415
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=27.93 E-value=44 Score=33.41 Aligned_cols=64 Identities=16% Similarity=0.081 Sum_probs=45.5
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCc--hhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG--HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n--~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+=|||.|+.++..-+. -++ .+|.+++|++.. ...+.+..|.++..++.-+ ...+|.+.+.+.++
T Consensus 68 ~~s~t~al~~~~~~l~--~~g-d~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~ 133 (416)
T 3isl_A 68 DGTSRAGIEAVLASVI--EPE-DDVLIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIK 133 (416)
T ss_dssp ESCHHHHHHHHHHHHC--CTT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHhc--CCC-CEEEEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHh
Confidence 4478899998877662 255 679999999765 4456778898888877532 34678887776665
No 416
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=27.78 E-value=25 Score=34.73 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=46.6
Q ss_pred ccchhhhHHHHHhh----hhhcccccchhhhHHHHHHHhCCCCcEEEeCCCCCCChHhHhhhcCCccccccc
Q psy14428 63 GLDFAGMMEDIKLA----IVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 130 (583)
Q Consensus 63 ~~d~~~~~~~~~~a----~~q~~~gtgal~~~~~~~~~~~~~~~~~~i~~ptw~nh~~if~~~g~~~~~y~Y 130 (583)
..++...+.+.-.+ -+-|.|||.|+.++...+ ++ ..|.+.+|+|......++..|.++..++.
T Consensus 61 ~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~----~g-d~vl~~~p~y~~~~~~~~~~g~~~~~v~~ 127 (364)
T 1lc5_A 61 YFHLHQALARHHQVPASWILAGNGETESIFTVASGL----KP-RRAMIVTPGFAEYGRALAQSGCEIRRWSL 127 (364)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH----CC-SEEEEEESCCTHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc----CC-CeEEEeCCCcHHHHHHHHHcCCeEEEEeC
Confidence 45566666554332 234568888999887776 44 78999999999999888888988877664
No 417
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=27.77 E-value=2.2e+02 Score=26.42 Aligned_cols=99 Identities=10% Similarity=0.030 Sum_probs=52.0
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCC---hh---hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHH
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTW---NG---HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y---~~---~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
.+++ ..|++++|=.. +...+...|..|++..-.- .. ....++..|.++..+.. |-. |.+.+.+.+
T Consensus 12 k~vl--VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----d~~~v~~~~ 82 (262)
T 3ksu_A 12 KVIV--IAGGIKNLGAL--TAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQS-DLS----NEEEVAKLF 82 (262)
T ss_dssp CEEE--EETCSSHHHHH--HHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEEC-CCC----SHHHHHHHH
T ss_pred CEEE--EECCCchHHHH--HHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEEC-CCC----CHHHHHHHH
Confidence 3444 45666676554 4555666688887743221 11 12233444777877776 432 555555544
Q ss_pred HcC---CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q psy14428 305 KAM---PERSILFLQTSSHNPTGV--DLSEDQWRQLAVV 338 (583)
Q Consensus 305 ~~~---~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~ 338 (583)
++. ..+..+++.+---.+.+. ..+.++++++.+.
T Consensus 83 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 83 DFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 322 234455554332222222 3577888777664
No 418
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=27.75 E-value=1.3e+02 Score=28.09 Aligned_cols=99 Identities=9% Similarity=0.024 Sum_probs=50.4
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCC-CCh---hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTP-TWN---GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P-~y~---~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
.+++ ..|++++|=.. +...+...|..|++..- .-. .....++..|.++..+.. |-. |.+.+.+.+++
T Consensus 19 k~~l--VTGas~gIG~a--ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~ 89 (270)
T 3is3_A 19 KVAL--VTGSGRGIGAA--VAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA-DIR----QVPEIVKLFDQ 89 (270)
T ss_dssp CEEE--ESCTTSHHHHH--HHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC-CTT----SHHHHHHHHHH
T ss_pred CEEE--EECCCchHHHH--HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEc-CCC----CHHHHHHHHHH
Confidence 4445 55666666443 33444445888876322 211 223334455777777776 432 55555555433
Q ss_pred C---CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q psy14428 307 M---PERSILFLQTSSHNPTGV--DLSEDQWRQLAVV 338 (583)
Q Consensus 307 ~---~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~ 338 (583)
. ..+..+++.+-...+.+. .++.+++++..+.
T Consensus 90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 2 123444543322223232 3578888877764
No 419
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=27.73 E-value=34 Score=35.95 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=53.5
Q ss_pred eecccchhHHHHHHHHHHhhcC-----CCeEEecCCCCcCchhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYP-----GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~-----~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+-+-|||.|+.++...+.+.-. ...+|++++|++..+...++..|.++...+.-+ +..+|++.+.+.++
T Consensus 164 ~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~ 237 (514)
T 3mad_A 164 TVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDA--DYRADVAAMREAIT 237 (514)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCT--TSCBCHHHHHHHCC
T ss_pred EEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhc
Confidence 5677999999999888765210 013799999999999999999999988887633 56789888877654
No 420
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=27.68 E-value=33 Score=35.32 Aligned_cols=67 Identities=21% Similarity=0.166 Sum_probs=43.0
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhh---hhc--CCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---CTD--SRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~---~~~--~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+++-|||.|+..+...+.+ ++ .+|.+++|+++.|... ... .++.+..|+ .++.+..+|++.+-+.++
T Consensus 111 v~~~sGs~a~~~a~~~~~~--~G-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~d~~~l~~~i~ 182 (447)
T 3h7f_A 111 VQPHSGAQANAAVLHALMS--PG-ERLLGLDLANGGHLTHGMRLNFSGKLYENGFYG-VDPATHLIDMDAVRATAL 182 (447)
T ss_dssp CCCSSHHHHHHHHHHHHCC--TT-CEEEEECGGGTCCGGGTCTTSHHHHSSEEEEEC-CCTTTCSCCHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHhcC--CC-CEEEecCcccccccchhhhhhhcCCeeEEEEcC-cCcccCCcCHHHHHHHHH
Confidence 4577999998877665533 55 6899999998875322 112 223333333 345566799988877764
No 421
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=27.46 E-value=2.2e+02 Score=26.16 Aligned_cols=95 Identities=13% Similarity=0.087 Sum_probs=49.9
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|++++|=.. +...+...|..|++.+-.-.......+..+.++..+.. |-. |.+.+++.+++. ..+..+
T Consensus 14 ITGas~gIG~~--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 14 ITGAGSGFGEG--MAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAA-DIS----KEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-CTT----SHHHHHHHHHHHHHHHSCCCE
T ss_pred EECCCchHHHH--HHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEe-cCC----CHHHHHHHHHHHHHhcCCCCE
Confidence 44565665433 33344445888887766555555566666777777766 432 455555444321 123344
Q ss_pred EEeCCCC-CCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSH-NPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~-NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+-.. .+.+ ...+.+++++..+.
T Consensus 87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 3n74_A 87 LVNNAGIGHKPQNAELVEPEEFDRIVGV 114 (261)
T ss_dssp EEECCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 4433221 1112 22477888777664
No 422
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=27.36 E-value=84 Score=31.97 Aligned_cols=57 Identities=7% Similarity=0.027 Sum_probs=38.4
Q ss_pred hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q psy14428 271 HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDM 350 (583)
Q Consensus 271 ~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De 350 (583)
....++..|++.+.+|+ .-. .+. +.+.+|.-. -..+.+++++++|+++|+.||.|-
T Consensus 78 D~~~ik~~G~N~VRipi-~~~--~~~--------------------~~~~~py~~-~~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 78 DFKQISNLGLNFVRIPI-GYW--AFQ--------------------LLDNDPYVQ-GQVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHTTCCEEEEEE-EGG--GTC--------------------CCTTCCCCC-CHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEEcc-cHH--Hcc--------------------CCCCCccch-hHHHHHHHHHHHHHHCCCEEEEEe
Confidence 34556788999999999 221 110 012223210 147899999999999999999996
Q ss_pred c
Q psy14428 351 A 351 (583)
Q Consensus 351 ~ 351 (583)
-
T Consensus 134 H 134 (399)
T 3n9k_A 134 H 134 (399)
T ss_dssp E
T ss_pred c
Confidence 4
No 423
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=27.08 E-value=57 Score=32.71 Aligned_cols=50 Identities=10% Similarity=-0.051 Sum_probs=38.4
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~ 56 (583)
+-+-|||.|+..+..-+.+ ++ ..|.+++|++..+...++..|.++..|+.
T Consensus 123 i~~~sGt~a~~~~l~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~ 172 (409)
T 3kki_A 123 LLSQSGWNANVGLLQTICQ--PN-TNVYIDFFAHMSLWEGARYANAQAHPFMH 172 (409)
T ss_dssp EEESCHHHHHHHHHHHHCC--TT-CEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred EEecchHHHHHHHHHHhcC--CC-CEEEECCCcCHHHHHHHHHcCCeEEEecC
Confidence 3456888888766654432 45 68999999999999889999988877765
No 424
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=26.97 E-value=3.2e+02 Score=23.84 Aligned_cols=102 Identities=13% Similarity=0.055 Sum_probs=57.1
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCC--CCCEEEEcCCCChhhHHHHhhcCC---eEEEEecccCCCCCCChhhHHHHHH
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYP--GVKTVYFPTPTWNGHVRFCTDSRL---NVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~--~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
+|+. ...+.+.+.++.-+++.+.. .+..|+...|-+..+...++..|+ +++.+...++.+ -+..+|++++
T Consensus 48 Ell~--~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~d---aLwa~EqALr 122 (161)
T 1oft_A 48 ELSL--SGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAA---ALALSCEALR 122 (161)
T ss_dssp EEEE--ESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTTH---HHHHHHHHHH
T ss_pred EEcc--CCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChHH---HHHHHHHHHh
Confidence 4544 33333334444445555542 345666667777788888888997 456665422211 3556667773
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeE
Q psy14428 306 AMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLY 345 (583)
Q Consensus 306 ~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~ 345 (583)
.+..-.|+.-.. .++..+.++|---|++.+..
T Consensus 123 ---sG~~~aVl~Wl~-----~l~~~~~RRLqlAAe~g~~~ 154 (161)
T 1oft_A 123 ---LGRSHTVVSWLE-----PLSRAARKQLSRAAQLGQAQ 154 (161)
T ss_dssp ---TTCEEEEEECCS-----SCCHHHHHHHHHHHHHTTCE
T ss_pred ---cCCccEEEECCC-----cCChHHHHHHHHHHHhCCCe
Confidence 344444444332 26777887776666665543
No 425
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=26.79 E-value=1.8e+02 Score=26.52 Aligned_cols=76 Identities=7% Similarity=-0.086 Sum_probs=41.1
Q ss_pred CCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 229 DNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 229 ~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
...|+| .|++++|=.. +...+...|..|++..-.-.......+..+.++..+.. |-. |.+.+.+.+++..
T Consensus 14 ~k~vlV---TGas~gIG~~--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 14 GKTSLI---TGASSGIGSA--IARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVC-NLA----NKEECSNLISKTS 83 (249)
T ss_dssp TCEEEE---TTTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEEC-CTT----SHHHHHHHHHTCS
T ss_pred CCEEEE---ECCCChHHHH--HHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEc-CCC----CHHHHHHHHHhcC
Confidence 344555 4566665433 33344445888887765544455555555545555544 332 6677777776542
Q ss_pred CCcEEEE
Q psy14428 309 ERSILFL 315 (583)
Q Consensus 309 ~~~~~i~ 315 (583)
+..+++
T Consensus 84 -~id~li 89 (249)
T 3f9i_A 84 -NLDILV 89 (249)
T ss_dssp -CCSEEE
T ss_pred -CCCEEE
Confidence 344444
No 426
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=26.73 E-value=60 Score=31.97 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=45.3
Q ss_pred cccchhHHHHHHHHHHh-hcCCCeEE-ecCCCCcCchh-hhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLER-FYPGVKTV-YFPTPTWNGHV-RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~-~~~~~~~~-~~~~p~w~n~~-~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
|-|||.|+.++...+.+ +-++ .+| .+.+|++.+.. ..++..|.++..++..+ .+..+|.+.+.+.++
T Consensus 65 ~~g~t~al~~~~~~~~~~~~~g-d~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~ 134 (385)
T 2bkw_A 65 AGSGTLGWDIFASNFILSKAPN-KNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLK-IGESVPLELITEKLS 134 (385)
T ss_dssp ESCTTHHHHHHHHHHSCTTCSC-CEEEEECSSHHHHHHHHHHHHTTCEEEEECCSS-TTSCCCHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCCceEEEecCC-CCCCCCHHHHHHHHh
Confidence 45889999999887752 1255 455 55578888774 66777898887776532 345578777665554
No 427
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=26.70 E-value=88 Score=31.87 Aligned_cols=59 Identities=12% Similarity=0.050 Sum_probs=39.3
Q ss_pred hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEec
Q psy14428 271 HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDM 350 (583)
Q Consensus 271 ~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De 350 (583)
....++..|++.+.+|+ ... .+. +.+.+|--.--..+.+++++++|+++|+.||.|-
T Consensus 78 d~~~i~~~G~N~VRipi-~~~--~~~--------------------~~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDl 134 (408)
T 1h4p_A 78 DFANIASQGFNLVRIPI-GYW--AFQ--------------------ILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDL 134 (408)
T ss_dssp HHHHHHHTTCCEEEEEE-EGG--GTC--------------------CCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHCCCCEEEccC-CHH--Hcc--------------------cCCCCCCccccHHHHHHHHHHHHHHCCCEEEEEC
Confidence 34566789999999998 221 110 0122231000256889999999999999999997
Q ss_pred cC
Q psy14428 351 AY 352 (583)
Q Consensus 351 ~Y 352 (583)
..
T Consensus 135 H~ 136 (408)
T 1h4p_A 135 HG 136 (408)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 428
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=26.62 E-value=2.4e+02 Score=25.26 Aligned_cols=124 Identities=18% Similarity=0.148 Sum_probs=73.1
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCeEEEecCCchhHHHH-HHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEE
Q psy14428 205 IGGDAKFCKLAAQLAYGEDFPAFKDNRLAIVQGISGSGSLRV-GTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVG 283 (583)
Q Consensus 205 ~~G~~~Lr~aia~~~~~~~g~~~~~~~I~i~~t~G~~~al~l-~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~ 283 (583)
..-.++...++...+.. ..++.+|+..||++.+.- +..++..-...|..|.+-.|+-..-....+..+.+-.
T Consensus 33 ~~~~~~~~~a~~~l~~s-------~~~~~iv~g~ggs~~~~~~~a~L~~~a~~~Gr~V~vLAp~~~s~~~l~~~~~l~~~ 105 (189)
T 2l8b_A 33 VPRTAGYSDAVSVLAQD-------RPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGE 105 (189)
T ss_dssp CCCHHHHHHHHHHHHHH-------SCCEECCBCSSCSHHHHHHHHHHHHHHHHTTCCEEEECSTTHHHHHHSCTTTCSSC
T ss_pred cccCccchhHHHHHhcc-------CCceEEEecccchHHHHHHHHHHHHHHHhcCeEEEEEcCchHHHHHHHhhcCcCcc
Confidence 34457788888888753 467778788888888765 2233333344588999999998877766666554222
Q ss_pred EEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCe-EEEEecc
Q psy14428 284 AYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHL-YPFFDMA 351 (583)
Q Consensus 284 ~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i-~iI~De~ 351 (583)
.+.. +.+..+.. .+ .++..+||= -+--+|..|+..|++.|+++|. +|+.|+.
T Consensus 106 t~t~-----~~ll~~~~--~~---tp~s~lIVD------~AekLS~kE~~~Lld~A~~~naqvvll~~~ 158 (189)
T 2l8b_A 106 LITG-----RRQLLEGM--AF---TPGSTVIVD------QGEKLSLKETLTLLDGAARHNVQVLITDSG 158 (189)
T ss_dssp SSST-----TTTTTTSC--CC---CCCCEEEEE------ESSSHHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eeeh-----hhhhcCCC--CC---CCCCEEEEe------chhhcCHHHHHHHHHHHHhcCCEEEEeCCc
Confidence 2211 00000000 00 122333331 2456788888888888888765 5555665
No 429
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=26.59 E-value=3.1e+02 Score=25.68 Aligned_cols=136 Identities=9% Similarity=0.022 Sum_probs=68.7
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCC--hhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTW--NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y--~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
+.+++ ..|++.+|=.. +...|...|-.|++..-.- ......+...|.++..++. |-. |.+.+++.+++.
T Consensus 7 gKval--VTGas~GIG~a--ia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~v~~~ 77 (258)
T 4gkb_A 7 DKVVI--VTGGASGIGGA--ISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPV-ELQ----DDAQCRDAVAQT 77 (258)
T ss_dssp TCEEE--EETTTSHHHHH--HHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEEC-CTT----CHHHHHHHHHHH
T ss_pred CCEEE--EeCCCCHHHHH--HHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEe-ecC----CHHHHHHHHHHH
Confidence 45666 56777777543 3333444477776654322 2233344556777777766 432 444444444322
Q ss_pred ---CCCcEEEEeCCC-CCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecC
Q psy14428 308 ---PERSILFLQTSS-HNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSF 383 (583)
Q Consensus 308 ---~~~~~~i~i~~p-~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 383 (583)
-.+..+++.+-- +.+.....+.++|+++.+.--.. . |.. -...++.+....+++|.+.|.
T Consensus 78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g-~----------~~~-----~~~~~p~m~~~~G~IVnisS~ 141 (258)
T 4gkb_A 78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIH-Y----------YAM-----AHYCVPHLKATRGAIVNISSK 141 (258)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHH-H----------HHH-----HHHHHHHHHHHTCEEEEECCT
T ss_pred HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHH-H----------HHH-----HHHHHHHHHhcCCeEEEEeeh
Confidence 123444443321 22444567899998887753221 0 000 001122222346889999887
Q ss_pred ccccccc
Q psy14428 384 SKNMGLY 390 (583)
Q Consensus 384 SK~~~l~ 390 (583)
+=..+.|
T Consensus 142 ~~~~~~~ 148 (258)
T 4gkb_A 142 TAVTGQG 148 (258)
T ss_dssp HHHHCCS
T ss_pred hhccCCC
Confidence 6544433
No 430
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=26.34 E-value=2.7e+02 Score=25.65 Aligned_cols=99 Identities=11% Similarity=0.054 Sum_probs=50.8
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
.+++ ..|++++|=.. +...+...|..|++.+-.-..... .++..|.++..+.. |-. |.+.+.+.+++.
T Consensus 13 k~vl--VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~ 83 (256)
T 3gaf_A 13 AVAI--VTGAAAGIGRA--IAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC-NVT----DEQHREAVIKAA 83 (256)
T ss_dssp CEEE--ECSCSSHHHHH--HHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEC-CTT----CHHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEC-CCC----CHHHHHHHHHHH
Confidence 4444 45666666443 333344447888776554333332 33445777777766 432 555555444321
Q ss_pred ---CCCcEEEEeCCCCC-CCCCCCCHHHHHHHHHH
Q psy14428 308 ---PERSILFLQTSSHN-PTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 308 ---~~~~~~i~i~~p~N-PTG~~~s~~~~~~l~~~ 338 (583)
..+..+++.+--.. +.....+.+++++..+.
T Consensus 84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~v 118 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKL 118 (256)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
Confidence 12344454332222 22225788888887664
No 431
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=26.31 E-value=66 Score=32.38 Aligned_cols=75 Identities=9% Similarity=0.014 Sum_probs=41.5
Q ss_pred hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEE
Q psy14428 271 HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM-PERSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFF 348 (583)
Q Consensus 271 ~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~-~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~ 348 (583)
+...+..++.++...-+.|...+.+....+.+.-... ......+ .+ ..+.+..+|++++++|++.|++++|-||=
T Consensus 38 ~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~--~~-~~~~~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 38 FIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIY--IN-PYTGKPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp HHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCE--EC-TTTCCEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCc--CC-CCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3455667788888888855433444322110000000 0000011 01 12234579999999999999999998773
No 432
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=26.01 E-value=1.3e+02 Score=29.73 Aligned_cols=26 Identities=15% Similarity=0.126 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhcCeEEEEeccCCC
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDMAYLG 354 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De~Y~~ 354 (583)
.+.++++++.|.++|+.+|.|--..+
T Consensus 83 l~~ld~vV~~a~~~Gi~vIlDlH~~~ 108 (340)
T 3qr3_A 83 ISKYDQLVQGCLSLGAYCIVDIHNYA 108 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCCc
Confidence 56788999999999999999987544
No 433
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=25.95 E-value=1.5e+02 Score=29.48 Aligned_cols=59 Identities=7% Similarity=0.007 Sum_probs=39.9
Q ss_pred ChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCC---HHHHHHHHHHHHhcCe
Q psy14428 268 WNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLS---EDQWRQLAVVVKQRHL 344 (583)
Q Consensus 268 y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s---~~~~~~l~~~a~~~~i 344 (583)
.......++..|++.+.+|+ .-.. + .|.+|.|. ++ .+.++++++.|.++|+
T Consensus 64 ~~~di~~i~~~G~N~vRipi-~w~~--~----------------------~~~~~~~~-~~~~~l~~~~~vv~~a~~~Gi 117 (376)
T 3ayr_A 64 TEDMFKVLIDNQFNVFRIPT-TWSG--H----------------------FGEAPDYK-IDEKWLKRVHEVVDYPYKNGA 117 (376)
T ss_dssp CHHHHHHHHHTTCCEEEECC-CCTT--S----------------------BCCTTTCC-BCHHHHHHHHHHHHHHHTTTC
T ss_pred cHHHHHHHHHcCCCEEEEee-EChh--h----------------------cCCCCCCc-cCHHHHHHHHHHHHHHHHCCC
Confidence 34456667788999999998 2210 0 01223332 33 4678899999999999
Q ss_pred EEEEeccC
Q psy14428 345 YPFFDMAY 352 (583)
Q Consensus 345 ~iI~De~Y 352 (583)
.+|.|--.
T Consensus 118 ~vildlH~ 125 (376)
T 3ayr_A 118 FVILNLHH 125 (376)
T ss_dssp EEEEECCS
T ss_pred EEEEECCC
Confidence 99999665
No 434
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=25.91 E-value=48 Score=32.48 Aligned_cols=66 Identities=8% Similarity=-0.029 Sum_probs=46.2
Q ss_pred cccchhHHHHHHHHHHh-h-cCCCeEEecCCCCcCchhhhhhc---CCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 6 GISGSGSLRVGTAFLER-F-YPGVKTVYFPTPTWNGHVRFCTD---SRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~-~-~~~~~~~~~~~p~w~n~~~~~~~---~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+=|||.|+.++...+.. + -++ .+|.+++|++..+...+.. .|.++...+.- .+..+|.+.+.+.++
T Consensus 66 ~~g~~~a~~~~~~~~~~~~~~~g-d~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~ 136 (382)
T 4hvk_A 66 TSGATEANNLAIIGYAMRNARKG-KHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLR 136 (382)
T ss_dssp ESSHHHHHHHHHHHHHHHHGGGC-CEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCC
T ss_pred ECCchHHHHHHHHHhhhhhcCCC-CEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhc
Confidence 45788999998887652 1 145 6899999999877665444 58887777652 345688887766654
No 435
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=25.48 E-value=40 Score=32.89 Aligned_cols=67 Identities=13% Similarity=0.045 Sum_probs=45.6
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCc-hhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG-HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n-~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
+=+-|||.|+.++...+.+ ++.+.+.++.|+|+. +..+.+..|.++..++.- ....+|.+.+.+.++
T Consensus 60 ~~~~g~t~a~~~~~~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~ 127 (366)
T 1m32_A 60 LLQGSGSYAVEAVLGSALG--PQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCG--EVARPDVQAIDAILN 127 (366)
T ss_dssp EEESCHHHHHHHHHHHSCC--TTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECC--TTSCCCHHHHHHHHH
T ss_pred EEecChHHHHHHHHHHhcC--CCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHh
Confidence 4466899999999887743 554445666788864 566677778888777652 235578777665554
No 436
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=25.30 E-value=3.5e+02 Score=24.90 Aligned_cols=95 Identities=14% Similarity=0.056 Sum_probs=47.3
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEc-CCCChhhH---HHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFP-TPTWNGHV---RFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PE 309 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~-~P~y~~~~---~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~ 309 (583)
..|++++|=.. +...+...|..|++. ...-.... ..++..|.++..+.. |-. |.+.+++.+++. ..
T Consensus 13 VTGas~GIG~a--ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 13 VAGAGRDIGRA--CAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA-DLT----NAAEVEAAISAAADKFG 85 (259)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEEC-CTT----CHHHHHHHHHHHHHHHC
T ss_pred EECCCchHHHH--HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEc-CCC----CHHHHHHHHHHHHHHhC
Confidence 45666666443 333444457777765 43333222 233444666666665 432 555555544322 12
Q ss_pred CcEEEEeCCCCC-CCC--CCCCHHHHHHHHHH
Q psy14428 310 RSILFLQTSSHN-PTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 310 ~~~~i~i~~p~N-PTG--~~~s~~~~~~l~~~ 338 (583)
+..+++.+--.. +.+ ..++.+++++..+.
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHH
Confidence 444554332222 222 25678888877664
No 437
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=25.19 E-value=1.6e+02 Score=27.51 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=49.8
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCC-CCh---hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTP-TWN---GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P-~y~---~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
.+++ ..|++++|=.. +...+...|..|++..- .-. .....++..|.++..+.. |-. |.+.+.+.+++
T Consensus 29 k~vl--VTGas~gIG~a--ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~~----d~~~v~~~~~~ 99 (269)
T 4dmm_A 29 RIAL--VTGASRGIGRA--IALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA-DVS----QESEVEALFAA 99 (269)
T ss_dssp CEEE--ETTCSSHHHHH--HHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC-CTT----SHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHH--HHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEEC-CCC----CHHHHHHHHHH
Confidence 4444 45666666443 33344445878776433 211 222334445777777766 432 55555554432
Q ss_pred C---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHH
Q psy14428 307 M---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 307 ~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~a 339 (583)
. ..+..+++.+--..+.+ ...+.++++++.+.-
T Consensus 100 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN 137 (269)
T 4dmm_A 100 VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLN 137 (269)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 2 12344454332222222 235788888877643
No 438
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.87 E-value=2.2e+02 Score=26.80 Aligned_cols=99 Identities=12% Similarity=0.085 Sum_probs=50.7
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH---HhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
.+++ ..|++++|=.. +...+...|..|++..-.-...... ++..|.++..+.. |-. |.+.+.+.+++.
T Consensus 25 k~~l--VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~ 95 (279)
T 3sju_A 25 QTAF--VTGVSSGIGLA--VARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSC-DVT----STDEVHAAVAAA 95 (279)
T ss_dssp CEEE--EESTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEEC-CTT----CHHHHHHHHHHH
T ss_pred CEEE--EeCCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEC-CCC----CHHHHHHHHHHH
Confidence 4455 55666666443 3334444588887765443333222 3344667777766 432 555555544322
Q ss_pred ---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 308 ---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 308 ---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
..+..+++.+--..+.+ ..++.++++++.+.
T Consensus 96 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 96 VERFGPIGILVNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp HHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 12344454332222222 23678888777664
No 439
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=24.75 E-value=47 Score=33.35 Aligned_cols=50 Identities=14% Similarity=0.134 Sum_probs=38.1
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhh----hcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~----~~~~~~~~~y~~ 56 (583)
+-+-|||.|+.++...+.+ ++ .+|.+++|+|..+...+ +..|.++..++.
T Consensus 83 i~~~sG~~a~~~~l~~~~~--~g-d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 136 (398)
T 2rfv_A 83 LATASGISAITTTLLTLCQ--QG-DHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA 136 (398)
T ss_dssp EEESSHHHHHHHHHHHHCC--TT-CEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred EEECCHHHHHHHHHHHHhC--CC-CEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC
Confidence 3456899999888776633 55 68999999999887766 677888877665
No 440
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=24.72 E-value=37 Score=26.25 Aligned_cols=21 Identities=10% Similarity=0.023 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhcCeEEEEecc
Q psy14428 331 QWRQLAVVVKQRHLYPFFDMA 351 (583)
Q Consensus 331 ~~~~l~~~a~~~~i~iI~De~ 351 (583)
.-++|.++|+++|++|++|..
T Consensus 28 ~A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 28 KALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHHcCCCEEeCHH
Confidence 446788889999999998764
No 441
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=24.59 E-value=1.7e+02 Score=27.52 Aligned_cols=100 Identities=12% Similarity=0.123 Sum_probs=50.1
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCC-------------CCh---hhHHHHhhcCCeEEEEecccCCCCC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTP-------------TWN---GHVRFCTDSRLNVGAYRYFDNKTNG 294 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P-------------~y~---~~~~~~~~~G~~~~~v~~~d~~~~g 294 (583)
.+++ ..|++++|=.. +...+...|..|++.+- .-. .....++..+.++..+.. |-.
T Consensus 12 k~~l--VTGas~GIG~a--~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~~--- 83 (277)
T 3tsc_A 12 RVAF--ITGAARGQGRA--HAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVV-DTR--- 83 (277)
T ss_dssp CEEE--EESTTSHHHHH--HHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CTT---
T ss_pred CEEE--EECCccHHHHH--HHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEC-CCC---
Confidence 4444 45666666443 33344445878876432 111 112233445677777766 432
Q ss_pred CChhhHHHHHHcC---CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHH
Q psy14428 295 LDFAGMMEDIKAM---PERSILFLQTSSHNPTGV--DLSEDQWRQLAVVV 339 (583)
Q Consensus 295 ~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~a 339 (583)
|.+.+.+.+++. ..+..+++.+--..+.+. ..+.+++++..+.-
T Consensus 84 -~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN 132 (277)
T 3tsc_A 84 -DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDIN 132 (277)
T ss_dssp -CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence 555555554331 123445544332222222 46788888877643
No 442
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.58 E-value=3.8e+02 Score=24.34 Aligned_cols=101 Identities=10% Similarity=0.107 Sum_probs=50.0
Q ss_pred CCCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcC-CCC---hhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHH
Q psy14428 229 DNRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPT-PTW---NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDI 304 (583)
Q Consensus 229 ~~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~-P~y---~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l 304 (583)
++..++ ..|++++|=.. +...+...|..|++.. ..- .......+..+.++..+.. |-. |.+.+.+.+
T Consensus 12 ~~k~vl--ITGas~giG~~--ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~ 82 (256)
T 3ezl_A 12 SQRIAY--VTGGMGGIGTS--ICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG-NVG----DWDSTKQAF 82 (256)
T ss_dssp -CEEEE--ETTTTSHHHHH--HHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEEC-CTT----CHHHHHHHH
T ss_pred CCCEEE--EECCCChHHHH--HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEec-CCC----CHHHHHHHH
Confidence 344555 56666666543 3344444577776632 222 2223344455666666665 332 555555444
Q ss_pred HcC---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 305 KAM---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 305 ~~~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++. ..+..+++.+-...+.+ ..++.+++++..+.
T Consensus 83 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~v 121 (256)
T 3ezl_A 83 DKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDT 121 (256)
T ss_dssp HHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 322 23445554332222222 24677888777664
No 443
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=24.53 E-value=83 Score=31.29 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=38.3
Q ss_pred cccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhhhhcCCCceeeeec
Q psy14428 6 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRY 56 (583)
Q Consensus 6 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~~~~~~~~~~~y~~ 56 (583)
.-|||.++.++...+.+..++ ..|.+++|++..+...++..|.++..++.
T Consensus 112 ~~sG~~a~~~~~~~l~~~~~g-d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~ 161 (401)
T 2bwn_A 112 FSSAYNANDATLSTLRVLFPG-LIIYSDSLNHASMIEGIKRNAGPKRIFRH 161 (401)
T ss_dssp ESCHHHHHHHHHHHHHHHSTT-CEEEEETTCCHHHHHHHHHSCCCEEEECT
T ss_pred ECCcHHHHHHHHHHHhcCCCC-CEEEECchhhHHHHHHHHHcCCeEEEEcC
Confidence 357777776666655544466 68999999999988888888998888775
No 444
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=24.46 E-value=2.5e+02 Score=26.28 Aligned_cols=99 Identities=9% Similarity=0.115 Sum_probs=48.9
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC----------------Chh---hHHHHhhcCCeEEEEecccCC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT----------------WNG---HVRFCTDSRLNVGAYRYFDNK 291 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~----------------y~~---~~~~~~~~G~~~~~v~~~d~~ 291 (583)
.+++ ..|++++|=.. +...+...|..|++.+-. -.. ....++..|.++..+.. |-.
T Consensus 12 k~~l--VTGas~gIG~a--ia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~ 86 (286)
T 3uve_A 12 KVAF--VTGAARGQGRS--HAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEV-DVR 86 (286)
T ss_dssp CEEE--EESTTSHHHHH--HHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEEC-CTT
T ss_pred CEEE--EeCCCchHHHH--HHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEc-CCC
Confidence 3444 45666666443 334444458888764322 111 12223345667777766 432
Q ss_pred CCCCChhhHHHHHHcC---CCCcEEEEeCCCCCCCCC---CCCHHHHHHHHHH
Q psy14428 292 TNGLDFAGMMEDIKAM---PERSILFLQTSSHNPTGV---DLSEDQWRQLAVV 338 (583)
Q Consensus 292 ~~g~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~---~~s~~~~~~l~~~ 338 (583)
|.+.+.+.+++. ..+..+++.+--..+.+. .++.+++++..+.
T Consensus 87 ----~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (286)
T 3uve_A 87 ----DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDI 135 (286)
T ss_dssp ----CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHH
Confidence 555555544321 123444443332222222 3578888877764
No 445
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=24.37 E-value=2.2e+02 Score=26.47 Aligned_cols=95 Identities=15% Similarity=0.170 Sum_probs=46.7
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PE 309 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~ 309 (583)
..|++++|=.. +...+...|..|++..-.-....... +..|.++..+.. |-. |.+.+.+.+++. ..
T Consensus 26 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-Dl~----~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 26 VTGGSRGLGFG--IAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC-DVS----NYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC-CTT----CHHHHHHHHHHHHHHHS
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEc-CCC----CHHHHHHHHHHHHHHcC
Confidence 44666666443 33344445778877654433222222 223667766665 432 555555544321 12
Q ss_pred CcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 310 RSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
+..+++.+-...+.+ ..++.++++++.+.
T Consensus 99 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 99 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 344554332222222 23577888777664
No 446
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=24.35 E-value=47 Score=33.11 Aligned_cols=64 Identities=23% Similarity=0.185 Sum_probs=41.6
Q ss_pred ccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhh-h--hhcCC--CceeeeeccCCCCcccchhhhHHHHH
Q psy14428 7 ISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR-F--CTDSR--LNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 7 ~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~-~--~~~~~--~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
-|||.|+.++...+.+ ++ ..|.+++|+++.+.. . .+..| ..+..++. ++.+..+|++.+.+.++
T Consensus 92 ~sGt~a~~~a~~~~~~--~g-d~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~ 160 (405)
T 2vi8_A 92 HSGAQANMAVYFTVLE--HG-DTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGV-DPETHVIDYDDVREKAR 160 (405)
T ss_dssp SSHHHHHHHHHHHHCC--TT-CEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECB-CTTTCSBCHHHHHHHHH
T ss_pred cCcHHHHHHHHHHhcC--CC-CEEEEecccccchhcccchhhhccceeEEEeccc-ccccCCcCHHHHHHHHH
Confidence 4889999988887732 45 679999999987753 1 12223 34444432 34556788887766654
No 447
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.32 E-value=2.7e+02 Score=25.74 Aligned_cols=99 Identities=9% Similarity=0.056 Sum_probs=50.6
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH---HhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
.+++ ..|++++|=.. +...+...|..|++..-.-...... +...|.++..+.. |-. |.+.+.+.++..
T Consensus 30 k~vl--ITGas~gIG~~--la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~ 100 (262)
T 3rkr_A 30 QVAV--VTGASRGIGAA--IARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC-DLS----HSDAIAAFATGV 100 (262)
T ss_dssp CEEE--ESSTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEC-CTT----CHHHHHHHHHHH
T ss_pred CEEE--EECCCChHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEe-cCC----CHHHHHHHHHHH
Confidence 4444 55666666543 3344444588887766554433332 3344667777766 432 555555544321
Q ss_pred ---CCCcEEEEeCCCC-CCCC--CCCCHHHHHHHHHH
Q psy14428 308 ---PERSILFLQTSSH-NPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 308 ---~~~~~~i~i~~p~-NPTG--~~~s~~~~~~l~~~ 338 (583)
..+..+++.+-.. .+.+ ...+.+++++..+.
T Consensus 101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~v 137 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAV 137 (262)
T ss_dssp HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHH
Confidence 1234444433222 2222 23677888777654
No 448
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=23.91 E-value=2.1e+02 Score=27.60 Aligned_cols=100 Identities=13% Similarity=0.027 Sum_probs=50.8
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC----------C---hhhHHHHhhcCCeEEEEecccCCCCCCCh
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT----------W---NGHVRFCTDSRLNVGAYRYFDNKTNGLDF 297 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~----------y---~~~~~~~~~~G~~~~~v~~~d~~~~g~d~ 297 (583)
.+++ ..|++++|=.. +...+...|..|++.+-. - ......++..|.++..+.. |-. |.
T Consensus 28 k~vl--VTGas~GIG~a--ia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----d~ 98 (322)
T 3qlj_A 28 RVVI--VTGAGGGIGRA--HALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGS-NVA----DW 98 (322)
T ss_dssp CEEE--ETTTTSHHHHH--HHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECC-CTT----SH
T ss_pred CEEE--EECCCcHHHHH--HHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEEC-CCC----CH
Confidence 4445 55666666543 334444458888775422 1 1223334455777777766 432 55
Q ss_pred hhHHHHHHcC---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHH
Q psy14428 298 AGMMEDIKAM---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 298 ~~l~~~l~~~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~a 339 (583)
+.+.+.+++. ..+..+++.+--..+.+ ..++.++++++.+.-
T Consensus 99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN 145 (322)
T 3qlj_A 99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVH 145 (322)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence 5555544322 12344444332222222 236788888777643
No 449
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=23.71 E-value=1.9e+02 Score=27.77 Aligned_cols=60 Identities=13% Similarity=0.027 Sum_probs=42.4
Q ss_pred CCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q psy14428 257 GVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLA 336 (583)
Q Consensus 257 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~ 336 (583)
++..+++..|.|..+. +.+|++++.+.- .. +|.-.|..++.+|+
T Consensus 178 ~~~~~v~~H~af~Yf~---~~yGl~~~~~~~--~~-------------------------------~~~eps~~~l~~l~ 221 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLA---KRFGLKQLGISG--IS-------------------------------PEQEPSPRQLKEIQ 221 (286)
T ss_dssp SCCEEEEEESCCHHHH---HHTTCEEEEEEC--SC-------------------------------C---CCHHHHHHHH
T ss_pred CCCEEEEECCchHHHH---HHCCCeEeeccc--cC-------------------------------CCCCCCHHHHHHHH
Confidence 3788999999888665 778988776532 10 34456788888999
Q ss_pred HHHHhcCeEEEEeccC
Q psy14428 337 VVVKQRHLYPFFDMAY 352 (583)
Q Consensus 337 ~~a~~~~i~iI~De~Y 352 (583)
+.++++++-.|.-|..
T Consensus 222 ~~ik~~~v~~if~e~~ 237 (286)
T 3gi1_A 222 DFVKEYNVKTIFAEDN 237 (286)
T ss_dssp HHHHHTTCCEEEECTT
T ss_pred HHHHHcCCCEEEEeCC
Confidence 9998888877776653
No 450
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=23.50 E-value=4.5e+02 Score=24.45 Aligned_cols=95 Identities=9% Similarity=0.095 Sum_probs=48.0
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~ 310 (583)
..|+++++=.. +...+...|..|++..-.-..... .++..|.++..+.. |-. |.+.+.+.+++. ..+
T Consensus 49 ITGasggIG~~--la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dl~----d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 49 VTGAGRGIGRE--IAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG-DVS----KKEEISEVINKILTEHKN 121 (285)
T ss_dssp EESTTSHHHHH--HHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEEC-CTT----CHHHHHHHHHHHHHHCSC
T ss_pred EECCCcHHHHH--HHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEEC-CCC----CHHHHHHHHHHHHHhcCC
Confidence 44677776554 445566668888774322222222 23334666766666 432 555655554321 223
Q ss_pred cEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 311 SILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 311 ~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
..+++.+-...+.+ ...+.+++++..+.
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRT 151 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 44554332222222 23577777776654
No 451
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=23.33 E-value=56 Score=34.78 Aligned_cols=65 Identities=11% Similarity=0.019 Sum_probs=41.9
Q ss_pred eecccchhHHHHHHHHHH-h-hc-CCCeEEecCCCCcCchhhhhhcC--CCceeeeeccCCCCcccchhhh
Q psy14428 4 VQGISGSGSLRVGTAFLE-R-FY-PGVKTVYFPTPTWNGHVRFCTDS--RLNVGAYRYFDNKTNGLDFAGM 69 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~-~-~~-~~~~~~~~~~p~w~n~~~~~~~~--~~~~~~y~~~~~~~~~~d~~~~ 69 (583)
+-|-++|.||.+....|. + +. ++ .+|.+++|+|..+....... |.++..++.-....-.+|++.+
T Consensus 169 ~~t~G~~eal~~~~~~l~~~~l~~~G-d~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 238 (546)
T 2zy4_A 169 FAVEGGTAAMAYIFESLKLNGLLKAG-DKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSEL 238 (546)
T ss_dssp EEEEHHHHHHHHHHHHHHHTTSSCTT-CEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHH
T ss_pred EEECCHHHHHHHHHHHhhhhhcCCCC-CEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHH
Confidence 446678888988877652 2 33 44 68999999999999875444 5666666542221123666554
No 452
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=23.27 E-value=1.9e+02 Score=26.97 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=71.8
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCC
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPE 309 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~ 309 (583)
.++.+ ..|++.+|=.. +...|...|-.|++.+-.-.. .-+..+.++..+.. |-. |.+.+++.+++..
T Consensus 11 GK~al--VTGas~GIG~a--ia~~la~~Ga~Vv~~~~~~~~---~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~g- 77 (242)
T 4b79_A 11 GQQVL--VTGGSSGIGAA--IAMQFAELGAEVVALGLDADG---VHAPRHPRIRREEL-DIT----DSQRLQRLFEALP- 77 (242)
T ss_dssp TCEEE--EETTTSHHHHH--HHHHHHHTTCEEEEEESSTTS---TTSCCCTTEEEEEC-CTT----CHHHHHHHHHHCS-
T ss_pred CCEEE--EeCCCCHHHHH--HHHHHHHCCCEEEEEeCCHHH---HhhhhcCCeEEEEe-cCC----CHHHHHHHHHhcC-
Confidence 35556 56777777554 344455558888876533221 11234556666666 432 6677777776653
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHhcCcEEEEecCcccccc
Q psy14428 310 RSILFLQTSSHNPTGVDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKEVGQLCLAQSFSKNMGL 389 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~l 389 (583)
+..+++.|---++....++.++|++++++--+ +.+.+ ....+..+.+..+++|.+.|.+=..+.
T Consensus 78 ~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~-g~~~~---------------~~~~~p~m~~~~G~IVnisS~~~~~~~ 141 (242)
T 4b79_A 78 RLDVLVNNAGISRDREEYDLATFERVLRLNLS-AAMLA---------------SQLARPLLAQRGGSILNIASMYSTFGS 141 (242)
T ss_dssp CCSEEEECCCCCCGGGGGSHHHHHHHHHHHTH-HHHHH---------------HHHHHHHHHHHCEEEEEECCGGGTSCC
T ss_pred CCCEEEECCCCCCCcccCCHHHHHHHHHHhhH-HHHHH---------------HHHHHHHHHHcCCeEEEEeeccccCCC
Confidence 34444433222333456788899888875432 11100 001122223446789999988765554
Q ss_pred cC
Q psy14428 390 YG 391 (583)
Q Consensus 390 ~G 391 (583)
++
T Consensus 142 ~~ 143 (242)
T 4b79_A 142 AD 143 (242)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 453
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=23.08 E-value=3e+02 Score=25.32 Aligned_cols=100 Identities=17% Similarity=0.173 Sum_probs=50.9
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH---hhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC---TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
.+++ ..|++++|=.. +...+...|..|++.+-.-....... +..+.++..+.. |-. |.+.+.+.+++.
T Consensus 7 k~vl--VTGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~ 77 (257)
T 3imf_A 7 KVVI--ITGGSSGMGKG--MATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM-DVR----NTDDIQKMIEQI 77 (257)
T ss_dssp CEEE--ETTTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEEC-CTT----CHHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEc-cCC----CHHHHHHHHHHH
Confidence 3444 55666666443 33444445888877654433333332 334566766666 432 555555544322
Q ss_pred ---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHH
Q psy14428 308 ---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 308 ---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~a 339 (583)
..+..+++.+--..+.+ ..++.+++++..+.-
T Consensus 78 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n 114 (257)
T 3imf_A 78 DEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIV 114 (257)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 12344454332222222 246788888877654
No 454
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=23.07 E-value=2.9e+02 Score=25.39 Aligned_cols=95 Identities=11% Similarity=-0.047 Sum_probs=46.4
Q ss_pred cCCchhHHHHHHHHHHHhCC---CCCEEEEcCCCChhhHHHHhhc-----CCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 237 GISGSGSLRVGTAFLERFYP---GVKTVYFPTPTWNGHVRFCTDS-----RLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~-----G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
..|++++|=.. +...+.. .|..|++..-.-.......+.. |.++..+.. |-. |.+.+.+.++...
T Consensus 11 VTGas~gIG~~--ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 11 LTGASRGFGRA--LAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA-DLG----TEAGVQRLLSAVR 83 (259)
T ss_dssp ESSCSSHHHHH--HHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEEC-CTT----SHHHHHHHHHHHH
T ss_pred EeCCCChHHHH--HHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEec-CCC----CHHHHHHHHHHHH
Confidence 45666676543 3344444 5888877654433333332222 666776766 432 5555554443221
Q ss_pred -----CCcE-EEEeCCCCC--CC-CCC---CCHHHHHHHHHH
Q psy14428 309 -----ERSI-LFLQTSSHN--PT-GVD---LSEDQWRQLAVV 338 (583)
Q Consensus 309 -----~~~~-~i~i~~p~N--PT-G~~---~s~~~~~~l~~~ 338 (583)
.+.. .++++|..- +. +.. .+.+++++..+.
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 1122 244444432 11 111 577888877764
No 455
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.04 E-value=2.4e+02 Score=26.13 Aligned_cols=96 Identities=10% Similarity=-0.015 Sum_probs=48.8
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH---HhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~ 310 (583)
..|++++|=.. +...+...|..|++..-.-...... ++..|.++..+.. |-. |.+.+.+.+++. ..+
T Consensus 16 VTGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 16 ISGVGPALGTT--LARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT-DIT----DDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp EESCCTTHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTT----CHHHHHHHHHHHHHHTSC
T ss_pred EECCCcHHHHH--HHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEc-CCC----CHHHHHHHHHHHHHHcCC
Confidence 45566665433 3333444588887766543333332 3344667777766 432 555555444321 234
Q ss_pred cEEEEeCCCC-CCCC--CCCCHHHHHHHHHHH
Q psy14428 311 SILFLQTSSH-NPTG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 311 ~~~i~i~~p~-NPTG--~~~s~~~~~~l~~~a 339 (583)
..+++.+-.. .+.+ ...+.+++++..+.-
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N 120 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELT 120 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHH
Confidence 4445433212 1222 246778888877643
No 456
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=22.87 E-value=3.3e+02 Score=25.38 Aligned_cols=95 Identities=8% Similarity=0.033 Sum_probs=48.0
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCC------------C---hhhHHHHhhcCCeEEEEecccCCCCCCChhhHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPT------------W---NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~------------y---~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~ 301 (583)
..|++++|=.. +...+...|..|++.+-. - ......++..|.++..+.. |-. |.+.+.
T Consensus 15 VTGas~gIG~a--~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~ 87 (281)
T 3s55_A 15 ITGGARGMGRS--HAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKV-DVK----DRAALE 87 (281)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CTT----CHHHHH
T ss_pred EeCCCchHHHH--HHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeC-CCC----CHHHHH
Confidence 45666666443 334444458777765432 0 1112233455777777766 432 555555
Q ss_pred HHHHcC---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 302 EDIKAM---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 302 ~~l~~~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
+.+++. ..+..+++.+--..+.+ ..++.+++++..+.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGT 129 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 544322 12344554332222222 34678888877664
No 457
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=22.85 E-value=3.3e+02 Score=25.48 Aligned_cols=101 Identities=12% Similarity=0.001 Sum_probs=48.7
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChh---hHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG---HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM 307 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~---~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~ 307 (583)
++++ ..|++++|=.. +...+...|..|++.+-.-.. ....++..|.++..+.. |-.+ .-+.+.+.+.+.+.
T Consensus 34 k~~l--VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~-~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 34 RTAL--VTGSSRGIGAA--IAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAG-DLSE-AGAGTDLIERAEAI 107 (275)
T ss_dssp CEEE--ETTCSSHHHHH--HHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEEC-CTTS-TTHHHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHH--HHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEe-cCCC-HHHHHHHHHHHHHh
Confidence 4444 45666666443 333444457788765433222 23333445667776666 4321 11233333333332
Q ss_pred CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 308 PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 308 ~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
.+..+++.+--..+.+ ...+.+++++..+.
T Consensus 108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (275)
T 4imr_A 108 -APVDILVINASAQINATLSALTPNDLAFQLAV 139 (275)
T ss_dssp -SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3444554433222222 23578888877664
No 458
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=22.81 E-value=1.9e+02 Score=27.18 Aligned_cols=62 Identities=11% Similarity=0.021 Sum_probs=36.8
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 305 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~ 305 (583)
..|++++|=.. +...+...|..|++.+-.-.......+..+.++..+.. |-. |.+.+.+.++
T Consensus 10 VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~ 71 (281)
T 3zv4_A 10 ITGGASGLGRA--LVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVG-DVR----SLQDQKRAAE 71 (281)
T ss_dssp EETCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEEC-CTT----CHHHHHHHHH
T ss_pred EECCCcHHHHH--HHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEc-CCC----CHHHHHHHHH
Confidence 45666666543 33444455888888776655555566666777777766 432 5555544443
No 459
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=22.76 E-value=3.5e+02 Score=24.93 Aligned_cols=99 Identities=11% Similarity=0.087 Sum_probs=51.1
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEc-CCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFP-TPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~-~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
.+++ ..|++++|=.. +...+...|..|++. .-.-..... .++..|.++..+.. |-. |.+.+.+.+++
T Consensus 5 k~vl--VTGas~gIG~a--ia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~ 75 (258)
T 3oid_A 5 KCAL--VTGSSRGVGKA--AAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA-NVG----QPAKIKEMFQQ 75 (258)
T ss_dssp CEEE--ESSCSSHHHHH--HHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEEC-CTT----CHHHHHHHHHH
T ss_pred CEEE--EecCCchHHHH--HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEc-CCC----CHHHHHHHHHH
Confidence 4455 56676776543 334444458777764 443332222 33445667777766 432 55555554433
Q ss_pred C---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 307 M---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 307 ~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
. ..+..+++.+--..+.+ ..++.+++++..+.
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 2 12344554433222222 24678888777664
No 460
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=22.67 E-value=2.3e+02 Score=26.06 Aligned_cols=95 Identities=6% Similarity=-0.102 Sum_probs=45.9
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~~~~ 313 (583)
..|+++++=.. +...+...|..|++..-.-.......+..|.++..+.. |-. |.+.+.+.+++. ..+..+
T Consensus 10 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 10 ITGGARGLGAE--AARQAVAAGARVVLADVLDEEGAATARELGDAARYQHL-DVT----IEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEEC-CTT----CHHHHHHHHHHHHHHHSCCCE
T ss_pred EECCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEe-cCC----CHHHHHHHHHHHHHHcCCCCE
Confidence 44666666443 33334445777776544333333344444555665655 432 555555544321 123444
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
++.+-...+.+ ...+.+++++..+.
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEI 109 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 54332222222 13577777777654
No 461
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.54 E-value=3.3e+02 Score=24.99 Aligned_cols=95 Identities=7% Similarity=0.049 Sum_probs=46.0
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChh-hHHHHhh---c-CCeEEEEecccCCCCCCChhhHHHHHHcC---C
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNG-HVRFCTD---S-RLNVGAYRYFDNKTNGLDFAGMMEDIKAM---P 308 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~---~-G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~ 308 (583)
..|++++|=.. +...+...|..|++..-.-.. .....+. . |.++..+.. |-. |.+.+.+.+++. .
T Consensus 9 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 9 VTGSTSGIGLG--IATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA-DLS----KGEAVRGLVDNAVRQM 81 (260)
T ss_dssp ETTCSSHHHHH--HHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECC-CTT----SHHHHHHHHHHHHHHH
T ss_pred EeCCCcHHHHH--HHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEEC-CCC----CHHHHHHHHHHHHHhc
Confidence 45666666443 333444458788776544333 3222222 1 666666655 432 555555544321 1
Q ss_pred CCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 309 ERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
.+..+++.+-...+.+ ...+.+++++..+.
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILAL 113 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 2344444332222222 23577888777664
No 462
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=22.44 E-value=44 Score=33.40 Aligned_cols=46 Identities=20% Similarity=0.059 Sum_probs=34.3
Q ss_pred hhcccccchhhhHHHHHHHhCCCCcEEEeCCCCCCChHh---HhhhcCCccccc
Q psy14428 78 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAY 128 (583)
Q Consensus 78 ~q~~~gtgal~~~~~~~~~~~~~~~~~~i~~ptw~nh~~---if~~~g~~~~~y 128 (583)
+-|.|||.|+.++...+ |+ ..|.+++|+|+.|.. ..+..|.++..+
T Consensus 80 ~~~~ggt~a~~~~~~~~----~g-d~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v 128 (374)
T 2aeu_A 80 VGFNRTSSAILATILAL----KP-KKVIHYLPELPGHPSIERSCKIVNAKYFES 128 (374)
T ss_dssp EEESSHHHHHHHHHHHH----CC-SEEEEECSSSSCCTHHHHHHHHTTCEEEEE
T ss_pred EEEcChHHHHHHHHHhC----CC-CEEEEecCCCCccHHHHHHHHHcCcEEEEe
Confidence 45679999998887765 65 789999999999876 344557666544
No 463
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=22.27 E-value=1.8e+02 Score=31.97 Aligned_cols=34 Identities=0% Similarity=0.027 Sum_probs=22.6
Q ss_pred CCCCCCCCCeEEEecCCchhHHHHHHHHHHHhCCCC
Q psy14428 223 DFPAFKDNRLAIVQGISGSGSLRVGTAFLERFYPGV 258 (583)
Q Consensus 223 ~g~~~~~~~I~i~~t~G~~~al~l~~~~l~~~~~~g 258 (583)
|.+.++++.|.| +.....++....+.|..+...+
T Consensus 81 Y~L~i~~~~i~I--~a~~~~G~fyg~qTL~Qll~~~ 114 (716)
T 2cho_A 81 YYLSVNEKEIVL--AGNDERGTYYALQTFAQLLKDG 114 (716)
T ss_dssp EEEEECSSEEEE--EESSHHHHHHHHHHHHHHCBTT
T ss_pred eEEEEeCCEEEE--EEcCHHHHHHHHHHHHHHhhcC
Confidence 345677788888 7777666666656666666533
No 464
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=22.26 E-value=63 Score=30.65 Aligned_cols=79 Identities=10% Similarity=0.047 Sum_probs=0.0
Q ss_pred EEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q psy14428 260 TVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMPERSILFLQTSSHNPTGVDLSEDQWRQLAVVV 339 (583)
Q Consensus 260 ~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~a 339 (583)
.|+++...|.+....++.....+ .+|+ -..++.+|.-.+.++. .-+..++++ -...++.++++++++.|
T Consensus 78 sVlTd~~~F~gs~~dL~~ir~~v-~lPv-LrKDfi~~~~qi~ea~---~~GAD~ilL------i~a~l~~~~l~~l~~~a 146 (251)
T 1i4n_A 78 SILTEKHYFKGDPAFVRAARNLT-CRPI-LAKDFYIDTVQVKLAS---SVGADAILI------IARILTAEQIKEIYEAA 146 (251)
T ss_dssp EEECCCSSSCCCTHHHHHHHTTC-CSCE-EEECCCCSTHHHHHHH---HTTCSEEEE------EGGGSCHHHHHHHHHHH
T ss_pred EEEecccccCCCHHHHHHHHHhC-CCCE-EEeeCCCCHHHHHHHH---HcCCCEEEE------ecccCCHHHHHHHHHHH
Q ss_pred HhcCeEEEEe
Q psy14428 340 KQRHLYPFFD 349 (583)
Q Consensus 340 ~~~~i~iI~D 349 (583)
++.|+-++.|
T Consensus 147 ~~lGl~~lvE 156 (251)
T 1i4n_A 147 EELGMDSLVE 156 (251)
T ss_dssp HTTTCEEEEE
T ss_pred HHcCCeEEEE
No 465
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=22.21 E-value=1.5e+02 Score=27.96 Aligned_cols=95 Identities=6% Similarity=-0.059 Sum_probs=48.1
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~ 310 (583)
..|++++|=.. +...+...|..|++..-.-..... .++..|.++..+.. |-. |.+.+.+.+++. ..+
T Consensus 37 VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dl~----d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 37 ITGASTGIGKK--VALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC-DVT----QPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp EESTTSHHHHH--HHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEEC-CTT----CHHHHHHHHHHHHHHHSC
T ss_pred EeCCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEc-CCC----CHHHHHHHHHHHHHHcCC
Confidence 45666666443 334444458788776544333332 33445666666665 432 555555544322 123
Q ss_pred cEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 311 SILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 311 ~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
..+++.+--..+.+ ...+.++++++.+.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 110 IDIAVCNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44554332222222 23578888877664
No 466
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=21.99 E-value=3.3e+02 Score=26.11 Aligned_cols=99 Identities=13% Similarity=0.175 Sum_probs=49.9
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC-------C-----h---hhHHHHhhcCCeEEEEecccCCCCCC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT-------W-----N---GHVRFCTDSRLNVGAYRYFDNKTNGL 295 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~-------y-----~---~~~~~~~~~G~~~~~v~~~d~~~~g~ 295 (583)
.+++ ..|++++|=.. +...|...|..|++.+-. + . .....++..|.++..+.. |-.
T Consensus 47 k~~l--VTGas~GIG~a--ia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~---- 117 (317)
T 3oec_A 47 KVAF--ITGAARGQGRT--HAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQA-DVR---- 117 (317)
T ss_dssp CEEE--ESSCSSHHHHH--HHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CTT----
T ss_pred CEEE--EeCCCcHHHHH--HHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEEC-CCC----
Confidence 4455 55666666543 333444458787764321 1 1 112233445777777766 432
Q ss_pred ChhhHHHHHHcC---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 296 DFAGMMEDIKAM---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 296 d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
|.+.+.+.+++. ..+..+++.+--..+.+ ..++.++++++++.
T Consensus 118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~v 165 (317)
T 3oec_A 118 DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQT 165 (317)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 555555544322 12344454332222222 35678888887764
No 467
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=21.93 E-value=3.6e+02 Score=25.25 Aligned_cols=96 Identities=7% Similarity=0.017 Sum_probs=47.3
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCCh-hhHHHH---hh-cCCeEEEEecccCCCCCCChhhHHHHHHcC---C
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWN-GHVRFC---TD-SRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---P 308 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~-~~~~~~---~~-~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~ 308 (583)
..|++++|=.. +...+...|..|++..-.-. ...... +. .+.++..+.. |-. |.+.+.+.+++. .
T Consensus 30 VTGas~GIG~~--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 30 ITGSTSGIGLA--IARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA-DMT----KPSEIADMMAMVADRF 102 (281)
T ss_dssp EETCSSHHHHH--HHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECC-CTT----CHHHHHHHHHHHHHHT
T ss_pred EeCCCcHHHHH--HHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeC-CCC----CHHHHHHHHHHHHHHC
Confidence 45666666443 33444445888877654322 222222 22 2556666665 432 555555544321 2
Q ss_pred CCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHH
Q psy14428 309 ERSILFLQTSSHNPTGV--DLSEDQWRQLAVVV 339 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~a 339 (583)
.+..+++.+-...+.+. .++.++++++.+.-
T Consensus 103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN 135 (281)
T 3v2h_A 103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVN 135 (281)
T ss_dssp SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 24445544333223332 35788888777643
No 468
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=21.80 E-value=3.4e+02 Score=27.54 Aligned_cols=20 Identities=5% Similarity=-0.246 Sum_probs=14.2
Q ss_pred cCcEEEEecCcccccccCcc
Q psy14428 374 VGQLCLAQSFSKNMGLYGER 393 (583)
Q Consensus 374 ~~~vi~i~S~SK~~~l~GlR 393 (583)
.+++|.+.|.+-..+.|+.+
T Consensus 223 gG~IVniSSi~~~~~~p~~~ 242 (405)
T 3zu3_A 223 GAQTTAFTYLGEKITHDIYW 242 (405)
T ss_dssp EEEEEEEECCCCGGGTTTTT
T ss_pred CcEEEEEeCchhhCcCCCcc
Confidence 46788898887766656643
No 469
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=21.80 E-value=3e+02 Score=25.60 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=46.1
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCC------------Chh---hHHHHhhcCCeEEEEecccCCCCCCChhhHH
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPT------------WNG---HVRFCTDSRLNVGAYRYFDNKTNGLDFAGMM 301 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~------------y~~---~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~ 301 (583)
..|++++|=.. +...|...|..|++.+-. -.. ....++..|.++..+.. |-. |.+.+.
T Consensus 18 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~ 90 (278)
T 3sx2_A 18 ITGAARGQGRA--HAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQA-DVR----DRESLS 90 (278)
T ss_dssp EESTTSHHHHH--HHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEEC-CTT----CHHHHH
T ss_pred EECCCChHHHH--HHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeC-CCC----CHHHHH
Confidence 45666666443 333444458777765322 111 12223445677777776 432 555555
Q ss_pred HHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q psy14428 302 EDIKAM---PERSILFLQTSSHNPTGVDLSEDQWRQLAVV 338 (583)
Q Consensus 302 ~~l~~~---~~~~~~i~i~~p~NPTG~~~s~~~~~~l~~~ 338 (583)
+.+++. ..+..+++.+--..+.+. +.+++++..+.
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~ 128 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDV 128 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHH
Confidence 555322 124445554333333322 57777777654
No 470
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=21.73 E-value=3.1e+02 Score=24.99 Aligned_cols=95 Identities=11% Similarity=0.067 Sum_probs=46.4
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH---HhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~ 310 (583)
..|++++|=.. +...+...|..|++..-.-...... ++..|.++..+.. |-. |.+.+.+.+++. ..+
T Consensus 12 VTGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv~----~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 12 ITGASSGIGEA--TARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL-DVA----DRQGVDAAVASTVEALGG 84 (247)
T ss_dssp EESCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTT----CHHHHHHHHHHHHHHHSC
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEC-CCC----CHHHHHHHHHHHHHHcCC
Confidence 44666666443 3334444477777654332222222 2233666666666 432 555555544321 123
Q ss_pred cEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 311 SILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 311 ~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
..+++.+-...+.+ ..++.++++++.+.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMIDT 114 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 44554433222222 23577888777664
No 471
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.72 E-value=2.3e+02 Score=25.58 Aligned_cols=95 Identities=9% Similarity=0.022 Sum_probs=48.7
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHH----hhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFC----TDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PE 309 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~ 309 (583)
..|+++++=.. +...+...|..|++..-.-....... +..|.++..+.. |-. |.+.+.+.+++. ..
T Consensus 7 ITGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 7 ITGASRGIGEA--IARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHL-DVS----KAESVEEFSKKVLERFG 79 (235)
T ss_dssp EESCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC-CTT----CHHHHHHHCC-HHHHHS
T ss_pred EECCCcHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEe-ccC----CHHHHHHHHHHHHHhcC
Confidence 44666665443 33444445778877665543333322 244677777766 432 556655544221 12
Q ss_pred CcEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q psy14428 310 RSILFLQTSSHNPTGV--DLSEDQWRQLAVV 338 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~ 338 (583)
+..+++.+-...+.+. ..+.+++++..+.
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHH
Confidence 3445544333333332 3578888877664
No 472
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=21.70 E-value=2.5e+02 Score=26.73 Aligned_cols=95 Identities=8% Similarity=0.101 Sum_probs=48.8
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH---HhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~ 310 (583)
..|++++|=.. +...+...|..|++..-.-...... ++..|.++..+.. |-. |.+.+.+.+++. ..+
T Consensus 36 VTGas~gIG~~--la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 36 VTGGASGIGLA--TATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC-DVR----HLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTT----CHHHHHHHHHHHHHHHSS
T ss_pred EeCCCCHHHHH--HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEc-cCC----CHHHHHHHHHHHHHhCCC
Confidence 45666666543 3344444588887765544333333 3334667777766 432 555555554322 123
Q ss_pred cEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q psy14428 311 SILFLQTSSHNPTGV--DLSEDQWRQLAVV 338 (583)
Q Consensus 311 ~~~i~i~~p~NPTG~--~~s~~~~~~l~~~ 338 (583)
..+++.+---.+.+. ..+.++++++.+.
T Consensus 109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 138 (301)
T 3tjr_A 109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDI 138 (301)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 444443322222222 4677888777664
No 473
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=21.27 E-value=3e+02 Score=26.62 Aligned_cols=26 Identities=8% Similarity=-0.052 Sum_probs=20.1
Q ss_pred CCCEEEEcCCCChhhHHHHhhcCCeEEEE
Q psy14428 257 GVKTVYFPTPTWNGHVRFCTDSRLNVGAY 285 (583)
Q Consensus 257 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 285 (583)
++..+++..|.|..+. +.+|++.+.+
T Consensus 189 ~~~~~v~~H~af~Yfa---~~yGl~~~~~ 214 (312)
T 2o1e_A 189 EKKEFITQHTAFGYLA---KEYGLKQVPI 214 (312)
T ss_dssp SCCEEEESSCTTHHHH---HHTTCEEEEC
T ss_pred CCCEEEEECCchHHHH---HHCCCeEEEe
Confidence 3788999999887664 7789887654
No 474
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=20.80 E-value=3.6e+02 Score=25.40 Aligned_cols=96 Identities=5% Similarity=0.049 Sum_probs=48.5
Q ss_pred cCCchhHHHHHHHHHHHhCCCCC---EEEEcCCCChhhHHHHhh-----cCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVK---TVYFPTPTWNGHVRFCTD-----SRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd---~Vlv~~P~y~~~~~~~~~-----~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
..|++++|=.. +...+...|. .|++..-.-.......+. .|.++..+.. |-. |.+.+.+.+++..
T Consensus 38 VTGas~GIG~a--ia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~ 110 (287)
T 3rku_A 38 ITGASAGIGKA--TALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQL-DIT----QAEKIKPFIENLP 110 (287)
T ss_dssp EESTTSHHHHH--HHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEEC-CTT----CGGGHHHHHHTSC
T ss_pred EecCCChHHHH--HHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEEC-CCC----CHHHHHHHHHHHH
Confidence 45666666443 2223322243 676665443333333322 1667777776 432 6667777666542
Q ss_pred ---CCcEEEEeCCCCCC-CC--CCCCHHHHHHHHHHH
Q psy14428 309 ---ERSILFLQTSSHNP-TG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 309 ---~~~~~i~i~~p~NP-TG--~~~s~~~~~~l~~~a 339 (583)
.+..+++.+--... .+ ..++.++++++.+.-
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN 147 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTN 147 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHH
Confidence 23444443322121 22 245888888877653
No 475
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=20.51 E-value=3.3e+02 Score=25.41 Aligned_cols=95 Identities=8% Similarity=0.124 Sum_probs=45.2
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHH---HHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVR---FCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~ 310 (583)
..|++++|=.. +...+...|..|++..-.-..... .++..|.++..+.. |-. |.+.+.+.+++. ..+
T Consensus 27 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 27 VTGATSGIGLE--IARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC-DVR----SVPEIEALVAAVVERYGP 99 (277)
T ss_dssp EETCSSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTT----CHHHHHHHHHHHHHHTCS
T ss_pred EECCCCHHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEC-CCC----CHHHHHHHHHHHHHHhCC
Confidence 44666666443 333344447777765433222222 22333666666665 432 555555544321 223
Q ss_pred cEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 311 SILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 311 ~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
..+++.+-...+.+ ..++.++++++.+.
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 129 (277)
T 2rhc_B 100 VDVLVNNAGRPGGGATAELADELWLDVVET 129 (277)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 44454332222222 23577777777654
No 476
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=20.49 E-value=3.3e+02 Score=25.31 Aligned_cols=95 Identities=9% Similarity=-0.020 Sum_probs=48.0
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCC----------hhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHc
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTW----------NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKA 306 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y----------~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~ 306 (583)
..|++++|=.. +...+...|.+|++..-.- ......++..|.++..+.. |-. |.+.+.+.+++
T Consensus 11 VTGas~GIG~a--ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~ 83 (274)
T 3e03_A 11 ITGASRGIGLA--IALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKC-DIR----EEDQVRAAVAA 83 (274)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEEC-CTT----CHHHHHHHHHH
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeC-CCC----CHHHHHHHHHH
Confidence 45666666543 3334444577777654332 1223334455778877776 432 55555544432
Q ss_pred C---CCCcEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 307 M---PERSILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 307 ~---~~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
. ..+..+++.+--..+.+ ...+.++++++.+.
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~v 120 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQV 120 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhH
Confidence 2 12344454332222222 23677888777653
No 477
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=20.44 E-value=3.7e+02 Score=24.54 Aligned_cols=95 Identities=6% Similarity=-0.017 Sum_probs=45.9
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHH---HhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CCC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF---CTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PER 310 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~~ 310 (583)
..|+++++=.. +...+...|..|++..-.-...... ++..|.++..++. |-. |.+.+.+.+++. ..+
T Consensus 7 VTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~~----~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 7 VTGAGQGIGKA--IALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKV-DVS----DRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CTT----SHHHHHHHHHHHHHHTTC
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEe-cCC----CHHHHHHHHHHHHHHhCC
Confidence 44666665443 3333444477777654332222222 2333666666665 432 555555544321 224
Q ss_pred cEEEEeCCCCCCCC--CCCCHHHHHHHHHH
Q psy14428 311 SILFLQTSSHNPTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 311 ~~~i~i~~p~NPTG--~~~s~~~~~~l~~~ 338 (583)
..+++.+--..+.+ ..++.++++++.+.
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNI 109 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 44554433222222 23577888777664
No 478
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=20.42 E-value=50 Score=26.12 Aligned_cols=22 Identities=5% Similarity=-0.088 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhcCeEEEEec
Q psy14428 329 EDQWRQLAVVVKQRHLYPFFDM 350 (583)
Q Consensus 329 ~~~~~~l~~~a~~~~i~iI~De 350 (583)
.+.-++|.++|+++|++|++|.
T Consensus 26 ~~~A~~I~e~A~e~gVPi~e~~ 47 (93)
T 2vt1_B 26 NQCALAVRKYANEVGIPTVRDV 47 (93)
T ss_dssp HHHHHHHHHHHHHTTCCEEECH
T ss_pred cHHHHHHHHHHHHcCCCEEECH
Confidence 3455788999999999999875
No 479
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=20.23 E-value=3.8e+02 Score=24.43 Aligned_cols=94 Identities=11% Similarity=0.079 Sum_probs=48.3
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEcCCCChhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC---CCcEE
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP---ERSIL 313 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~---~~~~~ 313 (583)
..|++++|=.. +...+...|..|++..-.-.......+..+.++..++. |-. |.+.+.+.+++.. .+..+
T Consensus 5 VTGas~gIG~a--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv~----~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 5 VTGATAGFGEC--ITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQL-DVR----NRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp ETTTTSTTHHH--HHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-CTT----CHHHHHHHHHTSCTTTCCCCE
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEc-CCC----CHHHHHHHHHHHHHhCCCCCE
Confidence 34565555432 33334444778877544333333444444445666665 432 6677777776542 23444
Q ss_pred EEeCCCCC--CCC--CCCCHHHHHHHHHH
Q psy14428 314 FLQTSSHN--PTG--VDLSEDQWRQLAVV 338 (583)
Q Consensus 314 i~i~~p~N--PTG--~~~s~~~~~~l~~~ 338 (583)
++ +|..- +.+ ...+.+++++..+.
T Consensus 78 lv-nnAg~~~~~~~~~~~~~~~~~~~~~~ 105 (248)
T 3asu_A 78 LV-NNAGLALGMEPAHKASVEDWETMIDT 105 (248)
T ss_dssp EE-ECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EE-ECCCcCCCCCchhhCCHHHHHHHHHH
Confidence 44 33321 111 24577888777664
No 480
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=20.21 E-value=56 Score=33.09 Aligned_cols=90 Identities=7% Similarity=-0.005 Sum_probs=52.5
Q ss_pred EecCCCCcCchhhhhhcCC--Cc----eeeeeccCCCCcccchhhhHHHH-----Hhhhhh---cccccchhhhHHHHHH
Q psy14428 30 VYFPTPTWNGHVRFCTDSR--LN----VGAYRYFDNKTNGLDFAGMMEDI-----KLAIVQ---GISGSGSLRVGTAFLE 95 (583)
Q Consensus 30 ~~~~~p~w~n~~~~~~~~~--~~----~~~y~~~~~~~~~~d~~~~~~~~-----~~a~~q---~~~gtgal~~~~~~~~ 95 (583)
.-+.+|.+..+..+.+... ++ ...+..|.+..+..++...+.+. ...+-+ |.|+|.|+.+...+
T Consensus 61 l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l~~l-- 138 (432)
T 3ei9_A 61 LGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVM-- 138 (432)
T ss_dssp CSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHHHHH--
T ss_pred ccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHHHHH--
Confidence 4466888888776655432 11 01222333333446666666664 223333 44666666553222
Q ss_pred HhCCCCcEEEeCCCCCCChHhHhhhcCC
Q psy14428 96 RFYPGVKTVYFPTPTWNGHVRFCTDSRL 123 (583)
Q Consensus 96 ~~~~~~~~~~i~~ptw~nh~~if~~~g~ 123 (583)
..|+ ..|.+++|+|+.+...++..|.
T Consensus 139 -~~~g-d~Vl~~~p~y~~~~~~~~~~g~ 164 (432)
T 3ei9_A 139 -FGSN-VTIAVQDPSYPAYVDSSVIMGQ 164 (432)
T ss_dssp -HCTT-CCEEEEESCCTHHHHHHHHHTC
T ss_pred -cCCC-CEEEEeCCCCHHHHHHHHHcCC
Confidence 3354 7899999999999888877764
No 481
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=20.20 E-value=95 Score=30.48 Aligned_cols=65 Identities=12% Similarity=0.016 Sum_probs=44.5
Q ss_pred ecccchhHHHHHHHHHHhhcCCCeEEecCCCCcC--chhhhhhcCCCceeeeeccCCCCcccchhhhHHHHH
Q psy14428 5 QGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWN--GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIK 74 (583)
Q Consensus 5 q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~--n~~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~~ 74 (583)
-|-|||.|+.++...+.+ ++ .+|.+++|++- ....+++..|.++..++.-+ ...+|++.+.+.++
T Consensus 79 ~~~gg~~al~~~~~~~~~--~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~ 145 (393)
T 3kgw_A 79 VSGSGHCAMETALFNLLE--PG-DSFLTGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLA 145 (393)
T ss_dssp ESCCTTTHHHHHHHHHCC--TT-CEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHH
T ss_pred EeCCcHHHHHHHHHhcCC--CC-CEEEEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHh
Confidence 456899999988876632 55 67888877752 12566778898888887632 23578877666554
No 482
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=20.12 E-value=2.1e+02 Score=26.80 Aligned_cols=99 Identities=15% Similarity=0.090 Sum_probs=49.3
Q ss_pred CeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCC-------------C---hhhHHHHhhcCCeEEEEecccCCCCC
Q psy14428 231 RLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPT-------------W---NGHVRFCTDSRLNVGAYRYFDNKTNG 294 (583)
Q Consensus 231 ~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~-------------y---~~~~~~~~~~G~~~~~v~~~d~~~~g 294 (583)
.+++ ..|++++|=.. +...+...|..|++.+-. - ......++..|.++..+.. |-.
T Consensus 16 k~~l--VTGas~gIG~a--~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~--- 87 (280)
T 3pgx_A 16 RVAF--ITGAARGQGRS--HAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVL-DVR--- 87 (280)
T ss_dssp CEEE--EESTTSHHHHH--HHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEEC-CTT---
T ss_pred CEEE--EECCCcHHHHH--HHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEc-CCC---
Confidence 4444 45666666543 334444458888765321 1 1122233445777777766 432
Q ss_pred CChhhHHHHHHcC---CCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHH
Q psy14428 295 LDFAGMMEDIKAM---PERSILFLQTSSHNPTGV--DLSEDQWRQLAVV 338 (583)
Q Consensus 295 ~d~~~l~~~l~~~---~~~~~~i~i~~p~NPTG~--~~s~~~~~~l~~~ 338 (583)
|.+.+.+.+++. ..+..+++.+--..+.+. .++.+++++..+.
T Consensus 88 -~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (280)
T 3pgx_A 88 -DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGV 135 (280)
T ss_dssp -CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 555555544321 123445543322222221 3578888877664
No 483
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=20.12 E-value=3.9e+02 Score=24.84 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=48.3
Q ss_pred cCCchhHHHHHHHHHHHhCCCCCEEEEc-CCCCh---hhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcC---CC
Q psy14428 237 GISGSGSLRVGTAFLERFYPGVKTVYFP-TPTWN---GHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAM---PE 309 (583)
Q Consensus 237 t~G~~~al~l~~~~l~~~~~~gd~Vlv~-~P~y~---~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~---~~ 309 (583)
..|++++|=.. +...+...|..|++. ...-. .....++..|.++..+.. |-. |.+.+++.+++. ..
T Consensus 36 VTGas~GIG~a--ia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-Dv~----d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 36 VTGGSRGIGAA--IAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA-DNR----DAEAIEQAIRETVEALG 108 (271)
T ss_dssp EETTTSHHHHH--HHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC-CTT----CHHHHHHHHHHHHHHHS
T ss_pred EeCCCcHHHHH--HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEC-CCC----CHHHHHHHHHHHHHHcC
Confidence 45666666443 334444458777765 22212 122334445777777776 432 556555554322 12
Q ss_pred CcEEEEeCCCCCCCC--CCCCHHHHHHHHHHH
Q psy14428 310 RSILFLQTSSHNPTG--VDLSEDQWRQLAVVV 339 (583)
Q Consensus 310 ~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~a 339 (583)
+..+++.+--..+.+ ...+.+++++.++.-
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN 140 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVN 140 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 344454332222222 235788888877643
No 484
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=20.04 E-value=2.5e+02 Score=26.26 Aligned_cols=135 Identities=13% Similarity=0.068 Sum_probs=70.8
Q ss_pred CCeEEEecCCchhHHHHHHHHHHHhCCCCCEEEEcCCCC-hhhHHHHhhcCCeEEEEecccCCCCCCChhhHHHHHHcCC
Q psy14428 230 NRLAIVQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTW-NGHVRFCTDSRLNVGAYRYFDNKTNGLDFAGMMEDIKAMP 308 (583)
Q Consensus 230 ~~I~i~~t~G~~~al~l~~~~l~~~~~~gd~Vlv~~P~y-~~~~~~~~~~G~~~~~v~~~d~~~~g~d~~~l~~~l~~~~ 308 (583)
.++.+ ..|+..+|=.. +...|...|-.|++.+-.- ......++..|.++..+.. |-. |.+..++.++ .
T Consensus 9 GKval--VTGas~GIG~a--iA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~-Dv~----d~~~v~~~~~--~ 77 (247)
T 4hp8_A 9 GRKAL--VTGANTGLGQA--IAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLI-DFA----DPLAAKDSFT--D 77 (247)
T ss_dssp TCEEE--ETTTTSHHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEEC-CTT----STTTTTTSST--T
T ss_pred CCEEE--EeCcCCHHHHH--HHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEc-cCC----CHHHHHHHHH--h
Confidence 45666 66777777554 3344555587887654332 3455667778888887776 432 2222222221 1
Q ss_pred CCcEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhcCeEEEEeccCCCCCCCCCCCchHHHHHHHHh--cCcEEEEecCc
Q psy14428 309 ERSILFLQTSSHNPTG--VDLSEDQWRQLAVVVKQRHLYPFFDMAYLGLTSGDFDKDAFSLRYFAKE--VGQLCLAQSFS 384 (583)
Q Consensus 309 ~~~~~i~i~~p~NPTG--~~~s~~~~~~l~~~a~~~~i~iI~De~Y~~l~~~~~~~~~~~~~~~~~~--~~~vi~i~S~S 384 (583)
.+..+++.|---++.+ ..++.++|++++++--+ +.+.. -...++.+.+. .+++|.+.|.+
T Consensus 78 g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~-g~f~~---------------~~~~~~~m~~~g~~G~IVnisS~~ 141 (247)
T 4hp8_A 78 AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLK-ALFFT---------------TQAFAKELLAKGRSGKVVNIASLL 141 (247)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH-HHHHH---------------HHHHHHHHHHHTCCEEEEEECCGG
T ss_pred CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhH-HHHHH---------------HHHHHHHHHHhCCCcEEEEEechh
Confidence 2344444332222222 35789999999886433 11000 00112223222 46899999876
Q ss_pred ccccccC
Q psy14428 385 KNMGLYG 391 (583)
Q Consensus 385 K~~~l~G 391 (583)
=..+.+|
T Consensus 142 ~~~g~~~ 148 (247)
T 4hp8_A 142 SFQGGIR 148 (247)
T ss_dssp GTSCCSS
T ss_pred hCCCCCC
Confidence 6555333
No 485
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=20.04 E-value=35 Score=34.29 Aligned_cols=50 Identities=14% Similarity=0.097 Sum_probs=36.5
Q ss_pred eecccchhHHHHHHHHHHhhcCCCeEEecCCCCcCchhhh----hhcCCCceeeeec
Q psy14428 4 VQGISGSGSLRVGTAFLERFYPGVKTVYFPTPTWNGHVRF----CTDSRLNVGAYRY 56 (583)
Q Consensus 4 ~q~~~~tg~~~~~~~~~~~~~~~~~~~~~~~p~w~n~~~~----~~~~~~~~~~y~~ 56 (583)
+-+-|||.|+.++...+.+ ++ .+|.+++|+|+..... .+..|.++..++.
T Consensus 78 i~~~sG~~ai~~~~~~~~~--~g-d~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 131 (389)
T 3acz_A 78 AAFGSGMGAISSSTLAFLQ--KG-DHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT 131 (389)
T ss_dssp EEESSHHHHHHHHHTTTCC--TT-CEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEeCCHHHHHHHHHHHHhC--CC-CEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence 3456899999888765422 45 6899999999976555 4667888877765
Done!