RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14431
(1219 letters)
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 345 bits (888), Expect = e-108
Identities = 110/238 (46%), Positives = 164/238 (68%), Gaps = 22/238 (9%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
GKGAYGIV+K+ D+ + VA+KKIF+AF+N TDAQRT+REI+ L H NI+ +L++
Sbjct: 18 GKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNV 77
Query: 629 YKAVNNKDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKP 688
+A N++D+Y+VF+YME DL+ VIR IL+ VH +Y+++QL + Y+H+ ++HRD+KP
Sbjct: 78 LRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKP 137
Query: 689 SNILIDKSCSIKIGDLGLARSLSDSKEC---------------------LTEYIATRWYR 727
SNIL++ C +K+ D GL+RS + + LT+Y+ATRWYR
Sbjct: 138 SNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYR 197
Query: 728 APEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHAD 785
APEIL+ + +YT +D+WSLGCIL E+L KP+FPG+ST +QL+ I+ ++ P + D
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVI-DFPSNED 254
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 330 bits (849), Expect = e-103
Identities = 95/227 (41%), Positives = 142/227 (62%), Gaps = 16/227 (7%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+GAYG+V A K + VAIKKI E F A RT REI LK F +H NIIT+ +I
Sbjct: 20 GEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHF-KHENIITIFNI 77
Query: 629 YKAV---NNKDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
+ N ++Y++ E M+ DL++VI ++L D HI+Y ++Q + +H V+HRD
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRD 137
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSDSKEC----------LTEYIATRWYRAPEILISN 735
LKPSN+LI+ +C +K+ D GLAR + +S + E++ATRWYRAPE+++++
Sbjct: 138 LKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS 197
Query: 736 RRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLV-RPNP 781
+Y+ +D+WS GCILAE+ +P+FPG HQL LI ++ P+
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 326 bits (839), Expect = e-102
Identities = 88/233 (37%), Positives = 125/233 (53%), Gaps = 20/233 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G G+V+ A D + + VAIKKI + + REI ++ H NI+ + +I
Sbjct: 20 GCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRL-DHDNIVKVFEI 76
Query: 629 YKAVNN------------KDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYI 676
+ +Y+V EYME DL V+ L + H R M+QL GL YI
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYI 136
Query: 677 HACKVMHRDLKPSNILID-KSCSIKIGDLGLARSLS---DSKECLTEYIATRWYRAPEIL 732
H+ V+HRDLKP+N+ I+ + +KIGD GLAR + K L+E + T+WYR+P +L
Sbjct: 137 HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL 196
Query: 733 ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHAD 785
+S YT +D+W+ GCI AEML K LF GA Q+QLI+ + P D
Sbjct: 197 LSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI-PVVHEED 248
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 323 bits (829), Expect = e-100
Identities = 92/226 (40%), Positives = 137/226 (60%), Gaps = 9/226 (3%)
Query: 564 NLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNII 623
+L G GAYG V A D VAIKK++ F+++ A+R YRE+ LK RH N+I
Sbjct: 29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVI 87
Query: 624 TMLDIYKAVNN----KDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHAC 679
+LD++ D Y+V +M DL K+++ + L + I+++++Q+ GL YIHA
Sbjct: 88 GLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA 147
Query: 680 KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT 739
++HRDLKP N+ +++ C +KI D GLAR +T Y+ TRWYRAPE++++ RYT
Sbjct: 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYT 204
Query: 740 HHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHAD 785
VDIWS+GCI+AEM+ K LF G+ QL+ I+ + PP
Sbjct: 205 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT-GTPPAEF 249
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 323 bits (829), Expect = e-100
Identities = 110/223 (49%), Positives = 149/223 (66%), Gaps = 9/223 (4%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+GAYG+V AYD NK VAIKKI F ++T QRT REI L F RH NII + DI
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRF-RHENIIGINDI 93
Query: 629 YKAV---NNKDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
+A KD+Y+V + ME DL K+++ + L + HI Y ++Q+ GL YIH+ V+HRD
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 153
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLS---DSKECLTEYIATRWYRAPEILISNRRYTHHV 742
LKPSN+L++ +C +KI D GLAR D LTEY+ATRWYRAPEI+++++ YT +
Sbjct: 154 LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 743 DIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHAD 785
DIWS+GCILAEML ++P+FPG QL I+ ++ +P D
Sbjct: 214 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL-GSPSQED 255
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 319 bits (819), Expect = 2e-99
Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 9/213 (4%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G GAYG V A DK + + VAIKK+ F+++ A+R YRE+L LK +H N+I +LD+
Sbjct: 33 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDV 91
Query: 629 YKAV----NNKDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
+ N D Y+V +M+ DL K++ K + I+Y+++Q+ GL YIH+ V+HR
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK-FSEEKIQYLVYQMLKGLKYIHSAGVVHR 150
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDI 744
DLKP N+ +++ C +KI D GLAR +T Y+ TRWYRAPE+++S Y VDI
Sbjct: 151 DLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDI 207
Query: 745 WSLGCILAEMLQSKPLFPGASTSHQLQLIVNLV 777
WS+GCI+AEML K LF G QL I+ +
Sbjct: 208 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 240
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 315 bits (809), Expect = 8e-98
Identities = 93/213 (43%), Positives = 139/213 (65%), Gaps = 8/213 (3%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G GAYG V A+D VA+KK+ F++ A+RTYRE+ LK +H N+I +LD+
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDV 96
Query: 629 YKAVNN----KDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
+ + D+Y+V M DLN +++ + L D H++++++Q+ GL YIH+ ++HR
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHR 156
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDI 744
DLKPSN+ +++ C +KI D GLAR +D +T Y+ATRWYRAPEI+++ Y VDI
Sbjct: 157 DLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDI 213
Query: 745 WSLGCILAEMLQSKPLFPGASTSHQLQLIVNLV 777
WS+GCI+AE+L + LFPG QL+LI+ LV
Sbjct: 214 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 315 bits (808), Expect = 1e-97
Identities = 83/231 (35%), Positives = 116/231 (50%), Gaps = 18/231 (7%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEA---------FRNKTDAQRTYREILFLKSFQRH 619
G+YG V D VAIK++F + +R REI L F H
Sbjct: 31 SSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HH 88
Query: 620 PNIITMLDIYKAVNN---KDLYVVFEYMENDLNKVIR--DKILKDVHIRYIMFQLCNGLS 674
PNI+ + DI+ LY+V E M DL +VI ++ HI+Y M+ + GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 675 YIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILIS 734
+H V+HRDL P NIL+ + I I D LAR + T Y+ RWYRAPE+++
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN-KTHYVTHRWYRAPELVMQ 207
Query: 735 NRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHAD 785
+ +T VD+WS GC++AEM K LF G++ +QL IV +V P D
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVV-GTPKIED 257
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 308 bits (792), Expect = 3e-95
Identities = 85/218 (38%), Positives = 138/218 (63%), Gaps = 8/218 (3%)
Query: 564 NLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNII 623
NL G GA GIV AYD ++ VAIKK+ F+N+T A+R YRE++ +K H NII
Sbjct: 29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNII 87
Query: 624 TMLDIYKAVNN----KDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHAC 679
+L+++ + +D+Y+V E M+ +L +VI+ + L + Y+++Q+ G+ ++H+
Sbjct: 88 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHSA 146
Query: 680 KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT 739
++HRDLKPSNI++ C++KI D GLAR+ + +T Y+ TR+YRAPE+++ Y
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG-MGYK 204
Query: 740 HHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLV 777
+VDIWS+GCI+ EM++ LFPG Q ++ +
Sbjct: 205 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 242
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 310 bits (796), Expect = 4e-95
Identities = 93/271 (34%), Positives = 139/271 (51%), Gaps = 56/271 (20%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+G+YG VY AYDKN ++ VAIKK+ F + D +R REI L + II + D+
Sbjct: 35 GRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDL 93
Query: 629 YKAVNN---KDLYVVFEYMENDLNKVIRDKI-LKDVHIRYIMFQLCNGLSYIHACKVMHR 684
+ +LY+V E ++DL K+ + I L + HI+ I++ L G ++IH ++HR
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR 153
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKEC----------------------LTEYIA 722
DLKP+N L+++ CS+K+ D GLAR+++ K+ LT ++
Sbjct: 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213
Query: 723 TRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQS-----------KPLFPGASTS---- 767
TRWYRAPE+++ YT +DIWS GCI AE+L PLFPG+S
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP 273
Query: 768 -------------HQLQLIVNLVRPNPPHAD 785
QL +I N++ P D
Sbjct: 274 DRNSKKVHEKSNRDQLNIIFNII-GTPTEDD 303
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 308 bits (791), Expect = 5e-94
Identities = 91/279 (32%), Positives = 138/279 (49%), Gaps = 64/279 (22%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G+YG V +AYDK K+ VAIKKI F + D +R REI L H +++ +LDI
Sbjct: 62 GTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDI 120
Query: 629 YK---AVNNKDLYVVFEYMENDLNKVIRDKI-LKDVHIRYIMFQLCNGLSYIHACKVMHR 684
+LYVV E ++D K+ R + L ++HI+ +++ L G+ Y+H+ ++HR
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHR 180
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKEC---------------------------L 717
DLKP+N L+++ CS+K+ D GLAR++ + L
Sbjct: 181 DLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL 240
Query: 718 TEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQS-----------KPLFPGAST 766
T ++ TRWYRAPE+++ YT +D+WS+GCI AE+L PLFPG+S
Sbjct: 241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSC 300
Query: 767 --------------------SHQLQLIVNLVRPNPPHAD 785
QL +I N++ P D
Sbjct: 301 FPLSPDQKAGNDFKFHTRGNRDQLNVIFNIL-GTPSEED 338
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 308 bits (790), Expect = 7e-94
Identities = 85/221 (38%), Positives = 136/221 (61%), Gaps = 9/221 (4%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G GA GIV AYD + VAIKK+ F+N+T A+R YRE++ +K H NII++L++
Sbjct: 71 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNV 129
Query: 629 YKAVNN----KDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
+ +D+Y+V E M+ +L +VI+ L + Y+++Q+ G+ ++H+ ++HR
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHR 188
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDI 744
DLKPSNI++ C++KI D GLAR+ + +T Y+ TR+YRAPE+++ Y +VDI
Sbjct: 189 DLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDI 246
Query: 745 WSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHAD 785
WS+GCI+ EM++ K LFPG Q ++ + P
Sbjct: 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL-GTPCPEF 286
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 288 bits (738), Expect = 6e-88
Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 18/221 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+G +G V +K+ VAIKK+ + + R + + L HPNI+ +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQ---DPRFRNRELQIMQDLAVL-HHPNIVQLQSY 87
Query: 629 YKAVNNKD-----LYVVFEYMENDLNKVIR-----DKILKDVHIRYIMFQLCNGLSYIHA 678
+ + +D L VV EY+ + L++ R + I+ +FQL + +H
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL 147
Query: 679 C--KVMHRDLKPSNILIDKS-CSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISN 735
V HRD+KP N+L++++ ++K+ D G A+ LS E YI +R+YRAPE++ N
Sbjct: 148 PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICSRYYRAPELIFGN 206
Query: 736 RRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
+ YT VDIWS+GCI AEM+ +P+F G +++ QL IV +
Sbjct: 207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 287 bits (736), Expect = 8e-87
Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 18/218 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G++G+VY+A ++ + VAIKK+ + D + RE+ ++ H NI+ +
Sbjct: 63 GNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKL-DHCNIVRLRYF 115
Query: 629 YKAVNNK----DLYVVFEYMENDLNKVIRD-----KILKDVHIRYIMFQLCNGLSYIHAC 679
+ + K L +V +Y+ + +V R + L ++++ M+QL L+YIH+
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 680 KVMHRDLKPSNILIDKSC-SIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRY 738
+ HRD+KP N+L+D +K+ D G A+ L E YI +R+YRAPE++ Y
Sbjct: 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYYRAPELIFGATDY 234
Query: 739 THHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
T +D+WS GC+LAE+L +P+FPG S QL I+ +
Sbjct: 235 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 279 bits (716), Expect = 3e-85
Identities = 69/214 (32%), Positives = 118/214 (55%), Gaps = 11/214 (5%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
K G+G Y V++A + N + V +K + ++ REI L++ + PNIIT+
Sbjct: 43 KLGRGKYSEVFEAINITNNEKVVVKIL-----KPVKKKKIKREIKILENLRGGPNIITLA 97
Query: 627 DIYKAVNNKDLYVVFEY-MENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
DI K ++ +VFE+ D ++ + L D IR+ M+++ L Y H+ +MHRD
Sbjct: 98 DIVKDPVSRTPALVFEHVNNTDFKQLY--QTLTDYDIRFYMYEILKALDYCHSMGIMHRD 155
Query: 686 LKPSNILID-KSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDI 744
+KP N++ID + +++ D GLA +E +A+R+++ PE+L+ + Y + +D+
Sbjct: 156 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDYQMYDYSLDM 214
Query: 745 WSLGCILAEMLQSK-PLFPGASTSHQLQLIVNLV 777
WSLGC+LA M+ K P F G QL I ++
Sbjct: 215 WSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 278 bits (714), Expect = 4e-85
Identities = 75/212 (35%), Positives = 127/212 (59%), Gaps = 5/212 (2%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
K G+G+YG+V+K +++ Q VAIKK E+ + + REI LK +HPN++ +L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLL 68
Query: 627 DIYKAVNNKDLYVVFEYMENDLNKVIRD--KILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
++++ + L++VFEY ++ + + + + + ++ I +Q +++ H +HR
Sbjct: 69 EVFR--RKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHR 126
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDI 744
D+KP NILI K IK+ D G AR L+ + + +ATRWYR+PE+L+ + +Y VD+
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDV 186
Query: 745 WSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
W++GC+ AE+L PL+PG S QL LI
Sbjct: 187 WAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT 218
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 280 bits (717), Expect = 1e-84
Identities = 70/250 (28%), Positives = 122/250 (48%), Gaps = 50/250 (20%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G++GIV + +D + + A+KK+ + D + RE+ +K H NII ++D
Sbjct: 16 GTGSFGIVCEVFDIESGKRFALKKVLQ------DPRYKNRELDIMKVL-DHVNIIKLVDY 68
Query: 629 Y------------------------------------KAVNNKDLYVVFEYMENDLNKVI 652
+ NK L V+ EY+ + L+KV+
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 653 R-----DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILID-KSCSIKIGDLGL 706
+ + + I ++QL + +IH+ + HRD+KP N+L++ K ++K+ D G
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGS 188
Query: 707 ARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGAST 766
A+ L E YI +R+YRAPE+++ YT +D+WS+GC+ E++ KPLF G ++
Sbjct: 189 AKKL-IPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS 247
Query: 767 SHQLQLIVNL 776
QL I+ +
Sbjct: 248 IDQLVRIIQI 257
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 273 bits (701), Expect = 3e-82
Identities = 72/218 (33%), Positives = 124/218 (56%), Gaps = 19/218 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G++G+V++A + + VAIKK+ + D + RE+ ++ +HPN++ +
Sbjct: 49 GNGSFGVVFQAKLVESDE-VAIKKVLQ------DKRFKNRELQIMRIV-KHPNVVDLKAF 100
Query: 629 YKAVNNK----DLYVVFEYMENDLNKVIRD-----KILKDVHIRYIMFQLCNGLSYIHAC 679
+ + +K L +V EY+ + + R + + + I+ M+QL L+YIH+
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 680 KVMHRDLKPSNILIDKSC-SIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRY 738
+ HRD+KP N+L+D +K+ D G A+ L + E YI +R+YRAPE++ Y
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSYICSRYYRAPELIFGATNY 219
Query: 739 THHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
T ++DIWS GC++AE++Q +PLFPG S QL I+ +
Sbjct: 220 TTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV 257
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 269 bits (690), Expect = 2e-81
Identities = 78/210 (37%), Positives = 128/210 (60%), Gaps = 5/210 (2%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+G+YG+V K +K+ + VAIKK E+ +K + REI LK RH N++ +L++
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEV 92
Query: 629 YKAVNNKDLYVVFEYMENDLNKVIRD--KILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
K K Y+VFE++++ + + L ++ +FQ+ NG+ + H+ ++HRD+
Sbjct: 93 CK--KKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWS 746
KP NIL+ +S +K+ D G AR+L+ E + +ATRWYRAPE+L+ + +Y VD+W+
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWA 210
Query: 747 LGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
+GC++ EM +PLFPG S QL I+
Sbjct: 211 IGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 253 bits (648), Expect = 3e-76
Identities = 89/217 (41%), Positives = 122/217 (56%), Gaps = 18/217 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR------TYREILFLKSFQRHPNI 622
G+G YG+VYKA +K + VA+KKI + D + REI LK HPNI
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKI------RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 623 ITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDK---ILKDVHIRYIMFQLCNGLSYIHAC 679
+ +LD+ LY+VFE++ DL K + + I+ +FQL GL++ H+
Sbjct: 65 VKLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 680 KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT 739
+V+HRDLKP N+LI+ +IK+ D GLAR+ T + T WYRAPEIL+ + Y+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYS 182
Query: 740 HHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
VDIWSLGCI AEM+ + LFPG S QL I
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 254 bits (651), Expect = 6e-76
Identities = 88/221 (39%), Positives = 121/221 (54%), Gaps = 20/221 (9%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTY---------REILFLKSFQ 617
G+G + VYKA DKN Q VAIKKI K + REI L+
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKI------KLGHRSEAKDGINRTALREIKLLQEL- 69
Query: 618 RHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDK--ILKDVHIRYIMFQLCNGLSY 675
HPNII +LD + + ++ +VF++ME DL +I+D +L HI+ M GL Y
Sbjct: 70 SHPNIIGLLDAF--GHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 676 IHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISN 735
+H ++HRDLKP+N+L+D++ +K+ D GLA+S T + TRWYRAPE+L
Sbjct: 128 LHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA 187
Query: 736 RRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
R Y VD+W++GCILAE+L P PG S QL I
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET 228
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 251 bits (644), Expect = 9e-76
Identities = 75/217 (34%), Positives = 119/217 (54%), Gaps = 18/217 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR------TYREILFLKSFQRHPNI 622
G+G YG V+KA ++ + VA+K++ + D REI LK +H NI
Sbjct: 11 GEGTYGTVFKAKNRETHEIVALKRV------RLDDDDEGVPSSALREICLLKEL-KHKNI 63
Query: 623 ITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDK--ILKDVHIRYIMFQLCNGLSYIHACK 680
+ + D+ ++K L +VFE+ + DL K L ++ +FQL GL + H+
Sbjct: 64 VRLHDVL--HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 681 VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTH 740
V+HRDLKP N+LI+++ +K+ + GLAR+ C + + T WYR P++L + Y+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 741 HVDIWSLGCILAEMLQS-KPLFPGASTSHQLQLIVNL 776
+D+WS GCI AE+ + +PLFPG QL+ I L
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 251 bits (643), Expect = 2e-75
Identities = 87/218 (39%), Positives = 134/218 (61%), Gaps = 18/218 (8%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR------TYREILFLKSFQRHP 620
K G+G YG+VYKA D + VA+K+I + DA+ REI LK HP
Sbjct: 28 KVGEGTYGVVYKAKDSQG-RIVALKRI------RLDAEDEGIPSTAIREISLLKEL-HHP 79
Query: 621 NIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDK--ILKDVHIRYIMFQLCNGLSYIHA 678
NI++++D+ + + L +VFE+ME DL KV+ + L+D I+ ++QL G+++ H
Sbjct: 80 NIVSLIDVI--HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 679 CKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRY 738
+++HRDLKP N+LI+ ++K+ D GLAR+ T + T WYRAP++L+ +++Y
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 739 THHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
+ VDIWS+GCI AEM+ KPLFPG + QL I ++
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 249 bits (638), Expect = 5e-75
Identities = 84/216 (38%), Positives = 126/216 (58%), Gaps = 18/216 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR------TYREILFLKSFQRHPNI 622
G+G YG+VYKA + + A+KKI + + + T REI LK +H NI
Sbjct: 11 GEGTYGVVYKAQNNYG-ETFALKKI------RLEKEDEGIPSTTIREISILKEL-KHSNI 62
Query: 623 ITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDK--ILKDVHIRYIMFQLCNGLSYIHACK 680
+ + D+ K L +VFE+++ DL K++ L+ V + + QL NG++Y H +
Sbjct: 63 VKLYDVI--HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 681 VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTH 740
V+HRDLKP N+LI++ +KI D GLAR+ T I T WYRAP++L+ +++Y+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 741 HVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
+DIWS+GCI AEM+ PLFPG S + QL I +
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 250 bits (640), Expect = 6e-75
Identities = 85/222 (38%), Positives = 128/222 (57%), Gaps = 21/222 (9%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR-----TYREILFLKSFQRHPN 621
K G G Y VYK +K YVA+K++ K D++ REI +K +H N
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEV------KLDSEEGTPSTAIREISLMKEL-KHEN 64
Query: 622 IITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDKILKDV-------HIRYIMFQLCNGLS 674
I+ + D+ L +VFE+M+NDL K + + + + ++Y +QL GL+
Sbjct: 65 IVRLYDVI--HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 675 YIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILIS 734
+ H K++HRDLKP N+LI+K +K+GD GLAR+ + + T WYRAP++L+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 735 NRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
+R Y+ +DIWS GCILAEM+ KPLFPG + QL+LI ++
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDI 224
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 250 bits (640), Expect = 1e-74
Identities = 88/222 (39%), Positives = 123/222 (55%), Gaps = 21/222 (9%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR------TYREILFLKSFQRHP 620
K G+G YG VYKA D + VAIK+I + + + RE+ LK +H
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRI------RLEHEEEGVPGTAIREVSLLKEL-QHR 93
Query: 621 NIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDKI-LKDVHIRYIMFQLCNGLSYIHAC 679
NII + + +N L+++FEY ENDL K + + I+ ++QL NG+++ H+
Sbjct: 94 NIIELKSVI--HHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 680 KVMHRDLKPSNILIDKSCS-----IKIGDLGLARSLSDSKECLTEYIATRWYRAPEILIS 734
+ +HRDLKP N+L+ S + +KIGD GLAR+ T I T WYR PEIL+
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 735 NRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
+R Y+ VDIWS+ CI AEML PLFPG S QL I +
Sbjct: 212 SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV 253
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 248 bits (635), Expect = 5e-74
Identities = 81/219 (36%), Positives = 122/219 (55%), Gaps = 16/219 (7%)
Query: 565 LLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQ-----RTYREILFLKSFQRH 619
L K G+G Y VYK K VA+K+I + + + RE+ LK +H
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEI------RLEHEEGAPCTAIREVSLLKDL-KH 59
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDK--ILKDVHIRYIMFQLCNGLSYIH 677
NI+T+ DI K L +VFEY++ DL + + D I+ +++ +FQL GL+Y H
Sbjct: 60 ANIVTLHDII--HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 678 ACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRR 737
KV+HRDLKP N+LI++ +K+ D GLAR+ S + + T WYR P+IL+ +
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 738 YTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
Y+ +D+W +GCI EM +PLFPG++ QL I +
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI 216
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 241 bits (617), Expect = 7e-72
Identities = 81/225 (36%), Positives = 118/225 (52%), Gaps = 25/225 (11%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR---------TYREILFLK--SFQ 617
G GAYG VYKA D ++ +VA+K + + T RE+ L+
Sbjct: 18 GVGAYGTVYKARDPHSGHFVALKSV------RVPNGGGGGGGLPISTVREVALLRRLEAF 71
Query: 618 RHPNIITMLDIYKAVNNKD---LYVVFEYMENDLNKVIRD---KILKDVHIRYIMFQLCN 671
HPN++ ++D+ + +VFE+++ DL + L I+ +M Q
Sbjct: 72 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 672 GLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEI 731
GL ++HA ++HRDLKP NIL+ ++K+ D GLAR S LT + T WYRAPE+
Sbjct: 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTPVVVTLWYRAPEV 190
Query: 732 LISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
L+ Y VD+WS+GCI AEM + KPLF G S + QL I +L
Sbjct: 191 LLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 234
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 239 bits (613), Expect = 1e-70
Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 25/230 (10%)
Query: 565 LLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR------TYREILFLKSFQR 618
L K G+G +G V+KA + Q VA+KK+ + ++ REI L+ +
Sbjct: 22 LAKIGQGTFGEVFKARHRKTGQKVALKKV------LMENEKEGFPITALREIKILQLL-K 74
Query: 619 HPNIITMLDI------YKAVNNKDLYVVFEYMENDLNKVIRDK--ILKDVHIRYIMFQLC 670
H N++ +++I +Y+VF++ E+DL ++ + I+ +M L
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 671 NGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARS----LSDSKECLTEYIATRWY 726
NGL YIH K++HRD+K +N+LI + +K+ D GLAR+ + T + T WY
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY 194
Query: 727 RAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL 776
R PE+L+ R Y +D+W GCI+AEM P+ G + HQL LI L
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 236 bits (604), Expect = 8e-70
Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 24/229 (10%)
Query: 569 GKGAYGIVYKAYD-KNNKQYVAIKKIFEAFRNKTDAQR------TYREILFLKSFQ--RH 619
G+GAYG V+KA D KN ++VA+K++ + T RE+ L+ + H
Sbjct: 20 GEGAYGKVFKARDLKNGGRFVALKRV------RVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 620 PNIITMLDI---YKAVNNKDLYVVFEYMENDLNKVIRD---KILKDVHIRYIMFQLCNGL 673
PN++ + D+ + L +VFE+++ DL + + I+ +MFQL GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 674 SYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILI 733
++H+ +V+HRDLKP NIL+ S IK+ D GLAR S LT + T WYRAPE+L+
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEVLL 192
Query: 734 SNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLV-RPNP 781
Y VD+WS+GCI AEM + KPLF G+S QL I++++ P
Sbjct: 193 Q-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 237 bits (605), Expect = 5e-69
Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 34/261 (13%)
Query: 544 DYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNK--QYVAIKKIFEAFRNKT 601
D+K + + EDL + K G+G YG VYKA K+ K + A+K+I + +
Sbjct: 6 DFKVKLSSERERVEDLFEYEGC-KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS 64
Query: 602 DAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVI--------- 652
REI L+ +HPN+I++ ++ + ++ ++++F+Y E+DL +I
Sbjct: 65 ----ACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN 119
Query: 653 -RDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCS----IKIGDLGLA 707
+ L ++ +++Q+ +G+ Y+HA V+HRDLKP+NIL+ +KI D+G A
Sbjct: 120 KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179
Query: 708 RSLSDSKECLTEYIA---TRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGA 764
R + + L + T WYRAPE+L+ R YT +DIW++GCI AE+L S+P+F
Sbjct: 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239
Query: 765 S---------TSHQLQLIVNL 776
QL I N+
Sbjct: 240 QEDIKTSNPYHHDQLDRIFNV 260
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 194 bits (495), Expect = 8e-56
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G+YG K K++ + + K++ + + Q E+ L+ +HPNI+ D
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDR 73
Query: 629 YKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVH-----IRYIMFQLCNGLSYIHACK-- 680
N LY+V EY E DL VI + + + +M QL L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 681 ---VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRR 737
V+HRDLKP+N+ +D ++K+GD GLAR L+ ++ T +Y +PE + +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM-NRMS 192
Query: 738 YTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFY 788
Y DIWSLGC+L E+ P F S Q +L + Y
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFS---QKELAGKIREGKFRRIPYRY 240
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 195 bits (497), Expect = 1e-55
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKI-FEAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G+G + VY+A + VA+KK+ + +EI LK HPN+I
Sbjct: 41 GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYA 99
Query: 628 IYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVH-----IRYIMFQLCNGLSYIHACKV 681
+ + + +L +V E + DL+++I+ + + QLC+ L ++H+ +V
Sbjct: 100 SF--IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV 157
Query: 682 MHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHH 741
MHRD+KP+N+ I + +K+GDLGL R S + T +Y +PE I Y
Sbjct: 158 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER-IHENGYNFK 216
Query: 742 VDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP 782
DIWSLGC+L EM + F G + L + + + P
Sbjct: 217 SDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQCDYP 256
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 195 bits (497), Expect = 1e-55
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 7/204 (3%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G+YG V+K K + + A+K+ FR D R E+ + +HP + +
Sbjct: 66 GHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQA 125
Query: 629 YKAVNNKDLYVVFEYMENDLNKVIRD--KILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
++ LY+ E L + L + + + L+++H+ ++H D+
Sbjct: 126 WE--EGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDV 183
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWS 746
KP+NI + K+GD GL L + + Y APE+L Y D++S
Sbjct: 184 KPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ-EGDPRYMAPELL--QGSYGTAADVFS 240
Query: 747 LGCILAEMLQSKPLFPGASTSHQL 770
LG + E+ + L G QL
Sbjct: 241 LGLTILEVACNMELPHGGEGWQQL 264
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 193 bits (492), Expect = 1e-54
Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 8/211 (3%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+G++G + + IK+I + + + + + RE+ L + +HPNI+ +
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRES 91
Query: 629 YKAVNNKDLYVVFEYMEN-DLNKVIRDK---ILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
+ N LY+V +Y E DL K I + + ++ I Q+C L ++H K++HR
Sbjct: 92 F--EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR 149
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDI 744
D+K NI + K ++++GD G+AR L+ + E I T +Y +PEI N+ Y + DI
Sbjct: 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI-CENKPYNNKSDI 208
Query: 745 WSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
W+LGC+L E+ K F S + + I++
Sbjct: 209 WALGCVLYELCTLKHAFEAGSMKNLVLKIIS 239
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 184 bits (470), Expect = 2e-52
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 29/230 (12%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G +G V+KA + + + IK++ K + ++ RE+ L H NI+
Sbjct: 20 GSGGFGQVFKAKHRIDGKTYVIKRV------KYNNEKAEREVKALAKL-DHVNIVHYNGC 72
Query: 629 Y--------------KAVNNKDLYVVFEYMEN-DLNKVI---RDKILKDVHIRYIMFQLC 670
+ K L++ E+ + L + I R + L V + Q+
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 671 NGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPE 730
G+ YIH+ K+++RDLKPSNI + + +KIGD GL SL + + T T Y +PE
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPE 191
Query: 731 ILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPN 780
IS++ Y VD+++LG ILAE+L TS + + + +
Sbjct: 192 Q-ISSQDYGKEVDLYALGLILAELL--HVCDTAFETSKFFTDLRDGIISD 238
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 185 bits (471), Expect = 3e-52
Identities = 73/248 (29%), Positives = 110/248 (44%), Gaps = 34/248 (13%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+GA+G V KA + + +Y AIKKI + E++ L S H ++
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASL-NHQYVVRYYAA 70
Query: 629 YKAVNNKD-----------LYVVFEYMEN-DLNKVIRDKILKD--VHIRYIMFQLCNGLS 674
+ N L++ EY EN L +I + L + Q+ LS
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 675 YIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKEC--------------LTEY 720
YIH+ ++HRDLKP NI ID+S ++KIGD GLA+++ S + LT
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 721 IATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPN 780
I T Y A E+L Y +D++SLG I EM+ P G + L+ + ++
Sbjct: 191 IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEF 248
Query: 781 PPHADKFY 788
PP D
Sbjct: 249 PPDFDDNK 256
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 183 bits (467), Expect = 8e-52
Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 32/241 (13%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+G +G+V++A +K + AIK+I + ++ RE+ L HP I+ +
Sbjct: 14 GRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKL-EHPGIVRYFNA 71
Query: 629 YKAVNNKD----------LYVVFEYMEN-DLNKVIRDK----ILKDVHIRYIMFQLCNGL 673
+ N + LY+ + +L + + + +I Q+ +
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 674 SYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKEC------------LTEYI 721
++H+ +MHRDLKPSNI +K+GD GL ++ +E T +
Sbjct: 132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV 191
Query: 722 ATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNP 781
T+ Y +PE + Y+H VDI+SLG IL E+L P L + NL P
Sbjct: 192 GTKLYMSPEQI-HGNSYSHKVDIFSLGLILFELLY--PFSTQMERVRTLTDVRNLKFPPL 248
Query: 782 P 782
Sbjct: 249 F 249
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 180 bits (458), Expect = 2e-50
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPN--IITML 626
G G V++ ++ Q AIK + + EI +L + + II +
Sbjct: 37 GSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQHSDKIIRLY 94
Query: 627 DIYKAVNNKDLYVVFEYMENDLNKVIRDK-ILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
D ++ +Y+V E DLN ++ K + + + + IH ++H D
Sbjct: 95 DYEI--TDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 152
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSD--SKECLTEYIATRWYRAPEILISN-------- 735
LKP+N LI +K+ D G+A + + + T Y PE +
Sbjct: 153 LKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 736 --RRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP 782
+ + D+WSLGCIL M K F +Q+ + ++ PN
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHE 258
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 177 bits (450), Expect = 2e-49
Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 22/244 (9%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLD- 627
G+G + V ++ + A+K+I + D + RE + F HPNI+ ++
Sbjct: 38 GEGGFSYVDLVEGLHDGHFYALKRIL--CHEQQDREEAQREADMHRLF-NHPNILRLVAY 94
Query: 628 -IYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVH-----IRYIMFQLCNGLSYIHACK 680
+ + + +++ + + L I K I +++ +C GL IHA
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 681 VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIA---------TRWYRAPEI 731
HRDLKP+NIL+ + DLG E + + T YRAPE+
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 732 --LISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYA 789
+ S+ D+WSLGC+L M+ + + + + + P + + +
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSS 274
Query: 790 GFKS 793
Sbjct: 275 ALWQ 278
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 175 bits (445), Expect = 6e-49
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 33/235 (14%)
Query: 561 QQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHP 620
++ + G G +G V+K + + AIK+ + D Q RE+ +H
Sbjct: 14 HELEKI--GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 621 NIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD-----KILKDVHIRYIMFQLCNGLS 674
+++ + + + + EY L I + K+ ++ ++ Q+ GL
Sbjct: 72 HVVRYFSAW--AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 675 YIHACKVMHRDLKPSNILIDKSCSI-------------------KIGDLGLARSLSDSKE 715
YIH+ ++H D+KPSNI I ++ KIGDLG +S +
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189
Query: 716 CLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQL 770
+ A E+L N + DI++L + ++PL H++
Sbjct: 190 E----EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEI 240
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 175 bits (445), Expect = 9e-49
Identities = 57/301 (18%), Positives = 105/301 (34%), Gaps = 25/301 (8%)
Query: 553 MKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREIL 611
M + L G+GA V++ K AIK +F RE
Sbjct: 1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFE 59
Query: 612 FLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK----ILKDVHIRYIM 666
LK H NI+ + I + + ++ E+ L V+ + L + ++
Sbjct: 60 VLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118
Query: 667 FQLCNGLSYIHACKVMHRDLKPSNILI----DKSCSIKIGDLGLARSLSDSKECLTEYIA 722
+ G++++ ++HR++KP NI+ D K+ D G AR L D ++ ++ Y
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-G 177
Query: 723 TRWYRAPEIL-------ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
T Y P++ ++Y VD+WS+G F + + ++
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Query: 776 LVRPNPPHADKFYAGFKSKHEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSK 835
+ P + + V C L + T L +E D +
Sbjct: 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCS-----LSRGLQVLLTPVLANILEADQE 292
Query: 836 D 836
Sbjct: 293 K 293
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 175 bits (445), Expect = 2e-48
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPN--IITML 626
G G V++ ++ Q AIK + + EI +L + + II +
Sbjct: 18 GSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQHSDKIIRLY 75
Query: 627 DIYKAVNNKDLYVVFEYMENDLNKVIRDK-ILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
D ++ +Y+V E DLN ++ K + + + + IH ++H D
Sbjct: 76 DYEI--TDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 133
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSDSKE--CLTEYIATRWYRAPEILI---------- 733
LKP+N LI +K+ D G+A + + T Y PE +
Sbjct: 134 LKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192
Query: 734 SNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP 782
S + + D+WSLGCIL M K F +Q+ + ++ PN
Sbjct: 193 SKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAIIDPNHE 239
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 169 bits (430), Expect = 2e-46
Identities = 70/251 (27%), Positives = 107/251 (42%), Gaps = 33/251 (13%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLD- 627
+G + VY+A D + + A+K++ + + +E+ F+K HPNI+
Sbjct: 37 AEGGFAFVYEAQDVGSGREYALKRLL--SNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 628 --IYKAVNNKDLYVVFEYME-------NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHA 678
I K ++ E L K+ L + I +Q C + ++H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 679 CK--VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDS--------KECLTEYIATR---- 724
K ++HRDLK N+L+ +IK+ D G A ++S + L E TR
Sbjct: 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTP 214
Query: 725 WYRAPEI--LISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP 782
YR PEI L SN DIW+LGCIL + + F + +L+ IVN PP
Sbjct: 215 MYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA---KLR-IVNGKYSIPP 270
Query: 783 HADKFYAGFKS 793
H D Y F S
Sbjct: 271 H-DTQYTVFHS 280
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 170 bits (433), Expect = 3e-46
Identities = 57/301 (18%), Positives = 101/301 (33%), Gaps = 25/301 (8%)
Query: 553 MKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREIL 611
M + L G+GA V++ K AIK +F RE
Sbjct: 1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIK-VFNNISFLRPVDVQMREFE 59
Query: 612 FLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK----ILKDVHIRYIM 666
LK H NI+ + I + + ++ E+ L V+ + L + ++
Sbjct: 60 VLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118
Query: 667 FQLCNGLSYIHACKVMHRDLKPSNILI----DKSCSIKIGDLGLARSLSDSKECLTEYIA 722
+ G++++ ++HR++KP NI+ D K+ D G AR L D E
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYG 177
Query: 723 TRWYRAPEIL-------ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
T Y P++ ++Y VD+WS+G F + + ++
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Query: 776 LVRPNPPHADKFYAGFKSKHEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSK 835
+ P + + V C L + T L +E D +
Sbjct: 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCS-----LSRGLQVLLTPVLANILEADQE 292
Query: 836 D 836
Sbjct: 293 K 293
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 169 bits (429), Expect = 7e-46
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPN--IITML 626
G G V++ ++ Q AIK + + EI +L + + II +
Sbjct: 65 GSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQHSDKIIRLY 122
Query: 627 DIYKAVNNKDLYVVFEYMENDLNKVIRDK-ILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
D ++ +Y+V E DLN ++ K + + + + IH ++H D
Sbjct: 123 DYEI--TDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 180
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSD--SKECLTEYIATRWYRAPEILI---------- 733
LKP+N LI +K+ D G+A + + + Y PE +
Sbjct: 181 LKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK 239
Query: 734 SNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP 782
S + + D+WSLGCIL M K F +Q+ + ++ PN
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHE 286
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 168 bits (428), Expect = 2e-45
Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 28/263 (10%)
Query: 531 KESLLSNGKEREVDYKKSIDQLMKDR---------EDLQQQINLLKE-GKGAYGIVYKAY 580
K L+N E + ++ + D + L+ + + K G GA G V A+
Sbjct: 96 KRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAF 155
Query: 581 DKNNKQYVAIKKI------FEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNN 634
++ + VAI+ I + R A EI LK HP II + + + +
Sbjct: 156 ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFF---DA 211
Query: 635 KDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNIL 692
+D Y+V E ME +L +KV+ +K LK+ + +Q+ + Y+H ++HRDLKP N+L
Sbjct: 212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 271
Query: 693 I---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEIL--ISNRRYTHHVDIWSL 747
+ ++ C IKI D G ++ L ++ + T Y APE+L + Y VD WSL
Sbjct: 272 LSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330
Query: 748 GCILAEMLQSKPLFPGASTSHQL 770
G IL L P F T L
Sbjct: 331 GVILFICLSGYPPFSEHRTQVSL 353
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 168 bits (428), Expect = 3e-45
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 25/260 (9%)
Query: 539 KEREVDYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFR 598
++ + D + S+ + K + + G GA G + + + VA+K+I
Sbjct: 8 EQDDGDEETSVVIVGKISFCPKDVL-----GHGAEGTIVYR-GMFDNRDVAVKRI----- 56
Query: 599 NKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVI--RDKI 656
RE+ L+ HPN+I K + + Y+ E L + + +D
Sbjct: 57 LPECFSFADREVQLLRESDEHPNVIRYFCTEK--DRQFQYIAIELCAATLQEYVEQKDFA 114
Query: 657 LKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILI-----DKSCSIKIGDLGLARSLS 711
+ ++ Q +GL+++H+ ++HRDLKP NILI I D GL + L+
Sbjct: 115 HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174
Query: 712 D---SKECLTEYIATRWYRAPEIL--ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGAST 766
S + T + APE+L T+ VDI+S GC+ ++ G S
Sbjct: 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL 234
Query: 767 SHQLQLIVNLVRPNPPHADK 786
Q +++ + H +K
Sbjct: 235 QRQANILLGACSLDCLHPEK 254
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 162 bits (413), Expect = 1e-44
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
GKG + ++ D + K+ A K + ++ EI +S H +++
Sbjct: 24 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHG 82
Query: 628 IYKAVNNKDLYVVFEYMEN-DLNKVI-RDKILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
++ +N ++VV E L ++ R K L + RY + Q+ G Y+H +V+HRD
Sbjct: 83 FFE--DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIW 745
LK N+ +++ +KIGD GLA + E T Y APE+ +S + ++ VD+W
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKKGHSFEVDVW 199
Query: 746 SLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPH 783
S+GCI+ +L KP F + I P H
Sbjct: 200 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 237
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 165 bits (420), Expect = 4e-44
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 30/282 (10%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRT-YREILFLKSFQRHP-----NI 622
GKG++G V KAYD Q+VA+K + RN+ R EI L+ ++ N+
Sbjct: 106 GKGSFGQVVKAYDHKVHQHVALKMV----RNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 623 ITMLD--IYKAVNNKDLYVVFEYMENDLNKVIRD---KILKDVHIRYIMFQLCNGLSYIH 677
I ML+ ++ + + FE + +L ++I+ + +R + L +H
Sbjct: 162 IHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 678 ACKVMHRDLKPSNILI--DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISN 735
+++H DLKP NIL+ IK+ D G + + + YI +R+YRAPE+++
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTYIQSRFYRAPEVIL-G 273
Query: 736 RRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYAGFKSKH 795
RY +D+WSLGCILAE+L PL PG QL ++ L+ SK
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD-----ASKR 328
Query: 796 EREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDS 837
+ + + L V N + + +S
Sbjct: 329 AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPES 370
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 160 bits (407), Expect = 6e-44
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+G++ VYK D VA ++ + K++ QR E LK Q HPNI+ D
Sbjct: 35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPNIVRFYDS 93
Query: 629 YKAVNNKD--LYVVFEYMEN-DLNKVIRD-KILKDVHIRYIMFQLCNGLSYIHACK--VM 682
+++ + +V E M + L ++ K++K +R Q+ GL ++H ++
Sbjct: 94 WESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 683 HRDLKPSNILID-KSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHH 741
HRDLK NI I + S+KIGDLGLA S I T + APE+ +Y
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA--KAVIGTPEFMAPEMY--EEKYDES 209
Query: 742 VDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHA 784
VD+++ G + EM S+ + + Q+ V P +
Sbjct: 210 VDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT--SGVKPAS 250
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 160 bits (407), Expect = 8e-44
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 554 KDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI-------FEAFRNKTDAQR 605
+ + G+G +V + K + A+K I F A + +
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 606 TYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI-- 662
T +E+ L+ HPNII + D Y+ N ++VF+ M+ +L D + + V +
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYE--TNTFFFLVFDLMKKGEL----FDYLTEKVTLSE 123
Query: 663 ---RYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTE 719
R IM L + +H ++HRDLKP NIL+D +IK+ D G + L E L E
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLRE 182
Query: 720 YIATRWYRAPEIL-----ISNRRYTHHVDIWSLGCIL 751
T Y APEI+ ++ Y VD+WS G I+
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 161 bits (410), Expect = 9e-44
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
GKG + ++ D + K+ A K + ++ EI +S H +++
Sbjct: 50 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHG 108
Query: 628 IYKAVNNKDLYVVFEYMEN-DLNKVI-RDKILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
++ +N ++VV E L ++ R K L + RY + Q+ G Y+H +V+HRD
Sbjct: 109 FFE--DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIW 745
LK N+ +++ +KIGD GLA + E T Y APE+ +S + ++ VD+W
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKKGHSFEVDVW 225
Query: 746 SLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPH 783
S+GCI+ +L KP F + I P H
Sbjct: 226 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 263
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 161 bits (409), Expect = 2e-43
Identities = 30/252 (11%), Positives = 70/252 (27%), Gaps = 36/252 (14%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSF----------- 616
G +V+ D + A+K A ++++ +R +
Sbjct: 71 RVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDR 130
Query: 617 ------------QRHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVIR--------DKI 656
Q P + + ++ DL +
Sbjct: 131 RRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGD 190
Query: 657 LKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKEC 716
+ + + QL + + + ++H P N+ I + +GD+ +
Sbjct: 191 EGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPA 250
Query: 717 LTEYIATRWYRAPEILISNRR-YTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
+ Y E L ++ +TH ++ W LG + + F + +
Sbjct: 251 SS---VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRP 307
Query: 776 LVRPNPPHADKF 787
+R + F
Sbjct: 308 SLRVPGTDSLAF 319
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 160 bits (406), Expect = 3e-43
Identities = 55/279 (19%), Positives = 100/279 (35%), Gaps = 29/279 (10%)
Query: 523 KHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDK 582
+ + E +L K + VDY+ ++ + G+G++G V++ DK
Sbjct: 29 RLGPETEDNEGVLLTEKLKPVDYEY------REEVHWMTHQPRV--GRGSFGEVHRMKDK 80
Query: 583 NNKQYVAIKKI-FEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVF 641
A+KK+ E FR E++ P I+ + + + +
Sbjct: 81 QTGFQCAVKKVRLEVFRV--------EELVACAGL-SSPRIVPLYGAVR--EGPWVNIFM 129
Query: 642 EYMEN-DLNKVIRD-KILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKS-CS 698
E +E L ++I+ L + Y + Q GL Y+H +++H D+K N+L+
Sbjct: 130 ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSR 189
Query: 699 IKIGDLGLARSLSDSKECLTEYIA-----TRWYRAPEILISNRRYTHHVDIWSLGCILAE 753
+ D G A L + T + APE+ + + VDIWS C++
Sbjct: 190 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV-VMGKPCDAKVDIWSSCCMMLH 248
Query: 754 MLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYAGFK 792
ML + I + P
Sbjct: 249 MLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTA 287
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 158 bits (402), Expect = 3e-43
Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 7/197 (3%)
Query: 564 NLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNII 623
K G+GA G VY A D Q VAI+++ + + + EIL ++ ++PNI+
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIINEILVMREN-KNPNIV 80
Query: 624 TMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVM 682
LD Y + +L+VV EY+ L V+ + + + I + + L ++H+ +V+
Sbjct: 81 NYLDSY--LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVI 138
Query: 683 HRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHV 742
HRD+K NIL+ S+K+ D G ++ + + + T ++ APE+ ++ + Y V
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV-VTRKAYGPKV 197
Query: 743 DIWSLGCILAEMLQSKP 759
DIWSLG + EM++ +P
Sbjct: 198 DIWSLGIMAIEMIEGEP 214
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 161 bits (408), Expect = 4e-43
Identities = 78/257 (30%), Positives = 126/257 (49%), Gaps = 32/257 (12%)
Query: 542 EVDYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKT 601
DY + DR ++ I GKG++G V KAYD+ +++VAIK I +NK
Sbjct: 41 NYDYIVKNGEKWMDRYEIDSLI-----GKGSFGQVVKAYDRVEQEWVAIKII----KNKK 91
Query: 602 DAQRT-YREILFLKSFQRHP-----NIITMLD--IYKAVNNKDLYVVFEYMENDLNKVIR 653
E+ L+ +H I+ + +++ L +VFE + +L ++R
Sbjct: 92 AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR----NHLCLVFEMLSYNLYDLLR 147
Query: 654 D---KILKDVHIRYIMFQLCNGLSYIHA--CKVMHRDLKPSNILI--DKSCSIKIGDLGL 706
+ + + R Q+C L ++ ++H DLKP NIL+ K +IKI D G
Sbjct: 148 NTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG- 206
Query: 707 ARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGAST 766
S + + +YI +R+YR+PE+ + Y +D+WSLGCIL EM +PLF GA+
Sbjct: 207 --SSCQLGQRIYQYIQSRFYRSPEV-LLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 767 SHQLQLIVNLVRPNPPH 783
Q+ IV ++ P H
Sbjct: 264 VDQMNKIVEVLGIPPAH 280
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 158 bits (402), Expect = 7e-43
Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 19/228 (8%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI------FEAFRNKTDAQRTYRE 609
+ L+ + + K G GA G V A+++ + VAIK I + R A E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 610 ILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMF 667
I LK HP II + + + A +D Y+V E ME +L +KV+ +K LK+ + +
Sbjct: 66 IEILKKL-NHPCIIKIKNFFDA---EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 668 QLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATR 724
Q+ + Y+H ++HRDLKP N+L+ ++ C IKI D G ++ L ++ + T
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTP 180
Query: 725 WYRAPEIL--ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQL 770
Y APE+L + Y VD WSLG IL L P F T L
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 157 bits (398), Expect = 2e-42
Identities = 56/197 (28%), Positives = 106/197 (53%), Gaps = 7/197 (3%)
Query: 564 NLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNII 623
+ +K G+G+ GIV A +K++ + VA+K + R + + + E++ ++ +Q H N++
Sbjct: 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFNEVVIMRDYQ-HFNVV 105
Query: 624 TMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVM 682
M Y + ++L+V+ E+++ L ++ L + I + + L+Y+HA V+
Sbjct: 106 EMYKSY--LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVI 163
Query: 683 HRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHV 742
HRD+K +IL+ +K+ D G +S + T ++ APE+ IS Y V
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEV-ISRSLYATEV 222
Query: 743 DIWSLGCILAEMLQSKP 759
DIWSLG ++ EM+ +P
Sbjct: 223 DIWSLGIMVIEMVDGEP 239
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 155 bits (394), Expect = 3e-42
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 22/249 (8%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKS 615
+DL+ + E G+GAYG+V K + Q +A+K+I A N + +R ++
Sbjct: 7 DDLE----PIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMR 61
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRD-----KILKDVHIRYIMFQLC 670
P +T D+++ E M+ L+K + + + + + I +
Sbjct: 62 TVDCPFTVTFYGAL--FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 671 NGLSYIHA-CKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAP 729
L ++H+ V+HRD+KPSN+LI+ +K+ D G++ L D + Y AP
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI-DAGCKPYMAP 178
Query: 730 EILISNRR---YTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP--HA 784
E + Y+ DIWSLG + E+ + FP S Q + +V P A
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPSPQLPA 236
Query: 785 DKFYAGFKS 793
DKF A F
Sbjct: 237 DKFSAEFVD 245
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 155 bits (394), Expect = 4e-42
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 12/198 (6%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
GKG YGIVY D +N+ +AIK+I R+ +Q + EI K +H NI+ L
Sbjct: 31 GKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHL-KHKNIVQYLGS 87
Query: 629 YKAVNNKDLYVVFEYMEND-LNKVIRDK----ILKDVHIRYIMFQLCNGLSYIHACKVMH 683
+ N + + E + L+ ++R K + I + Q+ GL Y+H +++H
Sbjct: 88 FS--ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 684 RDLKPSNILID-KSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPE-ILISNRRYTHH 741
RD+K N+LI+ S +KI D G ++ L+ C + T Y APE I R Y
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 742 VDIWSLGCILAEMLQSKP 759
DIWSLGC + EM KP
Sbjct: 206 ADIWSLGCTIIEMATGKP 223
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 154 bits (392), Expect = 5e-42
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
GKG++ VY+A + VAIK I +A QR E+ +HP+I+ + +
Sbjct: 20 GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYN 78
Query: 628 IYKAVNNKDLYVVFEYMEN-DLNKVI--RDKILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
++ ++ +Y+V E N ++N+ + R K + R+ M Q+ G+ Y+H+ ++HR
Sbjct: 79 YFE--DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHR 136
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDI 744
DL SN+L+ ++ +IKI D GLA L E T Y +PEI + + D+
Sbjct: 137 DLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI-ATRSAHGLESDV 195
Query: 745 WSLGCILAEMLQSKPLF 761
WSLGC+ +L +P F
Sbjct: 196 WSLGCMFYTLLIGRPPF 212
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 156 bits (396), Expect = 5e-42
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G YG VYK Q AIK + + + ++ EI LK + H NI T
Sbjct: 33 GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ---EINMLKKYSHHRNIATYYGA 89
Query: 629 Y----KAVNNKDLYVVFEYME----NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACK 680
+ + L++V E+ DL K + LK+ I YI ++ GLS++H K
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 681 VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRR--- 737
V+HRD+K N+L+ ++ +K+ D G++ L + +I T ++ APE++ +
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDA 209
Query: 738 -YTHHVDIWSLGCILAEMLQSKP 759
Y D+WSLG EM + P
Sbjct: 210 TYDFKSDLWSLGITAIEMAEGAP 232
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 157 bits (399), Expect = 5e-42
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 25/241 (10%)
Query: 529 SSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQY 587
+ + + + + ++ Q+ + G+G +V + +
Sbjct: 62 NDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHE 121
Query: 588 VAIKKI------FEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVF 641
A+K + + + + T RE L+ HP+IIT++D Y+ ++ +++VF
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE--SSSFMFLVF 179
Query: 642 EYMEN-DLNKVIRDKILKDVHI-----RYIMFQLCNGLSYIHACKVMHRDLKPSNILIDK 695
+ M +L D + + V + R IM L +S++HA ++HRDLKP NIL+D
Sbjct: 180 DLMRKGEL----FDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235
Query: 696 SCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEIL-----ISNRRYTHHVDIWSLGCI 750
+ I++ D G + L E L E T Y APEIL ++ Y VD+W+ G I
Sbjct: 236 NMQIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI 294
Query: 751 L 751
L
Sbjct: 295 L 295
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 154 bits (392), Expect = 1e-41
Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 13/242 (5%)
Query: 561 QQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRH 619
+ L E G G G V+K + +A+K++ NK + +R ++ +
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQM-RRSGNKEENKRILMDLDVVLKSHDC 83
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYMEN--DLNKVIRDKILKDVHIRYIMFQLCNGLSYIH 677
P I+ + + N D+++ E M + K + + + + + L Y+
Sbjct: 84 PYIVQCFGTF--ITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK 141
Query: 678 AC-KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEIL---- 732
V+HRD+KPSNIL+D+ IK+ D G++ L D K Y APE +
Sbjct: 142 EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCAAYMAPERIDPPD 200
Query: 733 ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTS-HQLQLIVNLVRPNPPHADKFYAGF 791
+ Y D+WSLG L E+ + + T L ++ P P F F
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDF 260
Query: 792 KS 793
+S
Sbjct: 261 QS 262
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 158 bits (400), Expect = 1e-41
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 44/239 (18%)
Query: 548 SIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTY 607
+ +Q +K+ ++ + G G+ G V + VA+K++
Sbjct: 8 NFEQSLKNLVVSEKIL-----GYGSSGTVVFQGSFQGRP-VAVKRM-----LIDFCDIAL 56
Query: 608 REILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDK--------ILKD 659
EI L HPN+I ++ LY+ E +L ++ K + K+
Sbjct: 57 MEIKLLTESDDHPNVIRYYCSET--TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 660 VHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILID-------------KSCSIKIGDLGL 706
+ ++ Q+ +G++++H+ K++HRDLKP NIL+ ++ I I D GL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 707 ARSLSDSKECLTEYIATR----WYRAPEIL------ISNRRYTHHVDIWSLGCILAEML 755
+ L + + +RAPE+L + RR T +DI+S+GC+ +L
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 154 bits (391), Expect = 3e-41
Identities = 72/226 (31%), Positives = 106/226 (46%), Gaps = 24/226 (10%)
Query: 541 REVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRN 599
+ V + QL ++ + ++ G G+Y + + K A+K I ++
Sbjct: 2 QTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID---KS 58
Query: 600 KTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILK 658
K D EI L + +HPNIIT+ D+Y + K +YVV E M+ +L DKIL+
Sbjct: 59 KRDPTE---EIEILLRYGQHPNIITLKDVYD--DGKYVYVVTELMKGGEL----LDKILR 109
Query: 659 DVHI-----RYIMFQLCNGLSYIHACKVMHRDLKPSNILI----DKSCSIKIGDLGLARS 709
++F + + Y+HA V+HRDLKPSNIL SI+I D G A+
Sbjct: 110 QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169
Query: 710 LSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
L L T + APE+L + Y DIWSLG +L ML
Sbjct: 170 LRAENGLLMTPCYTANFVAPEVL-ERQGYDAACDIWSLGVLLYTML 214
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 152 bits (387), Expect = 4e-41
Identities = 65/320 (20%), Positives = 127/320 (39%), Gaps = 40/320 (12%)
Query: 521 MAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQ--QQINLLKEGKGAYGIVYK 578
M H + + + D + DL ++I G G++G V++
Sbjct: 1 MKHHHHHHPMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKI-----GAGSFGTVHR 55
Query: 579 AYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNK-DL 637
A + + VA+K + E + RE+ +K RHPNI+ AV +L
Sbjct: 56 A--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLF---MGAVTQPPNL 109
Query: 638 YVVFEYMEN-DLNKVIRDKILKDV----HIRYIMFQLCNGLSYIHACK--VMHRDLKPSN 690
+V EY+ L +++ ++ + + + G++Y+H ++HR+LK N
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPN 169
Query: 691 ILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCI 750
+L+DK ++K+ D GL+R + + T + APE+ + + D++S G I
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV-LRDEPSNEKSDVYSFGVI 228
Query: 751 LAEMLQSKPLFPGASTSHQLQLIVNLV----RPN-PPHADKFYAGF------KSKHEREK 799
L E+ + + + Q++ + R P + + A +R
Sbjct: 229 LWELATLQQPWGNL---NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPS 285
Query: 800 FNQVVVKCQKELQELQSQVV 819
F ++ L+ L V
Sbjct: 286 FATIM----DLLRPLIKSAV 301
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 155 bits (393), Expect = 5e-41
Identities = 49/240 (20%), Positives = 91/240 (37%), Gaps = 18/240 (7%)
Query: 555 DREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLK 614
+ + ++ +G V A K +YV +++I + E+ K
Sbjct: 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSK 81
Query: 615 SFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN----DLNKVIRDKILKDVHIRYIMFQLC 670
F HPNI+ + + + +L+VV +M DL + ++ I YI+ +
Sbjct: 82 LF-NHPNIVPYRATF--IADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138
Query: 671 NGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDS-------KECLTEYIAT 723
L YIH +HR +K S+ILI + + L S+ + +
Sbjct: 139 KALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV 198
Query: 724 RWYRAPEILISNRR-YTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP 782
+ +PE+L N + Y DI+S+G E+ F Q+++ + P
Sbjct: 199 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF---KDMPATQMLLEKLNGTVP 255
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 151 bits (384), Expect = 6e-41
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF--EAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
GKG +G VY A +K +K +A+K +F + + + Q RE+ RHPNI+ +
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ-LRREVEIQSHL-RHPNILRLY 75
Query: 627 DIYKAVNNKDLYVVFEYMEN-DLNKVIR-DKILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
+ + +Y++ EY + + ++ + + +L N LSY H+ +V+HR
Sbjct: 76 GYFH--DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHR 133
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKE---CLT-EYIATRWYRAPEILISNRRYTH 740
D+KP N+L+ + +KI D G + S+ C T +Y+ PE+ I R +
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYL------PPEM-IEGRMHDE 186
Query: 741 HVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPH 783
VD+WSLG + E L KP F + + I + P
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 229
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 152 bits (386), Expect = 9e-41
Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 21/196 (10%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+G++ I K K + Q A+K I +K T +EI LK + HPNI+ + ++
Sbjct: 20 GEGSFSICRKCVHKKSNQAFAVKII-----SKRMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 629 YKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI-----RYIMFQLCNGLSYIHACKVM 682
+ + ++V E + +L ++I K H YIM +L + +S++H V+
Sbjct: 75 FH--DQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVV 128
Query: 683 HRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT 739
HRDLKP N+L + + IKI D G AR + L T Y APE+L + Y
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQNGYD 187
Query: 740 HHVDIWSLGCILAEML 755
D+WSLG IL ML
Sbjct: 188 ESCDLWSLGVILYTML 203
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 150 bits (381), Expect = 2e-40
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKS 615
++ +E GKGA+ +V + K A K I + D Q+ RE +
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI-----RYIMFQL 669
Q HPNI+ + D + Y+VF+ + +L + I+ + + Q+
Sbjct: 62 LQ-HPNIVRLHDSIQ--EESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQI 114
Query: 670 CNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWY 726
++Y H+ ++HR+LKP N+L+ K ++K+ D GLA ++DS E + T Y
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGY 173
Query: 727 RAPEILISNRRYTHHVDIWSLGCIL 751
+PE+L Y+ VDIW+ G IL
Sbjct: 174 LSPEVL-KKDPYSKPVDIWACGVIL 197
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 152 bits (385), Expect = 2e-40
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 24/254 (9%)
Query: 555 DREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLK 614
EDL+ + G+GAYG V K K + Q +A+K+I + ++ + ++ ++ +
Sbjct: 20 TAEDLKDLGEI---GRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVM 75
Query: 615 SFQRHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRD------KILKDVHIRYIMFQ 668
P I+ D ++ E M +K + ++ + + I
Sbjct: 76 RSSDCPYIVQFYGAL--FREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 669 LCNGLSYIHA-CKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYR 727
L+++ K++HRD+KPSNIL+D+S +IK+ D G++ L DS T R Y
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK-TRDAGCRPYM 192
Query: 728 APEILISNRR---YTHHVDIWSLGCILAEMLQSKPLFPGASTSH-QLQLIVNLVRPNP-- 781
APE + + Y D+WSLG L E+ + +P ++ QL +V P
Sbjct: 193 APERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDPPQL 250
Query: 782 --PHADKFYAGFKS 793
+F F +
Sbjct: 251 SNSEEREFSPSFIN 264
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 150 bits (382), Expect = 2e-40
Identities = 56/220 (25%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 542 EVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNK 600
+ + + + D ++ L++ GKG++G V+K D ++ VAIK I + +
Sbjct: 3 HSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAE 61
Query: 601 TDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKD 659
+ + +EI L P + Y + + L+++ EY+ ++ L +
Sbjct: 62 DEIEDIQQEITVLSQC-DSPYVTKYYGSY--LKDTKLWIIMEYLGGGSALDLLEPGPLDE 118
Query: 660 VHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTE 719
I I+ ++ GL Y+H+ K +HRD+K +N+L+ + +K+ D G+A L+D++
Sbjct: 119 TQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178
Query: 720 YIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKP 759
++ T ++ APE+ I Y DIWSLG E+ + +P
Sbjct: 179 FVGTPFWMAPEV-IKQSAYDSKADIWSLGITAIELARGEP 217
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 152 bits (386), Expect = 2e-40
Identities = 70/302 (23%), Positives = 118/302 (39%), Gaps = 60/302 (19%)
Query: 521 MAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAY 580
M H S +E+L G + V + L+ + + +++ G G +G V
Sbjct: 1 MHHHHHHSSGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKM-----GDGTFGRVLLCQ 55
Query: 581 DKNNKQYVAIKKIFEAFRNKTDAQRTYR-----EILFLKSFQRHP----NIITMLD--IY 629
+NK+Y A+K + RN + Y E LK Q NI+ +Y
Sbjct: 56 HIDNKKYYAVKVV----RNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107
Query: 630 KAVNNKDLYVVFEYMENDLNKVIRD---KILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
+ ++FE + L ++I I+ ++ L+Y+ + H DL
Sbjct: 108 Y----DHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDL 163
Query: 687 KPSNILI-------------------------DKSCSIKIGDLGLARSLSDSKECLTEYI 721
KP NIL+ KS IK+ D G + + I
Sbjct: 164 KPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG---CATFKSDYHGSII 220
Query: 722 ATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNP 781
TR YRAPE+++ N + D+WS GC+LAE+ LF L ++ ++++P P
Sbjct: 221 NTRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIP 279
Query: 782 PH 783
+
Sbjct: 280 KN 281
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 150 bits (380), Expect = 2e-40
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 20/227 (8%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKS 615
++ N++ GKG++G V K D+ +Q A+K I +A D RE+ LK
Sbjct: 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK 77
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVH-----IRYIMFQL 669
HPNI+ + +I + ++ Y+V E +L D+I+K I+ Q+
Sbjct: 78 LD-HPNIMKLFEILE--DSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQV 130
Query: 670 CNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWY 726
+G++Y+H ++HRDLKP NIL+ +K C IKI D GL+ + + + I T +Y
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYY 189
Query: 727 RAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLI 773
APE+L Y D+WS G IL +L P F G + L+ +
Sbjct: 190 IAPEVL--RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 152 bits (387), Expect = 2e-40
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRT-YREILFLK-------SFQRHP 620
G G + V+ A D N +VA+K + R EI L+ + +
Sbjct: 28 GWGHFSTVWLAKDMVNNTHVAMKIV----RGDKVYTEAAEDEIKLLQRVNDADNTKEDSM 83
Query: 621 ---NIITMLD--IYKAVNNKDLYVVFEYMENDLNKVIR---DKILKDVHIRYIMFQLCNG 672
+I+ +LD +K N + +VFE + +L +I+ + + ++++ I QL G
Sbjct: 84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG 143
Query: 673 LSYIHA-CKVMHRDLKPSNILIDKSCS------IKIGDLGLARSLSDSKECLTEYIATRW 725
L Y+H C ++H D+KP N+L++ S IKI DLG A E T I TR
Sbjct: 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYDEHYTNSIQTRE 200
Query: 726 YRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTS------HQLQLIVNLVRP 779
YR+PE+L+ + DIWS C++ E++ LF + I+ L+
Sbjct: 201 YRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
Query: 780 NPPH 783
P +
Sbjct: 260 LPSY 263
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 150 bits (380), Expect = 2e-40
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 17/229 (7%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKS 615
+ ++ G GA+G V+ ++++ IK I + R++ ++ EI LKS
Sbjct: 18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD-RSQVPMEQIEAEIEVLKS 76
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVH-----IRYIMFQL 669
HPNII + ++++ + ++Y+V E E +L + I + + +M Q+
Sbjct: 77 LD-HPNIIKIFEVFE--DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 670 CNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWY 726
N L+Y H+ V+H+DLKP NIL IKI D GLA + T T Y
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-STNAAGTALY 192
Query: 727 RAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
APE+ R T DIWS G ++ +L F G S Q
Sbjct: 193 MAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY 239
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 151 bits (382), Expect = 4e-40
Identities = 63/292 (21%), Positives = 115/292 (39%), Gaps = 56/292 (19%)
Query: 537 NGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIF- 594
+ ++++ +LQ++ +L G+G+YG+V A + + AIK +
Sbjct: 2 HHHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNK 61
Query: 595 --EAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME------- 645
N D +R E+ +K HPNI + ++Y+ + + + +V E
Sbjct: 62 NKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYE--DEQYICLVMELCHGGHLLDK 118
Query: 646 -----------------------------------NDLNKVIRDKILKDVHIRYIMFQLC 670
+ D + ++ I IM Q+
Sbjct: 119 LNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178
Query: 671 NGLSYIHACKVMHRDLKPSNILI--DKSCSIKIGDLGLARSLSDSKECLTEYIATR---- 724
+ L Y+H + HRD+KP N L +KS IK+ D GL++ + T+
Sbjct: 179 SALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTP 238
Query: 725 WYRAPEIL-ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
++ APE+L +N Y D WS G +L +L FPG + + + ++N
Sbjct: 239 YFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN 290
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 151 bits (383), Expect = 5e-40
Identities = 71/321 (22%), Positives = 128/321 (39%), Gaps = 32/321 (9%)
Query: 510 KTMKELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEG 569
K ++ELEL + + + L K E+ +D ++ L G
Sbjct: 2 KKLEELELDE-----QQRKRLEAFLTQKQKVGELKD-----------DDFEKISEL---G 42
Query: 570 KGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIY 629
G G+V+K K + +A K I + RE+ L P I+ +
Sbjct: 43 AGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAF 100
Query: 630 KAVNNKDLYVVFEYMEND-LNKVIRD-KILKDVHIRYIMFQLCNGLSYIHA-CKVMHRDL 686
++ ++ + E+M+ L++V++ + + + + + GL+Y+ K+MHRD+
Sbjct: 101 --YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWS 746
KPSNIL++ IK+ D G++ L DS + ++ TR Y +PE + Y+ DIWS
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSGQLIDSM-ANS-FVGTRSYMSPER-LQGTHYSVQSDIWS 215
Query: 747 LGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYAGFKSKHEREKFNQVVVK 806
+G L EM + P + V + + + +
Sbjct: 216 MGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD---SR 272
Query: 807 CQKELQELQSQVVEENTSKLK 827
+ EL +V E KL
Sbjct: 273 PPMAIFELLDYIVNEPPPKLP 293
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 149 bits (379), Expect = 5e-40
Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 546 KKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQ 604
K + ++ D + ++ E G GA+G VYKA +K A K I +++ + +
Sbjct: 4 KSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELE 61
Query: 605 RTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME----NDLNKVIRDKILKDV 660
EI L + HP I+ +L Y ++ L+++ E+ + + D+ L +
Sbjct: 62 DYIVEIEILATCD-HPYIVKLLGAY--YHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEP 117
Query: 661 HIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEY 720
I+ + Q+ L+++H+ +++HRDLK N+L+ I++ D G++ + + +
Sbjct: 118 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177
Query: 721 IATRWYRAPEILISNRR----YTHHVDIWSLGCILAEMLQSKP 759
I T ++ APE+++ Y + DIWSLG L EM Q +P
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 150 bits (380), Expect = 5e-40
Identities = 54/284 (19%), Positives = 96/284 (33%), Gaps = 73/284 (25%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIK------------------------------KIFEAFR 598
G+G +G+V++A +K + AIK + F A+
Sbjct: 15 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWL 74
Query: 599 NKTDAQRTYREILFLKSFQRHPNII-----------------------TMLDIYKAVNNK 635
+ + + T+ + +
Sbjct: 75 ETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKV 134
Query: 636 DLYVVFEYMEN-DLNKVIRDKILKDV----HIRYIMFQLCNGLSYIHACKVMHRDLKPSN 690
LY+ + +L + + + +I Q+ + ++H+ +MHRDLKPSN
Sbjct: 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN 194
Query: 691 ILIDKSCSIKIGDLGLARSLSDSKEC------------LTEYIATRWYRAPEILISNRRY 738
I +K+GD GL ++ +E T + T+ Y +PE + Y
Sbjct: 195 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI-HGNNY 253
Query: 739 THHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP 782
+H VDI+SLG IL E+L + + NL P
Sbjct: 254 SHKVDIFSLGLILFELLY--SFSTQMERVRIITDVRNLKFPLLF 295
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 157 bits (398), Expect = 8e-40
Identities = 96/542 (17%), Positives = 188/542 (34%), Gaps = 44/542 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G +G V + ++ + VAIK + + +R EI +K HPN+++ ++
Sbjct: 23 GTGGFGYVLRWIHQDTGEQVAIK-QCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREV 80
Query: 629 Y----KAVNNKDLYVVFEYMEN-DLNKVI----RDKILKDVHIRYIMFQLCNGLSYIHAC 679
K N + EY E DL K + LK+ IR ++ + + L Y+H
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 680 KVMHRDLKPSNILIDKSCS---IKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNR 736
+++HRDLKP NI++ KI DLG A+ L E TE++ T Y APE+ + +
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPEL-LEQK 198
Query: 737 RYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYAG-FKSKH 795
+YT VD WS G + E + F Q V G K
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS 258
Query: 796 EREKFNQVVVKCQKELQELQSQVVEENTSK--LKLQMELDSKDSEIEQLQGK--LAALGS 851
N + +L+ ++ + + Q ++ + L+ +
Sbjct: 259 VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKLLSVMNM 318
Query: 852 ETASLSSADVENDESYVQDSRL-----------------EGWVSIPNKQNIKRHGWKKQY 894
+ + + V +E+ G + +
Sbjct: 319 VSGRVHTYPVTENENLQNLKSWLQQDTGIPEEEQELLQASGLALNSAQPLTQYVIDCTVI 378
Query: 895 VVVSSKKIIFYNSENDKQNTDPELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQ 954
+ + + +N K +P++ L L + L+ R V + +
Sbjct: 379 DGRQGEGDLIFLFDNRKTVYEPQISLPAHPESVSIVLQDPKRPLTYTHLRRV-WGQIWQT 437
Query: 955 LMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDIN 1014
+ +ED + + + + + E+ K + E ++ +
Sbjct: 438 IRALKEDCARLLQGQRTSMVNLLRYNTELSKKKNSMTSECEQLKAKLDFFRSSIQIDLEK 497
Query: 1015 TTCKGKSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSK 1074
+ + + +S + +E + + +ERE V ++ LQ+ V+ +
Sbjct: 498 YSEQMEFGITSEKLLSAWREMEQAVELCGRERE-----VQALVDKMMALQTDSVDLQRNP 552
Query: 1075 LK 1076
L
Sbjct: 553 LG 554
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 148 bits (375), Expect = 1e-39
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 32/232 (13%)
Query: 555 DREDLQQQIN---LLKE-GKGAYGIVYKAYDKNNKQYVAIKKI----------------- 593
Q+N L E GKG+YG+V AY++N+ Y A+K +
Sbjct: 4 GSSGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPP 63
Query: 594 -------FEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN 646
+ + ++ Y+EI LK HPN++ ++++ N LY+VFE +
Sbjct: 64 RGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQ 122
Query: 647 -DLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLG 705
+ +V K L + R+ L G+ Y+H K++HRD+KPSN+L+ + IKI D G
Sbjct: 123 GPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 706 LARSLSDSKECLTEYIATRWYRAPEILISNRRYTH--HVDIWSLGCILAEML 755
++ S L+ + T + APE L R+ +D+W++G L +
Sbjct: 183 VSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 147 bits (373), Expect = 1e-39
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 554 KDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILF 612
+ D+ Q L G+G++G V A K + A KKI D R +EI
Sbjct: 2 STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEI 59
Query: 613 LKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI-----RYIM 666
+KS HPNII + + ++ +N D+Y+V E +L ++++ IM
Sbjct: 60 MKSLD-HPNIIRLYETFE--DNTDIYLVMELCTGGEL----FERVVHKRVFRESDAARIM 112
Query: 667 FQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIAT 723
+ + ++Y H V HRDLKP N L +K+ D GLA K + + T
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKVGT 171
Query: 724 RWYRAPEILISNRRYTHHVDIWSLGCIL 751
+Y +P++L Y D WS G ++
Sbjct: 172 PYYVSPQVL--EGLYGPECDEWSAGVMM 197
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 149 bits (378), Expect = 2e-39
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 58/288 (20%)
Query: 569 GKGAYGIVYKAYD-KNNKQYVAIKKIFEAFRNKTDAQRTYR-----EILFLKSFQRH--- 619
G+GA+G V + D K ++VA+K + +N Y EI L+
Sbjct: 23 GEGAFGKVVECIDHKAGGRHVAVKIV----KNV----DRYCEAARSEIQVLEHLNTTDPN 74
Query: 620 --PNIITMLD--IYKAVNNKDLYVVFEYMENDLNKVIRD---KILKDVHIRYIMFQLCNG 672
+ ML+ + + +VFE + I++ + HIR + +Q+C
Sbjct: 75 STFRCVQMLEWFEHH----GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 673 LSYIHACKVMHRDLKPSNILID-------------------KSCSIKIGDLGLARSLSDS 713
++++H+ K+ H DLKP NIL + IK+ D G S +
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG---SATYD 187
Query: 714 KECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLI 773
E + ++TR YRAPE+ I ++ D+WS+GCIL E +FP + L ++
Sbjct: 188 DEHHSTLVSTRHYRAPEV-ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246
Query: 774 VNLVRPNPPH-------ADKFYAGFKSKHEREKFNQVVVKCQKELQEL 814
++ P P H F+ E + V + K L+E
Sbjct: 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEF 294
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 152 bits (387), Expect = 2e-39
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 552 LMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYRE 609
+ + + GKG++G V DK Q A+K I + KTD + RE
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 610 ILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDKILKDVH-----IR 663
+ LK HPNI+ + + ++ + Y+V E +L D+I+
Sbjct: 77 VQLLKQLD-HPNIMKLYEFFE--DKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAA 129
Query: 664 YIMFQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEY 720
I+ Q+ +G++Y+H K++HRDLKP N+L+ K +I+I D GL+ SK+ + +
Sbjct: 130 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDK 188
Query: 721 IATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
I T +Y APE+L + Y D+WS G IL +L P F GA+ L+ +
Sbjct: 189 IGTAYYIAPEVL--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK 241
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 148 bits (375), Expect = 2e-39
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 564 NLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNII 623
L K G+G+YG VYKA K Q VAIK++ ++D Q +EI ++ P+++
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQEIIKEISIMQQC-DSPHVV 87
Query: 624 TMLDIYKAVNNKDLYVVFEYME----NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHAC 679
Y N DL++V EY +D+ ++ R+K L + I I+ GL Y+H
Sbjct: 88 KYYGSY--FKNTDLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 680 KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT 739
+ +HRD+K NIL++ K+ D G+A L+D+ I T ++ APE+ I Y
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV-IQEIGYN 203
Query: 740 HHVDIWSLGCILAEMLQSKP 759
DIWSLG EM + KP
Sbjct: 204 CVADIWSLGITAIEMAEGKP 223
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 153 bits (388), Expect = 2e-39
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 20/234 (8%)
Query: 552 LMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREI 610
+ + L + +K+ G GAYG V DK AIK I + + + + E+
Sbjct: 28 ITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEV 87
Query: 611 LFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDKILKDVH-----IRY 664
LK HPNI+ + D ++ + ++ Y+V E + +L D+I+ +
Sbjct: 88 AVLKLLD-HPNIMKLYDFFE--DKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAV 140
Query: 665 IMFQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYI 721
I+ Q+ +G++Y+H ++HRDLKP N+L+ +K IKI D GL+ + K+ + E +
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERL 199
Query: 722 ATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
T +Y APE+L ++Y D+WS+G IL +L P F G + L+ +
Sbjct: 200 GTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK 251
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 149 bits (377), Expect = 2e-39
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 29/244 (11%)
Query: 550 DQLMKDREDLQQQINLLKE--GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTY 607
+ + L K+ G G G V + + + Q A+K + D+ +
Sbjct: 17 QGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL-------YDSPKAR 69
Query: 608 REILFLKSFQRHPNIITMLDIY--KAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRY 664
+E+ P+I+ +LD+Y + L ++ E ME +L +I + +
Sbjct: 70 QEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGEL----FSRIQERGDQAF 125
Query: 665 -------IMFQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSK 714
IM + + ++H+ + HRD+KP N+L +K +K+ D G A+ + +
Sbjct: 126 TEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA 185
Query: 715 ECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIV 774
L T +Y APE+L +Y D+WSLG I+ +L P F + +
Sbjct: 186 --LQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK 242
Query: 775 NLVR 778
+R
Sbjct: 243 RRIR 246
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 148 bits (376), Expect = 3e-39
Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 18/280 (6%)
Query: 526 SDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNN 584
+ ++ S+ R++D K I ++ E + + E G+GAYG+V K +
Sbjct: 16 PKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPS 75
Query: 585 KQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYM 644
Q +A+K+I A N + +R ++ P +T D+++ E M
Sbjct: 76 GQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL--FREGDVWICMELM 132
Query: 645 ENDLNKVIRD-----KILKDVHIRYIMFQLCNGLSYIHA-CKVMHRDLKPSNILIDKSCS 698
+ L+K + + + + + I + L ++H+ V+HRD+KPSN+LI+
Sbjct: 133 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ 192
Query: 699 IKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRR---YTHHVDIWSLGCILAEML 755
+K+ D G++ L DS T + Y APE + Y+ DIWSLG + E+
Sbjct: 193 VKMCDFGISGYLVDSVAK-TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
Query: 756 QSKPLFPGASTSHQLQLIVNLVRPNPP--HADKFYAGFKS 793
+ FP S Q + +V P ADKF A F
Sbjct: 252 ILR--FPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD 289
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 146 bits (371), Expect = 5e-39
Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 23/265 (8%)
Query: 529 SSKESLLSNGKEREVDYKKSIDQLMKDREDLQ--QQINLLKEGKGAYGIVYKAYDKNNKQ 586
K R + S + ++ +I G G++G VYK +
Sbjct: 8 HHHHGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRI-----GSGSFGTVYKGKWHGD-- 60
Query: 587 YVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN 646
VA+K + Q E+ L+ RH NI+ + +L +V ++ E
Sbjct: 61 -VAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILL---FMGYMTKDNLAIVTQWCEG 115
Query: 647 -DLNKVIRDK--ILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGD 703
L K + + + + I Q G+ Y+HA ++HRD+K +NI + + ++KIGD
Sbjct: 116 SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGD 175
Query: 704 LGLARSLSDSKECLTEYIATRWYR--APEIL--ISNRRYTHHVDIWSLGCILAEMLQSKP 759
GLA S T APE++ N ++ D++S G +L E++ +
Sbjct: 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 760 LFPGASTSHQ--LQLIVNLVRPNPP 782
+ + Q + P+
Sbjct: 236 PYSHINNRDQIIFMVGRGYASPDLS 260
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 151 bits (383), Expect = 6e-39
Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 20/240 (8%)
Query: 546 KKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQ 604
S + + + ++ N++ GKG++G V K D+ +Q A+K I +A D
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS 66
Query: 605 RTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDKILKDVH-- 661
RE+ LK HPNI+ + +I + ++ Y+V E +L D+I+K
Sbjct: 67 TILREVELLKKLD-HPNIMKLFEILE--DSSSFYIVGELYTGGEL----FDEIIKRKRFS 119
Query: 662 ---IRYIMFQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKE 715
I+ Q+ +G++Y+H ++HRDLKP NIL+ +K C IKI D GL+ +
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-T 178
Query: 716 CLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
+ + I T +Y APE+L Y D+WS G IL +L P F G + L+ +
Sbjct: 179 KMKDRIGTAYYIAPEVL--RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET 236
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 145 bits (369), Expect = 7e-39
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 43/271 (15%)
Query: 532 ESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIK 591
S + + +++ + ++QI GKG +G+V+K +K VAIK
Sbjct: 5 GSEFPKSRLPTLAD----NEI-----EYEKQI-----GKGGFGLVHKGRLVKDKSVVAIK 50
Query: 592 KIF-EAFRNKTDAQRTY----REILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN 646
+ +T+ + RE+ + + HPNI+ + + + +V E++
Sbjct: 51 SLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLY----GLMHNPPRMVMEFVPC 105
Query: 647 -DLNKVIRDK--ILKDVHIRYIMFQLCNGLSYIHACK--VMHRDLKPSNILIDKS----- 696
DL + DK +K +M + G+ Y+ ++HRDL+ NI +
Sbjct: 106 GDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAP 165
Query: 697 CSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILI-SNRRYTHHVDIWSLGCILAEML 755
K+ D GL++ S ++ + + APE + YT D +S IL +L
Sbjct: 166 VCAKVADFGLSQQSVHS---VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
Query: 756 QSKPLFPGASTSHQLQLIVNLV----RPNPP 782
+ F S +++ I + RP P
Sbjct: 223 TGEGPFDEYSYG-KIKFINMIREEGLRPTIP 252
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 145 bits (368), Expect = 9e-39
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF--EAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
GKG +G VY A +K NK +A+K +F + + + Q REI RHPNI+ M
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ-LRREIEIQSHL-RHPNILRMY 80
Query: 627 DIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
+ + + K +Y++ E+ +L ++ + + M +L + L Y H KV+HR
Sbjct: 81 NYFH--DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR 138
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKE---CLT-EYIATRWYRAPEILISNRRYTH 740
D+KP N+L+ +KI D G + + C T +Y+ PE+ I + +
Sbjct: 139 DIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYL------PPEM-IEGKTHDE 191
Query: 741 HVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPH 783
VD+W G + E L P F S + + IVN+ PP
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 147 bits (373), Expect = 9e-39
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEA---FRNKTDAQRTYREILFLKSFQRHPNIITM 625
GKG + +V + ++ Q A+K + A + RE + HP+I+ +
Sbjct: 33 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVEL 91
Query: 626 LDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI---------RYIMFQLCNGLSY 675
L+ Y ++ LY+VFE+M+ DL +I+K + M Q+ L Y
Sbjct: 92 LETYS--SDGMLYMVFEFMDGADL----CFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 676 IHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEIL 732
H ++HRD+KP +L+ + S +K+G G+A L +S + T + APE++
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 733 ISNRRYTHHVDIWSLGCIL 751
Y VD+W G IL
Sbjct: 206 -KREPYGKPVDVWGCGVIL 223
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 146 bits (371), Expect = 1e-38
Identities = 66/211 (31%), Positives = 114/211 (54%), Gaps = 15/211 (7%)
Query: 556 REDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI-FEAFRNKTDAQRTYREILFL 613
++D ++ + L+E G G++G VY A D N + VAIKK+ + ++ Q +E+ FL
Sbjct: 49 KDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 108
Query: 614 KSFQRHPNIITMLDIYKAVNNKDLYVVFEYME---NDLNKVIRDKILKDVHIRYIMFQLC 670
+ RHPN I Y + ++V EY +DL +V K L++V I +
Sbjct: 109 QKL-RHPNTIQYRGCY--LREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGAL 164
Query: 671 NGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPE 730
GL+Y+H+ ++HRD+K NIL+ + +K+GD G A ++ + ++ T ++ APE
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN----SFVGTPYWMAPE 220
Query: 731 ILISNRR--YTHHVDIWSLGCILAEMLQSKP 759
++++ Y VD+WSLG E+ + KP
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELAERKP 251
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 145 bits (368), Expect = 1e-38
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKI-FEAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G GA +V AY K+ VAIK+I E + +T +EI + HPNI++
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRINLE--KCQTSMDELLKEIQAMSQC-HHPNIVSYYT 80
Query: 628 IYKAVNNKDLYVVFEYME----NDLNKVI------RDKILKDVHIRYIMFQLCNGLSYIH 677
+ V +L++V + + D+ K I + +L + I I+ ++ GL Y+H
Sbjct: 81 SF--VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 678 ACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTE-----YIATRWYRAPEIL 732
+HRD+K NIL+ + S++I D G++ L+ + ++ T + APE++
Sbjct: 139 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 733 ISNRRYTHHVDIWSLGCILAEMLQSKP 759
R Y DIWS G E+
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAA 225
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 147 bits (372), Expect = 1e-38
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 546 KKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQ 604
+ + +M ++ +E GKGA+ +V + K A K I + D Q
Sbjct: 14 GRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ 73
Query: 605 RTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI- 662
+ RE + Q HPNI+ + D + Y+VF+ + +L + I+
Sbjct: 74 KLEREARICRKLQ-HPNIVRLHDSIQ--EESFHYLVFDLVTGGEL----FEDIVAREFYS 126
Query: 663 ----RYIMFQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKE 715
+ + Q+ ++Y H+ ++HR+LKP N+L+ K ++K+ D GLA ++DS E
Sbjct: 127 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-E 185
Query: 716 CLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCIL 751
+ T Y +PE+L Y+ VDIW+ G IL
Sbjct: 186 AWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVIL 220
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 145 bits (369), Expect = 3e-38
Identities = 74/288 (25%), Positives = 116/288 (40%), Gaps = 58/288 (20%)
Query: 569 GKGAYGIVYKAYD-KNNKQYVAIKKIFEAFRNKTDAQRTYR-----EILFLKSFQRH--- 619
G+G +G V + D K VA+K I RN YR EI LK +
Sbjct: 28 GEGTFGKVVECLDHARGKSQVALKII----RNV----GKYREAARLEINVLKKIKEKDKE 79
Query: 620 --PNIITMLD--IYKAVNNKDLYVVFEYMENDLNKVIRD---KILKDVHIRYIMFQLCNG 672
+ M D + + + FE + + + +++ + H+R++ +QLC+
Sbjct: 80 NKFLCVLMSDWFNFH----GHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135
Query: 673 LSYIHACKVMHRDLKPSNILI-------------------DKSCSIKIGDLGLARSLSDS 713
L ++H ++ H DLKP NIL K+ SI++ D G S +
Sbjct: 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATFD 192
Query: 714 KECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLI 773
E T +ATR YR PE+ I + D+WS+GCIL E + LF L ++
Sbjct: 193 HEHHTTIVATRHYRPPEV-ILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251
Query: 774 VNLVRPNPPH-------ADKFYAGFKSKHEREKFNQVVVKCQKELQEL 814
++ P P H FY G E + V + K L+
Sbjct: 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSY 299
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 144 bits (366), Expect = 4e-38
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 28/203 (13%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+GA+ V + Q A+K I + R +RE+ L Q H N++ +++
Sbjct: 22 GEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 629 YKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI-----RYIMFQLCNGLSYIHACKVM 682
++ Y+VFE M + I K H ++ + + L ++H +
Sbjct: 80 FE--EEDRFYLVFEKMRGGSI----LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 683 HRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKEC-------LTEYIATRWYRAPEIL 732
HRDLKP NIL ++ +KI D L + + +C L + Y APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 733 ----ISNRRYTHHVDIWSLGCIL 751
Y D+WSLG IL
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVIL 216
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 144 bits (366), Expect = 4e-38
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 554 KDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI----FEAFRNKTDAQRTYR 608
KDRE + + L GKG +G V+ + ++ VAIK I + +D+
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 609 EILFLK---SFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN--DL-NKVIRDKILKDVHI 662
E+ L + HP +I +LD ++ + +V E DL + + L +
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFE--TQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS 141
Query: 663 RYIMFQLCNGLSYIHACKVMHRDLKPSNILID-KSCSIKIGDLGLARSLSDSKECLTEYI 721
R Q+ + + H+ V+HRD+K NILID + K+ D G L D T++
Sbjct: 142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--YTDFD 199
Query: 722 ATRWYRAPEILISNRRYT-HHVDIWSLGCILAEML 755
TR Y PE IS +Y +WSLG +L +M+
Sbjct: 200 GTRVYSPPEW-ISRHQYHALPATVWSLGILLYDMV 233
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 144 bits (365), Expect = 5e-38
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 16/243 (6%)
Query: 524 HRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDK 582
H SS + D + K++E L+ Q + G G +G VY
Sbjct: 6 HHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRV 65
Query: 583 NNKQYVAIKKI----FEAFRNKTDAQRTYREILFLKSFQ-RHPNIITMLDIYKAVNNKDL 637
++ VAIK + + + R E++ LK +I +LD ++
Sbjct: 66 SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE--RPDSF 123
Query: 638 YVVFEYMEN--DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILID 694
++ E E DL + + L++ R +Q+ + + H C V+HRD+K NILID
Sbjct: 124 VLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 183
Query: 695 -KSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT-HHVDIWSLGCILA 752
+K+ D G L D+ T++ TR Y PE I RY +WSLG +L
Sbjct: 184 LNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEW-IRYHRYHGRSAAVWSLGILLY 240
Query: 753 EML 755
+M+
Sbjct: 241 DMV 243
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 147 bits (373), Expect = 6e-38
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKS 615
++ L +E GKGA+ +V + Q A I + D Q+ RE +
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI-----RYIMFQL 669
+ HPNI+ + D Y++F+ + +L + I+ + + + Q+
Sbjct: 67 LK-HPNIVRLHDSIS--EEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQI 119
Query: 670 CNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWY 726
+ + H V+HR+LKP N+L+ K ++K+ D GLA + ++ + T Y
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 179
Query: 727 RAPEILISNRRYTHHVDIWSLGCIL 751
+PE+L Y VD+W+ G IL
Sbjct: 180 LSPEVL-RKDPYGKPVDLWACGVIL 203
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 143 bits (363), Expect = 6e-38
Identities = 67/307 (21%), Positives = 118/307 (38%), Gaps = 43/307 (14%)
Query: 561 QQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRH 619
++I + + G+GA+G+V KA K + VAIK+I ++++ + E+ L H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRV-NH 60
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK----ILKDVHIRYIMFQLCNGLS 674
PNI+ + + +V EY E L V+ H Q G++
Sbjct: 61 PNIVKLY----GACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 675 YIHACK---VMHRDLKPSNILIDKS-CSIKIGDLGLARSLSDSKECLTEYIATRWYRAPE 730
Y+H+ + ++HRDLKP N+L+ +KI D G A + +T + + APE
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPE 173
Query: 731 ILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQ--LQLIVNLVRPN-PPHADKF 787
+ Y+ D++S G IL E++ + F + + N RP + K
Sbjct: 174 V-FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP 232
Query: 788 YAGF------KSKHEREKFNQVVVKCQKELQELQSQVVEENT-----SKLKLQMELDSKD 836
K +R ++V K + L + + L D +
Sbjct: 233 IESLMTRCWSKDPSQRPSMEEIV----KIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRV 288
Query: 837 SEIEQLQ 843
Sbjct: 289 EPYVDFA 295
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 143 bits (362), Expect = 6e-38
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 558 DLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI----FEAFRNKTDAQRTYREILF 612
++ + +E G G + IV K K + A K I + R + RE+
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 613 LKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLC 670
L+ + HPNIIT+ DI++ N D+ ++ E + +L + + + L + + Q+
Sbjct: 62 LREIR-HPNIITLHDIFE--NKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 118
Query: 671 NGLSYIHACKVMHRDLKPSNILI----DKSCSIKIGDLGLARSLSDSKECLTEYIATRWY 726
+G+ Y+H+ ++ H DLKP NI++ + IK+ D G+A + E T +
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEF 177
Query: 727 RAPEILISNRRYTHHVDIWSLGCIL 751
APEI+ + D+WS+G I
Sbjct: 178 VAPEIV-NYEPLGLEADMWSIGVIT 201
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 143 bits (362), Expect = 7e-38
Identities = 62/293 (21%), Positives = 115/293 (39%), Gaps = 37/293 (12%)
Query: 546 KKSIDQLMKDREDLQ--QQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDA 603
+ + D + Q+I G G++G VYK + VA+K +
Sbjct: 13 RDAADDWEIPDGQITVGQRI-----GSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQL 64
Query: 604 QRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK--ILKDV 660
Q E+ L+ RH NI+ L +V ++ E L + +
Sbjct: 65 QAFKNEVGVLRKT-RHVNILLF---MGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMK 120
Query: 661 HIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEY 720
+ I Q G+ Y+HA ++HRDLK +NI + + ++KIGD GLA S
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 721 IATRWYR--APEIL--ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQL--QLIV 774
+ APE++ + Y+ D+++ G +L E++ + + + Q+ +
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
Query: 775 NLVRPN----PPHADKFYAGF------KSKHEREKFNQVVVKCQKELQELQSQ 817
+ P+ + K K + ER F +++ E++EL +
Sbjct: 241 GSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL----AEIEELARE 289
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 146 bits (369), Expect = 8e-38
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 28/245 (11%)
Query: 522 AKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE--GKGAYGIVYKA 579
L + ++ L + + + + G G G V +
Sbjct: 22 QPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQI 81
Query: 580 YDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIY--KAVNNKDL 637
++K ++ A+K + D + RE+ + P+I+ ++D+Y K L
Sbjct: 82 FNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134
Query: 638 YVVFEYMEN-DLNKVIRDKILKDVHIRY-------IMFQLCNGLSYIHACKVMHRDLKPS 689
+V E ++ +L +I + IM + + Y+H+ + HRD+KP
Sbjct: 135 LIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 190
Query: 690 NILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWS 746
N+L + +K+ D G A+ + LT T +Y APE+L +Y D+WS
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVL-GPEKYDKSCDMWS 248
Query: 747 LGCIL 751
LG I+
Sbjct: 249 LGVIM 253
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 143 bits (363), Expect = 9e-38
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI----FEAFRNKTDAQRTYREIL 611
+ ++ ++ +E G G + IV K +K+ A K I A R + RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 612 FLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQL 669
L+ H N+IT+ D+Y+ N D+ ++ E + +L + + + + L + + Q+
Sbjct: 68 ILRQVL-HHNVITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 670 CNGLSYIHACKVMHRDLKPSNILI----DKSCSIKIGDLGLARSLSDSKECLTEYIATRW 725
+G++Y+H K+ H DLKP NI++ IK+ D GLA + D E T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPE 183
Query: 726 YRAPEILISNRRYTHHVDIWSLGCIL 751
+ APEI+ + D+WS+G I
Sbjct: 184 FVAPEIV-NYEPLGLEADMWSIGVIT 208
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 146 bits (369), Expect = 9e-38
Identities = 42/298 (14%), Positives = 94/298 (31%), Gaps = 41/298 (13%)
Query: 525 RSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNN 584
S+ +SL+S ++ + +R + +L G+ +A D+
Sbjct: 46 EYMQSAADSLVSTSLWNT-GQPFRVESELGERPRTLVRGTVL--GQEDPYAYLEATDQET 102
Query: 585 KQYVAIKKIFEAFRNKTDA-QRTYREILFLKSF---------QRHPNIITMLDIYKAVNN 634
+ + + R ++A ++ E+L L+ + H I D+ K
Sbjct: 103 GESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162
Query: 635 KDL---------------YVVFEYMENDLNKVIR--------DKILKDVHIRYIMFQLCN 671
K + + ++ M+++L K L + Q+
Sbjct: 163 KKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIR 222
Query: 672 GLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECL-TEYIATRWYRAPE 730
L+ +H ++H L+P +I++D+ + + S A A
Sbjct: 223 LLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAER 282
Query: 731 ILISNR----RYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHA 784
+L + T D W+LG + + + + + I + P
Sbjct: 283 MLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPV 340
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 147 bits (374), Expect = 1e-37
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 23/241 (9%)
Query: 552 LMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI-----------FEAFRN 599
+ K + + +++ G GAYG V +KN AIK I +
Sbjct: 27 VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 600 KTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME--NDLNKVIRDKIL 657
+ + Y EI LKS HPNII + D+++ + K Y+V E+ E ++I
Sbjct: 87 EKFHEEIYNEISLLKSLD-HPNIIKLFDVFE--DKKYFYLVTEFYEGGELFEQIINRHKF 143
Query: 658 KDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSK 714
+ IM Q+ +G+ Y+H ++HRD+KP NIL+ + +IKI D GL+ S
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 715 ECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIV 774
+ L + + T +Y APE+L ++Y D+WS G I+ +L P F G + ++ +
Sbjct: 204 K-LRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260
Query: 775 N 775
Sbjct: 261 K 261
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 142 bits (359), Expect = 4e-37
Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 550 DQLMKDREDLQQQINLLKE--GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTY 607
+ + E+ L + G+G + +V + K+ Q A K + + R +
Sbjct: 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL 76
Query: 608 REILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRY-- 664
EI L+ + P +I + ++Y+ N ++ ++ EY ++ L ++
Sbjct: 77 HEIAVLELAKSCPRVINLHEVYE--NTSEIILILEYAAGGEI----FSLCLPELAEMVSE 130
Query: 665 -----IMFQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKEC 716
++ Q+ G+ Y+H ++H DLKP NIL+ IKI D G++R + + E
Sbjct: 131 NDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE- 189
Query: 717 LTEYIATRWYRAPEILISNRRYTHHVDIWSLGCIL 751
L E + T Y APEIL + T D+W++G I
Sbjct: 190 LREIMGTPEYLAPEIL-NYDPITTATDMWNIGIIA 223
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 140 bits (356), Expect = 5e-37
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKS 615
++++ ++ G GA+ V+ + + A+K I EI LK
Sbjct: 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIAVLKK 62
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHI-----RYIMFQL 669
+ H NI+T+ DIY+ + Y+V + + +L D+IL+ ++ Q+
Sbjct: 63 IK-HENIVTLEDIYE--STTHYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQV 115
Query: 670 CNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWY 726
+ + Y+H ++HRDLKP N+L +++ I I D GL++ + ++ T Y
Sbjct: 116 LSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MSTACGTPGY 173
Query: 727 RAPEILISNRRYTHHVDIWSLGCIL 751
APE+L + + Y+ VD WS+G I
Sbjct: 174 VAPEVL-AQKPYSKAVDCWSIGVIT 197
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 139 bits (352), Expect = 8e-37
Identities = 45/274 (16%), Positives = 101/274 (36%), Gaps = 29/274 (10%)
Query: 561 QQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRH 619
+Q+N L + + G ++K + + +K + + ++ E L+ F H
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQG--NDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SH 66
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD---KILKDVHIRYIMFQLCNGLSY 675
PN++ +L ++ ++ +M L V+ + ++ + G+++
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 676 IHACK--VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILI 733
+H + + L +++ID+ + +I + S W APE L
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYA----PAWV-APEALQ 181
Query: 734 SNR--RYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNL-VRPN-PPHADKFYA 789
D+WS +L E++ + F S + +RP PP +
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVS 241
Query: 790 GF------KSKHEREKFNQVVVKCQKELQELQSQ 817
+ +R KF+ +V L+++Q +
Sbjct: 242 KLMKICMNEDPAKRPKFDMIV----PILEKMQDK 271
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 141 bits (357), Expect = 2e-36
Identities = 30/259 (11%), Positives = 75/259 (28%), Gaps = 47/259 (18%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIK-----------------------KIFEAFRNKTDAQR 605
G+ +A D+ + + ++ +N+ A+
Sbjct: 82 GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV 141
Query: 606 TYREILFLKSFQR--HPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVI--------RDK 655
R I + +I + + + + ++ M+++L K
Sbjct: 142 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201
Query: 656 ILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKE 715
L + Q+ L+ +H ++H L+P +I++D+ + +
Sbjct: 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVV 261
Query: 716 CLTEYIATRWYRAPEILISN----------RRYTHHVDIWSLGCILAEMLQSKPLFPGAS 765
+R + PE+ T D W+LG ++ + + +
Sbjct: 262 SSV----SRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDA 317
Query: 766 TSHQLQLIVNLVRPNPPHA 784
+ I + P
Sbjct: 318 ALGGSEWIFRSCKNIPQPV 336
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 140 bits (354), Expect = 2e-36
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 556 REDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI----FEAFRNKTDAQRTYREI 610
+E++ + +E G G + +V K +K+ A K I ++ R + RE+
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 611 LFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME-NDL-NKVIRDKILKDVHIRYIMFQ 668
LK Q HPN+IT+ ++Y+ N D+ ++ E + +L + + + L + + Q
Sbjct: 66 SILKEIQ-HPNVITLHEVYE--NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 669 LCNGLSYIHACKVMHRDLKPSNILI----DKSCSIKIGDLGLARSLSDSKECLTEYIATR 724
+ NG+ Y+H+ ++ H DLKP NI++ IKI D GLA + E T
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTP 181
Query: 725 WYRAPEILISNRRYTHHVDIWSLGCIL 751
+ APEI+ + D+WS+G I
Sbjct: 182 EFVAPEIV-NYEPLGLEADMWSIGVIT 207
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 138 bits (349), Expect = 2e-36
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 555 DREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTY-REILF 612
D +L + + G G +G VY+A VA+K + + + +E
Sbjct: 5 DFAELTLEEII---GIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 613 LKSFQRHPNIITMLDIYKAVNNKD-LYVVFEYMEN-DLNKVIRDKILKDVHIRYIMFQLC 670
+HPNII + + L +V E+ LN+V+ K + + Q+
Sbjct: 60 FAML-KHPNIIAL---RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIA 115
Query: 671 NGLSYIHACK---VMHRDLKPSNILIDKSCS--------IKIGDLGLARSLSDSKECLTE 719
G++Y+H ++HRDLK SNILI + +KI D GLAR +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT--KMS 173
Query: 720 YIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPG 763
+ APE+ I ++ D+WS G +L E+L + F G
Sbjct: 174 AAGAYAWMAPEV-IRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 139 bits (351), Expect = 3e-36
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 36/251 (14%)
Query: 555 DREDLQQQINLLKE--GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTY-REIL 611
DL E GKG +G K + + + +K++ R + QRT+ +E+
Sbjct: 8 RPSDLI-----HGEVLGKGCFGQAIKVTHRETGEVMVMKELI---RFDEETQRTFLKEVK 59
Query: 612 FLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK--ILKDVHIRYIMFQ 668
++ HPN++ + + +K L + EY++ L +I+
Sbjct: 60 VMRCL-EHPNVLKFIGV--LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKD 116
Query: 669 LCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT----- 723
+ +G++Y+H+ ++HRDL N L+ ++ ++ + D GLAR + D K +
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 724 ----------RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQ--LQ 771
W APE+ I+ R Y VD++S G +L E++ P
Sbjct: 177 KKRYTVVGNPYWM-APEM-INGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL 234
Query: 772 LIVNLVRPNPP 782
+ + P
Sbjct: 235 NVRGFLDRYCP 245
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 139 bits (353), Expect = 3e-36
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 8/218 (3%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
GKG + V A + VAIK I + N T Q+ +RE+ +K HPNI+ + ++
Sbjct: 24 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEV 82
Query: 629 YKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
+ K LY++ EY ++ + ++ +K+ R Q+ + + Y H +++HRDL
Sbjct: 83 IE--TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDL 140
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT-HHVDIW 745
K N+L+D +IKI D G + + L + Y APE L ++Y VD+W
Sbjct: 141 KAENLLLDADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPE-LFQGKKYDGPEVDVW 198
Query: 746 SLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPH 783
SLG IL ++ F G + + ++ P +
Sbjct: 199 SLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 236
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 140 bits (354), Expect = 3e-36
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKI----FEAFRNKTDAQRTYREIL 611
+ ++ ++ +E G G + IV K +K+ A K I A R + RE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 612 FLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQL 669
L+ HPNIIT+ D+Y+ N D+ ++ E + +L + + + + L + + Q+
Sbjct: 68 ILRQVL-HPNIITLHDVYE--NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 670 CNGLSYIHACKVMHRDLKPSNILI----DKSCSIKIGDLGLARSLSDSKECLTEYIATRW 725
+G++Y+H K+ H DLKP NI++ IK+ D GLA + D E T
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPE 183
Query: 726 YRAPEILISNRRYTHHVDIWSLGCIL 751
+ APEI+ + D+WS+G I
Sbjct: 184 FVAPEIV-NYEPLGLEADMWSIGVIT 208
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 139 bits (353), Expect = 3e-36
Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 523 KHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYD 581
S S+ ++ +R+ L + E G+GA IVY+
Sbjct: 15 TENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQ 74
Query: 582 KNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVF 641
K ++ A+K + + D + EI L HPNII + +I++ ++ +V
Sbjct: 75 KGTQKPYALKVL----KKTVDKKIVRTEIGVLLRLS-HPNIIKLKEIFE--TPTEISLVL 127
Query: 642 EYME-NDLNKVIRDKILKDVHI-----RYIMFQLCNGLSYIHACKVMHRDLKPSNILI-- 693
E + +L D+I++ + + Q+ ++Y+H ++HRDLKP N+L
Sbjct: 128 ELVTGGEL----FDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYAT 183
Query: 694 -DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCIL 751
+KI D GL++ + + T Y APEIL Y VD+WS+G I
Sbjct: 184 PAPDAPLKIADFGLSKIVEHQ-VLMKTVCGTPGYCAPEIL-RGCAYGPEVDMWSVGIIT 240
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 138 bits (349), Expect = 5e-36
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEA--FRNKTDAQRTYREILFLKSFQRHPNIITML 626
G+G+YG V + D A+K + + R +EI L+ RH N+I ++
Sbjct: 14 GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLV 72
Query: 627 DIYKAVNNKDLYVVFEYMEND----LNKVIRDKILKDVHIRYIMF-QLCNGLSYIHACKV 681
D+ + +Y+V EY L+ V + Y F QL +GL Y+H+ +
Sbjct: 73 DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY--FCQLIDGLEYLHSQGI 130
Query: 682 MHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATR----WYRAPEILISNRR 737
+H+D+KP N+L+ ++KI LG+A +L + T ++ PEI
Sbjct: 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA--DDTCRTSQGSPAFQPPEIANGLDT 188
Query: 738 YT-HHVDIWSLGCILAEML 755
++ VDIWS G L +
Sbjct: 189 FSGFKVDIWSAGVTLYNIT 207
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 139 bits (351), Expect = 7e-36
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 36/215 (16%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF---------------EAFRNKTDAQRTYREILFL 613
+G + + + + ++ A+KK + K+ E+ +
Sbjct: 40 NQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 614 KSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-----------DLNKVIRDKILKDVHI 662
++ +T I N ++Y+++EYMEN L+K I V
Sbjct: 98 TDI-KNEYCLTCEGIIT--NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK 154
Query: 663 RYIMFQLCNGLSYIHACK-VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYI 721
I + N SYIH K + HRD+KPSNIL+DK+ +K+ D G + + D K +
Sbjct: 155 CII-KSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK--IKGSR 211
Query: 722 ATRWYRAPEILISNRRY-THHVDIWSLGCILAEML 755
T + PE + Y VDIWSLG L M
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 137 bits (348), Expect = 8e-36
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 32/250 (12%)
Query: 555 DREDLQ--QQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILF 612
E L+ + I GKG +G VY VAI+ I N+ + RE++
Sbjct: 31 PFEQLEIGELI-----GKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMA 82
Query: 613 LKSFQRHPNIITMLDIYKAVNNK-DLYVVFEYMEN-DLNKVIRDK--ILKDVHIRYIMFQ 668
+ RH N++ A + L ++ + L V+RD +L R I +
Sbjct: 83 YRQT-RHENVVLF---MGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQE 138
Query: 669 LCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLAR-----SLSDSKECLTEYIAT 723
+ G+ Y+HA ++H+DLK N+ D + I D GL ++ L
Sbjct: 139 IVKGMGYLHAKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGW 197
Query: 724 RWYRAPEIL--------ISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
+ APEI+ ++ H D+++LG I E+ + F + +
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGT 257
Query: 776 LVRPNPPHAD 785
++PN
Sbjct: 258 GMKPNLSQIG 267
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 136 bits (344), Expect = 1e-35
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G G +G V + VA+K + + R+ + REI LK F RHP+II +
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQ 78
Query: 628 IYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
+ D ++V EY+ +L + + + ++++ R + Q+ + + Y H V+HRD
Sbjct: 79 VIS--TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRD 136
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT-HHVDI 744
LKP N+L+D + KI D GL+ ++ E L + Y APE+ IS R Y VDI
Sbjct: 137 LKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRTSCGSPNYAAPEV-ISGRLYAGPEVDI 194
Query: 745 WSLGCILAEML 755
WS G IL +L
Sbjct: 195 WSCGVILYALL 205
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 136 bits (344), Expect = 1e-35
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 8/190 (4%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G+G++ V AY Q VA+K I + R REI +L+ RHP+II + D
Sbjct: 22 GEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYD 80
Query: 628 IYKAVNNKDLYVVFEYMENDL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
+ K + ++ +V EY N+L + +++ + + R Q+ + + Y H K++HRDL
Sbjct: 81 VIK--SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDL 138
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT-HHVDIW 745
KP N+L+D+ ++KI D GL+ ++ L + Y APE+ IS + Y VD+W
Sbjct: 139 KPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVDVW 196
Query: 746 SLGCILAEML 755
S G IL ML
Sbjct: 197 SCGVILYVML 206
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 141 bits (358), Expect = 3e-35
Identities = 49/249 (19%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Query: 509 EKTMKELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 568
++ + S + ++ + + + + ++ +E
Sbjct: 105 DERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEE 164
Query: 569 -GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G GA+G+V++ ++ A K + +++D + +EI + + HP ++ + D
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLR-HPTLVNLHD 221
Query: 628 IYKAVNNKDLYVVFEYMEN-DL-NKVIRDK-ILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
++ ++ ++ +++E+M +L KV + + + M Q+C GL ++H +H
Sbjct: 222 AFE--DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHL 279
Query: 685 DLKPSNILI--DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHV 742
DLKP NI+ +S +K+ D GL L D K+ + T + APE+ + ++
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVA-EGKPVGYYT 337
Query: 743 DIWSLGCIL 751
D+WS+G +
Sbjct: 338 DMWSVGVLS 346
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 134 bits (339), Expect = 8e-35
Identities = 48/244 (19%), Positives = 89/244 (36%), Gaps = 49/244 (20%)
Query: 550 DQLMKDREDLQQQINLLKE--GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTY 607
L + + + + G G G V + ++K ++ A+K + D +
Sbjct: 6 SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKAR 58
Query: 608 REILFLKSFQRHPNIITMLDIY--KAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRY 664
RE+ + P+I+ ++D+Y K L +V E ++ +L +I +
Sbjct: 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAF 114
Query: 665 -------IMFQLCNGLSYIHACKVMHRDLKPSNILI---DKSCSIKIGDLGLARSLSDSK 714
IM + + Y+H+ + HRD+KP N+L + +K+ D G
Sbjct: 115 TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-------- 166
Query: 715 ECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIV 774
A E +Y D+WSLG I+ +L P F +
Sbjct: 167 -------------AKETT--GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 211
Query: 775 NLVR 778
+R
Sbjct: 212 TRIR 215
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 134 bits (339), Expect = 9e-35
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 561 QQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRH 619
+ I LL+ GKG YG V++ + VA+K R++ R E+ RH
Sbjct: 8 RDITLLECVGKGRYGEVWRG--SWQGENVAVKIFSS--RDEKSWFRE-TELYNTVML-RH 61
Query: 620 PNIITML--DIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRYIMFQLCNGLSYI 676
NI+ + D+ ++ L+++ Y E L ++ L V I+ + +GL+++
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 121
Query: 677 HA--------CKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECL----TEYIATR 724
H + HRDLK NIL+ K+ I DLGLA S S L + T+
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 725 WYRAPEIL-----ISNRRYTHHVDIWSLGCILAEML 755
Y APE+L + VDIW+ G +L E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 135 bits (341), Expect = 1e-34
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKI------FEAFRNKTDAQRTYREILFLKSFQRHPNI 622
G GA+G V+ A DK + V +K I + + + EI L H NI
Sbjct: 33 GSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANI 91
Query: 623 ITMLDIYKAVNNKDLYVVFEYMEN--DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHAC 679
I +LDI++ N +V E + DL + R L + YI QL + + Y+
Sbjct: 92 IKVLDIFE--NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 680 KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT 739
++HRD+K NI+I + +IK+ D G A + + + + T Y APE+ + Y
Sbjct: 150 DIIHRDIKDENIVIAEDFTIKLIDFGSA-AYLERGKLFYTFCGTIEYCAPEV-LMGNPYR 207
Query: 740 -HHVDIWSLGCIL 751
+++WSLG L
Sbjct: 208 GPELEMWSLGVTL 220
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 133 bits (336), Expect = 1e-34
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+GAYG V A ++ ++ VA+K I + R + +EI K H N++
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKML-NHENVVKFYGH 73
Query: 629 YKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
+ Y+ EY +L +++ D + + + QL G+ Y+H + HRD+
Sbjct: 74 RR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSD--SKECLTEYIATRWYRAPEILISNRRYT-HHVD 743
KP N+L+D+ ++KI D GLA + L + T Y APE+ + R + VD
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL-LKRREFHAEPVD 190
Query: 744 IWSLGCILAEML 755
+WS G +L ML
Sbjct: 191 VWSCGIVLTAML 202
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 136 bits (344), Expect = 1e-34
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 536 SNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIF 594
+ ++ K + + + ++L+E G GA+G+V++ +K + K I
Sbjct: 26 YDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI- 84
Query: 595 EAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME-NDLNKVIR 653
D EI + HP +I + D ++ + ++ ++ E++ +L
Sbjct: 85 -NTPYPLDKYTVKNEISIMNQLH-HPKLINLHDAFE--DKYEMVLILEFLSGGEL----F 136
Query: 654 DKILKDVH------IRYIMFQLCNGLSYIHACKVMHRDLKPSNILI--DKSCSIKIGDLG 705
D+I + + + M Q C GL ++H ++H D+KP NI+ K+ S+KI D G
Sbjct: 137 DRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFG 196
Query: 706 LARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCIL 751
LA L+ + + AT + APEI+ + D+W++G +
Sbjct: 197 LATKLNPDEI-VKVTTATAEFAAPEIV-DREPVGFYTDMWAIGVLG 240
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 133 bits (336), Expect = 4e-34
Identities = 48/205 (23%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKS 615
++L ++ + ++ G+G +GIV++ + ++K+ K + TD +EI L
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK---VKGTDQVLVKKEISILNI 57
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDKIL-KDVH-----IRYIMFQ 668
+ H NI+ + + ++ + ++L ++FE++ D+ ++I I + Q
Sbjct: 58 AR-HRNILHLHESFE--SMEELVMIFEFISGLDI----FERINTSAFELNEREIVSYVHQ 110
Query: 669 LCNGLSYIHACKVMHRDLKPSNILI--DKSCSIKIGDLGLARSLSDSKECLTEYIATRWY 726
+C L ++H+ + H D++P NI+ +S +IKI + G AR L + Y
Sbjct: 111 VCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-KPGDNFRLLFTAPEY 169
Query: 727 RAPEILISNRRYTHHVDIWSLGCIL 751
APE+ + + D+WSLG ++
Sbjct: 170 YAPEVH-QHDVVSTATDMWSLGTLV 193
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 133 bits (337), Expect = 6e-34
Identities = 41/246 (16%), Positives = 92/246 (37%), Gaps = 34/246 (13%)
Query: 544 DYKKSIDQL--MKDREDLQQQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFE 595
+++ + + + + + + + G+GA+ VY+A D NKQ +K
Sbjct: 46 EWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP 105
Query: 596 AFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-------DL 648
A N + + + LK + + + +V E +L
Sbjct: 106 A--NPWEFYIGTQLMERLKP-SMQHMFMKFYSAH--LFQNGSVLVGELYSYGTLLNAINL 160
Query: 649 NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILI-----------DKSC 697
K +K++ + ++ + +H C+++H D+KP N ++ D S
Sbjct: 161 YKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220
Query: 698 SIKIGDLGLARSLS--DSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+ + DLG + + T T ++ E+L SN+ + + +D + + + ML
Sbjct: 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML-SNKPWNYQIDYFGVAATVYCML 279
Query: 756 QSKPLF 761
+
Sbjct: 280 FGTYMK 285
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 131 bits (332), Expect = 8e-34
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 27/218 (12%)
Query: 559 LQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQ 617
+ + I L + GKG +G V++ K + VA+K R + R EI
Sbjct: 1 IARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSS--REERSWFRE-AEIYQTVML- 54
Query: 618 RHPNIITML--DIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRYIMFQLCNGLS 674
RH NI+ + D L++V +Y E+ L + + + + +GL+
Sbjct: 55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA 114
Query: 675 YIHA--------CKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIA---- 722
++H + HRDLK NIL+ K+ + I DLGLA + + +
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 723 TRWYRAPEIL-----ISNRRYTHHVDIWSLGCILAEML 755
T+ Y APE+L + + DI+++G + E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 132 bits (334), Expect = 1e-33
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 8/190 (4%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G+G++G V A +Q VA+K I + + R REI +LK RHP+II + D
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYD 76
Query: 628 IYKAVNNKDLYVVFEYMENDL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
+ D+ +V EY +L + ++ K + + R Q+ + Y H K++HRDL
Sbjct: 77 VIT--TPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDL 134
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT-HHVDIW 745
KP N+L+D + ++KI D GL+ ++D L + Y APE+ I+ + Y VD+W
Sbjct: 135 KPENLLLDDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEV-INGKLYAGPEVDVW 192
Query: 746 SLGCILAEML 755
S G +L ML
Sbjct: 193 SCGIVLYVML 202
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 132 bits (335), Expect = 1e-33
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G +G+ DK K+ VA+K E R + REI+ +S RHPNI+ ++
Sbjct: 29 GSGNFGVARLMRDKLTKELVAVK-YIE--RGAAIDENVQREIINHRSL-RHPNIVRFKEV 84
Query: 629 YKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
L ++ EY +L ++ + R+ QL +G+SY H+ ++ HRDL
Sbjct: 85 IL--TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDL 142
Query: 687 KPSNILIDKSCS--IKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT-HHVD 743
K N L+D S + +KI D G + S + T Y APE+ + + Y D
Sbjct: 143 KLENTLLDGSPAPRLKICDFGYS-KSSVLHSQPKSTVGTPAYIAPEV-LLRQEYDGKIAD 200
Query: 744 IWSLGCILAEML 755
+WS G L ML
Sbjct: 201 VWSCGVTLYVML 212
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 131 bits (331), Expect = 2e-33
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+GAYG V A ++ ++ VA+K I + R + +EI K H N++
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKML-NHENVVKFYGH 73
Query: 629 YKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
+ Y+ EY +L +++ D + + + QL G+ Y+H + HRD+
Sbjct: 74 RR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSD--SKECLTEYIATRWYRAPEILISNRRYT-HHVD 743
KP N+L+D+ ++KI D GLA + L + T Y APE+ + R + VD
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL-LKRREFHAEPVD 190
Query: 744 IWSLGCILAEML 755
+WS G +L ML
Sbjct: 191 VWSCGIVLTAML 202
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 131 bits (331), Expect = 2e-33
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 561 QQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRH 619
+QI ++K+ GKG YG V+ K + VA+K F + R EI RH
Sbjct: 37 KQIQMVKQIGKGRYGEVWMG--KWRGEKVAVKVFFT--TEEASWFRE-TEIYQTVLM-RH 90
Query: 620 PNIITML--DIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRYIMFQLCNGLSYI 676
NI+ + DI + LY++ +Y EN L ++ L + + + +GL ++
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 677 HA--------CKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEY----IATR 724
H + HRDLK NIL+ K+ + I DLGLA + + T+
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210
Query: 725 WYRAPEIL-----ISNRRYTHHVDIWSLGCILAEML 755
Y PE+L ++ + D++S G IL E+
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 132 bits (333), Expect = 2e-33
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 20/192 (10%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G G +G V+K + +A K I R D + EI + H N+I + D
Sbjct: 98 GGGRFGQVHKCEETATGLKLAAKII--KTRGMKDKEEVKNEISVMNQLD-HANLIQLYDA 154
Query: 629 YKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVH------IRYIMFQLCNGLSYIHACKV 681
++ + D+ +V EY++ +L D+I+ + + M Q+C G+ ++H +
Sbjct: 155 FE--SKNDIVLVMEYVDGGEL----FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI 208
Query: 682 MHRDLKPSNILI--DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT 739
+H DLKP NIL + IKI D GLAR +E L T + APE++ + +
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRY-KPREKLKVNFGTPEFLAPEVV-NYDFVS 266
Query: 740 HHVDIWSLGCIL 751
D+WS+G I
Sbjct: 267 FPTDMWSVGVIA 278
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 130 bits (329), Expect = 4e-33
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 27/220 (12%)
Query: 557 EDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKS 615
+ + I L + GKG +G V++ K + VA+K R + R EI
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSS--REERSWFRE-AEIYQTVM 92
Query: 616 FQRHPNIITML--DIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRYIMFQLCNG 672
RH NI+ + D L++V +Y E+ L + + + + +G
Sbjct: 93 L-RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 151
Query: 673 LSYIHA--------CKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIA-- 722
L+++H + HRDLK NIL+ K+ + I DLGLA + + +
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 211
Query: 723 --TRWYRAPEIL-----ISNRRYTHHVDIWSLGCILAEML 755
T+ Y APE+L + + DI+++G + E+
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 126 bits (318), Expect = 6e-32
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQR---------H 619
G+G G VY+A D ++ VA+K + E + D F QR
Sbjct: 43 GRGGMGDVYEAEDTVRERIVALKLMSETLSS--DPV-------FRTRMQREARTAGRLQE 93
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDK-ILKDVHIRYIMFQLCNGLSYIH 677
P+++ + D + LYV + DL ++R + L I+ Q+ + L H
Sbjct: 94 PHVVPIHDF--GEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH 151
Query: 678 ACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTE---YIATRWYRAPEILIS 734
A HRD+KP NIL+ + D G+A + +D K LT+ + T +Y APE S
Sbjct: 152 AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK--LTQLGNTVGTLYYMAPE-RFS 208
Query: 735 NRRYTHHVDIWSLGCILAEMLQSKPLFPGASTS 767
T+ DI++L C+L E L P + G S
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQGDQLS 241
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 125 bits (317), Expect = 7e-32
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 31/218 (14%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNKTDAQRT--Y 607
+ L+ L++ GKG +G V N + VA+KK+ ++ T+
Sbjct: 8 EERHLK----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL----QHSTEEHLRDFE 59
Query: 608 REILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD--KILKDVHIRY 664
REI LKS +H NI+ + + ++L ++ EY+ L ++ + + + +
Sbjct: 60 REIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 665 IMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT- 723
Q+C G+ Y+ + +HRDL NIL++ +KIGD GL + L KE +
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF---FKVKE 175
Query: 724 ------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
WY APE ++ +++ D+WS G +L E+
Sbjct: 176 PGESPIFWY-APES-LTESKFSVASDVWSFGVVLYELF 211
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 130 bits (328), Expect = 7e-32
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G G +G V + VA+K + + R+ + REI LK F RHP+II +
Sbjct: 25 GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQ 83
Query: 628 IYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
+ D+++V EY+ +L + + ++ L + R + Q+ +G+ Y H V+HRD
Sbjct: 84 VIS--TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRD 141
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYT-HHVDI 744
LKP N+L+D + KI D GL+ ++ E L + Y APE+ IS R Y VDI
Sbjct: 142 LKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRTSCGSPNYAAPEV-ISGRLYAGPEVDI 199
Query: 745 WSLGCILAEML 755
WS G IL +L
Sbjct: 200 WSSGVILYALL 210
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 125 bits (317), Expect = 1e-31
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 26/225 (11%)
Query: 545 YKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNK 600
++ D + + L++ +L G+G +G V + + VA+K + +
Sbjct: 19 FQGPGDPTVFHKRYLKKIRDL---GEGHFGKVSLYCYDPTNDGTGEMVAVKALKA---DA 72
Query: 601 TDAQRT--YREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKIL 657
R+ +EI L++ H +II + L +V EY+ L + +
Sbjct: 73 GPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSI 131
Query: 658 KDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECL 717
+ Q+C G++Y+HA +HRDL N+L+D +KIGD GLA+++ + E
Sbjct: 132 GLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE-- 189
Query: 718 TEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
Y WY APE + ++ + D+WS G L E+L
Sbjct: 190 -YYRVREDGDSPVFWY-APEC-LKEYKFYYASDVWSFGVTLYELL 231
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 125 bits (317), Expect = 1e-31
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 555 DREDLQQQINLLKEGKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNKTDAQRTY-RE 609
+ L+ L GKG +G V N VA+K++ + D QR + RE
Sbjct: 21 EERHLKYISQL---GKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQRE 74
Query: 610 ILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK--ILKDVHIRYIM 666
I LK+ I+ + + L +V EY+ + L ++ L +
Sbjct: 75 IQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 133
Query: 667 FQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT--- 723
Q+C G+ Y+ + + +HRDL NIL++ +KI D GLA+ L K+ Y+
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD---YYVVREPG 190
Query: 724 ----RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
WY APE +S+ ++ D+WS G +L E+
Sbjct: 191 QSPIFWY-APES-LSDNIFSRQSDVWSFGVVLYELF 224
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 125 bits (316), Expect = 2e-31
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 31/218 (14%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNKTDAQRT--Y 607
+ L+ L++ GKG +G V N + VA+KK+ ++ T+
Sbjct: 39 EERHLK----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL----QHSTEEHLRDFE 90
Query: 608 REILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD--KILKDVHIRY 664
REI LKS +H NI+ + + ++L ++ EY+ L ++ + + + +
Sbjct: 91 REIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 149
Query: 665 IMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT- 723
Q+C G+ Y+ + +HRDL NIL++ +KIGD GL + L KE Y
Sbjct: 150 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE---YYKVKE 206
Query: 724 ------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
WY APE ++ +++ D+WS G +L E+
Sbjct: 207 PGESPIFWY-APES-LTESKFSVASDVWSFGVVLYELF 242
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 123 bits (310), Expect = 6e-31
Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 542 EVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAY----DKNNKQYVAIKKIFEA 596
E +D ++ L+ +++ G+G +G V N + VA+K +
Sbjct: 6 EKKPATEVDPTHFEKRFLK----RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKP- 60
Query: 597 FRNKTDAQRT--YREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR 653
+EI L++ H NI+ I + ++ E++ + L + +
Sbjct: 61 --ESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP 117
Query: 654 D--KILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLS 711
+ Q+C G+ Y+ + + +HRDL N+L++ +KIGD GL +++
Sbjct: 118 KNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
Query: 712 DSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
KE Y WY APE + ++ D+WS G L E+L
Sbjct: 178 TDKE---YYTVKDDRDSPVFWY-APEC-LMQSKFYIASDVWSFGVTLHELL 223
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 121 bits (305), Expect = 3e-30
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 33/232 (14%)
Query: 549 IDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYR 608
I +++ +R + ++ G G VY A D VAIK IF R +
Sbjct: 5 IGKIINERYKIVDKL-----GGGGMSTVYLAEDTILNIKVAIKAIFIPPRE--KEE---- 53
Query: 609 EILFLKSFQR---------HPNIITMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDK-IL 657
LK F+R H NI++M+D+ + Y+V EY+E L++ I L
Sbjct: 54 ---TLKRFEREVHNSSQLSHQNIVSMIDV--DEEDDCYYLVMEYIEGPTLSEYIESHGPL 108
Query: 658 KDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECL 717
Q+ +G+ + H +++HRD+KP NILID + ++KI D G+A++LS++ L
Sbjct: 109 SVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS--L 166
Query: 718 TE---YIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGAST 766
T+ + T Y +PE DI+S+G +L EML +P F G +
Sbjct: 167 TQTNHVLGTVQYFSPE-QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 121 bits (305), Expect = 4e-30
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 31/234 (13%)
Query: 548 SIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTY 607
+ + DR +L + + G G V+ A D + + VA+K + D
Sbjct: 5 TTPSHLSDRYELGEIL-----GFGGMSEVHLARDLRDHRDVAVKVLRADLAR--DPS--- 54
Query: 608 REILFLKSFQR---------HPNIITMLDIYKAVNNKDL--YVVFEYME-NDLNKVIRDK 655
F F+R HP I+ + D +A Y+V EY++ L ++ +
Sbjct: 55 ----FYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE 110
Query: 656 -ILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSK 714
+ ++ C L++ H ++HRD+KP+NI+I + ++K+ D G+AR+++DS
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 715 ECLTE---YIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGAS 765
+T+ I T Y +PE D++SLGC+L E+L +P F G S
Sbjct: 171 NSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 120 bits (304), Expect = 4e-30
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIK-----KIFEAFRNKTDAQRTYREILFLKSFQRHPNII 623
G+G++ V A + + AIK I + NK R+++ S HP +
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRHIIK--ENKVPYVTRERDVM---SRLDHPFFV 93
Query: 624 TMLDIYKAVNNKDLYVVFEYMEN-DLNKVI-RDKILKDVHIRYIMFQLCNGLSYIHACKV 681
+ ++ +++ LY Y +N +L K I + + R+ ++ + L Y+H +
Sbjct: 94 KLYFTFQ--DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 682 MHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKE-------CLT-EYIATRWYRAPEILI 733
+HRDLKP NIL+++ I+I D G A+ LS + T +Y+ +PE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV------SPELL- 204
Query: 734 SNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADK 786
+ + D+W+LGCI+ +++ P F + Q I+ L P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP 257
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 121 bits (305), Expect = 6e-30
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 36/248 (14%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNKTDAQRT--Y 607
+ + +K G GA+G VYK + K VAIK++ E +
Sbjct: 13 KETEFK----KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE---ATSPKANKEIL 65
Query: 608 REILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRY 664
E + S +P++ +L I + ++ + M L +R + ++
Sbjct: 66 DEAYVMASV-DNPHVCRLLGI---CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 121
Query: 665 IMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT- 723
Q+ G++Y+ +++HRDL N+L+ +KI D GLA+ L ++ EY A
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYHAEG 178
Query: 724 -----RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNL 776
+W A E I +R YTH D+WS G + E++ SKP + G S ++
Sbjct: 179 GKVPIKWM-ALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKG 235
Query: 777 VR-PNPPH 783
R P PP
Sbjct: 236 ERLPQPPI 243
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 120 bits (304), Expect = 6e-30
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 32/253 (12%)
Query: 557 EDLQQQINLLKE----GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILF 612
E+L Q L+ +G +G V+KA N +YVA+K + + E+
Sbjct: 17 ENLYFQSMPLQLLEVKARGRFGCVWKAQLLN--EYVAVKIFPI---QDKQSWQNEYEVYS 71
Query: 613 LKSFQRHPNIITML--DIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRY-IMFQ 668
L +H NI+ + + + DL+++ + E L+ ++ ++ + I
Sbjct: 72 LPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVV-SWNELCHIAET 129
Query: 669 LCNGLSYIHAC----------KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECL- 717
+ GL+Y+H + HRD+K N+L+ + + I D GLA K
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGD 189
Query: 718 -TEYIATRWYRAPEILIS----NRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQL 772
+ TR Y APE+L R +D++++G +L E+ G + L
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249
Query: 773 IVNLVRPNPPHAD 785
+ +P D
Sbjct: 250 -EEEIGQHPSLED 261
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 120 bits (304), Expect = 2e-29
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRT--YREIL 611
+ ED + L ++ G+G +G V+ + + VA+K E + +E
Sbjct: 112 NHED----LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE---TLPPDLKAKFLQEAR 164
Query: 612 FLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK--ILKDVHIRYIMFQ 668
LK + HPNI+ ++ + + +Y+V E ++ D +R + L+ + ++
Sbjct: 165 ILKQY-SHPNIVRLIGV--CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 669 LCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT----- 723
G+ Y+ + +HRDL N L+ + +KI D G++R +D Y A+
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD-----GVYAASGGLRQ 276
Query: 724 ---RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+W APE ++ RY+ D+WS G +L E
Sbjct: 277 VPVKWT-APEA-LNYGRYSSESDVWSFGILLWETF 309
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 118 bits (298), Expect = 2e-29
Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
+R D+ + + G G YG VY+ K VA+K + E + + + +E +
Sbjct: 11 ERTDIT----MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVM 63
Query: 614 KSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIRD---KILKDVHIRYIMF 667
K +HPN++ +L V Y++ E+M +L +R+ + + V + Y+
Sbjct: 64 KEI-KHPNLVQLL----GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 668 QLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT---- 723
Q+ + + Y+ +HRDL N L+ ++ +K+ D GL+R ++ Y A
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-----TYTAHAGAK 173
Query: 724 ---RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNLVR 778
+W APE ++ +++ D+W+ G +L E+ P +PG S +L+ R
Sbjct: 174 FPIKWT-APES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELLEKDYR 230
Query: 779 -PNPPH 783
P
Sbjct: 231 MERPEG 236
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 123 bits (310), Expect = 6e-29
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 20/226 (8%)
Query: 569 GKGAYGIVYKAYDKN-NKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G G +Y A D+N N + V +K + + + E FL HP+I+ + +
Sbjct: 89 AHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVV-HPSIVQIFN 146
Query: 628 I---YKAVNNKDLYVVFEYME-NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMH 683
+ Y+V EY+ L + K+ I + ++ LSY+H+ +++
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA-YLLEILPALSYLHSIGLVY 205
Query: 684 RDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVD 743
DLKP NI++ + +K+ DLG ++ T ++APEI+ T D
Sbjct: 206 NDLKPENIMLTEE-QLKLIDLGAVSRINSF----GYLYGTPGFQAPEIV--RTGPTVATD 258
Query: 744 IWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYA 789
I+++G LA + P G + P D +
Sbjct: 259 IYTVGRTLAALTLDLPTRNGRYVDG-----LPEDDPVLKTYDSYGR 299
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 116 bits (294), Expect = 7e-29
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 555 DREDLQQQINLLKEGKGAYGIVYKAYDKNNKQY--VAIKKIFEAFRNKTDAQRTYREILF 612
DR+ L + L G G +G V K Y + K VA+K + + E
Sbjct: 14 DRKLLTLEDKEL--GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANV 71
Query: 613 LKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD-KILKDVHIRYIMFQLC 670
++ +P I+ M+ I + +V E E LNK ++ + +KD +I ++ Q+
Sbjct: 72 MQQL-DNPYIVRMIGI---CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 127
Query: 671 NGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT------- 723
G+ Y+ +HRDL N+L+ KI D GL+++L + Y A
Sbjct: 128 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---YYKAQTHGKWPV 184
Query: 724 RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+WY APE I+ +++ D+WS G ++ E
Sbjct: 185 KWY-APEC-INYYKFSSKSDVWSFGVLMWEAF 214
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 116 bits (292), Expect = 1e-28
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRNKTDAQRT--YR 608
RED+ L + G+G +G VY+ K K VA+K + + T +
Sbjct: 10 AREDVV----LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK---DCTLDNKEKFMS 62
Query: 609 EILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYI 665
E + +K+ HP+I+ ++ I + + +++ E +L + LK + +
Sbjct: 63 EAVIMKNL-DHPHIVKLIGI---IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 118
Query: 666 MFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT-- 723
Q+C ++Y+ + +HRD+ NIL+ +K+GD GL+R + D +Y
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-----DYYKASV 173
Query: 724 -----RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+W +PE I+ RR+T D+W + E+L
Sbjct: 174 TRLPIKWM-SPES-INFRRFTTASDVWMFAVCMWEIL 208
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 115 bits (290), Expect = 1e-28
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 33/214 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
RE++ LLKE G G +G+V K VA+K I E ++E +
Sbjct: 6 KREEIT----LLKELGSGQFGVVKLGKWKGQYD-VAVKMIKE---GSMSEDEFFQEAQTM 57
Query: 614 KSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYIMFQ 668
HP ++ V +Y+V EY+ N L +R K L+ + + +
Sbjct: 58 MKL-SHPKLVKFY----GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYD 112
Query: 669 LCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT----- 723
+C G++++ + + +HRDL N L+D+ +K+ D G+ R + D +Y+++
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-----DQYVSSVGTKF 167
Query: 724 --RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+W APE+ +Y+ D+W+ G ++ E+
Sbjct: 168 PVKWS-APEV-FHYFKYSSKSDVWAFGILMWEVF 199
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 116 bits (292), Expect = 2e-28
Identities = 52/265 (19%), Positives = 104/265 (39%), Gaps = 37/265 (13%)
Query: 544 DYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRN 599
+ K+ ++ ++ + Q L + GKG +G V +A + + VA+K +
Sbjct: 10 ELKEKLEDVLIPEQ----QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA 65
Query: 600 KTDAQRTYREILFLKSFQRHPNIITML----DIYKAVNNKDLYVVFEYMEN-DLNKVIR- 653
+D + RE +K F HP++ ++ V+ +M++ DL+ +
Sbjct: 66 SSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA 124
Query: 654 ------DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLA 707
L + M + G+ Y+ + +HRDL N ++ + ++ + D GL+
Sbjct: 125 SRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Query: 708 RSLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEM--LQSK 758
R + Y +W A E L ++ YT H D+W+ G + E+
Sbjct: 185 RKIYSGD----YYRQGCASKLPVKWL-ALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQT 238
Query: 759 PLFPGASTSHQLQLIVNLVRPNPPH 783
P + G + ++ R P
Sbjct: 239 P-YAGIENAEIYNYLIGGNRLKQPP 262
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 115 bits (289), Expect = 3e-28
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
D +DL LKE G G +G+V + VAIK I E E +
Sbjct: 22 DPKDLT----FLKELGTGQFGVVKYGKWRGQYD-VAIKMIKE---GSMSEDEFIEEAKVM 73
Query: 614 KSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYIMFQ 668
+ H ++ + V + ++++ EYM N L +R + + +
Sbjct: 74 MNL-SHEKLVQLY----GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 669 LCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT----- 723
+C + Y+ + + +HRDL N L++ +K+ D GL+R + D EY ++
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-----DEYTSSVGSKF 183
Query: 724 --RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
RW PE+ + +++ DIW+ G ++ E+
Sbjct: 184 PVRWS-PPEV-LMYSKFSSKSDIWAFGVLMWEIY 215
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 115 bits (289), Expect = 3e-28
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRNKTDAQRTY-RE 609
+DL+ LL++ G G++G+V + VA+K + ++ +A + RE
Sbjct: 16 GEKDLR----LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 71
Query: 610 ILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYIM 666
+ + S H N+I + + V + +V E L +R +
Sbjct: 72 VNAMHSL-DHRNLIRLYGV---VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 667 FQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT--- 723
Q+ G+ Y+ + + +HRDL N+L+ +KIGD GL R+L + + Y+
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD---HYVMQEHR 184
Query: 724 ----RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
W APE + R ++H D W G L EM
Sbjct: 185 KVPFAWC-APES-LKTRTFSHASDTWMFGVTLWEMF 218
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 114 bits (288), Expect = 4e-28
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRNKTDAQRT--YR 608
RE ++ L + G+G +G V++ +N VAIK +D+ R +
Sbjct: 13 QRERIE----LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQ 65
Query: 609 EILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYI 665
E L ++ F HP+I+ ++ + + ++++ E +L ++ L +
Sbjct: 66 EALTMRQF-DHPHIVKLIGV---ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY 121
Query: 666 MFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT-- 723
+QL L+Y+ + + +HRD+ N+L+ + +K+GD GL+R + DS Y
Sbjct: 122 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASK 176
Query: 724 -----RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNL 776
+W APE I+ RR+T D+W G + E+L KP F G + + I N
Sbjct: 177 GKLPIKWM-APES-INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENG 233
Query: 777 VR-PNPPHA-DKFYAG-----FKSKHEREKFNQVVVKCQKELQELQSQ 817
R P PP+ Y+ R +F ++ + L+E ++Q
Sbjct: 234 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 281
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 115 bits (289), Expect = 4e-28
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 40/263 (15%)
Query: 544 DYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRN 599
+ +++ ++ L ++ + G+G +G VY + K + A+K +
Sbjct: 10 ELVQAVQHVVIGPSSLI--VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---I 64
Query: 600 KTDAQRT--YREILFLKSFQRHPNIITMLDIYKAVNNKD--LYVVFEYMEN-DLNKVIR- 653
+ + E + +K F HPN++++L I + VV YM++ DL IR
Sbjct: 65 TDIGEVSQFLTEGIIMKDF-SHPNVLSLLGI---CLRSEGSPLVVLPYMKHGDLRNFIRN 120
Query: 654 -DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSD 712
+ Q+ G+ Y+ + K +HRDL N ++D+ ++K+ D GLAR + D
Sbjct: 121 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
Query: 713 SKECLTEYIAT----------RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPL 760
EY + +W A E + +++T D+WS G +L E++ + P
Sbjct: 181 -----KEYYSVHNKTGAKLPVKWM-ALES-LQTQKFTTKSDVWSFGVLLWELMTRGAPP- 232
Query: 761 FPGASTSHQLQLIVNLVRPNPPH 783
+P +T ++ R P
Sbjct: 233 YPDVNTFDITVYLLQGRRLLQPE 255
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 115 bits (290), Expect = 5e-28
Identities = 73/300 (24%), Positives = 126/300 (42%), Gaps = 38/300 (12%)
Query: 562 QINLLKE-GKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILFLK 614
+ +K G GA+G VYK + K VAIK++ E + E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE---ATSPKANKEILDEAYVMA 72
Query: 615 SFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYIMFQLCN 671
S +P++ +L I + ++ + M L +R + ++ Q+
Sbjct: 73 SV-DNPHVCRLLGI---CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 672 GLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT------RW 725
G++Y+ +++HRDL N+L+ +KI D GLA+ L ++ EY A +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYHAEGGKVPIKW 185
Query: 726 YRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNLVR-PNPP 782
A E I +R YTH D+WS G + E++ SKP + G S ++ R P PP
Sbjct: 186 M-ALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKP-YDGIPASEISSILEKGERLPQPP 242
Query: 783 HA-DKFYAG-----FKSKHEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKD 836
Y R KF +++++ K ++ Q +V + ++ L DS
Sbjct: 243 ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 302
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 115 bits (289), Expect = 7e-28
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRNKTDAQRT--YR 608
+ + + K G G G V VAIK + T+ QR
Sbjct: 47 EASRIH----IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKA---GYTERQRRDFLS 99
Query: 609 EILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIR 663
E + F HPNII + V + +V EYMEN L+ +R D + +
Sbjct: 100 EASIMGQF-DHPNIIRLE----GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 664 YIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT 723
++ + G+ Y+ +HRDL N+L+D + K+ D GL+R L D + T
Sbjct: 155 GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD---AAYTT 211
Query: 724 -------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
RW APE I+ R ++ D+WS G ++ E+L
Sbjct: 212 TGGKIPIRWT-APEA-IAFRTFSSASDVWSFGVVMWEVL 248
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 115 bits (289), Expect = 8e-28
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNKTDAQRT--Y 607
+ K G G +G VYK + VAIK + T+ QR
Sbjct: 42 HPSCVT----RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA---GYTEKQRVDFL 94
Query: 608 REILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--DKILKDVHI 662
E + F H NII + V K + ++ EYMEN L+K +R D + +
Sbjct: 95 GEAGIMGQF-SHHNIIRLE----GVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL 149
Query: 663 RYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIA 722
++ + G+ Y+ +HRDL NIL++ + K+ D GL+R L D E Y
Sbjct: 150 VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE--ATYTT 207
Query: 723 T------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+ RW APE IS R++T D+WS G ++ E++
Sbjct: 208 SGGKIPIRWT-APEA-ISYRKFTSASDVWSFGIVMWEVM 244
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 113 bits (284), Expect = 8e-28
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
D +L ++E G G +G+V+ Y NK VAIK I E + E +
Sbjct: 6 DPSELT----FVQEIGSGQFGLVHLGY-WLNKDKVAIKTIRE---GAMSEEDFIEEAEVM 57
Query: 614 KSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYIMFQ 668
HP ++ + V + +V E+ME+ L+ +R + + +
Sbjct: 58 MKL-SHPKLVQLY----GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 112
Query: 669 LCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT----- 723
+C G++Y+ V+HRDL N L+ ++ IK+ D G+ R + D +Y ++
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----QYTSSTGTKF 167
Query: 724 --RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+W +PE+ S RY+ D+WS G ++ E+
Sbjct: 168 PVKWA-SPEV-FSFSRYSSKSDVWSFGVLMWEVF 199
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 116 bits (292), Expect = 8e-28
Identities = 72/303 (23%), Positives = 117/303 (38%), Gaps = 76/303 (25%)
Query: 565 LLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREIL--FLKSFQRHPN- 621
+ K G G + V+ ++D K++VA+ K+ ++ + T+ +L S PN
Sbjct: 42 IRKLGWGHFSTVWLSWDIQGKKFVAM-KVVKSAEHYTETALDEIRLLKSVRNSDPNDPNR 100
Query: 622 --IITMLDI--YKAVNNKDLYVVFEYMENDLNKVIR---DKILKDVHIRYIMFQLCNGLS 674
++ +LD VN + +VFE + + L K I + L ++ I+ Q+ GL
Sbjct: 101 EMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLD 160
Query: 675 YIHA-CKVMHRDLKPSNILI---------------------------------------- 693
Y+H C+++H D+KP NIL+
Sbjct: 161 YLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNF 220
Query: 694 ---------DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDI 744
+ +KI DLG A + + TE I TR YR+ E+LI Y DI
Sbjct: 221 LVNPLEPKNAEKLKVKIADLGNACWVH---KHFTEDIQTRQYRSLEVLI-GSGYNTPADI 276
Query: 745 WSLGCILAEMLQSKPLFPGASTS------HQLQLIVNLVRPNPPHADKFYAGFKSKHERE 798
WS C+ E+ LF S + LI+ L+ P K+ +E
Sbjct: 277 WSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK---LIV--AGKYSKE 331
Query: 799 KFN 801
F
Sbjct: 332 FFT 334
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 119 bits (301), Expect = 1e-27
Identities = 71/324 (21%), Positives = 133/324 (41%), Gaps = 28/324 (8%)
Query: 453 QAHELKEELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTM 512
E EE+ + LE EEER + + + A + ++ + ++
Sbjct: 81 PLVEFYEEIKKY--EKLETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVK 138
Query: 513 KEL------ELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLL 566
K++ + + ++ ++ + S+ R +K + D ++
Sbjct: 139 KQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSV-HRII 197
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAF---RNKTDAQRTYREILFLKSFQRHPNII 623
G+G +G VY + + A+K + + + R +L L S P I+
Sbjct: 198 --GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 624 TMLDIYKAVNNKDLYVVFEYMEN-DLNKVI-RDKILKDVHIRYIMFQLCNGLSYIHACKV 681
M Y L + + M DL+ + + + + +R+ ++ GL ++H V
Sbjct: 256 CM--SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 682 MHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKE---CLT-EYIATRWYRAPEILISNRR 737
++RDLKP+NIL+D+ ++I DLGLA S K T Y+ APE+L
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM------APEVLQKGVA 367
Query: 738 YTHHVDIWSLGCILAEMLQSKPLF 761
Y D +SLGC+L ++L+ F
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPF 391
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 113 bits (285), Expect = 2e-27
Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 42/226 (18%)
Query: 562 QINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIF----EAFRNKTDAQRTYREILFLKSF 616
+ LL+ G+G YG VYK +++ VA+K + F N+ + R
Sbjct: 14 NLKLLELIGRGRYGAVYKG--SLDERPVAVKVFSFANRQNFINEKNIYRVPL-------- 63
Query: 617 QRHPNIITML--DIYKAVNNKD-LYVVFEYMEN-DLNKVIRDKILKDVHIRYIMFQLCNG 672
H NI + D + + +V EY N L K + V + + G
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRG 123
Query: 673 LSYIHA---------CKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIA- 722
L+Y+H + HRDL N+L+ + I D GL+ L+ ++
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 723 -------TRWYRAPEIL------ISNRRYTHHVDIWSLGCILAEML 755
T Y APE+L VD+++LG I E+
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 113 bits (284), Expect = 3e-27
Identities = 63/255 (24%), Positives = 93/255 (36%), Gaps = 57/255 (22%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT-- 606
R L K G GA+G V +A + VA+K + + +R
Sbjct: 21 PRNRLS----FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP---SAHLTEREAL 73
Query: 607 YREILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIRDK-------- 655
E+ L H NI+ +L V+ EY DL +R K
Sbjct: 74 MSELKVLSYLGNHMNIVNLL----GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 129
Query: 656 -----------ILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDL 704
L + +Q+ G++++ + +HRDL NIL+ KI D
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 189
Query: 705 GLARSLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEM--L 755
GLAR + + Y+ +W APE I N YT D+WS G L E+ L
Sbjct: 190 GLARDIKNDS----NYVVKGNARLPVKWM-APE-SIFNCVYTFESDVWSYGIFLWELFSL 243
Query: 756 QSKPLFPGASTSHQL 770
S P +PG +
Sbjct: 244 GSSP-YPGMPVDSKF 257
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 116 bits (291), Expect = 3e-27
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 31/284 (10%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
RE L+ L + G+G +G V+ + VAIK + + +E +
Sbjct: 182 PRESLR----LEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKP---GTMSPEAFLQEAQVM 233
Query: 614 KSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD---KILKDVHIRYIMFQL 669
K RH ++ + Y V+ + +Y+V EYM L ++ K L+ + + Q+
Sbjct: 234 KKL-RHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 289
Query: 670 CNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEY--IATRWYR 727
+G++Y+ +HRDL+ +NIL+ ++ K+ D GLAR + D++ + +W
Sbjct: 290 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT- 348
Query: 728 APEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNLVR-PNPPHA 784
APE R+T D+WS G +L E+ P +PG L + R P PP
Sbjct: 349 APEA-ALYGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVERGYRMPCPPEC 406
Query: 785 -DKFYAGFKS--KHEREK---FNQVVVKCQKELQELQSQVVEEN 822
+ + + E E+ F + + + Q
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 450
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 116 bits (293), Expect = 3e-27
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 31/284 (10%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
RE L+ L + G+G +G V+ + VAIK + + +E +
Sbjct: 265 PRESLR----LEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKP---GTMSPEAFLQEAQVM 316
Query: 614 KSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD---KILKDVHIRYIMFQL 669
K RH ++ + Y V+ + +Y+V EYM L ++ K L+ + + Q+
Sbjct: 317 KKL-RHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI 372
Query: 670 CNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEY--IATRWYR 727
+G++Y+ +HRDL+ +NIL+ ++ K+ D GLAR + D++ + +W
Sbjct: 373 ASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT- 431
Query: 728 APEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNLVR-PNPPHA 784
APE R+T D+WS G +L E+ P +PG L + R P PP
Sbjct: 432 APEA-ALYGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVERGYRMPCPPEC 489
Query: 785 -DKFYAGFKS--KHEREK---FNQVVVKCQKELQELQSQVVEEN 822
+ + + E E+ F + + + Q
Sbjct: 490 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE 533
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 111 bits (281), Expect = 3e-27
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 550 DQLMKDREDLQQQINLLKEGKGAYGIVYKAY--DKNNKQYVAIKKIFEAFRNKTDAQRT- 606
+L R++L I ++ G G +G V + + + VAIK + + A
Sbjct: 2 KKLFLKRDNLL--IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ---GTEKADTEE 56
Query: 607 -YREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR--DKILKDVHI 662
RE + +P I+ ++ + + L +V E L+K + + + ++
Sbjct: 57 MMREAQIMHQL-DNPYIVRLIGV---CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV 112
Query: 663 RYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIA 722
++ Q+ G+ Y+ +HRDL N+L+ KI D GL+++L Y A
Sbjct: 113 AELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTA 169
Query: 723 T-------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+WY APE I+ R+++ D+WS G + E L
Sbjct: 170 RSAGKWPLKWY-APEC-INFRKFSSRSDVWSYGVTMWEAL 207
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 116 bits (291), Expect = 4e-27
Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 34/250 (13%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
+R D+ + + G G YG VY+ K VA+K + E + + + +E +
Sbjct: 218 ERTDIT----MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVM 270
Query: 614 KSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD---KILKDVHIRYIMFQL 669
K +HPN++ +L + Y++ E+M +L +R+ + + V + Y+ Q+
Sbjct: 271 KEI-KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 327
Query: 670 CNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT------ 723
+ + Y+ +HR+L N L+ ++ +K+ D GL+R ++ Y A
Sbjct: 328 SSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-----TYTAHAGAKFP 382
Query: 724 -RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNLVR-P 779
+W APE ++ +++ D+W+ G +L E+ P +PG S +L+ R
Sbjct: 383 IKWT-APES-LAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELLEKDYRME 439
Query: 780 NPPHA-DKFY 788
P +K Y
Sbjct: 440 RPEGCPEKVY 449
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 113 bits (285), Expect = 5e-27
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRNKTDAQRT--YR 608
D ++ + K G G +G V + VAIK + T+ QR
Sbjct: 43 DATNIS----IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV---GYTEKQRRDFLG 95
Query: 609 EILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIR 663
E + F HPNII + V +K + +V EYMEN L+ +R D + +
Sbjct: 96 EASIMGQF-DHPNIIRLE----GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 664 YIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT 723
++ + +G+ Y+ +HRDL NILI+ + K+ D GL R L D E Y
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE--AAYTTR 208
Query: 724 ------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
RW +PE I+ R++T D+WS G +L E++
Sbjct: 209 GGKIPIRWT-SPEA-IAYRKFTSASDVWSYGIVLWEVM 244
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 111 bits (280), Expect = 7e-27
Identities = 47/234 (20%), Positives = 95/234 (40%), Gaps = 33/234 (14%)
Query: 544 DYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRN 599
+ + ++ ++ DR + L K G+G +G V + + VA+K + +
Sbjct: 21 ELQNKLEDVVIDRN----LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS 76
Query: 600 KTDAQRTYREILFLKSFQRHPNIITMLDI---YKAVNNKDLYVVFEYMEN-DLNKVIR-- 653
+ + + E +K F HPN+I +L + + V+ +M+ DL+ +
Sbjct: 77 QREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS 135
Query: 654 -----DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLAR 708
K + + M + G+ Y+ +HRDL N ++ ++ + D GL++
Sbjct: 136 RLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
Query: 709 SLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+ Y +W A E L ++R YT D+W+ G + E+
Sbjct: 196 KIYSG----DYYRQGRIAKMPVKWI-AIESL-ADRVYTSKSDVWAFGVTMWEIA 243
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 110 bits (277), Expect = 9e-27
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
RE L+ L++ G G +G V+ Y + + VA+K + + E +
Sbjct: 11 PRETLK----LVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQ---GSMSPDAFLAEANLM 62
Query: 614 KSFQRHPNIITMLDIYKAVNNKD-LYVVFEYMEN-DLNKVIRD---KILKDVHIRYIMFQ 668
K +H ++ + AV ++ +Y++ EYMEN L ++ L + + Q
Sbjct: 63 KQL-QHQRLVRLY----AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 669 LCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT----- 723
+ G+++I +HRDL+ +NIL+ + S KI D GLAR + D EY A
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-----NEYTAREGAKF 172
Query: 724 --RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+W APE I+ +T D+WS G +L E++
Sbjct: 173 PIKWT-APEA-INYGTFTIKSDVWSFGILLTEIV 204
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 115 bits (289), Expect = 1e-26
Identities = 69/366 (18%), Positives = 135/366 (36%), Gaps = 35/366 (9%)
Query: 410 EAKRNIEEEYHKLKTKRSVEDLQMKE-LQDQLETEQYFSTLYKTQAHELKEELDERSRNI 468
+ +++ + + ++ + ++ L+ + + ++ ++
Sbjct: 49 ALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADD-------- 100
Query: 469 LELEEERGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKEL-ELKDLMAKHRSD 527
R L+ A ++ + ETV L + H
Sbjct: 101 ----ALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQ 156
Query: 528 LSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQ 586
+E L S R + +K Q M + + G+G +G V+ K +
Sbjct: 157 APFQEFLDSLYFLRFLQWKWLEAQPMG-EDWF----LDFRVLGRGGFGEVFACQMKATGK 211
Query: 587 YVAIKKIFEAF---RNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEY 643
A KK+ + R ++IL + I+++ Y DL +V
Sbjct: 212 LYACKKLNKKRLKKRKGYQGAMVEKKIL---AKVHSRFIVSL--AYAFETKTDLCLVMTI 266
Query: 644 MEN-DL-----NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSC 697
M D+ N + ++ + Q+ +GL ++H +++RDLKP N+L+D
Sbjct: 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG 326
Query: 698 SIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQS 757
+++I DLGLA L + Y T + APE+L Y VD ++LG L EM+ +
Sbjct: 327 NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL-LGEEYDFSVDYFALGVTLYEMIAA 385
Query: 758 KPLFPG 763
+ F
Sbjct: 386 RGPFRA 391
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 113 bits (284), Expect = 1e-26
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 42/291 (14%)
Query: 516 ELKDLMAKHRSDLS------SKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE- 568
++ +L+ +S+++ ++L+ + + K+ID + +D +I L+
Sbjct: 8 KMDNLLRDPKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMK 67
Query: 569 ----------GKGAYGIVYKAYDKNNKQYVAIKKIFEAF---RNKTDAQRTYREILFLKS 615
G+GA+G V K+ ++ A+K + + R+ + R+I+ +
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM---A 124
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYME-NDLNKVIRDKILKDVHIRYIMFQLCNGLS 674
F P ++ + Y +++ LY+V EYM DL ++ + + + R+ ++ L
Sbjct: 125 FANSPWVVQLF--YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD 182
Query: 675 YIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLT-------EYIATRWYR 727
IH+ +HRD+KP N+L+DKS +K+ D G ++ +YI
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI------ 236
Query: 728 APEILIS---NRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
+PE+L S + Y D WS+G L EML F S I+N
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 110 bits (277), Expect = 1e-26
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 52/231 (22%)
Query: 561 QQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILF 612
+ I L +E G+GA+G V+ A +K VA+K + + T A R RE
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAEL 70
Query: 613 LKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR---------------- 653
L + Q H +I+ V + L +VFEYM++ DLNK +R
Sbjct: 71 LTNLQ-HEHIVKFY----GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125
Query: 654 -DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSD 712
L + +I Q+ +G+ Y+ + +HRDL N L+ + +KIGD G++R +
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS 185
Query: 713 SKECLTEYIAT--------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
T+Y RW PE I R++T D+WS G IL E+
Sbjct: 186 -----TDYYRVGGHTMLPIRWM-PPES-IMYRKFTTESDVWSFGVILWEIF 229
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 109 bits (275), Expect = 2e-26
Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 45/247 (18%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
+ ++L+ LL+ GKG +G V + NK VA+K I +N AQ E +
Sbjct: 19 NMKELK----LLQTIGKGEFGDVMLGDYRGNK--VAVKCI----KNDATAQAFLAEASVM 68
Query: 614 KSFQRHPNIITMLDIYKAV---NNKDLYVVFEYMEN-DLNKVIRD---KILKDVHIRYIM 666
RH N++ +L V LY+V EYM L +R +L +
Sbjct: 69 TQL-RHSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123
Query: 667 FQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT--- 723
+C + Y+ +HRDL N+L+ + K+ D GL +
Sbjct: 124 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE---------ASSTQDTG 174
Query: 724 ----RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNLV 777
+W APE + ++++ D+WS G +L E+ P +P + +
Sbjct: 175 KLPVKWT-APEA-LREKKFSTKSDVWSFGILLWEIYSFGRVP-YPRIPLKDVVPRVEKGY 231
Query: 778 R-PNPPH 783
+ P
Sbjct: 232 KMDAPDG 238
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 111 bits (278), Expect = 3e-26
Identities = 56/264 (21%), Positives = 113/264 (42%), Gaps = 42/264 (15%)
Query: 544 DYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRN 599
+ +++ ++ L ++ + G+G +G VY + K + A+K +
Sbjct: 74 ELVQAVQHVVIGPSSLI--VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---I 128
Query: 600 KTDAQRT--YREILFLKSFQRHPNIITMLDIYKAV---NNKDLYVVFEYMEN-DLNKVIR 653
+ + E + +K F HPN++++L + + VV YM++ DL IR
Sbjct: 129 TDIGEVSQFLTEGIIMKDF-SHPNVLSLL----GICLRSEGSPLVVLPYMKHGDLRNFIR 183
Query: 654 --DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLS 711
+ Q+ G+ ++ + K +HRDL N ++D+ ++K+ D GLAR +
Sbjct: 184 NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243
Query: 712 DSKECLTEYIAT----------RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKP 759
D E+ + +W A E + +++T D+WS G +L E++ + P
Sbjct: 244 D-----KEFDSVHNKTGAKLPVKWM-ALES-LQTQKFTTKSDVWSFGVLLWELMTRGAPP 296
Query: 760 LFPGASTSHQLQLIVNLVRPNPPH 783
+P +T ++ R P
Sbjct: 297 -YPDVNTFDITVYLLQGRRLLQPE 319
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 112 bits (282), Expect = 3e-26
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFL 613
RE L+ L K+ G G +G V+ A + + VA+K + + E +
Sbjct: 186 PRESLK----LEKKLGAGQFGEVWMATYNKHTK-VAVKTMKP---GSMSVEAFLAEANVM 237
Query: 614 KSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRD---KILKDVHIRYIMFQL 669
K+ +H ++ + + V + +Y++ E+M L ++ + Q+
Sbjct: 238 KTL-QHDKLVKL---HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI 293
Query: 670 CNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT------ 723
G+++I +HRDL+ +NIL+ S KI D GLAR + D+ EY A
Sbjct: 294 AEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN-----EYTAREGAKFP 348
Query: 724 -RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+W APE I+ +T D+WS G +L E++
Sbjct: 349 IKWT-APEA-INFGSFTIKSDVWSFGILLMEIV 379
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 110 bits (277), Expect = 4e-26
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 21/261 (8%)
Query: 522 AKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYD 581
AK S+ S + L+ KE + ++ Q + + L G G++G V
Sbjct: 6 AKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTL---GTGSFGRVMLVKH 62
Query: 582 KNNKQYVAIK--KIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYV 639
K + + A+K + + K + T E L++ P ++ + +K +N +LY+
Sbjct: 63 KESGNHYAMKILDKQKVVKLK-QIEHTLNEKRILQAV-NFPFLVKLEFSFK--DNSNLYM 118
Query: 640 VFEYME-NDLNKVIRD-KILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSC 697
V EY+ ++ +R + H R+ Q+ Y+H+ +++RDLKP N+LID+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
Query: 698 SIKIGDLGLARSLSDSKE--CLT-EYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEM 754
I++ D G A+ + C T E + APEI I ++ Y VD W+LG ++ EM
Sbjct: 179 YIQVTDFGFAKRVKGRTWTLCGTPEAL------APEI-ILSKGYNKAVDWWALGVLIYEM 231
Query: 755 LQSKPLFPGASTSHQLQLIVN 775
P F + IV+
Sbjct: 232 AAGYPPFFADQPIQIYEKIVS 252
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 112 bits (281), Expect = 5e-26
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 36/248 (14%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRT--YREIL 611
+ ++L+ LL+ GKG +G V + NK VA+K I K DA E
Sbjct: 191 NMKELK----LLQTIGKGEFGDVMLGDYRGNK--VAVKCI------KNDATAQAFLAEAS 238
Query: 612 FLKSFQRHPNIITMLDIYKAV---NNKDLYVVFEYMEN-DLNKVIRD---KILKDVHIRY 664
+ RH N++ +L V LY+V EYM L +R +L +
Sbjct: 239 VMTQL-RHSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293
Query: 665 IMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATR 724
+C + Y+ +HRDL N+L+ + K+ D GL + S +++ T + +
Sbjct: 294 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVK 351
Query: 725 WYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNLVR-PNP 781
W APE + ++++ D+WS G +L E+ P +P + + + P
Sbjct: 352 WT-APEA-LREKKFSTKSDVWSFGILLWEIYSFGRVP-YPRIPLKDVVPRVEKGYKMDAP 408
Query: 782 PHA-DKFY 788
Y
Sbjct: 409 DGCPPAVY 416
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 108 bits (273), Expect = 7e-26
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 56/254 (22%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT-- 606
R+ L+ L K G+GA+G V +A + VA+K + E T ++
Sbjct: 25 PRDRLK----LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRAL 77
Query: 607 YREILFLKSFQRHPNIITMLDIYKAV---NNKDLYVVFEYMEN-DLNKVIRD-------- 654
E+ L H N++ +L L V+ E+ + +L+ +R
Sbjct: 78 MSELKILIHIGHHLNVVNLL----GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 655 ---------KILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLG 705
L H+ FQ+ G+ ++ + K +HRDL NIL+ + +KI D G
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 706 LARSLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEM--LQ 756
LAR + +Y+ +W APE + +R YT D+WS G +L E+ L
Sbjct: 194 LARDIYKDP----DYVRKGDARLPLKWM-APETIF-DRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 757 SKPLFPGASTSHQL 770
+ P +PG +
Sbjct: 248 ASP-YPGVKIDEEF 260
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 108 bits (273), Expect = 1e-25
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 62/308 (20%)
Query: 522 AKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAY 580
+ H S++ +L+ E E+ + R+ L L K G+GA+G V A
Sbjct: 3 SSHHHHHHSQDPMLAGVSEYELPED---PKWEFPRDKLT----LGKPLGEGAFGQVVMAE 55
Query: 581 -------DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILFLKSFQRHPNIITMLDIYKA 631
VA+K + + + T+ + E+ +K +H NII +L
Sbjct: 56 AVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEMEMMKMIGKHKNIINLL----G 108
Query: 632 V--NNKDLYVVFEYMEN-DLNKVIR-----------------DKILKDVHIRYIMFQLCN 671
+ LYV+ EY +L + +R ++ + + +QL
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 168
Query: 672 GLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT-------R 724
G+ Y+ + K +HRDL N+L+ ++ +KI D GLAR +++ Y T +
Sbjct: 169 GMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID----YYKKTTNGRLPVK 224
Query: 725 WYRAPEILISNRRYTHHVDIWSLGCILAEM--LQSKPLFPGASTSHQLQLIVNLVR-PNP 781
W APE L +R YTH D+WS G ++ E+ L P +PG +L+ R P
Sbjct: 225 WM-APEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKP 281
Query: 782 PHA-DKFY 788
+ ++ Y
Sbjct: 282 ANCTNELY 289
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 108 bits (272), Expect = 1e-25
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 38/249 (15%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNKTDAQRT--Y 607
+L+ LK G G +G V+K ++ K V IK I +
Sbjct: 11 KETELR----KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIED---KSGRQSFQAVT 63
Query: 608 REILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK--ILKDVHIRY 664
+L + S H +I+ +L + L +V +Y+ L +R L +
Sbjct: 64 DHMLAIGSL-DHAHIVRLLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 119
Query: 665 IMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT- 723
Q+ G+ Y+ ++HR+L N+L+ +++ D G+A L + +
Sbjct: 120 WGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD----DKQLLYS 175
Query: 724 ------RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVN 775
+W A E I +YTH D+WS G + E++ ++P + G + L+
Sbjct: 176 EAKTPIKWM-ALES-IHFGKYTHQSDVWSYGVTVWELMTFGAEP-YAGLRLAEVPDLLEK 232
Query: 776 LVR-PNPPH 783
R P
Sbjct: 233 GERLAQPQI 241
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 107 bits (269), Expect = 1e-25
Identities = 42/254 (16%), Positives = 95/254 (37%), Gaps = 42/254 (16%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKA-------YDKNNKQYVAIKKIFEAFRNKTDAQRT 606
EDL + G+G + ++K Y + ++ V +K + +A RN +++
Sbjct: 6 RNEDLI----FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES--F 59
Query: 607 YREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDK--ILKDVHIR 663
+ + H +++ + V + +V E+++ L+ ++ + +
Sbjct: 60 FEAASMMSKL-SHKHLVLNYGV--CVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 664 YIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCS--------IKIGDLGLARSLSDSKE 715
+ QL + ++ ++H ++ NIL+ + IK+ D G++ ++
Sbjct: 117 EVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-- 174
Query: 716 CLTEY--IATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQ 771
+ W PE + + + D WS G L E+ KP + +LQ
Sbjct: 175 ---DILQERIPWV-PPECIENPKNLNLATDKWSFGTTLWEICSGGDKP-LSALDSQRKLQ 229
Query: 772 LIVN---LVRPNPP 782
+ L P
Sbjct: 230 FYEDRHQLPAPKAA 243
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 106 bits (268), Expect = 2e-25
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 35/220 (15%)
Query: 555 DREDLQQQINLLKEGKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRNKTDAQRTYREIL 611
+R + GKG +G+VY N+ AIK + + RE L
Sbjct: 19 ERVVTHSDRVI---GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGL 74
Query: 612 FLKSFQRHPNIITMLDIYKAV---NNKDLYVVFEYMEN-DLNKVIRD--KILKDVHIRYI 665
++ HPN++ ++ + +V+ YM + DL + IR + +
Sbjct: 75 LMRGL-NHPNVLALI----GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF 129
Query: 666 MFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT-- 723
Q+ G+ Y+ K +HRDL N ++D+S ++K+ D GLAR + D EY +
Sbjct: 130 GLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD-----REYYSVQQ 184
Query: 724 --------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+W A E L R+T D+WS G +L E+L
Sbjct: 185 HRHARLPVKWT-ALESL-QTYRFTTKSDVWSFGVLLWELL 222
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 111 bits (280), Expect = 2e-25
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 555 DREDLQQQINLLKEGKGAYGIVYKAY--DKNNKQYVAIKKIFEAFRNKTDAQRTYREILF 612
R++L L G G +G V + + + VAIK + + D + RE
Sbjct: 333 KRDNLLIADIEL--GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA-DTEEMMREAQI 389
Query: 613 LKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYIMFQL 669
+ +P I+ ++ + + L +V E L+K + + + ++ ++ Q+
Sbjct: 390 MHQL-DNPYIVRLIGV---CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV 445
Query: 670 CNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT------ 723
G+ Y+ +HR+L N+L+ KI D GL+++L Y A
Sbjct: 446 SMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTARSAGKWP 502
Query: 724 -RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+WY APE I+ R+++ D+WS G + E L
Sbjct: 503 LKWY-APEC-INFRKFSSRSDVWSYGVTMWEAL 533
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 107 bits (269), Expect = 3e-25
Identities = 65/284 (22%), Positives = 105/284 (36%), Gaps = 71/284 (25%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT-- 606
RE+L+ K G GA+G V A VA+K + E ++R
Sbjct: 43 PRENLE----FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE---KADSSEREAL 95
Query: 607 YREILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIRDK-------- 655
E+ + H NI+ +L + +Y++FEY DL +R K
Sbjct: 96 MSELKMMTQLGSHENIVNLL----GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDE 151
Query: 656 ----------------ILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSI 699
+L + +Q+ G+ ++ +HRDL N+L+ +
Sbjct: 152 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVV 211
Query: 700 KIGDLGLARSLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILA 752
KI D GLAR + Y+ +W APE + YT D+WS G +L
Sbjct: 212 KICDFGLARDIMSDS----NYVVRGNARLPVKWM-APE-SLFEGIYTIKSDVWSYGILLW 265
Query: 753 EM--LQSKPLFPGASTSHQLQLIVNLVR-----PNPPHA-DKFY 788
E+ L P +PG L++ P +A ++ Y
Sbjct: 266 EIFSLGVNP-YPGIPVDANF---YKLIQNGFKMDQPFYATEEIY 305
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 111 bits (279), Expect = 3e-25
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 27/242 (11%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY---DKNNKQYVAIKKIFEAFRNKTDAQRT--YR 608
RE ++ L + G+G +G V++ +N VAIK +D+ R +
Sbjct: 388 QRERIE----LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQ 440
Query: 609 EILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIR--DKILKDVHIRYI 665
E L ++ F HP+I+ ++ + + ++++ E +L ++ L +
Sbjct: 441 EALTMRQF-DHPHIVKLIGV---ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILY 496
Query: 666 MFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEY--IAT 723
+QL L+Y+ + + +HRD+ N+L+ + +K+GD GL+R + DS +
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 724 RWYRAPEILISNRRYTHHVDIWSLGCILAEMLQ--SKPLFPGASTSHQLQLIVNLVRPNP 781
+W APE I+ RR+T D+W G + E+L KP F G + + I N R
Sbjct: 557 KWM-APES-INFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPM 613
Query: 782 PH 783
P
Sbjct: 614 PP 615
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 106 bits (266), Expect = 6e-25
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 51/229 (22%)
Query: 562 QINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILFL 613
I L E G+GA+G V+ A + +K VA+K + EA +++ R RE L
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELL 97
Query: 614 KSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR----------------D 654
+H +I+ V + L +VFEYM + DLN+ +R
Sbjct: 98 TML-QHQHIVRFF----GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 655 KILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSK 714
L + + Q+ G+ Y+ +HRDL N L+ + +KIGD G++R +
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS-- 210
Query: 715 ECLTEY--------IATRWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
T+Y + RW PE I R++T D+WS G +L E+
Sbjct: 211 ---TDYYRVGGRTMLPIRWM-PPES-ILYRKFTTESDVWSFGVVLWEIF 254
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 110 bits (276), Expect = 6e-25
Identities = 75/336 (22%), Positives = 131/336 (38%), Gaps = 25/336 (7%)
Query: 461 LDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEETVGELE---KEKTMKEL-- 515
LD + + +++R L L + + V ++ K+L
Sbjct: 84 LDGVAEYEVTPDDKRKACGRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQ 143
Query: 516 ELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYG 574
EL L ++ S + L S R + +K Q + + + GKG +G
Sbjct: 144 ELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVT-----KNTFRQYRVLGKGGFG 198
Query: 575 IVYKAYDKNNKQYVAIKKIFEAF---RNKTDAQRTYREILFLKSFQRHPNIITMLDIYKA 631
V + + A KK+ + R ++IL ++++ Y
Sbjct: 199 EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL---EKVNSRFVVSL--AYAY 253
Query: 632 VNNKDLYVVFEYMEN-DLN---KVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLK 687
L +V M DL + + + ++C GL +H ++++RDLK
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLK 313
Query: 688 PSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSL 747
P NIL+D I+I DLGLA + + + + T Y APE++ N RYT D W+L
Sbjct: 314 PENILLDDHGHIRISDLGLAVHVPEGQTIKG-RVGTVGYMAPEVV-KNERYTFSPDWWAL 371
Query: 748 GCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPH 783
GC+L EM+ + F + + + LV+ P
Sbjct: 372 GCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE 407
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 105 bits (263), Expect = 7e-25
Identities = 33/224 (14%), Positives = 53/224 (23%), Gaps = 34/224 (15%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKI-FEAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G ++A D + VA+ + + Q T L L P + +LD
Sbjct: 40 GGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLD 98
Query: 628 IYKAVNNKDLYVVFEYME-NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDL 686
+ VV E++ L +V V M L H V
Sbjct: 99 V--VHTRAGGLVVAEWIRGGSLQEVADTS-PSPVGAIRAMQSLAAAADAAHRAGVALSID 155
Query: 687 KPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWS 746
PS + + + + DI
Sbjct: 156 HPSRVRVSIDGDVVLAYPA--------------------TMPDA--------NPQDDIRG 187
Query: 747 LGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYAG 790
+G L +L ++ P A L P
Sbjct: 188 IGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRD 231
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 104 bits (263), Expect = 7e-25
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 49/230 (21%)
Query: 561 QQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILF 612
+ ++E G+ +G VYK + Q VAIK + + R E +
Sbjct: 9 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD---KAEGPLREEFRHEAML 65
Query: 613 LKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR---------------- 653
+HPN++ +L V ++ L ++F Y + DL++ +
Sbjct: 66 RARL-QHPNVVCLL----GVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 654 -DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSD 712
L+ +++ Q+ G+ Y+ + V+H+DL N+L+ ++KI DLGL R +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 713 SKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
+ Y RW APE I +++ DIWS G +L E+
Sbjct: 181 A----DYYKLLGNSLLPIRWM-APEA-IMYGKFSIDSDIWSYGVVLWEVF 224
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 107 bits (268), Expect = 8e-25
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 54/237 (22%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY-------DKNNKQYVAIKKIFEAFRNKTDAQRT 606
R+ L L K G+GA+G V A N VA+K + + T+ +
Sbjct: 67 PRDRLV----LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS---DATEKDLS 119
Query: 607 --YREILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR-------- 653
E+ +K +H NII +L + LYV+ EY +L + ++
Sbjct: 120 DLISEMEMMKMIGKHKNIINLL----GACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 175
Query: 654 ---------DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDL 704
++ L + +Q+ G+ Y+ + K +HRDL N+L+ + +KI D
Sbjct: 176 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 235
Query: 705 GLARSLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEM 754
GLAR + Y T +W APE L +R YTH D+WS G +L E+
Sbjct: 236 GLARDIHHID----YYKKTTNGRLPVKWM-APEALF-DRIYTHQSDVWSFGVLLWEI 286
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 107 bits (269), Expect = 9e-25
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 34/228 (14%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAF---RNKTDAQRTYREILFLKSFQRHPNIITM 625
G+GA+ V K Q A+K + + R + R R++L I +
Sbjct: 70 GRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVL---VNGDRRWITQL 126
Query: 626 LDIYKAVNNKDLYVVFEYME-----NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACK 680
+ + LY+V EY L+K + + R+ + ++ + +H
Sbjct: 127 H--FAFQDENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 681 VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLT-------EYIATRWYRAPEILI 733
+HRD+KP NIL+D+ I++ D G L + +Y+ +PEIL
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYL------SPEILQ 236
Query: 734 S------NRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
+ Y D W+LG EM + F ST+ IV+
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 105 bits (264), Expect = 1e-24
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 56/259 (21%)
Query: 561 QQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILF 612
++I + +E G+G++G+VY+ + VAIK + E + +R E
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE---AASMRERIEFLNEASV 81
Query: 613 LKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR-----------DKILK 658
+K F +++ +L V + V+ E M DL +R
Sbjct: 82 MKEF-NCHHVVRLL----GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 659 DVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLT 718
+ + ++ +G++Y++A K +HRDL N ++ + ++KIGD G+ R + + T
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-----T 191
Query: 719 EYIATRWYR------------APEILISNRRYTHHVDIWSLGCILAEM--LQSKPLFPGA 764
+Y YR +PE L + +T + D+WS G +L E+ L +P + G
Sbjct: 192 DY-----YRKGGKGLLPVRWMSPESL-KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGL 244
Query: 765 STSHQLQLIVNLVRPNPPH 783
S L+ ++ + P
Sbjct: 245 SNEQVLRFVMEGGLLDKPD 263
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 106 bits (267), Expect = 1e-24
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 55/268 (20%)
Query: 562 QINLLKE-GKGAYGIVYKAY-------DKNNKQYVAIKKIFEAFRNKTDAQRT--YREIL 611
++ L K G+G +G V A VA+K + + + T+ + E+
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD---DATEKDLSDLVSEME 138
Query: 612 FLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--------------- 653
+K +H NII +L + LYV+ EY +L + +R
Sbjct: 139 MMKMIGKHKNIINLL----GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 654 --DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLS 711
++ + + +QL G+ Y+ + K +HRDL N+L+ ++ +KI D GLAR ++
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 712 DSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEM--LQSKPLFP 762
+ Y T +W APE L +R YTH D+WS G ++ E+ L P +P
Sbjct: 255 NID----YYKKTTNGRLPVKWM-APEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YP 307
Query: 763 GASTSHQLQLIVNLVR-PNPPHA-DKFY 788
G +L+ R P + ++ Y
Sbjct: 308 GIPVEELFKLLKEGHRMDKPANCTNELY 335
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 105 bits (264), Expect = 2e-24
Identities = 58/251 (23%), Positives = 99/251 (39%), Gaps = 53/251 (21%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT-- 606
R +LQ K G GA+G V +A ++ VA+K + ++
Sbjct: 44 PRNNLQ----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKS---TAHADEKEAL 96
Query: 607 YREILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIRDK-------- 655
E+ + +H NI+ +L + + V+ EY DL +R K
Sbjct: 97 MSELKIMSHLGQHENIVNLL----GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 656 -------ILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLAR 708
+ + Q+ G++++ + +HRD+ N+L+ KIGD GLAR
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 709 SLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEM--LQSKP 759
+ + YI +W APE + + YT D+WS G +L E+ L P
Sbjct: 213 DIMNDS----NYIVKGNARLPVKWM-APESIF-DCVYTVQSDVWSYGILLWEIFSLGLNP 266
Query: 760 LFPGASTSHQL 770
+PG + +
Sbjct: 267 -YPGILVNSKF 276
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 105 bits (263), Expect = 2e-24
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 52/232 (22%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY--DKNNKQYVAIKKIFEAFRNKTDAQRT--YRE 609
D D++ G+G +G V KA + AIK++ E + E
Sbjct: 23 DWNDIK----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGE 75
Query: 610 ILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR------------- 653
+ L HPNII +L + LY+ EY + +L +R
Sbjct: 76 LEVLCKLGHHPNIINLL----GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 131
Query: 654 ----DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARS 709
L + + + G+ Y+ + +HRDL NIL+ ++ KI D GL+R
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 191
Query: 710 LSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEM 754
Y+ RW A E L YT + D+WS G +L E+
Sbjct: 192 QE-------VYVKKTMGRLPVRWM-AIESLN-YSVYTTNSDVWSYGVLLWEI 234
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 106 bits (267), Expect = 2e-24
Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 39/280 (13%)
Query: 530 SKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE-GKGAYGIVYKAYDKNNKQYV 588
+E + E + + Q+ RED + +LK G+GA+G V KN +
Sbjct: 47 RREKNILEYLEWAKPFTSKVKQMRLHREDFE----ILKVIGRGAFGEVAVVKLKNADKVF 102
Query: 589 AIKKIFEAF---RNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYME 645
A+K + + R +T R R++L I T+ Y ++ +LY+V +Y
Sbjct: 103 AMKILNKWEMLKRAETACFREERDVL---VNGDSKWITTLH--YAFQDDNNLYLVMDYYV 157
Query: 646 -----NDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIK 700
L+K + L + R+ + ++ + +H +HRD+KP NIL+D + I+
Sbjct: 158 GGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIR 215
Query: 701 IGDLGLARSLSDSKECLT-------EYIATRWYRAPEILISN----RRYTHHVDIWSLGC 749
+ D G L + + +YI +PEIL + RY D WSLG
Sbjct: 216 LADFGSCLKLMEDGTVQSSVAVGTPDYI------SPEILQAMEGGKGRYGPECDWWSLGV 269
Query: 750 ILAEMLQSKPLFPGASTSHQLQLIVN--LVRPNPPHADKF 787
+ EML + F S I+N P
Sbjct: 270 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV 309
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 103 bits (260), Expect = 5e-24
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 564 NLLK-EGKGAYGIVYKAYDKNNKQYVAIK---KIFEAFRNKTDAQRTYREILFLKSFQRH 619
+ LK GKG +G V +K +Y A+K K +++ T +L RH
Sbjct: 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL---QNTRH 64
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYME-NDL-NKVIRDKILKDVHIRYIMFQLCNGLSYIH 677
P + + Y + L V EY +L + R+++ + R+ ++ + L Y+H
Sbjct: 65 PFLTALK--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 678 ACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAPEI 731
+ V++RD+K N+++DK IKI D GL KE +++ + Y APE+
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEV 176
Query: 732 LISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
L + Y VD W LG ++ EM+ + F +LI+
Sbjct: 177 L-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 103 bits (259), Expect = 5e-24
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 18/214 (8%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIK--KIFEAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
G G++G V+ ++N +Y A+K K R K + T E L L HP II M
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK-QVEHTNDERLMLSIV-THPFIIRMW 72
Query: 627 DIYKAVNNKDLYVVFEYME-NDLNKVIR-DKILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
++ + + ++++ +Y+E +L ++R + + ++ ++C L Y+H+ +++R
Sbjct: 73 GTFQ--DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 130
Query: 685 DLKPSNILIDKSCSIKIGDLGLARSLSDSKE--CLT-EYIATRWYRAPEILISNRRYTHH 741
DLKP NIL+DK+ IKI D G A+ + D C T +YI APE+ +S + Y
Sbjct: 131 DLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYI------APEV-VSTKPYNKS 183
Query: 742 VDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
+D WS G ++ EML F ++T + I+N
Sbjct: 184 IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 104 bits (262), Expect = 5e-24
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIK-----KIFEAFRNKTDAQRTYREILFLKSFQRHPNII 623
GKG++G V + K+ A+K K E RN+ +I+ HP ++
Sbjct: 24 GKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--RNEVRNVFKELQIM---QGLEHPFLV 78
Query: 624 TMLDIYKAVNNKDLYVVFEYMEN-DLNKVI-RDKILKDVHIRYIMFQLCNGLSYIHACKV 681
+ Y + +D+++V + + DL + ++ K+ ++ + +L L Y+ ++
Sbjct: 79 NL--WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 682 MHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLT-----EYIATRWYRAPEILISNR 736
+HRD+KP NIL+D+ + I D +A L + T Y+ APE+ S +
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYM------APEMFSSRK 190
Query: 737 R--YTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLI 773
Y+ VD WSLG E+L+ + + S++ +++
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 103 bits (259), Expect = 9e-24
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 23/224 (10%)
Query: 564 NLLK-EGKGAYGIVYKAYDKNNKQYVAIKKIFEAF---RNKTDAQRTYREILFLKSFQRH 619
++ GKG++G V A K A+K + + + + T + IL L H
Sbjct: 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR--NH 83
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIH 677
P + + L+ V E++ DL + + + + R+ ++ + L ++H
Sbjct: 84 PFLTQLF--CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 678 ACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAPEI 731
+++RDLK N+L+D K+ D G+ KE + + T Y APEI
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGM------CKEGICNGVTTATFCGTPDYIAPEI 195
Query: 732 LISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
L Y VD W++G +L EML F + + I+N
Sbjct: 196 L-QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 103 bits (258), Expect = 1e-23
Identities = 68/224 (30%), Positives = 95/224 (42%), Gaps = 23/224 (10%)
Query: 564 NLLK-EGKGAYGIVYKAYDKNNKQYVAIK---KIFEAFRNKTDAQRTYREILFLKSFQRH 619
L K GKG++G V+ A K Q+ AIK K + D + T E L H
Sbjct: 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK--DVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVI-RDKILKDVHIRYIMFQLCNGLSYIH 677
P + M ++L+ V EY+ DL I + ++ GL ++H
Sbjct: 78 PFLTHMF--CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 678 ACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAPEI 731
+ +++RDLK NIL+DK IKI D G+ KE + T Y APEI
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGM------CKENMLGDAKTNTFCGTPDYIAPEI 189
Query: 732 LISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
L ++Y H VD WS G +L EML + F G I
Sbjct: 190 L-LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 103 bits (258), Expect = 1e-23
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 564 NLLK-EGKGAYGIVYKAYDKNNKQYVAIKKIFEAF---RNKTDAQRTYREILFLKSFQRH 619
N L GKG++G V + K + A+K + + + + + +L L +
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KP 80
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIH 677
P + + LY V EY+ DL + + K+ H + ++ GL ++
Sbjct: 81 PFLTQLH--SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 678 ACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAPEI 731
+ +++RDLK N+++D IKI D G+ KE + + + T+ Y APEI
Sbjct: 139 SKGIIYRDLKLDNVMLDSEGHIKIADFGM------CKENIWDGVTTKTFCGTPDYIAPEI 192
Query: 732 LISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
+ + + Y VD W+ G +L EML + F G Q I+
Sbjct: 193 I-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 105 bits (262), Expect = 4e-23
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAF---RNKTDAQRTYREILFLKSFQRHPNIITM 625
GKG++G V + K + A+K + + + + + +L L + P + +
Sbjct: 350 GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPPFLTQL 407
Query: 626 LDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMH 683
LY V EY+ DL + + K+ H + ++ GL ++ + +++
Sbjct: 408 H--SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY 465
Query: 684 RDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAPEILISNRR 737
RDLK N+++D IKI D G+ KE + + + T+ Y APEI+ + +
Sbjct: 466 RDLKLDNVMLDSEGHIKIADFGM------CKENIWDGVTTKTFCGTPDYIAPEII-AYQP 518
Query: 738 YTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
Y VD W+ G +L EML + F G Q I+
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
Score = 34.2 bits (78), Expect = 0.33
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 1148 AGEGEARRPEDGGAELPAVL--RGGDEKPGIIALKGHEFLNISYHMPTTCEVCPKPIWHI 1205
+ A P G E +G + + +K H+F + PT C C IW
Sbjct: 2 MADPAAGPPPSEGEESTVRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGF 61
Query: 1206 IR 1207
+
Sbjct: 62 GK 63
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 101 bits (253), Expect = 4e-23
Identities = 58/254 (22%), Positives = 97/254 (38%), Gaps = 48/254 (18%)
Query: 562 QINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILFL 613
I L++ G GA+G VY+ + + VA+K + E ++ E L +
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE---VCSEQDELDFLMEALII 87
Query: 614 KSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--------DKILKDVHI 662
F H NI+ + V + +++ E M DL +R L + +
Sbjct: 88 SKF-NHQNIVRCI----GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 663 RYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCS---IKIGDLGLARSLSDSKECLTE 719
++ + G Y+ +HRD+ N L+ KIGD G+AR +
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-----AS 197
Query: 720 YIAT--------RWYRAPEILISNRRYTHHVDIWSLGCILAEM--LQSKPLFPGASTSHQ 769
Y +W PE + +T D WS G +L E+ L P +P S
Sbjct: 198 YYRKGGCAMLPVKWM-PPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQEV 254
Query: 770 LQLIVNLVRPNPPH 783
L+ + + R +PP
Sbjct: 255 LEFVTSGGRMDPPK 268
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 101 bits (253), Expect = 5e-23
Identities = 55/282 (19%), Positives = 114/282 (40%), Gaps = 29/282 (10%)
Query: 523 KHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQI-----NLLKE-GKGAYGIV 576
+ S + + G E + + +++ LLK G GAYG V
Sbjct: 11 EGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKV 70
Query: 577 Y---KAYDKNNKQYVAIKKIFEAF--RNKTDAQRTYREILFLKSFQRHPNIITMLDIYKA 631
+ K + + A+K + +A + + T E L+ ++ P ++T+ Y
Sbjct: 71 FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL--HYAF 128
Query: 632 VNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPS 689
L+++ +Y+ +L + + + + ++ + ++ L ++H +++RD+K
Sbjct: 129 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLE 188
Query: 690 NILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW-------YRAPEILISNRR-YTHH 741
NIL+D + + + D GL SKE + + + Y AP+I+ +
Sbjct: 189 NILLDSNGHVVLTDFGL------SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKA 242
Query: 742 VDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPH 783
VD WSLG ++ E+L F + I + + P
Sbjct: 243 VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 100 bits (250), Expect = 6e-23
Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 61/243 (25%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT-- 606
R++L L K G+G +G V KA + VA+K + E N + ++
Sbjct: 21 PRKNLV----LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE---NASPSELRDL 73
Query: 607 YREILFLKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR---------- 653
E LK HP++I + + L ++ EY + L +R
Sbjct: 74 LSEFNVLKQVN-HPHVIKLY----GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 654 ---------------DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCS 698
++ L + +Q+ G+ Y+ K++HRDL NIL+ +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 188
Query: 699 IKIGDLGLARSLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCIL 751
+KI D GL+R + + Y+ +W A E L + YT D+WS G +L
Sbjct: 189 MKISDFGLSRDVYEED----SYVKRSQGRIPVKWM-AIESLF-DHIYTTQSDVWSFGVLL 242
Query: 752 AEM 754
E+
Sbjct: 243 WEI 245
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 99.5 bits (249), Expect = 1e-22
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 564 NLLK-EGKGAYGIVY---KAYDKNNKQYVAIKKIFEAF--RNKTDAQRTY--REILFLKS 615
LL+ GKG YG V+ K N + A+K + +A RN D T R IL
Sbjct: 20 ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL---E 76
Query: 616 FQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGL 673
+HP I+ + IY LY++ EY+ +L ++ R+ I + + + ++ L
Sbjct: 77 EVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 674 SYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLAR-SLSDSKECLT-----EYIATRWYR 727
++H +++RDLKP NI+++ +K+ D GL + S+ D T EY+
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM------ 188
Query: 728 APEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
APEIL + VD WSLG ++ +ML P F G + + I+
Sbjct: 189 APEIL-MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 100 bits (250), Expect = 2e-22
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 564 NLLK-EGKGAYGIVYKAYDKNNKQYVAIK---KIFEAFRNKTDAQRTYREILFLKSFQRH 619
+ LK GKG++G V A K + + A+K K + + + R +L +H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV--KH 98
Query: 620 PNIITMLDIYKAVNNKDLYVVFEYMEN--DL-NKVIRDKILKDVHIRYIMFQLCNGLSYI 676
P ++ + + LY V +Y+ N +L + R++ + R+ ++ + L Y+
Sbjct: 99 PFLVGL--HFSFQTADKLYFVLDYI-NGGELFYHLQRERCFLEPRARFYAAEIASALGYL 155
Query: 677 HACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAPE 730
H+ +++RDLKP NIL+D I + D GL KE + T Y APE
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGL------CKENIEHNSTTSTFCGTPEYLAPE 209
Query: 731 ILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
+L + Y VD W LG +L EML P F +T+ I+N
Sbjct: 210 VL-HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 99.3 bits (248), Expect = 2e-22
Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 57/238 (23%)
Query: 561 QQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILF 612
I +++ G+GA+G V++A VA+K + E + + RE
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE---EASADMQADFQREAAL 103
Query: 613 LKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR---------------- 653
+ F +PNI+ +L V K + ++FEYM DLN+ +R
Sbjct: 104 MAEF-DNPNIVKLL----GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158
Query: 654 ---------DKILKDVHIRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDL 704
L I Q+ G++Y+ K +HRDL N L+ ++ +KI D
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADF 218
Query: 705 GLARSLSDSKECLTEYIAT-------RWYRAPEILISNRRYTHHVDIWSLGCILAEML 755
GL+R++ + Y A RW PE + RYT D+W+ G +L E+
Sbjct: 219 GLSRNIYSAD----YYKADGNDAIPIRWM-PPESIF-YNRYTTESDVWAYGVVLWEIF 270
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 99.7 bits (249), Expect = 3e-22
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 24/268 (8%)
Query: 515 LELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQI-----NLLK-E 568
+ H D+ + E+L G ++ ++ + +LL+
Sbjct: 1 MSYYHHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVI 60
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G+G+Y V K + A++ + E + D E + HP ++ +
Sbjct: 61 GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH- 119
Query: 628 IYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHRD 685
L+ V EY+ DL + R + L + H R+ ++ L+Y+H +++RD
Sbjct: 120 -SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 178
Query: 686 LKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAPEILISNRRYT 739
LK N+L+D IK+ D G+ KE L T Y APEIL Y
Sbjct: 179 LKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSTFCGTPNYIAPEIL-RGEDYG 231
Query: 740 HHVDIWSLGCILAEMLQSKPLFPGASTS 767
VD W+LG ++ EM+ + F +S
Sbjct: 232 FSVDWWALGVLMFEMMAGRSPFDIVGSS 259
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 98.8 bits (247), Expect = 3e-22
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 564 NLLK-EGKGAYGIVYKAYDKNNKQYVAIKKIF-EAFRNKTDAQRTYREILFLKSFQRHPN 621
+LL+ G+G+Y V K + A+K + E + D E + HP
Sbjct: 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 71
Query: 622 IITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSYIHAC 679
++ + L+ V EY+ DL + R + L + H R+ ++ L+Y+H
Sbjct: 72 LVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129
Query: 680 KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAPEILI 733
+++RDLK N+L+D IK+ D G+ KE L T Y APEIL
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSTFCGTPNYIAPEIL- 182
Query: 734 SNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTS 767
Y VD W+LG ++ EM+ + F +S
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS 216
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 98.6 bits (246), Expect = 5e-22
Identities = 58/255 (22%), Positives = 99/255 (38%), Gaps = 48/255 (18%)
Query: 561 QQINLLKE-GKGAYGIVYKAY-----DKNNKQYVAIKKIFEAFRNKTDAQRT--YREILF 612
+ I L++ G GA+G VY+ + + VA+K + E ++ E L
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE---VCSEQDELDFLMEALI 127
Query: 613 LKSFQRHPNIITMLDIYKAV--NNKDLYVVFEYMEN-DLNKVIR--------DKILKDVH 661
+ F H NI+ + V + +++ E M DL +R L +
Sbjct: 128 ISKF-NHQNIVRCI----GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 182
Query: 662 IRYIMFQLCNGLSYIHACKVMHRDLKPSNILIDKSCS---IKIGDLGLARSLSDSKECLT 718
+ ++ + G Y+ +HRD+ N L+ KIGD G+AR +
Sbjct: 183 LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-----A 237
Query: 719 EY--------IATRWYRAPEILISNRRYTHHVDIWSLGCILAEM--LQSKPLFPGASTSH 768
Y + +W PE + +T D WS G +L E+ L P +P S
Sbjct: 238 GYYRKGGCAMLPVKWM-PPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMP-YPSKSNQE 294
Query: 769 QLQLIVNLVRPNPPH 783
L+ + + R +PP
Sbjct: 295 VLEFVTSGGRMDPPK 309
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 96.1 bits (240), Expect = 2e-21
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 26/226 (11%)
Query: 564 NLLK-EGKGAYGIVY---KAYDKNNKQYVAIKKIFEAFRNKTDAQRTY--REILFLKSFQ 617
LLK G+G++G V+ K + +Q A+K + +A D RT R+IL
Sbjct: 27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL---VEV 83
Query: 618 RHPNIITMLDIYKAVNNKDLYVVFEYMEN-DL-NKVIRDKILKDVHIRYIMFQLCNGLSY 675
HP I+ + Y LY++ +++ DL ++ ++ + + +++ + +L L +
Sbjct: 84 NHPFIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 676 IHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRAP 729
+H+ +++RDLKP NIL+D+ IK+ D GL SKE + Y AP
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGL------SKESIDHEKKAYSFCGTVEYMAP 195
Query: 730 EILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
E++ + R +T D WS G ++ EML F G + +I+
Sbjct: 196 EVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 98.3 bits (245), Expect = 2e-21
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 507 EKEKTMKELE-----LKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQ 561
E+E+ ++ LK A S S S +E EV K ++ +
Sbjct: 95 EREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMN------ 148
Query: 562 QINLLK-EGKGAYGIVYKAYDKNNKQYVAIKKIFEAF---RNKTDAQRTYREILFLKSFQ 617
+ LK GKG +G V +K +Y A+K + + +++ T +L
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL---QNS 205
Query: 618 RHPNIITMLDIYKAVNNKDLYVVFEYME-NDL-NKVIRDKILKDVHIRYIMFQLCNGLSY 675
RHP + + Y + L V EY +L + R+++ + R+ ++ + L Y
Sbjct: 206 RHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 676 IHACK-VMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW------YRA 728
+H+ K V++RDLK N+++DK IKI D GL KE + + + Y A
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKTFCGTPEYLA 317
Query: 729 PEILISNRRYTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVN 775
PE+L + Y VD W LG ++ EM+ + F +LI+
Sbjct: 318 PEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 363
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment
2, heavy meromyosin, essential light chain, motor
protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1
PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 94.9 bits (236), Expect = 1e-19
Identities = 56/357 (15%), Positives = 129/357 (36%), Gaps = 20/357 (5%)
Query: 108 KLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNILATLEMERDTLQQEVATLQAKISQ 167
L ++ + EL K ++ EL+ LE + L +E LQ K+
Sbjct: 848 PLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKE----LEQKHTQLCEEKNLLQEKLQA 903
Query: 168 ERSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECRLQALN 227
E +A + L + Q L L + R + E ++ L + ++++ L
Sbjct: 904 ETELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQM--LDLE 961
Query: 228 TELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRM 287
+LE + +L + K+ +E + + + + + + +
Sbjct: 962 EQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNL- 1020
Query: 288 VNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQI 347
E K L L KH S +S E L ++ + +K +L + DL +QI
Sbjct: 1021 ----AEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQI 1076
Query: 348 NLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAM 407
L+ ++ + + + +++ A+ S + + L++ L ++
Sbjct: 1077 AELQA--QIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLES 1134
Query: 408 LREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHELKEELDER 464
+ A+ E++ L +++ L+ +LE + + ++ D++
Sbjct: 1135 EKAARNKAEKQKRDLSE-------ELEALKTELEDTLDTTATQQELRGSDYKDDDDK 1184
Score = 93.4 bits (232), Expect = 3e-19
Identities = 61/365 (16%), Positives = 151/365 (41%), Gaps = 32/365 (8%)
Query: 20 QANGELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLK 79
++ ++ + E+ + +ERQ++ + + + + T L +E L++ L
Sbjct: 850 LKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYA 909
Query: 80 ESQRRADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVE 139
E++ + K++ E +++ +M +++ E E + +L+ + ++ +Q +++
Sbjct: 910 EAEEMRVRLAAKKQELE---EILHEMEARIEEEEERSQQLQAEKKKM-------QQQMLD 959
Query: 140 LQNILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHR 199
L+ L E R LQ E T KI + + + +L + L +
Sbjct: 960 LEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVS----- 1014
Query: 200 ELQLAEDNRHLGEKVSSLEKE-CRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKEC 258
L + EK +L K + +++ +ELE +E + ++ + K LE E
Sbjct: 1015 --DLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRK---LEGES 1069
Query: 259 ASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESL 318
+ L ++ QAQ + + Q ++ + +A++ +++ + ES
Sbjct: 1070 SDLHEQIAELQAQIAE-----LKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESH 1124
Query: 319 LSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKF 378
+S+ +E K + ++ K + DL +++ L+ ELE + + ++ + +
Sbjct: 1125 ISDLQEDLESEKAARNKAEKQKRDLSEELE------ALKTELEDTLDTTATQQELRGSDY 1178
Query: 379 SLQSD 383
D
Sbjct: 1179 KDDDD 1183
Score = 82.2 bits (203), Expect = 8e-16
Identities = 79/440 (17%), Positives = 182/440 (41%), Gaps = 33/440 (7%)
Query: 133 GEQMVVELQNILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEG--RLQA-L 189
G+ + +LA LE ERD +V + ++ ++LE +Q +
Sbjct: 769 GQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNV 828
Query: 190 NTELERNKHRELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGE 249
+ + + L + + +E +QA + EL+R K R+ + + + L +
Sbjct: 829 RSFMNVXHWPWMXLF---FXIXPLLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQ 885
Query: 250 KVSSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHR 309
K + L +E L +L+A + E+ A E + R+ K++ EI+ E+
Sbjct: 886 KHTQLCEEKNLLQEKLQA-----ETELYAEAEEMRVRLAAKKQELEEILHEM-------- 932
Query: 310 SDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSK-TLQS 368
E+ + +ER + ++ + DL++Q+ + RQ+L+ K T
Sbjct: 933 ------EARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEA---ARQKLQLEKVTADG 983
Query: 369 QVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKRSV 428
++++ + ++ + T E L+ R L+ +A E +N+ + +K ++ S
Sbjct: 984 KIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISE 1043
Query: 429 EDLQMKELQDQLETEQYFSTLYKTQAHELKEELDERSRNILELEEERGDLTHRLQLAVAR 488
++++K+ + + + + ++ +L E++ E I EL+ + LQ A+AR
Sbjct: 1044 LEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALAR 1103
Query: 489 ADSEALARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKS 548
+ E ++ A + + ELE + +L++ + ++ + E + E K
Sbjct: 1104 LEDETSQKNNALKKIRELESHIS----DLQEDLESEKAARNKAEKQKRDLSEELEALKTE 1159
Query: 549 IDQLMKDREDLQQQINLLKE 568
++ + Q+ +
Sbjct: 1160 LEDTLDTTATQQELRGSDYK 1179
Score = 62.9 bits (153), Expect = 6e-10
Identities = 34/206 (16%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 919 ELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSN 978
E + K + + + + + ++ + + ++L K+R+ L+++++ L L +
Sbjct: 966 EEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEE 1025
Query: 979 SSEEMEKLHKQLKQ------EQLLKAQAVNKLAEIMNRK---------DINTTCKGKSKA 1023
++ + KL + + +L K + + E + RK + + +
Sbjct: 1026 KAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAE 1085
Query: 1024 SSADVRKKEKECRKLQQELTQEREKFNQVVVK---CQKELQELQSQVVEENTSKLKLQME 1080
A + KKE+E + L E + N + K + + +LQ + E ++ K + +
Sbjct: 1086 LKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQ 1145
Query: 1081 LDSKDSEIEQLQGKLAALGSETASLS 1106
E+E L+ +L TA+
Sbjct: 1146 KRDLSEELEALKTELEDTLDTTATQQ 1171
Score = 62.2 bits (151), Expect = 1e-09
Identities = 30/189 (15%), Positives = 81/189 (42%), Gaps = 10/189 (5%)
Query: 919 ELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSN 978
E ++ + +++ + + + +E+ + + + +L ++ +I +++++
Sbjct: 938 EEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDI---LI 994
Query: 979 SSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKKEKECRKL 1038
++ KL K+ K + + LAE + T K K ++ +++ + K+ K
Sbjct: 995 MEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKS 1054
Query: 1039 QQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAAL 1098
+QEL + + K + E +L Q+ E +L+ +L K+ E++ +L
Sbjct: 1055 RQELEKIKRKL-------EGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDE 1107
Query: 1099 GSETASLSS 1107
S+ +
Sbjct: 1108 TSQKNNALK 1116
Score = 61.0 bits (148), Expect = 2e-09
Identities = 61/306 (19%), Positives = 113/306 (36%), Gaps = 43/306 (14%)
Query: 792 KSKHEREKFNQVVVKCQ---KELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAA 848
E ++ K Q + L E+++++ EE +LQ E ++ L+ +L
Sbjct: 907 LYAEAEEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEE 966
Query: 849 LGSETASLSSADVENDESYVQDSRLEGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSE 908
+ L V D + ++E + I QN K +K S E
Sbjct: 967 EEAARQKLQLEKVTADG---KIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEE 1023
Query: 909 NDKQNTDPELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINL 968
+K L L KH S +S E L ++ + +K +L + DL +QI
Sbjct: 1024 EEKAK-----NLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAE 1078
Query: 969 LKEEL----RKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKAS 1024
L+ ++ + + EE++ +L+ E K A+ K+ E+
Sbjct: 1079 LQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIREL----------------- 1121
Query: 1025 SADVRKKEKECRKLQQELTQEREKFNQV---VVKCQKELQELQSQVVEENTSKLKLQMEL 1081
E LQ++L E+ N+ +EL+ L+++ +E+ Q EL
Sbjct: 1122 -------ESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTE-LEDTLDTTATQQEL 1173
Query: 1082 DSKDSE 1087
D +
Sbjct: 1174 RGSDYK 1179
Score = 54.8 bits (132), Expect = 2e-07
Identities = 27/154 (17%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 954 QLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDI 1013
+ ++ + +++ KE +K+ +E+E+ H QL +E+ L + + E+ +
Sbjct: 854 RQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAE- 912
Query: 1014 NTTCKGKSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTS 1073
+ + A ++ + E +E + ++ K Q+++ +L+ Q+ EE +
Sbjct: 913 --EMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAA 970
Query: 1074 KLKLQMELDSKDSEIEQLQGKLAALGSETASLSS 1107
+ KLQ+E + D +I++++ + + + L+
Sbjct: 971 RQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTK 1004
Score = 53.7 bits (129), Expect = 4e-07
Identities = 35/202 (17%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 925 AKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRK-SSNSSEEM 983
+ ++ +K+ L KER+ + + +L + L ++ NLL+E+L+ + +E
Sbjct: 853 TRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAE 912
Query: 984 EKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKKEKECRKLQ---Q 1040
E + ++Q L+ A I ++ + + A+ +K +++ L+ +
Sbjct: 913 EMRVRLAAKKQELEEILHEMEARIEEEEERS-------QQLQAEKKKMQQQMLDLEEQLE 965
Query: 1041 ELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGS 1100
E R+K V ++++++ ++ KL E + + L LA
Sbjct: 966 EEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEE 1025
Query: 1101 ETASLSSADVENDESYVQDEVR 1122
+ +L+ +++ + EVR
Sbjct: 1026 KAKNLTKLKNKHESMISELEVR 1047
Score = 51.4 bits (123), Expect = 2e-06
Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 19/220 (8%)
Query: 794 KHEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSET 853
+ R+K V ++++++ ++ KL E + + L LA +
Sbjct: 968 EAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKA 1027
Query: 854 ASLSSA----DVENDESYVQDSRLEGWVSIPNKQNIKRHGWKKQYV--VVSSKKIIFYNS 907
+L+ + E V+ + E K K G + + I +
Sbjct: 1028 KNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQI---A 1084
Query: 908 ENDKQNTDPELELKDLMAKHRSDLSSKESLLSNGKEREVDY----------KKSIDQLMK 957
E Q E EL+ +A+ + S K + L +E E K + ++ K
Sbjct: 1085 ELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEK 1144
Query: 958 DREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLK 997
+ DL +++ LK EL + +++ ++L ++ K
Sbjct: 1145 QKRDLSEELEALKTELEDTLDTTATQQELRGSDYKDDDDK 1184
Score = 44.1 bits (104), Expect = 4e-04
Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 14/189 (7%)
Query: 917 ELELKDLMAKHRSDLSSKESL-------LSNGKEREVDYKKSIDQLMKDREDLQQQINLL 969
E ELK+L KH K L E E + + + E L + +
Sbjct: 877 EAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARI 936
Query: 970 KEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVR 1029
+EE +S E +K+ +Q+ L+ Q + A + T GK K D+
Sbjct: 937 EEEEERSQQLQAEKKKMQQQMLD---LEEQLEEEEAARQKLQLEKVTADGKIKKMEDDIL 993
Query: 1030 KKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIE 1089
E + KL +E E+ + + L E + + K K + + + ++
Sbjct: 994 IMEDQNNKLTKERKLLEERVSDL----TTNLAEEEEKAKNLTKLKNKHESMISELEVRLK 1049
Query: 1090 QLQGKLAAL 1098
+ + L
Sbjct: 1050 KEEKSRQEL 1058
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 84.9 bits (211), Expect = 9e-18
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 564 NLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQ-RTYREILFLKSFQRHPNI 622
N+L G+G +G VYK + VA+K++ E + Q +T E+ + S H N+
Sbjct: 36 NIL--GRGGFGKVYKGRLADGTL-VAVKRLKEERTQGGELQFQT--EVEMI-SMAVHRNL 89
Query: 623 ITMLDIYKAVNNKDLYVVFEYMEND-----LNKVIRDKILKDVHIRY-IMFQLCNGLSYI 676
+ + + L V+ YM N L + + D R I GL+Y+
Sbjct: 90 LRLRGFCMTPTERLL--VYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 147
Query: 677 H-AC--KVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIA-TRWYRAPEIL 732
H C K++HRD+K +NIL+D+ +GD GLA+ + +T + T + APE L
Sbjct: 148 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 207
Query: 733 ISNRRYTHHVDIWSLGCILAEML 755
+ + + D++ G +L E++
Sbjct: 208 STGKS-SEKTDVFGYGVMLLELI 229
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 88.0 bits (217), Expect = 1e-17
Identities = 91/646 (14%), Positives = 209/646 (32%), Gaps = 159/646 (24%)
Query: 428 VEDLQMKELQDQLETEQYFSTLYKTQAHELKEELD--ERSRNILE-LEEERGDLTHRLQL 484
V++ K++QD + S L K + + D + + L ++ ++ +
Sbjct: 30 VDNFDCKDVQDMPK-----SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84
Query: 485 AVARADSEALARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSKESLLSNGKEREVD 544
V R + + L I E ++ +M + + R L + + + + V
Sbjct: 85 EVLRINYKFLMSPIKTEQ-----RQPSMMT----RMYIEQRDRLYNDNQVFA---KYNVS 132
Query: 545 YKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQ 604
+ +L + +L+ N+L +G G K +VA+ + +
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSG----------KTWVAL----DVCLSYKVQC 178
Query: 605 RTYREI--LFLKSFQRHPNIITMLD--IYKAVNN--------KDLYVVFEYMENDLNKVI 652
+ +I L LK+ ++ ML +Y+ N ++ + ++ +L +++
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 653 RDK-------ILKDV----HIRYIMFQLCNGLSYIHACKVM--HRDLKPSNILI-DKSCS 698
+ K +L +V CK++ R + ++ L +
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLS----------CKILLTTRFKQVTDFLSAATTTH 288
Query: 699 IKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSK 758
I + + + + K L +Y+ R P E+L +
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR----------------------EVLTTN 326
Query: 759 PLFPGASTSHQLQLIVNLVRPNPPHADKFYAGFKSKH-EREKFNQVVVKCQKELQ--ELQ 815
P +L +I +R D + KH +K ++ L+ E +
Sbjct: 327 PR--------RLSIIAESIRDGLATWDNW------KHVNCDKLTTIIESSLNVLEPAEYR 372
Query: 816 SQ-----VVEEN---TSKLKLQMEL--DSKDSEIEQLQGKLAALGSETASLSSADVENDE 865
V + + L L + + D S++ + KL SL +
Sbjct: 373 KMFDRLSVFPPSAHIPTIL-LSL-IWFDVIKSDVMVVVNKL-----HKYSLVEKQPKEST 425
Query: 866 SYVQDSRLEGWVSIPNKQNIKRHGWKKQYVVVSSKKII-FYNSENDKQNTDPELELKD-- 922
+ LE V + N+ + H + I+ YN + D D
Sbjct: 426 ISIPSIYLELKVKLENEYAL--H-----------RSIVDHYNIPKTFDSDDLIPPYLDQY 472
Query: 923 --------LMAKHRSDLSSK-ESLLSNGK--EREVDYKKSIDQLMKDREDLQQQINLLKE 971
L + + + + + E+++ + + + QQ+ K
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532
Query: 972 ELRKSSNSSEEMEK-LHKQLKQ--EQLLKAQAVN--KLAEIMNRKD 1012
+ + E + + L + E L+ ++ + ++A +M +
Sbjct: 533 YICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA-LMAEDE 577
Score = 85.7 bits (211), Expect = 6e-17
Identities = 82/664 (12%), Positives = 194/664 (29%), Gaps = 182/664 (27%)
Query: 509 EKTMKELELKDLMAKHRSDLSSKE-SLLSNGKEREVDYKKSIDQLMKDREDLQQQI--NL 565
+ + + KD+ +S LS +E + K+ + L+ +E++ Q+ +
Sbjct: 27 DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV 86
Query: 566 LKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNK--TDAQR-----TYREILF------ 612
L+ Y + +Q + +++ R++ D Q R +
Sbjct: 87 LRIN---YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA 143
Query: 613 LKSFQRHPNIIT--MLDIYKAVNNKDLYVVFEYMENDL-NKVIRDKILKDV---HIRYIM 666
L + N++ +L K + V ++ I ++
Sbjct: 144 LLELRPAKNVLIDGVLGSGKTW---------------VALDVCLSYKVQCKMDFKIFWLN 188
Query: 667 FQLCN--GLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATR 724
+ CN K++++ D S +IK+ + + L + ++
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL-------RIHSIQAELRRLLKSK 241
Query: 725 WYRAPEILISNRRYTHHV--DIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPP 782
Y L+ V ++ + A L K L T+ Q+ L
Sbjct: 242 PY--ENCLL--------VLLNVQNAKAWNAFNLSCKILL----TTRFKQVTDFLSAATTT 287
Query: 783 HADKFYAGFKSKHEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQL 842
H H E++ L + ++ L ++ L
Sbjct: 288 H-------ISLDHHSMTLT------PDEVKSLLLKYLDCRPQDLPREV-----------L 323
Query: 843 QGKLAALGSETASLSSADVENDESYVQDSRLEGWVSIPNKQNIKRHGWKKQYVVVSSKKI 902
L S+ + + + + + W K I
Sbjct: 324 TTNPRRL-----SIIAESIRDGL-----ATWDNW---------------KHVNCDKLTTI 358
Query: 903 IFYNSENDKQNTDPELELKDL---MAKHRSDLSSKESLLS----NGKEREVD------YK 949
I E+ +P E + + ++ LLS + + +V +K
Sbjct: 359 I----ESSLNVLEPA-EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413
Query: 950 KSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQE---------------- 993
S+ + K ++ I + EL+ E LH+ +
Sbjct: 414 YSL--VEKQPKESTISIPSIYLELKV---KLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 994 -----------QLLKAQAVNKLAEI---------MNRKDINTTCKGKSKASSADVRKKEK 1033
L + ++ + +K + + + S + +
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL---Q 525
Query: 1034 ECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEI----- 1088
+ + + + K+ ++V L +++ ++ + L L++ L ++D I
Sbjct: 526 QLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDL-LRIALMAEDEAIFEEAH 584
Query: 1089 EQLQ 1092
+Q+Q
Sbjct: 585 KQVQ 588
Score = 83.7 bits (206), Expect = 2e-16
Identities = 108/692 (15%), Positives = 205/692 (29%), Gaps = 182/692 (26%)
Query: 63 EMGQLE-KNLTILRH---DLKESQRRADNESETK---KKAEVNLQVISDMHEKLKTEAET 115
E G+ + + IL ++ D + K K E++ +I K
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HII-----MSKDAVSG 63
Query: 116 ATRLRKQSAELTVAKSAGEQMVVELQNILATLEMERDTLQQEVATLQAKISQERSSKTQA 175
RL S E+MV + +E + L+ L + I E+ +
Sbjct: 64 TLRL------FWTLLSKQEEMVQKF--------VE-EVLRINYKFLMSPIKTEQRQPSMM 108
Query: 176 VNLHKELEGRLQALNTEL-ERNKHRELQLAEDNRHLGEKVSSLEKECRL----------Q 224
++ E RL N + N R + L + + L +
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK----LRQALLELRPAKNVLIDGVLGSGKT 164
Query: 225 ALNTELERNKHRELQLAEDNR----HLGEKVSSLEKECASLSLELKAAQAQYQQEVRAHE 280
+ ++ + ++Q D + +L C S L+ Q Q + +
Sbjct: 165 WVALDVCLSY--KVQCKMDFKIFWLNLKN--------CNSPETVLEMLQKLLYQ-IDPNW 213
Query: 281 ETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDR 340
++ N + I EL+ L+ + LL V K+ +
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPY----ENCLLV---LLNVQNAKAWNAF---- 262
Query: 341 EDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQT-SEAAHLKAREE 399
+L +I LL + K + + SL T E L +
Sbjct: 263 -NLSCKI-LL---------TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK-- 309
Query: 400 QLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQM--KELQDQLETEQYFSTLYKTQAHEL 457
L L + + L + + ++D L T +K +
Sbjct: 310 YLDCRPQDLPREVLTT----NPRR-------LSIIAESIRDGLATWDN----WKHVNCDK 354
Query: 458 KEELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEETVGEL-------EKEK 510
+ E S N+LE E R +L+V + I + + +
Sbjct: 355 LTTIIESSLNVLEPAEYR---KMFDRLSVFPPSAH-----IPTILLSLIWFDVIKSDVMV 406
Query: 511 TMKELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGK 570
+ +L L+ K + + S+ S ++ K ++ + L + I
Sbjct: 407 VVNKLHKYSLVEKQPKESTI--SIPS----IYLELKVKLE----NEYALHRSI------V 450
Query: 571 GAYGIVYKAYDKNNK----------QYVA--IKKI-----FEAFRNKTDAQRTYREILFL 613
Y I K +D ++ ++ +K I FR + + FL
Sbjct: 451 DHYNI-PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR------MVFLDFRFL 503
Query: 614 KSFQRHP-----------NIITMLDIYKA--VNNKDLYVVFEYMENDL--------NKVI 652
+ RH N + L YK +N Y E + N + +I
Sbjct: 504 EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY---ERLVNAILDFLPKIEENLI 560
Query: 653 RDKILKDVHIRYIMFQLCNGLSYIHACKVMHR 684
K + I +M + + + A K + R
Sbjct: 561 CSKYTDLLRIA-LMAE--DEAIFEEAHKQVQR 589
Score = 67.2 bits (163), Expect = 3e-11
Identities = 92/628 (14%), Positives = 186/628 (29%), Gaps = 171/628 (27%)
Query: 642 EYMENDLNKVIRDKILKDVHIRYIMFQLCNGLS---YIHACKVMHRDLKPSNILIDKSCS 698
+Y D+ V D + + + + + LS H + L S
Sbjct: 15 QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG-TLRLFWTLLS 73
Query: 699 IKIGDLGLARSLSDSKECLTEYIATRW---YRAPEILISNRRYTHHVDIWSLGCILAEML 755
+ + + + + +++ + R P + R Y D +
Sbjct: 74 --KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS--MMTRMYIEQRD---------RLY 120
Query: 756 QSKPLFPGASTS-----HQLQLIVNLVRPNPP---HADKFYAGF-KSKHEREKFNQVVVK 806
+F + S +L+ + +RP G K+ V
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV---LGSGKT---------WVA- 167
Query: 807 CQKELQELQSQVVEENTSK----LKLQMELDSKDSEIEQLQGKLAALGSETASLSSADVE 862
L S V+ L L+ +S ++ +E LQ L + S S
Sbjct: 168 ----LDVCLSYKVQCKMDFKIFWLNLK-NCNSPETVLEMLQKLLYQIDPNWTSRS----- 217
Query: 863 NDESYVQDSRLEGWVSIPNKQNIKRHGWKKQY----VV---VSSKKII--FYNS------ 907
D S R+ + ++R K Y +V V + K F S
Sbjct: 218 -DHSSNIKLRIHSI-----QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT 271
Query: 908 ENDKQNTDPELELKDLMAKHRSDLSSKESL--LSNGKEREVDYKKSIDQLMKD--REDLQ 963
KQ TD L A + +S L+ + + + K +D +D RE L
Sbjct: 272 TRFKQVTD------FLSAATTTHISLDHHSMTLTPDEVKSL-LLKYLDCRPQDLPREVLT 324
Query: 964 ---QQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKA--QAVNKLAEIMNR-------- 1010
++++++ E +R + + K + ++L ++N L R
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNW----KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 1011 --KDINTTCKGKS----KASSADVRKKEKECRKLQQELTQEREKFN-------QVVVKCQ 1057
+ S +DV + K L +++ K + + +K +
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK--YSLVEKQPKESTISIPSIYLELKVK 438
Query: 1058 -KELQELQSQVVE----------ENTSKLKL-------------QMELDSKDSEIEQ--- 1090
+ L +V+ ++ L +E + +
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498
Query: 1091 ----LQGKLAALGSETASLSS-----ADVENDESYV--QDEVRSRSVT---------QGD 1130
L+ K+ + + S ++ + Y+ D R V + +
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEEN 558
Query: 1131 VIRADAKDIPRIFQLLYAGEG---EARR 1155
+I + D+ RI L+ E EA +
Sbjct: 559 LICSKYTDLLRI-ALMAEDEAIFEEAHK 585
Score = 54.1 bits (129), Expect = 3e-07
Identities = 73/545 (13%), Positives = 158/545 (28%), Gaps = 157/545 (28%)
Query: 738 YTHHVDIWSLGCILAEMLQSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYAGFKSKHER 797
+ HH+D E + + +Q + I+ D F F K +
Sbjct: 3 HHHHMDF--------ETGEHQ---------YQYKDIL------SVFEDAFVDNFDCKDVQ 39
Query: 798 EKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQ-----LQGKLAALGSE 852
+ ++ K +E+ + + + L ++ +++ L+ L S
Sbjct: 40 DMPKSILSK--EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP 97
Query: 853 TASLSSADVENDESYV-QDSRLEGWVSIPNKQNIKR----------------------HG 889
+ Y+ Q RL + K N+ R G
Sbjct: 98 IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157
Query: 890 WK---KQYV---VVSSKKI-------IFYNSENDKQNTDPELE-LKDLMAKHRSDLSSKE 935
K +V V S K+ IF+ + + + + LE L+ L+ + + +S+
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217
Query: 936 SLLSNGKEREVDYKKSIDQLMKDRE--------------------DLQQQI--------- 966
SN K R + + +L+K + +L +I
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277
Query: 967 -NLLKEELRKSSNSSEEMEKLHKQLKQEQLLKA--QAVNKLAEIMNRKDINTTCKGKSKA 1023
+ L + L + LLK L + +
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV--------LTTNPRR 329
Query: 1024 SS--ADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMEL 1081
S A+ ++ +K ++ L+ + + K+ ++ +
Sbjct: 330 LSIIAE-SIRDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPAEYR-------KMFDRLSV 380
Query: 1082 DSKDSEI-EQLQGKLAALGSETASLSSADVENDESYVQDEVRSRSVTQGDVIRADAKD-- 1138
+ I L L+ + + +++D V +++ S+ + K+
Sbjct: 381 FPPSAHIPTIL---LSLIWFD-------VIKSDVMVVVNKLHKYSL-----VEKQPKEST 425
Query: 1139 --IPRIFQLLYAGEGEARRPEDGGAEL----------PAVLRGGDEKPGIIALKGHEFLN 1186
IP I+ L + + L P D P L + + +
Sbjct: 426 ISIPSIYLEL-------KVKLENEYALHRSIVDHYNIPKTFDSDDLIP--PYLDQYFYSH 476
Query: 1187 ISYHM 1191
I +H+
Sbjct: 477 IGHHL 481
Score = 46.8 bits (110), Expect = 6e-05
Identities = 60/458 (13%), Positives = 123/458 (26%), Gaps = 148/458 (32%)
Query: 6 LHG----------------FQVDNAIPNG------GQANGELKDLLERERREMSQLEERQ 43
+ G ++V + N + +LE ++ + Q++
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN-SPETVLEMLQKLLYQIDPNW 213
Query: 44 RQLSEQYEAVSARETALRDEMGQL------EKNLTILRH----------DLK-------E 80
S+ + R +++ E+ +L E L +L + +L
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 81 SQRRADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRK----QSAELTVAKSAGEQM 136
++ D S + D H T E + L K + +L
Sbjct: 274 FKQVTDFLSAATTT-----HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328
Query: 137 VVELQNILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERN 196
+ +I+A ++ +AT + L +E L L R
Sbjct: 329 RL---SIIAES------IRDGLATW------DNWKHVNCDKLTTIIESSLNVLEPAEYRK 373
Query: 197 KHRELQLAEDNRHLGEKV-----------------------SSLEKE-----CRLQALNT 228
L + + H+ + S +EK+ + ++
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL 433
Query: 229 EL------ERNKHREL----------------QLAEDN-------RHL-----GEKVSSL 254
EL E HR + D HL E+++
Sbjct: 434 ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF 493
Query: 255 EKECASLS-LELKAAQAQYQQEVRAHE-------ETQKSRMVNKEEASVEIVKELKDLMA 306
LE K + K + + + +V + D +
Sbjct: 494 RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLP 553
Query: 307 KHRSDL-SSKES-----LLSNGKEREVDYKKSIDQLMK 338
K +L SK + L E E ++++ Q+ +
Sbjct: 554 KIEENLICSKYTDLLRIALMA--EDEAIFEEAHKQVQR 589
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 81.9 bits (201), Expect = 1e-16
Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 62/245 (25%)
Query: 564 NLLKEGKGAYGIVYKAYDKNNKQYVAIKKI------FEAFRNKTDAQRTYREILFLKSFQ 617
K G+G +G V++ + VAIK I ++ + EI+ K
Sbjct: 24 RCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELS 81
Query: 618 --------RHPNIITMLDIY----------------------------KAVNNKDLYVVF 641
R I + ++ + L++V
Sbjct: 82 LLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVL 141
Query: 642 EYMEN--DLNKVIRDKILKDVHIRYIMFQLCNGLSYIH-ACKVMHRDLKPSNILIDKSCS 698
E+ DL + +R K+ + I+ QL L+ + + HRDL N+L+ K+
Sbjct: 142 EFEFGGIDLEQ-MRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSL 200
Query: 699 IKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSK 758
K+ +S I + + I + R + ++ +
Sbjct: 201 KKLHYTLNGKSS---------TIPSCGLQVSIIDYTLSRLE-----RDGIVVFCDVSMDE 246
Query: 759 PLFPG 763
LF G
Sbjct: 247 DLFTG 251
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 81.1 bits (201), Expect = 2e-16
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQ-----RTYREILFLKSFQRHPNII 623
G G +G VYK ++ + VA+K+ R +Q T EI L SF RHP+++
Sbjct: 48 GHGVFGKVYKGVLRDGAK-VALKR-----RTPESSQGIEEFET--EIETL-SFCRHPHLV 98
Query: 624 TMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVH----IRY-IMFQLCNGLSYIH 677
+++ N L +++YMEN +L + + L + R I GL Y+H
Sbjct: 99 SLIGFCDERNEMIL--IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 678 ACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW-----YRAPEIL 732
++HRD+K NIL+D++ KI D G+++ ++ + +++T Y PE
Sbjct: 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ---THLSTVVKGTLGYIDPEYF 213
Query: 733 ISNRRYTHHVDIWSLGCILAEMLQSKP 759
I R T D++S G +L E+L ++
Sbjct: 214 IKG-RLTEKSDVYSFGVVLFEVLCARS 239
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil,
cytoplasm, membrane, metal-binding, nucleotide-binding,
phorbol-ester binding; NMR {Rattus norvegicus}
Length = 117
Score = 74.3 bits (182), Expect = 5e-16
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 871 SRLEGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPELELKDLMAKHRSD 930
SRLEGW+S+P + N K+ GW K+YV+VSSKKI+FY+SE DK+ ++P + L D+
Sbjct: 1 SRLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVL-DIDKLFHVR 59
Query: 931 LSSKESLLSNGKEREVDYKKSI 952
++ + +E+ I
Sbjct: 60 -PVTQTDVYRADAKEIPRIFQI 80
Score = 38.5 bits (89), Expect = 0.002
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 1124 RSVTQGDVIRADAKDIPRIFQLLYAGEGEARR 1155
R VTQ DV RADAK+IPRIFQ+LYA EG +
Sbjct: 59 RPVTQTDVYRADAKEIPRIFQILYANEGISSA 90
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 79.1 bits (196), Expect = 7e-16
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 555 DREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQ--RTYR-EIL 611
D + N + G+G +G+VYK Y N VA+KK+ A + T + + + EI
Sbjct: 28 DERPISVGGNKM--GEGGFGVVYKGYVNN--TTVAVKKL-AAMVDITTEELKQQFDQEIK 82
Query: 612 FLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEND-----LNKVIRDKILKDVHIRY-I 665
+ Q H N++ +L ++ L V+ YM N L+ + L H+R I
Sbjct: 83 VMAKCQ-HENLVELLGFSSDGDDLCL--VYVYMPNGSLLDRLSCLDGTPPL-SWHMRCKI 138
Query: 666 MFQLCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRW 725
NG++++H +HRD+K +NIL+D++ + KI D GLAR+ + + +R
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ---TVMTSRI 195
Query: 726 -----YRAPEILISNRRY-----THHVDIWSLGCILAEML 755
Y APE T DI+S G +L E++
Sbjct: 196 VGTTAYMAPE-------ALRGEITPKSDIYSFGVVLLEII 228
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 73.2 bits (180), Expect = 6e-14
Identities = 55/210 (26%), Positives = 82/210 (39%), Gaps = 37/210 (17%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
K G G++G +Y D + VAIK E KT + + E K Q I T+
Sbjct: 16 KIGSGSFGDIYLGTDIAAGEEVAIK--LE--CVKTKHPQLHIESKIYKMMQGGVGIPTI- 70
Query: 627 DIYKAVNNKDLYVVFEYMENDLNKVIRDKI----LKDVHIRYIMFQLCNGLSYIHACKVM 682
+ +V E + L + LK V + + Q+ + + YIH+ +
Sbjct: 71 -RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFI 127
Query: 683 HRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRW---YRAPEILISNR 736
HRD+KP N L+ K + I D GLA+ D++ T YR + L
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR--------THQHIPYRENKNLTGTA 179
Query: 737 RY----TH-------HVDIWSLGCILAEML 755
RY TH D+ SLG +L
Sbjct: 180 RYASINTHLGIEQSRRDDLESLGYVLMYFN 209
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm,
membrane, metal-binding, nucleotide-binding,
phorbol-ester binding; NMR {Rattus norvegicus}
Length = 84
Score = 65.9 bits (160), Expect = 2e-13
Identities = 26/44 (59%), Positives = 30/44 (68%)
Query: 1171 DEKPGIIALKGHEFLNISYHMPTTCEVCPKPIWHIIRPPPALEC 1214
EK I KGHEF+ YH PT CE C KP+WH+ +PPPALEC
Sbjct: 14 GEKSNYICHKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALEC 57
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 70.5 bits (173), Expect = 4e-13
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 33/209 (15%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
+ G+G++G++++ + N Q VAIK FE ++DA + E K I +
Sbjct: 17 RIGEGSFGVIFEGTNLLNNQQVAIK--FE--PRRSDAPQLRDEYRTYKLLAGCTGIPNV- 71
Query: 627 DIYKAVNNKDLYVVFEYM----ENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVM 682
Y +V + + E+ L+ R +K V + Q+ + IH ++
Sbjct: 72 -YYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAM--AAKQMLARVQSIHEKSLV 128
Query: 683 HRDLKPSNILIDKSCS-----IKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRR 737
+RD+KP N LI + S I + D G+ + D ++I YR + L R
Sbjct: 129 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK--QHIP---YREKKNLSGTAR 183
Query: 738 Y----TH-------HVDIWSLGCILAEML 755
Y TH D+ +LG + L
Sbjct: 184 YMSINTHLGREQSRRDDLEALGHVFMYFL 212
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 69.3 bits (170), Expect = 1e-12
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 33/209 (15%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
K G G +G + + +YVAIK E K+ A + + E F K I +
Sbjct: 16 KIGCGNFGELRLGKNLYTNEYVAIK--LE--PMKSRAPQLHLEYRFYKQLGSGDGIPQV- 70
Query: 627 DIYKAVNNKDLYVVFEYMENDLNKVIRDKI----LKDVHIRYIMFQLCNGLSYIHACKVM 682
Y K +V E + L + LK V + I QL + + Y+H+ ++
Sbjct: 71 -YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLM--IAIQLISRMEYVHSKNLI 127
Query: 683 HRDLKPSNILIDKSCS-----IKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRR 737
+RD+KP N LI + + I I D LA+ D + ++I YR + L R
Sbjct: 128 YRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK--KHIP---YREHKSLTGTAR 182
Query: 738 Y----TH-------HVDIWSLGCILAEML 755
Y TH D+ +LG + L
Sbjct: 183 YMSINTHLGKEQSRRDDLEALGHMFMYFL 211
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 70.9 bits (174), Expect = 2e-12
Identities = 52/268 (19%), Positives = 87/268 (32%), Gaps = 42/268 (15%)
Query: 31 RERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRADNESE 90
R+ + + L R M + K++ I +H R
Sbjct: 830 VVRKRYQCMRDATIALQALLRGYLVRNKY--QMMLREHKSIIIQKHVRGWLARV---HYH 884
Query: 91 TKKKAEVNLQVISDMH------EKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNIL 144
KA V LQ +KLK EA + R +K L E +++LQ +
Sbjct: 885 RTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGL-------ENKIMQLQRKI 937
Query: 145 ATLEMERDTLQQEVATLQAKISQERSS--------------KTQAVNLHKELEGRLQALN 190
E +L +++ L+ S E A N L+ + L
Sbjct: 938 DEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLR 997
Query: 191 TELER----NKHRELQLAEDNRHLGEKVSSLEKEC-RLQALNTELERNKHRELQLAEDNR 245
EL + K E + + VS L+++ L+ EL R H + + +
Sbjct: 998 KELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETM 1057
Query: 246 HLGEKVSSLEKECASLSLELKAAQAQYQ 273
L +E L L+L + +YQ
Sbjct: 1058 E-----KKLVEETKQLELDLNDERLRYQ 1080
Score = 66.3 bits (162), Expect = 5e-11
Identities = 44/265 (16%), Positives = 96/265 (36%), Gaps = 24/265 (9%)
Query: 263 LELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNG 322
++ A Q +R + K +M+ +E S+ I K ++ +A+ + K +
Sbjct: 836 QCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYL-- 893
Query: 323 KEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKT-LQSQVEQEQAKKFSLQ 381
Q R ++++ LK A + +K L++++ Q Q K
Sbjct: 894 ------------QCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQN 941
Query: 382 SDLSVQTSEAAHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLE 441
+ + +L+ + ++ E R EEE + + LQ+++
Sbjct: 942 KEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNR-------VLSLQEEIA 994
Query: 442 TEQYFSTLYKTQAHELKEELDERSRNILELEEERGDLTHRLQLAVARADS--EALARSIA 499
+ +T+ ++E D+ +L E + L+ + A+ I
Sbjct: 995 KLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEIT 1054
Query: 500 EETVGELEKEKTMKELELKDLMAKH 524
E +L +E EL+L D ++
Sbjct: 1055 ETMEKKLVEETKQLELDLNDERLRY 1079
Score = 65.1 bits (159), Expect = 1e-10
Identities = 43/307 (14%), Positives = 112/307 (36%), Gaps = 23/307 (7%)
Query: 263 LELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNG 322
+ ++ A Q+ VR H+ + + + A++ I K + + + R ++
Sbjct: 788 MRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQA 847
Query: 323 KEREVDYKKSIDQLMKDRED--LQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSL 380
R + ++++ + +Q+ + + L+ LQ + AK+
Sbjct: 848 LLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKR--E 905
Query: 381 QSDLSVQTSEAAHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQ----MKEL 436
L ++ K L +++ L+ +EY L K + ++ ++L
Sbjct: 906 LKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKL 965
Query: 437 Q---DQLETEQYFSTLYKTQAHELKEELDERSRNILELEEERGDLTHRLQLAVARADSEA 493
+ ++L + + + L+EE+ + + + + + E+ ++ + E
Sbjct: 966 RSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEK----KTIEEWADKYKHE- 1020
Query: 494 LARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLM 553
E+ V EL+++ T+ + E ++L + + E K+ L
Sbjct: 1021 -----TEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEET--KQLELDLN 1073
Query: 554 KDREDLQ 560
+R Q
Sbjct: 1074 DERLRYQ 1080
Score = 62.4 bits (152), Expect = 7e-10
Identities = 39/272 (14%), Positives = 84/272 (30%), Gaps = 22/272 (8%)
Query: 56 RETALRDEMGQLEKNLTILRHDLKESQRRADNESETKKKAEVNLQVISDMHEKLKTEAET 115
R +R + L+ L+ R + ++ + +Q + ++
Sbjct: 827 RMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQ------KHVRGWLAR 880
Query: 116 ATRLRKQSAELTVAKSAGEQMVVELQNILATLEMERDTLQQEVATLQAKISQERSSKTQA 175
R A + + M L + ++ L+ KI
Sbjct: 881 VHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKI---------- 930
Query: 176 VNLHKELEGRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKH 235
+L+ ++ N E + + L EK+ S + L+ E + +
Sbjct: 931 ----MQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVER--LRMSEEEAKNATN 984
Query: 236 RELQLAEDNRHLGEKVSSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASV 295
R L L E+ L +++ + E ++ + + +Q V +E KEE +
Sbjct: 985 RVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNR 1044
Query: 296 EIVKELKDLMAKHRSDLSSKESLLSNGKEREV 327
I + K++ L + L E
Sbjct: 1045 RIHDQAKEITETMEKKLVEETKQLELDLNDER 1076
Score = 61.7 bits (150), Expect = 1e-09
Identities = 48/323 (14%), Positives = 114/323 (35%), Gaps = 22/323 (6%)
Query: 143 ILATLEMERDTLQQEVAT-LQAKI------SQERSSKTQAVNLHKELEGRLQALNTELER 195
+A LE R + +Q I + + A+ + + + G R
Sbjct: 755 QVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLR 814
Query: 196 NKH---------RELQLAEDNRHLGEKVSSLEKECR--LQALNTELERNKHRELQLAEDN 244
R + + + + + +L+ R L ++ +H+ + + +
Sbjct: 815 RTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHV 874
Query: 245 RHLGEKVSSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDL 304
R +V A + L+ + ++E++ + + + ++ + + ++ L
Sbjct: 875 RGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKK-LKIEARSVERYKKLHIGLENKIMQL 933
Query: 305 MAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKS- 363
K +SLL E+ Y ++L D E L+ K L++
Sbjct: 934 QRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEI 993
Query: 364 KTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAR-EEQLSHEVAMLREAKRNIEEEYHKL 422
L+ ++ Q Q +K +++ E L + +EQ + E R I ++ ++
Sbjct: 994 AKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEI 1053
Query: 423 -KTKRSVEDLQMKELQDQLETEQ 444
+T + K+L+ L E+
Sbjct: 1054 TETMEKKLVEETKQLELDLNDER 1076
Score = 59.4 bits (144), Expect = 7e-09
Identities = 41/251 (16%), Positives = 87/251 (34%), Gaps = 17/251 (6%)
Query: 106 HEKLKTEAETA-TRLRKQSAELTVAKSAGEQMVVELQNILATLEMERDTLQQEVATLQAK 164
++ ++ LR E + +Q + + A + +
Sbjct: 835 YQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQ 894
Query: 165 IS-QERSSKTQAVNLHKELE--GRLQALNTELERNKHRELQ-----LAEDNRHLGEKVSS 216
+ +K + L E R + L+ LE NK +LQ ++ + L EK+++
Sbjct: 895 CCYRRMMAKRELKKLKIEARSVERYKKLHIGLE-NKIMQLQRKIDEQNKEYKSLLEKMNN 953
Query: 217 LEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLELKAAQAQY---Q 273
LE +L + R E+ ++ +V SL++E A L EL Q + +
Sbjct: 954 LEIT--YSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIE 1011
Query: 274 QEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSI 333
+ ++ + + +E + + E ++L + + E K+
Sbjct: 1012 EWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEET--KQLE 1069
Query: 334 DQLMKDREDLQ 344
L +R Q
Sbjct: 1070 LDLNDERLRYQ 1080
Score = 56.7 bits (137), Expect = 4e-08
Identities = 29/184 (15%), Positives = 74/184 (40%), Gaps = 10/184 (5%)
Query: 917 ELELKDLMAKHRSDLSSKESLLSNGKEREVDYKK----SIDQLMKDREDLQQQINLLKEE 972
L ++ + + +RE+ K S+++ K L+ +I L+ +
Sbjct: 877 WLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRK 936
Query: 973 LRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKKE 1032
+ + + +E + L +++ ++ + KL + R ++ + ++K ++ V +
Sbjct: 937 IDEQN---KEYKSLLEKMNNLEITYSTETEKLRSDVERLRMS---EEEAKNATNRVLSLQ 990
Query: 1033 KECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQ 1092
+E KL++EL Q + + + K E + V E L+ E + + I
Sbjct: 991 EEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQA 1050
Query: 1093 GKLA 1096
++
Sbjct: 1051 KEIT 1054
Score = 55.5 bits (134), Expect = 1e-07
Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 17/170 (10%)
Query: 911 KQNTDPELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLK 970
K + E ++ L K +SLL E+ Y ++L D E L+ K
Sbjct: 921 KLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAK 980
Query: 971 EELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRK 1030
+ + EE+ KL K+L Q Q + E ++ + +
Sbjct: 981 NATNRVLSLQEEIAKLRKELHQTQ----TEKKTIEEWADKYK-------------HETEQ 1023
Query: 1031 KEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQME 1080
E ++ L E+E+ N+ + KE+ E + + E T +L+L +
Sbjct: 1024 LVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLN 1073
Score = 39.3 bits (92), Expect = 0.010
Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 17/189 (8%)
Query: 808 QKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASLSSADVENDESY 867
++EL++L+ E S + + +++I QLQ K+ E SL + +Y
Sbjct: 903 KRELKKLK----IEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITY 958
Query: 868 VQ-DSRLEGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPELELKDLMAK 926
+L V + + + + + ++ K+ + E K +
Sbjct: 959 STETEKLRSDVERLRMSEEEAKNATNRVLSLQEE-----IAKLRKELHQTQTEKKTIEEW 1013
Query: 927 HRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKL 986
E L+S + K+ L ++E+L ++I+ +E+ ++ E
Sbjct: 1014 ADKYKHETEQLVS-------ELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETK 1066
Query: 987 HKQLKQEQL 995
+L
Sbjct: 1067 QLELDLNDE 1075
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 69.2 bits (169), Expect = 2e-12
Identities = 61/288 (21%), Positives = 110/288 (38%), Gaps = 31/288 (10%)
Query: 492 EALARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQ 551
EA A I + K +KE L S+ +L + + ++
Sbjct: 40 EADAFGIDKTATCRTVAVKMLKE----GATHSEHRALMSELKILI-----HIGHHLNVVN 90
Query: 552 LMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREIL 611
L+ + ++ E +G + ++V K FR D Y +
Sbjct: 91 LLGACTKPGGPLMVIVEF-CKFGNLSTYLRSKRNEFVPYKTKGARFRQGKD----YVGAI 145
Query: 612 FLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCN 671
+ +R + IT + + + + E + + + L H+ FQ+
Sbjct: 146 PVDLKRRL-DSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAK 204
Query: 672 GLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIAT-------R 724
G+ ++ + K +HRDL NIL+ + +KI D GLAR + +Y+ +
Sbjct: 205 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP----DYVRKGDARLPLK 260
Query: 725 WYRAPEILISNRRYTHHVDIWSLGCILAEM--LQSKPLFPGASTSHQL 770
W APE + +R YT D+WS G +L E+ L + P +PG +
Sbjct: 261 WM-APETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEF 305
Score = 59.2 bits (143), Expect = 3e-09
Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 14/186 (7%)
Query: 555 DREDLQQQINLLKE-GKGAYGIVYKAY----DKNNKQYVAIKKIFEAFRNKTDAQRTYRE 609
R+ L+ L K G+GA+G V +A DK K+ + ++ + E
Sbjct: 20 PRDRLK----LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 75
Query: 610 ILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMEN-DLNKVIRDKILKDVHIRYIMFQ 668
+ L H N++ +L L V+ E+ + +L+ +R K + V + +
Sbjct: 76 LKILIHIGHHLNVVNLLGACTKPGGP-LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGAR 134
Query: 669 LCNGLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRA 728
G Y+ A DLK I S S +SLSD +E + +
Sbjct: 135 FRQGKDYVGAI---PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 191
Query: 729 PEILIS 734
E LI
Sbjct: 192 LEHLIC 197
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 67.3 bits (164), Expect = 1e-11
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 567 KEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITML 626
K G G++G +Y + + VAIK E KT + E + Q I +
Sbjct: 14 KIGSGSFGEIYLGTNIQTNEEVAIK--LE--NVKTKHPQLLYESKIYRILQGGTGIPNV- 68
Query: 627 DIYKAVNNKDLYVVFEYM----ENDLNKVIRDKILKDVHIRYIMFQLCNGLSYIHACKVM 682
+ V +V + + E+ N R LK V + + Q+ N + ++H+ +
Sbjct: 69 -RWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLM--LADQMINRVEFVHSKSFL 125
Query: 683 HRDLKPSNILI---DKSCSIKIGDLGLARSLSDSKECLTEYIATRWYRAPEILISNRRY- 738
HRD+KP N L+ ++ + I D GLA+ D+ ++I YR + L RY
Sbjct: 126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH--QHIP---YRENKNLTGTARYA 180
Query: 739 ---TH-------HVDIWSLGCILAEML 755
TH D+ SLG +L L
Sbjct: 181 SVNTHLGIEQSRRDDLESLGYVLMYFL 207
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 60.1 bits (146), Expect = 2e-09
Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 28/168 (16%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKI-FEAFRNKTDAQRTYREILFLKSFQRHPNIITMLD 627
G G +G++Y A+ N + A + E + + E+ F + + I ++
Sbjct: 46 GSGGFGLIYLAFPTNKPEKDARHVVKVE----YQENGPLFSELKFYQRVAKKDCIKKWIE 101
Query: 628 IYK---------------AVNNKDLYV-VFEYMENDLNKVIRDK---ILKDVHIRYIMFQ 668
+ + V E + DL K+ V + +
Sbjct: 102 RKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQ--LGIR 159
Query: 669 LCNGLSYIHACKVMHRDLKPSNILID--KSCSIKIGDLGLARSLSDSK 714
+ + L YIH + +H D+K +N+L+ + + D GL+ +
Sbjct: 160 MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNG 207
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 57.8 bits (140), Expect = 1e-08
Identities = 25/177 (14%), Positives = 59/177 (33%), Gaps = 41/177 (23%)
Query: 569 GKGAYGIVYKAYDKN--------NKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHP 620
+ GI+Y+A + KQ ++K +A R + E F + +
Sbjct: 51 TRDNQGILYEAAPTSTLTCDSGPQKQKFSLK--LDA-----KDGRLFNEQNFFQRAAKPL 103
Query: 621 NIITMLDIYKAVNNKDL-----------------YVVFEYMENDLNKVIRDKILKDVHIR 663
++ +K + + L ++V + L + + R
Sbjct: 104 ----QVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSER 159
Query: 664 ---YIMFQLCNGLSYIHACKVMHRDLKPSNILI--DKSCSIKIGDLGLARSLSDSKE 715
+ +L + L ++H + +H ++ NI + + + + G A S +
Sbjct: 160 SVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK 216
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 57.9 bits (140), Expect = 1e-08
Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 25/168 (14%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILFLKSFQRHPNIITMLDI 628
G+G +G +Y A +++ V +D + E+ F + + I +
Sbjct: 44 GQGGFGCIYLADMNSSES-VGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 629 YK---------------AVNNKDLYV-VFEYMENDLNKVIRDKI----LKDVHIRYIMFQ 668
K N K + + +DL K+ K V + +
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQ--LSLR 160
Query: 669 LCNGLSYIHACKVMHRDLKPSNILID--KSCSIKIGDLGLARSLSDSK 714
+ + L YIH + +H D+K SN+L++ + + D GLA
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEG 208
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM,
protein engineering, structural protein; HET: ADP; 2.80A
{Dictyostelium discoideum} SCOP: k.1.1.1
Length = 1010
Score = 57.0 bits (138), Expect = 4e-08
Identities = 35/261 (13%), Positives = 82/261 (31%), Gaps = 1/261 (0%)
Query: 143 ILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQ 202
LA +E R+ T + + + LE R + E ++ +
Sbjct: 750 QLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHK 809
Query: 203 LAEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLS 262
+ + E E +L T+L K RE +A E S+ +
Sbjct: 810 EYKKTEKPPKGQEVSELEAIYNSLQTKLRLIK-REPFVAPAGLTPNEIDSTWSALEKAEQ 868
Query: 263 LELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNG 322
+A + + +++ + QK + K+ + K + + +++ ++ L N
Sbjct: 869 EHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNL 928
Query: 323 KEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQS 382
+ + + + Q D + Q+ L K Q ++ + ++
Sbjct: 929 EAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKN 988
Query: 383 DLSVQTSEAAHLKAREEQLSH 403
L + ++ H
Sbjct: 989 TLLAELERLQKIEDLHHHHHH 1009
Score = 47.4 bits (113), Expect = 4e-05
Identities = 33/264 (12%), Positives = 73/264 (27%), Gaps = 37/264 (14%)
Query: 263 LELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNG 322
+ K A + + + E Q + KE K + S+ + N
Sbjct: 782 INDKQASLESRDFGDSIESVQSF---------MNAHKEYKKTEKPPKGQEVSELEAIYNS 832
Query: 323 KEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQS 382
+ ++ K + + + + QE ++ ++ + +++ A
Sbjct: 833 LQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIA------- 885
Query: 383 DLSVQTSEAAHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLET 442
+ +Q K + V + + D + + L+ Q +
Sbjct: 886 -VLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNS 944
Query: 443 EQYFSTLYKTQAHELKEELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEET 502
+ L + + + EL E + A +S AE
Sbjct: 945 DL---------LSILAQLTELNYNGVPELTERKDTF---------FAQQWTGVKSSAETY 986
Query: 503 VGEL--EKEKTMKELELKDLMAKH 524
L E E+ K +L H
Sbjct: 987 KNTLLAELERLQKIEDLHHHHHHH 1010
Score = 45.0 bits (107), Expect = 1e-04
Identities = 27/229 (11%), Positives = 71/229 (31%), Gaps = 17/229 (7%)
Query: 31 RERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRADNESE 90
R +E Q ++ E + E+ +LE L+ L+ +R
Sbjct: 790 ESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPA 849
Query: 91 TKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQN--ILATLE 148
E++ S + + + AE K+ ++ V +++ +L+N ++
Sbjct: 850 GLTPNEID-STWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVY 908
Query: 149 MERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAEDNR 208
+ + + +QAK+ + + +L + L ++ +L + + + +
Sbjct: 909 LGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERK 968
Query: 209 HLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKE 257
+ K E++ +E
Sbjct: 969 D--------------TFFAQQWTGVKSSAETYKNTLLAELERLQKIEDL 1003
Score = 39.3 bits (92), Expect = 0.010
Identities = 26/185 (14%), Positives = 68/185 (36%), Gaps = 24/185 (12%)
Query: 925 AKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEME 984
+ + L +E ++ + + L K ++ + + + + +K + ++
Sbjct: 833 LQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYN 892
Query: 985 KLHKQLKQEQLLKAQA----------VNKLAEIMNRKDINTTCKGKSKASSADVRKKEKE 1034
++ K+L+ K+ A++ N + + C+ S++D+ +
Sbjct: 893 RILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQ 952
Query: 1035 CRKLQQ----ELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQ 1090
+L ELT+ ++ F ++ ++S K L EL+ + +IE
Sbjct: 953 LTELNYNGVPELTERKDTFF------AQQWTGVKSSAETY---KNTLLAELE-RLQKIED 1002
Query: 1091 LQGKL 1095
L
Sbjct: 1003 LHHHH 1007
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 55.7 bits (133), Expect = 8e-08
Identities = 66/543 (12%), Positives = 175/543 (32%), Gaps = 55/543 (10%)
Query: 32 ERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRADNESET 91
R + ++ Q++L + + + E QLE N L+ L+ S R A SE
Sbjct: 275 NRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEG 334
Query: 92 KKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNILATLEMER 151
K +++N + + E L + L E+ + + + +
Sbjct: 335 KMVSDIN----NAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKE 390
Query: 152 DTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAEDNRHLG 211
LQQ+ + K H+ E L A +E+ +L E + +
Sbjct: 391 AMLQQKDYETATLSEIKALLKK-----HEAFESDLAAHQDRVEQIAAIAQELNELDYYDS 445
Query: 212 EKVSSLEKE--CRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLELKAAQ 269
V++ ++ + L ++ + + + + + K A + ++ A
Sbjct: 446 PSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAM 505
Query: 270 AQYQQEVRAHE--------------ETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSK 315
Q H + + +A + I E+ ++ + +++
Sbjct: 506 EDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGT 565
Query: 316 ESLLSNGKEREVDYKKSIDQLMKDR-EDLQQQINLLKEGAELRQEL------------EK 362
+ + + + QL+ R + L ++ ++ LR++ K
Sbjct: 566 NPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTK 625
Query: 363 SKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAMLREAK----RNIEEE 418
+ + + + L + K + +QL + ++EA ++
Sbjct: 626 MEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYT 685
Query: 419 YHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHELKE------ELDERSRNILELE 472
++ + +++E + ++ E D + +++ E
Sbjct: 686 MEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCE 745
Query: 473 EERGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSKE 532
+ R L + + A+ + + +G + + + D M++ +D + +
Sbjct: 746 DFRACLI-SMGYNMGEAEFARIMSIVDPNRMGVVTFQAFI------DFMSRETADTDTAD 798
Query: 533 SLL 535
++
Sbjct: 799 QVM 801
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET:
MSE; 2.33A {Homo sapiens}
Length = 168
Score = 50.9 bits (121), Expect = 2e-07
Identities = 34/145 (23%), Positives = 69/145 (47%)
Query: 102 ISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNILATLEMERDTLQQEVATL 161
+ + ++ L+TE++TA RLRK E++ + S E + ELQ LE + ++ L
Sbjct: 15 LEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQL 74
Query: 162 QAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKEC 221
QA + ER + + +L+ R+ +L E++ KH ++ + + + ++ EKE
Sbjct: 75 QAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEK 134
Query: 222 RLQALNTELERNKHRELQLAEDNRH 246
++ + ++ E N H
Sbjct: 135 NNLEIDLNYKLKSLQQRLEQEVNEH 159
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 53.9 bits (129), Expect = 3e-07
Identities = 84/607 (13%), Positives = 164/607 (27%), Gaps = 240/607 (39%)
Query: 311 DLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKS------- 363
+ ++ L+ + + Y + L+ + + Q +L E E
Sbjct: 53 EPTTPAELVG----KFLGY---VSSLV-EPSKVGQFDQVLNL---CLTEFENCYLEGNDI 101
Query: 364 ----KTLQSQVEQEQAKKFSLQSDLSVQT-SEAAHLKAREEQLSHEVAMLREAKR----- 413
L + + K L ++ A + R A+ R
Sbjct: 102 HALAAKLLQENDTTLVKTKEL-----IKNYITARIMAKRPFDKKSNSALFRAVGEGNAQL 156
Query: 414 --------NIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHELKEE----L 461
N ++ Y +EL+D +T Y +L + L
Sbjct: 157 VAIFGGQGNTDD-Y-------------FEELRDLYQT-------YHVLVGDLIKFSAETL 195
Query: 462 DERSRNILELEE--ERG-DLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKELELK 518
E R L+ E+ +G ++ L+ D + L SI + + + +
Sbjct: 196 SELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLL-SIP---I-------SCPLIGVI 244
Query: 519 DLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQIN-LLKEGKGAYGIVY 577
L Y + L +L+ + +G +
Sbjct: 245 QL----------------------AHYVVTAKLLGFTPGELRSYLKGATGHSQG----LV 278
Query: 578 KAYDKNNKQYVAIKKIFEAFRNKTDAQRTYREILF---LKSFQRHPNIIT---------- 624
A +A +E+F + R +LF ++ ++ +PN
Sbjct: 279 TA------VAIAETDSWESF---FVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLE 329
Query: 625 --------MLDIYKAVNNKDLYVVFEYMENDLNKVIRDKILKDVHI-------RYI---- 665
ML +++N V +Y+ N + K V I +
Sbjct: 330 NNEGVPSPML----SISNLTQEQVQDYVN-KTNSHLPAG--KQVEISLVNGAKNLVVSGP 382
Query: 666 ---MFQLCNGLSYIHA------CKVMHRDLKP--------------SNILID-------- 694
++ L L A ++ + K S++L+
Sbjct: 383 PQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKD 442
Query: 695 ---KSCSIKIGDLGLA----------RSLSDS-KECLTEYIAT---RWYRAPEILISNRR 737
+ S D+ + R LS S E + + I +W + +
Sbjct: 443 LVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQF-----K 497
Query: 738 YTHHVDIWSLGCILAEMLQSKPLFPGAS------TSHQLQ------LIVNLVRPNPPHAD 785
TH +D G PG + T ++ + NP D
Sbjct: 498 ATHILD---FG-------------PGGASGLGVLTHRNKDGTGVRVIVAGTLDINP--DD 539
Query: 786 KFYAGFK 792
+ GFK
Sbjct: 540 DY--GFK 544
Score = 52.7 bits (126), Expect = 7e-07
Identities = 52/376 (13%), Positives = 99/376 (26%), Gaps = 129/376 (34%)
Query: 18 GGQANGELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHD 77
GGQ N + EE L + Y+ L + L D
Sbjct: 161 GGQGNTD------------DYFEE----LRDLYQTYHVLVGDLIKFSAETLSELIRTTLD 204
Query: 78 --------------LKESQRRADNE---SETKKKAEVNLQVI--------------SDM- 105
L+ D + S ++ +I
Sbjct: 205 AEKVFTQGLNILEWLENPSNTPDKDYLLS-----IPISCPLIGVIQLAHYVVTAKLLGFT 259
Query: 106 HEKLKTEAETATRLRKQ--SAELTVAKSAGEQMVVELQNILATLEMERDTL-------QQ 156
+L++ + AT + +A + E ++ + + L +
Sbjct: 260 PGELRSYLKGATGHSQGLVTAVAIAETDSWESF---FVSVRKAITV----LFFIGVRCYE 312
Query: 157 E--VATLQAKISQERSSKTQ-------AV-NL-HKELEGRLQALNTELERNKHRELQLAE 205
+L I ++ + ++ NL ++++ + N+ L K E+ L
Sbjct: 313 AYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLV- 371
Query: 206 DN--RHL---GEKVSSLEKECRLQALNTELERNK-----------HRELQLAEDNR---- 245
N ++L G S L LN L + K E +L NR
Sbjct: 372 -NGAKNLVVSGPPQS-------LYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPV 423
Query: 246 ----H---LGEKVSSLEKECASLSLELKAAQAQ---YQQEVRAHEETQKSRMVNKEEASV 295
H L + K+ ++ A Q Y + S
Sbjct: 424 ASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVY------DTFDGS----DLRVLSG 473
Query: 296 EIVKELKDLMAKHRSD 311
I + + D + +
Sbjct: 474 SISERIVDCIIRLPVK 489
Score = 52.7 bits (126), Expect = 9e-07
Identities = 97/618 (15%), Positives = 170/618 (27%), Gaps = 209/618 (33%)
Query: 379 SLQSDLSVQTSEAAHLKAREEQLSHE-VAMLREAKRNI--EEEYHKLKTKRSVEDLQMKE 435
SL+ L V T+ + A QL + +L E ++E + +L K
Sbjct: 15 SLEHVLLVPTA--SFFIA--SQLQEQFNKILPEPTEGFAADDE------PTTPAELVGKF 64
Query: 436 LQ---DQLETEQYFSTLYKTQAHE-LKEELDERSRNILELEEERGDLTHRLQLAVARADS 491
L +E + Q + L L E L G+ H
Sbjct: 65 LGYVSSLVEPSK------VGQFDQVLNLCLTEFENCYL-----EGNDIH----------- 102
Query: 492 EALARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSKES-LLSNGKEREV------- 543
ALA + +E L K K + + + + R S L E
Sbjct: 103 -ALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFG 161
Query: 544 ------DYKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYV--AIKKIFE 595
DY ++L R+ +Y+ Y + + + + E
Sbjct: 162 GQGNTDDY---FEEL---RD------------------LYQTYHVLVGDLIKFSAETLSE 197
Query: 596 AFRNKTDAQRTYREILFLKSFQRHPNIITMLDIYKAVNNKDLYVVFEYMENDLNKVIRDK 655
R DA++ + + L + + +P+ D +Y+
Sbjct: 198 LIRTTLDAEKVFTQGLNILEWLENPS--NTPDK-------------DYL----------- 231
Query: 656 ILKDVHIRY----I-MFQLCNGLSYIHACKVMHRDLKPSNIL-IDKSCSIKIGDL--GLA 707
+ I I + QL + Y+ K++ P + K + L +A
Sbjct: 232 ----LSIPISCPLIGVIQLAH---YVVTAKLL--GFTPGELRSYLKGATGHSQGLVTAVA 282
Query: 708 RSLSDSKECLTE----------YIATRWYRA-PEILISNRRYTHHVDIWSLGC-ILAEML 755
+ +DS E +I R Y A P + D + + ML
Sbjct: 283 IAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILE---DSLENNEGVPSPML 339
Query: 756 QSKPLFPGASTSHQLQLIVNLVRPNPPHADKFYAGFKSKHEREKFN---QVVVKC--QKE 810
L T Q+Q VN + P + N +VV +
Sbjct: 340 SISNL-----TQEQVQDYVNKTNSHLPAGKQVEISL--------VNGAKNLVV-SGPPQS 385
Query: 811 LQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLA--------------ALGSETASL 856
L L + K K LD S I + KL L + L
Sbjct: 386 LYGLNLTL-----RKAKAPSGLDQ--SRIPFSERKLKFSNRFLPVASPFHSHLLVPASDL 438
Query: 857 SSADVENDESYVQDSRLEGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSEN--DKQNT 914
+ D+ + + IP V Y++ + D +
Sbjct: 439 INKDLVKNNVSFNAKDI----QIP--------------V---------YDTFDGSDLRVL 471
Query: 915 DPEL--ELKDLMAKHRSD 930
+ + D + +
Sbjct: 472 SGSISERIVDCIIRLPVK 489
Score = 47.4 bits (112), Expect = 4e-05
Identities = 40/267 (14%), Positives = 84/267 (31%), Gaps = 86/267 (32%)
Query: 400 QLSHEVAM---LR-----------EAKRNIEEEYHKLKTKRSVEDL---QMKEL------ 436
Q S E M L A + ++ Y S+ D+ L
Sbjct: 1624 QGSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTY-----GFSILDIVINNPVNLTIHFGG 1678
Query: 437 -QDQLETEQYFSTLYKT------QAHELKEELDERSRN-ILELEEERGDLTHRLQLAVAR 488
+ + E Y + +++T + ++ +E++E S + E+ T Q A+
Sbjct: 1679 EKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALT- 1737
Query: 489 ADSEALARSIAEETVGELEKEKTMK-----E----------LELKDLMA--KHRSDLSSK 531
+A + + G + + T E + ++ L+ +R
Sbjct: 1738 LMEKAAFEDLKSK--GLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTM-- 1793
Query: 532 ESLLSNGKEREVDYK------KSIDQLMKDREDLQQQINLLKEGKGAYGIVYKA-YDKNN 584
+ + + +Y + +E LQ + + + G +V Y+ N
Sbjct: 1794 QVAVPRDELGRSNYGMIAINPGRVAASF-SQEALQYVVERVGKRTG--WLVEIVNYNVEN 1850
Query: 585 KQYVA------------------IKKI 593
+QYVA ++KI
Sbjct: 1851 QQYVAAGDLRALDTVTNVLNFIKLQKI 1877
Score = 42.0 bits (98), Expect = 0.001
Identities = 70/485 (14%), Positives = 135/485 (27%), Gaps = 177/485 (36%)
Query: 594 FEAFRNKTDAQRTYREIL--FLKSFQRHPNIITMLDIYKAVNNKDLY-VVFEYMENDLNK 650
+ + + + ++L L F+ L D++ + + ++ +
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEFEN-----CYL------EGNDIHALAAKLLQENDTT 115
Query: 651 VIRDKILKDVHIRYIMFQLCNGLSYIHACKVMHR--DLKPSNILIDKSCSIKIGDLGLA- 707
+++ K L I+ +YI A + R D K ++ L ++ G+ L
Sbjct: 116 LVKTKEL----IK----------NYITARIMAKRPFDKKSNSALFR---AVGEGNAQLVA 158
Query: 708 ---------------RSL-SDSKECLTEYIATRWYRAPEILIS--------NRRYTHHVD 743
R L + + I + E L + +T ++
Sbjct: 159 IFGGQGNTDDYFEELRDLYQTYHVLVGDLIK----FSAETLSELIRTTLDAEKVFTQGLN 214
Query: 744 I--WSLGCIL--------AEMLQSKPL-FPG---------ASTSHQLQLIVNLVRPNPPH 783
I W L + L S P+ P T+ L P
Sbjct: 215 ILEW-----LENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGF-------TPGE 262
Query: 784 ADKFYAGFKSKHER--------------EKFNQVVVK-----------CQKE--LQELQS 816
+ G + H + E F V K C + L
Sbjct: 263 LRSYLKGA-TGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPP 321
Query: 817 QVVE---ENTSKLKLQMELDSKDSEIEQLQGKLAAL-----GSETASLSSADVEN-DESY 867
++E EN + M L + EQ+Q + + +S + N ++
Sbjct: 322 SILEDSLENNEGVPSPM-LSISNLTQEQVQDYVNKTNSHLPAGKQVEIS---LVNGAKNL 377
Query: 868 V-----QDSRLEGWVSIPNKQNIKRHGWKKQY-VVVSSKKIIFYN-----SENDKQNTDP 916
V Q L G + K Q + S +K+ F N + P
Sbjct: 378 VVSGPPQS--LYGLNL--TLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVAS-------P 426
Query: 917 ELELKDLMAKHRSDL--SSKESLLSNGKEREVDYKKSIDQLM------KDREDLQQQINL 968
H S L + + + + + V + + D DL+
Sbjct: 427 F---------H-SHLLVPASDLINKDLVKNNVSFNAK--DIQIPVYDTFDGSDLRVLSGS 474
Query: 969 LKEEL 973
+ E +
Sbjct: 475 ISERI 479
Score = 40.8 bits (95), Expect = 0.003
Identities = 52/269 (19%), Positives = 87/269 (32%), Gaps = 102/269 (37%)
Query: 773 IVNLVRPNPPHADKFYAGFKSKHEREKF-----------NQVVVKCQKELQELQSQVV-E 820
I+++V NP + + G K K RE + K KE+ E +
Sbjct: 1661 ILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFR 1720
Query: 821 ENTSKLKL----Q--MELDSKDSEIEQLQ----------------GKLAALGSETASLSS 858
L Q + L K + E L+ G+ AAL S +S
Sbjct: 1721 SEKGLLSATQFTQPALTLMEK-AAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSI 1779
Query: 859 AD---------------VENDE----SY----VQDSR---------LEGWVSIPNKQNIK 886
V DE +Y + R L+ V ++ K
Sbjct: 1780 ESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVV----ERVGK 1835
Query: 887 RHGWKKQYVVVSSKKIIFYNSENDKQNTDPELELKDLMAKHRSDLSSKESLLSNGKEREV 946
R GW +V I+ YN EN +Q + A L + ++L+ K +++
Sbjct: 1836 RTGW-----LVE---IVNYNVEN-QQY---------VAAGDLRALDTVTNVLNFIKLQKI 1877
Query: 947 DYKKSIDQLMKDREDLQQQINL--LKEEL 973
D + LQ+ ++L ++ L
Sbjct: 1878 DIIE-----------LQKSLSLEEVEGHL 1895
Score = 37.0 bits (85), Expect = 0.047
Identities = 47/284 (16%), Positives = 91/284 (32%), Gaps = 100/284 (35%)
Query: 18 GGQANG---EL-------KDLLER------ERREMSQLE---------------ERQRQL 46
G Q G +L +D+ R + S L+ E+ +++
Sbjct: 1625 GSQEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRI 1684
Query: 47 SEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRADNE--SETKKKAEVNLQ---- 100
E Y A+ D + EK + R++ S T+ Q
Sbjct: 1685 RENYSAMIFETIV--DGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQ-----FTQPALT 1737
Query: 101 VIS-----DMHEK-------------------LKTEA-----ETATRL---RKQSAELTV 128
++ D+ K L + A E+ + R + ++ V
Sbjct: 1738 LMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAV 1797
Query: 129 AKSAGEQ----MV-VELQNILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKE-- 181
+ + M+ + + A+ E LQ V ++ + + VN + E
Sbjct: 1798 PRDELGRSNYGMIAINPGRVAASFSQE--ALQYVVE----RVGKRTGWLVEIVNYNVENQ 1851
Query: 182 ---LEGRLQALNT---ELERNKHRELQLAEDNRHLGEKVSSLEK 219
G L+AL+T L K +++ + E L + + SLE+
Sbjct: 1852 QYVAAGDLRALDTVTNVLNFIKLQKIDIIE----LQKSL-SLEE 1890
Score = 35.8 bits (82), Expect = 0.11
Identities = 89/541 (16%), Positives = 150/541 (27%), Gaps = 192/541 (35%)
Query: 704 LG-LARSLSDSKECLTEYIATRWYRAPEILISNRRYTHHVDIWSLGCILAEMLQSKPLFP 762
LG ++ + SK + + E Y DI +L A++LQ
Sbjct: 65 LGYVSSLVEPSKVGQFDQVLNLCLTEFE-----NCYLEGNDIHAL---AAKLLQEND--- 113
Query: 763 GASTSHQLQLIVN-------LVRP-NPPHADKFYAGFKSKHEREK-----FN-Q-VVVKC 807
+ +LI N RP + F++ E F Q
Sbjct: 114 -TTLVKTKELIKNYITARIMAKRPFDKKSNSAL---FRAVGEGNAQLVAIFGGQGNTDDY 169
Query: 808 QKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASLSSADVENDESY 867
+EL++L T + + +L I+ L+ L ++ ++ +
Sbjct: 170 FEELRDLY------QTYHVLVG-DL------IKFSAETLS-------ELIRTTLDAEKVF 209
Query: 868 VQDSRLEGWVSIPNKQNIKRHGWKKQYVVVS--SKKIIF------YNSENDKQNTDPELE 919
Q + W+ P+ K Y++ S +I Y P E
Sbjct: 210 TQGLNILEWLENPS----NTPD--KDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPG-E 262
Query: 920 LKDLMA---KHRSDL---------SSKESLLSNGKEREVDYKKSIDQLMKDREDL----- 962
L+ + H L S ES + +K+I L
Sbjct: 263 LRSYLKGATGHSQGLVTAVAIAETDSWESFFVS-------VRKAI-------TVLFFIGV 308
Query: 963 --QQ---QINLLKEELRKSSNSSEE----MEKLH-KQLKQEQLLKA-QAVNK-LAEIMNR 1010
+ +L L S ++E M L L QEQ+ N L +
Sbjct: 309 RCYEAYPNTSLPPSILEDSLENNEGVPSPM--LSISNLTQEQVQDYVNKTNSHLPA--GK 364
Query: 1011 KD----INTT----CKG-------------KSKASSA-DVRKKEKECRK----------- 1037
+ +N G K+KA S D + RK
Sbjct: 365 QVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVA 424
Query: 1038 --------------LQQELTQEREKFN----QVVVKC---QKELQELQSQVVE------- 1069
+ ++L + FN Q+ V +L+ L + E
Sbjct: 425 SPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCII 484
Query: 1070 ------ENTSKLKLQMELD---SKDSEIEQL-----QGKLAALGSETASLSSADVENDES 1115
E T++ K LD S + L G G + D+ D+
Sbjct: 485 RLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGT----GVRVIVAGTLDINPDDD 540
Query: 1116 Y 1116
Y
Sbjct: 541 Y 541
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor,
microtubles, motor protein; HET: ADP SPM; 2.81A
{Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C*
Length = 3245
Score = 51.1 bits (122), Expect = 2e-06
Identities = 24/155 (15%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 955 LMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQL--KQEQLLKAQ--AVNKLAEIMNR 1010
+ + R+ L+++ L L+K ++ +++ L L K +L A KL +++
Sbjct: 1908 INEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQD 1967
Query: 1011 KDINTTCKGKSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEE 1070
+ + ++ + + KE + + + EK ++E+++L++ E
Sbjct: 1968 QQAAEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEPTGPL-REEVEQLENAANEL 2026
Query: 1071 NTSKLKLQMELDSKDSEIEQLQGKLAALGSETASL 1105
+ ++ + + + I + + A L ET +
Sbjct: 2027 KLKQDEIVATITALEKSIATYKEEYATLIRETEQI 2061
Score = 38.3 bits (89), Expect = 0.019
Identities = 22/173 (12%), Positives = 62/173 (35%), Gaps = 16/173 (9%)
Query: 921 KDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSNS- 979
L+ + R L ++ L+ G ++ D + + L +++++ E+ +
Sbjct: 1905 VLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQM 1964
Query: 980 SEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKKEKECRKLQ 1039
++ + + K + L+ Q + EI +K + +E +L+
Sbjct: 1965 VQDQQAAEIKQKDARELQVQLDVRNKEIAVQKVK---AYADL-EKAEPTGPLREEVEQLE 2020
Query: 1040 QELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQ 1092
+ + K +++ + L+ + + E + E EQ++
Sbjct: 2021 NAANELKLKQDEI----VATITALEKSI-------ATYKEEYATLIRETEQIK 2062
Score = 31.0 bits (70), Expect = 3.7
Identities = 40/239 (16%), Positives = 80/239 (33%), Gaps = 54/239 (22%)
Query: 336 LMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLK 395
+ + R+ L+++ L G L+K + ++QV+ LQ L+ + E
Sbjct: 1908 INEKRDQLEEEQLHLNIG------LKKLRDTEAQVKD-------LQVSLAQKNRE----- 1949
Query: 396 AREEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAH 455
L + Q+ +Q + + + A
Sbjct: 1950 ------------LDVKNEQAN------------------QKLKQMVQDQQAAEIKQKDAR 1979
Query: 456 ELKEELDERSRNILELEEE-RGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKE 514
EL+ +LD R++ I + + DL R + E L + E + + E T+
Sbjct: 1980 ELQVQLDVRNKEIAVQKVKAYADLEKAEPTGPLREEVEQLENAANELKLKQDEIVATITA 2039
Query: 515 LE--LKDLMAKHRSDLSSKESL---LSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 568
LE + ++ + + E + S K + +D L +R +QQ
Sbjct: 2040 LEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNT 2098
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos
taurus} SCOP: h.1.27.1
Length = 71
Score = 43.7 bits (102), Expect = 9e-06
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 950 KSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKL----HKQLKQEQLLKAQAVNKLA 1005
+ L ++E+L ++ +E+L + + + KQL E+ LK QAVNKLA
Sbjct: 4 SDVANLANEKEELNNKLKEAQEQLSRLKDEEISAAAIKAQFEKQLLTERTLKTQAVNKLA 63
Query: 1006 EIMNRKD 1012
EIMNRK+
Sbjct: 64 EIMNRKE 70
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A
{Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Length = 995
Score = 48.9 bits (117), Expect = 1e-05
Identities = 24/189 (12%), Positives = 65/189 (34%), Gaps = 14/189 (7%)
Query: 117 TRLRKQSAELTVAKSAGEQMVVELQNILATLEMERDTLQQEVATLQAKISQERSSKTQAV 176
+L + K E V ++ L++ + E + +
Sbjct: 820 AIYNSLQTKLRLIKR--EPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIA 877
Query: 177 NLHKELEGRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECR-LQALNTELERNKH 235
L ++ L+ L N + + G+ +++++ + + L+A + E +
Sbjct: 878 VLLQKYNRILKKL-----ENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQS--- 929
Query: 236 RELQLAEDNRHLGEKVSSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASV 295
+ N L ++ L + + EL + + + ++ N A +
Sbjct: 930 ---LEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAEL 986
Query: 296 EIVKELKDL 304
E +++++DL
Sbjct: 987 ERLQKIEDL 995
Score = 48.5 bits (116), Expect = 2e-05
Identities = 30/247 (12%), Positives = 75/247 (30%), Gaps = 8/247 (3%)
Query: 143 ILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLH-KELEGRLQAL----NTELERNK 197
+LA LE ER + Q + L+ + + +L ++ ++++ N E K
Sbjct: 746 VLAQLEEERASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKK 805
Query: 198 HRELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKE 257
+ ++ L +SL+ + RL + ++ L + +
Sbjct: 806 TEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEA 865
Query: 258 CASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKES 317
K Q+ R ++ + E D + ++ L + E+
Sbjct: 866 LRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLG---SNETGDSITAVQAKLKNLEA 922
Query: 318 LLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKK 377
+ E + ++ +L + ++ ++S E +
Sbjct: 923 FDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTL 982
Query: 378 FSLQSDL 384
+ L
Sbjct: 983 LAELERL 989
Score = 45.4 bits (108), Expect = 1e-04
Identities = 25/221 (11%), Positives = 63/221 (28%), Gaps = 14/221 (6%)
Query: 263 LELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNG 322
+ + Q + AH+E +K+ K + E+ L K R L
Sbjct: 784 RDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLR---------LIKR 834
Query: 323 KEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQS 382
+ + +++ L++ E + + +K + + Q+ +
Sbjct: 835 EPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAV---LLQKYNRILKKLE 891
Query: 383 DLSVQTSEAAHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLET 442
+ + S + ++ A L+ + E S + +L +
Sbjct: 892 NWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYN 951
Query: 443 EQYFSTLYKTQAHELKEELDERSRNILELEEERGDLTHRLQ 483
L + + ++ + + RLQ
Sbjct: 952 GV--PELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQ 990
Score = 38.1 bits (89), Expect = 0.019
Identities = 25/182 (13%), Positives = 70/182 (38%), Gaps = 24/182 (13%)
Query: 924 MAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEM 983
+ + L +E ++ + + L K ++ + + + + +K + ++
Sbjct: 824 SLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKY 883
Query: 984 EKLHKQLKQEQLLKAQAVNKL----------AEIMNRKDINTTCKGKSKASSADVRKKEK 1033
++ K+L+ K+ + A++ N + + C+ S++D+
Sbjct: 884 NRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILA 943
Query: 1034 ECRKLQQ----ELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIE 1089
+ +L ELT+ ++ F ++ ++S E + L ++E + +IE
Sbjct: 944 QLTELNYNGVPELTERKDTFF------AQQWTGVKSS-AETYKNTLLAELE---RLQKIE 993
Query: 1090 QL 1091
L
Sbjct: 994 DL 995
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO
kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo
sapiens} SCOP: h.1.27.1
Length = 71
Score = 43.2 bits (101), Expect = 2e-05
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 949 KKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLH--KQLKQEQLLKAQAVNKLAE 1006
K I+ L ++ E+L +++ +EE + K K + E+ LK QAVNKLAE
Sbjct: 5 TKDIEILRRENEELTEKMKKAEEEYKLEKEEEISNLKAAFEKNINTERTLKTQAVNKLAE 64
Query: 1007 IMNRKDI 1013
IMNRKD
Sbjct: 65 IMNRKDF 71
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene,
zinc, ATP-binding, phorbol-ester binding; NMR {Homo
sapiens} SCOP: g.49.1.1 PDB: 1far_A
Length = 52
Score = 39.7 bits (93), Expect = 1e-04
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 1179 LKGHEFLNISYHMPTTCEVCPKPIWH 1204
L H F ++ C++C K + +
Sbjct: 1 LTTHNFARKTFLKLAFCDICQKFLLN 26
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome
segregation, cell adhesion, kleisin, MIT cell cycle;
HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP:
c.37.1.12
Length = 430
Score = 44.3 bits (105), Expect = 2e-04
Identities = 28/217 (12%), Positives = 71/217 (32%), Gaps = 14/217 (6%)
Query: 361 EKSKTLQSQ---------VEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAMLREA 411
+S L+S V ++ + ++A++KA ++ + V ++R
Sbjct: 52 VRSNHLRSNILKDLIYRGVLNDENSDDYDNEGAASSNPQSAYVKAFYQKGNKLVELMRII 111
Query: 412 KRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHELKEELDERSRNILEL 471
RN + Y S +D + + + + +++ ++ + +
Sbjct: 112 SRNGDTSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRM--F 169
Query: 472 EEERGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSK 531
EE G + ++ + + E L++S E +K + L
Sbjct: 170 EEVSGSIQYKKEYEELKEKIEKLSKSATESIKNRRRIHGELKTYKSPGLEVL--FQGPRG 227
Query: 532 ESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 568
+ R +QL + + + Q +K+
Sbjct: 228 SR-YDEAEGRFEVINNETEQLKAEEKKILNQFLKIKK 263
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 41.9 bits (98), Expect = 8e-04
Identities = 29/216 (13%), Positives = 70/216 (32%), Gaps = 27/216 (12%)
Query: 509 EKTMKELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQL-------MKDREDLQQ 561
+ + + A++ S ++ N ++ + L + +
Sbjct: 34 QLISSHARIGEEKARNILKYLSDLRVVQNRQKDYEGSTFTFIGLSLYSLHRLVRSGKVDA 93
Query: 562 QINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFR---NKTDAQRTYREILFLKSFQR 618
L+ EGK + V+ Y + + V K + K +R Y ++ F R
Sbjct: 94 IGKLMGEGKES--AVFNCYSEKFGECV--VKFHKVGHTSFKKVKEKRDYGDLHFSVLAIR 149
Query: 619 -----HPNIITMLDIY--KAVNNKDLYVVFEYMENDLNKVIRDKILKDVHIRYIMFQLCN 671
+ + + K + V+ E ++ +R + +V +
Sbjct: 150 SARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLD-----MILE 204
Query: 672 GLSYIHACKVMHRDLKPSNILIDKSCSIKIGDLGLA 707
++ + ++H DL N+L+ + I D +
Sbjct: 205 EVAKFYHRGIVHGDLSQYNVLVSEEGIWII-DFPQS 239
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich
domain, zinc-binding domain, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 74
Score = 38.4 bits (89), Expect = 0.001
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1172 EKPGIIALKGHEFLNISYHMPTTCEVCPKPIWHIIR 1207
E P ++ K H+F + + P C+VC + I +
Sbjct: 8 EPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNK 43
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding
protein, diacylglycerol, phorbol ester, TCR, T-cell,
structural genomics; NMR {Homo sapiens}
Length = 77
Score = 37.8 bits (88), Expect = 0.001
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 1168 RGGDEKPGIIALKGHEFLNISYHMPTTCEVCPKPIWHIIR 1207
RG ++ + +K HEF + PT C VC + +W + +
Sbjct: 10 RGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHEFVWGLNK 49
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain,
zinc-binding domain, endocytosis/exocytosis,signaling
protein complex; NMR {Rattus norvegicus}
Length = 66
Score = 36.7 bits (85), Expect = 0.003
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 1180 KGHEFLNISYHMPTTCEVCPKPIWHIIR 1207
H F + PT C C +W I R
Sbjct: 12 IQHNFEVWTATTPTYCYECEGLLWGIAR 39
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex,
cytoplasm, ribonucleoprotein, structural protein; 3.50A
{Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Length = 861
Score = 41.0 bits (95), Expect = 0.003
Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 22/244 (9%)
Query: 33 RREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRADNESETK 92
R + E + + AR+ A+ + G + ++ + + + + R + +
Sbjct: 600 RMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVSSVDVQSVEPVDQRTRDALQRSVQ 659
Query: 93 KKAEV--NLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNILATLEME 150
E+ N Q + HE + E E RL +Q + ++EL+ + +E
Sbjct: 660 LAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEAMSMAVEST 719
Query: 151 RDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAEDNRHL 210
A +++ R +EG L +L+ AE R
Sbjct: 720 G----NAKAEAESRAEAAR------------IEGEGSVLQAKLKAQALAIETEAELERVK 763
Query: 211 GEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLELKAAQA 270
+ E E ELE +K ++L E + + L++ Q
Sbjct: 764 KVR----EMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGPGTIRDLAVAGPEMQV 819
Query: 271 QYQQ 274
+ Q
Sbjct: 820 KLLQ 823
Score = 40.6 bits (94), Expect = 0.003
Identities = 28/204 (13%), Positives = 63/204 (30%), Gaps = 11/204 (5%)
Query: 325 REVDYKKSIDQLMKDRED-LQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQSD 383
R + D K+ ++ + + + + + Q Q D
Sbjct: 580 RGAVASVTFDDFHKNSARIIRMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVSSVD 639
Query: 384 LSVQTSEAAHLKAREEQLSH--EVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLE 441
+ + ++ + + E +L+ + L+ +++ DQ E
Sbjct: 640 VQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGR-LERQKILDQSE 698
Query: 442 TEQYFSTLYKTQAHELKEELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEE 501
E+ L + +A + E ++ E E + + A+ ++ALA E
Sbjct: 699 AEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAE 758
Query: 502 TV-------GELEKEKTMKELELK 518
EL + ELE+
Sbjct: 759 LERVKKVREMELIYARAQLELEVS 782
Score = 37.1 bits (85), Expect = 0.038
Identities = 27/204 (13%), Positives = 69/204 (33%), Gaps = 4/204 (1%)
Query: 28 LLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRADN 87
+ + +S ++ + + +Q + + + +H+ + ++ A
Sbjct: 627 VFPQNGLVVSSVDVQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARG 686
Query: 88 ESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNILATL 147
E ++K + E L+ EA + + A+S E +E + +
Sbjct: 687 RLE-RQKILDQSEAEKARKELLELEAMSM-AVESTGNAKAEAESRAEAARIEGEGSVLQA 744
Query: 148 EMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAEDN 207
+++ L E ++ + R + ELE +E K +E+ A
Sbjct: 745 KLKAQALAIETEAELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGP 804
Query: 208 RHLGEKVSSLE--KECRLQALNTE 229
+ + + + LQ+L +
Sbjct: 805 GTIRDLAVAGPEMQVKLLQSLGLK 828
Score = 32.9 bits (74), Expect = 0.89
Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 5/165 (3%)
Query: 10 QVDNAIPNGGQANGELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEK 69
VD + Q + +L + +E + E QR E + ++ + E + K
Sbjct: 645 PVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARK 704
Query: 70 NLTILRHDLKESQRRADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVA 129
L L + + ++E + +AE I L+ + + + AEL
Sbjct: 705 ELLELEAMSMAVESTGNAKAEAESRAEA--ARIEGEGSVLQAKLKAQALAIETEAELERV 762
Query: 130 KSAGEQMVVELQNILATLEMERDTLQQEVATLQAKISQERSSKTQ 174
K E EL A LE+E QQ K + +
Sbjct: 763 KKVREM---ELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGP 804
Score = 30.9 bits (69), Expect = 3.5
Identities = 33/234 (14%), Positives = 63/234 (26%), Gaps = 15/234 (6%)
Query: 177 NLHKELEGRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKHR 236
+ HK ++ E ++ + + V +E R
Sbjct: 590 DFHKNSARIIRMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVSSVDVQSVEPVDQR 649
Query: 237 ELQLAEDNRHLGEKVSSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVE 296
+ + L E S K + +QE R E QK ++ E + +
Sbjct: 650 TRDALQRSVQLAI-----EITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARK 704
Query: 297 IVKEL------KDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLL 350
+ EL + +++ S+ E V K Q + + + +
Sbjct: 705 ELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELERVKK 764
Query: 351 KEGAELRQELEKSKT----LQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQ 400
EL + + Q E K + L T + E Q
Sbjct: 765 VREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGPGTIRDLAVAGPEMQ 818
Score = 30.2 bits (67), Expect = 5.8
Identities = 29/243 (11%), Positives = 66/243 (27%), Gaps = 6/243 (2%)
Query: 140 LQNILATLEMER--DTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNK 197
++ +A++ + + + + L K + + N + +
Sbjct: 579 VRGAVASVTFDDFHKNSARIIRMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVSSV 638
Query: 198 HRELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKE 257
+ D R S++ + + E + E L + + E
Sbjct: 639 DVQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSE 698
Query: 258 CASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKES 317
EL +A V + + E A +E + K ++ E+
Sbjct: 699 AEKARKELLELEAM-SMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEA 757
Query: 318 LLSNGK---EREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQ 374
L K E E+ Y ++ +L + + K + + E
Sbjct: 758 ELERVKKVREMELIYARAQLELEVSKAQQLANVEAKKFKEMTEALGPGTIRDLAVAGPEM 817
Query: 375 AKK 377
K
Sbjct: 818 QVK 820
>2a6h_D DNA-directed RNA polymerase beta' chain; RNA polymerase holoenzyme,
streptolydigin, antibiotic, transcription regulation;
HET: STD; 2.40A {Thermus thermophilus} SCOP: e.29.1.2
PDB: 1smy_D* 1zyr_D* 1iw7_D* 2a69_D* 2a6e_D 2a68_D*
2be5_D* 2cw0_D 2o5i_D 2o5j_D* 2ppb_D* 3aoh_D* 3aoi_D*
3dxj_D* 3eql_D* 1ynj_D* 1l9z_D 1l9u_D* 1ynn_D* 2auj_D
Length = 1524
Score = 40.5 bits (95), Expect = 0.004
Identities = 37/360 (10%), Positives = 99/360 (27%), Gaps = 42/360 (11%)
Query: 24 ELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQR 83
+ + L + E RE+ ++ L +A+ + ++ L
Sbjct: 149 KRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLDGVALYRFP 208
Query: 84 RADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNI 143
R KK+ RL +A + +++ EL
Sbjct: 209 RRVRVEYVKKE-------------------RAGLRL-PLAAWVEKEAYKPGEILAELPEP 248
Query: 144 L-----ATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKH 198
+E L++ + + + ++ V + + +
Sbjct: 249 YLFRAEEEGVVELKELEEGAFLVLRREDEPVATYFLPVGMTPLVVHGEIVEKGQPLAEAK 308
Query: 199 RELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKEC 258
L++ R + + L LE + ++ ++ + + + +E
Sbjct: 309 GLLRMPRQVRAAQVEAEEEGE---TVYLTLFLEWTEPKDYRVQPHMNVVVPEGARVEAGD 365
Query: 259 ASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEE---ASVEIVKELKDLMAKHRSDLSSK 315
++ + + E H S +V K ++ D +A
Sbjct: 366 KIVAAIDPEEEVIAEAEGVVHLHEPASILVVKARVYPFEDDVEVSTGDRVAPGDVLADGG 425
Query: 316 ESLL-SNGKEREVDYKKSIDQLMKDR----------EDLQQQINLLKEGAELRQELEKSK 364
+ G+ + + + + L ++++L EL +E++
Sbjct: 426 KVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEEMKHPS 485
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal
transduction, apoptosis, cysteine rich domain, metal
binding protein; NMR {Mus musculus}
Length = 59
Score = 36.0 bits (83), Expect = 0.004
Identities = 6/25 (24%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 1180 KGHEFLNIS-YHMPTTCEVCPKPIW 1203
+GH F+ ++ P C++C + +
Sbjct: 9 EGHRFVELALRGGPGWCDLCGREVL 33
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets,
alpha helices, AMY amyloidosis, blood coagulation,
disease mutation, glycoprot phosphoprotein; HET: NAG NDG
BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Length = 411
Score = 39.9 bits (93), Expect = 0.005
Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 41/167 (24%)
Query: 953 DQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKD 1012
D L + + + + L++ L + N + E+++L K ++ + + + K
Sbjct: 27 DFLSTYQTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLK- 85
Query: 1013 INTTCKGKSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENT 1072
+++ +E K+ ++ ++ LQ
Sbjct: 86 --------------------------SRKMLEEIMKYEASILTHDSSIRYLQEIY----- 114
Query: 1073 SKLKLQMELDSKDSEIEQLQGKLAALGSETASLSSADVENDESYVQD 1119
+S + +I L+ K+A L ++ V+ + +D
Sbjct: 115 ---------NSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKD 152
Score = 33.7 bits (77), Expect = 0.39
Identities = 16/131 (12%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 247 LGEKVSSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMA 306
+ + +S+ + + L+ +V K + + +++
Sbjct: 25 IADFLSTYQTKVDKDLQSLE----DILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMID 80
Query: 307 KHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEG-AELRQELEKSKT 365
+ + + + SI L + Q+I LKE A+L + ++
Sbjct: 81 AATLKSRKMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCK 140
Query: 366 LQSQVEQEQAK 376
Q+ K
Sbjct: 141 DTVQIHDITGK 151
Score = 32.2 bits (73), Expect = 1.1
Identities = 13/113 (11%), Positives = 36/113 (31%), Gaps = 10/113 (8%)
Query: 456 ELKEELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKEL 515
+ + L + + + D+ H+++ S ++ + ++ E
Sbjct: 24 GIADFLSTYQTKVDKDLQSLEDILHQVENKT----------SEVKQLIKAIQLTYNPDES 73
Query: 516 ELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 568
+++ + + + + SI L + Q+I LKE
Sbjct: 74 SKPNMIDAATLKSRKMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKE 126
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 83
Score = 36.3 bits (84), Expect = 0.005
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 1180 KGHEFLNISYHMPTTCEVCPKPIWHIIR 1207
K HEF+ + PT C VC +W + +
Sbjct: 16 KNHEFIATFFGQPTFCSVCKDFVWGLNK 43
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding
protein, diacylglycerol, phorbol ester, TCR, T-cell,
structural genomics; NMR {Homo sapiens}
Length = 65
Score = 35.1 bits (81), Expect = 0.008
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 1180 KGHEFLNISYHMPTTCEVCPKPIWHIIR 1207
H F +Y PT CE C +W + R
Sbjct: 11 MPHRFKVYNYKSPTFCEHCGTLLWGLAR 38
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 85
Score = 36.0 bits (83), Expect = 0.008
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 1180 KGHEFLNISYHMPTTCEVCPKPIWHIIR 1207
H+F +Y PT C+ C ++ +I
Sbjct: 16 SKHKFKIHTYGSPTFCDHCGSLLYGLIH 43
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus}
SCOP: g.49.1.1 PDB: 1ptr_A*
Length = 50
Score = 33.6 bits (77), Expect = 0.020
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 1182 HEFLNISYHMPTTCEVCPKPIWHIIR 1207
H F +Y PT C+ C +W +++
Sbjct: 1 HRFKVYNYMSPTFCDHCGSLLWGLVK 26
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis,
cysteine rich domain; NMR {Mus musculus}
Length = 72
Score = 34.1 bits (78), Expect = 0.022
Identities = 6/25 (24%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 1180 KGHEFLNIS-YHMPTTCEVCPKPIW 1203
+GH F+ ++ P C++C + +
Sbjct: 22 EGHRFVELALRGGPGWCDLCGREVL 46
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament,
structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Length = 93
Score = 34.5 bits (80), Expect = 0.025
Identities = 19/69 (27%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1028 VRKKEKECRKLQQELTQEREKF-NQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDS 1086
VR E++ + L EL Q + + +++ ++E++EL+ QV + K ++++E D+
Sbjct: 25 VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE 84
Query: 1087 EIEQLQGKL 1095
+I +L+ KL
Sbjct: 85 DIMRLREKL 93
Score = 28.3 bits (64), Expect = 4.4
Identities = 12/39 (30%), Positives = 26/39 (66%)
Query: 808 QKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKL 846
++E++EL+ QV + K ++++E D+ +I +L+ KL
Sbjct: 55 EEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKL 93
>2xs1_A Programmed cell death 6-interacting protein; protein
transport-viral protein complex, cell cycle; 2.30A {Homo
sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A
2ojq_A
Length = 704
Score = 37.6 bits (86), Expect = 0.027
Identities = 45/302 (14%), Positives = 97/302 (32%), Gaps = 17/302 (5%)
Query: 98 NLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNILATLEMERDTLQQE 157
+ +S A + + A++ A + ++ L A ++ DT+ Q
Sbjct: 363 KMVPVSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQS 422
Query: 158 VATLQAKISQE------RSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAEDNRHLG 211
+ T + ++ + L + L L+ + + L +
Sbjct: 423 ILTKSRSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKERW 482
Query: 212 EKVSSLEKECRLQA----LNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLELKA 267
++ S E L+A T L++ + Q+ E + + + L K L+ + +
Sbjct: 483 QRTPSNELYKPLRAEGTNFRTVLDKAVQADGQVKECYQSHRDTIVLLCKPEPELNAAIPS 542
Query: 268 AQAQYQQEVRAHEETQKSRMVNKEEASVE---IVKELKDLMAKHRSDLSSKESLLSNGKE 324
A + KS + N +E E + +LK + S + + E
Sbjct: 543 ANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINE 602
Query: 325 REVDYKKSIDQLMKDREDLQQ----QINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSL 380
+ + +Q+ Q LLK QE K K ++ + +L
Sbjct: 603 EALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNL 662
Query: 381 QS 382
+
Sbjct: 663 AT 664
Score = 37.2 bits (85), Expect = 0.041
Identities = 52/344 (15%), Positives = 103/344 (29%), Gaps = 44/344 (12%)
Query: 20 QANGELKDLLERERREMSQLEERQRQLSEQYEAVSARET--ALRDEMGQLEKNLTILRHD 77
ANG L L E + + + + +V + + + +L + L R
Sbjct: 397 LANGVLASLNLPAAIEDVSGDTVPQSILTKSRSVIEQGGIQTVDQLIKELPELLQRNREI 456
Query: 78 LKESQRRADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMV 137
L ES R D E T + + L A A Q+
Sbjct: 457 LDESLRLLDEEEATDNDLRAKFKERWQRTPSNELYKPLRAEGTNFRTVLDKAVQADGQVK 516
Query: 138 VELQNILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNK 197
Q+ T+ + L + L A I +KT E+ L++L + L+ K
Sbjct: 517 ECYQSHRDTIVL----LCKPEPELNAAIPSANPAKTMQG---SEVVNVLKSLLSNLDEVK 569
Query: 198 HRELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKE 257
L D + + ++S K A + + +L L KV K+
Sbjct: 570 KEREGLENDLKSVNFDMTS--KFLTALAQDGVINEEALSVTELDRVYGGLTTKVQESLKK 627
Query: 258 CASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKES 317
L ++ + ++ + +++ E V K
Sbjct: 628 QEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKN-------------------------- 661
Query: 318 LLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELE 361
L+ + V+ ++ + K +L + + + +
Sbjct: 662 -LATAYDNFVELVANLKEGTKFYNELTEILV------RFQNKCS 698
Score = 31.5 bits (70), Expect = 2.0
Identities = 39/342 (11%), Positives = 95/342 (27%), Gaps = 25/342 (7%)
Query: 772 LIVNLVRPNPPHADKFYAGFKSKHEREKFNQVVVK---CQKELQELQSQVVEENTSKLKL 828
L +V + + Y K+ Q+ L L E+ S +
Sbjct: 360 LFEKMVPVSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTV 419
Query: 829 QMELDSKDSEIEQLQGKLAALGSETASLSSADVENDESYVQDSRLEGWVSIPNKQNIKRH 888
+ +K + + QG + + L N E + RL + +
Sbjct: 420 PQSILTKSRSVIE-QGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKF 478
Query: 889 GWKKQYVVVSSKKIIFYNSEND-----KQNTDPELELKDLMAKHRSDL------------ 931
+ Q + + + + ++K+ HR +
Sbjct: 479 KERWQRTPSNELYKPLRAEGTNFRTVLDKAVQADGQVKECYQSHRDTIVLLCKPEPELNA 538
Query: 932 ---SSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHK 988
S+ + G E K + L + +++ + N LK ++
Sbjct: 539 AIPSANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDG 598
Query: 989 QLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKKEKECRKLQQELTQEREK 1048
+ +E L + + + + + + ++ + ++ E RE+
Sbjct: 599 VINEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNE-ANLREE 657
Query: 1049 FNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQ 1090
+ + EL + + E +L L ++
Sbjct: 658 VLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSD 699
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine
activation, complex (transcription factor/DNA),
transcription/DNA complex; HET: DNA PTR; 2.25A {Mus
musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Length = 596
Score = 37.1 bits (85), Expect = 0.035
Identities = 15/135 (11%), Positives = 55/135 (40%), Gaps = 11/135 (8%)
Query: 962 LQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKS 1021
+ ++ +L++ L+ +++E+ K ++ Q + ++ D+ +
Sbjct: 11 VTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQ---DDFDFNYKTLKSQGDMQDL----N 63
Query: 1022 KASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMEL 1081
+ + R+K ++ ++ L Q R + ++ +Q + +E + K + ++
Sbjct: 64 GNNQSVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQI 123
Query: 1082 ----DSKDSEIEQLQ 1092
+ +++L+
Sbjct: 124 ACIGGPPNICLDRLE 138
Score = 32.1 bits (72), Expect = 1.2
Identities = 23/185 (12%), Positives = 62/185 (33%), Gaps = 5/185 (2%)
Query: 931 LSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQL 990
++ K+ +L + + ++Q MK E+LQ + + L+ + +
Sbjct: 11 VTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDMQDLNGNNQSVT 70
Query: 991 KQEQLLKAQAVNKLAEIMNRKDINTTCK---GKSKASSADVRKKEKECRKLQQELTQERE 1047
+Q+ Q + L + R+ I + + + +E K +Q++
Sbjct: 71 RQKMQQLEQMLTALDQ--MRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGG 128
Query: 1048 KFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASLSS 1107
N + + + + L ++ KL+ + + + L L
Sbjct: 129 PPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQHRPMLEERIVELFR 188
Query: 1108 ADVEN 1112
+++
Sbjct: 189 NLMKS 193
Score = 29.4 bits (65), Expect = 8.0
Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 15/173 (8%)
Query: 36 MSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRADNESETKKKA 95
+ + E+Q+ L + + V R L +M +E + K + + D +
Sbjct: 8 AAVVTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDMQDLNGNNQ 67
Query: 96 EVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVE-----------LQNIL 144
V Q + + + L + + + A L A ++ + + + I
Sbjct: 68 SVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIG 127
Query: 145 ATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNK 197
+ D L+ + +L Q R Q + +EL+ ++ + +++
Sbjct: 128 GPPNICLDRLENWITSLAESQLQTR----QQIKKLEELQQKVSYKGDPIVQHR 176
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane
protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Length = 602
Score = 37.0 bits (84), Expect = 0.043
Identities = 46/418 (11%), Positives = 123/418 (29%), Gaps = 4/418 (0%)
Query: 26 KDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRA 85
D+ +R++ + Q E + L + EK+ L+ + A
Sbjct: 46 SDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAGNADAA 105
Query: 86 DNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNILA 145
D + + + L+ E +A RL +S L + E ++++
Sbjct: 106 DITRQEFRLLQAELREYGFRTEIAGYDAL---RLHTESRMLFADADSLRISPREARSLIE 162
Query: 146 TLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAE 205
E + Q +++ K ELE A L+ + R L
Sbjct: 163 QAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQQT 222
Query: 206 DNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLEL 265
N + + + ++LNT E QL + K ++ S
Sbjct: 223 RNDRAISEARN-KLSSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVSPEKFPGRSSTN 281
Query: 266 KAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKER 325
+ + S +++ ++ ++ + + ++
Sbjct: 282 DSIVVSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNILNDRNPVVTEDVEGDK 341
Query: 326 EVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQSDLS 385
++ + + + L + + + + ++ + +L +
Sbjct: 342 KIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKE 401
Query: 386 VQTSEAAHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETE 443
++ + + + + + L+ K I LK+ + ++L ++ +
Sbjct: 402 NIRNQLSGINQKIAEEKRKQDELKATKDAINFTTEFLKSVSEKYGAKAEQLAREMAGQ 459
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 36.5 bits (85), Expect = 0.059
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKT-----DAQRTYREILFLKSFQRHPNII 623
GKGA + + + + +++ + +R++ RT RE +L + I
Sbjct: 345 GKGAEADIKRD-SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDF-GIP 402
Query: 624 TMLDIYKAVNNKDLYVVFEYMENDLNKVIRDKILKDV--HIRYIMFQLCNGLSYIHACKV 681
I+ V+ + ++ Y I K+ KDV I +++ + +H V
Sbjct: 403 APY-IFD-VDLDNKRIMMSY--------INGKLAKDVIEDNLDIAYKIGEIVGKLHKNDV 452
Query: 682 MHRDLKPSNILIDKSCSIKIGDLGLARSLSDSKE 715
+H DL SN + DK I I D GL + +S+ E
Sbjct: 453 IHNDLTTSNFIFDKDLYI-I-DFGLGK-ISNLDE 483
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; HET: SSA; 2.60A {Pyrococcus
horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Length = 455
Score = 36.0 bits (84), Expect = 0.067
Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 276 VRAHEETQKSRMVNK-EEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSID 334
+R + E K+ ++ + E V+ V E+ L + R+ L L + I
Sbjct: 7 IRENPELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNKI----AVEIG 62
Query: 335 QLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQE 373
+ K E + + LL + E+ + + + + +++++
Sbjct: 63 KRRKKGEPVDE---LLAKSREIVKRIGELENEVEELKKK 98
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A
{Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20
c.37.1.20
Length = 854
Score = 36.0 bits (84), Expect = 0.089
Identities = 14/89 (15%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 26 KDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRRA 85
++ L+ E+++L E +L ++E E + ++ + + L +R +++ ++R+
Sbjct: 429 QERLKAIEAEIAKLTEEIAKLRAEWER----EREILRKLREAQHRLDEVRREIELAERQY 484
Query: 86 DNESETKKKAEVNLQVISDMHEKLKTEAE 114
D + AE+ + + +++ +E
Sbjct: 485 DLN----RAAELRYGELPKLEAEVEALSE 509
Score = 33.7 bits (78), Expect = 0.47
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 459 EELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKELELK 518
EE+D R L+LE ER A+ + ++E + +E E E+
Sbjct: 401 EEIDALERKKLQLEIER--------EALKKEKDPD-----SQERLKAIEAEIAKLTEEIA 447
Query: 519 DLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGKGAYG 574
L A+ + +E L + + + +D++ ++ E ++Q +L + + YG
Sbjct: 448 KLRAEWERE---REIL-----RKLREAQHRLDEVRREIELAERQYDLNRAAELRYG 495
Score = 30.2 bits (69), Expect = 5.9
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
Query: 144 LATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQL 203
L +E E L +E+A L+A+ +E +E+ +L+ L+ + E++L
Sbjct: 432 LKAIEAEIAKLTEEIAKLRAEWERE-----------REILRKLREAQHRLDEVRR-EIEL 479
Query: 204 AEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLE 255
AE L + + L + L L E+E + R + +V+ +
Sbjct: 480 AERQYDL-NRAAEL-RYGELPKLEAEVEALSEKL----RGARFVRLEVTEED 525
Score = 29.8 bits (68), Expect = 6.8
Identities = 24/136 (17%), Positives = 60/136 (44%), Gaps = 28/136 (20%)
Query: 228 TELERNKHRELQL--------AEDNRHLGEKVSSLEKECASLSLELKAAQAQYQQEVRAH 279
E++ + ++LQL E + E++ ++E E A L+ E+ +A++++E
Sbjct: 401 EEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREIL 460
Query: 280 EETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKD 339
+ ++++ +E EI A+ + DL + E+ Y + + +L +
Sbjct: 461 RKLREAQ-HRLDEVRREIEL------AERQYDL---------NRAAELRYGE-LPKLEAE 503
Query: 340 REDLQQQIN---LLKE 352
E L +++ ++
Sbjct: 504 VEALSEKLRGARFVRL 519
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling
protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB:
3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Length = 120
Score = 33.4 bits (76), Expect = 0.11
Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPE--LELKDLMAKHRSDL 931
G++ +++ + K Y V++ + + + + K++ P L L + S
Sbjct: 9 SGFL---ERRSKFLKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRK 65
Query: 932 SSKESLLSNGKER 944
+S S S G +
Sbjct: 66 NSTSSPNSTGSDA 78
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein,
muscle, Z- LINE, actin-binding protein; 2.8A {Homo
sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Length = 476
Score = 35.2 bits (80), Expect = 0.14
Identities = 57/414 (13%), Positives = 120/414 (28%), Gaps = 22/414 (5%)
Query: 152 DTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQLAEDNRHLG 211
T+Q L+ R K V +LE L T+L + +E
Sbjct: 41 KTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSD 100
Query: 212 EKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLELKAAQAQ 271
+ E + L R +L +K S+ E L +
Sbjct: 101 IAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYE 160
Query: 272 YQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKK 331
+K + A+ + E + + +E
Sbjct: 161 SASLTEVRALLRKHEAFESDLAAHQ----------------DRVEQIAAIAQELNELDYH 204
Query: 332 SIDQLMKDREDLQQQINLLKEGAELR-QELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSE 390
+ + + Q + L + R + LE+ + L ++Q + + +
Sbjct: 205 DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEG 264
Query: 391 AAHLKAREEQLSH--EVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFST 448
A + E+ L A + + +R E++ +++ +
Sbjct: 265 AMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRIS 324
Query: 449 LYKTQAHELKEELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEETVGELEK 508
+ +EL + + +L R LQ +AR + R +
Sbjct: 325 SSNPYSTVTMDELRTKWDKVKQLVPIRD---QSLQEELARQHANERLRRQFAAQANAIGP 381
Query: 509 EKTMKELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQ 562
K E+ + L + + L + ++YK +ID+L D + +Q+
Sbjct: 382 WIQNKMEEIARSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEA 435
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon,
coiled post-transcriptional, gene regulation, chaperone;
HET: EPE; 2.20A {Helicobacter pylori}
Length = 256
Score = 34.7 bits (79), Expect = 0.15
Identities = 20/179 (11%), Positives = 58/179 (32%), Gaps = 3/179 (1%)
Query: 135 QMVVELQNI---LATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNT 191
+ ++E+ ++ + +LE ++++ + + L+ ++
Sbjct: 8 KQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQ 67
Query: 192 ELERNKHRELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKV 251
L+ + + + + + + L + + EK
Sbjct: 68 TLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQ 127
Query: 252 SSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRS 310
L+KE L ++ + EV+ +ETQ+ KE+ + ++ + R
Sbjct: 128 EDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYERIRR 186
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings,
fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus
gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Length = 491
Score = 34.9 bits (79), Expect = 0.16
Identities = 25/186 (13%), Positives = 70/186 (37%), Gaps = 8/186 (4%)
Query: 296 EIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEGAE 355
I ++L D K+++ ++ K ++ + +L+++I LK+
Sbjct: 69 NIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVSTELRRRIVTLKQ--R 126
Query: 356 LRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAMLREAKRNI 415
+ ++ + K LQ+ ++++ + L+ D+ ++ AR + ++++
Sbjct: 127 VATQVNRIKALQNSIQEQVVEMKRLEVDIDIKIRACKGSCARSFDYQVDKEGYDNIQKHL 186
Query: 416 E----EEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHELKEELDERSRNILEL 471
+ H ++ L+M+ L+D E + + + + + L
Sbjct: 187 TQASSIDMHPDFQTTTLSTLKMRPLKDSNVPEHFKLKPSPEM--QAMSAFNNIKQMQVVL 244
Query: 472 EEERGD 477
E D
Sbjct: 245 ERPETD 250
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis,
GDP, GMP, dynamin related, large GTPase family. GMPPNP,
GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1
c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Length = 592
Score = 34.9 bits (79), Expect = 0.19
Identities = 37/216 (17%), Positives = 76/216 (35%), Gaps = 7/216 (3%)
Query: 891 KKQYVVVSSKKIIFYNSENDKQNTDPELELKDLMAKHRSDLSSKESLLSNGKEREVDYKK 950
K+ + K+ F + + L+ + + ++ + G V +
Sbjct: 382 KELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQ 441
Query: 951 SIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNR 1010
+ + + Q + + KS S + L+ +Q L + E +
Sbjct: 442 DLKKKYYEEPRKGIQAEEILQTYLKSKESMTDA-----ILQTDQTLTEKEKEIEVERVKA 496
Query: 1011 KDINTTCKGKSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEE 1070
+ + K + + + E++ R Q+ L Q EK V+ KE + + ++E
Sbjct: 497 ESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQE 556
Query: 1071 NTSKLK--LQMELDSKDSEIEQLQGKLAALGSETAS 1104
LK Q E +EI+ LQ K+ + T S
Sbjct: 557 QEQLLKEGFQKESRIMKNEIQDLQTKMRRRKACTIS 592
Score = 30.7 bits (68), Expect = 3.2
Identities = 34/282 (12%), Positives = 89/282 (31%), Gaps = 23/282 (8%)
Query: 794 KHEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSET 853
H ++ Q V + LQEL + +++ + KD + + A L +
Sbjct: 333 AHYEQQMGQKVQLPTESLQELLDLHRDSEREAIEVFIRSSFKDVDHLFQKELAAQLEKKR 392
Query: 854 ASLSSADVENDESYVQDSRLEGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQN 913
+ E + + + + Y + K ++
Sbjct: 393 DDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPR 452
Query: 914 TDPELELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEEL 973
+ E +++ + S + + + +K I+ E Q +L E
Sbjct: 453 KGIQAE--EILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQ 510
Query: 974 RKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKKEK 1033
RK+ E+ E+ +++ ++ K + + + K ++
Sbjct: 511 RKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLA--------------LKLQE 556
Query: 1034 ECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKL 1075
+ + L++ +E + E+Q+LQ+++ +
Sbjct: 557 QEQLLKEGFQKESRIM-------KNEIQDLQTKMRRRKACTI 591
Score = 30.3 bits (67), Expect = 4.1
Identities = 32/212 (15%), Positives = 66/212 (31%), Gaps = 6/212 (2%)
Query: 24 ELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQR 83
EL LE++R + + + + + R +++ Q
Sbjct: 383 ELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAGIYSKPGGYRLFVQKLQD 442
Query: 84 RADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNI 143
E +K +++ + ++ + + + E Q
Sbjct: 443 LKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQAS 502
Query: 144 LATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQL 203
L + +Q + +ERS + L +++E L E ER +LQ
Sbjct: 503 AKMLHEMQRKNEQMMEQ------KERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQE 556
Query: 204 AEDNRHLGEKVSSLEKECRLQALNTELERNKH 235
E G + S + +Q L T++ R K
Sbjct: 557 QEQLLKEGFQKESRIMKNEIQDLQTKMRRRKA 588
Score = 30.3 bits (67), Expect = 4.3
Identities = 32/242 (13%), Positives = 79/242 (32%), Gaps = 18/242 (7%)
Query: 212 EKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLELKAAQAQ 271
+++ L ++ +A+ + + E + LEK+ + + A +
Sbjct: 351 QELLDLHRDSEREAIEVFIRSSFKDVDH-----LFQKELAAQLEKKRDDFCKQNQEASSD 405
Query: 272 YQQEVRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKK 331
+ + V S + + K + G + E +
Sbjct: 406 RCSGLLQVIFSPLEEEVKAGIYSKP--GGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQT 463
Query: 332 SIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEA 391
+ + + Q L E E E+E+ K +Q + + +++ ++ E
Sbjct: 464 YLKSKESMTDAILQTDQTLTE-KEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKER 522
Query: 392 AHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQ---------MKELQDQLET 442
++ + +QL+ ++ R +E LK + + L+ MK L+T
Sbjct: 523 SY-QEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQT 581
Query: 443 EQ 444
+
Sbjct: 582 KM 583
Score = 29.9 bits (66), Expect = 5.9
Identities = 36/239 (15%), Positives = 78/239 (32%), Gaps = 26/239 (10%)
Query: 878 SIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPELELKDLMAKHRSDLSSKESL 937
+P +N + + K I Y + ++ P L++L+ HR +
Sbjct: 308 DLPCMENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTESLQELLDLHRDSEREAIEV 367
Query: 938 L---SNGKEREVDYKKSIDQLMKDREDLQQQ-------------INLLKEELRKSSNSSE 981
S + K+ QL K R+D +Q + +
Sbjct: 368 FIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKAGIY 427
Query: 982 EMEKLHKQLKQ----------EQLLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKK 1031
++ Q E+ K ++ + + + T + ++K
Sbjct: 428 SKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEK 487
Query: 1032 EKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQ 1090
E E +++ E Q K + + +++ E + + +E+ +L +ME D EQ
Sbjct: 488 EIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQ 546
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta;
complex (SH2 domain/DNA), SH2 domain, transcription
factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1
b.2.5.5 d.93.1.1
Length = 575
Score = 34.8 bits (79), Expect = 0.20
Identities = 17/142 (11%), Positives = 54/142 (38%), Gaps = 16/142 (11%)
Query: 961 DLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKGK 1020
D Q++++ ++ E K + L+ E K + + N
Sbjct: 2 DKQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNREHETNG---------- 51
Query: 1021 SKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQME 1080
+ +D ++++ +K+ L +R++ +++ + Q+ ++ + + K + +
Sbjct: 52 --VAKSDQKQEQLLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEWKRRQQ 109
Query: 1081 L----DSKDSEIEQLQGKLAAL 1098
++ ++QLQ +
Sbjct: 110 SACIGGPPNACLDQLQNWFTIV 131
Score = 31.0 bits (69), Expect = 2.5
Identities = 28/175 (16%), Positives = 62/175 (35%), Gaps = 8/175 (4%)
Query: 397 REEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQ--- 453
++++L +V +++ IE E L+ + D + K LQ++ + + Q
Sbjct: 3 KQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNREHETNGVAKSDQKQEQL 62
Query: 454 -AHELKEELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEETVG---ELEKE 509
++ LD + + ++ E ++T Q A+ + R +G +
Sbjct: 63 LLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEWKRRQQSACIGGPPNACLD 122
Query: 510 KTMKELE-LKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQI 563
+ + + + + R L E L K+ L L QQ+
Sbjct: 123 QLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHDPITKNKQVLWDRTFSLFQQL 177
Score = 29.4 bits (65), Expect = 9.6
Identities = 26/167 (15%), Positives = 51/167 (30%), Gaps = 13/167 (7%)
Query: 41 ERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRR-ADNESETKKKAEVNL 99
++Q++L + V + + E+ LE K Q R + K +
Sbjct: 2 DKQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNREHETNGVAKSDQKQEQ 61
Query: 100 QVISDMHEKLKTE--------AETATRLRKQSAELTVAKSAGEQMVVELQNILATLEMER 151
++ M+ L + E L + + + I
Sbjct: 62 LLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEWKRRQQSACIGGPPNACL 121
Query: 152 DTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKH 198
D LQ + + Q R Q + +ELE + + + +NK
Sbjct: 122 DQLQNWFTIVAESLQQVR----QQLKKLEELEQKYTYEHDPITKNKQ 164
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets,
alpha helices, AMY amyloidosis, blood coagulation,
disease mutation, glycoprot phosphoprotein; HET: NAG NDG
BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B*
1deq_B 2a45_H*
Length = 461
Score = 34.6 bits (79), Expect = 0.22
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 4/103 (3%)
Query: 398 EEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHEL 457
+E L + +R + + + S M L+D + Q + +E
Sbjct: 83 QEALLQQERPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEY 142
Query: 458 KEELDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAE 500
EL++ I E L V R+ E L I +
Sbjct: 143 SSELEKHQLYIDETVNSN----IPTNLRVLRSILENLRSKIQK 181
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis,
CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA
synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A*
3qo8_A* 3qo5_A
Length = 485
Score = 34.5 bits (80), Expect = 0.22
Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 293 ASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 352
SVE+V E+ + + ++ +K I + K +ED + L+ E
Sbjct: 27 DSVELVDEIIAEYKEWVKLRFDLDEH----NKKLNSVQKEIGKRFKAKEDAKD---LIAE 79
Query: 353 GAELRQELEKSKTLQSQVEQEQAKK 377
+L E ++ +++ ++ K
Sbjct: 80 KEKLSNEKKEIIEKEAEADKNLRSK 104
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics,
NPPSFA, nationa on protein structural and functional
analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Length = 425
Score = 34.0 bits (79), Expect = 0.26
Identities = 20/98 (20%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 276 VRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQ 335
+R + K R+ +++ V +V ++ +L + R + E+L S + K I +
Sbjct: 7 IREKPDYVKERLATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLS----KEIGK 62
Query: 336 LMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQE 373
L ++ +D + + EL++E+++ + +VE+E
Sbjct: 63 LKREGKDTTE---IQNRVKELKEEIDRLEEELRKVEEE 97
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen,
blood clotting; HET: NDG NAG; 2.70A {Gallus gallus}
SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Length = 409
Score = 34.1 bits (78), Expect = 0.27
Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 16/129 (12%)
Query: 221 CRLQALNTELERNKHRELQLAEDNRH-LGEKVSSLEKECASLSLELKAAQAQYQQEVRAH 279
C + + EL E S+E + + + Q +
Sbjct: 23 CGIADFFNKYRLTTDGELLEIEGLLQQATNSTGSIEYLIQHIKTIYPSEKQTLPQSIEQL 82
Query: 280 EETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKD 339
+ K++ + + ++ + + + E+ + + + I QL +
Sbjct: 83 TQKS---------------KKIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQK 127
Query: 340 REDLQQQIN 348
L+
Sbjct: 128 IAQLESHCQ 136
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 32.8 bits (74), Expect = 0.39
Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 19/75 (25%)
Query: 24 ELKDLLERERREMSQLEERQRQ-LSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQ 82
L++L + + E+ ++ L E + + E Q+EKN K +
Sbjct: 97 RLQELDAASKVMEQEWREKAKKDLEEWNQ--------RQSE--QVEKN--------KINN 138
Query: 83 RRADNESETKKKAEV 97
R AD + A++
Sbjct: 139 RIADKAFYQQPDADI 153
Score = 30.5 bits (68), Expect = 2.2
Identities = 11/92 (11%), Positives = 32/92 (34%), Gaps = 16/92 (17%)
Query: 382 SDLSVQTSEAAHLKA-REEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQL 440
+ T E ++ REEQ R + + + ++ + K+L++
Sbjct: 75 AQADRLTQEPESIRKWREEQ------RKRLQELDAASK----VMEQEWREKAKKDLEEW- 123
Query: 441 ETEQYFSTLYKTQAHELKEE---LDERSRNIL 469
++ + K + + + + +I+
Sbjct: 124 -NQRQSEQVEKNKINNRIADKAFYQQPDADII 154
Score = 29.7 bits (66), Expect = 3.7
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 11/82 (13%)
Query: 267 AAQAQYQQE---VRAHEETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSK--ESLLSN 321
A + QE +R E Q+ R+ + AS + +E ++ K + + + E + N
Sbjct: 75 AQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKN 134
Query: 322 GKE-REVDYKKSIDQLMKDRED 342
R D + +
Sbjct: 135 KINNRIAD-----KAFYQQPDA 151
Score = 29.4 bits (65), Expect = 5.7
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 1024 SSADVRKKEKEC----RKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQM 1079
+ AD +E E R+ Q++ QE + ++ ++E +E + +EE + Q+
Sbjct: 75 AQADRLTQEPESIRKWREEQRKRLQELDAASK---VMEQEWREKAKKDLEEWNQRQSEQV 131
Query: 1080 ELDSKDSEIEQ 1090
E + ++ I
Sbjct: 132 EKNKINNRIAD 142
Score = 29.0 bits (64), Expect = 6.7
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 27/95 (28%)
Query: 355 ELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAMLRE-AKR 413
L QE E + + +EQ K+ L+ + RE AK+
Sbjct: 79 RLTQEPESIRKWR----EEQRKR----------------LQELDAASKVMEQEWREKAKK 118
Query: 414 NIEEEYHKL-----KTKRSVEDLQMKELQDQLETE 443
++EE + K K + K Q + +
Sbjct: 119 DLEEWNQRQSEQVEKNKINNRIAD-KAFYQQPDAD 152
Score = 29.0 bits (64), Expect = 7.7
Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 14/79 (17%)
Query: 323 KEREVDYKKSIDQLMKDREDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQS 382
K RE + +K + + D + E R++ +K +Q + EQ +K + +
Sbjct: 89 KWRE-EQRKRLQE--LDAASKVME-------QEWREKAKKDLEEWNQRQSEQVEKNKINN 138
Query: 383 DLSVQTSEAAHLKAREEQL 401
+ ++ A + + +
Sbjct: 139 ----RIADKAFYQQPDADI 153
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen,
blood clotting; HET: NDG NAG; 2.70A {Gallus gallus}
SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Length = 464
Score = 33.4 bits (76), Expect = 0.53
Identities = 14/114 (12%), Positives = 36/114 (31%), Gaps = 2/114 (1%)
Query: 16 PNGGQANGELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILR 75
P G + L + + + L++R + S+ + + +++ + +K
Sbjct: 82 PTGCELQTTLLKQEKTVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDND 141
Query: 76 HDLKESQRRADNESETKKKAEVNL--QVISDMHEKLKTEAETATRLRKQSAELT 127
L E + K N + + + + + +L A T
Sbjct: 142 IILSEYNTEMELHYNYIKDNLDNNIPSSLRVLRAVIDSLHKKIQKLENAIATQT 195
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein),
struct genomics, PSI, protein structure initiative;
2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Length = 253
Score = 32.8 bits (74), Expect = 0.56
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Query: 782 PHADKFYAGFKSKHEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQ 841
P+ + R+ L + E+ + + + D KD ++Q
Sbjct: 54 PYFTNKVPQLVQQDTRDS------PVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQ 107
Query: 842 LQGKLAALGSETASL 856
LQG + A G E+ +
Sbjct: 108 LQGYVWAHGYESGQI 122
Score = 30.9 bits (69), Expect = 2.2
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 1056 CQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASL 1105
L + E+ + + + D KD ++QLQG + A G E+ +
Sbjct: 73 VSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAHGYESGQI 122
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1;
guanine nucleotide exchange factor, guanine-nucleotide
releasing factor, lipoprotein; 4.50A {Mus musculus}
Length = 279
Score = 32.6 bits (73), Expect = 0.66
Identities = 23/172 (13%), Positives = 61/172 (35%), Gaps = 10/172 (5%)
Query: 882 KQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPE-----LELKDLMAKHRSDLSSKES 936
++ R WK +V + + FY ++ + +++ + + + K+
Sbjct: 31 VESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPKKDF 90
Query: 937 L--LSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQ 994
+ LSN ++ + +++ I+ + E+ +L K ++
Sbjct: 91 VFCLSNSLGDAFLFQTTSQTELENW---ITAIHSACAAAVARHHHKEDTLRLLKSEIKKL 147
Query: 995 LLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKKEKECRKLQQELTQER 1046
K K+ ++ + + T K K + E+ + Q +L + R
Sbjct: 148 EQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRFR 199
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.5 bits (70), Expect = 0.77
Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 17/37 (45%)
Query: 168 ERSSKTQAVNLHKELEGRLQ----------ALNTELE 194
E+ QA+ K+L+ L+ A+ +E
Sbjct: 18 EK----QAL---KKLQASLKLYADDSAPALAIKATME 47
Score = 30.7 bits (68), Expect = 1.4
Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 7/37 (18%)
Query: 32 ERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLE 68
E++ + +L+ + L Y SA A++ +E
Sbjct: 18 EKQALKKLQASLK-L---YADDSAPALAIK---ATME 47
Score = 30.3 bits (67), Expect = 1.9
Identities = 7/27 (25%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 838 EIEQLQGKLAALGSETA-SLS-SADVE 862
+++LQ L ++A +L+ A +E
Sbjct: 21 ALKKLQASLKLYADDSAPALAIKATME 47
Score = 30.3 bits (67), Expect = 1.9
Identities = 7/27 (25%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 1087 EIEQLQGKLAALGSETA-SLS-SADVE 1111
+++LQ L ++A +L+ A +E
Sbjct: 21 ALKKLQASLKLYADDSAPALAIKATME 47
Score = 28.8 bits (63), Expect = 6.6
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 15/40 (37%)
Query: 882 KQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPELELK 921
KQ +K+ + +S K+ Y +D + P L +K
Sbjct: 19 KQALKK--------LQASLKL--Y--ADD---SAPALAIK 43
Score = 28.8 bits (63), Expect = 7.5
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 10/36 (27%)
Query: 981 EEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTT 1016
+ ++KL LK L + LA I T
Sbjct: 20 QALKKLQASLK---LYADDSAPALA-------IKAT 45
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1
PDB: 2tma_A 2w49_A 2w4u_A
Length = 284
Score = 32.3 bits (73), Expect = 0.80
Identities = 37/269 (13%), Positives = 101/269 (37%), Gaps = 5/269 (1%)
Query: 24 ELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQR 83
LK E + E ++ ++ + + +L+ ++ E L LK++Q
Sbjct: 10 MLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQE 69
Query: 84 RADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNI 143
+ + + AE ++ ++ +++ E R +++ A E+ E +
Sbjct: 70 KLELAEKKATDAEADVA---SLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERG 126
Query: 144 LATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQL 203
+ +E ++++ + ++ + + A ++E+ +L + ++LER + R
Sbjct: 127 MKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELS 186
Query: 204 AEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECASLSL 263
L E++ ++ L++L + E+ +E + E+ + L +K+ E
Sbjct: 187 EGKCAELEEEIKTVTNN--LKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAER 244
Query: 264 ELKAAQAQYQQEVRAHEETQKSRMVNKEE 292
+ + + EE
Sbjct: 245 SVTKLEKSIDDLEDELYAQKLKYKAISEE 273
Score = 31.5 bits (71), Expect = 1.6
Identities = 36/256 (14%), Positives = 94/256 (36%), Gaps = 2/256 (0%)
Query: 281 ETQKSRMVNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDR 340
E K ++ + + + L+ + +L L + +E+ +K D
Sbjct: 26 EADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATDAEADV 85
Query: 341 EDLQQQINLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQ 400
L ++I L +E EL + E+ T ++E+ + + + V S A + + E
Sbjct: 86 ASLNRRIQLFEE--ELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEI 143
Query: 401 LSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHELKEE 460
++ + + + +Y ++ K + + ++ +++ E + + + +
Sbjct: 144 QEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNN 203
Query: 461 LDERSRNILELEEERGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKELELKDL 520
L + ++ +++ + AE +V +LEK E EL
Sbjct: 204 LKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQ 263
Query: 521 MAKHRSDLSSKESLLS 536
K+++ + L+
Sbjct: 264 KLKYKAISEELDHALN 279
Score = 30.0 bits (67), Expect = 5.0
Identities = 23/215 (10%), Positives = 74/215 (34%)
Query: 354 AELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAMLREAKR 413
+ L+++ ++ + + + L+ +L + + ++ S + +E
Sbjct: 13 LDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLE 72
Query: 414 NIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHELKEELDERSRNILELEE 473
E++ + + + +++ +++L+ Q + E ++ DE R + +E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 474 ERGDLTHRLQLAVARADSEALARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSKES 533
++++ + A+ E+ ++ + E +L+ +
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAE 192
Query: 534 LLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 568
L K + K Q K + + +K
Sbjct: 193 LEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKV 227
Score = 29.2 bits (65), Expect = 9.0
Identities = 29/194 (14%), Positives = 73/194 (37%), Gaps = 3/194 (1%)
Query: 24 ELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQR 83
++ L+R + ++ ++ + + + + + E+ + I LKE++
Sbjct: 94 LFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKH 153
Query: 84 RADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVELQNI 143
A++ ++ L +I E+ + AE + + E + L+
Sbjct: 154 IAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEE---EIKTVTNNLKSLEAQ 210
Query: 144 LATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQL 203
+ D ++E+ L K+ + + A +LE + L EL K + +
Sbjct: 211 AEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAI 270
Query: 204 AEDNRHLGEKVSSL 217
+E+ H ++S+
Sbjct: 271 SEELDHALNDMTSI 284
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural
genomics, spectrin beta chain, brain 2, KIAA0302; NMR
{Homo sapiens} SCOP: b.55.1.1
Length = 123
Score = 31.1 bits (70), Expect = 0.85
Identities = 11/80 (13%), Positives = 21/80 (26%), Gaps = 10/80 (12%)
Query: 866 SYVQDSRLEGWVS-----IPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPE--- 917
S ++EG + + W+ Y V+ + FY P
Sbjct: 3 SGSSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGE 62
Query: 918 --LELKDLMAKHRSDLSSKE 935
+ L D ++
Sbjct: 63 VPVSLARAQGSVAFDYRKRK 82
>1yvl_A Signal transducer and activator of transcription 1-alpha/beta;
signaling protein; HET: PTR; 3.00A {Homo sapiens}
Length = 683
Score = 32.6 bits (73), Expect = 0.93
Identities = 17/143 (11%), Positives = 54/143 (37%), Gaps = 16/143 (11%)
Query: 960 EDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDINTTCKG 1019
D Q++++ ++ E K + L+ E K + + N
Sbjct: 136 LDKQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNREHETNG--------- 186
Query: 1020 KSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQM 1079
+ +D ++++ +K+ L +R++ +++ + Q+ ++ + + K +
Sbjct: 187 ---VAKSDQKQEQLLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEWKRRQ 243
Query: 1080 EL----DSKDSEIEQLQGKLAAL 1098
+ ++ ++QLQ +
Sbjct: 244 QSACIGGPPNACLDQLQNWFTIV 266
Score = 30.6 bits (68), Expect = 4.4
Identities = 27/177 (15%), Positives = 58/177 (32%), Gaps = 5/177 (2%)
Query: 20 QANGELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLK 79
+KD + E+ LE+ Q + + + + RE +K +L +
Sbjct: 144 SKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNREHETNGVAKSDQKQEQLLLKKMY 203
Query: 80 ESQRRADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQMVVE 139
E K +N+ L + + R+QSA + + +
Sbjct: 204 LMLDNKRKEVVHKIIELLNV--TELTQNALINDELVEWKRRQQSACIGGPP---NACLDQ 258
Query: 140 LQNILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERN 196
LQN + ++Q++ L+ + + L R +L +L ++
Sbjct: 259 LQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHDPITKNKQVLWDRTFSLFQQLIQS 315
Score = 29.9 bits (66), Expect = 5.8
Identities = 23/178 (12%), Positives = 50/178 (28%), Gaps = 9/178 (5%)
Query: 35 EMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILRHDLKESQRR-ADNESETKK 93
+ + + ++Q++L + V + + E+ LE K Q R + K
Sbjct: 131 QSTVMLDKQKELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQNREHETNGVAKS 190
Query: 94 KAEVNLQVISDMHEKLKTE--------AETATRLRKQSAELTVAKSAGEQMVVELQNILA 145
+ ++ M+ L + E L + + + I
Sbjct: 191 DQKQEQLLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEWKRRQQSACIGG 250
Query: 146 TLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHRELQL 203
D LQ + + Q R + L ++ + + R L
Sbjct: 251 PPNACLDQLQNWFTIVAESLQQVRQQLKKLEELEQKYTYEHDPITKNKQVLWDRTFSL 308
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 32.9 bits (75), Expect = 0.95
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 17 NGG-QANGELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTIL- 74
NGG Q ELK+ + R+E+ + E ++ +S E + + + I
Sbjct: 728 NGGLQFVPELKEFTAKLRKELVETSEVRKAVSI--ETALEHKVVNGNSADAAYAQVEIQP 785
Query: 75 RHDLKESQRRADNESETKKKAEVNLQVISDM 105
R +++ + K+ A L+ + D+
Sbjct: 786 RANIQLDFPELKPYKQVKQIAPAELEGLLDL 816
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21,
myristate, transport, nucleotide-binding, rhogap
protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP:
b.55.1.1 PDB: 2dhj_A
Length = 168
Score = 31.3 bits (70), Expect = 1.1
Identities = 10/76 (13%), Positives = 26/76 (34%), Gaps = 10/76 (13%)
Query: 870 DSRLEGWV-------SIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQ---NTDPELE 919
D+ EGW+ + WK+ YVV+ + Y + ++ + +
Sbjct: 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPIS 61
Query: 920 LKDLMAKHRSDLSSKE 935
+ + + ++
Sbjct: 62 VNACLIDISYSETKRK 77
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas
activation, metal-binding, phorbol-ester binding, SH2
domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Length = 463
Score = 32.2 bits (73), Expect = 1.1
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1180 KGHEFLNISYHMPTTCEVCPKPIWHIIRPPPALEC 1214
K H F ++ P CE C +W + ++C
Sbjct: 208 KIHNFKVHTFRGPHWCEYCANFMWGL--IAQGVKC 240
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain
cytoplasmic; motor protein, AAA+ protein, ASCE protein,
P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma
japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A
Length = 2695
Score = 32.5 bits (74), Expect = 1.1
Identities = 16/109 (14%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 953 DQLM-----KDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEI 1007
++ ++ ++Q++ +E+L K + E + K L +++LL+ ++ +
Sbjct: 2130 TRIFDITLTEENAEMQRK----REDLIKLNT---EYKLKLKNL-EKRLLEELNNSQGNML 2181
Query: 1008 MNRKDINTTCKGKSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKC 1056
N + + T K + ++ KK E + + E+++ +
Sbjct: 2182 ENDELMVTL--NNLKKEAMNIEKKLSESEEFFPQFDNLVEEYSIIGKHS 2228
>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein
S glycoprotein, hydrolase, metal-binding,
metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL
BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A*
3d67_A*
Length = 401
Score = 32.1 bits (73), Expect = 1.2
Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 19/139 (13%)
Query: 510 KTMKELE-LKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 568
+T ++++ L+++ ++ L + K EV + D+ L
Sbjct: 12 RTSRQVQILQNVTTTYKIVLWQPVAAEYIVKGYEVH-------FFVNASDVSNVKAHLNA 64
Query: 569 GKGAYGIVYKAYDKN-----NKQYVAIKKIFEAFRNKTDAQRTYREIL-FLKSF-QRHPN 621
I ++ +N +Q A + + + EI +++ +R+P+
Sbjct: 65 ----SRIPFRVLVENVEDLIRQQTSNDTISPRASSSYYEQYHSLNEIYSWIEVMTERYPD 120
Query: 622 IITMLDIYKAVNNKDLYVV 640
++ + I + LYV+
Sbjct: 121 MVEKIHIGSSYEKYPLYVL 139
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold,
C-terminal, A transthyretin-like domain, hydrolase; HET:
NAG GEM; 2.70A {Drosophila melanogaster}
Length = 435
Score = 32.2 bits (73), Expect = 1.2
Identities = 3/37 (8%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 606 TYREIL-FLKSF-QRHPNIITMLDIYKAVNNKDLYVV 640
+ ++ + +PN + + +++ ++L +
Sbjct: 42 SQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLAL 78
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease,
zinc, lipoprotein, hydrolase, structural proteomics in
europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP:
b.3.2.1 c.56.5.1
Length = 426
Score = 31.9 bits (72), Expect = 1.3
Identities = 9/37 (24%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 606 TYREIL-FLKSF-QRHPNIITMLDIYKAVNNKDLYVV 640
+ FLK+ Q + ++ + I K+V ++L+V+
Sbjct: 7 RQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVL 43
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding,
kinetoch replication-replication complex; 3.05A
{Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Length = 190
Score = 31.2 bits (70), Expect = 1.3
Identities = 14/76 (18%), Positives = 31/76 (40%)
Query: 798 EKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASLS 857
+ ++++ V L +LD+K +EI+QLQ ++ +L ++ L
Sbjct: 2 DPLTVYKNSVKQQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELK 61
Query: 858 SADVENDESYVQDSRL 873
+ + E+ L
Sbjct: 62 TQTSQQAENSEVIKDL 77
Score = 31.2 bits (70), Expect = 1.4
Identities = 13/69 (18%), Positives = 30/69 (43%)
Query: 1047 EKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASLS 1106
+ ++++ V L +LD+K +EI+QLQ ++ +L ++ L
Sbjct: 2 DPLTVYKNSVKQQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELK 61
Query: 1107 SADVENDES 1115
+ + E+
Sbjct: 62 TQTSQQAEN 70
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens}
SCOP: b.55.1.1
Length = 113
Score = 30.0 bits (68), Expect = 1.4
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQ 912
EG++ K+ + WK +VV+ I FY ++D
Sbjct: 8 EGYL---VKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNS 43
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 31.2 bits (70), Expect = 1.5
Identities = 8/31 (25%), Positives = 10/31 (32%), Gaps = 5/31 (16%)
Query: 1193 TTCEVCPKPIWHIIRPPPALE-----CGTVL 1218
TC C I+ + CG VL
Sbjct: 22 LTCPECKVYPPKIVERFSEGDVVCALCGLVL 52
>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens}
SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A
Length = 402
Score = 31.7 bits (72), Expect = 1.5
Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 26/141 (18%)
Query: 510 KTMKELE-LKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 568
+ + +++L + + D +S+ VD ED N+LK+
Sbjct: 18 EDENHINIIRELASTTQIDFWKPDSVTQIKPHSTVD-------FRVKAEDTVTVENVLKQ 70
Query: 569 GKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDAQR-------TYREIL-FLKSF-QRH 619
+ YK N + + F ++ A + I + + +
Sbjct: 71 ----NELQYKVLISN----LR-NVVEAQFDSRVRATGHSYEKYNKWETIEAWTQQVATEN 121
Query: 620 PNIITMLDIYKAVNNKDLYVV 640
P +I+ I + +Y++
Sbjct: 122 PALISRSVIGTTFEGRAIYLL 142
>1l0o_C Sigma factor; bergerat fold, helix-turn-helix, protein binding;
HET: ADP; 2.90A {Geobacillus stearothermophilus} SCOP:
a.4.13.2
Length = 243
Score = 31.4 bits (72), Expect = 1.5
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 8/81 (9%)
Query: 391 AAHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLY 450
A HL E +V + +EA R + D L DQ+ S
Sbjct: 137 ADHLGISPE----DVVLAQEAVR----LPTSIHETVYENDGDPITLLDQIADADEASWFD 188
Query: 451 KTQAHELKEELDERSRNILEL 471
K + EELDER R I+ L
Sbjct: 189 KIALKKAIEELDERERLIVYL 209
>1in0_A YAJQ protein, HI1034; alpha and beta sandwich, structural genomics,
structure 2 function project, S2F, unknown function;
2.14A {Haemophilus influenzae} SCOP: d.58.49.1 d.58.49.1
Length = 163
Score = 30.8 bits (69), Expect = 1.6
Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 18/126 (14%)
Query: 229 ELERNKHRELQLAEDNRHLGEKVSSLEKECASLSLELKAAQAQYQQEVRAHEETQKSRMV 288
EL E + L + + L C +E + + E +++ ++
Sbjct: 40 ELNEKNETIKITTESDFQLEQLIEILIGSCIKRGIEHSSLDIPAESEHHGKLYSKEIKLK 99
Query: 289 N--KEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQ 346
+ E + +I K +KD K ++ + G++ V K R+DLQ
Sbjct: 100 QGIETEMAKKITKLVKDSKIKVQTQI--------QGEQVRVTGKS--------RDDLQAV 143
Query: 347 INLLKE 352
I L+K
Sbjct: 144 IQLVKS 149
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent
protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta
specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Length = 380
Score = 31.7 bits (72), Expect = 1.6
Identities = 9/37 (24%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 606 TYREIL-FLKSF-QRHPNIITMLDIYKAVNNKDLYVV 640
+ ++ FL+ + +P+I + + K+V ++LYV+
Sbjct: 12 HFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVM 48
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens}
Length = 115
Score = 30.1 bits (68), Expect = 1.6
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQ 912
+G++ K+ +R W +++ V+ I +Y SE+ K
Sbjct: 11 QGYMM---KKGHRRKNWTERWFVLKPNIISYYVSEDLKD 46
>1b75_A Protein (50S ribosomal protein L25); RNA-binding protein, RNA binding
protein; NMR {Escherichia coli} SCOP: b.53.1.1 PDB:
1d6k_A 1dfu_P 1giy_V 1ml5_v* 1p85_T 1p86_T 1vs6_V 1vs8_V
1vt2_V 2aw4_V 2awb_V 2gya_T 2gyc_T 2i2t_V 2i2v_V 2j28_V
2qam_V* 2qao_V* 2qba_V* 2qbc_V* ...
Length = 94
Score = 29.5 bits (67), Expect = 1.6
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 1149 GEGEARRPEDGGAELPAVLRGGDEKPGIIALKGHEFLNISYH 1190
G+G +RR + PA++ GG E P I L + +N+
Sbjct: 13 GKGASRRLRAAN-KFPAIIYGGKEAPLAIELDHDKVMNMQAK 53
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology,
lipid transport; NMR {Homo sapiens}
Length = 94
Score = 29.3 bits (66), Expect = 1.7
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 873 LEGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNT 914
G +S K HGW+ ++VV+ + + +Y SE++ +
Sbjct: 3 RCGVLS---KWTNYIHGWQDRWVVLKNNALSYYKSEDETEYG 41
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc
peptidase, transthyretin-like domain, processing,
peptide modification, hydrolase; HET: NAG; 2.10A {Homo
sapiens}
Length = 439
Score = 31.5 bits (71), Expect = 1.9
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 606 TYREIL-FLKSF-QRHPNIITMLDIYKAVNNKDLYVV 640
Y +++ L P I + I ++V + LYV+
Sbjct: 8 RYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVL 44
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 137
Score = 30.0 bits (67), Expect = 2.0
Identities = 7/42 (16%), Positives = 20/42 (47%)
Query: 873 LEGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNT 914
L+ + I + + G+++ +VV + +Y S+++
Sbjct: 11 LKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGD 52
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel
inter domain, chaperone; 3.94A {Mycobacterium
tuberculosis} PDB: 3m9d_A
Length = 251
Score = 30.9 bits (69), Expect = 2.2
Identities = 12/81 (14%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 1020 KSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQM 1079
S +A++ + +E L+++L + + +++ +L++++ KL
Sbjct: 18 LSSGDAAELEQLRREAAVLREQLENAVG--SHAPTRSARDIHQLEARIDSLAARNSKLME 75
Query: 1080 ELDSKDSEIEQLQGKLAALGS 1100
L ++ L+ ++ LG
Sbjct: 76 TLKEARQQLLALREEVDRLGQ 96
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin
activation, cytoplas membrane, cell adhesion; HET: SRT;
1.90A {Homo sapiens} PDB: 2lko_A*
Length = 173
Score = 30.1 bits (67), Expect = 2.5
Identities = 14/92 (15%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 823 TSKLKLQMELDSKDSEIEQLQGKLAALGSETASLSSADVENDESYVQDSRLEGWVSIPNK 882
+S + + L++ D E++++ L+ L ++ + D + + + L ++ +
Sbjct: 1 SSIMTSENHLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIPE--LADYIKVFKP 58
Query: 883 QNIKRHGWKKQYVVVSSKKIIFYNSENDKQNT 914
+ + G+K+ + I Y S+ + T
Sbjct: 59 KKLTLKGYKQYWCTFKDTSISCYKSKEESSGT 90
>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding,
SH2 domain, transcription REGU signaling protein; 3.21A
{Mus musculus}
Length = 585
Score = 31.3 bits (70), Expect = 2.6
Identities = 27/148 (18%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 960 EDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQ---LLKAQAVNKLAEIMNRKDINTT 1016
QIN EELR +++ E K+L+Q Q +++ Q ++ +
Sbjct: 11 SQKHLQINQRFEELR---LITQDTENELKKLQQTQEYFIIQYQESLRIQAQFAQLGQLNP 67
Query: 1017 CKGKSKASSADVRKKEKE--CRKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSK 1074
+ S+ ++ ++ E ++ Q L Q R + + K + L++ Q+ ++++ +
Sbjct: 68 QERMSRETALQQKQVSLETWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTIILDDELIQ 127
Query: 1075 LKLQMELDS----KDSEIEQLQGKLAAL 1098
K + +L + ++ LQ L
Sbjct: 128 WKRRQQLAGNGGPPEGSLDVLQSWCEKL 155
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain,
phosphatidylinositol binding, structural genomics; NMR
{Homo sapiens} SCOP: b.55.1.1
Length = 118
Score = 29.3 bits (66), Expect = 2.6
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQ 912
GW+ KQ W+++Y V+ ++++ +Y E D +
Sbjct: 11 MGWLK---KQRSIVKNWQQRYFVLRAQQLYYYKDEEDTK 46
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH
domain, phret1, structural genomics, NPPSFA; NMR {Mus
musculus}
Length = 130
Score = 29.6 bits (66), Expect = 2.6
Identities = 9/72 (12%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPELELKDLMAKHRSDLSS 933
GW+ +Q+ WK+ + + + Y + Q+ + + + + +
Sbjct: 11 GGWLW---RQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQEC 67
Query: 934 KESLLSNGKERE 945
++ G+ R+
Sbjct: 68 QDVQPPEGRSRD 79
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4;
pleckstrin homoloy domain, signal transduction,
structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Length = 109
Score = 29.3 bits (66), Expect = 2.7
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 870 DSRLEGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQ 912
S + G++ + + WK + V+ +K + Y + D
Sbjct: 7 GSTMSGYLY---RSKGSKKPWKHLWFVIKNKVLYTYAASEDVA 46
>3u06_A Protein claret segregational; motor domain, stalk rotation, power
stroke, kinesin-14, MICR binding, NCD, transport,
molecular motor; HET: ADP GOL; 2.35A {Drosophila
melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Length = 412
Score = 30.7 bits (70), Expect = 3.1
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 380 LQSDLSVQTSEAAHLKAREEQLSHEVAMLREAKRNIEEEYHKLKTKR 426
+ S + ++E HL+ R E+L +E+ + +R
Sbjct: 1 MGSMHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMER 47
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus}
SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A*
1u29_A* 1u27_A*
Length = 127
Score = 29.6 bits (66), Expect = 3.1
Identities = 8/39 (20%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQ 912
EGW+ K + WK+++ +++ + ++ DK+
Sbjct: 8 EGWLL---KLGGRVKTWKRRWFILTDNCLYYFEYTTDKE 43
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
SCOP: b.55.1.1
Length = 149
Score = 29.7 bits (66), Expect = 3.2
Identities = 21/134 (15%), Positives = 53/134 (39%), Gaps = 15/134 (11%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPELELKDLMAKHRSDLSS 933
EG++ + ++ + + + FY + D +L++ DL + L+
Sbjct: 21 EGFLL---IKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVD-KLDIVDL-----TCLTE 71
Query: 934 KESLLSNGKEREVDYKKSIDQLM-KDREDLQQQINLLKEELRKSSNSSE-----EMEKLH 987
+ S N + + K QL ++ E ++ + S + ++ KLH
Sbjct: 72 QNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTELSVPQNVSLLPGQVIKLH 131
Query: 988 KQLKQEQLLKAQAV 1001
+ L++E+ + ++
Sbjct: 132 EVLEREKKRRIESG 145
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP:
b.55.1.1
Length = 122
Score = 29.2 bits (65), Expect = 3.2
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
Query: 866 SYVQDSRLEGWVS-----IPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQ-------N 913
EG+V+ + W K Y+ + +I FY + +
Sbjct: 3 GTGAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFR 62
Query: 914 TDPELELKDLMAKHRSDLSSKE 935
+P +L++ + SD + K+
Sbjct: 63 GEPSYDLQNAAIEIASDYTKKK 84
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex,
blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A
{Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB:
1n73_C*
Length = 323
Score = 30.5 bits (69), Expect = 3.5
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
Query: 806 KCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASLSS 858
QK +Q++ +V L+ S D++I++L L
Sbjct: 2 SGQKTVQKILEEV-------RILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQ 47
Score = 30.5 bits (69), Expect = 3.5
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
Query: 1055 KCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASLSS 1107
QK +Q++ +V L+ S D++I++L L
Sbjct: 2 SGQKTVQKILEEV-------RILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQ 47
Score = 29.4 bits (66), Expect = 7.6
Identities = 11/57 (19%), Positives = 21/57 (36%)
Query: 1036 RKLQQELTQEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQ 1092
+K Q++ +E Q+ V ++QEL +LQ +L +
Sbjct: 4 QKTVQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTCSRPC 60
Score = 29.0 bits (65), Expect = 9.1
Identities = 7/61 (11%), Positives = 29/61 (47%)
Query: 949 KKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIM 1008
+K++ +++++ L+Q ++++ S ++ +L+Q+ + Q ++ +
Sbjct: 4 QKTVQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTCSRPCQDT 63
Query: 1009 N 1009
Sbjct: 64 T 64
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural
genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo
sapiens} SCOP: b.55.1.1
Length = 107
Score = 28.7 bits (64), Expect = 3.7
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 5/48 (10%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPELELK 921
++ N WK ++ V + FY N + L L
Sbjct: 11 SSYL---NVL--VNSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLV 53
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface
adhesin WALL, peptidoglycan-anchor, cell adhesion; HET:
PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Length = 497
Score = 30.6 bits (67), Expect = 3.8
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 4/119 (3%)
Query: 485 AVARADSEALARSIAEETVGELEKEKTMKELELKDLMAKHRSDLSSKESLLSNGKEREVD 544
A AD +A + E + ++K + + +A + + ++ + + K+R D
Sbjct: 1 AANEADYQAKLTAYQTE-LARVQKANADAKAAYEAAVAANNAANAALTAENTAIKKRNAD 59
Query: 545 YKKSIDQLMKDREDLQQQINLLKEGKGAYGIVYKAYDKNNKQYVAIKKIFEAFRNKTDA 603
K + + + + + Y + KAY+ A E +N+
Sbjct: 60 AKADYEAKLAKYQADLAKYQ---KDLADYPVKLKAYEDEQTSIKAALAELEKHKNEDGN 115
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid
degradation, phosphatidylinositol (3, 4)-bisphosphate,
signalling; HET: CIT; 1.40A {Homo sapiens} SCOP:
b.55.1.1
Length = 125
Score = 29.0 bits (65), Expect = 4.5
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 874 EGWVSIPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQ 912
G+ KQ WK++Y + I ++ SE +K+
Sbjct: 17 AGYCV---KQGAVMKNWKRRYFQLDENTIGYFKSELEKE 52
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET:
FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2
d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A*
1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A*
1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A*
1phh_A* ...
Length = 394
Score = 30.0 bits (68), Expect = 4.9
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 467 NILELEEERGDLTHRLQLAVAR--ADSEALARSIAEETVG 504
++L + + R+Q SEA +IAE VG
Sbjct: 348 SVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYVG 387
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase,
AARS, serrs, translation, ATP-binding,
nucleotide-binding, structural genomics; HET: ATP; 1.95A
{Trypanosoma brucei} PDB: 3lsq_A*
Length = 484
Score = 30.0 bits (68), Expect = 5.3
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 23/130 (17%)
Query: 293 ASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQINLLKE 352
A +IV + + K R E+ K++ K +E + +
Sbjct: 31 ADPDIVDAIIEADKKWRRTQFLTEASKKLINICS----KAVGAKKKAKEADGDTSEIPPQ 86
Query: 353 GAELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAMLREAK 412
E + V+ LK + LS +VA L +
Sbjct: 87 VKEAYENGTLKGE-------------------QVEQLCVLQLKQLSKDLSDQVAGLAKEA 127
Query: 413 RNIEEEYHKL 422
+ +EEE KL
Sbjct: 128 QQLEEERDKL 137
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin
binding, masking, regulation, SELF-inhibition, cell A
membrane protein; 2.10A {Spodoptera frugiperda} PDB:
2i1k_A 1e5w_A
Length = 575
Score = 29.9 bits (66), Expect = 5.6
Identities = 30/195 (15%), Positives = 77/195 (39%), Gaps = 7/195 (3%)
Query: 954 QLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIMNRKDI 1013
Q +++ Q Q L+ E+ + ++ ++ +L+Q Q ++ L E +
Sbjct: 308 QAREEKLAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQANLLEAQDMILR 367
Query: 1014 NTTCKGKSKASSADVRKKEKECRKLQQELTQ-------EREKFNQVVVKCQKELQELQSQ 1066
+ +A+ ++ +++ E + + Q L + ER+K + Q+E+ +Q +
Sbjct: 368 LEEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAKQEEVSRIQQE 427
Query: 1067 VVEENTSKLKLQMELDSKDSEIEQLQGKLAALGSETASLSSADVENDESYVQDEVRSRSV 1126
V +++ +LQ E++ + ++ L A + + + D +
Sbjct: 428 VELKDSETRRLQEEVEDARRKQDEAAAALLAATTPQHHHVAERADTDPDHDNASDAGSES 487
Query: 1127 TQGDVIRADAKDIPR 1141
GD+ R +
Sbjct: 488 GGGDLARGPDDLVDP 502
>1s94_A S-syntaxin; three helix bundle, structural plasticity,
endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP:
a.47.2.1
Length = 180
Score = 29.3 bits (65), Expect = 6.2
Identities = 17/114 (14%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 949 KKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQLLKAQAVNKLAEIM 1008
+ ID++ + + ++++ + + + EE+E+L +K+ NK+ +
Sbjct: 49 RAMIDKISDNVDAVKKKHSDILSAPQTDDQMKEELEELMTDIKRT-------ANKVRGKL 101
Query: 1009 NRKDINTTCKGKSKASSADVRKKEKECRKLQQELTQEREKFNQVVVKCQKELQE 1062
++N + S SSAD+R ++ + + ++ + +N + + +
Sbjct: 102 KTIELNIEQEEHSNKSSADLRIRKTQYSTISRKFVEVMSDYNTTQIDYRDRCKA 155
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Length = 526
Score = 29.9 bits (67), Expect = 6.5
Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 13/160 (8%)
Query: 140 LQNILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTELERNKHR 199
L N+L + E D L +QAK+ + + + K + + ELE +
Sbjct: 74 LLNVLGSGEEIPDPLSPGERGIQAKLKELEDEQRNELVRLKYNDKIKEKFGKELEEVYNF 133
Query: 200 ELQLAEDNRHLGEKVSSLEKECRLQALNTELERNKHRELQLAEDNRHLGEKVSSLEKECA 259
A ++ L K A+ + + +LQ+ +L+KE
Sbjct: 134 MNGEANAEIEDEKQFDILNK-----AVTSYNKILTEEDLQMRRLAT-------ALQKEIG 181
Query: 260 SLSLELKAAQAQYQQEVRA-HEETQKSRMVNKEEASVEIV 298
+ +Y+ ++ A + R +EEA EI
Sbjct: 182 ERTHAETVMVKEYRDKIDALKNAIEVERDGMQEEAIQEIA 221
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain,
transcription, RNA binding protein; 2.27A {Pseudomonas
aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5
c.55.3.13 PDB: 3bzk_A 2oce_A
Length = 785
Score = 29.9 bits (68), Expect = 6.6
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 15/62 (24%)
Query: 430 DLQMKELQDQLETEQYFSTLYKTQAHELKEELDERSRNILELEEERGDLTHRLQLAVARA 489
D Q++ L+++L +Y EL+ER IL EE+G LT L + A
Sbjct: 54 DTQLRMLEERL---RYL------------RELEERRGAILASIEEQGKLTPELARDIKLA 98
Query: 490 DS 491
D+
Sbjct: 99 DT 100
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC
domain, vesicle trafficking, membrane curvature,
endocytosis, exocytosis, F-BAR domain; 2.30A {Homo
sapiens}
Length = 276
Score = 29.3 bits (65), Expect = 6.8
Identities = 24/182 (13%), Positives = 59/182 (32%), Gaps = 1/182 (0%)
Query: 16 PNGGQANGELKDLLERERREMSQLEERQRQLSEQYEAVSARETALRDEMGQLEKNLTILR 75
+ G + + + +L L + + + +E + K
Sbjct: 62 ASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEV 121
Query: 76 HDLKESQRRADNESETKKKAEVNLQVISDMHEKLKTEAETATRLRKQSAELTVAKSAGEQ 135
E+ + + ++ +K++ N E+LK E T + K + + A +
Sbjct: 122 AGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKL 181
Query: 136 MVVELQNILATLEMERDTLQQEVATL-QAKISQERSSKTQAVNLHKELEGRLQALNTELE 194
V + A E + Q+ + + + + N KE+ ++ ++ E
Sbjct: 182 YVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFI 241
Query: 195 RN 196
N
Sbjct: 242 NN 243
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Length = 501
Score = 29.5 bits (67), Expect = 8.1
Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 14/101 (13%)
Query: 133 GEQMVVELQNILATLEMERDTLQQEVATLQAKISQERSSKTQAVNLHKELEGRLQALNTE 192
++ + + + E L++++ +L+ E+ + T+AV L
Sbjct: 61 KGELRSKDLPGIISTWQELRQLREQIRSLEE----EKEAVTEAV-------RALVVNQDN 109
Query: 193 LERNKHRELQ-LAEDNRHLGEKVSSLEKECRLQALNTELER 232
+ + + Q L R + ++++ L + L +
Sbjct: 110 SQVQQDPQYQSLRARGREIRKQLTLLYPK--EAQLEEQFYL 148
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus
musculus} SCOP: b.55.1.1 PDB: 1mph_A
Length = 106
Score = 27.6 bits (61), Expect = 8.3
Identities = 7/46 (15%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 873 LEGWVS-----IPNKQNIKRHGWKKQYVVVSSKKIIFYNSENDKQN 913
+EG+++ + + W Y V++++++ FY +
Sbjct: 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAAS 46
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH
domain, signaling protein; 2.60A {Mus musculus} SCOP:
b.55.1.1 PDB: 2otx_A
Length = 211
Score = 28.9 bits (64), Expect = 8.4
Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 7/122 (5%)
Query: 792 KSKHEREKFNQVVVKCQKELQELQSQVVEENTSKLKLQMELDSKDSEIEQLQGKLAALGS 851
K + +K V LQE Q + E+ + + + ++ L +
Sbjct: 33 KRESLIKKIKDV---KSVYLQEFQDKGDAEDGDEYD---DPFAGPADTISLASERYDKDD 86
Query: 852 ETASLSSADVENDESYVQDSRLEGWVS-IPNKQNIKRHGWKKQYVVVSSKKIIFYNSEND 910
+ S + + G++ + W+K++ +S +Y S+ D
Sbjct: 87 DGPSDGNQFPPIAAQDLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD 146
Query: 911 KQ 912
KQ
Sbjct: 147 KQ 148
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 427
Score = 29.3 bits (65), Expect = 8.6
Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 3/125 (2%)
Query: 50 YEAVSARETALRDEMGQLEKNLTILRHDLKESQRRADNESETKKKAEVNLQVISDMHEKL 109
YE + + + E++R KK+ E+ + + EK
Sbjct: 295 YELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKE 354
Query: 110 KTEAETATRLRKQSAELTVAKSAGEQMVVELQNILATLEMERDTLQQEVATLQAKISQER 169
E L ++ L K + +L++ +L+ E + +Q + SQ
Sbjct: 355 AELKEAEKELHEKFDRL---KKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGS 411
Query: 170 SSKTQ 174
+
Sbjct: 412 QAGGS 416
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine
nucleotide exchange factor, alternative splicing, cell
projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Length = 263
Score = 29.2 bits (64), Expect = 9.0
Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 10/172 (5%)
Query: 882 KQNIKRHGWKKQYVVVSSKKIIFYNSENDKQNTDPE-----LELKDLMAKHRSDLSSKES 936
+ + R WK+ +V + ++FY + L +D + + + KE
Sbjct: 31 LELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPKKEH 90
Query: 937 L--LSNGKEREVDYKKSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQ 994
+ LSN ++ + + E+ I+ L + E+ +L K +
Sbjct: 91 VFCLSNSCGDVYLFQATSQTDL---ENWVTAIHSACASLFAKKHGKEDTVRLLKSQTRSL 147
Query: 995 LLKAQAVNKLAEIMNRKDINTTCKGKSKASSADVRKKEKECRKLQQELTQER 1046
L K +K+ ++ + + KA +R+ E+ K +L + R
Sbjct: 148 LQKIDMDSKMKKMAELQLSVVSDPKNRKAIENQIRQWEQNLEKFHMDLFRMR 199
>4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A
{Helicobacter pylori}
Length = 877
Score = 29.5 bits (65), Expect = 9.8
Identities = 34/284 (11%), Positives = 94/284 (33%), Gaps = 12/284 (4%)
Query: 288 VNKEEASVEIVKELKDLMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQI 347
+N + + + L++ + L L+ + + K + +
Sbjct: 548 LNNLAITSFVRRNLENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAVAEAKSTG 607
Query: 348 NLLKEGAELRQELEKSKTLQSQVEQEQAKKFSLQSDLSVQTSEAAHLKAREEQLSHEVAM 407
N E + +++LEKS + +E+E KK +S + A ++++++ +
Sbjct: 608 NY-DEVKKAQKDLEKSLRKREHLEKEVEKKLESKSGNKNKMEAKAQANSQKDEIFALINK 666
Query: 408 LREAKRNIEEEYHKLKTKRSVEDLQMKELQDQLETEQYFSTLYKTQAHELKEELDERSRN 467
LK + +++++ L+ +K ++ +
Sbjct: 667 EANRDARAIAYTQNLKGIKRELSDKLEKISKDLKDFSKSFDEFKNG---KNKDFSKAEET 723
Query: 468 ILELEEERGDLTHRLQLAVARAD--------SEALARSIAEETVGELEKEKTMKELELKD 519
+ L+ DL + + + ++ T + + E ++K++ +
Sbjct: 724 LKALKGSVKDLGINPEWISKVENLNAALNEFKNGKNKDFSKVTQAKSDLENSVKDVIINQ 783
Query: 520 LMAKHRSDLSSKESLLSNGKEREVDYKKSIDQLMKDREDLQQQI 563
+ +L+ S+ + + D +E L QQ
Sbjct: 784 KVTDKVDNLNQAVSVAKAMGDFSRVEQVLADLKNFSKEQLAQQA 827
>3g8l_A Lectin-related NK cell receptor LY49L1; natural killer cell
receptor, immune system; 2.50A {Mus musculus}
Length = 190
Score = 28.7 bits (64), Expect = 9.9
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 950 KSIDQLMKDREDLQQQINLLKEELRKSSNSSEEMEKLHKQLKQEQ 994
S++ K Q INL E L +S L + L +EQ
Sbjct: 2 ASLNCHDKCSTTTQSDINLKDELLSSTSIECRPGNDLLESLHKEQ 46
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.311 0.127 0.337
Gapped
Lambda K H
0.267 0.0364 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 17,103,117
Number of extensions: 1046060
Number of successful extensions: 5467
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3995
Number of HSP's successfully gapped: 1064
Length of query: 1219
Length of database: 6,701,793
Length adjustment: 104
Effective length of query: 1115
Effective length of database: 3,798,009
Effective search space: 4234780035
Effective search space used: 4234780035
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (29.0 bits)