BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14432
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193580079|ref|XP_001952371.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Acyrthosiphon pisum]
Length = 191
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 123/175 (70%), Gaps = 25/175 (14%)
Query: 15 RNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIP 74
R + + Y S+ISL L+P SS+ + TP+P+Q+ D F G IP
Sbjct: 14 RTLSRSNYTSAISLKNLHPKSSLKITTPSPEQL----------------ADNKIFTGYIP 57
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V EEL+ITYS SSGPGGQ+VN V+TKVD+RFKV +A WLNE+++++LI +N+
Sbjct: 58 V---------EELEITYSTSSGPGGQNVNKVNTKVDLRFKVESAQWLNEEIRQKLININQ 108
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
N+L K+GYL+I+S++TRSQQLNLADA+ LR+++WKAA+P P+ SE++I++IR R
Sbjct: 109 NKLTKEGYLVIRSEKTRSQQLNLADAIERLRSLVWKAAEPEPKQSEESIEKIRRR 163
>gi|380016742|ref|XP_003692333.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Apis
florea]
Length = 198
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 111/165 (67%), Gaps = 29/165 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPT--PDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPR 79
YKS+ SLDKLYP ++ L TPT P+ A KF+G IP+K
Sbjct: 28 YKSAYSLDKLYPTHNIKLFTPTFVPEDPNA----KFSGYIPIK----------------- 66
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
ELDITYSRSSG GGQHVN +TKVD+RF + +A WL+E++K +L+E KN+L+K
Sbjct: 67 ------ELDITYSRSSGAGGQHVNRTNTKVDVRFHLQSAKWLSEEIKSKLLEQYKNKLSK 120
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTID 184
+GY IIKS+ TRSQQLNLADA+ LR++IW+A KP P+IS +T++
Sbjct: 121 EGYFIIKSELTRSQQLNLADALRKLRDIIWEATKPPPEISSETLE 165
>gi|66520744|ref|XP_393856.2| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Apis
mellifera]
Length = 198
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 110/168 (65%), Gaps = 29/168 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPT--PDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPR 79
YKS+ SLDKLYP S+ L TPT P+ A KF+G IP+K
Sbjct: 28 YKSAYSLDKLYPTHSIKLFTPTFVPEDPNA----KFSGYIPIK----------------- 66
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
EL+ITYSRSSG GGQHVN ++KVDIRF + +A WL+E++K +L+E KN+L+K
Sbjct: 67 ------ELNITYSRSSGAGGQHVNCTNSKVDIRFHLQSAKWLSEEIKSKLLEQYKNKLSK 120
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
+GYLIIKS+ TRSQQLNLADA+ LR IW+A KP P+ S +T++ R
Sbjct: 121 EGYLIIKSELTRSQQLNLADALRKLRETIWEATKPPPETSPETLELKR 168
>gi|170041675|ref|XP_001848580.1| immature colon carcinoma [Culex quinquefasciatus]
gi|167865240|gb|EDS28623.1| immature colon carcinoma [Culex quinquefasciatus]
Length = 200
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 119/177 (67%), Gaps = 29/177 (16%)
Query: 16 NVVKRFY--KSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVI 73
+V++R Y KS +SLDK+YP+S++ L TP P Q + D KF+G I
Sbjct: 23 HVLRRNYSFKSDLSLDKIYPSSNLRLYTPPPPQ----------------STDS-KFSGFI 65
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P+ ++L++TYSRSSGPGGQ+VN+VSTKVDIRFK+ AA+WL E +K+L EL
Sbjct: 66 PL---------DKLEVTYSRSSGPGGQNVNTVSTKVDIRFKLEAADWLPEATRKRLAELQ 116
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP-QISEDTIDRIRIR 189
K RL KDGYLIIKS+ TRSQQ+N+ADA+ LR I +A KP ++S +T +++R R
Sbjct: 117 KGRLTKDGYLIIKSELTRSQQMNMADALEKLRTFIREAEKPTTVELSPETAEKLRRR 173
>gi|263173423|gb|ACY69938.1| putative peptidyl-tRNA hydrolase [Cimex lectularius]
Length = 189
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 116/179 (64%), Gaps = 28/179 (15%)
Query: 11 ISNQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFN 70
+ N RN+ YKS+ISL LYP SS+ TP V PD +G F+
Sbjct: 13 LPNTRNL--SLYKSNISLSNLYPKSSLNFTTP----VSIPD-------------NGSAFS 53
Query: 71 GVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLI 130
G IPV +++DITYSRSSGPGGQHVN+V+TKVD+RF V +A WL++DVKK+++
Sbjct: 54 GFIPV---------DKVDITYSRSSGPGGQHVNTVNTKVDVRFHVESAEWLSDDVKKRIL 104
Query: 131 ELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
E KN++NKDGYL+++SD+TRSQ N ADAM LR +I A P I+++T++ +R R
Sbjct: 105 ENLKNKINKDGYLVVRSDKTRSQIYNQADAMMILRRLIHSALVTKPAITQETLEVLRKR 163
>gi|158296668|ref|XP_317020.4| AGAP008425-PA [Anopheles gambiae str. PEST]
gi|157014821|gb|EAA12662.4| AGAP008425-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 112/169 (66%), Gaps = 26/169 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS ++L+ +YPNSS+ L TP P P +PDG FNG IP+
Sbjct: 33 YKSDLALETIYPNSSLRLYTPPP---------------PAVSPDGT-FNGYIPL------ 70
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
E+L I+YSRSSGPGGQ+VN+VSTKVD+RF + A WL E+ + +L +L+K R+ KDG
Sbjct: 71 ---EKLTISYSRSSGPGGQNVNTVSTKVDLRFHLETATWLPENTRNRLAQLHKGRITKDG 127
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP-APQISEDTIDRIRIR 189
YL+IKS+ TRSQQ+N ADA+ LR I +A +P + + SE+T++++R R
Sbjct: 128 YLVIKSELTRSQQMNTADALEKLRTFIRQAERPVSAEPSEETVEKLRRR 176
>gi|195035783|ref|XP_001989351.1| GH11680 [Drosophila grimshawi]
gi|193905351|gb|EDW04218.1| GH11680 [Drosophila grimshawi]
Length = 203
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 108/168 (64%), Gaps = 25/168 (14%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SL+K+YPN+ + L TP P P + DG KFNG IP+
Sbjct: 31 YKSDLSLEKIYPNARLQLYTPPP---------------PAASSDG-KFNGYIPM------ 68
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++LDITYSRSSGPGGQHVN+V+TKVD+RFK+ A W+ E +++L+++ N+LNK+G
Sbjct: 69 ---DKLDITYSRSSGPGGQHVNTVNTKVDVRFKLAEAQWIPEKTRQKLLQVLANKLNKEG 125
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQLNLADA+ LR +I SE T++++R R
Sbjct: 126 YFFIKSDLTRSQQLNLADALEKLRTLIRAQEVEPVGPSEQTLEKLRRR 173
>gi|383860211|ref|XP_003705584.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Megachile rotundata]
Length = 200
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 115/178 (64%), Gaps = 26/178 (14%)
Query: 11 ISNQRNVVKRF-YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKF 69
N N+ K F YKS+ +LD LYP S++ L +PT + PD +F
Sbjct: 18 CQNVYNIGKAFVYKSAFALDNLYPTSNLKLYSPT---------------FTPENPDS-QF 61
Query: 70 NGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQL 129
NG IP+ EL I YSRSSGPGGQHVN ++KV++RF V +A WL++++K++L
Sbjct: 62 NGYIPM---------NELQIRYSRSSGPGGQHVNCTNSKVNVRFHVVSAKWLSDEIKEKL 112
Query: 130 IELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
++L+ NR+ KDGYL+IKS+ T+SQQLNLADA+ LR +IW + KP P++S +T++ R
Sbjct: 113 LKLHHNRITKDGYLVIKSEITKSQQLNLADALGKLRMLIWDSIKPLPEVSAETMEAKR 170
>gi|357625789|gb|EHJ76109.1| putative beta-keto adipate succinyl CoA transferase [Danaus
plexippus]
Length = 200
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 110/170 (64%), Gaps = 30/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTP--TPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPR 79
YKSS+SL+ LYPNSS+ L TP TPD + KF+G IP+
Sbjct: 29 YKSSLSLETLYPNSSLKLSTPAFTPDPKE-------------------KFSGYIPM---- 65
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
++LDI YS SSGPGGQ+VN V TKVD+RFKVN A+W+ +++++L EL+ N+L K
Sbjct: 66 -----DKLDIKYSASSGPGGQNVNKVHTKVDLRFKVNEADWIPAEIREKLQELHNNKLTK 120
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
+GYL+I+SD TRSQQLNLAD + LRNMI AA + S +T +RIR R
Sbjct: 121 EGYLVIRSDVTRSQQLNLADCLQKLRNMIRDAAVTKREPSPETEERIRQR 170
>gi|157125949|ref|XP_001654462.1| orf 140; significant similarity to ORF next to beta-keto adipate
succinyl CoA transferase from P. putida, putative [Aedes
aegypti]
gi|108873472|gb|EAT37697.1| AAEL010339-PA [Aedes aegypti]
Length = 200
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 116/177 (65%), Gaps = 29/177 (16%)
Query: 16 NVVKRFY--KSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVI 73
+V++R Y KS +SLDK+YP+S++ L TP P G KF G I
Sbjct: 23 HVLRRNYSFKSDLSLDKIYPSSNLRLYTPPPPHA-----------------TGDKFTGFI 65
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P+ ++L+IT+SRSSGPGGQ+VN+VSTKVDIRF + +ANWL+E +K+L EL+
Sbjct: 66 PL---------DKLEITHSRSSGPGGQNVNTVSTKVDIRFHLESANWLSEATRKRLAELH 116
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP-APQISEDTIDRIRIR 189
KNR+ KDGYL ++S+ TRSQQ+N ADA+ LRN I +A P + ++S +T + +R R
Sbjct: 117 KNRITKDGYLFVRSELTRSQQMNTADALEKLRNFIRQAEIPVSAEMSPETQEMLRRR 173
>gi|223968163|emb|CAR93812.1| CG6094-PA [Drosophila melanogaster]
Length = 203
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVAQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A PAP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVAPAPP-SEETLEKLRRR 173
>gi|19921098|ref|NP_609416.1| CG6094, isoform A [Drosophila melanogaster]
gi|442627343|ref|NP_001260353.1| CG6094, isoform B [Drosophila melanogaster]
gi|7297716|gb|AAF52967.1| CG6094, isoform A [Drosophila melanogaster]
gi|16768252|gb|AAL28345.1| GH26345p [Drosophila melanogaster]
gi|116806616|emb|CAL26734.1| CG6094 [Drosophila melanogaster]
gi|116806618|emb|CAL26735.1| CG6094 [Drosophila melanogaster]
gi|116806622|emb|CAL26737.1| CG6094 [Drosophila melanogaster]
gi|116806626|emb|CAL26739.1| CG6094 [Drosophila melanogaster]
gi|116806628|emb|CAL26740.1| CG6094 [Drosophila melanogaster]
gi|116806630|emb|CAL26741.1| CG6094 [Drosophila melanogaster]
gi|116806634|emb|CAL26743.1| CG6094 [Drosophila melanogaster]
gi|116806638|emb|CAL26745.1| CG6094 [Drosophila melanogaster]
gi|220944644|gb|ACL84865.1| CG6094-PA [synthetic construct]
gi|220954434|gb|ACL89760.1| CG6094-PA [synthetic construct]
gi|223968159|emb|CAR93810.1| CG6094-PA [Drosophila melanogaster]
gi|223968161|emb|CAR93811.1| CG6094-PA [Drosophila melanogaster]
gi|223968167|emb|CAR93814.1| CG6094-PA [Drosophila melanogaster]
gi|440213675|gb|AGB92888.1| CG6094, isoform B [Drosophila melanogaster]
Length = 203
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVAQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A PAP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVAPAPP-SEETLEKLRRR 173
>gi|116806636|emb|CAL26744.1| CG6094 [Drosophila melanogaster]
Length = 203
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVAQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A PAP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVAPAPP-SEETLEKLRRR 173
>gi|116806632|emb|CAL26742.1| CG6094 [Drosophila melanogaster]
Length = 203
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVAQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A PAP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVAPAPP-SEETLEKLRRR 173
>gi|116806620|emb|CAL26736.1| CG6094 [Drosophila melanogaster]
Length = 203
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 109/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+ + NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVAQADWIPEQTRQKLLRVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A PAP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVAPAPP-SEETLEKLRRR 173
>gi|116806624|emb|CAL26738.1| CG6094 [Drosophila melanogaster]
Length = 203
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVAQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A PAP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVVPAPP-SEETLEKLRRR 173
>gi|116806640|emb|CAL26746.1| CG6094 [Drosophila simulans]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 109/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPP---------------PSSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVEQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A AP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVAAAPP-SEETLEKLRRR 173
>gi|307171559|gb|EFN63374.1| Immature colon carcinoma transcript 1 protein [Camponotus
floridanus]
Length = 201
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 106/166 (63%), Gaps = 26/166 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS +SL+KLYP S L TP+ PD P KF+G IP+
Sbjct: 31 FKSEVSLEKLYPESKQKLYTPS----FVPD------------PKA-KFSGYIPI------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+++ ITYS SSGPGGQ+VN V+TKVD+RF+VN A WL+E+++ +L E KN++NKDG
Sbjct: 68 ---DKVQITYSGSSGPGGQNVNCVNTKVDLRFQVNNATWLSEEIRTKLAEQEKNKINKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
YLIIKSD TRSQ LNLADA+ LR MI P+ S ++I+RIR
Sbjct: 125 YLIIKSDLTRSQHLNLADALEKLRTMIRATLVERPKPSLESIERIR 170
>gi|223968147|emb|CAR93804.1| CG6094-PA [Drosophila melanogaster]
gi|223968149|emb|CAR93805.1| CG6094-PA [Drosophila melanogaster]
gi|223968151|emb|CAR93806.1| CG6094-PA [Drosophila melanogaster]
gi|223968153|emb|CAR93807.1| CG6094-PA [Drosophila melanogaster]
gi|223968155|emb|CAR93808.1| CG6094-PA [Drosophila melanogaster]
gi|223968157|emb|CAR93809.1| CG6094-PA [Drosophila melanogaster]
gi|223968165|emb|CAR93813.1| CG6094-PA [Drosophila melanogaster]
gi|223968169|emb|CAR93815.1| CG6094-PA [Drosophila melanogaster]
Length = 203
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 109/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVAQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I + PAP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEVVAPAPP-SEETLEKLRRR 173
>gi|195339861|ref|XP_002036535.1| GM18502 [Drosophila sechellia]
gi|194130415|gb|EDW52458.1| GM18502 [Drosophila sechellia]
Length = 203
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 109/170 (64%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP + + + TP P + + KF+G IP+
Sbjct: 31 YKSDLSLDKIYPGARLQIYTPPPPSIGSD-----------------KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVEQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A AP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVAAAPP-SEETLEKLRRR 173
>gi|195578251|ref|XP_002078979.1| GD23712 [Drosophila simulans]
gi|194190988|gb|EDX04564.1| GD23712 [Drosophila simulans]
Length = 203
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 108/170 (63%), Gaps = 29/170 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLD +YP + + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDTIYPGARLQIYTPPP---------------PSSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVEQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I +A AP SE+T++++R R
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVAAAPP-SEETLEKLRRR 173
>gi|91088001|ref|XP_973768.1| PREDICTED: similar to orf 140; significant similarity to ORF next
to beta-keto adipate succinyl CoA transferase from P.
putida, putative [Tribolium castaneum]
gi|270012062|gb|EFA08510.1| hypothetical protein TcasGA2_TC006163 [Tribolium castaneum]
Length = 193
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 108/168 (64%), Gaps = 26/168 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKSSISL LYPNSS+ L TP+ K P+ +G KF G +P+
Sbjct: 24 YKSSISLQNLYPNSSLKLTTPS----KPPN-------------EGDKFTGYVPI------ 60
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++LDITYSRS+GPGGQ+VN V+TKV+IRF VN+A W+N+ +K +++E KN++ K+G
Sbjct: 61 ---DQLDITYSRSTGPGGQNVNKVNTKVEIRFHVNSATWINDQIKAKMLEKFKNKVTKEG 117
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
+++ +SD TRSQQLNLAD + +R + + SE+T ++IR R
Sbjct: 118 FVVFRSDLTRSQQLNLADCLEKIRASVRSCIVEDYKPSEETAEKIRRR 165
>gi|195471896|ref|XP_002088238.1| GE18467 [Drosophila yakuba]
gi|194174339|gb|EDW87950.1| GE18467 [Drosophila yakuba]
Length = 203
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 110/167 (65%), Gaps = 29/167 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP++ + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKIYPSARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L+ITYSRSSGPGGQHVN+V+TKVD+RFKV+ A+W+ E +++L+++ NR+ KDG
Sbjct: 68 ---DRLEITYSRSSGPGGQHVNTVNTKVDVRFKVSQADWIPEQTRQKLLKVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRI 186
Y IKSD TRSQQ+NLADA+ LR +I +A + AP SE+T++++
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTIIRSQEAVEAAPP-SEETLEKL 170
>gi|194862271|ref|XP_001969963.1| GG23648 [Drosophila erecta]
gi|190661830|gb|EDV59022.1| GG23648 [Drosophila erecta]
Length = 203
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 109/167 (65%), Gaps = 29/167 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDKLYP++ + + TP P P D KF+G IP+
Sbjct: 31 YKSDLSLDKLYPSARLQIYTPPP---------------PPSGSD--KFSGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L+ + NR+ KDG
Sbjct: 68 ---DKLEITYSRSSGPGGQHVNTVNTKVDVRFKVAQADWIPEQTRQKLLTVLANRITKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRI 186
Y IKSD TRSQQ+NLADA+ LR +I +A + AP SE+T++++
Sbjct: 125 YFYIKSDLTRSQQMNLADALEKLRTVIRSQEAVETAPP-SEETLEKL 170
>gi|195435332|ref|XP_002065648.1| GK14559 [Drosophila willistoni]
gi|194161733|gb|EDW76634.1| GK14559 [Drosophila willistoni]
Length = 200
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 107/169 (63%), Gaps = 26/169 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS ISLDK+YPN+ + L TP P KFNG IP+
Sbjct: 27 YKSDISLDKIYPNARLQLYTPPPPPPSGSK----------------KFNGFIPI------ 64
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+WL+++ + +L++ N++ KDG
Sbjct: 65 ---NKLEITYSRSSGPGGQHVNTVNTKVDLRFKVAEADWLSQETRDKLLKALHNKITKDG 121
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI-WKAAKPAPQISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR +I + + A SE+T++++R R
Sbjct: 122 YYFIKSDLTRSQQMNLADALEKLRTLIRAQEVEAAAGPSEETLEKLRRR 170
>gi|322792012|gb|EFZ16117.1| hypothetical protein SINV_05610 [Solenopsis invicta]
Length = 203
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 101/147 (68%), Gaps = 24/147 (16%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS++SL+ LYP S++ L TPT V PD P KF+G IP+
Sbjct: 31 FKSALSLENLYPGSNLKLHTPTF--VSKPD------------PKA-KFSGYIPI------ 69
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+++ ITYS SSGPGGQ+VN V+TKVD+RF+V++A WL+E+++K+L E +N++NK+G
Sbjct: 70 ---DKIQITYSGSSGPGGQNVNCVNTKVDLRFQVDSATWLSEEIRKKLAEQQRNKINKEG 126
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI 168
YLIIKSD TRSQ LNLADA+ LR MI
Sbjct: 127 YLIIKSDLTRSQHLNLADALEKLREMI 153
>gi|195114812|ref|XP_002001961.1| GI17124 [Drosophila mojavensis]
gi|193912536|gb|EDW11403.1| GI17124 [Drosophila mojavensis]
Length = 198
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 110/169 (65%), Gaps = 26/169 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YPN+ + L TP P + D KFNG IP+
Sbjct: 31 YKSDLSLDKIYPNARLQLYTPPPPPPGSGD----------------KFNGYIPM------ 68
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++L+I+YSRSSGPGGQHVN+ +TKVD+RFK++ A+W+ E +++L++ N+LNK+G
Sbjct: 69 ---DKLEISYSRSSGPGGQHVNTSNTKVDVRFKLSEAHWIPEKTREKLLKALSNKLNKEG 125
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP-QISEDTIDRIRIR 189
Y IKSD TRSQQ+NLADA+ LR++I P + SE+T++++R R
Sbjct: 126 YYFIKSDLTRSQQMNLADALEKLRSLIRAQELDEPTEPSEETVEKLRRR 174
>gi|242008434|ref|XP_002425011.1| Immature colon carcinoma transcript 1 protein precursor, putative
[Pediculus humanus corporis]
gi|212508640|gb|EEB12273.1| Immature colon carcinoma transcript 1 protein precursor, putative
[Pediculus humanus corporis]
Length = 190
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 106/166 (63%), Gaps = 27/166 (16%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS++SLD LYPNS L PD P+G KF+G IP+K
Sbjct: 25 FKSNLSLDILYPNSVDLKPFKPPDN---PEG-KFSGFIPIK------------------- 61
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+LDI Y++SSGPGGQ+VN TKVDIRF V +A W++ED K++L+E R+NKDG
Sbjct: 62 ----DLDIKYTKSSGPGGQNVNKRDTKVDIRFHVKSATWISEDTKQKLLEKYYTRVNKDG 117
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
Y +IKSD+TRSQ LN ADA++ +R++I+K +P + S +TI++ R
Sbjct: 118 YFVIKSDKTRSQDLNRADALSYIRSIIFKLEEPEKETSPETIEKHR 163
>gi|307195161|gb|EFN77154.1| Immature colon carcinoma transcript 1 protein [Harpegnathos
saltator]
Length = 201
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 101/163 (61%), Gaps = 30/163 (18%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS++SL+ LYP S L TP+ PD LKF+G IP+
Sbjct: 31 FKSALSLENLYPESRQKLYTPS----FVPDP-------------NLKFDGFIPM------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+LDI YS SSGPGGQHVN V+TKVD+RF+++ A WL+E+++ +L E KN++NKDG
Sbjct: 68 ---NKLDIKYSASSGPGGQHVNRVNTKVDLRFQLSTATWLSEEIRTKLAEQYKNKVNKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIW----KAAKPAPQISE 180
YL+I+SD TRSQ LNLADA+ LR MI + KP P+ E
Sbjct: 125 YLVIQSDLTRSQHLNLADALEKLREMIRSTLVEPPKPTPESEE 167
>gi|156549520|ref|XP_001600156.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Nasonia vitripennis]
Length = 204
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 98/147 (66%), Gaps = 25/147 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS+ SL+ LYP S++ L +P K P KF+G IP+
Sbjct: 31 YKSAYSLENLYPKSNLNLSSPN---------------FLAKDPSA-KFSGYIPI------ 68
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+E+D+TYS SSGPGGQ+VN VSTKVD+RFKV A+WL+ ++K++L+E + N++NK+G
Sbjct: 69 ---KEIDVTYSSSSGPGGQNVNRVSTKVDLRFKVEDASWLSNEIKEKLLEKHPNQINKNG 125
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI 168
YLIIKSD TRSQQLNLADA+ LR MI
Sbjct: 126 YLIIKSDLTRSQQLNLADALHKLRQMI 152
>gi|195401196|ref|XP_002059200.1| GJ16162 [Drosophila virilis]
gi|194156074|gb|EDW71258.1| GJ16162 [Drosophila virilis]
Length = 201
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 105/166 (63%), Gaps = 26/166 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YPN+ + L TP +G KFNG IP+
Sbjct: 28 YKSDLSLDKIYPNARLQLFTPP--PPPPGNGGKFNGYIPM-------------------- 65
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++L+ITYSRSSGPGGQHVN+V++KVD+RFK+ A W+ E +++L+++ N+LNK+G
Sbjct: 66 ---DKLEITYSRSSGPGGQHVNTVNSKVDVRFKLAEAQWIPEQTRQKLLQVLANKLNKEG 122
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQI-SEDTIDRI 186
Y IKSD TRSQQLNLADA+ LR +I AP SE T++++
Sbjct: 123 YYFIKSDLTRSQQLNLADALEKLRTIIRAQELDAPTGPSELTLEKL 168
>gi|194761932|ref|XP_001963145.1| GF15799 [Drosophila ananassae]
gi|190616842|gb|EDV32366.1| GF15799 [Drosophila ananassae]
Length = 205
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 110/167 (65%), Gaps = 28/167 (16%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YP++ + + TP P + + KFNG IP+
Sbjct: 31 YKSDLSLDKIYPSARLQIYTPPPPPPGSDN----------------KFNGFIPI------ 68
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++L+ITYSRSSGPGGQHVN+V+TKVD+RFKV A+W+ E +++L++ NR+ K+G
Sbjct: 69 ---DKLEITYSRSSGPGGQHVNTVNTKVDLRFKVAEADWIPEQTRQKLLKTLANRITKEG 125
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMI--WKAAKPAPQISEDTIDRI 186
Y IKSD TRSQQ+NLADA+ LR +I +AA+ +P SE+T++++
Sbjct: 126 YYYIKSDLTRSQQMNLADALEKLRTIIRAQEAAEASPP-SEETLEKL 171
>gi|321460097|gb|EFX71143.1| hypothetical protein DAPPUDRAFT_231562 [Daphnia pulex]
Length = 200
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 35/194 (18%)
Query: 1 MNTILSFHKLI---SNQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNG 57
+N + F +++ S+ R + F KSSI+L+KLYP+S + + T
Sbjct: 4 LNNLSCFRRILINSSSSRAYLSGF-KSSITLEKLYPSSRLDITT---------------- 46
Query: 58 VIPVKAPDG--LKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKV 115
IP KAP+ KF+G IP+ +++ I+Y+RSSGPGGQ+VN VSTK +IRF +
Sbjct: 47 -IP-KAPESKDRKFSGYIPM---------DKIQISYARSSGPGGQNVNCVSTKAEIRFHL 95
Query: 116 NAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPA 175
+A W+ E V+ +L E KN+L+K+GY I+KSDRTRSQ LNLAD + LR++I A+
Sbjct: 96 ASAEWIPEPVRVKLAEKVKNQLSKEGYFIVKSDRTRSQHLNLADTLDKLRDLIQSTAQSL 155
Query: 176 --PQISEDTIDRIR 187
P+IS +T++R R
Sbjct: 156 VIPEISPETVERQR 169
>gi|198472715|ref|XP_001356042.2| GA19347 [Drosophila pseudoobscura pseudoobscura]
gi|198139128|gb|EAL33101.2| GA19347 [Drosophila pseudoobscura pseudoobscura]
Length = 203
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 103/162 (63%), Gaps = 25/162 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YPN+ + L TP P + + KF+G IP+
Sbjct: 31 YKSDLSLDKIYPNARLQLYTPPPPPPSSAN----------------KFSGYIPM------ 68
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++L+ITYSRSSGPGGQHVN+V+TKVD+RFK+ A+W+ E+ +++L+++ N++ K+G
Sbjct: 69 ---DKLEITYSRSSGPGGQHVNTVNTKVDVRFKLAEAHWIPEETRQKLLKVLANKITKEG 125
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTI 183
Y IKSD +RSQQLNLADA+ LR +I SE+T+
Sbjct: 126 YYYIKSDVSRSQQLNLADALEKLRTVIRAQEVEVAAPSEETL 167
>gi|195161551|ref|XP_002021626.1| GL26610 [Drosophila persimilis]
gi|194103426|gb|EDW25469.1| GL26610 [Drosophila persimilis]
Length = 203
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 102/162 (62%), Gaps = 25/162 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
YKS +SLDK+YPN+ + L TP P + + KF+G IP+
Sbjct: 31 YKSDLSLDKIYPNARLQLYTPPPPPPSSAN----------------KFSGYIPM------ 68
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++L+ITYSRSSGPGGQHVN+V+TKVD+RFK+ A W+ E+ +++L+++ N++ K+G
Sbjct: 69 ---DKLEITYSRSSGPGGQHVNTVNTKVDVRFKLAEAQWIPEETRQKLLKVLANKITKEG 125
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTI 183
Y IKSD +RSQQLNLADA+ LR +I SE+T+
Sbjct: 126 YYYIKSDVSRSQQLNLADALEKLRTVIRAQEVEVAAPSEETL 167
>gi|332026421|gb|EGI66549.1| Immature colon carcinoma transcript 1 protein [Acromyrmex
echinatior]
Length = 201
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 103/166 (62%), Gaps = 26/166 (15%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SL+ LY S + L TPT PD P KF+G IP+
Sbjct: 31 FKSPFSLENLYLGSKLKLYTPT----FVPD------------PKA-KFSGYIPL------ 67
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+++ ITYS SSGPGGQ+VN V+TKVD+RF+V +A WL+E+++ +L+E KN++NKDG
Sbjct: 68 ---DKVKITYSSSSGPGGQNVNCVNTKVDLRFQVESATWLSEEIRTKLVEQFKNKINKDG 124
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
YLIIKSD TRSQ LNLADA+ LR MI PQ S ++ ++ R
Sbjct: 125 YLIIKSDLTRSQHLNLADALEKLRAMIRVILVVPPQPSPESNEKKR 170
>gi|312374466|gb|EFR22017.1| hypothetical protein AND_15886 [Anopheles darlingi]
Length = 153
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 17/122 (13%)
Query: 64 PDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNE 123
PDG FNG IP+ +L+IT+SRSSGPGGQ+VN+VSTKVDIRF + +A+WL E
Sbjct: 12 PDG-SFNGYIPI---------NKLNITFSRSSGPGGQNVNTVSTKVDIRFHLESASWLPE 61
Query: 124 DVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA-----AKPAPQI 178
+K+L EL R+ KDG+L+++S+ TRSQQ+N ADAM LR+ I +A A+P+P+
Sbjct: 62 ATRKRLAEL--GRITKDGFLVVRSELTRSQQMNTADAMERLRSFIRQAEQPLSAEPSPET 119
Query: 179 SE 180
E
Sbjct: 120 EE 121
>gi|442750287|gb|JAA67303.1| Putative peptidyl-trna hydrolase [Ixodes ricinus]
Length = 194
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 81/121 (66%), Gaps = 9/121 (7%)
Query: 62 KAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWL 121
KA D F G +P+ ++L ++Y RSSGPGGQ+VN V++KV+IRF V +A W+
Sbjct: 48 KADDENVFTGNVPL---------DQLQVSYCRSSGPGGQNVNKVNSKVEIRFHVQSAQWI 98
Query: 122 NEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED 181
+K+L+E ++ +NKDG LI+ S++TR QQLN AD + L+ ++ KA +P P++S +
Sbjct: 99 PPLGRKKLLETCQHMMNKDGQLIVTSEKTRYQQLNTADCLERLKALVIKACEPPPELSPE 158
Query: 182 T 182
T
Sbjct: 159 T 159
>gi|410928074|ref|XP_003977426.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Takifugu rubripes]
Length = 148
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIK 146
L I+YSRSSGPGGQHVN VSTK ++RF V+ A+W+ EDV++++IE NKN +NK G L++
Sbjct: 19 LTISYSRSSGPGGQHVNKVSTKAEVRFNVHTADWIPEDVRQKIIEKNKNHINKAGELLVT 78
Query: 147 SDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQISED 181
S+ +RSQQ NL+D + + +I KA+ KP +ED
Sbjct: 79 SELSRSQQRNLSDCIQRIAAIIAKASEKPHEPTAED 114
>gi|47215769|emb|CAG02565.1| unnamed protein product [Tetraodon nigroviridis]
Length = 132
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E L ++YSRSSGPGGQHVN VSTK ++RF V+ A+W+ EDV++++IE N+NR+NK G L+
Sbjct: 1 ERLTVSYSRSSGPGGQHVNKVSTKAEVRFNVHTADWIPEDVRQKIIEKNRNRINKAGELL 60
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQISED 181
+ S+ +RSQQ NL++ + + ++ +A+ KP +ED
Sbjct: 61 VTSELSRSQQRNLSECVRRISAIVAEASEKPHQPAAED 98
>gi|443685189|gb|ELT88888.1| hypothetical protein CAPTEDRAFT_179133 [Capitella teleta]
Length = 166
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 76/120 (63%), Gaps = 10/120 (8%)
Query: 62 KAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWL 121
+A DG F G IP+ EL++ + R SGPGGQ+VN V+TKV++RF V A W+
Sbjct: 24 QAEDGA-FTGFIPL---------RELEVKHLRGSGPGGQNVNKVNTKVEVRFHVETAEWV 73
Query: 122 NEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED 181
++ + L++ KNR+NK+GYLI+ SD+TR Q LN AD + +R M+ A P + S+D
Sbjct: 74 PKEARYVLLQQEKNRINKEGYLIVSSDKTRKQLLNQADCLEKIRQMVRLACTPDVEPSQD 133
>gi|348502307|ref|XP_003438709.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Oreochromis niloticus]
Length = 194
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E L I+YSRSSGPGGQHVN VSTK ++RF V A W+ EDV+++++E NK R+ K G L+
Sbjct: 63 ERLTISYSRSSGPGGQHVNKVSTKAEVRFHVQTAEWIPEDVREKILEKNKTRITKAGELL 122
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQISED 181
+ S+ +RSQQ NL+D + + +I +A+ KP +ED
Sbjct: 123 VTSELSRSQQRNLSDCIQKISAIIAEASEKPHEPTAED 160
>gi|213513061|ref|NP_001134526.1| peptidyl-tRNA hydrolase ICT1, mitochondrial [Salmo salar]
gi|296439630|sp|B5XAM2.1|ICT1_SALSA RecName: Full=Peptidyl-tRNA hydrolase ICT1, mitochondrial; AltName:
Full=Immature colon carcinoma transcript 1 protein
homolog; Flags: Precursor
gi|209734046|gb|ACI67892.1| Immature colon carcinoma transcript 1 protein precursor [Salmo
salar]
Length = 191
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L ++YSRSSGPGGQHVN VSTK ++RF V A+W+ EDV++++I NKNR+NK G L+
Sbjct: 60 DRLTVSYSRSSGPGGQHVNKVSTKAEVRFHVYTADWIPEDVRQKIILNNKNRINKAGELL 119
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQISED 181
+ S+++RSQQ N+ D + + ++I KA KP +ED
Sbjct: 120 VTSEQSRSQQRNMGDCIQKISDIIAKATEKPHEPSAED 157
>gi|241828746|ref|XP_002416679.1| immature colon carcinoma transcript, putative [Ixodes scapularis]
gi|215511143|gb|EEC20596.1| immature colon carcinoma transcript, putative [Ixodes scapularis]
Length = 166
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 80/121 (66%), Gaps = 9/121 (7%)
Query: 62 KAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWL 121
KA D F G +P+ ++L ++Y RSSGPGGQ+VN V++KV+IRF V +A W+
Sbjct: 48 KADDENVFTGNVPL---------DQLQVSYCRSSGPGGQNVNKVNSKVEIRFHVQSAQWI 98
Query: 122 NEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED 181
+K+L+E ++ +NK+G LI+ S++TR QQLN D + L+ +I KA +P P++S +
Sbjct: 99 PPLGRKKLLETCQHMMNKNGQLIVTSEKTRYQQLNTTDCLERLKALIIKACEPPPELSPE 158
Query: 182 T 182
T
Sbjct: 159 T 159
>gi|145524327|ref|XP_001447991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415524|emb|CAK80594.1| unnamed protein product [Paramecium tetraurelia]
Length = 147
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 71/107 (66%), Gaps = 5/107 (4%)
Query: 68 KFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKK 127
KF V+IP+ E+L+ +S+SSGPGGQHVN ++K +IRF + A+WLN+D KK
Sbjct: 11 KFCSYRSVIIPK-----EKLECRFSKSSGPGGQHVNKTNSKAEIRFNLKTADWLNDDQKK 65
Query: 128 QLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
+ I L N +NK+G +I+ S TR Q NL DA+ L+ MI++ +KP
Sbjct: 66 KFIRLYPNYVNKEGEIILTSQFTREQSKNLEDAIDKLKEMIFECSKP 112
>gi|357477049|ref|XP_003608810.1| Immature colon carcinoma transcript 1 protein [Medicago truncatula]
gi|355509865|gb|AES91007.1| Immature colon carcinoma transcript 1 protein [Medicago truncatula]
Length = 232
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 104/173 (60%), Gaps = 3/173 (1%)
Query: 15 RNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPV-KAPDGLKFNGVI 73
R++ + F+ SS+ L + +P +++ + D + + V + + + +
Sbjct: 30 RDLSRPFFLSSLQLQRSHPATAIRCASSASDSGNNKVSSRLSQVHELLQEAEHRSLSADY 89
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
IP+ + + + ++++RS GPGGQ+VN V+TKVD+RF V A+WL+E V+++++++
Sbjct: 90 NAPIPKITL--DHVTVSFARSGGPGGQNVNKVNTKVDMRFNVGKAHWLSERVREKIMQME 147
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
KNR+NKDG L+I S +TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 148 KNRMNKDGELVISSTKTRTQKGNIEDALAKLQEIIDAASYVPPPPSEEQKKKI 200
>gi|77735937|ref|NP_001029665.1| peptidyl-tRNA hydrolase ICT1, mitochondrial precursor [Bos taurus]
gi|85542054|sp|Q3T116.1|ICT1_BOVIN RecName: Full=Peptidyl-tRNA hydrolase ICT1, mitochondrial; AltName:
Full=Immature colon carcinoma transcript 1 protein
homolog; Flags: Precursor
gi|74268305|gb|AAI02163.1| Immature colon carcinoma transcript 1 [Bos taurus]
gi|296476098|tpg|DAA18213.1| TPA: immature colon carcinoma transcript 1 protein precursor [Bos
taurus]
Length = 206
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 29/177 (16%)
Query: 14 QRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVI 73
R V ++S+ SLDKLYP S G +P A G N I
Sbjct: 31 HRQVEGTEFRSAYSLDKLYPESR---------------GADTAWRVPGDAKQG---NDDI 72
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
PV + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +
Sbjct: 73 PV---------DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKMALTH 123
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED--TIDRIRI 188
KN++N+ G LI+ S+ +R Q NLAD + +R+MI +A++PA + S++ + ++RI
Sbjct: 124 KNKINRAGELILTSEYSRYQFRNLADCLQKIRDMIAEASQPATEPSKEDAALQKLRI 180
>gi|432963782|ref|XP_004086834.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Oryzias latipes]
Length = 183
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E L +TYSRSSGPGGQHVN V+TK +RF V+ A+W+ ED++ ++IE N++R+NK G L+
Sbjct: 52 ERLTVTYSRSSGPGGQHVNKVNTKAKVRFHVHTADWIPEDIRLKVIEKNRSRMNKAGELL 111
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQISED 181
+ S+ +RSQ NL+D + + ++ +A+ KP +ED
Sbjct: 112 VSSEVSRSQHRNLSDCLQKISTILAEASEKPHEPTAED 149
>gi|256087184|ref|XP_002579755.1| hypothetical protein [Schistosoma mansoni]
gi|353232874|emb|CCD80230.1| hypothetical protein Smp_086710 [Schistosoma mansoni]
Length = 199
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 15/125 (12%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
F+G IP+ +EL I+Y+ SSGPGGQHVN TKV+IRF V +A+W+ + VK+
Sbjct: 55 FSGYIPI---------DELQISYAYSSGPGGQHVNKNKTKVEIRFHVPSASWIPDQVKQL 105
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA----KPAPQISEDTID 184
+E NR+NK+ Y II SD TR Q LN AD + +R +I + KP P S +T++
Sbjct: 106 FMEKEANRINKENYFIITSDHTRKQILNQADCLERIRRIIRECVDSLNKPEP--SPETLE 163
Query: 185 RIRIR 189
I+ R
Sbjct: 164 AIQRR 168
>gi|327265039|ref|XP_003217316.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Anolis
carolinensis]
Length = 204
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 33/169 (19%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP T + DG N +P IPV
Sbjct: 39 FRSEYSLDKLYPRQ-------TKETEATKDGT--NQTVPN-----------IPV------ 72
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L ++Y RSSGPGGQ+VN V+TK ++RF + +A+W+ EDV++++ + KN++ K G
Sbjct: 73 ---DRLSVSYCRSSGPGGQNVNKVNTKAEVRFHLASADWITEDVRQKMAVMQKNKITKFG 129
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK----PAPQISEDTIDRI 186
LI+ S+ +R Q NLAD + +R+MI +A P+ + SE I R+
Sbjct: 130 ELIVTSEVSRYQMRNLADCLQKIRDMIVEATATPEVPSKETSEMMIARV 178
>gi|126308771|ref|XP_001377961.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Monodelphis domestica]
Length = 208
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYPNS G + IP D + + IP+
Sbjct: 41 FKSIYSLDKLYPNSC---------------GRETAWRIP---DDAKQASTDIPI------ 76
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L ++YS+SSGPGGQ+VN V+TK ++RF + A+W+ E V++++ L KN+++K G
Sbjct: 77 ---DRLQVSYSKSSGPGGQNVNKVNTKAEVRFHLATADWIAEPVRQKISVLFKNKISKSG 133
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDTI-DRIRI 188
LII SD +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 134 ELIITSDSSRYQFRNLADCLQKIRDMIAQASQVPKEPSKEDAVLRRIRI 182
>gi|149723321|ref|XP_001496624.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Equus
caballus]
Length = 206
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP S + + PD D + N IP+
Sbjct: 39 FQSIYSLDKLYPESR-----GSDTAWRVPD-------------DAKQANNDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ +KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKMAITHKNKINRSG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED--TIDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++PA + S++ + RIRI
Sbjct: 132 ELILTSECSRYQFRNLADCLQKIRDMIAEASQPAKEPSKEDAVLQRIRI 180
>gi|346716134|ref|NP_001231224.1| peptidyl-tRNA hydrolase ICT1, mitochondrial [Sus scrofa]
Length = 205
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 93/168 (55%), Gaps = 28/168 (16%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP S + D + PD K IPV
Sbjct: 39 FQSIYSLDKLYPES------------RGSD-------TAWRLPDDAKQANDIPV------ 73
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V+ +L +KNR+N+ G
Sbjct: 74 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRLKLAVKHKNRINRSG 130
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
LI+ S+ +R Q NLAD + LR+MI +A++PA + S + + R R
Sbjct: 131 ELILTSECSRYQFRNLADCLQKLRDMIAEASQPAKEPSREDAELRRSR 178
>gi|56759384|gb|AAW27832.1| SJCHGC06705 protein [Schistosoma japonicum]
Length = 199
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 15/125 (12%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
FNG IP+ +EL I+Y SSGPGGQHVN TKV+IRF V +A+W+ + VKK+
Sbjct: 55 FNGYIPI---------DELQISYLYSSGPGGQHVNKNKTKVEIRFHVPSASWIPDQVKKR 105
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA----KPAPQISEDTID 184
+ NR+N++ Y II SD TR Q LN AD + +R ++ + KP P + +T++
Sbjct: 106 FLVWEANRINRENYFIITSDHTRKQILNQADCLERIRRIVRECENSLLKPEP--NPETLE 163
Query: 185 RIRIR 189
I+ R
Sbjct: 164 AIQRR 168
>gi|308497610|ref|XP_003110992.1| hypothetical protein CRE_04754 [Caenorhabditis remanei]
gi|308242872|gb|EFO86824.1| hypothetical protein CRE_04754 [Caenorhabditis remanei]
Length = 168
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 78/132 (59%), Gaps = 14/132 (10%)
Query: 38 LLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGP 97
+L+ +P +K+ +K + A FNGVIP TE+++ Y+ SSGP
Sbjct: 1 MLRNISPFVLKSTRQIKISA-----ATSSASFNGVIP---------TEKIEKRYTLSSGP 46
Query: 98 GGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNL 157
GGQ+V +TKV+IRFKVN A WL+E ++ + E +R+N G LII SDRTR + LN+
Sbjct: 47 GGQNVQKNATKVEIRFKVNEAEWLSETLRNAIEEKLSHRINSAGELIIDSDRTRERHLNV 106
Query: 158 ADAMTTLRNMIW 169
AD LR+ I+
Sbjct: 107 ADCFDKLRSAIY 118
>gi|395532950|ref|XP_003768527.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial isoform 1
[Sarcophilus harrisii]
gi|395532952|ref|XP_003768528.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial isoform 2
[Sarcophilus harrisii]
Length = 207
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 31/170 (18%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGV-IPVVIPRF 80
+KS SLD LYPNS + PDG K + IP+
Sbjct: 40 FKSIYSLDNLYPNSR-------------------GRETAWRVPDGAKQSSTDIPI----- 75
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
+ L I+YS+SSGPGGQ+VN V+TK ++RF + A+W+ E V++++ L KN++N+
Sbjct: 76 ----DRLQISYSKSSGPGGQNVNKVNTKAEVRFHLATADWIAEPVQQKIAVLFKNKINRS 131
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDTI-DRIRI 188
G LII SD +R Q NLA+ + +R+MI +A++ P ED + RIR+
Sbjct: 132 GELIITSDSSRYQFRNLANCLQKIRDMIAQASQIPKEPSKEDAVLRRIRV 181
>gi|196016464|ref|XP_002118084.1| hypothetical protein TRIADDRAFT_17765 [Trichoplax adhaerens]
gi|190579297|gb|EDV19395.1| hypothetical protein TRIADDRAFT_17765 [Trichoplax adhaerens]
Length = 90
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 67/89 (75%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
I + LD+ YS+S GPGGQ+VN V+TKVD+RF V++ W+ E VK++L +L K R+NK+G
Sbjct: 2 ILDCLDVKYSKSGGPGGQNVNKVNTKVDVRFHVDSMEWIPEWVKQRLCQLEKKRINKEGQ 61
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L+I S + RSQ+LNL DA+ L ++I KA
Sbjct: 62 LVISSTKFRSQKLNLDDAIQKLEDIINKA 90
>gi|410981664|ref|XP_003997186.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Felis
catus]
Length = 206
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP S + + PD D + N IP+
Sbjct: 39 FQSIYSLDKLYPESRG-----SDTAWRVPD-------------DAKQANNDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E ++++ +KN++NK G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIPEPARQKMAITHKNKINKSG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED--TIDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++PA + S++ + RIRI
Sbjct: 132 ELILTSECSRYQFRNLADCLQKIRDMIAEASQPAKEPSKEDAVLHRIRI 180
>gi|195637950|gb|ACG38443.1| immature colon carcinoma transcript 1 protein precursor [Zea mays]
Length = 237
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 72/102 (70%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS GPGGQ+VN V+TKVD+RF V A+WL E +K+++++ KNR+NKDG L+
Sbjct: 94 DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKEAHWLGERIKERILQAEKNRINKDGELV 153
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ ++ +I A+ P +ED +I
Sbjct: 154 ISSTKTRTQKGNIEDALQKIQAIIDAASYVPPPPTEDQKKKI 195
>gi|296203139|ref|XP_002748764.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Callithrix
jacchus]
Length = 206
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSETAWRVPDGAK-------------QADNDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINRSG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK--PAPQISEDTIDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ++ + R+RI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPSKEDNKLQRLRI 180
>gi|390366844|ref|XP_794598.3| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 202
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 22/170 (12%)
Query: 21 FYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRF 80
++S+ SL+KLYP+S + + D K KF+G IPV
Sbjct: 26 HFQSNYSLNKLYPHSEQDITISCRKSHETADQ-KIES----------KFSGQIPV----- 69
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
++L + YSRS G GGQ+V V TKVD+RF V A WL ++V+++L KN++N
Sbjct: 70 ----DKLLVKYSRSGGAGGQNVQKVETKVDVRFLVATAEWLPQNVREKLQVQQKNKINSR 125
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISE--DTIDRIRI 188
G ++I S+RTRSQ N +D + +R+M+ +A + + SE + RIR+
Sbjct: 126 GEMVIVSERTRSQIRNFSDCLQKIRDMVAEAERKPKEPSEKDKAVRRIRV 175
>gi|356514148|ref|XP_003525768.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Glycine max]
Length = 223
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 73/102 (71%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + ++++RS GPGGQ+VN V+TKVD+RF V A WL++ V++++++ KNR+NKDG L+
Sbjct: 90 DHVTVSFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSDRVREKILQTEKNRINKDGELV 149
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ L+ +I A+ P SED +I
Sbjct: 150 ISSTKTRTQKDNIEDALAKLQEIIDAASHVPPPPSEDQKKKI 191
>gi|391338702|ref|XP_003743694.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Metaseiulus occidentalis]
Length = 197
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
F G IP+ +EL I + +SSGPGGQ+ + V+TK ++RF +++A W+ + +++
Sbjct: 58 FTGYIPM---------KELIIKHCKSSGPGGQNGDKVNTKAEVRFHLDSAAWIPGEARER 108
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
L +L + +NK+G++I S+RTR Q LN AD + +R+++++A K P+I+EDT
Sbjct: 109 LKKLCASSINKEGFIIFSSERTRKQFLNTADCIDRIRSVVFEACKKPPEITEDT 162
>gi|226503473|ref|NP_001148646.1| immature colon carcinoma transcript 1 protein [Zea mays]
gi|195621084|gb|ACG32372.1| immature colon carcinoma transcript 1 protein precursor [Zea mays]
gi|414865827|tpg|DAA44384.1| TPA: immature colon carcinoma transcript 1 protein isoform 1 [Zea
mays]
gi|414865828|tpg|DAA44385.1| TPA: immature colon carcinoma transcript 1 protein isoform 2 [Zea
mays]
Length = 227
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 72/102 (70%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS GPGGQ+VN V+TKVD+RF V A+WL E +K+++++ KNR+NKDG L+
Sbjct: 94 DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKEAHWLGERIKERILQAEKNRINKDGELV 153
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ ++ +I A+ P +ED +I
Sbjct: 154 ISSTKTRTQKGNIEDALQKIQAIIDAASYVPPPPTEDQKKKI 195
>gi|253761198|ref|XP_002489061.1| hypothetical protein SORBIDRAFT_0186s002020 [Sorghum bicolor]
gi|241947214|gb|EES20359.1| hypothetical protein SORBIDRAFT_0186s002020 [Sorghum bicolor]
Length = 227
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 72/102 (70%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS GPGGQ+VN V+TKVD+RF V A+WL E +K+++++ KNR+NKDG L+
Sbjct: 94 DHVTVNFARSGGPGGQNVNKVNTKVDMRFNVKEAHWLGERIKERILQAEKNRINKDGELV 153
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ ++ +I A+ P +ED +I
Sbjct: 154 ISSTKTRTQKGNIEDALQKIQAIIDAASYVPPPPTEDQKKKI 195
>gi|403280589|ref|XP_003931798.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 206
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSETAWRVPDGAK-------------QGDNDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++NK G
Sbjct: 75 ---DCLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINKSG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
L++ S+ +R Q NLAD + +R+MI +A++ P ED + R+RI
Sbjct: 132 ELVLTSESSRYQFRNLADCLQKIRDMIAEASQTPKEPSKEDAKLQRLRI 180
>gi|355754365|gb|EHH58330.1| hypothetical protein EGM_08155 [Macaca fascicularis]
Length = 206
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSDTAWRVPDGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G
Sbjct: 75 ---NRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAESVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMIAEASETPKEPTKEDVKLQRIRI 180
>gi|397484396|ref|XP_003813363.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Pan
paniscus]
Length = 206
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSDTAWRVPDGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ ++KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRI 180
>gi|114670383|ref|XP_001138419.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial isoform 2
[Pan troglodytes]
Length = 206
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSDTAWRVPDGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ ++KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRI 180
>gi|156404554|ref|XP_001640472.1| predicted protein [Nematostella vectensis]
gi|156227606|gb|EDO48409.1| predicted protein [Nematostella vectensis]
Length = 104
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 65/87 (74%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L + ++RS+GPGGQ+VN V+TKVD+RF V +ANW+ E+V+ +L+E KNR+NKD L+I
Sbjct: 1 QLLVKFARSTGPGGQNVNKVNTKVDVRFHVPSANWIPEEVRLKLLEREKNRINKDNELVI 60
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
S + RSQ NL DA+ + M+ +A+
Sbjct: 61 SSTKHRSQHRNLQDAICKIEEMVKEAS 87
>gi|17554462|ref|NP_498174.1| Protein R02F2.9 [Caenorhabditis elegans]
gi|351060687|emb|CCD68403.1| Protein R02F2.9 [Caenorhabditis elegans]
Length = 165
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 69/109 (63%), Gaps = 9/109 (8%)
Query: 61 VKAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANW 120
++A FNGVIP TE+++ Y+ SSGPGGQ+V +TKV+IRFKV+ A W
Sbjct: 16 IQASSSATFNGVIP---------TEKIEKRYTLSSGPGGQNVQKNATKVEIRFKVSEAEW 66
Query: 121 LNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
L+E ++ + E +R+N G LII SDRTR + LN+AD LR+ I+
Sbjct: 67 LSESLRDLVEEKLSHRINTAGELIIDSDRTRERHLNVADCFDKLRSAIY 115
>gi|301768935|ref|XP_002919882.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Ailuropoda melanoleuca]
gi|296439629|sp|D2HD32.1|ICT1_AILME RecName: Full=Peptidyl-tRNA hydrolase ICT1, mitochondrial; AltName:
Full=Immature colon carcinoma transcript 1 protein
homolog; Flags: Precursor
gi|281350022|gb|EFB25606.1| hypothetical protein PANDA_008549 [Ailuropoda melanoleuca]
Length = 206
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP S + K PD D + N IP+
Sbjct: 39 FQSIYSLDKLYPESR-----GSDTAWKVPD-------------DAQQTNKDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ ++KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKMAIMHKNKINRSG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP--APQISEDTIDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P + + RIRI
Sbjct: 132 ELILTSECSRYQFRNLADCLQKIRDMIAEASQTPKEPSKEDAALHRIRI 180
>gi|355564875|gb|EHH21364.1| hypothetical protein EGK_04406 [Macaca mulatta]
gi|355568904|gb|EHH25185.1| hypothetical protein EGK_08965 [Macaca mulatta]
Length = 206
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSDTAWRVPDGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G
Sbjct: 75 ---NRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMIAEASETPKEPTKEDVKLQRIRI 180
>gi|301621352|ref|XP_002940027.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Xenopus
(Silurana) tropicalis]
Length = 185
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 32/168 (19%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
Y+S+ SL++LYP S L+T L GV + + R
Sbjct: 23 YRSAYSLERLYPGSD--LRTAA-----------------------LGDQGVADIPVDR-- 55
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
L I+Y +SSGPGGQ+VN V+TK ++RF + +A+W+ EDV++++ KNR+N+ G
Sbjct: 56 -----LTISYCKSSGPGGQNVNKVNTKAEVRFHLASADWIPEDVRQKISVQCKNRINRSG 110
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
LI+ S+++R Q NLA + +R ++ AAK +S++ ++ R R
Sbjct: 111 ELIVVSEQSRYQMENLAACLEKIRGIVADAAKKPKMLSKEDVEVRRAR 158
>gi|380790563|gb|AFE67157.1| peptidyl-tRNA hydrolase ICT1, mitochondrial precursor [Macaca
mulatta]
Length = 206
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSDTAWRVPDGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G
Sbjct: 75 ---NRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMIAEASETPKEPTKEDVKLQRIRI 180
>gi|109099637|ref|XP_001095191.1| PREDICTED: immature colon carcinoma transcript 1 protein-like
[Macaca mulatta]
Length = 206
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSDTAWRVPDGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G
Sbjct: 75 ---NRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMIAEASETPKEPTKEDVKLQRIRI 180
>gi|395825964|ref|XP_003786190.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Otolemur
garnettii]
Length = 206
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SL+KLYP S GL +P D + N IP+
Sbjct: 39 FQSIYSLNKLYPESQ---------------GLDTAWRVP---DDAKQANSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ L+KN++N+ G
Sbjct: 75 ---DRLKISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQRIAILHKNKINRSG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK--PAPQISEDTIDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P + + RIR+
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPSKEDAQLQRIRV 180
>gi|307106514|gb|EFN54759.1| hypothetical protein CHLNCDRAFT_24338, partial [Chlorella
variabilis]
Length = 141
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 72/101 (71%), Gaps = 6/101 (5%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
+++DI ++RSSG GGQ+VN V+TKVD+R +++AA WL+E++K+ + K R+NK+G L
Sbjct: 6 ADDVDIQFARSSGAGGQNVNKVNTKVDMRLRLDAAAWLDEEIKEAVRRAEKKRINKEGEL 65
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMI---WKAAKPAPQISED 181
++ S RTRSQ N+ DA+ L+ ++ WK+ +P I ED
Sbjct: 66 VLTSQRTRSQADNVEDALAKLQEILDAAWKSVQP---IEED 103
>gi|426346686|ref|XP_004041002.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Gorilla
gorilla gorilla]
Length = 206
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S G +PV + +GL G +
Sbjct: 39 FKSIYSLDKLYPES---------------QGSDTAWRVPV-SREGLDGRGQL-------- 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ ++KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQAPKEPTKEDVKLHRIRI 180
>gi|431908790|gb|ELK12382.1| Immature colon carcinoma transcript 1 protein [Pteropus alecto]
Length = 177
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L ++Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +KN++N+ G LI
Sbjct: 46 DRLTVSYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKMAVTHKNKINRSGELI 105
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED--TIDRIRI 188
+ S+ +R Q NLAD + +R+MI +A++PA + S++ + RIRI
Sbjct: 106 LTSECSRYQFRNLADCLQKIRDMIAEASQPAKEPSKEDAVLHRIRI 151
>gi|189441858|gb|AAI67705.1| LOC100170604 protein [Xenopus (Silurana) tropicalis]
Length = 180
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 32/168 (19%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
Y+S+ SL++LYP S L+T L GV + + R
Sbjct: 18 YRSAYSLERLYPGSD--LRTAA-----------------------LGDQGVADIPVDR-- 50
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
L I+Y +SSGPGGQ+VN V+TK ++RF + +A+W+ EDV++++ KNR+N+ G
Sbjct: 51 -----LTISYCKSSGPGGQNVNKVNTKAEVRFHLASADWIPEDVRQKISVQCKNRINRSG 105
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
LI+ S+++R Q NLA + +R ++ AAK +S++ ++ R R
Sbjct: 106 ELIVVSEQSRYQMENLAACLEKIRGIVADAAKKPKMLSKEDVEVRRAR 153
>gi|297701742|ref|XP_002827860.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Pongo
abelii]
Length = 206
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSDTAWRVPDGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ + I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G
Sbjct: 75 ---DRVTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMIAEASQTPKEPTKEDVKLQRIRI 180
>gi|449460427|ref|XP_004147947.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Cucumis sativus]
Length = 235
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 70/98 (71%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSD 148
+ ++RS GPGGQ+VN V+TKVD+RF V A WL+E +++++++ KNR+NKDG L+I S
Sbjct: 106 VNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISST 165
Query: 149 RTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
+TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 166 KTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKI 203
>gi|348558066|ref|XP_003464839.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Cavia
porcellus]
Length = 206
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 92/168 (54%), Gaps = 27/168 (16%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+ S SLDKLYP S + K PD D + IPV
Sbjct: 39 FHSIYSLDKLYPESK-----GSDTAWKIPD-------------DAKQACNDIPV------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y SSGPGGQ+VN V++K ++RF + A+W+ E V++++ +KN++NK G
Sbjct: 75 ---DRLMISYCGSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIALTHKNKINKSG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
LII S+ +R Q NLAD + +R+MI +A++PA + S++ R+R
Sbjct: 132 ELIITSESSRYQFRNLADCLQKIRDMIAEASQPAKEPSKEDAQLKRLR 179
>gi|109118136|ref|XP_001092083.1| PREDICTED: immature colon carcinoma transcript 1 protein [Macaca
mulatta]
Length = 206
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 33/171 (19%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGV-IPVKAPDGLK-FNGVIPVVIPR 79
+KS SLDKLYP +F G + PDG K + IP+
Sbjct: 39 FKSIYSLDKLYP--------------------EFQGSDTAWRVPDGAKQADSDIPL---- 74
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+
Sbjct: 75 -----NRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINR 129
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
G LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 130 LGELILTSESSRYQFRNLADCLQKIRDMIAEASETPKEPTKEDVKLQRIRI 180
>gi|449494312|ref|XP_004159510.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Cucumis sativus]
Length = 232
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 70/98 (71%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSD 148
+ ++RS GPGGQ+VN V+TKVD+RF V A WL+E +++++++ KNR+NKDG L+I S
Sbjct: 103 VNFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINKDGELVISST 162
Query: 149 RTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
+TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 163 KTRTQKGNIEDALEKLQAIIDAASYVPPPPSEEQKKKI 200
>gi|7506187|pir||T16659 hypothetical protein R02F2.2 - Caenorhabditis elegans
Length = 492
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 69/109 (63%), Gaps = 9/109 (8%)
Query: 61 VKAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANW 120
++A FNGVIP TE+++ Y+ SSGPGGQ+V +TKV+IRFKV+ A W
Sbjct: 343 IQASSSATFNGVIP---------TEKIEKRYTLSSGPGGQNVQKNATKVEIRFKVSEAEW 393
Query: 121 LNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
L+E ++ + E +R+N G LII SDRTR + LN+AD LR+ I+
Sbjct: 394 LSESLRDLVEEKLSHRINTAGELIIDSDRTRERHLNVADCFDKLRSAIY 442
>gi|402878855|ref|XP_003903081.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Papio
anubis]
Length = 206
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + PDG K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQ-----GSDTAWRVPDGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G
Sbjct: 75 ---NRLTISYCRSSGPGGQNVNKVNSKEEVRFHLATADWIAEPVRQKIAIMHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMIAEASETPKEPTKEDVKLQRIRI 180
>gi|350407103|ref|XP_003487987.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-tRNA hydrolase ICT1,
mitochondrial-like [Bombus impatiens]
Length = 167
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 17/102 (16%)
Query: 68 KFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKK 127
KF+G I + +ELD TYS SSG G QHVN ++KVD+R A WL ED++
Sbjct: 28 KFDGCI---------LIKELDTTYSCSSGAGEQHVNRTNSKVDLRLHAENATWLAEDIRN 78
Query: 128 QLIE--------LNKNRLNKDGYLIIKSDRTRSQQLNLADAM 161
+L+E KN+L+K+GYLIIKS+ TRSQQLNLA+A+
Sbjct: 79 KLLEQFXIIISLQYKNKLSKEGYLIIKSEVTRSQQLNLAEAL 120
>gi|344236263|gb|EGV92366.1| Immature colon carcinoma transcript 1 protein [Cricetulus griseus]
Length = 213
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP S G+ +P D + + IP+
Sbjct: 46 FQSIYSLDKLYPESK---------------GVDTAWKVP---EDAKQASSDIPL------ 81
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN VS+K ++RF + +A+W+ E V++++ +KN++NK G
Sbjct: 82 ---DRLSISYCRSSGPGGQNVNKVSSKAEVRFHLASADWIAEPVRQKIALKHKNKINKAG 138
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLA+ + +R+MI +A++ P ED + R+RI
Sbjct: 139 ELILTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPTKEDAQLQRLRI 187
>gi|300793799|ref|NP_001178585.1| peptidyl-tRNA hydrolase ICT1, mitochondrial precursor [Rattus
norvegicus]
Length = 206
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 29/177 (16%)
Query: 14 QRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVI 73
R V +KS SLDKLYP S G+ +P A + I
Sbjct: 31 HRQVNGTEFKSIYSLDKLYPES---------------KGVDTAWKVPEHAEQA---SSDI 72
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P+ + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +
Sbjct: 73 PL---------DRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTH 123
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
KN++NK G L++ S+ +R Q NLA+ + +R+MI KA++ P ED + R+RI
Sbjct: 124 KNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRI 180
>gi|225470309|ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Vitis
vinifera]
gi|296082846|emb|CBI22147.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 74/102 (72%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + ++++RS GPGGQ+VN V+TKVD+RF V A WL++ V+++++++ KNR+NKDG ++
Sbjct: 97 DHVTVSFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSDRVRERIMQMEKNRINKDGEIV 156
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 157 ISSTKTRTQKGNIEDALGKLQAIIDAASYVPPPPSEEQKKKI 198
>gi|167525375|ref|XP_001747022.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774317|gb|EDQ87946.1| predicted protein [Monosiga brevicollis MX1]
Length = 238
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 76/120 (63%), Gaps = 9/120 (7%)
Query: 68 KFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKK 127
KFNG IP ++ L I ++RSSGPGGQ+VN V+TK D+RF V +A WL +V++
Sbjct: 64 KFNGPIP---------SDALQIQFARSSGPGGQNVNKVNTKADVRFHVASAEWLPTEVRE 114
Query: 128 QLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
+L E ++R+NK+G L++ TRSQ+ NL AM + +M +A+ + S +T RI+
Sbjct: 115 KLQEQQQSRINKNGELVVAVSDTRSQKKNLQLAMQRILDMCREASAIERETSAETKQRIK 174
>gi|268572333|ref|XP_002641294.1| Hypothetical protein CBG05209 [Caenorhabditis briggsae]
Length = 168
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 9/107 (8%)
Query: 63 APDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLN 122
A + F GVIP TE+++ Y+ SSGPGGQ+V +TKV+IRFKV+ A WL+
Sbjct: 21 ASSSVSFTGVIP---------TEKIEKRYTLSSGPGGQNVQKNATKVEIRFKVSEAEWLS 71
Query: 123 EDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
+ +K + E +R+N G LII SDRTR + LN+AD LR+ I+
Sbjct: 72 DSLKNSIEEKLSHRINSAGELIIDSDRTRERHLNVADCFDKLRSAIY 118
>gi|354466579|ref|XP_003495751.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Cricetulus griseus]
Length = 283
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP S G+ +P D + + IP+
Sbjct: 116 FQSIYSLDKLYPES---------------KGVDTAWKVPE---DAKQASSDIPL------ 151
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN VS+K ++RF + +A+W+ E V++++ +KN++NK G
Sbjct: 152 ---DRLSISYCRSSGPGGQNVNKVSSKAEVRFHLASADWIAEPVRQKIALKHKNKINKAG 208
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLA+ + +R+MI +A++ P ED + R+RI
Sbjct: 209 ELILTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPTKEDAQLQRLRI 257
>gi|224074711|ref|XP_002304436.1| predicted protein [Populus trichocarpa]
gi|222841868|gb|EEE79415.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 74/102 (72%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + ++++RS GPGGQ+VN V+TKVD+RF V A WL+E ++++++++ KNR+NKDG ++
Sbjct: 96 DHVTVSFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSERIRERIMQMEKNRINKDGEIV 155
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 156 ISSTKTRTQKGNIDDALAKLQAIIDVASYVPPPPSEEQKKKI 197
>gi|449283049|gb|EMC89752.1| Immature colon carcinoma transcript 1 protein, partial [Columba
livia]
Length = 144
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 70/100 (70%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIK 146
L ++YSRSSGPGGQHVN V+TK ++RF + +A+W+ E ++++ +++N++N+ G LI+
Sbjct: 15 LSVSYSRSSGPGGQHVNKVNTKAEVRFHLASADWIPEATREKMASMHRNKINRAGELIVS 74
Query: 147 SDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
S+ +R Q NLA + +R M+ +A + +S++T ++
Sbjct: 75 SEESRYQMRNLAICLEKIRTMVTEATEKPKVVSKETTQKL 114
>gi|432111325|gb|ELK34604.1| Cerebellar degeneration-related protein 2-like protein [Myotis
davidii]
Length = 511
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+ S SLDKLYP S + + PD D + N IP+
Sbjct: 344 HASIYSLDKLYPESR-----GSDTAWRVPD-------------DAKQANSDIPL------ 379
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ + KN++NK G
Sbjct: 380 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKMAIMYKNKINKLG 436
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDTI-DRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 437 ELILTSECSRYQLRNLADCLQKIRDMIAEASQTPKEPSKEDAVLQRIRI 485
>gi|440897653|gb|ELR49297.1| Peptidyl-tRNA hydrolase ICT1, mitochondrial [Bos grunniens mutus]
Length = 211
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 94/168 (55%), Gaps = 27/168 (16%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S+ SLDKLYP S G +P A G N IPV
Sbjct: 67 FRSAYSLDKLYPESR---------------GADTAWRVPGDAKQG---NDDIPV------ 102
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPG Q+VN V++K ++RF + +A+W+ E V +++ +K+++N+ G
Sbjct: 103 ---DGLTISYCRSSGPGSQNVNKVNSKAEVRFHLASADWIAEPVGQKMALTHKSKINRAG 159
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
LI+ S+ +R Q NLAD + +R+MI +A++PA + S++ ++R
Sbjct: 160 ELILTSECSRYQFRNLADCLQKIRDMIAEASQPATEPSKEDAALQKLR 207
>gi|426239283|ref|XP_004013555.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Ovis aries]
Length = 209
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +KN++N+ G LI
Sbjct: 78 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKMALTHKNKINRAGELI 137
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPA--PQISEDTIDRIRI 188
+ S+ +R Q NLAD + +R+MI +A++PA P + + ++RI
Sbjct: 138 LTSECSRYQFRNLADCLQKIRDMIAEASQPAMEPSKEDAALQKLRI 183
>gi|356563268|ref|XP_003549886.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Glycine max]
Length = 230
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 72/102 (70%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + ++++RS GPGGQ+VN V+TKVD+RF V A WL++ ++ ++++ KNR+NKDG L+
Sbjct: 97 DHVTVSFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSDRIRDKILQTEKNRINKDGELV 156
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 157 ISSTKTRTQKGNIEDALAKLQEIIDAASYVPPPPSEEQKKKI 198
>gi|157279227|gb|AAI34737.1| ICT1 protein [Bos taurus]
Length = 177
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 83/126 (65%), Gaps = 11/126 (8%)
Query: 65 DGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNED 124
D + N IPV + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E
Sbjct: 35 DAKQGNDDIPV---------DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEP 85
Query: 125 VKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED--T 182
V++++ +KN++N+ G LI+ S+ +R Q NLAD + +R+MI +A++PA + S++
Sbjct: 86 VRQKMALTHKNKINRAGELILTSEYSRYQFRNLADCLQKIRDMIAEASQPATEPSKEDAA 145
Query: 183 IDRIRI 188
+ ++RI
Sbjct: 146 LQKLRI 151
>gi|326514666|dbj|BAJ96320.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520732|dbj|BAJ92729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 229
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 72/102 (70%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + ++++RS G GGQ+VN V+TKVD+RF V A+WL E +K+++++ KNR+NKDG L+
Sbjct: 96 DHVTVSFARSGGAGGQNVNKVNTKVDMRFNVEKAHWLGERIKERILQTEKNRINKDGELV 155
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
+ S +TR+Q+ N+ DA+ ++ +I A+ P SE+ +I
Sbjct: 156 MSSTKTRTQKGNIEDALQKIQAIINAASYVPPPPSEEQKKKI 197
>gi|341883886|gb|EGT39821.1| hypothetical protein CAEBREN_04854 [Caenorhabditis brenneri]
Length = 168
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 9/101 (8%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
FNGVIP T++++ +S SSGPGGQ+V +TKV+IRFKV+ A+WL+E +K
Sbjct: 27 FNGVIP---------TDKIEKRFSLSSGPGGQNVQKNATKVEIRFKVSDADWLSEALKTS 77
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
+ E +R+N G LII SDRTR + LN+AD LR+ I+
Sbjct: 78 IEEKLAHRINSAGELIIDSDRTRERHLNVADCFDKLRSAIY 118
>gi|68565524|sp|Q8R035.1|ICT1_MOUSE RecName: Full=Peptidyl-tRNA hydrolase ICT1, mitochondrial; AltName:
Full=Immature colon carcinoma transcript 1 protein
homolog; Flags: Precursor
gi|20306641|gb|AAH28523.1| Ict1 protein [Mus musculus]
gi|148702539|gb|EDL34486.1| immature colon carcinoma transcript 1, isoform CRA_f [Mus musculus]
Length = 206
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 29/177 (16%)
Query: 14 QRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVI 73
R V ++S SLDKLYP S G +P A + I
Sbjct: 31 HRQVDGTTFQSIYSLDKLYPES---------------KGADTAWKVPEHAKQASSY---I 72
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P+ + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +
Sbjct: 73 PL---------DRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTH 123
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
KN++NK G L++ S+ +R Q NLA+ + +R+MI +A++ P ED + R+RI
Sbjct: 124 KNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPSKEDARLQRLRI 180
>gi|255537093|ref|XP_002509613.1| immature colon carcinoma transcript, putative [Ricinus communis]
gi|223549512|gb|EEF51000.1| immature colon carcinoma transcript, putative [Ricinus communis]
Length = 234
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 73/102 (71%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + ++++RS GPGGQ+VN V+TKVD+RF V A WL++ ++ +++++ KNR+NKDG ++
Sbjct: 101 DHVTVSFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRDRIMQMEKNRINKDGEIV 160
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 161 ISSTKTRTQKGNIEDALAKLQAIIDAASYVPPPPSEEQKKKI 202
>gi|4557657|ref|NP_001536.1| peptidyl-tRNA hydrolase ICT1, mitochondrial precursor [Homo
sapiens]
gi|6015033|sp|Q14197.1|ICT1_HUMAN RecName: Full=Peptidyl-tRNA hydrolase ICT1, mitochondrial; AltName:
Full=Digestion substraction 1; Short=DS-1; AltName:
Full=Immature colon carcinoma transcript 1 protein;
Flags: Precursor
gi|1045059|emb|CAA57387.1| ICT1 protein [Homo sapiens]
gi|15929832|gb|AAH15335.1| Immature colon carcinoma transcript 1 [Homo sapiens]
gi|30583061|gb|AAP35775.1| immature colon carcinoma transcript 1 [Homo sapiens]
gi|61359721|gb|AAX41758.1| immature colon carcinoma transcript 1 [synthetic construct]
gi|61359728|gb|AAX41759.1| immature colon carcinoma transcript 1 [synthetic construct]
gi|119609633|gb|EAW89227.1| immature colon carcinoma transcript 1 [Homo sapiens]
gi|123979504|gb|ABM81581.1| immature colon carcinoma transcript 1 [synthetic construct]
gi|123994317|gb|ABM84760.1| immature colon carcinoma transcript 1 [synthetic construct]
gi|189054308|dbj|BAG36828.1| unnamed protein product [Homo sapiens]
Length = 206
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + P+G K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQG-----SDTAWRVPNGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ +KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRI 180
>gi|12833859|dbj|BAB22691.1| unnamed protein product [Mus musculus]
Length = 170
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP S G +P A + IP+
Sbjct: 3 FQSIYSLDKLYPESK---------------GADTAWKVPEHAKQASSY---IPL------ 38
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +KN++NK G
Sbjct: 39 ---DRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAG 95
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
L++ S+ +R Q NLA+ + +R+MI +A++ P ED + R+RI
Sbjct: 96 ELVLTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPSKEDARLQRLRI 144
>gi|30585121|gb|AAP36833.1| Homo sapiens immature colon carcinoma transcript 1 [synthetic
construct]
gi|61369763|gb|AAX43387.1| immature colon carcinoma transcript 1 [synthetic construct]
gi|61369769|gb|AAX43388.1| immature colon carcinoma transcript 1 [synthetic construct]
Length = 207
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + P+G K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQG-----SDTAWRVPNGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ +KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRI 180
>gi|357113114|ref|XP_003558349.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Brachypodium distachyon]
Length = 224
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 71/102 (69%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS G GGQ+VN V+TKVD+RF V A+WL E +K+++++ KNR+NKDG L+
Sbjct: 91 DHVTLNFARSGGAGGQNVNKVNTKVDMRFNVEKAHWLGERIKERILQTEKNRINKDGELV 150
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
+ S +TR+Q+ N+ DA+ ++ +I AA P SE+ +I
Sbjct: 151 MSSTKTRTQKGNIEDALQKIQAIIDAAAYVPPPPSEEQKKKI 192
>gi|62896665|dbj|BAD96273.1| immature colon carcinoma transcript 1 variant [Homo sapiens]
Length = 206
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SLDKLYP S + + P+G K + + IP+
Sbjct: 39 FKSIYSLDKLYPESQG-----SDTAWRVPNGAK-------------QADSDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ +KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNRVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRI 180
>gi|291413482|ref|XP_002722994.1| PREDICTED: immature colon carcinoma transcript 1 [Oryctolagus
cuniculus]
Length = 207
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 87/160 (54%), Gaps = 27/160 (16%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
+KS SL+KLYP S G IP D + G IP+
Sbjct: 40 FKSVYSLEKLYPES---------------QGRDTAWRIP---EDAKQAGGDIPL------ 75
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQHVN V++K ++RF + A+W+ E V+ ++ +KN++N+ G
Sbjct: 76 ---DRLTISYCRSSGPGGQHVNKVNSKAEVRFHLATADWIAEPVRGKIAVTHKNKINRCG 132
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED 181
LI+ S+ +R Q NLAD + +R +I +A++ + S++
Sbjct: 133 ELIVTSESSRYQFRNLADCLRKIRALIAEASQTPEEPSKE 172
>gi|351707875|gb|EHB10794.1| Immature colon carcinoma transcript 1 protein [Heterocephalus
glaber]
Length = 206
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SLDKLYP S + K PD D + + IP+
Sbjct: 39 FQSIYSLDKLYPESK-----GSDTAWKIPD-------------DAKQASNDIPL------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++NK G
Sbjct: 75 ---DRLMISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIALMHKNKINKSG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+ +R Q NLAD + +R+MI +A++ P ED + R+RI
Sbjct: 132 ELILTSESSRYQFRNLADCLQKIRDMIAEASQVPKEPSKEDARLYRLRI 180
>gi|118099961|ref|XP_420117.2| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial isoform 2
[Gallus gallus]
Length = 194
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 29/174 (16%)
Query: 13 NQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGV 72
+QR ++S+ SLDKLYP D A D P +A FN
Sbjct: 20 SQRAATGSEFRSAYSLDKLYPPR---------DGGTASD--------PEEAKPAA-FN-- 59
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
IP+ + L ++YSRSSGPGGQ+VN V+TK ++RF + +A+W+ E V++++ +
Sbjct: 60 IPM---------DRLTVSYSRSSGPGGQNVNKVNTKAEVRFHLASADWIPEAVREKMASM 110
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
++N++N+ G LI+ S+ +R Q NLA + +R M+ +A + +S++T ++
Sbjct: 111 HRNKINRAGELIVNSEESRYQMRNLAICLEKIRVMVTEATEKPKVVSKETAQQL 164
>gi|328768611|gb|EGF78657.1| hypothetical protein BATDEDRAFT_13116 [Batrachochytrium
dendrobatidis JAM81]
Length = 115
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 70/105 (66%)
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ ++L + YSRSSGPGGQ+VN V+TKVDIRF V W+ + V ++++E N+ R+NK G
Sbjct: 8 FYIDKLSVQYSRSSGPGGQNVNKVNTKVDIRFTVYDMEWVPQPVVQRILEQNQGRMNKKG 67
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
L++ SDR R+Q +N D + + ++I A++ + S T+ R+
Sbjct: 68 ELVVTSDRFRTQHMNYNDCIDKIYDLIAAASQVSDGPSTSTLRRV 112
>gi|118378882|ref|XP_001022615.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
thermophila]
gi|89304382|gb|EAS02370.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
thermophila SB210]
Length = 196
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 61/93 (65%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E L+I YS+SSG GGQH+N ++K +IRF ++ A W+ +DVKK+L + +N+D YLI
Sbjct: 71 EHLEIRYSKSSGAGGQHINKTNSKAEIRFNIDTAKWIEDDVKKRLKSQYQQHINQDNYLI 130
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
++ R Q NL +A+ LR +IW+ + P +
Sbjct: 131 LQCQTGRDQDSNLREAIEKLRQIIWECSLPEKE 163
>gi|449479376|ref|XP_002190739.2| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Taeniopygia
guttata]
Length = 291
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 29/174 (16%)
Query: 13 NQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGV 72
QR Y+SS SLDKLYP P Q DG
Sbjct: 117 TQRAAAGTEYRSSHSLDKLYP----------PRQ------------------DGTAAR-T 147
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
+ P L ++YSRSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +
Sbjct: 148 AELQPPALDIPMARLTVSYSRSSGPGGQNVNKVNSKAEVRFHLASADWIPEAVRQKMALM 207
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
++N++N+ G LI+ S+ +R Q NLA + +R M+ +A + +S++T ++
Sbjct: 208 HRNKINRAGELIMTSEESRYQMRNLAICLEKIRTMVTEAIEKPKVVSKETAQKL 261
>gi|224124948|ref|XP_002329853.1| predicted protein [Populus trichocarpa]
gi|222871090|gb|EEF08221.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 72/101 (71%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+ ++++RS GPGGQ+VN V+TKVD+RF V A WL++ ++++++++ KNR+NKDG ++I
Sbjct: 94 HVTVSFARSGGPGGQNVNKVNTKVDMRFNVKKAYWLSDRIRERIMQMEKNRINKDGEIVI 153
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
S +TR+Q N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 154 SSTKTRTQTGNIDDALEKLQAVIDAASYVPPPPSEEQKKKI 194
>gi|430762063|ref|YP_007217920.1| Class I peptide chain release factor [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011687|gb|AGA34439.1| Class I peptide chain release factor [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 145
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V P F+ E+L+ Y RS+GPGGQHVN + V++RF+V L +++++L + +
Sbjct: 5 AVGPGFALPEEDLEFRYKRSTGPGGQHVNKTDSAVELRFRVQTCPALGSEIRERLCRIAR 64
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQI 178
R++++G LII + R RSQ+ N DA+ L ++ +A + PAP+I
Sbjct: 65 KRISREGVLIIHAQRFRSQERNREDALERLAELLREAERPPAPRI 109
>gi|115451915|ref|NP_001049558.1| Os03g0249200 [Oryza sativa Japonica Group]
gi|108707179|gb|ABF94974.1| Immature colon carcinoma transcript 1 protein precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113548029|dbj|BAF11472.1| Os03g0249200 [Oryza sativa Japonica Group]
gi|215697697|dbj|BAG91691.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 227
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 70/102 (68%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS G GGQ+VN V+TKVD+RF V A WL E +K+++++ KNR+NKDG L+
Sbjct: 94 DHVTLNFARSGGAGGQNVNKVNTKVDMRFNVKEAQWLGERIKERILQTEKNRINKDGELV 153
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ ++ +I A+ P SE+ ++
Sbjct: 154 ISSTKTRTQKGNIEDALQKIQAIIDAASYVPPPPSEEQKKKV 195
>gi|125585610|gb|EAZ26274.1| hypothetical protein OsJ_10143 [Oryza sativa Japonica Group]
Length = 223
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 70/102 (68%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS G GGQ+VN V+TKVD+RF V A WL E +K+++++ KNR+NKDG L+
Sbjct: 90 DHVTLNFARSGGAGGQNVNKVNTKVDMRFNVKEAQWLGERIKERILQTEKNRINKDGELV 149
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ ++ +I A+ P SE+ ++
Sbjct: 150 ISSTKTRTQKGNIEDALQKIQAIIDAASYVPPPPSEEQKKKV 191
>gi|125543123|gb|EAY89262.1| hypothetical protein OsI_10760 [Oryza sativa Indica Group]
Length = 223
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 70/102 (68%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS G GGQ+VN V+TKVD+RF V A WL E +K+++++ KNR+NKDG L+
Sbjct: 90 DHVTLNFARSGGAGGQNVNKVNTKVDMRFNVKEAQWLGERIKERILQTEKNRINKDGELV 149
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ ++ +I A+ P SE+ ++
Sbjct: 150 ISSTKTRTQKGNIEDALQKIQAIIDAASYVPPPPSEEQKKKV 191
>gi|116781168|gb|ABK21990.1| unknown [Picea sitchensis]
Length = 237
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 104/189 (55%), Gaps = 10/189 (5%)
Query: 1 MNTILSFH-KLISNQRNVVKRFYKSSISLDKL--YPNSSMLLKTPTPDQVKAPDGLKFNG 57
M I S H S +N+++ F +S L+ Y M K+ ++ A ++
Sbjct: 24 MGPIFSHHNSFSSTTQNMMRIFLRSGTRLEGNMDYRVHCMSSKSGAEGRMSA-RLVQMQQ 82
Query: 58 VIPVKAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNA 117
V+ + N IP V E + + ++RS GPGGQ+VN V+TKVD+RF V A
Sbjct: 83 VLEEAESRAVHANEPIPKVT------LEHVTVGFARSGGPGGQNVNKVNTKVDMRFNVMA 136
Query: 118 ANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
A+W+ ++++++++ KNR+N+DG +++ S ++R+Q+ N+ DA+ L+ +I AA P
Sbjct: 137 ADWIPLRIRERILQMEKNRINRDGEIVMSSTKSRTQKGNIEDALGKLQAIIDAAAYVPPP 196
Query: 178 ISEDTIDRI 186
++ I +I
Sbjct: 197 PTDQKIKKI 205
>gi|76779896|gb|AAI06218.1| LOC734168 protein [Xenopus laevis]
Length = 186
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 34/169 (20%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
Y+S+ SLD+LYP S L+T PD IPV
Sbjct: 24 YRSAYSLDRLYPGSD--LRTVAQGDQGEPD---------------------IPV------ 54
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y +SSGPGGQ+VN V+TK ++RF + +A+W+ +D ++++ KNR+N+ G
Sbjct: 55 ---DRLTISYCKSSGPGGQNVNKVNTKAEVRFHLASADWIPDDARQKISVQCKNRINRSG 111
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+++R Q NL+ + +R+++ A K P Q ED + R R+
Sbjct: 112 ELIVVSEQSRYQMENLSVCLEKIRSIVSDAMKRPKMQTKEDVDVRRARV 160
>gi|332260192|ref|XP_003279169.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Nomascus
leucogenys]
Length = 228
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G LI
Sbjct: 97 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINRLGELI 156
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 157 LTSESSRYQFRNLADCLQKIRDMIAEASQTPKEPTKEDVKLQRIRI 202
>gi|189526059|ref|XP_001922710.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Danio
rerio]
Length = 193
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++L ++YSRSSG GGQHVN V+TK ++RF V A+WL E +K Q++ +++R+NK G L
Sbjct: 62 DKLKVSYSRSSGAGGQHVNKVNTKAEVRFHVQTADWLPETLKSQILLKHQSRINKAGELF 121
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA----AKPAPQISE 180
++S+ +RSQ+ NL + + L +I +A A+P+P+ E
Sbjct: 122 VRSEISRSQRRNLQECVQKLTALIQEAEQQEAEPSPEDQE 161
>gi|62026292|gb|AAH92108.1| LOC733181 protein [Xenopus laevis]
Length = 185
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 34/169 (20%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
Y+S+ SLD+LYP S L+T PD IPV
Sbjct: 23 YRSAYSLDRLYPGSD--LRTVAQGDQGEPD---------------------IPV------ 53
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y +SSGPGGQ+VN V+TK ++RF + +A+W+ +D ++++ KNR+N+ G
Sbjct: 54 ---DRLTISYCKSSGPGGQNVNKVNTKAEVRFHLASADWIPDDARQKISVQCKNRINRSG 110
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
LI+ S+++R Q NL+ + +R+++ A K P Q ED + R R+
Sbjct: 111 ELIVVSEQSRYQMENLSVCLEKIRSIVSDAMKRPKMQTKEDVDVRRARV 159
>gi|159162526|pdb|1J26|A Chain A, Solution Structure Of A Putative Peptidyl-Trna Hydrolase
Domain In A Mouse Hypothetical Protein
Length = 112
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 81 SYI-TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
SYI + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +KN++NK
Sbjct: 15 SYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINK 74
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPA 175
G L++ S+ +R Q NLA+ + +R+MI +A+ P+
Sbjct: 75 AGELVLTSESSRYQFRNLAECLQKIRDMIAEASGPS 110
>gi|73965048|ref|XP_533118.2| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Canis lupus
familiaris]
Length = 161
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ ++N++NK G LI
Sbjct: 30 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHRNKINKSGELI 89
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT--IDRIRI 188
+ S+ +R Q NLAD + +R+MI KA++ A + S++ + R+RI
Sbjct: 90 LTSECSRYQFRNLADCLQKIRDMIAKASQTATEPSKEDALLHRLRI 135
>gi|19387848|ref|NP_081005.1| peptidyl-tRNA hydrolase ICT1, mitochondrial [Mus musculus]
gi|12833706|dbj|BAB22632.1| unnamed protein product [Mus musculus]
gi|148702534|gb|EDL34481.1| immature colon carcinoma transcript 1, isoform CRA_a [Mus musculus]
Length = 177
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 81 SYI-TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
SYI + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +KN++NK
Sbjct: 41 SYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINK 100
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
G L++ S+ +R Q NLA+ + +R+MI +A++ P ED + R+RI
Sbjct: 101 AGELVLTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPSKEDARLQRLRI 151
>gi|402901029|ref|XP_003913460.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial, partial
[Papio anubis]
Length = 144
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIK 146
L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ ++KN++N+ G LI+
Sbjct: 15 LTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAIMHKNKINRLGELILT 74
Query: 147 SDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 75 SESSRYQFRNLADCLQKIRDMIAEASETPKEPTKEDVKLQRIRI 118
>gi|326931066|ref|XP_003211657.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Meleagris gallopavo]
Length = 203
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 72/102 (70%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L ++YSRSSGPGGQ+VN V+TK ++RF + +A+W+ E V++++ +++N++N+ G LI
Sbjct: 72 DRLTVSYSRSSGPGGQNVNKVNTKAEVRFHLASADWIPEAVREKMASMHRNKINRAGELI 131
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
+ S+ +R Q NLA + +R M+ +A + +S++T ++
Sbjct: 132 VNSEESRYQMRNLAICLEKIRVMVTEATEKPKVVSKETAQQL 173
>gi|297837135|ref|XP_002886449.1| translation release factor [Arabidopsis lyrata subsp. lyrata]
gi|297332290|gb|EFH62708.1| translation release factor [Arabidopsis lyrata subsp. lyrata]
Length = 236
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 71/102 (69%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS GPGGQ+VN ++TKVD+RF V A WL++ +++++I KNR+NKDG L+
Sbjct: 102 DHVTLNFARSGGPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKIILKEKNRINKDGELV 161
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 162 ISSTKTRTQKGNIDDALEKLQAIINAASYVPPPPSEEQKKKI 203
>gi|290996718|ref|XP_002680929.1| predicted protein [Naegleria gruberi]
gi|284094551|gb|EFC48185.1| predicted protein [Naegleria gruberi]
Length = 130
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 9/103 (8%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
F+G IP E+L T+SRSSGPGGQ+VN V+TKVDIR V++A+W+ + VK++
Sbjct: 1 FDGYIP---------KEKLIATFSRSSGPGGQNVNKVNTKVDIRLHVDSADWIPDIVKER 51
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L EL N++NK+G II++ R+Q N+ DA+ L+ I +A
Sbjct: 52 LKELYANKINKEGEFIIQASSFRTQDQNMKDAIHRLKGYIAEA 94
>gi|149580382|ref|XP_001516100.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like,
partial [Ornithorhynchus anatinus]
Length = 144
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 74/103 (71%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIK 146
L ITYSRSSGPGGQ+VN V++K ++RF + +A+W+ E +++++ +NR+NK G LI+
Sbjct: 15 LTITYSRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPLRQKIAIEQRNRINKLGELIVN 74
Query: 147 SDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
S+ +R Q NLA+ + +R++I +A++ S++T ++ R+R
Sbjct: 75 SESSRYQLRNLAECLQKIRDIISQASQEPRAPSKETKEQHRLR 117
>gi|255602001|ref|XP_002537793.1| immature colon carcinoma transcript, putative [Ricinus communis]
gi|223515050|gb|EEF24590.1| immature colon carcinoma transcript, putative [Ricinus communis]
Length = 181
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 62/80 (77%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+ ++++RS GPGGQ+VN V+TKVD+RF V A WL++ ++ +++++ KNR+NKDG ++I
Sbjct: 102 HVTVSFARSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRDRIMQMEKNRINKDGEIVI 161
Query: 146 KSDRTRSQQLNLADAMTTLR 165
S +TR+Q+ N+ DA+ L+
Sbjct: 162 SSTKTRTQKGNIEDALAKLQ 181
>gi|350562426|ref|ZP_08931260.1| Class I peptide chain release factor [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349779368|gb|EGZ33714.1| Class I peptide chain release factor [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 145
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V P F E+L+ + RS+GPGGQHVN + V++RF+V+A L + + +L + +
Sbjct: 5 AVGPDFELPDEDLEFRFKRSTGPGGQHVNKTDSAVELRFRVHACAALKPETRDRLCRIAR 64
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQI 178
R++++G LII + R RSQ+ N DA+ L ++ +A + PAP+I
Sbjct: 65 KRISREGVLIIHAQRFRSQERNREDALARLAELLREAERPPAPRI 109
>gi|145326102|ref|NP_001077760.1| Class I peptide chain release factor [Arabidopsis thaliana]
gi|145326104|ref|NP_001077761.1| Class I peptide chain release factor [Arabidopsis thaliana]
gi|27754314|gb|AAO22610.1| unknown protein [Arabidopsis thaliana]
gi|28393873|gb|AAO42344.1| unknown protein [Arabidopsis thaliana]
gi|332195891|gb|AEE34012.1| Class I peptide chain release factor [Arabidopsis thaliana]
gi|332195892|gb|AEE34013.1| Class I peptide chain release factor [Arabidopsis thaliana]
Length = 236
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 69/98 (70%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSD 148
+ ++RS GPGGQ+VN ++TKVD+RF V A WL++ ++++++ KNR+NKDG L+I S
Sbjct: 106 LNFARSGGPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELVISST 165
Query: 149 RTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
+TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 166 KTRTQKGNIDDALEKLQAIIDAASYVPPPPSEEQKKKI 203
>gi|344291192|ref|XP_003417320.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Loxodonta africana]
Length = 206
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 29/169 (17%)
Query: 22 YKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFS 81
++S SL+KLYP S + PD D + N IP+
Sbjct: 39 FQSIYSLEKLYPESKG-----ADTAWRVPD-------------DAKQANNDIPI------ 74
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+ L I+Y RSSGPGGQ+VN V++K ++RF + A+W+ E V++++ +KN++N+ G
Sbjct: 75 ---DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATADWIAEPVRQKIAITHKNKINRAG 131
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP--APQISEDTIDRIRI 188
LI+ S+ +R Q NLA + +R+MI +A++ P + + RIRI
Sbjct: 132 ELILSSECSRYQFRNLAACLQKIRDMITEASQTPKMPSKEDAVLRRIRI 180
>gi|340375947|ref|XP_003386495.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Amphimedon queenslandica]
Length = 186
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 70/103 (67%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++LDI +SRSSGPGGQ+VN +STK ++RF V A+WL + VK++L E+ ++NK G +I
Sbjct: 57 DKLDIRFSRSSGPGGQNVNKLSTKAEVRFNVQEADWLPDRVKERLKEMFGTKINKLGEII 116
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
+ S R+Q NL DA+ L ++ +A++ + SE + RIR
Sbjct: 117 VTSQVYRTQYQNLEDAIKKLTKILEEASELPNEPSEAKLARIR 159
>gi|302838259|ref|XP_002950688.1| hypothetical protein VOLCADRAFT_104814 [Volvox carteri f.
nagariensis]
gi|300264237|gb|EFJ48434.1| hypothetical protein VOLCADRAFT_104814 [Volvox carteri f.
nagariensis]
Length = 233
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
+ +++I+++RSSG GGQ+VN V+TKVD+RF + A+W+ ++VK + +L KNR DG L
Sbjct: 98 SHDVEISFARSSGAGGQNVNKVNTKVDMRFDLGKASWVPDEVKDAIRQLEKNRFTSDGVL 157
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKAAKP-APQISE-DTIDRIR 187
+++S R R+Q NL DA+ L+ +I +A + P+ ++ +TI R++
Sbjct: 158 VMQSQRFRTQAQNLDDALAKLQEIIDRAVEHVTPKEADPETIKRVK 203
>gi|390340498|ref|XP_001198603.2| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 147
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 91 YSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRT 150
YSRS G GGQ+V V TKVD+RF V A WL ++V+++L KN++N G ++I S+RT
Sbjct: 21 YSRSGGAGGQNVQKVETKVDVRFLVATAEWLPQNVREKLQIQQKNKINSRGEMVIVSERT 80
Query: 151 RSQQLNLADAMTTLRNMIWKAAKPAPQISE--DTIDRIRI 188
RSQ N +D + +R+M+ +A + + SE + RIR+
Sbjct: 81 RSQIRNFSDCLQKIRDMVAEAERKPKEPSEKDKAVRRIRV 120
>gi|182677244|ref|YP_001831390.1| class I peptide chain release factor [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182633127|gb|ACB93901.1| Class I peptide chain release factor [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 140
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
PR S EL +++R+SGPGGQ+VN V + V +RF V + L+E VK++L L+ +R+
Sbjct: 8 PRLSIDEAELLFSFARASGPGGQNVNKVESAVQLRFDVYNSPSLDETVKERLSLLSGSRI 67
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQI 178
KDG L+I + RSQ+LN DA T L ++I A KP P+I
Sbjct: 68 TKDGILVIFAQNFRSQELNRQDAQTRLLDLIGAAGKKPKPRI 109
>gi|170750094|ref|YP_001756354.1| class I peptide chain release factor [Methylobacterium
radiotolerans JCM 2831]
gi|170656616|gb|ACB25671.1| Class I peptide chain release factor [Methylobacterium
radiotolerans JCM 2831]
Length = 143
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V PR + +E+++++ R+SG GGQ+VN V T V +R+ A+ ++E VK L L
Sbjct: 5 VTPRIAIDEDEIELSFMRASGAGGQNVNKVETAVQLRWAALASPAIDERVKANLARLAGR 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
R+ KDG L++ R R+Q+ N AD + L +++ +AAKP P I T
Sbjct: 65 RMTKDGVLVLAGQRHRTQERNRADVLQRLVDLVAEAAKPPPPIRRPT 111
>gi|46205823|ref|ZP_00048045.2| COG1186: Protein chain release factor B [Magnetospirillum
magnetotacticum MS-1]
Length = 153
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Query: 58 VIPVKAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNA 117
+I V A DG + GV P+ + +EL+ ++ R+SGPGGQ+VN +ST V +RF V
Sbjct: 1 MIAVTARDGRQ--GVALHCTPQIAIDEDELEESFVRASGPGGQNVNKLSTAVQLRFDVRR 58
Query: 118 ANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
+ L + V +L+ L RL DG L+I + R R+Q+ N ADA L M+ +AA P
Sbjct: 59 SRSLPDAVAVRLMRLAGRRLTGDGVLVITAQRFRTQERNRADARERLAAMVAEAAVP 115
>gi|390450504|ref|ZP_10236095.1| hypothetical protein A33O_13623 [Nitratireductor aquibiodomus RA22]
gi|389662407|gb|EIM73973.1| hypothetical protein A33O_13623 [Nitratireductor aquibiodomus RA22]
Length = 144
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 62/97 (63%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
+ +EL + RSSGPGGQ+VN V+T V +RF A L E V+++ + L +R KD
Sbjct: 13 TVFEDELQEQFIRSSGPGGQNVNKVATAVQLRFNARGARGLPERVRERALALAGSRATKD 72
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
G ++I++ R R+Q++N ADA L ++ +AA+P P+
Sbjct: 73 GDIVIEAGRFRTQEMNRADARDRLAELLSRAAEPPPK 109
>gi|299470020|emb|CBN79197.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 250
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 80 FSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
F + E +L ++++R+SG GGQ+VN VSTKV++RF V+ A WL DV+ +L K R+N
Sbjct: 114 FGEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMN 173
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPA 175
G L++ + R+Q+ N + A+ LR MI +A +PA
Sbjct: 174 NKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPA 210
>gi|77163959|ref|YP_342484.1| class I peptide chain release factor [Nitrosococcus oceani ATCC
19707]
gi|254435921|ref|ZP_05049428.1| hypothetical protein NOC27_2984 [Nitrosococcus oceani AFC27]
gi|76882273|gb|ABA56954.1| Class I peptide chain release factor [Nitrosococcus oceani ATCC
19707]
gi|207089032|gb|EDZ66304.1| hypothetical protein NOC27_2984 [Nitrosococcus oceani AFC27]
Length = 141
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V P EEL + +SGPGGQ+VN V+T V +RF + L EDV+++L++L
Sbjct: 3 TVTPHIQLREEELHFQFVLASGPGGQNVNKVATAVQLRFDAAHSPSLPEDVRQRLMKLAG 62
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
NRL K+G L+I + R RSQ+ N DA+ L ++ +AA KP P+
Sbjct: 63 NRLTKEGELLITAKRFRSQERNRQDAIKRLVALLQQAAEKPKPR 106
>gi|359788437|ref|ZP_09291414.1| hypothetical protein MAXJ12_03773 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255902|gb|EHK58795.1| hypothetical protein MAXJ12_03773 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 145
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
+I E EL + RSSGPGGQ+VN V+T V +RF A L E V+++ I L R KD
Sbjct: 14 FIGEDELVENFIRSSGPGGQNVNKVATAVQLRFDARNAPGLPERVRERTISLAGQRATKD 73
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
G ++I++ R R+Q+ N ADA L ++ KAA+P P+
Sbjct: 74 GVIVIEAGRFRTQEQNRADARARLTELVAKAAEPPPK 110
>gi|300115190|ref|YP_003761765.1| class I peptide chain release factor [Nitrosococcus watsonii C-113]
gi|299541127|gb|ADJ29444.1| Class I peptide chain release factor [Nitrosococcus watsonii C-113]
Length = 141
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V P EEL + +SGPGGQ+VN V+T V +RF ++ L EDV+++L++L
Sbjct: 3 TVTPHIQLKEEELHFQFVLASGPGGQNVNKVATAVQLRFDAAHSSSLPEDVRQRLMKLAG 62
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
NRL ++G L+I + R RSQ+ N DA+ L ++ +AA KP P+
Sbjct: 63 NRLTREGELLITAKRFRSQERNRQDAIKRLVVLLRQAAEKPKPR 106
>gi|394988209|ref|ZP_10381047.1| hypothetical protein SCD_00611 [Sulfuricella denitrificans skB26]
gi|393792667|dbj|GAB70686.1| hypothetical protein SCD_00611 [Sulfuricella denitrificans skB26]
Length = 138
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++ + R+SGPGGQ+VN VST V +RF V + L EDV+ +L++L NRL +G L+I
Sbjct: 14 EIELQFIRASGPGGQNVNKVSTAVQLRFDVARSPSLPEDVRARLMKLAGNRLTNEGVLLI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
++ R R+Q+ N DA+ L +I A KP P+I+
Sbjct: 74 EAKRHRTQERNRQDAIARLVELILHATEKPKPRIA 108
>gi|397620555|gb|EJK65778.1| hypothetical protein THAOC_13331 [Thalassiosira oceanica]
Length = 256
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 77 IPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+P I E EL IT++R+SG GGQ+VN V+TKV++RF + +A W+ +V+ +L N
Sbjct: 121 VPEHIAIPENELQITFARASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEAN 180
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+N +GY+ I S R+Q N DAM L++M+
Sbjct: 181 RINNEGYMSITSQEHRTQMQNRKDAMKKLQDMV 213
>gi|407778189|ref|ZP_11125454.1| hypothetical protein NA2_09453 [Nitratireductor pacificus pht-3B]
gi|407299870|gb|EKF18997.1| hypothetical protein NA2_09453 [Nitratireductor pacificus pht-3B]
Length = 144
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 61/93 (65%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL + RSSGPGGQ+VN V+T V +RF A L E V+ Q ++L +R K+G+++
Sbjct: 17 DELQEQFIRSSGPGGQNVNKVATAVQLRFDAANARGLPERVRVQALKLAGSRATKEGHIV 76
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
I++ R R+Q+ N +DA L +I +AA+P P+
Sbjct: 77 IEASRFRTQEQNRSDARDRLAELIARAAEPPPK 109
>gi|292491569|ref|YP_003527008.1| class I peptide chain release factor [Nitrosococcus halophilus Nc4]
gi|291580164|gb|ADE14621.1| Class I peptide chain release factor [Nitrosococcus halophilus Nc4]
Length = 142
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V P+ +EL + +SGPGGQ+VN V+T V +RF + L EDV+ +L++L N
Sbjct: 5 VTPQIQLKEDELHFQFILASGPGGQNVNKVATAVQLRFDAVHSRSLPEDVRSRLLKLAGN 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
RL K+G L+I + R R+Q+ N DA+ L ++ KAA KP P+
Sbjct: 65 RLTKEGELLITAKRFRTQERNRQDAIERLVALLQKAAEKPKPR 107
>gi|346473823|gb|AEO36756.1| hypothetical protein [Amblyomma maculatum]
Length = 198
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 9/106 (8%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
F G IP EL+I+YSRSSGPGGQ+VN V++KV+IRF + A+W+ +++
Sbjct: 58 FQGHIP---------EGELEISYSRSSGPGGQNVNKVNSKVEIRFHLETASWIPAAGRER 108
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
L + +NK G L++ + RSQ N + LR ++++A +P
Sbjct: 109 LKAQWSHLVNKRGQLVLSCEEQRSQHANTRICLEQLRALVFEACRP 154
>gi|407975414|ref|ZP_11156319.1| hypothetical protein NA8A_13929 [Nitratireductor indicus C115]
gi|407429042|gb|EKF41721.1| hypothetical protein NA8A_13929 [Nitratireductor indicus C115]
Length = 144
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 61/94 (64%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
+EL + R+SGPGGQ+VN V+T V +RF A L E V++Q ++L +R KDG +
Sbjct: 16 ADELQEQFIRASGPGGQNVNKVATAVQLRFNAALARGLPERVREQALKLAGSRATKDGEI 75
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+I++ R R+Q+ N ADA L ++ +A++P P+
Sbjct: 76 VIEAGRFRTQEQNRADARDRLAELLTRASEPPPK 109
>gi|148702537|gb|EDL34484.1| immature colon carcinoma transcript 1, isoform CRA_d [Mus musculus]
Length = 162
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 73/111 (65%), Gaps = 7/111 (6%)
Query: 81 SYI-TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
SYI + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V +Q I L +NK
Sbjct: 41 SYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPV-RQKIALT---INK 96
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
G L++ S+ +R Q NLA+ + +R+MI +A++ P ED + R+RI
Sbjct: 97 AGELVLTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPSKEDARLQRLRI 147
>gi|258542412|ref|YP_003187845.1| peptidyl-tRNA hydrolase domain protein [Acetobacter pasteurianus
IFO 3283-01]
gi|384042333|ref|YP_005481077.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-12]
gi|384050850|ref|YP_005477913.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-03]
gi|384053958|ref|YP_005487052.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-07]
gi|384057192|ref|YP_005489859.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-22]
gi|384059833|ref|YP_005498961.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-26]
gi|384063125|ref|YP_005483767.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-32]
gi|384119201|ref|YP_005501825.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256633490|dbj|BAH99465.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-01]
gi|256636549|dbj|BAI02518.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-03]
gi|256639602|dbj|BAI05564.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-07]
gi|256642658|dbj|BAI08613.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-22]
gi|256645713|dbj|BAI11661.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-26]
gi|256648766|dbj|BAI14707.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-32]
gi|256651819|dbj|BAI17753.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256654810|dbj|BAI20737.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus IFO 3283-12]
Length = 146
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 67 LKFNGVIPV-VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDV 125
+ + G++ + ++P S EL+++Y +SGPGGQ+VN V+T +RF ++ L + V
Sbjct: 1 MCYVGLMAISILPNISLADSELEVSYILASGPGGQNVNKVATAAQLRFDAAHSSSLPDRV 60
Query: 126 KKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+ +L+EL +R +DG ++I + R R+QQ N DA+ L +I +AA +PA +++
Sbjct: 61 RARLLELAGSRATRDGVIVITARRFRTQQRNREDAIERLAALIREAAHRPAFRVA 115
>gi|255087526|ref|XP_002505686.1| predicted protein [Micromonas sp. RCC299]
gi|226520956|gb|ACO66944.1| predicted protein [Micromonas sp. RCC299]
Length = 153
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVN-AANWLNEDVKKQLIELNKNR 136
P +++ I+++RS G GGQ+VN V+TKVD+R + A++WL+ V ++L+ L KNR
Sbjct: 10 PPRKVTKDDVTISFARSGGAGGQNVNKVNTKVDMRLHLERASDWLHPWVARRLMVLEKNR 69
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
+NKDG L+I+S R R+Q N+ DA+ ++ + +A+K Q + T
Sbjct: 70 VNKDGELVIQSSRFRTQSQNVDDALEKMQACLNRASKLPQQKANKT 115
>gi|397567470|gb|EJK45606.1| hypothetical protein THAOC_35768 [Thalassiosira oceanica]
Length = 256
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 77 IPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+P I E EL IT++R+SG GGQ+VN V+TKV++RF + +A W+ +V+ +L N
Sbjct: 121 VPEHIAIPENELQITFARASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEAN 180
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+N +GY+ I S R+Q N DAM L++++
Sbjct: 181 RINNEGYMSITSQEHRTQMQNRKDAMKKLQDIV 213
>gi|329113680|ref|ZP_08242455.1| PcaJ protein [Acetobacter pomorum DM001]
gi|326696943|gb|EGE48609.1| PcaJ protein [Acetobacter pomorum DM001]
Length = 140
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
++P S EL++TY +SGPGGQ+VN V+T +RF + L + V+ +L+EL +
Sbjct: 5 ILPNISLADSELEVTYILASGPGGQNVNKVATAAQLRFDAAHSASLPDRVRTRLLELAGS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
R +DG ++I + R R+QQ N DA+ L +I +AA +PA +++
Sbjct: 65 RATRDGVIVITARRFRTQQRNREDAVERLAALIREAAHRPAFRVA 109
>gi|326433344|gb|EGD78914.1| hypothetical protein PTSG_01889 [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
F G IP E L TYSRS G GGQHVN VSTKV +RF V+ A WL E+ K
Sbjct: 64 FYGPIP---------QEALTATYSRSGGAGGQHVNKVSTKVTLRFNVDEAYWLTEEAKAA 114
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
+ R+NK G L+++ TRSQ N A+ + M +A K + S +++
Sbjct: 115 IKTNLSTRMNKQGELVVQCQDTRSQNRNYDLAVQRMTEMCVEATKQDKEASAQQQAKVK 173
>gi|255537309|ref|XP_002509721.1| immature colon carcinoma transcript, putative [Ricinus communis]
gi|223549620|gb|EEF51108.1| immature colon carcinoma transcript, putative [Ricinus communis]
Length = 83
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 56/73 (76%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
I++ + ++++RS G GGQ+VN V+TKVD+RF V A WL + ++ +++++ KNR+NKDG
Sbjct: 3 ISDYVTVSFARSGGSGGQNVNKVNTKVDMRFNVKDAYWLTDRIRDRIMQMEKNRINKDGE 62
Query: 143 LIIKSDRTRSQQL 155
++I S +TR+Q+
Sbjct: 63 IVISSTKTRTQKC 75
>gi|121609257|ref|YP_997064.1| class I peptide chain release factor [Verminephrobacter eiseniae
EF01-2]
gi|121553897|gb|ABM58046.1| Class I peptide chain release factor [Verminephrobacter eiseniae
EF01-2]
Length = 146
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 70/110 (63%), Gaps = 7/110 (6%)
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
+P+ +P +E++IT R+ GPGGQ+VN VS+ + +RF V AA+ L EDVK++L+ L
Sbjct: 10 LPLQVP-----VQEVEITAVRAQGPGGQNVNKVSSAIHLRFDV-AASSLPEDVKQRLLAL 63
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
R+ ++G ++IK+ + RSQ+ N A A+ L ++ A P P++ T
Sbjct: 64 RDTRITQEGVVVIKARQYRSQEQNCAAALERLNTLVNSVALP-PRVRRAT 112
>gi|197104242|ref|YP_002129619.1| peptidyl-tRNA hydrolase domain-containing protein [Phenylobacterium
zucineum HLK1]
gi|196477662|gb|ACG77190.1| protein chain release factor B [Phenylobacterium zucineum HLK1]
Length = 140
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V P EE+ + R+SGPGGQHVN VST +++RF V A+ L E V+ +L L +
Sbjct: 4 VTPAIQIADEEVQLRAVRASGPGGQHVNKVSTAIELRFDVRASPSLPEPVRARLYGLAGS 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL DG L++ + RSQ+LN A+ L ++ +AA
Sbjct: 64 RLTMDGVLVLVAQEHRSQELNRQAAVERLIELVREAA 100
>gi|393765508|ref|ZP_10354070.1| class I peptide chain release factor [Methylobacterium sp. GXF4]
gi|392729090|gb|EIZ86393.1| class I peptide chain release factor [Methylobacterium sp. GXF4]
Length = 143
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 64/104 (61%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + +E+++++ R+SG GGQ+VN V T V +R+ + A+ +++ VK L +L RL
Sbjct: 8 RITIEDDEIELSFMRASGAGGQNVNKVETAVQLRWSILASPSVDDRVKANLYKLAGRRLT 67
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
KDG L++ R R+Q+ N AD + L ++ +AAKP P I T
Sbjct: 68 KDGVLVLSGQRHRTQERNRADVLQRLVELVTEAAKPPPPIRRAT 111
>gi|16125464|ref|NP_420028.1| hypothetical protein CC_1214 [Caulobacter crescentus CB15]
gi|221234209|ref|YP_002516645.1| peptidyl-tRNA hydrolase domain-containing protein [Caulobacter
crescentus NA1000]
gi|13422540|gb|AAK23196.1| peptidyl-tRNA hydrolase [Caulobacter crescentus CB15]
gi|220963381|gb|ACL94737.1| peptidyl-tRNA hydrolase family protein [Caulobacter crescentus
NA1000]
Length = 143
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 73 IPVVIPRFSYIT-EELDITY--SRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQL 129
+P +I S++ +E D+ + +R+SGPGGQHVN ST +++RF V + +L +DVK +L
Sbjct: 1 MPAMIEITSWLRIDEDDLIWKATRASGPGGQHVNKTSTAIELRFDVRNSPYLPDDVKDRL 60
Query: 130 IELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
L +R+ +DG L++ + +RSQ++N DA+ L ++I +A KP P+
Sbjct: 61 TALAGSRMTQDGVLVLFAQGSRSQEMNRQDALDRLIDLIRRATEKPKPR 109
>gi|154244289|ref|YP_001415247.1| class I peptide chain release factor [Xanthobacter autotrophicus
Py2]
gi|154158374|gb|ABS65590.1| Class I peptide chain release factor [Xanthobacter autotrophicus
Py2]
Length = 140
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 61/101 (60%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ PR + +E+++ + R+SGPGGQ+VN VS+ V +RF + L E VK +L+ L
Sbjct: 4 ITPRIAISEDEIELAFVRASGPGGQNVNKVSSAVQLRFDAAHSPNLPEGVKHRLVRLAGK 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+ + G +II++ R R+Q+ N DA+ L +I A AP
Sbjct: 64 RMTQGGVIIIQAQRFRTQERNREDAVARLVELIRSATIVAP 104
>gi|146328176|emb|CAM58093.1| protein chain release factor B [uncultured marine microorganism]
Length = 138
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 59/87 (67%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++++ RS G GGQ+VN VST + IRF V A+ L++ K++++ L R++K+G ++
Sbjct: 13 QEIEVSAIRSRGAGGQNVNKVSTAIHIRFDVRASTALSDHDKRRVLRLRDQRISKEGVIV 72
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
IK+ R RSQ N +DA+ L MI KA
Sbjct: 73 IKAQRFRSQDKNRSDALEKLAEMIRKA 99
>gi|429769498|ref|ZP_19301604.1| peptidyl-tRNA hydrolase domain protein [Brevundimonas diminuta
470-4]
gi|429186923|gb|EKY27851.1| peptidyl-tRNA hydrolase domain protein [Brevundimonas diminuta
470-4]
Length = 133
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL+ + R+ GPGGQ+VN VST V +RF V + L E VK +L++L +RL DG ++
Sbjct: 7 DELEFRFFRAGGPGGQNVNKVSTAVQMRFDVKNSPSLTEPVKARLMKLAGSRLTLDGVIV 66
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
I + R R+Q+ N ADA+ L M+ +A+
Sbjct: 67 ISAVRFRTQERNKADAIERLETMVAEAS 94
>gi|357384545|ref|YP_004899269.1| hypothetical protein [Pelagibacterium halotolerans B2]
gi|351593182|gb|AEQ51519.1| hypothetical protein YaeJ with similarity to translation release
factor [Pelagibacterium halotolerans B2]
Length = 143
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++++ RSSGPGGQ+VN V+T V +RF A+ L + V+ +LI +R KDG +++
Sbjct: 17 EVELSFVRSSGPGGQNVNKVATAVQLRFDAAASRSLPDAVRTRLIAQAGSRATKDGVIVL 76
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+DR R+Q LN DA+ L MI A +
Sbjct: 77 TADRHRTQPLNREDAINRLAEMIRAATQ 104
>gi|406961664|gb|EKD88307.1| class I peptide chain release factor [uncultured bacterium]
Length = 141
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EEL + RS+GPGGQ+VN V+T +RF V + L E +K++LI+L +R+ DG L+
Sbjct: 13 EELHFDFIRSAGPGGQNVNKVATACQLRFDVRLSTSLPELIKERLIKLAGSRMTDDGVLV 72
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
+++ R R+Q+ N ADA+ L +I KA
Sbjct: 73 LEAKRYRTQEQNRADAILRLTALIQKA 99
>gi|407940000|ref|YP_006855641.1| class I peptide chain release factor [Acidovorax sp. KKS102]
gi|407897794|gb|AFU47003.1| class I peptide chain release factor [Acidovorax sp. KKS102]
Length = 137
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++IT R+ G GGQ+VN VS+ V +RF V AA+ L E VK++L+ L R+ +DG ++
Sbjct: 11 DEVEITAMRAQGAGGQNVNKVSSAVHLRFDV-AASSLPEGVKERLLALRDTRITQDGVVV 69
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
IK+ + RSQ+LN ADA+ L ++ A P P++ T
Sbjct: 70 IKAQQYRSQELNRADALERLNALVNSVAVP-PRVRRAT 106
>gi|431931671|ref|YP_007244717.1| protein chain release factor B [Thioflavicoccus mobilis 8321]
gi|431829974|gb|AGA91087.1| protein chain release factor B [Thioflavicoccus mobilis 8321]
Length = 139
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P+ + +L+ + RS GPGGQ+VN V+T V +RF + + L EDV+++L+ L
Sbjct: 4 ITPKIALDERDLEERFVRSPGPGGQNVNKVATAVQLRFALRGFSTLPEDVRRRLVRLAGR 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQ 177
R+ D L I++ R R+++ N ADA+ L +I +A++ PAP+
Sbjct: 64 RVGNDEVLTIEAHRFRTRERNRADALERLVELIRRASRAPAPR 106
>gi|329890908|ref|ZP_08269251.1| RF-1 domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846209|gb|EGF95773.1| RF-1 domain protein [Brevundimonas diminuta ATCC 11568]
Length = 133
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL+ + R+ GPGGQ+VN VST V +RF V + L E VK +L++L +RL DG ++
Sbjct: 7 DELEFRFFRAGGPGGQNVNKVSTAVQMRFNVKNSPSLTEPVKARLMKLAGSRLTLDGVIV 66
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
I + R R+Q+ N ADA+ L M+ +A+
Sbjct: 67 ISAVRFRTQERNKADAVERLEAMVAEAS 94
>gi|295690045|ref|YP_003593738.1| class I peptide chain release factor [Caulobacter segnis ATCC
21756]
gi|295431948|gb|ADG11120.1| Class I peptide chain release factor [Caulobacter segnis ATCC
21756]
Length = 141
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL +R+SGPGGQHVN ST +++RF V + L EDVK +L +L +RL +DG LI
Sbjct: 14 DELVWKATRASGPGGQHVNKTSTALELRFDVRNSPSLPEDVKARLEKLAGSRLTQDGVLI 73
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
+ + +RSQ++N DA L ++I +A KP P+
Sbjct: 74 LFAQGSRSQEMNRQDAQARLVDLIRRATEKPKPR 107
>gi|421854090|ref|ZP_16286721.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371477628|dbj|GAB31924.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 166
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 67 LKFNGVIPV-VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDV 125
+ + G++ + ++P S EL+++Y +SGPGGQ+VN V+T +RF ++ L + V
Sbjct: 21 MCYVGLMAISILPNISLTDSELEVSYILASGPGGQNVNKVATAAQLRFDAAHSSSLPDRV 80
Query: 126 KKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+ +L+EL +R +DG ++I + R R+QQ N DA+ L +I +AA +PA +++
Sbjct: 81 RARLLELAGSRATRDGVIVITARRFRTQQRNREDAIERLAALIREAAHRPAFRVA 135
>gi|421849841|ref|ZP_16282814.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus NBRC 101655]
gi|371459357|dbj|GAB28017.1| translation peptide chain release factor Class I [Acetobacter
pasteurianus NBRC 101655]
Length = 166
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 67 LKFNGVIPV-VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDV 125
+ + G++ + ++P S EL+++Y +SGPGGQ+VN V+T +RF ++ L + V
Sbjct: 21 MCYVGLMAISILPNISLADSELEVSYILASGPGGQNVNKVATAAQLRFDAAHSSSLPDRV 80
Query: 126 KKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+ +L+EL +R +DG ++I + R R+QQ N DA+ L +I +AA +PA +++
Sbjct: 81 RARLLELAGSRATRDGVIVITARRFRTQQRNREDAIERLAALIREAAHRPAFRVA 135
>gi|288958700|ref|YP_003449041.1| hypothetical protein AZL_018590 [Azospirillum sp. B510]
gi|288911008|dbj|BAI72497.1| hypothetical protein AZL_018590 [Azospirillum sp. B510]
Length = 140
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 56/97 (57%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V PR S EL + R+SGPGGQHVN T V +RF V + L + V+ +L L +
Sbjct: 4 VTPRISLDESELQEEFVRASGPGGQHVNKTETAVQLRFDVRRSPNLPDPVRYRLERLAGS 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL +DG LI+ +DR RSQ N DA L ++I AA
Sbjct: 64 RLTQDGVLILVADRHRSQMRNREDARERLIDLIRDAA 100
>gi|88810329|ref|ZP_01125586.1| Protein chain release factor B [Nitrococcus mobilis Nb-231]
gi|88791959|gb|EAR23069.1| Protein chain release factor B [Nitrococcus mobilis Nb-231]
Length = 137
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R E+DIT R+ GPGGQ+VN V+T + +RF + A++ L E + +L+ LN R+
Sbjct: 7 RIQIPDHEIDITAIRAQGPGGQNVNKVATGIHLRFDIRASS-LPERYQTRLLALNDQRIT 65
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+G ++IK+ R RSQ+ N DA+ LR++I P
Sbjct: 66 KEGVVVIKAQRRRSQEGNREDALNRLRDLIQSVMVP 101
>gi|329907964|ref|ZP_08274745.1| Hypothetical protein YaeJ with translation release factor-like
protein [Oxalobacteraceae bacterium IMCC9480]
gi|327546853|gb|EGF31776.1| Hypothetical protein YaeJ with translation release factor-like
protein [Oxalobacteraceae bacterium IMCC9480]
Length = 138
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ GPGGQ+VN V+T + +RF +NA++ L E +++L+ LN R+ +DG +II
Sbjct: 15 EIELTAIRAQGPGGQNVNKVATAIHLRFNINASS-LPEYCRERLLALNDQRITRDGVIII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQQ + A+A+ L+ +I +A
Sbjct: 74 KAQHGRSQQQSKAEALRRLQELIQQA 99
>gi|262274222|ref|ZP_06052034.1| class I peptide chain release factor [Grimontia hollisae CIP
101886]
gi|262222032|gb|EEY73345.1| class I peptide chain release factor [Grimontia hollisae CIP
101886]
Length = 137
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+D++Y R+ G GGQHVN VS+ V +RF +NA++ L E K++L+ L +RL+KDG ++
Sbjct: 13 DEIDLSYIRAQGAGGQHVNKVSSAVHLRFDINASS-LPEFYKERLLALKDSRLSKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
IK+ + R+Q+ N DA+ L+ ++
Sbjct: 72 IKAQQFRTQEKNREDALQRLQALV 95
>gi|433771785|ref|YP_007302252.1| protein chain release factor B [Mesorhizobium australicum WSM2073]
gi|433663800|gb|AGB42876.1| protein chain release factor B [Mesorhizobium australicum WSM2073]
Length = 145
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L + RSSGPGGQ+VN V+T V +RF A L++ V+++ I+L R KDG ++I
Sbjct: 19 DLHEDFIRSSGPGGQNVNKVATAVQLRFDARNAEGLSDRVRERTIKLAGQRATKDGVIVI 78
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++ R R+Q+ N ADA T L ++ KAA+
Sbjct: 79 EAGRFRTQEQNRADARTRLAALVAKAAE 106
>gi|144898361|emb|CAM75225.1| Protein chain release factor B [Magnetospirillum gryphiswaldense
MSR-1]
Length = 141
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 72 VIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
+IP+ R + E+ ++ RSSGPGGQ+VN V T V++RF V + L +DVK +L
Sbjct: 1 MIPIT-RRIAIDEREISESFCRSSGPGGQNVNKVETAVELRFDVRNSPSLPDDVKARLER 59
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
L RL DG LII + RSQ+ N A+A+ L +I +AA
Sbjct: 60 LAGRRLTLDGVLIITAQEHRSQERNRAEALGKLVELIREAA 100
>gi|281209414|gb|EFA83582.1| hypothetical protein PPL_02648 [Polysphondylium pallidum PN500]
Length = 1045
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
+ + +PR E++D +SRSSG GGQ+VN V+TKV+ RF ++ A+WL+E + L
Sbjct: 44 VKIHVPR-----EKIDFQFSRSSGAGGQNVNKVNTKVEARFNLDNADWLSEHCRDTLRMQ 98
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ DG +I S + R Q+LN++D + L ++ KA+
Sbjct: 99 YAKNITSDGEFVINSSKHREQKLNVSDVIEKLEKIVTKAS 138
>gi|390949217|ref|YP_006412976.1| protein chain release factor B [Thiocystis violascens DSM 198]
gi|390425786|gb|AFL72851.1| protein chain release factor B [Thiocystis violascens DSM 198]
Length = 140
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++RS GPGGQ+VN V T V +RF V + L EDV+++L+ L R++ G L+I
Sbjct: 14 ELWEQFTRSPGPGGQNVNKVETAVQLRFDVAGSPSLPEDVRQRLLRLGGRRVDSSGVLMI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
++ R R+++ N ADA L +I +AA +P P+I+
Sbjct: 74 EAHRFRTRERNRADARERLAALILQAAHRPKPRIA 108
>gi|357024846|ref|ZP_09086983.1| hypothetical protein MEA186_08995 [Mesorhizobium amorphae
CCNWGS0123]
gi|355543246|gb|EHH12385.1| hypothetical protein MEA186_08995 [Mesorhizobium amorphae
CCNWGS0123]
Length = 191
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L + RSSGPGGQ+VN V+T V +RF A L+E V+++ I+L R KDG ++I
Sbjct: 65 DLHEDFIRSSGPGGQNVNKVATAVQLRFDAANAQGLSERVRERTIKLAGQRATKDGVVVI 124
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++ R R+Q+ N ADA L ++ KAA+
Sbjct: 125 EAGRFRTQEQNRADARARLTALVAKAAE 152
>gi|217979811|ref|YP_002363958.1| class I peptide chain release factor [Methylocella silvestris BL2]
gi|217505187|gb|ACK52596.1| Class I peptide chain release factor [Methylocella silvestris BL2]
Length = 140
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+ ++Y+R+SGPGGQ+VN V T +RF V + L VK++L+ L R KDG ++
Sbjct: 15 DEIALSYARASGPGGQNVNKVETAALLRFDVANSPSLEAPVKRRLLRLAGARATKDGAIV 74
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
I + RSQ++N DA+ L +I AAKP
Sbjct: 75 IFAQSFRSQEMNRKDAIGRLLALIAGAAKP 104
>gi|384496544|gb|EIE87035.1| hypothetical protein RO3G_11746 [Rhizopus delemar RA 99-880]
Length = 149
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E + I +SRSSGPGGQ+VN V+TKVD+R + A W+ + K +L + + +K+ LI
Sbjct: 45 EHVTIAFSRSSGPGGQNVNKVNTKVDLRLSLPKATWIPDYAKTKLRSTSSIKKSKNDELI 104
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
I SD+TRSQ N+ D L +I +A + E T++R+R
Sbjct: 105 ITSDKTRSQAKNIKDCYDKLVCVIKEAVAVQKEPDEMTLERVR 147
>gi|337264925|ref|YP_004608980.1| Class I peptide chain release factor [Mesorhizobium opportunistum
WSM2075]
gi|336025235|gb|AEH84886.1| Class I peptide chain release factor [Mesorhizobium opportunistum
WSM2075]
Length = 145
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L + RSSGPGGQ+VN V+T V +RF A L+E V+ + I+L R KDG ++I
Sbjct: 19 DLHEDFIRSSGPGGQNVNKVATAVQLRFDAQNAAGLSERVRARTIKLAGQRATKDGVIVI 78
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++ R R+Q+ N ADA L ++ KAA+
Sbjct: 79 EAGRFRTQEQNRADARARLTALVAKAAE 106
>gi|399018922|ref|ZP_10721073.1| protein chain release factor B [Herbaspirillum sp. CF444]
gi|398098852|gb|EJL89131.1| protein chain release factor B [Herbaspirillum sp. CF444]
Length = 140
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Query: 82 YIT-EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
YI EE+++T R+ G GGQ+VN VS+ + +RF + A++ L +DVK++L+ L +R++K+
Sbjct: 12 YIADEEVELTAIRAQGAGGQNVNKVSSAIHLRFDIRASS-LPDDVKQRLLALRDHRISKE 70
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G +IIK+ RSQ+ N ADA+ L+ M+ A+
Sbjct: 71 GVVIIKAQAYRSQEKNKADALQRLQEMLALVAR 103
>gi|194336150|ref|YP_002017944.1| peptidyl-tRNA hydrolase domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194308627|gb|ACF43327.1| Class I peptide chain release factor [Pelodictyon
phaeoclathratiforme BU-1]
Length = 137
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+++ R+ G GGQ+VN V T V +RF V A++ L ED +++L+ L +R+ KDG +I
Sbjct: 13 EEIELQTMRAQGAGGQNVNKVETAVHLRFDVKASS-LPEDFREKLLLLKDHRMTKDGVII 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
IK+ R RSQ+ N DA+ L+ ++ A P
Sbjct: 72 IKAQRYRSQEKNRTDALMRLQALLQHVALP 101
>gi|431802529|ref|YP_007229432.1| hypothetical protein B479_12965 [Pseudomonas putida HB3267]
gi|430793294|gb|AGA73489.1| hypothetical protein B479_12965 [Pseudomonas putida HB3267]
Length = 137
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L NR+ DG LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDITASS-LPEFYKERLLALRDNRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALARLAELIINAGK 100
>gi|347820646|ref|ZP_08874080.1| class I peptide chain release factor [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 140
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 77 IPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNR 136
+P EE++I+ R+ G GGQ+VN VS+ V +RF V AA+ L +DVK++L+ L R
Sbjct: 4 LPPLQVSEEEVEISAMRAQGAGGQNVNKVSSAVHLRFDV-AASSLPDDVKQRLLALRDTR 62
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
+ ++G ++IK+ R RSQ+ N ADA+ L ++
Sbjct: 63 ITQEGVVVIKAQRYRSQEQNRADALERLNALVG 95
>gi|89900179|ref|YP_522650.1| class I peptide chain release factor [Rhodoferax ferrireducens
T118]
gi|89344916|gb|ABD69119.1| Class I peptide chain release factor [Rhodoferax ferrireducens
T118]
Length = 141
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P P E++++ R+ G GGQ+VN VS+ + +RF + AA+ L +DVK++L+ L+
Sbjct: 4 PAASPLLQINEAEVELSAIRAQGAGGQNVNKVSSAIHLRFDI-AASSLPQDVKERLLALH 62
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+R+ KDG L+IK+ + R+Q++N DA+ L ++
Sbjct: 63 DSRITKDGVLVIKAQQQRTQEMNRLDALMRLHELV 97
>gi|163797046|ref|ZP_02191002.1| Class I peptide chain release factor [alpha proteobacterium BAL199]
gi|159177793|gb|EDP62344.1| Class I peptide chain release factor [alpha proteobacterium BAL199]
Length = 141
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++T+ RS GPGGQ+VN VST V +RF + L VK +L L ++L KDG ++
Sbjct: 13 DEIELTFIRSGGPGGQNVNKVSTAVQLRFDARGSPSLPSHVKARLERLAGSKLTKDGAIV 72
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ ++R R+Q N DA+ L MI +AA
Sbjct: 73 LTANRHRTQLANREDAVERLAEMIRQAA 100
>gi|91776424|ref|YP_546180.1| class I peptide chain release factor [Methylobacillus flagellatus
KT]
gi|91710411|gb|ABE50339.1| Class I peptide chain release factor [Methylobacillus flagellatus
KT]
Length = 138
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 77 IPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNR 136
+P +E+ +T R+ G GGQ+VN VS+ + +R+ V A++ L E +K +L+ L +R
Sbjct: 3 LPELYPAPDEITLTAVRAQGAGGQNVNKVSSAIHLRYDVKASS-LPEVIKARLLRLRDHR 61
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQIS 179
+ KDG +IIK+ RSQ+LN ADA+ L ++ A+ PA +I+
Sbjct: 62 ITKDGVIIIKAQLHRSQELNRADALARLHELVNSVARIPAARIA 105
>gi|254419956|ref|ZP_05033680.1| hypothetical protein BBAL3_2266 [Brevundimonas sp. BAL3]
gi|196186133|gb|EDX81109.1| hypothetical protein BBAL3_2266 [Brevundimonas sp. BAL3]
Length = 133
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 59/88 (67%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL+ + R+ GPGGQ+VN VST V +RF V + L E VK +L++L +RL +G ++
Sbjct: 7 DELEFHFYRAGGPGGQNVNKVSTAVQMRFDVKNSPSLTEPVKARLMKLAGSRLTLEGVIL 66
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
I + R R+Q+ N ADAM L+ ++ +A+
Sbjct: 67 ITAVRHRTQERNRADAMERLQALVDEAS 94
>gi|428672270|gb|EKX73184.1| conserved hypothetical protein [Babesia equi]
Length = 160
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 79 RFSYIT---EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
RFS I ++L T SRSSGPGGQ VN TKV IRF V A+WL +DVK + +NK
Sbjct: 16 RFSSINIPLKKLQTTTSRSSGPGGQSVNKSETKVQIRFNVKTADWLTQDVKDNFLIVNKA 75
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
+L + G I+ SD +Q N + + + I +A + P I + ++++
Sbjct: 76 KLTQKGDFIVSSDEFSNQGDNKKACIQKIEDAIHQAKEYKPIIQQTFLEQME 127
>gi|430743874|ref|YP_007203003.1| protein chain release factor B [Singulisphaera acidiphila DSM
18658]
gi|430015594|gb|AGA27308.1| protein chain release factor B [Singulisphaera acidiphila DSM
18658]
Length = 139
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R S E SRS GPGGQ+VN V++KV +R+ + L E V+ +L+ +RL
Sbjct: 7 RISIPLAEFQFDVSRSGGPGGQNVNKVNSKVLLRWSPATSPSLPEPVRARLLAALTSRLT 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQI 178
++G L++ S RTR Q NLAD + +R +I AA P P+I
Sbjct: 67 REGELLVSSQRTRDQSRNLADCLAKVRELILAAATP-PKI 105
>gi|319780217|ref|YP_004139693.1| class I peptide chain release factor [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166105|gb|ADV09643.1| Class I peptide chain release factor [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 145
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 57/88 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L + RSSGPGGQ+VN V+T V +RF A L+E V+++ I+L R KDG ++I
Sbjct: 19 DLHEDFIRSSGPGGQNVNKVATAVQLRFDAANAAGLSERVRERTIKLAGQRATKDGVVVI 78
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++ R R+Q+ N ADA L ++ KAA+
Sbjct: 79 EAGRFRTQEQNRADARARLTALVAKAAE 106
>gi|312602468|ref|YP_004022313.1| peptidyl-tRNA hydrolase family protein [Burkholderia rhizoxinica
HKI 454]
gi|312169782|emb|CBW76794.1| Peptidyl-tRNA hydrolase family protein [Burkholderia rhizoxinica
HKI 454]
Length = 133
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+ +T R+ G GGQ+VN VS+ + +RF + +++ L E VK +L+ LN NR+ +DG ++
Sbjct: 9 QEITMTAVRAQGAGGQNVNKVSSAIHLRFSIRSSS-LPEVVKMRLLALNDNRITRDGVIV 67
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
IK+ R+Q+LN A+A+ L +I +A P
Sbjct: 68 IKAQSYRTQELNRAEALARLHELIERANTP 97
>gi|121593985|ref|YP_985881.1| class I peptide chain release factor [Acidovorax sp. JS42]
gi|222111293|ref|YP_002553557.1| class I peptide chain release factor [Acidovorax ebreus TPSY]
gi|120606065|gb|ABM41805.1| Class I peptide chain release factor [Acidovorax sp. JS42]
gi|221730737|gb|ACM33557.1| Class I peptide chain release factor [Acidovorax ebreus TPSY]
Length = 141
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + AA+ L EDVK++L+ L +R+ + G L+I
Sbjct: 16 EVELTAMRAQGAGGQNVNKVSSAVHLRFDI-AASSLPEDVKQRLLALRDSRITQQGVLVI 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+ + R+Q+ N DA+ L+ ++ A+P P++ T
Sbjct: 75 KAQQYRTQEANRLDALARLQALVDSVARP-PRVRRAT 110
>gi|158426199|ref|YP_001527491.1| hypothetical protein AZC_4575 [Azorhizobium caulinodans ORS 571]
gi|158333088|dbj|BAF90573.1| hypothetical protein AZC_4575 [Azorhizobium caulinodans ORS 571]
Length = 140
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R EE+ +++ R+SGPGGQ+VN VST V +RF + + L E VK + L +
Sbjct: 4 ITARIRIPEEEILLSFVRASGPGGQNVNKVSTAVQLRFDLMGSPSLPEGVKLRAATLAGS 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
RL KDG L++++ R R+Q+ N DA+ L ++ A AP+
Sbjct: 64 RLTKDGVLVLQAQRFRTQERNREDAIERLVELLRAATIVAPK 105
>gi|241764161|ref|ZP_04762196.1| Class I peptide chain release factor [Acidovorax delafieldii 2AN]
gi|241366498|gb|EER60998.1| Class I peptide chain release factor [Acidovorax delafieldii 2AN]
Length = 135
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ T R+ G GGQ+VN VS+ V +RF V A++ L DVK++L+ L R+ +DG ++I
Sbjct: 12 EVEFTAMRAQGAGGQNVNKVSSAVHLRFDVGASS-LPADVKERLLALRDTRITQDGVVVI 70
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ + RSQ+ N ADA+ L ++ A+P
Sbjct: 71 KAQQYRSQEQNRADALARLNALVQSVAQP 99
>gi|118589873|ref|ZP_01547277.1| hypothetical protein SIAM614_14450 [Stappia aggregata IAM 12614]
gi|118437370|gb|EAV44007.1| hypothetical protein SIAM614_14450 [Stappia aggregata IAM 12614]
Length = 153
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V R + E+L + R+SGPGGQ+VN VST V +RF + + L EDVK + L
Sbjct: 15 AVTGRLFILKEDLTEDFIRASGPGGQNVNKVSTAVQLRFDLAGNDTLPEDVKARAARLAG 74
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
+RL G +++++DR R+++ N DA+ L +++ KA KP P+
Sbjct: 75 SRLTLGGEIVLQADRFRTRERNREDALERLLDLLRKATEKPKPR 118
>gi|114569792|ref|YP_756472.1| class I peptide chain release factor [Maricaulis maris MCS10]
gi|114340254|gb|ABI65534.1| Class I peptide chain release factor [Maricaulis maris MCS10]
Length = 139
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+SGPGGQHVN + V +RF + A L + K++L+ L +R+ KDG L++
Sbjct: 13 EIEERFIRASGPGGQHVNKTESAVQLRFDLAANTTLPDAAKRRLVRLAGSRMTKDGSLVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+D R ++ N +DA LR +I +A
Sbjct: 73 KADSHRERERNRSDARDRLRKLIEQA 98
>gi|302381288|ref|YP_003817111.1| class I peptide chain release factor [Brevundimonas subvibrioides
ATCC 15264]
gi|302191916|gb|ADK99487.1| Class I peptide chain release factor [Brevundimonas subvibrioides
ATCC 15264]
Length = 133
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 60/88 (68%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL+ + R+ GPGGQ+VN VST V +RF V + L + VK++L++L +RL DG ++
Sbjct: 7 DELEFRFYRAGGPGGQNVNKVSTAVQMRFDVVNSPSLRDPVKQRLMKLAGSRLTLDGVIL 66
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
I + R R+Q+ N ADA+ L+ M+ +A+
Sbjct: 67 ITAVRHRTQERNRADAVARLQEMVDQAS 94
>gi|13474251|ref|NP_105819.1| peptidyl-tRNA hydrolase domain-containing protein [Mesorhizobium
loti MAFF303099]
gi|14025003|dbj|BAB51605.1| mlr5097 [Mesorhizobium loti MAFF303099]
Length = 145
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L + RSSGPGGQ+VN V+T V +RF A L+E V+ + I+L R KDG ++I
Sbjct: 19 DLHEDFIRSSGPGGQNVNKVATAVQLRFDAANAAGLSERVRARTIKLAGQRATKDGVIVI 78
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++ R R+Q+ N ADA L ++ KAA+
Sbjct: 79 EAGRFRTQEQNRADARARLTALVAKAAE 106
>gi|110635829|ref|YP_676037.1| peptidyl-tRNA hydrolase domain-containing protein [Chelativorans
sp. BNC1]
gi|110286813|gb|ABG64872.1| Class I peptide chain release factor [Chelativorans sp. BNC1]
Length = 143
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL+ + RSSGPGGQ+VN V+T V +RF V A L E V+ Q ++L +R K+G ++
Sbjct: 16 DELEEQFIRSSGPGGQNVNKVATAVQLRFDVANARHLPERVRAQALKLAGSRATKEGEIV 75
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
I++ R R+Q+ N +DA L ++ KA++
Sbjct: 76 IEAGRFRTQEQNRSDARRRLTELLLKASE 104
>gi|308811576|ref|XP_003083096.1| Predicted peptidyl-tRNA hydrolase (ISS) [Ostreococcus tauri]
gi|116054974|emb|CAL57051.1| Predicted peptidyl-tRNA hydrolase (ISS) [Ostreococcus tauri]
Length = 245
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVN---AANWLNEDVKKQLIELNKNRLNKDG 141
+++ I+++RS G GGQ+VN V+TK D+R V AA WL + +L+ +NR+N DG
Sbjct: 103 DDVTISFARSGGAGGQNVNKVNTKCDMRLNVAGAVAAGWLPQWCADRLVVAERNRVNGDG 162
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
L++ S R R+Q N+ DA+ L++ I +AAK
Sbjct: 163 ELVVTSTRHRTQSQNVNDALEKLQSYINRAAK 194
>gi|209544670|ref|YP_002276899.1| peptidyl-tRNA hydrolase domain-containing protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532347|gb|ACI52284.1| Class I peptide chain release factor [Gluconacetobacter
diazotrophicus PAl 5]
Length = 140
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+++P S EL+++Y +SGPGGQ+VN V+T +RF + L + ++ +L++L
Sbjct: 4 LILPTLSLPESELEVSYILASGPGGQNVNKVATAAQLRFDAARSPSLPDRIRARLLDLAG 63
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+R ++G ++I + R R+QQ N DA+ L ++I +AA +PA +++
Sbjct: 64 SRATREGVIVITARRFRTQQRNREDAIERLADLIRQAAHRPAFRVA 109
>gi|162149418|ref|YP_001603879.1| peptidyl-tRNA hydrolase domain protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787995|emb|CAP57599.1| putative Peptidyl-tRNA hydrolase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 140
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+++P S EL+++Y +SGPGGQ+VN V+T +RF + L + ++ +L++L
Sbjct: 4 LILPTLSLPESELEVSYILASGPGGQNVNKVATAAQLRFDAARSPSLPDRIRARLLDLAG 63
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+R ++G ++I + R R+QQ N DA+ L ++I +AA +PA +++
Sbjct: 64 SRATREGVIVITARRFRTQQRNREDAIERLADLIRQAAHRPAFRVA 109
>gi|381166458|ref|ZP_09875673.1| putative Class I peptide chain release factor domain protein
[Phaeospirillum molischianum DSM 120]
gi|380684500|emb|CCG40485.1| putative Class I peptide chain release factor domain protein
[Phaeospirillum molischianum DSM 120]
Length = 146
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
F +IP+ R + E++ +Y R+SGPGGQ+VN++S+ V +RF V + L E VK++
Sbjct: 5 FGTMIPIT-DRIAIAESEIEESYQRASGPGGQNVNTLSSAVRLRFDVRNSPTLPEAVKER 63
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L L R+N+DG L+I + R+Q+ N DA+ L +I A
Sbjct: 64 LERLGGRRINRDGVLMILAQCHRTQEANRRDALERLIALIRDA 106
>gi|298293743|ref|YP_003695682.1| class I peptide chain release factor [Starkeya novella DSM 506]
gi|296930254|gb|ADH91063.1| Class I peptide chain release factor [Starkeya novella DSM 506]
Length = 143
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 72 VIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
+IPV PR E++ ++ R+SGPGGQ+VN VST V +RF V + L + VK +L
Sbjct: 1 MIPVT-PRIWLDENEIEESFVRASGPGGQNVNKVSTAVQLRFDVRGSKTLPDVVKARLER 59
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ RL K+G +++ + R R+Q+ N DA+ L M+ +AA
Sbjct: 60 IAGRRLTKEGAIVLIAQRYRTQERNREDALARLVAMVQEAA 100
>gi|192293215|ref|YP_001993820.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodopseudomonas
palustris TIE-1]
gi|192286964|gb|ACF03345.1| Class I peptide chain release factor [Rhodopseudomonas palustris
TIE-1]
Length = 139
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I++ R+SGPGGQ+VN +ST V +RF A L ED +L+ L R+ KDG ++
Sbjct: 13 DDIEISFIRASGPGGQNVNKLSTAVQLRFD-TAKIALPEDAAARLVGLAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
I++DR R+Q+ N ADA+ L ++ + +P P+
Sbjct: 72 IRADRYRTQERNKADALERLEELLKASLVRPIPR 105
>gi|170594649|ref|XP_001902076.1| Hypothetical 23.2 kDa protein in SKM1-TRF4 intergenic region,
putative [Brugia malayi]
gi|158591020|gb|EDP29635.1| Hypothetical 23.2 kDa protein in SKM1-TRF4 intergenic region,
putative [Brugia malayi]
Length = 179
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 9/115 (7%)
Query: 59 IPVKAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAA 118
+P K DG +F G IPV ++++ + RSSGPGGQ+VN V+TK IRF +N A
Sbjct: 25 VPSKGADGNEFIGYIPV---------DKIEKRFMRSSGPGGQNVNMVNTKCQIRFNLNEA 75
Query: 119 NWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+WL+ ++K+ + L+K ++I SD++R Q N D L+ ++ + K
Sbjct: 76 DWLSPEIKEVFRKRFVRLLSKQNDVVISSDKSRIQAENQEDCFEKLQALLTECNK 130
>gi|452963811|gb|EME68867.1| putative Class I peptide chain release factor domain protein
[Magnetospirillum sp. SO-1]
Length = 139
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S +E+D ++ RSSGPGGQ+VN V T V +RF + L +DV +L +L +
Sbjct: 4 ITHRISIDEKEIDESFVRSSGPGGQNVNKVETAVQLRFDARRSPSLPDDVSVRLQKLAGS 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL +DG +II + RSQ+ N A+A+ L MI +AA
Sbjct: 64 RLTQDGVIIIIAQTHRSQERNRAEALDRLVEMIREAA 100
>gi|409439664|ref|ZP_11266713.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Rhizobium
mesoamericanum STM3625]
gi|408749040|emb|CCM77894.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Rhizobium
mesoamericanum STM3625]
Length = 144
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + LNE VK ++L RL+
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFSILNSPSLNERVKANAVKLAGKRLS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
K+G L+I++ R RSQ N DA L+ +I +AAKP P
Sbjct: 71 KEGVLMIEASRFRSQDRNREDARERLKELILEAAKPPP 108
>gi|254481330|ref|ZP_05094575.1| putative peptidyl-tRNA hydrolase domain protein [marine gamma
proteobacterium HTCC2148]
gi|214038493|gb|EEB79155.1| putative peptidyl-tRNA hydrolase domain protein [marine gamma
proteobacterium HTCC2148]
Length = 156
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE++IT R+ G GGQHVN VS+ + +RF + A + L E K++L NR++ DG ++
Sbjct: 29 EEVEITAIRAQGAGGQHVNKVSSAIHLRFNI-ADSSLPEFYKQRLTRQRDNRISNDGVIV 87
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
IK+ R RSQ N ADA+ L+++I AA
Sbjct: 88 IKAQRFRSQDKNRADALERLQDLIRSAA 115
>gi|256822803|ref|YP_003146766.1| class I peptide chain release factor [Kangiella koreensis DSM
16069]
gi|256796342|gb|ACV26998.1| Class I peptide chain release factor [Kangiella koreensis DSM
16069]
Length = 138
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 73 IPVVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
+P+VI + + E+D+T R+ G GGQ+VN V++ + +RF +NA++ L E K +L+
Sbjct: 1 MPLVISNNVVLADSEIDLTAIRAQGAGGQNVNKVASAIHLRFDINASS-LPEFYKTELLA 59
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
LN NR+ +DG ++IK+ + R+Q+ N DA++ LR +I A
Sbjct: 60 LNDNRITQDGVVVIKAQKHRTQERNRDDALSRLRILIQSVA 100
>gi|398383270|ref|ZP_10541343.1| protein chain release factor B [Sphingobium sp. AP49]
gi|397725235|gb|EJK85690.1| protein chain release factor B [Sphingobium sp. AP49]
Length = 141
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 59/88 (67%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
++E+ +++R+SGPGGQHVN+ + V +RF V A+ L E VK++L +L +R+ +DG L
Sbjct: 14 SDEIVESFARASGPGGQHVNTTDSAVMLRFDVAASPGLPEAVKQRLADLAGSRMTRDGVL 73
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKA 171
I++S+ RSQ LN + L +I +A
Sbjct: 74 ILRSEGARSQLLNRQEVRERLFALIREA 101
>gi|393721625|ref|ZP_10341552.1| hypothetical protein SechA1_17844 [Sphingomonas echinoides ATCC
14820]
Length = 140
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S +EEL +++R+SGPGGQHVN+ + V +RF V A+ L + VK +L L +RL +
Sbjct: 10 ISIDSEELQESFTRASGPGGQHVNTTDSAVLLRFDVGASPSLPDAVKNRLAVLAGSRLTR 69
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
DG L+++S+ RSQ LN + L +I +A
Sbjct: 70 DGVLVLRSEGARSQLLNRQEVRDRLIELIREA 101
>gi|374292279|ref|YP_005039314.1| putative Class I peptide chain release factor [Azospirillum
lipoferum 4B]
gi|357424218|emb|CBS87085.1| putative Class I peptide chain release factor [Azospirillum
lipoferum 4B]
Length = 139
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V PR S EL + R+SGPGGQHVN + V +RF V + L + V+ +L L +
Sbjct: 4 VTPRISLDESELQEEFVRASGPGGQHVNKTESAVQLRFDVRRSPNLPDPVRYRLERLAGS 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL +DG LI+ +DR RSQ N DA L ++I AA
Sbjct: 64 RLTQDGVLILVADRHRSQIRNREDARERLIDLIRDAA 100
>gi|119358120|ref|YP_912764.1| class I peptide chain release factor [Chlorobium phaeobacteroides
DSM 266]
gi|119355469|gb|ABL66340.1| Class I peptide chain release factor [Chlorobium phaeobacteroides
DSM 266]
Length = 138
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 63/97 (64%), Gaps = 6/97 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+ IPR E++++ RS G GGQ+VN V T V +RF + ++ L+++VK++L+E+
Sbjct: 9 ITIPRA-----EIELSTMRSEGAGGQNVNKVETAVHLRFAIKDSS-LSDEVKERLLEIRD 62
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R++K G +IIK+ R RSQ+ N DA+ L ++ KA
Sbjct: 63 RRISKKGIVIIKAQRFRSQEKNREDAICRLHELLLKA 99
>gi|320162066|ref|YP_004175291.1| class I peptide chain release factor, partial [Anaerolinea
thermophila UNI-1]
gi|319995920|dbj|BAJ64691.1| class I peptide chain release factor [Anaerolinea thermophila
UNI-1]
Length = 132
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+ T R+SGPGGQ+VN VST V + F V + L DVK++L+++ R+N+ G LI
Sbjct: 6 EEIRFTAIRASGPGGQNVNKVSTAVQLHFDVLRSKALPVDVKERLVKIAGKRVNEQGVLI 65
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
I++ R+Q+ N ADA+ L+ ++ KA
Sbjct: 66 IEARAYRTQEQNRADALRRLQELVEKA 92
>gi|338971987|ref|ZP_08627366.1| hypothetical protein CSIRO_0426 [Bradyrhizobiaceae bacterium SG-6C]
gi|338234881|gb|EGP09992.1| hypothetical protein CSIRO_0426 [Bradyrhizobiaceae bacterium SG-6C]
Length = 141
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++LDI + R+SGPGGQ+VN +ST +RF VN + L DV +L L R+ +DG ++
Sbjct: 15 KDLDIAFVRASGPGGQNVNKLSTAAQLRFDVNRIS-LGPDVMTRLTALAGQRMTRDGVIV 73
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I + R R+Q+ N ADA+ L +++ +A+ +P P+
Sbjct: 74 IHAQRFRTQERNRADAIDRLLDLLREASIRPKPR 107
>gi|253999993|ref|YP_003052056.1| class I peptide chain release factor [Methylovorus glucosetrophus
SIP3-4]
gi|253986672|gb|ACT51529.1| Class I peptide chain release factor [Methylovorus glucosetrophus
SIP3-4]
Length = 134
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P+VIP E ++T R+ G GGQ+VN VS+ V +RF + A++ L+E K +L+ L
Sbjct: 3 PIVIP-----DSEFELTAMRAQGAGGQNVNKVSSAVHLRFDIRASS-LDEAHKARLLALR 56
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
R++ +G LIIK+ R RSQ LN DA+ L + + A+P P + T
Sbjct: 57 DARVSSEGVLIIKAQRHRSQLLNRQDAIERLHAWVNQVARP-PAVRHAT 104
>gi|217970528|ref|YP_002355762.1| class I peptide chain release factor [Thauera sp. MZ1T]
gi|217507855|gb|ACK54866.1| Class I peptide chain release factor [Thauera sp. MZ1T]
Length = 134
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
RF +E++IT R+ G GGQ+VN VS V +RF + AA+ L +D++ +L+ L+ +R++
Sbjct: 4 RFILSPDEIEITAIRAQGAGGQNVNKVSNAVHLRFDI-AASSLPDDIRARLLALHDHRIS 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+G +IIK+ + RS + N A+A+ L +I + A P
Sbjct: 63 KEGVVIIKAQKFRSLEKNRAEALRRLEELIERVAVP 98
>gi|313201966|ref|YP_004040624.1| class I peptide chain release factor [Methylovorus sp. MP688]
gi|312441282|gb|ADQ85388.1| Class I peptide chain release factor [Methylovorus sp. MP688]
Length = 173
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P+VIP E ++T R+ G GGQ+VN VS+ V +RF + A++ L+E K +L+ L
Sbjct: 42 PIVIP-----DSEFELTAMRAQGAGGQNVNKVSSAVHLRFDIRASS-LDEAHKARLLALR 95
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
R++ +G LIIK+ R RSQ LN DA+ L + + A+P P + T
Sbjct: 96 DARVSSEGVLIIKAQRHRSQLLNRQDAIERLHAWVNQVARP-PAVRHAT 143
>gi|218782528|ref|YP_002433846.1| class I peptide chain release factor [Desulfatibacillum
alkenivorans AK-01]
gi|218763912|gb|ACL06378.1| Class I peptide chain release factor [Desulfatibacillum
alkenivorans AK-01]
Length = 140
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
VV R S EE+D + RSSGPGGQ+VN VST V +RF V + L EDV+ +L ++
Sbjct: 3 VVNDRVSLNEEEIDYEFVRSSGPGGQNVNKVSTAVQLRFDVANSPSLPEDVRARLEKIAH 62
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
NR++ G L++ S TRSQ N +A+ L +I A +
Sbjct: 63 NRISASGVLLVDSRGTRSQLKNKEEALQRLVRLIDMACR 101
>gi|261854842|ref|YP_003262125.1| class I peptide chain release factor [Halothiobacillus neapolitanus
c2]
gi|261835311|gb|ACX95078.1| Class I peptide chain release factor [Halothiobacillus neapolitanus
c2]
Length = 132
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++ T RS G GGQHVN VST + +RF + A + L ++ K++L+ ++ +R+++DG ++I
Sbjct: 9 DVEFTAIRSQGAGGQHVNKVSTAIHLRFDIRA-SALPDEAKEKLLAVSDSRISRDGVIVI 67
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ R SQ N ADA+ L+ ++ +A +P
Sbjct: 68 KAQRFNSQDKNRADALARLQALVAQALRP 96
>gi|163787158|ref|ZP_02181605.1| Class I peptide chain release factor [Flavobacteriales bacterium
ALC-1]
gi|159877046|gb|EDP71103.1| Class I peptide chain release factor [Flavobacteriales bacterium
ALC-1]
Length = 134
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
+ EL Y RSSG GGQHVN VS+K ++ F + + N+D + +L+E KNRLNKDG
Sbjct: 6 LKSELTYKYVRSSGSGGQHVNKVSSKAELYFNLEKSQVFNDDERLKLLEFFKNRLNKDGV 65
Query: 143 LIIKSDRTRSQ 153
L++ D +RSQ
Sbjct: 66 LVLTCDESRSQ 76
>gi|333367336|ref|ZP_08459611.1| peptidyl-tRNA hydrolase domain protein [Psychrobacter sp.
1501(2011)]
gi|332978825|gb|EGK15509.1| peptidyl-tRNA hydrolase domain protein [Psychrobacter sp.
1501(2011)]
Length = 137
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
+ S +++IT R+ G GGQ+VN VS+ + +RF +NA++ L+++ K+QL+ NR+
Sbjct: 7 KISLNESDIEITAIRAQGAGGQNVNKVSSAIHLRFDINASS-LSDEQKQQLLNSKDNRIT 65
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
KDG LIIK+ + R+Q+ N DAM L+ I A P
Sbjct: 66 KDGVLIIKAQQYRTQERNKIDAMERLKQFIVSATHINP 103
>gi|303281420|ref|XP_003060002.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458657|gb|EEH55954.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 85
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVNA-ANWLNEDVKKQLIELNKNRLNKDGYLIIKS 147
IT++RS G GGQ+VN V+TKVD+R ++A +WL+ V ++L L KNR+NKDG +++S
Sbjct: 1 ITFARSGGAGGQNVNKVNTKVDMRLNLDANKDWLHPWVSRRLRILEKNRINKDGDFVMQS 60
Query: 148 DRTRSQQLNLADAMTTLRNMIWKAA 172
R R+Q N+ DA+ +++ + +A+
Sbjct: 61 SRHRTQSKNIDDALEKMQSCLNRAS 85
>gi|414168718|ref|ZP_11424681.1| hypothetical protein HMPREF9696_02536 [Afipia clevelandensis ATCC
49720]
gi|410887454|gb|EKS35264.1| hypothetical protein HMPREF9696_02536 [Afipia clevelandensis ATCC
49720]
Length = 139
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++LDI + R+SGPGGQ+VN +ST +RF VN + L DV +L L R+ +DG ++
Sbjct: 13 KDLDIAFVRASGPGGQNVNKLSTAAQLRFDVNRIS-LAPDVMTRLTALAGQRMTRDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I + R R+Q+ N ADA+ L +++ +A+ +P P+
Sbjct: 72 IHAQRFRTQERNRADAIDRLLDLLREASIRPKPR 105
>gi|406943764|gb|EKD75679.1| hypothetical protein ACD_44C00049G0002 [uncultured bacterium]
Length = 140
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+ +T+ R+SGPGGQ+VN V+T V +RF + + L E V+ +L+ L N++ DG LI
Sbjct: 12 EEIRLTFIRASGPGGQNVNKVATAVQLRFDIVHSPSLPETVRARLLVLAANKITHDGELI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
IK+ R R+Q+ N DA+ L I +A+
Sbjct: 72 IKATRFRTQEHNKRDAIHRLYEWIKRAS 99
>gi|154251090|ref|YP_001411914.1| class I peptide chain release factor [Parvibaculum lavamentivorans
DS-1]
gi|154155040|gb|ABS62257.1| Class I peptide chain release factor [Parvibaculum lavamentivorans
DS-1]
Length = 140
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 72 VIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
+IPV S +E+ ITY R+ GPGGQ+VN VS+ +RF V + LN K++L
Sbjct: 1 MIPVTDA-LSIDDDEISITYIRAGGPGGQNVNKVSSAAQLRFDVRNSPSLNGRAKERLER 59
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ RL KDG ++I ++R R+Q+ N DA+ L +I AA
Sbjct: 60 IAGARLTKDGVIVITANRFRTQEANRRDAVDRLVELIAAAA 100
>gi|58039348|ref|YP_191312.1| peptidyl-tRNA hydrolase domain-containing protein [Gluconobacter
oxydans 621H]
gi|58001762|gb|AAW60656.1| Peptidyl-tRNA hydrolase [Gluconobacter oxydans 621H]
Length = 140
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
++P +EL +TY +SGPGGQ+VN V+T +RF + L++ ++ +LIEL +
Sbjct: 5 ILPGLRIEEDELKVTYILASGPGGQNVNKVATAAQLRFDAARSPALSDRIRTRLIELAGS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
R ++G +II R R+QQ N D + L +I KAA
Sbjct: 65 RATQNGEIIITGRRFRTQQRNREDVIERLAELIRKAA 101
>gi|300023998|ref|YP_003756609.1| class I peptide chain release factor [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525819|gb|ADJ24288.1| Class I peptide chain release factor [Hyphomicrobium denitrificans
ATCC 51888]
Length = 139
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P E++ + R+SGPGGQ+VN VST V++RF + A + + + +L L
Sbjct: 3 ITPALEIDEAEIEERFIRASGPGGQNVNKVSTAVELRFNLAANRSIPDFARGKLKRLAGR 62
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQI 178
RL +G L+I++DR RSQ N +DA L+ +I +A +P P+I
Sbjct: 63 RLTTEGILVIQADRFRSQDQNRSDARARLQELIVEALERPKPRI 106
>gi|167035036|ref|YP_001670267.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
putida GB-1]
gi|166861524|gb|ABY99931.1| Class I peptide chain release factor [Pseudomonas putida GB-1]
Length = 137
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
++++TY R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L NR+ DG LII
Sbjct: 14 DIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDNRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQDQNRADALARLAELIIAAAK 100
>gi|145357105|ref|XP_001422763.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583006|gb|ABP01080.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 4/93 (4%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVN---AANWLNEDVKKQLIELNKNRLNKDGYLII 145
++++RS G GGQ+VN V+TKVD+R V AA WL + +L+ KNR+N +G L++
Sbjct: 16 VSFARSGGAGGQNVNKVNTKVDMRLDVAGAVAAGWLPQWCADRLVVAEKNRVNSNGELVV 75
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQ 177
S R R+Q N+ DA+ L++ I +AAK P Q
Sbjct: 76 NSTRHRTQSQNVDDALEKLQSYINRAAKLPGSQ 108
>gi|414343813|ref|YP_006985334.1| peptidyl-tRNA hydrolase domain-containing protein [Gluconobacter
oxydans H24]
gi|411029148|gb|AFW02403.1| peptidyl-tRNA hydrolase domain-containing protein [Gluconobacter
oxydans H24]
gi|453328544|dbj|GAC89207.1| peptidyl-tRNA hydrolase domain-containing protein [Gluconobacter
thailandicus NBRC 3255]
Length = 140
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V+P E+L +TY +SGPGGQ+VN V+T +RF + L+E V+ +L+E+ +
Sbjct: 5 VMPGLILRDEDLRVTYILASGPGGQNVNKVATAAQLRFDAAGSPVLSERVRTRLLEIAGS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
R +DG +++ R R+QQ N D + L MI +AA
Sbjct: 65 RATRDGEIVLTGRRFRTQQRNREDVIERLAVMIREAA 101
>gi|399087934|ref|ZP_10753358.1| protein chain release factor B [Caulobacter sp. AP07]
gi|398031904|gb|EJL25275.1| protein chain release factor B [Caulobacter sp. AP07]
Length = 140
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL +R+SGPGGQHVN ST +++RF V + L EDVK +L L +R+ DG L+
Sbjct: 13 DELVEKATRASGPGGQHVNKTSTAIELRFDVRNSPTLPEDVKTRLEALGGSRMTLDGVLV 72
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
+ + +RSQ++N +A L +I +A KP P+
Sbjct: 73 LFAQGSRSQEMNRQEARERLVELIRRATEKPKPR 106
>gi|395006302|ref|ZP_10390131.1| protein chain release factor B [Acidovorax sp. CF316]
gi|394315715|gb|EJE52496.1| protein chain release factor B [Acidovorax sp. CF316]
Length = 137
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ R+ G GGQ+VN VS+ V +RF + AA+ L+E VK++L+ L +R+ +DG ++I
Sbjct: 14 EVEISAMRAQGAGGQNVNKVSSAVHLRFDI-AASSLSEGVKERLLALRDSRITQDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+ + RSQ+ N +DA+ L ++ A P P++ T
Sbjct: 73 KAQQYRSQEQNRSDAIERLNALVNTVAAP-PRVRRAT 108
>gi|422318942|ref|ZP_16400033.1| hypothetical protein HMPREF0005_05619 [Achromobacter xylosoxidans
C54]
gi|317406423|gb|EFV86637.1| hypothetical protein HMPREF0005_05619 [Achromobacter xylosoxidans
C54]
Length = 138
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
YI E E++ + R+ G GGQ+VN VS+ V +RF V A++ L ++++ L +N +R++K+
Sbjct: 9 YIDEREIEFSMIRAQGAGGQNVNKVSSAVHLRFDVRASS-LPAEIQEALCAMNDHRISKE 67
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G ++IKS RSQ N A+A+ L NM+ AAK
Sbjct: 68 GVIVIKSQSFRSQDKNRAEAIERLMNMVRAAAK 100
>gi|365087903|ref|ZP_09327661.1| class i peptide chain release factor [Acidovorax sp. NO-1]
gi|363417339|gb|EHL24420.1| class i peptide chain release factor [Acidovorax sp. NO-1]
Length = 138
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
P +E++IT R+ G GGQ+VN VS+ V +RF V AA+ L +DVK++L+ L +R+
Sbjct: 5 PPLQVPEDEVEITAMRAQGAGGQNVNKVSSAVHLRFDV-AASSLPDDVKERLLALRDSRI 63
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
++G ++IK+ + RSQ+ N DA+ L ++ A P P++ T
Sbjct: 64 TQEGVVVIKAQQYRSQEQNRTDALVRLNALVNTVAVP-PRVRRAT 107
>gi|442760549|gb|JAA72433.1| Putative peptidyl-trna hydrolase, partial [Ixodes ricinus]
Length = 222
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 38/170 (22%)
Query: 10 LISNQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLK- 68
++N + R YKS++SLDK+YP+S + N V PV AP
Sbjct: 57 FVANTPSFSVRSYKSAVSLDKIYPDSDL------------------NHVKPVDAPQSTNE 98
Query: 69 -FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKK 127
F+G IP+ +D+ + P +V++R +++A+W+ + +
Sbjct: 99 VFSGYIPM---------NRVDVRENNPDNP---------FRVELRVHLDSADWIPQSGRD 140
Query: 128 QLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+L +L K ++ DG L++ SD+T+ + +N+AD + LR MI +A KP P+
Sbjct: 141 RLKKLAKVYIDADGKLVVSSDKTKKKLVNVADCVDKLRTMIREACKPPPE 190
>gi|83945459|ref|ZP_00957806.1| peptidyl-tRNA hydrolase [Oceanicaulis sp. HTCC2633]
gi|83851035|gb|EAP88893.1| peptidyl-tRNA hydrolase [Oceanicaulis alexandrii HTCC2633]
Length = 137
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
S ITE + RSSGPGGQHVN + V +RF V +A+ L + +K++L + R+ +D
Sbjct: 12 SLITER----FVRSSGPGGQHVNKTESAVQLRFDV-SASALPDAIKQRLKRIAGTRMTQD 66
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQI 178
G LI+ + RSQ N A+A T L+ +I +A+ KP P+I
Sbjct: 67 GVLILHVEDHRSQDRNRAEARTRLKRLIEQASRKPKPRI 105
>gi|398979710|ref|ZP_10688596.1| protein chain release factor B [Pseudomonas sp. GM25]
gi|398135443|gb|EJM24560.1| protein chain release factor B [Pseudomonas sp. GM25]
Length = 137
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSATK 100
>gi|392382647|ref|YP_005031844.1| putative Class I peptide chain release factor domain protein
[Azospirillum brasilense Sp245]
gi|356877612|emb|CCC98454.1| putative Class I peptide chain release factor domain protein
[Azospirillum brasilense Sp245]
Length = 139
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V PR S EL ++ R+SGPGGQHVN + V +RF V A+ + +DVK +L+ L +
Sbjct: 4 VTPRISLDESELQESFIRASGPGGQHVNKTDSAVQLRFDVAASPNIPDDVKARLVRLAGS 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+ G LII D RSQ N D L ++I A
Sbjct: 64 RMTAAGVLIIVGDTYRSQLRNREDVRERLIDLIRDA 99
>gi|349702737|ref|ZP_08904366.1| hypothetical protein GeurL1_18324 [Gluconacetobacter europaeus LMG
18494]
Length = 135
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL +TY +SGPGGQ+VN V+T +RF + L+ VK +L+E+ +R+ DG ++
Sbjct: 9 DELHVTYILASGPGGQNVNKVATAAQLRFDARNSPTLSGRVKHRLVEVAGSRMTADGVIV 68
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ + R RSQ N DA+ L++MI +A+
Sbjct: 69 LTARRFRSQTRNREDAVARLQDMITQAS 96
>gi|311106692|ref|YP_003979545.1| peptidyl-tRNA hydrolase domain-containing protein [Achromobacter
xylosoxidans A8]
gi|310761381|gb|ADP16830.1| peptidyl-tRNA hydrolase domain protein [Achromobacter xylosoxidans
A8]
Length = 138
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
Y+ E +L T R+ G GGQ+VN VS+ V +RF V A++ L E++K+ L L+ +R++KD
Sbjct: 9 YLDERDLAFTMIRAQGAGGQNVNKVSSAVHLRFDVRASS-LPEEIKEALCALSDHRVSKD 67
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G ++IKS RSQ+ N A+A+ L +M+ AA+
Sbjct: 68 GVIVIKSQAFRSQEKNRAEAIERLISMVRAAAR 100
>gi|398805377|ref|ZP_10564354.1| protein chain release factor B [Polaromonas sp. CF318]
gi|398091745|gb|EJL82174.1| protein chain release factor B [Polaromonas sp. CF318]
Length = 138
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
P+F E++ + R+ G GGQ+VN VS+ V +RF +NA++ L + +K++L+ L+ +R+
Sbjct: 5 PKFPVDEREVEFSAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPDAIKERLLALSDSRI 63
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
++G L++K+ + R+Q++N ADA+ L+ ++ + P
Sbjct: 64 TQEGVLVLKAQQHRTQEMNRADALARLQEVVDGVSTP 100
>gi|414175448|ref|ZP_11429852.1| hypothetical protein HMPREF9695_03498 [Afipia broomeae ATCC 49717]
gi|410889277|gb|EKS37080.1| hypothetical protein HMPREF9695_03498 [Afipia broomeae ATCC 49717]
Length = 139
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++LDI + R+SGPGGQ+VN +ST +RF V L DV +L L R+ KDG ++
Sbjct: 13 KDLDIAFVRASGPGGQNVNKLSTAAQLRFDVGRI-ALEPDVLTRLTTLAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I + R R+Q+ N ADA+ L ++ +AA +P P+
Sbjct: 72 IHAQRFRTQERNRADAIDRLLELLREAAVRPKPR 105
>gi|39937432|ref|NP_949708.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodopseudomonas
palustris CGA009]
gi|39651291|emb|CAE29813.1| Class I peptide chain release factor domain [Rhodopseudomonas
palustris CGA009]
Length = 139
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I++ R+SGPGGQ+VN +ST +RF A L ED +L+ L R+ KDG ++
Sbjct: 13 DDIEISFIRASGPGGQNVNKLSTAAQLRFDT-AKIALPEDAAARLVGLAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
I++DR R+Q+ N ADA+ L ++ + +P P+
Sbjct: 72 IRADRYRTQERNRADALERLAELLKASLVRPIPR 105
>gi|338737792|ref|YP_004674754.1| Class I peptide chain release factor domain [Hyphomicrobium sp.
MC1]
gi|337758355|emb|CCB64180.1| Class I peptide chain release factor domain [Hyphomicrobium sp.
MC1]
Length = 139
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+ + R+SGPGGQ+VN VST V++RF + A + +++L L RL DG ++I
Sbjct: 13 ELEERFVRASGPGGQNVNKVSTAVELRFNLRANTSIPPYARERLKRLAGRRLTLDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
++DR RSQ+ N ADA L +I +A
Sbjct: 73 QADRFRSQEQNRADARARLAELIAEA 98
>gi|87121347|ref|ZP_01077237.1| putative protein with Class I peptide chain release factor domain
and peptidyl-tRNA hydrolase domain [Marinomonas sp.
MED121]
gi|86163504|gb|EAQ64779.1| putative protein with Class I peptide chain release factor domain
and peptidyl-tRNA hydrolase domain [Marinomonas sp.
MED121]
Length = 137
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
I V IP E+++T RS G GGQ+VN VS+ + +RF + A++ L E K +L+ L
Sbjct: 6 IAVAIP-----DHEMELTAIRSQGAGGQNVNKVSSAIHLRFDIKASS-LPEFHKSRLLAL 59
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+R+ KDG +IIK+ + R+Q+LN DA+ L+ +I A K
Sbjct: 60 KDSRITKDGVVIIKAQQHRTQELNREDALARLKALILDAIK 100
>gi|77457721|ref|YP_347226.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
fluorescens Pf0-1]
gi|77381724|gb|ABA73237.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 137
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSATK 100
>gi|351729437|ref|ZP_08947128.1| class I peptide chain release factor [Acidovorax radicis N35]
Length = 134
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++IT R+ G GGQ+VN VS+ V +RF V AA+ L EDVK++L+ L R+ ++G ++
Sbjct: 8 DEVEITAMRAQGAGGQNVNKVSSAVHLRFDV-AASSLPEDVKERLLALRDTRITQEGVVV 66
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
IK+ + RSQ N DA+ L ++ A P P++ T
Sbjct: 67 IKAQQYRSQDQNRTDALERLNALVNTVAVP-PRVRRAT 103
>gi|324500936|gb|ADY40424.1| Peptidyl-tRNA hydrolase ICT1 [Ascaris suum]
Length = 181
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 13/108 (12%)
Query: 63 APDGLKFNGVIP--VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANW 120
AP G F+G+ P V RF RS GPGGQ+VN V++K +IRF + AA W
Sbjct: 33 APTGKHFDGIFPPGAVEKRFM-----------RSRGPGGQNVNMVNSKCEIRFNLKAAEW 81
Query: 121 LNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
L+ +++ + +++ G +I++S++TR+Q NL D T LR M+
Sbjct: 82 LSTELRTKFRVKFPRFVSEGGDVIVQSEKTRNQADNLDDCFTKLRQML 129
>gi|152995524|ref|YP_001340359.1| class I peptide chain release factor [Marinomonas sp. MWYL1]
gi|150836448|gb|ABR70424.1| Class I peptide chain release factor [Marinomonas sp. MWYL1]
Length = 137
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 65/102 (63%), Gaps = 6/102 (5%)
Query: 72 VIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
+ V IP E+++T R+ G GGQ+VN VS+ + +RF V A + L E K++L+
Sbjct: 5 TLAVAIP-----DHEIELTAIRAQGAGGQNVNKVSSAIHLRFNV-AESSLPEFYKERLLA 58
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
LN +RL KDG +++K+ + R+Q+LN DA+ L+ +I +A +
Sbjct: 59 LNDSRLTKDGDIVLKAQQHRTQELNREDALARLKELILEAVR 100
>gi|241167354|ref|XP_002410039.1| immature colon carcinoma transcript 1 protein, putative [Ixodes
scapularis]
gi|215494709|gb|EEC04350.1| immature colon carcinoma transcript 1 protein, putative [Ixodes
scapularis]
Length = 177
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 38/170 (22%)
Query: 10 LISNQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLK- 68
++N ++ R YKS++SLDK+YP+S + N V PV+AP
Sbjct: 12 FVANTPSLSARSYKSAVSLDKIYPDSDL------------------NHVKPVEAPQSTNE 53
Query: 69 -FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKK 127
F+G IP ++ R + P +V++R +++A W+ + +
Sbjct: 54 VFSGYIP------------MNRVEVRENNPDNPF------RVELRVHLDSAEWIPQSGRD 95
Query: 128 QLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+L +L K ++ DG L++ SD+T+ + +N+AD + LR M+ +A KP P+
Sbjct: 96 RLKKLAKVYIDADGKLVVSSDKTKKKLVNVADCVDKLRIMVREACKPPPE 145
>gi|297569565|ref|YP_003690909.1| Class I peptide chain release factor [Desulfurivibrio alkaliphilus
AHT2]
gi|296925480|gb|ADH86290.1| Class I peptide chain release factor [Desulfurivibrio alkaliphilus
AHT2]
Length = 138
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL T R+ GPGGQHVN VST + + F + A++ L E K++L+ LN R++ DG ++I
Sbjct: 13 ELAFTAIRAGGPGGQHVNKVSTAIQLFFDIRASS-LPEPYKERLLALNDRRISADGVVVI 71
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R RSQ+ N +A LR +I K
Sbjct: 72 KAVRHRSQEKNKEEARQRLRELIAAVTK 99
>gi|149926176|ref|ZP_01914438.1| hypothetical protein LMED105_01548 [Limnobacter sp. MED105]
gi|149824994|gb|EDM84206.1| hypothetical protein LMED105_01548 [Limnobacter sp. MED105]
Length = 135
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 83 ITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
+TE +++ T R+ G GGQ+VN VS+ + +RF + +++ L E +K++L+ L RL K+G
Sbjct: 8 LTESDVEFTAIRAQGAGGQNVNKVSSAIHLRFDIRSSS-LPEFIKEKLLALQDQRLTKEG 66
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
++IK+ TRSQ+ N DA+ L +I + AKP
Sbjct: 67 VIVIKAQTTRSQEQNRVDALARLNELIAEVAKP 99
>gi|325291489|ref|YP_004277353.1| peptidyl-tRNA hydrolase domain-containing protein [Agrobacterium
sp. H13-3]
gi|325059342|gb|ADY63033.1| peptidyl-tRNA hydrolase domain protein [Agrobacterium sp. H13-3]
Length = 144
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + L E VK + L R++
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLPERVKANALRLGGRRVS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+G L+I++ R RSQ+ N DA L+ +I +AA P+P + + T
Sbjct: 71 KEGVLMIEASRFRSQERNREDARERLKELILEAAAPSPPVRKAT 114
>gi|224824925|ref|ZP_03698031.1| Class I peptide chain release factor [Pseudogulbenkiania
ferrooxidans 2002]
gi|347540460|ref|YP_004847885.1| class I peptide chain release factor [Pseudogulbenkiania sp. NH8B]
gi|224602596|gb|EEG08773.1| Class I peptide chain release factor [Pseudogulbenkiania
ferrooxidans 2002]
gi|345643638|dbj|BAK77471.1| class I peptide chain release factor [Pseudogulbenkiania sp. NH8B]
Length = 135
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
P FS EE+D + R+ G GGQ+VN VS+ + +RF V A++ L +K++L++L R+
Sbjct: 4 PVFSVQEEEVDFSAIRAQGAGGQNVNKVSSAIHLRFDVTASS-LPAYIKERLLQLGDQRV 62
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+K+G ++IK+ + R+Q+ N ADA+ L+ ++
Sbjct: 63 SKEGVVVIKAQQYRTQEQNRADALLRLQALV 93
>gi|307942269|ref|ZP_07657620.1| peptidyl-tRNA hydrolase domain protein [Roseibium sp. TrichSKD4]
gi|307774555|gb|EFO33765.1| peptidyl-tRNA hydrolase domain protein [Roseibium sp. TrichSKD4]
Length = 143
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
G IPV F + ++L + R+SGPGGQ+VN VST V +RF + A L DVK +
Sbjct: 1 MTGKIPVTNKLF-ILEDDLREDFIRASGPGGQNVNKVSTAVQLRFSLEANETLPGDVKSR 59
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
L ++L G +II++DR R+++ N DA+ L ++ KA KP P+
Sbjct: 60 AARLAGSKLTLSGEIIIQADRFRTRERNREDALGRLIELLKKATKKPKPR 109
>gi|188582669|ref|YP_001926114.1| class I peptide chain release factor [Methylobacterium populi
BJ001]
gi|179346167|gb|ACB81579.1| Class I peptide chain release factor [Methylobacterium populi
BJ001]
Length = 141
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 90 TYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDR 149
++ R+SGPGGQ+VN +ST V +RF V + L + V +L+ L RL +G L+I + R
Sbjct: 19 SFVRASGPGGQNVNKLSTAVQLRFDVRRSRSLPDAVAVRLMRLAGRRLTGEGVLVITAQR 78
Query: 150 TRSQQLNLADAMTTLRNMIWKAAKP 174
R+Q+ N ADA L M+ +AA P
Sbjct: 79 FRTQERNRADARERLAEMVAEAAVP 103
>gi|258405271|ref|YP_003198013.1| class I peptide chain release factor [Desulfohalobium retbaense DSM
5692]
gi|257797498|gb|ACV68435.1| Class I peptide chain release factor [Desulfohalobium retbaense DSM
5692]
Length = 142
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++ RS GPGGQ+VN+V+T V +RF + +++ L E VK +L+ R+NK+G LI+
Sbjct: 14 EIELNAVRSQGPGGQNVNTVATAVQLRFDIPSSS-LPEAVKARLLSRKDKRVNKEGVLIL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ RSQ+ N A+ L+ ++ +AA P
Sbjct: 73 KAQTARSQEANRRQALDRLQQIVAEAATP 101
>gi|418054365|ref|ZP_12692421.1| Class I peptide chain release factor [Hyphomicrobium denitrificans
1NES1]
gi|353211990|gb|EHB77390.1| Class I peptide chain release factor [Hyphomicrobium denitrificans
1NES1]
Length = 139
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P E++ + R+SGPGGQ+VN VST V++RF + A + + + +L L
Sbjct: 3 ITPALDIDEAEIEERFIRASGPGGQNVNKVSTAVELRFNLAANRSIPDYARSKLKRLAGR 62
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQI 178
RL +G ++I++DR RSQ+ N +DA L+ +I A +P P+I
Sbjct: 63 RLTTEGIVVIQADRFRSQEQNRSDARERLQELIVAALERPKPRI 106
>gi|359432485|ref|ZP_09222861.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20652]
gi|357920885|dbj|GAA59110.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20652]
Length = 137
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T RS G GGQ+VN V++ + +RF +N + L + K++L+ LN R+ KDG LII
Sbjct: 14 ELELTAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPDFYKERLLALNDTRITKDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q+LN DA+ L+++I A K
Sbjct: 73 KAQSHRTQELNRDDALKRLKDLILSATK 100
>gi|381203926|ref|ZP_09911030.1| hypothetical protein SyanX_25539 [Sphingobium yanoikuyae XLDN2-5]
Length = 141
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 59/88 (67%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
++E+ +++R+SGPGGQHVN+ + V +RF V A+ L + VK++L +L +R+ +DG L
Sbjct: 14 SDEIVESFARASGPGGQHVNTTDSAVMLRFDVAASPGLPDVVKQRLADLAGSRMTRDGVL 73
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKA 171
I++S+ RSQ LN + L +I +A
Sbjct: 74 ILRSEGARSQLLNRQEVRERLFALIREA 101
>gi|427411600|ref|ZP_18901802.1| hypothetical protein HMPREF9718_04276 [Sphingobium yanoikuyae ATCC
51230]
gi|425709890|gb|EKU72913.1| hypothetical protein HMPREF9718_04276 [Sphingobium yanoikuyae ATCC
51230]
Length = 141
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 58/88 (65%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
++E+ +++R+SGPGGQHVN+ + V +RF V A+ L + VK++L +L +R+ +DG L
Sbjct: 14 SDEIVESFARASGPGGQHVNTTDSAVMLRFDVAASPGLPDAVKQRLADLAGSRMTRDGVL 73
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKA 171
I++S+ RSQ LN L +I +A
Sbjct: 74 ILRSEGARSQLLNRQQVRERLFALIREA 101
>gi|402850411|ref|ZP_10898612.1| Hypothetical protein YaeJ [Rhodovulum sp. PH10]
gi|402499316|gb|EJW11027.1| Hypothetical protein YaeJ [Rhodovulum sp. PH10]
Length = 139
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + R+SGPGGQ+VN V+T V +RF V + L DV +L++L +RL +G L+I
Sbjct: 14 ELVEDFVRASGPGGQNVNKVATAVQLRFDVRRSRALPNDVAIRLMKLAGSRLTGEGVLVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
+ R R+Q+ N DA L +I +AA +P P+
Sbjct: 74 TAQRFRTQERNREDARERLVELIRQAAVRPTPR 106
>gi|224001482|ref|XP_002290413.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973835|gb|EED92165.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 132
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 58/84 (69%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+++ +++RSSG GGQ+VN V TKV++RF +++A+W+ +V+++L NR+N DG++
Sbjct: 6 DQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMS 65
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
+ S R+Q N DA+ L +++
Sbjct: 66 VNSQEYRTQVQNRKDALKKLEDIL 89
>gi|340776190|ref|ZP_08696133.1| hypothetical protein AaceN1_00022 [Acetobacter aceti NBRC 14818]
Length = 140
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V+P ++L+ITY +SGPGGQ+VN V+T +RF + A + E ++ + +EL
Sbjct: 5 VLPGVVLDEDDLEITYILASGPGGQNVNKVATAAQLRFNLLNAQGIPERIRLRALELAGT 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
R +DG ++I R RSQQ N D + L +I +AA +PA +++
Sbjct: 65 RATRDGAIVITGRRFRSQQRNREDVIQRLIELIRQAAHRPAFRVA 109
>gi|1175508|sp|P45388.1|ARFB_PSEPU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; AltName:
Full=Alternative ribosome-rescue factor B
Length = 137
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q N ADA+ L +I A K
Sbjct: 73 KAQQYRTQDQNRADALARLAELIIAAGK 100
>gi|316935890|ref|YP_004110872.1| class I peptide chain release factor [Rhodopseudomonas palustris
DX-1]
gi|315603604|gb|ADU46139.1| Class I peptide chain release factor [Rhodopseudomonas palustris
DX-1]
Length = 139
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I++ R+SGPGGQ+VN ++T +RF A L ED +L+ L R+ KDG ++
Sbjct: 13 DDIEISFIRASGPGGQNVNKLATAAQLRFDT-ARIALPEDAAARLVGLAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
I++DR R+Q+ N ADA+ L ++ + +P P+
Sbjct: 72 IRADRYRTQERNKADALERLEELLKASLVRPIPR 105
>gi|329848781|ref|ZP_08263809.1| RF-1 domain protein [Asticcacaulis biprosthecum C19]
gi|328843844|gb|EGF93413.1| RF-1 domain protein [Asticcacaulis biprosthecum C19]
Length = 143
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANW-LNEDVKKQLIELNK 134
+ P+ S +EL ++ R+SG GGQ+VN VST V++RF + NW + DVK++L +L
Sbjct: 4 ITPKISVPDDELHESFVRASGAGGQNVNKVSTAVELRFSI-VNNWTIPYDVKERLTKLGG 62
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+ DG L++ R+Q++N A+ ++ KAA+P P
Sbjct: 63 RRVTNDGELVLFVQVHRTQEMNRKAALERFVELVSKAAEPPP 104
>gi|345873150|ref|ZP_08825069.1| Class I peptide chain release factor [Thiorhodococcus drewsii AZ1]
gi|343917552|gb|EGV28350.1| Class I peptide chain release factor [Thiorhodococcus drewsii AZ1]
Length = 175
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + RS GPGGQ+VN V+T V + F V + L EDV+++L L R++ DG L I
Sbjct: 49 ELSERFIRSPGPGGQNVNKVATAVQLSFDVARSPSLPEDVRRRLNGLAGRRIDGDGVLTI 108
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
++ R R+++ N DA L ++I +AA +P P+I+
Sbjct: 109 EAHRFRTRERNREDARERLADLIRQAAHRPKPRIA 143
>gi|333908685|ref|YP_004482271.1| class I peptide chain release factor [Marinomonas posidonica
IVIA-Po-181]
gi|333478691|gb|AEF55352.1| Class I peptide chain release factor [Marinomonas posidonica
IVIA-Po-181]
Length = 137
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 6/101 (5%)
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
+ V IP +E+++T R+ G GGQ+VN VS+ + +RF V A++ L E K++L+ L
Sbjct: 6 LAVAIP-----DDEIELTAIRAQGAGGQNVNKVSSAIHLRFNV-ASSSLPEFHKERLLAL 59
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+RL KDG ++IK+ + R+Q+LN DA+ L+ +I A K
Sbjct: 60 KDSRLTKDGDIVIKAQQHRTQELNREDALARLKELILDAIK 100
>gi|83643309|ref|YP_431744.1| protein chain release factor B [Hahella chejuensis KCTC 2396]
gi|83631352|gb|ABC27319.1| Protein chain release factor B [Hahella chejuensis KCTC 2396]
Length = 139
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+D+ R+ G GGQ+VN VS+ V +RF +NA++ L E K++L+EL+ R+ KDG ++I
Sbjct: 14 EIDMQAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPEIYKERLLELSDQRITKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ + R+Q+ N DA+ L+ +I A
Sbjct: 73 KAQQYRTQEQNREDALMRLKEVIVAA 98
>gi|328543905|ref|YP_004304014.1| class I peptide chain release factor [Polymorphum gilvum
SL003B-26A1]
gi|326413649|gb|ADZ70712.1| Class I peptide chain release factor [Polymorphum gilvum
SL003B-26A1]
Length = 158
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 82 YITEE-LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
YI+E+ L + R+SGPGGQ+VN VST V +RF + L +DVK + L +RL +
Sbjct: 27 YISEDDLHEDFVRASGPGGQNVNKVSTAVQLRFDLAGNATLPDDVKARAARLAGSRLTQG 86
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
G +++++DR RS++ N DA+ L ++ AA
Sbjct: 87 GEIVLQADRFRSRERNREDALARLIELLASAA 118
>gi|410618040|ref|ZP_11329002.1| ribosome-associated protein [Glaciecola polaris LMG 21857]
gi|410162464|dbj|GAC33140.1| ribosome-associated protein [Glaciecola polaris LMG 21857]
Length = 137
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
Query: 81 SYIT---EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
SYI+ E+++T R+ G GGQ+VN VS+ + +RF + A++ L E K+QL++ N NR+
Sbjct: 6 SYISLQDHEVELTAIRAQGAGGQNVNKVSSAIHLRFDIKASS-LPEFYKEQLLKSNDNRI 64
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG L++K+ R+Q++N DA+ L ++ +A+
Sbjct: 65 TQDGVLVLKAQAHRTQEMNRQDALERLAAIVCEAS 99
>gi|119470666|ref|ZP_01613334.1| hypothetical protein ATW7_00810 [Alteromonadales bacterium TW-7]
gi|359450170|ref|ZP_09239633.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20480]
gi|392537314|ref|ZP_10284451.1| hypothetical protein Pmarm_04268 [Pseudoalteromonas marina mano4]
gi|119446136|gb|EAW27414.1| hypothetical protein ATW7_00810 [Alteromonadales bacterium TW-7]
gi|358043985|dbj|GAA75882.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20480]
Length = 137
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T RS G GGQ+VN V++ + +RF +N + L + K++L+ LN +R+ K+G LII
Sbjct: 14 ELELTAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPDFYKERLLALNDSRITKEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q+LN DA+ L+++I A K
Sbjct: 73 KAQSHRTQELNREDALKRLKDLILSATK 100
>gi|359783394|ref|ZP_09286608.1| hypothetical protein PPL19_20096 [Pseudomonas psychrotolerans L19]
gi|359368611|gb|EHK69188.1| hypothetical protein PPL19_20096 [Pseudomonas psychrotolerans L19]
Length = 138
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V+ R + +E+ +T R+ G GGQ+VN VS+ V +RF + A++ L E +K +L+ L
Sbjct: 4 VIDERLTLPEQEIQLTAVRAQGAGGQNVNKVSSAVHLRFDIQASS-LPEALKARLLALRD 62
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+++DG ++IK+ + R+Q+ N ADA+ L +I A
Sbjct: 63 GRISRDGVVVIKAQQYRTQEQNRADALERLAALIAAA 99
>gi|332532993|ref|ZP_08408863.1| hypothetical protein YaeJ [Pseudoalteromonas haloplanktis ANT/505]
gi|332037472|gb|EGI73925.1| hypothetical protein YaeJ [Pseudoalteromonas haloplanktis ANT/505]
Length = 137
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T RS G GGQ+VN V++ + +RF +N + L + K++L+ LN R+ KDG LII
Sbjct: 14 ELELTAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPDFYKERLLALNDTRITKDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ R+Q+LN DA+ L+++I A
Sbjct: 73 KAQSHRTQELNREDALKRLKDLILSA 98
>gi|254502019|ref|ZP_05114170.1| Peptidyl-tRNA hydrolase domain, putative [Labrenzia alexandrii
DFL-11]
gi|222438090|gb|EEE44769.1| Peptidyl-tRNA hydrolase domain, putative [Labrenzia alexandrii
DFL-11]
Length = 153
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
VI R ++L+ + R+SGPGGQ+VN VST V +RF + A L +DVK + ++ +
Sbjct: 16 VIGRLYITRDDLNEEFIRASGPGGQNVNKVSTAVQLRFNLWANQTLPQDVKSRAAKIAGS 75
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
RL + G +I+++DR R+++ N DA+ L +++ +A KP P+
Sbjct: 76 RLTQYGEIILQADRHRTRERNRDDALARLIDLLKRATEKPKPR 118
>gi|6630453|gb|AAF19541.1|AC007190_9 F23N19.20 [Arabidopsis thaliana]
Length = 130
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 11/91 (12%)
Query: 80 FSYITEELDITYSRSSGPGGQHVN-----------SVSTKVDIRFKVNAANWLNEDVKKQ 128
F + + + ++RS GPGGQ+VN +V+TKVD+RF V A WL++ ++++
Sbjct: 15 FLVFADNVTLNFARSGGPGGQNVNKCMFQYLYFSLTVNTKVDMRFNVKNAYWLSDRIREK 74
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLAD 159
++ KNR+NKDG L+I S +TR+Q AD
Sbjct: 75 ILLTEKNRINKDGELVISSTKTRTQNAAKAD 105
>gi|398848435|ref|ZP_10605251.1| protein chain release factor B [Pseudomonas sp. GM84]
gi|398248421|gb|EJN33836.1| protein chain release factor B [Pseudomonas sp. GM84]
Length = 146
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
++++TY R+ G GGQ+VN VS+ V +RF + A+ L E K++L+ L +R+ DG LII
Sbjct: 23 DIELTYIRAQGAGGQNVNKVSSAVHLRFDI-PASMLPEFYKERLLALRDSRITADGVLII 81
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 82 KAQQYRTQEQNRADALARLAELIINAGK 109
>gi|444379163|ref|ZP_21178347.1| Hypothetical protein D515_3246 [Enterovibrio sp. AK16]
gi|443676753|gb|ELT83450.1| Hypothetical protein D515_3246 [Enterovibrio sp. AK16]
Length = 137
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+DI+Y R+ G GGQ+VN VS+ V +RF V A++ L + K++L+ L +RL KDG ++
Sbjct: 13 DEIDISYIRAQGAGGQNVNKVSSAVHLRFDVQASS-LPDFYKERLLALKDSRLTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+K+ + R+Q+ N DA+ L+ +I A
Sbjct: 72 LKAQQFRTQEKNREDALQRLQELIKSVA 99
>gi|451945931|ref|YP_007466526.1| protein chain release factor B [Desulfocapsa sulfexigens DSM 10523]
gi|451905279|gb|AGF76873.1| protein chain release factor B [Desulfocapsa sulfexigens DSM 10523]
Length = 137
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++ + R+ G GGQ+VN V++ V +RF + AA+ L E VK +L+ + R++K+G L+
Sbjct: 13 QEIELKFIRAQGAGGQNVNKVASAVHMRFDI-AASSLPERVKDRLLAMRDQRISKEGILV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
+K+ + RSQ+ N DA+ L+ +I++A
Sbjct: 72 LKAQQYRSQEKNKEDALQRLKEIIFRA 98
>gi|347761589|ref|YP_004869150.1| translation peptide chain release factor class I [Gluconacetobacter
xylinus NBRC 3288]
gi|347580559|dbj|BAK84780.1| translation peptide chain release factor class I [Gluconacetobacter
xylinus NBRC 3288]
Length = 135
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P VIP +EL +TY +SGPGGQ+VN V+T +RF V + L K +L E+
Sbjct: 3 PPVIP-----DDELHVTYILASGPGGQNVNKVATAAQLRFDVRNSPSLPPRTKHRLTEVA 57
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+R+ DG +++ + R RSQ N DA+ L MI +A+
Sbjct: 58 GSRMTGDGVIVLTARRFRSQTRNREDAVARLHEMIGEAS 96
>gi|77464943|ref|YP_354447.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodobacter
sphaeroides 2.4.1]
gi|332559842|ref|ZP_08414164.1| hypothetical protein RSWS8N_12305 [Rhodobacter sphaeroides WS8N]
gi|77389361|gb|ABA80546.1| Class I peptide chain release factor [Rhodobacter sphaeroides
2.4.1]
gi|332277554|gb|EGJ22869.1| hypothetical protein RSWS8N_12305 [Rhodobacter sphaeroides WS8N]
Length = 141
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++SRSSGPGGQ+VN V T V++RF+ + L+ VK +L L R ++G ++I
Sbjct: 14 ELTESFSRSSGPGGQNVNKVETAVELRFEAERSPHLSPAVKARLKRLAGRRWTQEGAIVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+++ TRSQQ N A L M+ +AA AP+
Sbjct: 74 RAEETRSQQRNRELARERLAEMV-RAALVAPK 104
>gi|398835926|ref|ZP_10593276.1| protein chain release factor B [Herbaspirillum sp. YR522]
gi|398214248|gb|EJN00830.1| protein chain release factor B [Herbaspirillum sp. YR522]
Length = 142
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+++T R+ G GGQ+VN VS+ + +RF + A++ L ++VK++L+ + R++K+G +I
Sbjct: 18 EEVELTPIRAQGAGGQNVNKVSSAIHLRFDIRASS-LPDEVKQRLLAMRDQRISKEGVVI 76
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
IK+ RSQ++N ADA+ L ++
Sbjct: 77 IKAQAHRSQEMNKADALQRLHELV 100
>gi|159184133|ref|NP_353075.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|159139470|gb|AAK85860.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 144
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + L++ VK + L R++
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKANAVRLGGRRVS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+G L+I++ R RSQ+ N DA L+ +I +AA P P + + T
Sbjct: 71 KEGVLMIEASRFRSQERNREDARERLKELILEAAAPPPPVRKAT 114
>gi|167647033|ref|YP_001684696.1| peptidyl-tRNA hydrolase domain-containing protein [Caulobacter sp.
K31]
gi|167349463|gb|ABZ72198.1| Class I peptide chain release factor [Caulobacter sp. K31]
Length = 140
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 92 SRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTR 151
+R+SGPGGQHVN ST +++RF V + L EDVK +L L +RL DG +++ + +R
Sbjct: 20 TRASGPGGQHVNKTSTAIELRFDVRNSPTLPEDVKTRLEALAGSRLTLDGVIVLFAQGSR 79
Query: 152 SQQLNLADAMTTLRNMIWKAA-KPAPQ 177
SQ++N +A L +I +A KP P+
Sbjct: 80 SQEMNRQEARERLVELIKRATEKPKPR 106
>gi|126460812|ref|YP_001041926.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodobacter
sphaeroides ATCC 17029]
gi|221640864|ref|YP_002527126.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodobacter
sphaeroides KD131]
gi|429207513|ref|ZP_19198772.1| Hypothetical protein D516_0925 [Rhodobacter sp. AKP1]
gi|126102476|gb|ABN75154.1| Class I peptide chain release factor [Rhodobacter sphaeroides ATCC
17029]
gi|221161645|gb|ACM02625.1| Class I peptide chain release factor [Rhodobacter sphaeroides
KD131]
gi|428189888|gb|EKX58441.1| Hypothetical protein D516_0925 [Rhodobacter sp. AKP1]
Length = 141
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++SRSSGPGGQ+VN V T V++RF+ + L+ VK +L L R ++G ++I
Sbjct: 14 ELTESFSRSSGPGGQNVNKVETAVELRFEAERSPHLSPAVKARLKRLAGRRWTQEGAIVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+++ TRSQQ N A L M+ +AA AP+
Sbjct: 74 RAEETRSQQRNRELARERLAEMV-RAALVAPK 104
>gi|291614774|ref|YP_003524931.1| class I peptide chain release factor [Sideroxydans lithotrophicus
ES-1]
gi|291584886|gb|ADE12544.1| Class I peptide chain release factor [Sideroxydans lithotrophicus
ES-1]
Length = 137
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 69/106 (65%), Gaps = 7/106 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
VVIP E+++T R+ G GGQ+VN VS+ V +RF + AA+ L + K++L++L+
Sbjct: 8 VVIP-----EREIELTAVRAQGAGGQNVNKVSSAVHLRFDI-AASSLPPEFKERLLQLSD 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWK-AAKPAPQIS 179
R+ +DG ++IK+ R+Q+ N +A+ L++++ A KP P+++
Sbjct: 62 QRITRDGVVVIKAQEFRNQEQNRNEALRRLKSLLMSIAVKPKPRVA 107
>gi|337279595|ref|YP_004619067.1| hypothetical protein Rta_19560 [Ramlibacter tataouinensis TTB310]
gi|334730672|gb|AEG93048.1| conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 136
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E++ T R+ G GGQ+VN VS+ + +RF + ++ L ED K +L+ L R+N+DG L+
Sbjct: 12 HEVETTAMRAQGAGGQNVNKVSSAIHLRFDIPRSS-LPEDHKARLLALRDGRINRDGVLV 70
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
IK+ + RSQ +N A+A L+ ++ A+ APQ T
Sbjct: 71 IKAQQHRSQDMNRAEAFGRLQELVDSVAQ-APQARRAT 107
>gi|410944196|ref|ZP_11375937.1| hypothetical protein GfraN1_07120 [Gluconobacter frateurii NBRC
101659]
Length = 140
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V+P E+L +TY +SGPGGQ+VN V+T +RF + L+E V+ +L+E+ +
Sbjct: 5 VMPGLILKDEDLRVTYILASGPGGQNVNKVATAAQLRFDAAGSPALSERVRTRLLEIAGS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
R +DG +++ R R+Q N D + L MI +AA
Sbjct: 65 RATRDGEIVLTGRRFRTQLRNREDVIERLAAMIREAA 101
>gi|296536878|ref|ZP_06898924.1| peptidyl-tRNA hydrolase domain protein [Roseomonas cervicalis ATCC
49957]
gi|296262795|gb|EFH09374.1| peptidyl-tRNA hydrolase domain protein [Roseomonas cervicalis ATCC
49957]
Length = 142
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
IPV R S EL+ +++R+SG GGQ++ V T V +RF + L E V+++L++L
Sbjct: 4 IPVTA-RLSIDESELEESFARASGAGGQNIQKVETMVQLRFDARHSPSLPEPVRERLLKL 62
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
+R G ++I + + R+Q N DA+ + +I +AAKP P
Sbjct: 63 AGHRATAAGEVVITAQQFRTQARNREDALERMLELIREAAKPPP 106
>gi|424911601|ref|ZP_18334978.1| protein chain release factor B [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392847632|gb|EJB00155.1| protein chain release factor B [Rhizobium leguminosarum bv. viciae
USDA 2370]
Length = 144
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + L E VK + L R++
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLPERVKVNALRLGGRRVS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+G L+I++ R RSQ+ N DA L+ +I +AA P P + + T
Sbjct: 71 KEGVLMIEASRFRSQERNREDARERLKELILEAAAPPPPVRKAT 114
>gi|381395338|ref|ZP_09921041.1| ribosome-associated protein [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379329039|dbj|GAB56174.1| ribosome-associated protein [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 160
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ R+ G GGQ+VN VS+ + +RF +NA+ L + K++L+ LN NR++K+G LII
Sbjct: 37 EVELSAIRAMGSGGQNVNKVSSAIHLRFDINASQ-LPDHYKQKLLALNDNRISKEGVLII 95
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ R+Q+ N DA+ LR ++ A K
Sbjct: 96 KAQSFRTQEKNREDALKRLRMLVISATKE 124
>gi|156098522|ref|XP_001615293.1| Immature colon carcinoma transcript 1 [Plasmodium vivax Sal-1]
gi|148804167|gb|EDL45566.1| Immature colon carcinoma transcript 1, putative [Plasmodium vivax]
Length = 153
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 92 SRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTR 151
+RSSGPGGQ VN TKV +RF V+AA W+ V+ L +++KNRLNK+ LI++ + T
Sbjct: 24 ARSSGPGGQSVNKAETKVQLRFNVDAAKWIPPAVRDNLKKVHKNRLNKNNELIVECEETS 83
Query: 152 SQQLNLADAMTTLRNMIWKA 171
SQ N LR ++ +A
Sbjct: 84 SQISNYKICADKLRALLEEA 103
>gi|398808740|ref|ZP_10567600.1| protein chain release factor B [Variovorax sp. CF313]
gi|398087092|gb|EJL77690.1| protein chain release factor B [Variovorax sp. CF313]
Length = 135
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++I+ R+ G GGQ+VN VS+ V +R+ ++A++ L DVK++L+ L +R+ ++G +
Sbjct: 11 DEVEISAIRAQGAGGQNVNKVSSAVHLRYDIHASS-LPADVKERLLALRDSRITQEGVFV 69
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
+K+ + R++++N ADA+T L+ ++ A P P++ T
Sbjct: 70 LKAQQHRTREMNRADALTRLQAVVDSVAMP-PRVRRAT 106
>gi|328876447|gb|EGG24810.1| hypothetical protein DFA_03055 [Dictyostelium fasciculatum]
Length = 218
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
++ V +PR E+++++++RSSG GGQ+VN V TKV+ RF + A+WL + K+
Sbjct: 18 YSSGFKVHVPR-----EKIELSFARSSGAGGQNVNKVETKVEARFNIYRADWLTDHCKET 72
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
L + LN G +I S + R Q+LN+ D L ++ A+
Sbjct: 73 LRKEYAKNLNSSGDFVITSMKHREQRLNIKDVFEKLERLLTDAS 116
>gi|170722400|ref|YP_001750088.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
putida W619]
gi|169760403|gb|ACA73719.1| Class I peptide chain release factor [Pseudomonas putida W619]
Length = 137
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ +G LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITGEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K + R+Q+ N ADA+ L +I A K
Sbjct: 73 KGQQYRTQEQNRADALARLAELIIAAGK 100
>gi|428313281|ref|YP_007124258.1| protein chain release factor B [Microcoleus sp. PCC 7113]
gi|428254893|gb|AFZ20852.1| protein chain release factor B [Microcoleus sp. PCC 7113]
Length = 138
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 7/104 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V IP + E++++ RS G GGQ+VN V+T + +RF + A+ L E K++L++L+
Sbjct: 8 VSIPEY-----EIEMSAVRSQGAGGQNVNKVATAIHLRFDI-VASSLPERYKERLLKLSD 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
RL KDG ++IK+ RSQ+ N +A+ L+++I A A P P+
Sbjct: 62 QRLTKDGVIVIKAQEHRSQEQNREEALQRLQDLIKNAIALPKPR 105
>gi|77361961|ref|YP_341535.1| peptidyl-tRNA hydrolase domain-containing protein
[Pseudoalteromonas haloplanktis TAC125]
gi|76876872|emb|CAI89089.1| putative protein with Class I peptide chain release factor domain
and peptidyl-tRNA hydrolase domain [Pseudoalteromonas
haloplanktis TAC125]
Length = 137
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T RS G GGQ+VN V++ + +RF +N + L + K++L+ LN +R+ KDG LII
Sbjct: 14 EVELTAVRSQGAGGQNVNKVASAIHLRFDINRSK-LPDFYKERLLALNDSRITKDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q+LN DA L+++I A K
Sbjct: 73 KAQSHRTQELNREDAFKRLKDLIISATK 100
>gi|421749322|ref|ZP_16186777.1| hypothetical protein B551_21609 [Cupriavidus necator HPC(L)]
gi|409771827|gb|EKN54013.1| hypothetical protein B551_21609 [Cupriavidus necator HPC(L)]
Length = 132
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
+PV IP Y IT R+ G GGQ++N VS V +RF V A++ L +D K++L++L
Sbjct: 1 MPVAIPHHEY-----QITAIRAQGAGGQNINKVSNAVHLRFDVRASS-LADDHKQRLLQL 54
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ +R+ +DG ++IK+ + RS +LN +A+ L ++
Sbjct: 55 HDHRITRDGVIVIKAQQHRSLELNRDEAVRRLHELV 90
>gi|335033805|ref|ZP_08527170.1| hypothetical protein AGRO_1149 [Agrobacterium sp. ATCC 31749]
gi|333795096|gb|EGL66428.1| hypothetical protein AGRO_1149 [Agrobacterium sp. ATCC 31749]
Length = 144
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + L++ VK + L R++
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKANALRLGGRRVS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+G L+I++ R RSQ+ N DA L+ +I +AA P P + + T
Sbjct: 71 KEGVLMIEASRFRSQERNREDARERLKELILEAAAPPPPVRKAT 114
>gi|384221603|ref|YP_005612769.1| hypothetical protein BJ6T_79350 [Bradyrhizobium japonicum USDA 6]
gi|354960502|dbj|BAL13181.1| hypothetical protein BJ6T_79350 [Bradyrhizobium japonicum USDA 6]
Length = 172
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 77 IPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNR 136
IPR + L+I + R+SGPGGQ+VN VST +RF L ED +L + R
Sbjct: 14 IPRTRHRRGRLEIGFVRASGPGGQNVNKVSTSAQLRFDTRKLT-LPEDAAIRLARIAGQR 72
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
+ K G ++I + R R+Q+ N DA+ L ++ KA A+P P+
Sbjct: 73 MTKGGVIVIHAQRFRTQERNRQDAVGCLVEILKKAVARPRPR 114
>gi|319792789|ref|YP_004154429.1| class i peptide chain release factor [Variovorax paradoxus EPS]
gi|315595252|gb|ADU36318.1| Class I peptide chain release factor [Variovorax paradoxus EPS]
Length = 135
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++I+ R+ G GGQ+VN VS+ V +R+ ++A++ L DVK++L+ L +R+ ++G +
Sbjct: 11 DEVEISAIRAQGAGGQNVNKVSSAVHLRYDIHASS-LPADVKERLLALRDSRITQEGVFV 69
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
+K+ + R+Q++N ADA+ L+ ++ A P P++ T
Sbjct: 70 LKAQQHRTQEMNRADALARLQAVVDTVATP-PRVRRAT 106
>gi|372488710|ref|YP_005028275.1| protein chain release factor B [Dechlorosoma suillum PS]
gi|359355263|gb|AEV26434.1| protein chain release factor B [Dechlorosoma suillum PS]
Length = 132
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I R+ G GGQ+VN VS V +RF V A++ L E++K +L+ RL+ DG ++I
Sbjct: 9 EVEIVAIRAQGAGGQNVNKVSNAVHLRFDVGASS-LPEEIKARLLARRDQRLSSDGVIVI 67
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + RS + N DA+ LR MI AA
Sbjct: 68 KAQKHRSLERNREDALVRLREMIAAAA 94
>gi|23013715|ref|ZP_00053581.1| COG1186: Protein chain release factor B [Magnetospirillum
magnetotacticum MS-1]
Length = 139
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R + +E++ ++ RSSGPGGQ+VN V T V +RF + L +DV +L +L +
Sbjct: 4 ITHRIAIDEKEIEESFVRSSGPGGQNVNKVETAVQLRFDARRSPSLPDDVSVRLQKLAGS 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL DG +II + RSQ+ N A+A+ L MI +AA
Sbjct: 64 RLTLDGVIIIIAQTHRSQERNRAEALERLVEMIREAA 100
>gi|340502646|gb|EGR29317.1| hypothetical protein IMG5_158680 [Ichthyophthirius multifiliis]
Length = 140
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 40 KTPTPDQVKAPDGLKFNGVIPV----KAPDGLKFNGVIPVVIPRFSYITEELDITYSRSS 95
KT Q + PD F + + + + +K N + +VIP ++L+ +SRS
Sbjct: 14 KTIIELQEQHPDKEYFKKQLEIAQKNEEIESIKLN-LKDIVIP-----IDQLETRFSRSQ 67
Query: 96 GPGGQHVNSVSTKVDIRFKVNAANW-LNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQ 154
G GGQH+N ++K +IRF + A W +NED+K + + K + +D +I S RSQ
Sbjct: 68 GAGGQHLNKTNSKAEIRFNIGNAKWFINEDIKNKFRKQYKQYITQDDQFVITSQIGRSQD 127
Query: 155 LNLADAMTTLRNM 167
NL DA+ L++M
Sbjct: 128 QNLKDAVKKLQDM 140
>gi|75908191|ref|YP_322487.1| peptidyl-tRNA hydrolase domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75701916|gb|ABA21592.1| Class I peptide chain release factor [Anabaena variabilis ATCC
29413]
Length = 137
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ RS G GGQ+VN VST + +RF + A++ L K+QL++LN R+N++G ++I
Sbjct: 14 EIEISAIRSQGAGGQNVNKVSTAIHLRFNIEASS-LPAFYKEQLLKLNDRRINQEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L+++I A
Sbjct: 73 KAQEHRSQEQNKEEALQRLKDLIKSA 98
>gi|418298036|ref|ZP_12909876.1| hypothetical protein ATCR1_10963 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355537406|gb|EHH06666.1| hypothetical protein ATCR1_10963 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 144
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + L++ VK + L R++
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLSDRVKTNALRLGGRRVS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+G L+I++ R RSQ+ N DA L+ +I +AA P P + + T
Sbjct: 71 KEGVLMIEASRFRSQERNREDARERLKELILEAAAPPPPVRKAT 114
>gi|319762728|ref|YP_004126665.1| class i peptide chain release factor [Alicycliphilus denitrificans
BC]
gi|330824869|ref|YP_004388172.1| class I peptide chain release factor [Alicycliphilus denitrificans
K601]
gi|317117289|gb|ADU99777.1| Class I peptide chain release factor [Alicycliphilus denitrificans
BC]
gi|329310241|gb|AEB84656.1| Class I peptide chain release factor [Alicycliphilus denitrificans
K601]
Length = 141
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A+ L DVK++L+ L +R+ + G L+I
Sbjct: 16 EVELTAMRAQGAGGQNVNKVSSAVHLRFDI-VASSLPGDVKQRLLALRDSRITQQGVLVI 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+ + R+Q+ N DA+ L+ ++ A+P P++ T
Sbjct: 75 KAQQYRTQEANRLDALARLQALVDSVARP-PRVRRAT 110
>gi|104781193|ref|YP_607691.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
entomophila L48]
gi|95110180|emb|CAK14887.1| putative protein chain release factor B [Pseudomonas entomophila
L48]
Length = 137
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + A++ L E K +L+ L +R+ DG LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKARLLALRDSRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRTDALARLAELIIAAGK 100
>gi|409427852|ref|ZP_11262340.1| hypothetical protein PsHYS_24330 [Pseudomonas sp. HYS]
Length = 137
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++T R+ G GGQ+VN VS+ V +RF A++ L K++L+ L+ +R+ +DG +I
Sbjct: 13 DEIELTAIRAQGAGGQNVNKVSSAVHLRFDTQASS-LPAFYKERLLALSDSRITRDGVII 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N ADA+ LR +I A K
Sbjct: 72 IKAQQFRTQEQNRADALERLRELILSATK 100
>gi|241149276|ref|XP_002406070.1| immature colon carcinoma transcript 1 protein, putative [Ixodes
scapularis]
gi|215493798|gb|EEC03439.1| immature colon carcinoma transcript 1 protein, putative [Ixodes
scapularis]
Length = 171
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 38/170 (22%)
Query: 10 LISNQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLK- 68
++N ++ R YKS++SLDK+YP+S + N V ++AP
Sbjct: 17 FVANTPSLFVRSYKSAVSLDKIYPDSDL------------------NHVKSIEAPQSTNE 58
Query: 69 -FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKK 127
F+G IP+ +D+ R + P +V++R +++A+W+ ++
Sbjct: 59 VFSGYIPM---------NRVDV---RENNPDNPF------RVELRVHLDSADWIPHSARE 100
Query: 128 QLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+L +L K ++ DG L++ SD+T+ + +N+AD + LR M+ +A KP P+
Sbjct: 101 RLKKLAKVYIDADGKLVVSSDKTKKKLVNVADCVDKLRIMVREACKPPPE 150
>gi|430808088|ref|ZP_19435203.1| hypothetical protein D769_17449 [Cupriavidus sp. HMR-1]
gi|429499582|gb|EKZ97996.1| hypothetical protein D769_17449 [Cupriavidus sp. HMR-1]
Length = 137
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E DIT R+ G GGQ++N VS V +R+ V A++ L D K++L+ L+ +R+ +DG ++
Sbjct: 13 QEYDITAIRAQGAGGQNINKVSNAVHLRYDVRASS-LEPDHKERLLALHDHRITRDGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
IK+ + RS +LN +A+ L ++ A+P P++ T
Sbjct: 72 IKAQQHRSLELNREEAIRRLHELVRSVAEP-PRVRRAT 108
>gi|332187078|ref|ZP_08388818.1| RF-1 domain protein [Sphingomonas sp. S17]
gi|332012778|gb|EGI54843.1| RF-1 domain protein [Sphingomonas sp. S17]
Length = 141
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 72 VIPVVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLI 130
+IPV R I E E+ +++R+SGPGGQHVN+ + V +RF V + L E VK +L
Sbjct: 3 LIPVT--RAIAIDEREIGESFTRASGPGGQHVNTTDSAVLLRFDVMGSPSLPEAVKMRLA 60
Query: 131 ELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L RL++DG L +++D +RSQ++N + L +I +A
Sbjct: 61 VLAGARLSRDGVLTLRADASRSQEMNRREVRERLIGLIREA 101
>gi|94312399|ref|YP_585609.1| hypothetical protein Rmet_3468 [Cupriavidus metallidurans CH34]
gi|93356251|gb|ABF10340.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 138
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E DIT R+ G GGQ++N VS V +R+ V A++ L D K++L+ L+ +R+ +DG ++
Sbjct: 14 QEYDITAIRAQGAGGQNINKVSNAVHLRYDVRASS-LEPDHKERLLALHDHRITRDGVVV 72
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
IK+ + RS +LN +A+ L ++ A+P P++ T
Sbjct: 73 IKAQQHRSLELNREEAIRRLHELVRSVAEP-PRVRRAT 109
>gi|374302099|ref|YP_005053738.1| class I peptide chain release factor [Desulfovibrio africanus str.
Walvis Bay]
gi|332555035|gb|EGJ52079.1| Class I peptide chain release factor [Desulfovibrio africanus str.
Walvis Bay]
Length = 148
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 9/105 (8%)
Query: 71 GVIP----VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVK 126
G IP V IP +EL +++RS GPGGQ+VN V+TK +RF V + L E+ K
Sbjct: 8 GPIPITNQVAIP-----EQELSFSFARSGGPGGQNVNKVNTKAVLRFDVVGSQSLGEEDK 62
Query: 127 KQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+ ++E +RL K+G L++ SD TRSQ+ N + L+ ++ A
Sbjct: 63 RLILERLASRLTKEGELVLASDATRSQEDNKRLTVLKLQQLLRAA 107
>gi|254469429|ref|ZP_05082834.1| class I peptide chain release factor [Pseudovibrio sp. JE062]
gi|211961264|gb|EEA96459.1| class I peptide chain release factor [Pseudovibrio sp. JE062]
Length = 144
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V RFS ++ + R+SGPGGQ+VN VS+ V +RF ++ L +D+K +L ++ +
Sbjct: 9 VNERFSIEERDIKEDFIRASGPGGQNVNKVSSAVQLRFNLDGNATLPDDLKSRLRKIAGS 68
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL G +++ +DR R+Q+ N DA+ L +I KAA
Sbjct: 69 RLTLKGEIVLTADRFRTQERNREDALERLLELIRKAA 105
>gi|304313232|ref|YP_003812830.1| hypothetical protein HDN1F_36200 [gamma proteobacterium HdN1]
gi|301798965|emb|CBL47203.1| conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 137
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+++T RS G GGQ+VN VS+ + +RF +NA+ L + K++L+ L R+++DG +I
Sbjct: 13 EEIELTAIRSQGAGGQNVNKVSSAIHLRFDINAST-LPDFYKERLLALKDRRISQDGVII 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
IK+ R R+Q+ N DA+ L+ +I A
Sbjct: 72 IKAQRFRTQEKNRDDALERLQALIRSAG 99
>gi|66823703|ref|XP_645206.1| hypothetical protein DDB_G0272142 [Dictyostelium discoideum AX4]
gi|60473277|gb|EAL71223.1| hypothetical protein DDB_G0272142 [Dictyostelium discoideum AX4]
Length = 210
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+L++ +SRSSG GGQ+VN V+TKV++RF +N A+W+ VK +N +N D I
Sbjct: 85 EKLNLQFSRSSGAGGQNVNKVNTKVEVRFDLNKADWIPPYVK-----VNMRNVNDDDEFI 139
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
I S + R Q LN+ DAM L +++
Sbjct: 140 ITSSKHRYQHLNINDAMDKLDDIL 163
>gi|301631267|ref|XP_002944721.1| PREDICTED: uncharacterized 15.2 kDa protein in pcaJ 3'region-like
[Xenopus (Silurana) tropicalis]
Length = 140
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 69 FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
P+ +P E+ IT R+ G GGQ+VN VS+ V +RF + A++ L V+++
Sbjct: 1 MGSAFPLQVP-----EHEVQITAMRAQGAGGQNVNKVSSAVHLRFDITASS-LPLPVQQR 54
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
L+ L R+ +DG LIIK+ + RSQ+LN ADA L ++ A P
Sbjct: 55 LLALRDGRITQDGVLIIKAQQHRSQELNRADAWARLLALVNSVAVP 100
>gi|427708447|ref|YP_007050824.1| class I peptide chain release factor [Nostoc sp. PCC 7107]
gi|427360952|gb|AFY43674.1| Class I peptide chain release factor [Nostoc sp. PCC 7107]
Length = 137
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+I+ RS G GGQ+VN V+T + +RF + A++ L K+QL++LN R+ +DG ++I
Sbjct: 14 ELEISAIRSQGAGGQNVNKVATAIHLRFDIEASS-LPAFYKQQLLKLNDRRITQDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L+ +I A
Sbjct: 73 KAQEHRSQEQNREEALQRLKELILSA 98
>gi|163757495|ref|ZP_02164584.1| hypothetical protein HPDFL43_18832 [Hoeflea phototrophica DFL-43]
gi|162284997|gb|EDQ35279.1| hypothetical protein HPDFL43_18832 [Hoeflea phototrophica DFL-43]
Length = 144
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 58/87 (66%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN V+T V +RF + + L + VK I L +R++K+G LI+
Sbjct: 18 ELSESFIRASGPGGQNVNKVATAVQLRFDITNSPSLTDRVKANAIRLGGSRVSKEGVLIL 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
+++R R+Q+ N ADA L ++ KA+
Sbjct: 78 EANRFRTQERNRADARERLVELLDKAS 104
>gi|393777219|ref|ZP_10365512.1| hypothetical protein MW7_2201 [Ralstonia sp. PBA]
gi|392715920|gb|EIZ03501.1| hypothetical protein MW7_2201 [Ralstonia sp. PBA]
Length = 134
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
F E++IT R+ G GGQ+VN VS+ V +R+ + A++ L +D K++L+ L+ +R+ +
Sbjct: 5 FQIPLHEVEITAIRAQGAGGQNVNKVSSAVHLRYDIRASS-LPDDHKQRLLALHDHRITR 63
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+G ++IK+ RSQ+LN A+A+ L ++ A
Sbjct: 64 EGVIVIKAQAHRSQELNRAEALQRLHALVESVA 96
>gi|257094213|ref|YP_003167854.1| Class I peptide chain release factor [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046737|gb|ACV35925.1| Class I peptide chain release factor [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 139
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++ R+ G GGQ+VN VS + +RF + A++ L ED+K+ L +L R++ +G +I
Sbjct: 13 DEIEFLAIRAQGAGGQNVNKVSNAIHLRFDIGASS-LPEDLKESLRQLRDQRISNEGVVI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
IK+ RS + N DA+T LR +I +AA PAP+
Sbjct: 72 IKAQAHRSLERNRLDALTRLRELIARAAYTPAPR 105
>gi|241751912|ref|XP_002400991.1| immature colon carcinoma transcript 1 protein, putative [Ixodes
scapularis]
gi|215508279|gb|EEC17733.1| immature colon carcinoma transcript 1 protein, putative [Ixodes
scapularis]
Length = 171
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 87/173 (50%), Gaps = 38/173 (21%)
Query: 7 FHKLISNQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDG 66
F ++N ++ R YKS++SLDK+YP+S + N V P++AP
Sbjct: 14 FPNFVANTFSLFVRSYKSAVSLDKIYPDSDL------------------NHVKPIEAPQS 55
Query: 67 LK--FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNED 124
F+G IP+ +D+ P +V++R +++A+W+ +
Sbjct: 56 TNEVFSGYIPM---------NPVDVREKNPDNP---------FRVELRVHLDSADWIPQS 97
Query: 125 VKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+++L +L K ++ DG L++ D+T+ + +++AD + LR M+ +A KP P+
Sbjct: 98 GRERLKKLAKVYIDADGKLVVSLDKTKKKLVHVADCVDKLRIMVREACKPPPE 150
>gi|198430443|ref|XP_002130787.1| PREDICTED: similar to Immature colon carcinoma transcript 1 isoform
1 [Ciona intestinalis]
Length = 201
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIK 146
+ + +S+SS PGGQHVN+ +K +RF + A W+ +V+K + E +N++ + G LI+
Sbjct: 68 VKVEFSKSSKPGGQHVNTTLSKALVRFNLMKAEWIPFEVRKIMAEKYQNKITRTGDLIVW 127
Query: 147 SDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
+ +R Q NL + + MI +A KP ED I +
Sbjct: 128 DEESRYQMRNLQSCLAKVEEMIMEAQKPPDTSKEDRIAEL 167
>gi|397698193|ref|YP_006536076.1| hypothetical protein T1E_5461 [Pseudomonas putida DOT-T1E]
gi|421520986|ref|ZP_15967645.1| hypothetical protein PPUTLS46_04163 [Pseudomonas putida LS46]
gi|397334923|gb|AFO51282.1| hypothetical protein T1E_5461 [Pseudomonas putida DOT-T1E]
gi|402754926|gb|EJX15401.1| hypothetical protein PPUTLS46_04163 [Pseudomonas putida LS46]
Length = 137
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + +++ L E K +L+ L +R+ DG LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPSSS-LPEFYKARLLALRDSRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K + R+Q+ N ADA+ L +I A K
Sbjct: 73 KGQQYRTQEQNRADALARLAELIINAGK 100
>gi|386812094|ref|ZP_10099319.1| peptide chain release factor [planctomycete KSU-1]
gi|386404364|dbj|GAB62200.1| peptide chain release factor [planctomycete KSU-1]
Length = 141
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ + R+SGPGGQ+VN V+T V +RF + L +DV+ +LI L R+ + G LII
Sbjct: 14 EIQCEFIRASGPGGQNVNKVATAVQLRFDAGNSPSLPDDVRNRLIHLAGKRITEGGVLII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+ R R+Q+ N DA+ +I +AA+
Sbjct: 74 NARRFRTQEKNRQDAIDRFVELIRRAAE 101
>gi|423017396|ref|ZP_17008117.1| hypothetical protein AXXA_23255 [Achromobacter xylosoxidans AXX-A]
gi|338779573|gb|EGP44011.1| hypothetical protein AXXA_23255 [Achromobacter xylosoxidans AXX-A]
Length = 138
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
YI E E++ + R+ G GGQ+VN VS+ V +RF V A++ L ++K+ L ++ +R++KD
Sbjct: 9 YIDEREIEFSMIRAQGAGGQNVNKVSSAVHLRFDVRASS-LPAEIKEALGAMSDHRISKD 67
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G ++IKS RSQ N A+A+ L M+ AAK
Sbjct: 68 GVIVIKSQSFRSQDKNRAEAIERLVGMVRAAAK 100
>gi|170768661|ref|ZP_02903114.1| peptidyl-tRNA hydrolase domain protein [Escherichia albertii
TW07627]
gi|170122765|gb|EDS91696.1| peptidyl-tRNA hydrolase domain protein [Escherichia albertii
TW07627]
Length = 140
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R + I + EL+IT RS G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHAVIPDGELEITAIRSQGAGGQHVNKGSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLN----LADAMTTLRNM--IWKAAKP 174
+ ++ DG ++IK+ RSQ+LN LA MT ++ + + KA +P
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLMTVIKELTTVQKARRP 107
>gi|121605636|ref|YP_982965.1| peptidyl-tRNA hydrolase domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120594605|gb|ABM38044.1| Class I peptide chain release factor [Polaromonas naphthalenivorans
CJ2]
Length = 134
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
+F E++++ R+ G GGQ+VN VS+ V +RF + AA+ L +++K++L+ L+ +R+
Sbjct: 3 KFLVDEREVELSAIRAQGAGGQNVNKVSSAVHLRFDI-AASSLPDEIKERLLCLSDSRIT 61
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
++G L++K+ + R+Q++N ADA+ L+ +I + P
Sbjct: 62 QEGVLVLKAQQHRTQEMNRADALARLQQVIDGVSNP 97
>gi|418409050|ref|ZP_12982363.1| hypothetical protein AT5A_17571 [Agrobacterium tumefaciens 5A]
gi|358004367|gb|EHJ96695.1| hypothetical protein AT5A_17571 [Agrobacterium tumefaciens 5A]
Length = 144
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + L + VK + L R++
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLPDRVKANALRLGGRRVS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+G L+I++ R RSQ+ N DA L+ +I +AA P P + + T
Sbjct: 71 KEGVLMIEASRFRSQERNREDARERLKELILEAAAPPPPVRKAT 114
>gi|26989665|ref|NP_745090.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
putida KT2440]
gi|24984552|gb|AAN68554.1|AE016487_8 peptidyl-tRNA hydrolase domain protein [Pseudomonas putida KT2440]
Length = 137
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + A++ L E K +L+ L +R+ DG LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKARLLALRDSRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K + R+Q+ N DA+ L +I A K
Sbjct: 73 KGQQYRTQEQNRVDALARLAELIITAGK 100
>gi|386012278|ref|YP_005930555.1| hypothetical protein PPUBIRD1_2729 [Pseudomonas putida BIRD-1]
gi|313498984|gb|ADR60350.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 137
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + A++ L E K +L+ L +R+ DG LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKARLLALRDSRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K + R+Q+ N DA+ L +I A K
Sbjct: 73 KGQQYRTQEQNRVDALARLAELIITAGK 100
>gi|398879726|ref|ZP_10634813.1| protein chain release factor B [Pseudomonas sp. GM67]
gi|398884730|ref|ZP_10639657.1| protein chain release factor B [Pseudomonas sp. GM60]
gi|424922030|ref|ZP_18345391.1| Protein chain release factor B [Pseudomonas fluorescens R124]
gi|398193710|gb|EJM80806.1| protein chain release factor B [Pseudomonas sp. GM60]
gi|398195690|gb|EJM82721.1| protein chain release factor B [Pseudomonas sp. GM67]
gi|404303190|gb|EJZ57152.1| Protein chain release factor B [Pseudomonas fluorescens R124]
Length = 137
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEANRADALERLTELILSATK 100
>gi|410622485|ref|ZP_11333319.1| ribosome-associated protein [Glaciecola pallidula DSM 14239 = ACAM
615]
gi|410158003|dbj|GAC28693.1| ribosome-associated protein [Glaciecola pallidula DSM 14239 = ACAM
615]
Length = 138
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E +T +RS G GGQHVN V+T + +RF +N ++ L + +K +L+E N R+ DG ++I
Sbjct: 15 EFSLTATRSQGAGGQHVNKVATAIYLRFDINQSS-LPDKIKTKLLESNDTRITSDGVMVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
++ R+Q+ N DA+ L N+I ++ P
Sbjct: 74 RAQNHRTQEQNKRDAIKRLANVIKESTYEKP 104
>gi|74317541|ref|YP_315281.1| hypothetical protein Tbd_1523 [Thiobacillus denitrificans ATCC
25259]
gi|74057036|gb|AAZ97476.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 141
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ + R+SGPGGQ+VN VS+ V +RF V + L + V+ +L+ L R+ +DG LII
Sbjct: 14 EIQEDFVRASGPGGQNVNKVSSAVQLRFDVAHSPSLPQPVRDRLLVLAGRRVTQDGVLII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+++R RSQ+ N DA+ L +I +A +
Sbjct: 74 EAERYRSQRRNRDDALERLLALIREACE 101
>gi|398994238|ref|ZP_10697142.1| protein chain release factor B [Pseudomonas sp. GM21]
gi|398132531|gb|EJM21803.1| protein chain release factor B [Pseudomonas sp. GM21]
Length = 137
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VST V +RF + A++ L E K++L+ L +R+ +G LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSTAVHLRFDIPASS-LPEFYKERLLALRDSRITSEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEANRADALERLTELILSATK 100
>gi|423698857|ref|ZP_17673347.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas fluorescens
Q8r1-96]
gi|387996119|gb|EIK57449.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas fluorescens
Q8r1-96]
Length = 137
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSATK 100
>gi|359437125|ref|ZP_09227198.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20311]
gi|359443972|ref|ZP_09233780.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20439]
gi|358028186|dbj|GAA63447.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20311]
gi|358042186|dbj|GAA70029.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20439]
Length = 137
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ RS G GGQ+VN V++ + +RF +N + L E K++L+ LN +R+ K+G L+I
Sbjct: 14 EVELSAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPEFYKERLLALNDSRITKEGVLVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q+LN DA+ L+++I A K
Sbjct: 73 KAQSHRTQELNREDALKRLKDLILSATK 100
>gi|17232188|ref|NP_488736.1| peptidyl-tRNA hydrolase domain-containing protein [Nostoc sp. PCC
7120]
gi|17133833|dbj|BAB76395.1| alr4696 [Nostoc sp. PCC 7120]
Length = 137
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ RS G GGQ+VN VST + +RF + A++ L K+QL++LN R+N++G ++I
Sbjct: 14 EIEISAIRSQGAGGQNVNKVSTAIHLRFNIEASS-LPTFYKEQLLKLNDRRINQEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L+ +I A
Sbjct: 73 KAQEHRSQEQNKEEALQRLKELIKGA 98
>gi|393911931|gb|EFO22466.2| hypothetical protein LOAG_06021 [Loa loa]
Length = 175
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 17/114 (14%)
Query: 65 DGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNED 124
+G +F G IPV ++++ + RSSGPGGQ+VN V+TK IRF +N ANWL+
Sbjct: 29 NGDEFIGWIPV---------DKIEKRFMRSSGPGGQNVNMVNTKCQIRFNLNEANWLSSR 79
Query: 125 V----KKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
+ +K+ + L LNK ++I SD++R Q N D LR ++ + K
Sbjct: 80 IQDIFRKRFVRL----LNKQHDVVISSDKSRIQAENQDDCFKKLRALLLECNKE 129
>gi|325982845|ref|YP_004295247.1| class I peptide chain release factor [Nitrosomonas sp. AL212]
gi|325532364|gb|ADZ27085.1| Class I peptide chain release factor [Nitrosomonas sp. AL212]
Length = 139
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I RS G GGQ+VN VST + +RF +NA++ L E+ K++L+ L +R++ +G +II
Sbjct: 14 EIEIQAVRSQGAGGQNVNKVSTAIHLRFDINASS-LPENYKERLLNLKDSRISSEGIVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+RSQ N DA+ L+ +I
Sbjct: 73 KAQRSRSQIKNREDALNRLQALI 95
>gi|359441817|ref|ZP_09231703.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20429]
gi|392536049|ref|ZP_10283186.1| hypothetical protein ParcA3_18708 [Pseudoalteromonas arctica A
37-1-2]
gi|358036319|dbj|GAA67952.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20429]
Length = 137
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T RS G GGQ+VN V++ + +RF +N + L + K++L+ LN R+ K+G LII
Sbjct: 14 ELELTAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPDFYKERLLALNDTRITKEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ R+Q+LN DA+ L+++I A
Sbjct: 73 KAQSHRTQELNREDALKRLKDLILSA 98
>gi|330811299|ref|YP_004355761.1| hypothetical protein PSEBR_a4350 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379407|gb|AEA70757.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 137
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSATK 100
>gi|85001405|ref|XP_955421.1| hypothetical protein [Theileria annulata]
gi|65303567|emb|CAI75945.1| hypothetical protein TA17965 [Theileria annulata]
Length = 96
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++L +T SRSSGPGGQ VN TKV IRF V +A+WL ED+K + + +NK ++ + G I
Sbjct: 23 KKLQVTTSRSSGPGGQSVNKSETKVQIRFNVQSADWLTEDLKDKFLIVNKAKITQKGDFI 82
Query: 145 IKSD 148
++ D
Sbjct: 83 VECD 86
>gi|389583717|dbj|GAB66451.1| immature colon carcinoma transcript 1 [Plasmodium cynomolgi strain
B]
Length = 153
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%)
Query: 92 SRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTR 151
+RSSGPGGQ VN TKV +RF V+ A W+ VK L +++KNRLNK+ LII+ + T
Sbjct: 24 ARSSGPGGQSVNKAETKVQLRFNVDEAKWIPPAVKDNLKKVHKNRLNKNNELIIECEETP 83
Query: 152 SQQLNLADAMTTLRNMIWKA 171
SQ N LR ++ +A
Sbjct: 84 SQISNYKICADKLRALLEEA 103
>gi|429334907|ref|ZP_19215554.1| hypothetical protein CSV86_23614 [Pseudomonas putida CSV86]
gi|428760314|gb|EKX82581.1| hypothetical protein CSV86_23614 [Pseudomonas putida CSV86]
Length = 137
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+++ R+ G GGQ+VN VS+ V +RF A++ L K++L++L+ +R+ +DG +I
Sbjct: 13 EEIELNAIRAQGAGGQNVNKVSSAVHLRFDSQASS-LPPFYKERLLQLSDSRITRDGVII 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N ADA+ LR +I A K
Sbjct: 72 IKAQQYRTQEQNRADALERLRELILAAVK 100
>gi|448243634|ref|YP_007407687.1| petidyl-tRNA hydrolase, ribosome-attached [Serratia marcescens WW4]
gi|445213998|gb|AGE19668.1| petidyl-tRNA hydrolase, ribosome-attached [Serratia marcescens WW4]
gi|453065501|gb|EMF06463.1| hypothetical protein F518_08160 [Serratia marcescens VGH107]
Length = 137
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + DG +II
Sbjct: 14 ELELTAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLALNHHLITADGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+LN A+ L +I +A
Sbjct: 73 KAQEYRSQELNREAALARLVALIQQA 98
>gi|91787737|ref|YP_548689.1| peptidyl-tRNA hydrolase domain-containing protein [Polaromonas sp.
JS666]
gi|91696962|gb|ABE43791.1| Class I peptide chain release factor [Polaromonas sp. JS666]
Length = 135
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 77 IPRFSYITEELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+P ++ +E ++ +S R+ G GGQ+VN VS+ V +RF + AA+ L ++VK +L+ L+
Sbjct: 1 MPTSKFLVDEREVEFSAIRAQGAGGQNVNKVSSAVHLRFDI-AASSLPDEVKGRLLALSD 59
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
+R+ ++G ++K+ + R+Q++N +DA+ L+ ++ + P
Sbjct: 60 SRITQEGVFVLKAQQHRTQEMNRSDALMRLQEVVDSVSSP 99
>gi|423093954|ref|ZP_17081750.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas fluorescens
Q2-87]
gi|397887661|gb|EJL04144.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas fluorescens
Q2-87]
Length = 137
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSATK 100
>gi|256830627|ref|YP_003159355.1| class I peptide chain release factor [Desulfomicrobium baculatum
DSM 4028]
gi|256579803|gb|ACU90939.1| Class I peptide chain release factor [Desulfomicrobium baculatum
DSM 4028]
Length = 137
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ PR E++ + + R+SGPGGQ+VN VST V +R +++A + L+ED +L L
Sbjct: 3 ITPRVHIEDEDIRLEFIRASGPGGQNVNKVSTAVRLRVRLDAIHGLDEDGLARLEALAGR 62
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
RL + L+I+++ R+Q+ N A+ L +++ +AA +P P+
Sbjct: 63 RLTVEKELVIRAESHRTQEGNRKAALERLAHLVAQAAVRPKPR 105
>gi|430005786|emb|CCF21589.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Rhizobium sp.]
Length = 144
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + G GGQHVN VST V + F + + L + +K I L R++
Sbjct: 11 RITIAGWELTEQFVLAGGAGGQHVNKVSTAVQLFFNLADSPSLPDRIKAAAIRLAGRRMS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
KDG L+I+++R RSQ N DA L+ +I KA++P P
Sbjct: 71 KDGVLMIEANRFRSQDRNREDARERLKELILKASEPPP 108
>gi|398861409|ref|ZP_10617038.1| protein chain release factor B [Pseudomonas sp. GM79]
gi|398233070|gb|EJN19014.1| protein chain release factor B [Pseudomonas sp. GM79]
Length = 137
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSATK 100
>gi|289624554|ref|ZP_06457508.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289650391|ref|ZP_06481734.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422581366|ref|ZP_16656509.1| hypothetical protein PSYAE_02962 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330866216|gb|EGH00925.1| hypothetical protein PSYAE_02962 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 137
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF +NA++ L K++L+ L+ +R+ +DG +++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPPFYKERLLALSDSRITRDGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAK 100
>gi|260432107|ref|ZP_05786078.1| class I peptide chain release factor [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415935|gb|EEX09194.1| class I peptide chain release factor [Silicibacter lacuscaerulensis
ITI-1157]
Length = 139
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ ++ R+SGPGGQ+VN VST V++RF+ + L + VK +L L R KDG +II
Sbjct: 14 EMTESFIRASGPGGQNVNKVSTAVELRFEAARSPSLPDPVKARLKRLAGRRWTKDGAIII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQIS 179
+ D TRSQ N A L +I KA KP +I+
Sbjct: 74 QCDETRSQARNREIARARLAELIGKALVKPKRRIA 108
>gi|254460840|ref|ZP_05074256.1| class I peptide chain release factor [Rhodobacterales bacterium
HTCC2083]
gi|206677429|gb|EDZ41916.1| class I peptide chain release factor [Rhodobacteraceae bacterium
HTCC2083]
Length = 155
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P EL T++R+SGPGGQ+VN VST V++RF+ + L VK +L L
Sbjct: 19 ITPTLEIADWELTETFTRASGPGGQNVNKVSTAVELRFEAERSPSLTGPVKSRLKRLAGR 78
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R DG L+I+++ RSQ N A A L +I KA
Sbjct: 79 RWTLDGALVIRAEEERSQARNRAIARERLAELIRKA 114
>gi|417858410|ref|ZP_12503467.1| hypothetical protein Agau_C101058 [Agrobacterium tumefaciens F2]
gi|338824414|gb|EGP58381.1| hypothetical protein Agau_C101058 [Agrobacterium tumefaciens F2]
Length = 153
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + L + VK + L R++
Sbjct: 20 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDIANSPSLPDRVKANALRLGGRRVS 79
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+G L+I++ R RSQ+ N DA L+ +I +AA P P + + T
Sbjct: 80 KEGVLMIEASRFRSQERNREDARDRLKELILEAAAPPPPVRKAT 123
>gi|395763110|ref|ZP_10443779.1| hypothetical protein JPAM2_15347 [Janthinobacterium lividum PAMC
25724]
Length = 132
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+ GPGGQ+VN VS+ + +RF + AA+ L E K++L+ L +R++KDG L++
Sbjct: 9 EVEFSAIRAQGPGGQNVNKVSSAIHLRFPI-AASSLPEAYKERLLALRDSRISKDGVLVL 67
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ ++RSQ+ N +A+ L+++I
Sbjct: 68 KAQQSRSQEQNKEEALRRLQDII 90
>gi|34498207|ref|NP_902422.1| peptidyl-tRNA hydrolase domain protein [Chromobacterium violaceum
ATCC 12472]
gi|34104061|gb|AAQ60421.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 135
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
Query: 82 YITEELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAAN---WLNEDVKKQLIELNKNR 136
Y+ +E ++T++ R+ G GGQ+VN VS+ V +RF + A++ WL E +L+ L+ R
Sbjct: 6 YLVKEDEVTFTAMRAQGAGGQNVNKVSSAVHLRFDIAASSLPAWLRE----RLLGLSDQR 61
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
L+KDG L+IK+ + R+Q+ N ADA+ L+ ++
Sbjct: 62 LSKDGVLVIKAQQHRTQEQNRADAIDRLQALV 93
>gi|134093323|ref|YP_001098398.1| peptide chain release factor [Herminiimonas arsenicoxydans]
gi|133737226|emb|CAL60269.1| putative peptide chain release factor [Herminiimonas
arsenicoxydans]
Length = 136
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+D+ R+ GPGGQ+VN V+T + +RF + AA+ L + +K++L+ LN R++KDG ++I
Sbjct: 13 EIDLIAIRAQGPGGQNVNKVATAIHLRFDI-AASSLPDHLKERLLLLNDQRISKDGVIVI 71
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ + RSQ+ + +A+ L+ +I
Sbjct: 72 KAQQGRSQEQSREEALRRLQELI 94
>gi|443477683|ref|ZP_21067510.1| Class I peptide chain release factor [Pseudanabaena biceps PCC
7429]
gi|443017145|gb|ELS31656.1| Class I peptide chain release factor [Pseudanabaena biceps PCC
7429]
Length = 137
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
S +E+ IT RS G GGQ+VN VST + +RF +NA++ L+ K++L+ L+ R+ KD
Sbjct: 9 SLALDEISITAIRSQGAGGQNVNKVSTAIHLRFDINASS-LSPIYKERLLNLSDRRITKD 67
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
G +IIK+ + R+Q+ N DA+ L+ +I
Sbjct: 68 GIIIIKAQQHRTQEQNRDDALNRLQQLIQ 96
>gi|15963799|ref|NP_384152.1| peptidyl-tRNA hydrolase domain-containing protein [Sinorhizobium
meliloti 1021]
gi|334318078|ref|YP_004550697.1| class I peptide chain release factor [Sinorhizobium meliloti AK83]
gi|384531203|ref|YP_005715291.1| class I peptide chain release factor [Sinorhizobium meliloti
BL225C]
gi|384537921|ref|YP_005722006.1| peptide chain release factor protein (peptidyl- tRNA hydrolase
protein) [Sinorhizobium meliloti SM11]
gi|407722389|ref|YP_006842051.1| peptidyl-tRNA hydrolase domain-containing protein [Sinorhizobium
meliloti Rm41]
gi|418402739|ref|ZP_12976245.1| hypothetical protein SM0020_21547 [Sinorhizobium meliloti
CCNWSX0020]
gi|433611840|ref|YP_007188638.1| Protein chain release factor B [Sinorhizobium meliloti GR4]
gi|15072974|emb|CAC41433.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|333813379|gb|AEG06048.1| Class I peptide chain release factor [Sinorhizobium meliloti
BL225C]
gi|334097072|gb|AEG55083.1| Class I peptide chain release factor [Sinorhizobium meliloti AK83]
gi|336034813|gb|AEH80745.1| peptide chain release factor protein (peptidyl- tRNA hydrolase
protein) [Sinorhizobium meliloti SM11]
gi|359503316|gb|EHK75872.1| hypothetical protein SM0020_21547 [Sinorhizobium meliloti
CCNWSX0020]
gi|407320621|emb|CCM69225.1| peptidyl-tRNA hydrolase domain protein [Sinorhizobium meliloti
Rm41]
gi|429550030|gb|AGA05039.1| Protein chain release factor B [Sinorhizobium meliloti GR4]
Length = 144
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F V A+ L E VK ++L R +K+G L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFDVQASPSLPERVKANALKLAGRRASKEGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+++R RSQ+ N DA L+ +I KAA+
Sbjct: 78 EANRFRSQERNREDARERLKELILKAAE 105
>gi|398966414|ref|ZP_10681513.1| protein chain release factor B [Pseudomonas sp. GM30]
gi|398146115|gb|EJM34878.1| protein chain release factor B [Pseudomonas sp. GM30]
Length = 137
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEANRADALERLVELILSATK 100
>gi|110598161|ref|ZP_01386439.1| Class I peptide chain release factor [Chlorobium ferrooxidans DSM
13031]
gi|110340293|gb|EAT58790.1| Class I peptide chain release factor [Chlorobium ferrooxidans DSM
13031]
Length = 133
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 77 IPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNR 136
+ + + EEL++ RS G GGQ+VN V + V +RF + A++ L+++ K++L+ L R
Sbjct: 1 MQKITVREEELELHSMRSQGAGGQNVNKVESAVHLRFDIRASS-LSDEHKERLLALKDRR 59
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
++K+G LIIK+ R R+++ N DA+ L++++ AA
Sbjct: 60 VSKEGILIIKAQRYRTKEKNREDALQRLQSILESAA 95
>gi|158429096|pdb|2JVA|A Chain A, Nmr Solution Structure Of Peptidyl-Trna Hydrolase Domain
Protein From Pseudomonas Syringae Pv. Tomato. Northeast
Structural Genomics Consortium Target Psr211
Length = 108
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF +NA++ L K++L+ LN +R+ DG +++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDINASS-LPPFYKERLLALNDSRITSDGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAK 100
>gi|270264796|ref|ZP_06193060.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
gi|333928784|ref|YP_004502363.1| class I peptide chain release factor [Serratia sp. AS12]
gi|333933737|ref|YP_004507315.1| class I peptide chain release factor [Serratia plymuthica AS9]
gi|386330607|ref|YP_006026777.1| class I peptide chain release factor [Serratia sp. AS13]
gi|421785156|ref|ZP_16221589.1| peptide chain release factor RF2 [Serratia plymuthica A30]
gi|270041094|gb|EFA14194.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
gi|333475344|gb|AEF47054.1| Class I peptide chain release factor [Serratia plymuthica AS9]
gi|333492844|gb|AEF52006.1| Class I peptide chain release factor [Serratia sp. AS12]
gi|333962940|gb|AEG29713.1| Class I peptide chain release factor [Serratia sp. AS13]
gi|407752689|gb|EKF62839.1| peptide chain release factor RF2 [Serratia plymuthica A30]
Length = 137
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + DG +II
Sbjct: 14 ELELTAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLALNNHLITADGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+LN A+ L +I +A
Sbjct: 73 KAQEYRSQELNREAALARLVALIQQA 98
>gi|386823759|ref|ZP_10110901.1| hypothetical protein Q5A_06162 [Serratia plymuthica PRI-2C]
gi|386379299|gb|EIJ20094.1| hypothetical protein Q5A_06162 [Serratia plymuthica PRI-2C]
Length = 137
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + DG +II
Sbjct: 14 ELELTAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLALNNHLITADGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+LN A+ L +I +A
Sbjct: 73 KAQEYRSQELNREAALARLVALIQQA 98
>gi|398894935|ref|ZP_10646943.1| protein chain release factor B [Pseudomonas sp. GM55]
gi|398181678|gb|EJM69231.1| protein chain release factor B [Pseudomonas sp. GM55]
Length = 137
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALLRLTELILSATK 100
>gi|149910503|ref|ZP_01899143.1| hypothetical protein PE36_05133 [Moritella sp. PE36]
gi|149806463|gb|EDM66435.1| hypothetical protein PE36_05133 [Moritella sp. PE36]
Length = 137
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+DI R+ G GGQ+VN VST + +RF + A++ L E K++L+ LN +R+ KDG +II
Sbjct: 14 EIDIQAIRAQGAGGQNVNKVSTAIHLRFDIKASS-LPEFYKERLLALNDHRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
KS +RSQ N A L +I +A
Sbjct: 73 KSQESRSQDFNKQVAFERLIELIKQA 98
>gi|332307266|ref|YP_004435117.1| class I peptide chain release factor [Glaciecola sp. 4H-3-7+YE-5]
gi|410640492|ref|ZP_11351024.1| ribosome-associated protein [Glaciecola chathamensis S18K6]
gi|410648850|ref|ZP_11359247.1| ribosome-associated protein [Glaciecola agarilytica NO2]
gi|332174595|gb|AEE23849.1| Class I peptide chain release factor [Glaciecola sp. 4H-3-7+YE-5]
gi|410131612|dbj|GAC07646.1| ribosome-associated protein [Glaciecola agarilytica NO2]
gi|410140025|dbj|GAC09211.1| ribosome-associated protein [Glaciecola chathamensis S18K6]
Length = 137
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 81 SYIT---EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
SYI+ E+++T R+ G GGQ+VN VS+ + +RF + A++ L E K+QL++ N R+
Sbjct: 6 SYISLQDHEVELTAIRAQGAGGQNVNKVSSAIHLRFDIKASS-LPEFYKEQLLKSNDKRI 64
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG L++K+ R+Q++N DA+ L ++ AA
Sbjct: 65 TQDGILVLKAQAHRTQEMNRQDALERLGQIVRDAA 99
>gi|150398446|ref|YP_001328913.1| peptidyl-tRNA hydrolase domain-containing protein [Sinorhizobium
medicae WSM419]
gi|150029961|gb|ABR62078.1| Class I peptide chain release factor [Sinorhizobium medicae WSM419]
Length = 144
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F V A+ L E V+ ++L R++K+G L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFDVQASPSLPERVRANALKLAGRRVSKEGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+++R RSQ+ N DA L+ +I KAA+
Sbjct: 78 EANRFRSQERNREDARERLKELILKAAE 105
>gi|334344857|ref|YP_004553409.1| class I peptide chain release factor [Sphingobium chlorophenolicum
L-1]
gi|334101479|gb|AEG48903.1| Class I peptide chain release factor [Sphingobium chlorophenolicum
L-1]
Length = 141
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
T+EL T+ RS+G GGQHVN+ + V +RF V + L E VK +L + R+ +G L
Sbjct: 14 TDELSETFVRSTGAGGQHVNTTDSAVQLRFDVANSPSLPEAVKHRLAMIAGRRMTAEGVL 73
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKA 171
I++S+ +RSQ LN + + L +I +A
Sbjct: 74 ILRSEGSRSQLLNRQEVLARLVELIREA 101
>gi|28869023|ref|NP_791642.1| hypothetical protein PSPTO_1818 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|301384621|ref|ZP_07233039.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
tomato Max13]
gi|302059633|ref|ZP_07251174.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
tomato K40]
gi|302130732|ref|ZP_07256722.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|422658811|ref|ZP_16721242.1| hypothetical protein PLA106_15410 [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|28852263|gb|AAO55337.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|331017435|gb|EGH97491.1| hypothetical protein PLA106_15410 [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 137
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF +NA++ L K++L+ LN +R+ DG +++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDINASS-LPPFYKERLLALNDSRITSDGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAK 100
>gi|213968648|ref|ZP_03396790.1| hypothetical protein PSPTOT1_0956 [Pseudomonas syringae pv. tomato
T1]
gi|213926581|gb|EEB60134.1| hypothetical protein PSPTOT1_0956 [Pseudomonas syringae pv. tomato
T1]
Length = 154
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF +NA++ L K++L+ LN +R+ DG +++
Sbjct: 31 EIELTAIRAQGAGGQNVNKVSSAMHLRFDINASS-LPPFYKERLLALNDSRITSDGVIVL 89
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 90 KAQQYRTQEQNRADALLRLSELIVNAAK 117
>gi|398925288|ref|ZP_10661782.1| protein chain release factor B [Pseudomonas sp. GM48]
gi|426410817|ref|YP_007030916.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas sp. UW4]
gi|398172195|gb|EJM60069.1| protein chain release factor B [Pseudomonas sp. GM48]
gi|426269034|gb|AFY21111.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas sp. UW4]
Length = 137
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALLRLTELIQSATK 100
>gi|389878350|ref|YP_006371915.1| class I peptide chain release factor [Tistrella mobilis
KA081020-065]
gi|388529134|gb|AFK54331.1| class I peptide chain release factor [Tistrella mobilis
KA081020-065]
Length = 147
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNED-VKKQLIELNKNRLNKDGYLII 145
++ +Y +SGPGGQ+VN VST V +RF+V A ++ +D +++L+ L +R +G +++
Sbjct: 22 IEESYLLASGPGGQNVNKVSTAVRLRFRVAGARFVGDDETRRRLLALAGSRATAEGDIVL 81
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
+DR RS++ N DA LR MI +A P
Sbjct: 82 LADRFRSRERNREDARDRLRRMIAEARHRDP 112
>gi|398872875|ref|ZP_10628151.1| protein chain release factor B [Pseudomonas sp. GM74]
gi|398201401|gb|EJM88281.1| protein chain release factor B [Pseudomonas sp. GM74]
Length = 137
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITADGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALLRLTELIQSATK 100
>gi|344939815|ref|ZP_08779103.1| Class I peptide chain release factor [Methylobacter tundripaludum
SV96]
gi|344261007|gb|EGW21278.1| Class I peptide chain release factor [Methylobacter tundripaludum
SV96]
Length = 138
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++ R+ G GGQ+VN VS+ V +RF +NA++ L E K++L+ LN R++K+G +II
Sbjct: 14 EIEVHAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPEFYKEKLLALNDQRISKEGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N DA++ L+ +I A
Sbjct: 73 KAQQYRTQEKNKEDALSRLQALIQSVA 99
>gi|418531083|ref|ZP_13097002.1| class I peptide chain release factor [Comamonas testosteroni ATCC
11996]
gi|371451792|gb|EHN64825.1| class I peptide chain release factor [Comamonas testosteroni ATCC
11996]
Length = 136
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 86 ELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
E D+ +S RS GPGGQ+VN V++ V +RF V A+ L DV+++L+ L +R+ DG +
Sbjct: 11 EADVQWSAVRSQGPGGQNVNKVASAVHLRFDVRASR-LPADVQQRLLALGDSRITTDGVV 69
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMI 168
+IK+ + R+Q+ NL DA+ L ++
Sbjct: 70 VIKAQKYRTQEHNLWDALQRLNALV 94
>gi|90420571|ref|ZP_01228478.1| putative peptidyl-tRNA hydrolase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335299|gb|EAS49052.1| putative peptidyl-tRNA hydrolase [Aurantimonas manganoxydans
SI85-9A1]
Length = 144
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
++ R + +L + R+ GPGGQ+VN VST V +RF + L D ++L+ L
Sbjct: 8 IINERVTISGGDLQEQFIRAGGPGGQNVNKVSTAVQLRFAAAQSAALYPDTLRRLLRLAG 67
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
R KDG ++I++ R RSQ+ N DA L +I +A KP
Sbjct: 68 QRATKDGDVLIEASRFRSQERNREDARERLAALIREALKP 107
>gi|444311934|ref|ZP_21147533.1| hypothetical protein D584_19228 [Ochrobactrum intermedium M86]
gi|443484715|gb|ELT47518.1| hypothetical protein D584_19228 [Ochrobactrum intermedium M86]
Length = 145
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R + ++L+ ++ R+SGPGGQ+VN VST V +RF A + L ED+ +L +L
Sbjct: 10 ITNRLTIREDDLEESFIRASGPGGQNVNKVSTAVQLRFHA-ARSGLPEDILSRLFKLAGQ 68
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+ KDG ++I+++R R+Q+ N DA L +I KAA+
Sbjct: 69 KGTKDGDILIEANRFRTQERNREDARERLIALIAKAAE 106
>gi|239814848|ref|YP_002943758.1| peptidyl-tRNA hydrolase domain-containing protein [Variovorax
paradoxus S110]
gi|239801425|gb|ACS18492.1| Class I peptide chain release factor [Variovorax paradoxus S110]
Length = 135
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++ + R+ G GGQ+VN VS+ V +R+ ++A++ L DVK++++ L +R+ ++G +
Sbjct: 11 DEVEFSAIRAQGAGGQNVNKVSSAVHLRYDIHASS-LPADVKERMLALRDSRITQEGVFV 69
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
+K+ + R+Q++N ADA+ L+ ++ A P P++ T
Sbjct: 70 LKAQQHRTQEMNRADALARLQEVVDSVATP-PRVRRAT 106
>gi|323136424|ref|ZP_08071506.1| Class I peptide chain release factor [Methylocystis sp. ATCC 49242]
gi|322398498|gb|EFY01018.1| Class I peptide chain release factor [Methylocystis sp. ATCC 49242]
Length = 140
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 72 VIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
+ P + S +TEE + R+SGPGGQ+V V T V +RF + L E V+ +L
Sbjct: 4 ITPTIFLDDSELTEE----FLRASGPGGQNVQKVETAVRLRFDARRSPNLPEFVRLRLER 59
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L RL KDG ++I++ R R+Q+ N ADA+ L ++I +A
Sbjct: 60 LAGKRLTKDGVIVIEAQRYRTQERNRADALERLVDLIREA 99
>gi|385209995|ref|ZP_10036863.1| protein chain release factor B [Burkholderia sp. Ch1-1]
gi|385182333|gb|EIF31609.1| protein chain release factor B [Burkholderia sp. Ch1-1]
Length = 134
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+ + E+++T R+ G GGQ+VN VS+ + +RF V A++ L E +K +L+ L+ +RL
Sbjct: 4 RYPIPSNEIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASS-LPEVLKMRLLALSDHRLT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+DG +IIK+ R+Q++N A A+ L +I
Sbjct: 63 RDGVVIIKAQEHRTQEMNRAAALARLDELI 92
>gi|258597271|ref|XP_001347853.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254832637|gb|AAN35766.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 153
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%)
Query: 92 SRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTR 151
+RSSGPGGQ VN TKV IRF V+ A W+ +VK+ L ++ KN+L+K+ LII+S+ T
Sbjct: 24 ARSSGPGGQSVNKAETKVQIRFNVDDAKWIPLNVKENLKKIYKNKLSKNNDLIIESEETS 83
Query: 152 SQQLNLADAMTTLRNMIWKAAKPAPQISEDTI 183
SQ N L++++ +A +I I
Sbjct: 84 SQISNYKICADKLKHILEEAENYKEKIKHTCI 115
>gi|300776136|ref|ZP_07085995.1| class I peptide chain release factor [Chryseobacterium gleum ATCC
35910]
gi|300505269|gb|EFK36408.1| class I peptide chain release factor [Chryseobacterium gleum ATCC
35910]
Length = 130
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
++EL SRSSG GGQ+VN V T V + +KVNA+ + NED K + + KNR+N DG+
Sbjct: 4 FSKELSFKTSRSSGAGGQNVNKVETAVTVLWKVNASEFFNEDEKILIQDKLKNRINADGF 63
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L + +R+Q +N A+ + ++ KA
Sbjct: 64 LFLTVSESRTQLMNKNKAIEKITEIVNKA 92
>gi|414070446|ref|ZP_11406431.1| ribosome-associated protein [Pseudoalteromonas sp. Bsw20308]
gi|410807204|gb|EKS13185.1| ribosome-associated protein [Pseudoalteromonas sp. Bsw20308]
Length = 137
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T RS G GGQ+VN V++ + +RF +N + L + K++L+ L +R+ KDG LII
Sbjct: 14 ELELTAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPDFYKERLLALKDSRITKDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ R+Q+LN DA+ L+++I A
Sbjct: 73 KAQSHRTQELNRDDALKRLKDLILSA 98
>gi|402770784|ref|YP_006590321.1| class I peptide chain release factor [Methylocystis sp. SC2]
gi|401772804|emb|CCJ05670.1| Class I peptide chain release factor [Methylocystis sp. SC2]
Length = 141
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V R + E+ ++R+SGPGGQ+V V T V +RF + + L +DVK +L L
Sbjct: 4 VTDRIAIHEWEIVEEFARASGPGGQNVQKVETAVRLRFDIRNSPSLADDVKARLARLAGR 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
RL KDG ++I++ R R+Q+ N ADA+ L
Sbjct: 64 RLTKDGVILIEARRHRTQERNRADALLRL 92
>gi|332529476|ref|ZP_08405435.1| hypothetical protein HGR_06171 [Hylemonella gracilis ATCC 19624]
gi|332041122|gb|EGI77489.1| hypothetical protein HGR_06171 [Hylemonella gracilis ATCC 19624]
Length = 130
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ T R+ GPGGQ+VN VS+ V +RF + A++ L E VK +L+ R++KDG ++I
Sbjct: 7 EVEFTAVRAQGPGGQNVNKVSSAVHLRFDIRASS-LPEHVKDRLLAWPDQRVSKDGVVVI 65
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ R+Q+ N A+A L ++ +A+
Sbjct: 66 KAQTARTQEQNKAEAWARLAELVAQAS 92
>gi|294011513|ref|YP_003544973.1| protein chain release factor B [Sphingobium japonicum UT26S]
gi|292674843|dbj|BAI96361.1| protein chain release factor B [Sphingobium japonicum UT26S]
Length = 141
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S ++EL ++ RS+G GGQHVN+ + V +RF V + L E VK +L + R+
Sbjct: 10 ISIDSDELTESFVRSTGAGGQHVNTTDSAVQLRFDVANSPSLPEAVKHRLAVIAGRRMTA 69
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
DG LI++S+ +RSQ LN +A+ L +I +A
Sbjct: 70 DGVLILRSEGSRSQLLNRQEALDRLVELIREA 101
>gi|359456355|ref|ZP_09245530.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20495]
gi|358046612|dbj|GAA81779.1| ribosome-associated protein [Pseudoalteromonas sp. BSi20495]
Length = 137
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T RS G GGQ+VN V++ + +RF +N + L + K++L+ L +R+ KDG LII
Sbjct: 14 ELELTAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPDFYKERLLALKDSRITKDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ R+Q+LN DA+ L+++I A
Sbjct: 73 KAQSHRTQELNRDDALKRLKDLILSA 98
>gi|270313529|gb|ACZ73822.1| peptidyl-tRNA hydrolase domain protein [Ochrobactrum sp. T63]
Length = 145
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R + ++L+ ++ RSSGPGGQ+VN VST V +RF + + L EDV +L +L
Sbjct: 10 ITNRLTIHEDDLEESFIRSSGPGGQNVNKVSTAVQLRFHASQS-GLPEDVLSRLFKLAGQ 68
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+ KDG ++I+++R R+Q+ N DA + +I KAA+
Sbjct: 69 KGTKDGDILIEANRFRTQERNREDARERMIALIAKAAE 106
>gi|427739909|ref|YP_007059453.1| protein chain release factor B [Rivularia sp. PCC 7116]
gi|427374950|gb|AFY58906.1| protein chain release factor B [Rivularia sp. PCC 7116]
Length = 137
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V+IP E++I+ RS G GGQ+VN V+T + +RF +NA++ L + K +L++L
Sbjct: 7 VIIP-----DNEIEISAIRSQGAGGQNVNKVATAIHLRFDINASS-LPDYYKNRLLKLKD 60
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
NR+ +DG +IIK+ +RSQ N DA L+ +I A
Sbjct: 61 NRITQDGIIIIKAQESRSQLKNKEDAFARLKELIKSA 97
>gi|297184279|gb|ADI20397.1| protein chain release factor b [uncultured alpha proteobacterium
EB080_L27A02]
gi|297184328|gb|ADI20445.1| protein chain release factor b [uncultured alpha proteobacterium
EB080_L43F08]
Length = 148
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 85 EELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
EE +IT S RSSGPGGQHVN VS+ V++RF+ + L VK +L ++ + KDG
Sbjct: 20 EEWEITESFMRSSGPGGQHVNKVSSAVELRFEAERSPNLPPFVKARLRKIAGRKWTKDGA 79
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
LII +++ R Q LN A A+ L+ +I +A +
Sbjct: 80 LIITAEKHRLQPLNRALALKKLKTLIIEATE 110
>gi|428306185|ref|YP_007143010.1| class I peptide chain release factor [Crinalium epipsammum PCC
9333]
gi|428247720|gb|AFZ13500.1| Class I peptide chain release factor [Crinalium epipsammum PCC
9333]
Length = 138
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ RS G GGQ+VN VST + +RF + A++ L E +++L++LN R+ K+G ++I
Sbjct: 14 EINLSAVRSQGAGGQNVNKVSTAIHLRFDIMASS-LPERYQERLLKLNDQRITKEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA-AKPAP 176
K+ RSQ+ N +A+ L+++I A A P P
Sbjct: 73 KAQEHRSQEQNKEEALQRLQDLIKSAIAVPKP 104
>gi|227823905|ref|YP_002827878.1| peptidyl-tRNA hydrolase domain-containing protein [Sinorhizobium
fredii NGR234]
gi|227342907|gb|ACP27125.1| putative class I peptide chain release factor [Sinorhizobium fredii
NGR234]
Length = 144
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + A+ L + VK ++L R +KDG L+I
Sbjct: 18 ELAEQFVLAGGPGGQNVNKVSTAVQLFFNIQASPALPDRVKANALKLAGRRASKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++ R RSQ N DA LR +I KAA+
Sbjct: 78 EASRFRSQDRNREDARERLRELILKAAE 105
>gi|239833133|ref|ZP_04681462.1| peptidyl-tRNA hydrolase domain protein [Ochrobactrum intermedium
LMG 3301]
gi|239825400|gb|EEQ96968.1| peptidyl-tRNA hydrolase domain protein [Ochrobactrum intermedium
LMG 3301]
Length = 157
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R + ++L+ ++ R+SGPGGQ+VN VST V +RF A + L ED+ +L +L
Sbjct: 22 ITNRLTIREDDLEESFIRASGPGGQNVNKVSTAVQLRFHA-ARSGLPEDILSRLFKLAGQ 80
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+ KDG ++I+++R R+Q+ N DA L +I KAA+
Sbjct: 81 KGTKDGDILIEANRFRTQERNREDARERLIALIAKAAE 118
>gi|283780748|ref|YP_003371503.1| peptide chain release factor I [Pirellula staleyi DSM 6068]
gi|283439201|gb|ADB17643.1| Class I peptide chain release factor [Pirellula staleyi DSM 6068]
Length = 139
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL TYSR+ GPGGQ+VN VS+K + F V A+ + +DVK++ + K+RL +G ++I
Sbjct: 14 ELHFTYSRAGGPGGQNVNKVSSKATMHFDVTASPSIPDDVKQRFLTTFKSRLTTEGQVVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
S R Q N L+ M+ P
Sbjct: 74 HSQEHRDQPRNAEACEQKLKEMLLAVLTP 102
>gi|94264338|ref|ZP_01288130.1| Class I peptide chain release factor [delta proteobacterium MLMS-1]
gi|94266945|ref|ZP_01290597.1| Class I peptide chain release factor [delta proteobacterium MLMS-1]
gi|93452374|gb|EAT02996.1| Class I peptide chain release factor [delta proteobacterium MLMS-1]
gi|93455232|gb|EAT05445.1| Class I peptide chain release factor [delta proteobacterium MLMS-1]
Length = 142
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 72 VIPVVIP-RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLI 130
+IP++I S E+++ R+ GPGGQHVN +T + + F + A++ L E VK +L+
Sbjct: 3 LIPMLINNEISLPEAEIELRAMRAGGPGGQHVNKAATAIHLFFDIRASS-LPEQVKGRLL 61
Query: 131 ELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
LN R+ +G ++IK+ RSQ+ N +A LR++I A++
Sbjct: 62 TLNDRRITAEGTVVIKAVAHRSQEQNKEEARRRLRDLIIAASR 104
>gi|428300281|ref|YP_007138587.1| class I peptide chain release factor [Calothrix sp. PCC 6303]
gi|428236825|gb|AFZ02615.1| Class I peptide chain release factor [Calothrix sp. PCC 6303]
Length = 137
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
P S E++++ RS G GGQ+VN VST + +RF + ++ L + K+QL+ LN R+
Sbjct: 6 PTVSIPESEIELSAIRSQGAGGQNVNKVSTAIHLRFDIQVSS-LPDFYKEQLLMLNDRRI 64
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
NK+G ++IKS R+Q+ N +A+ L+ +I A
Sbjct: 65 NKEGVVVIKSQEHRTQEQNREEALQRLQELIKSVA 99
>gi|220924633|ref|YP_002499935.1| class I peptide chain release factor [Methylobacterium nodulans ORS
2060]
gi|219949240|gb|ACL59632.1| Class I peptide chain release factor [Methylobacterium nodulans ORS
2060]
Length = 141
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
P + EL+ ++ R+SGPGGQ+VN V+T V +RF V + L V +L++L
Sbjct: 5 CTPSITIDEAELEESFVRASGPGGQNVNKVATAVQLRFDVRRSPSLPNAVAIRLMKLAGR 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL DG L+I + R+Q+ N A+A L ++ +AA
Sbjct: 65 RLTADGILVITAQAHRTQERNRAEARERLAELVREAA 101
>gi|221066014|ref|ZP_03542119.1| Class I peptide chain release factor [Comamonas testosteroni KF-1]
gi|220711037|gb|EED66405.1| Class I peptide chain release factor [Comamonas testosteroni KF-1]
Length = 136
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 81 SYITEELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
++ E D+ +S RS GPGGQ+VN V++ V +RF V A+ L DV+++L+ L +R+
Sbjct: 6 TFELSEADVQWSAVRSQGPGGQNVNKVASAVHLRFDVRASR-LPPDVQQRLLALGDSRIT 64
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
DG ++IK+ + R+Q+ NL DA+ L ++
Sbjct: 65 TDGVVVIKAQKYRTQEHNLWDALQRLNALV 94
>gi|378952418|ref|YP_005209906.1| peptidyl-trna hydrolase domain protein [Pseudomonas fluorescens
F113]
gi|359762432|gb|AEV64511.1| peptidyl-trna hydrolase domain protein [Pseudomonas fluorescens
F113]
Length = 137
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A +
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSATQ 100
>gi|398903612|ref|ZP_10651773.1| protein chain release factor B [Pseudomonas sp. GM50]
gi|398945252|ref|ZP_10671673.1| protein chain release factor B [Pseudomonas sp. GM41(2012)]
gi|398157153|gb|EJM45555.1| protein chain release factor B [Pseudomonas sp. GM41(2012)]
gi|398176853|gb|EJM64555.1| protein chain release factor B [Pseudomonas sp. GM50]
Length = 137
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ +G LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEANRADALERLTELILSATK 100
>gi|66046808|ref|YP_236649.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
syringae pv. syringae B728a]
gi|257482794|ref|ZP_05636835.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|302188861|ref|ZP_07265534.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
syringae 642]
gi|416017758|ref|ZP_11564795.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|416025855|ref|ZP_11569503.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422406257|ref|ZP_16483289.1| hypothetical protein Pgy4_21221 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422598915|ref|ZP_16673168.1| hypothetical protein PLA107_29460 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422605558|ref|ZP_16677571.1| hypothetical protein PSYMO_10360 [Pseudomonas syringae pv. mori
str. 301020]
gi|422616888|ref|ZP_16685593.1| hypothetical protein PSYJA_06763 [Pseudomonas syringae pv. japonica
str. M301072]
gi|422630222|ref|ZP_16695421.1| hypothetical protein PSYPI_10893 [Pseudomonas syringae pv. pisi
str. 1704B]
gi|422641219|ref|ZP_16704643.1| hypothetical protein PSYCIT7_19971 [Pseudomonas syringae Cit 7]
gi|422646926|ref|ZP_16710057.1| hypothetical protein PMA4326_18148 [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|422674553|ref|ZP_16733905.1| hypothetical protein PSYAR_17450 [Pseudomonas syringae pv. aceris
str. M302273]
gi|422682981|ref|ZP_16741244.1| hypothetical protein PSYTB_22095 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|424068724|ref|ZP_17806173.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424073142|ref|ZP_17810561.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|440722466|ref|ZP_20902847.1| hypothetical protein A979_16593 [Pseudomonas syringae BRIP34876]
gi|440727558|ref|ZP_20907787.1| hypothetical protein A987_15837 [Pseudomonas syringae BRIP34881]
gi|440745227|ref|ZP_20924523.1| hypothetical protein A988_17487 [Pseudomonas syringae BRIP39023]
gi|443642979|ref|ZP_21126829.1| RF-1 (peptidyl-tRNA hydrolase) domain protein of unknown function
[Pseudomonas syringae pv. syringae B64]
gi|63257515|gb|AAY38611.1| Class I peptide chain release factor [Pseudomonas syringae pv.
syringae B728a]
gi|320323231|gb|EFW79319.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329738|gb|EFW85727.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330881436|gb|EGH15585.1| hypothetical protein Pgy4_21221 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330889213|gb|EGH21874.1| hypothetical protein PSYMO_10360 [Pseudomonas syringae pv. mori
str. 301020]
gi|330897273|gb|EGH28692.1| hypothetical protein PSYJA_06763 [Pseudomonas syringae pv. japonica
str. M301072]
gi|330939557|gb|EGH42878.1| hypothetical protein PSYPI_10893 [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330953607|gb|EGH53867.1| hypothetical protein PSYCIT7_19971 [Pseudomonas syringae Cit 7]
gi|330960471|gb|EGH60731.1| hypothetical protein PMA4326_18148 [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330972279|gb|EGH72345.1| hypothetical protein PSYAR_17450 [Pseudomonas syringae pv. aceris
str. M302273]
gi|330989185|gb|EGH87288.1| hypothetical protein PLA107_29460 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331012318|gb|EGH92374.1| hypothetical protein PSYTB_22095 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|407996488|gb|EKG36958.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|407996614|gb|EKG37078.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440361318|gb|ELP98550.1| hypothetical protein A979_16593 [Pseudomonas syringae BRIP34876]
gi|440363696|gb|ELQ00857.1| hypothetical protein A987_15837 [Pseudomonas syringae BRIP34881]
gi|440372903|gb|ELQ09681.1| hypothetical protein A988_17487 [Pseudomonas syringae BRIP39023]
gi|443282996|gb|ELS42001.1| RF-1 (peptidyl-tRNA hydrolase) domain protein of unknown function
[Pseudomonas syringae pv. syringae B64]
Length = 137
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF +NA++ L K++L+ L+ +R+ DG +++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPPFYKERLLALSDSRITSDGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAK 100
>gi|349688520|ref|ZP_08899662.1| hypothetical protein Gobo1_15082 [Gluconacetobacter oboediens
174Bp2]
Length = 135
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P +IP +EL +TY +SGPGGQ+VN V+T +RF + L+ +K +LI++
Sbjct: 3 PPIIP-----DDELHVTYILASGPGGQNVNKVATAAQLRFDARNSPTLSGRIKHRLIDVA 57
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+R+ +G +++ + R RSQ N DA+ L +MI +A+
Sbjct: 58 GSRMTGNGVIVLTARRFRSQIRNREDAVARLHDMIAQAS 96
>gi|209965006|ref|YP_002297921.1| peptidyl-tRNA hydrolase domain [Rhodospirillum centenum SW]
gi|209958472|gb|ACI99108.1| peptidyl-tRNA hydrolase domain, putative [Rhodospirillum centenum
SW]
Length = 139
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL ++ R+ GPGGQ+VN V T V +RF V A+ L + VK +L L
Sbjct: 4 ITPFIALDEAELQESFLRAGGPGGQNVNKVETAVQLRFDVAASPSLPDWVKAKLRTLAGR 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+ +G LII + + RSQ+ N DA L +I KA + P
Sbjct: 64 RMTDEGVLIITAQKYRSQERNREDARARLVELIAKATERQP 104
>gi|398919912|ref|ZP_10659006.1| protein chain release factor B [Pseudomonas sp. GM49]
gi|398169057|gb|EJM57052.1| protein chain release factor B [Pseudomonas sp. GM49]
Length = 137
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALLRLTELILSAIK 100
>gi|303248324|ref|ZP_07334585.1| Class I peptide chain release factor [Desulfovibrio fructosovorans
JJ]
gi|302490232|gb|EFL50146.1| Class I peptide chain release factor [Desulfovibrio fructosovorans
JJ]
Length = 143
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL T SRSSGPGGQHVN VS++V + F ++A+ L+ K++L +
Sbjct: 9 ITPGVAIPLSELTFTASRSSGPGGQHVNKVSSRVTLLFDLDASPSLSPAAKERLRAVLGG 68
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+ KDG L + S +RSQ N A+ ++ A P P
Sbjct: 69 RIGKDGVLQVSSQTSRSQTANKELAVERFVMLLRAALTPKP 109
>gi|398953751|ref|ZP_10675542.1| protein chain release factor B [Pseudomonas sp. GM33]
gi|398153450|gb|EJM41950.1| protein chain release factor B [Pseudomonas sp. GM33]
Length = 137
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALLRLTELIQSAIK 100
>gi|90578044|ref|ZP_01233855.1| hypothetical protein VAS14_13374 [Photobacterium angustum S14]
gi|90441130|gb|EAS66310.1| hypothetical protein VAS14_13374 [Photobacterium angustum S14]
Length = 137
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF +N ++ L + K++L++L+ +R+ KDG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAIHLRFDINRSS-LPDFYKERLLKLSDSRITKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
KS + R+Q++N +A+T L+ +I
Sbjct: 73 KSQQHRTQEMNREEALTRLKTLI 95
>gi|407769775|ref|ZP_11117149.1| hypothetical protein TH3_09825 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407287292|gb|EKF12774.1| hypothetical protein TH3_09825 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 138
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
Y+ E L + R+SGPGGQ+VN VST V +R +++ L + V+ +L EL +RL D
Sbjct: 9 YLDERHLQFQFVRASGPGGQNVNKVSTAVQMRVRIDDLTELPQRVRDRLRELAGSRLTND 68
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G +I + R R+Q+ N DA+ L ++ KAA+
Sbjct: 69 GEIIFDAQRYRTQERNKQDAIERLLALLRKAAE 101
>gi|372223202|ref|ZP_09501623.1| class I peptide chain release factor [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 135
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
+ I +EL+ RS GPGGQH N V+TKV++ F +N + L++ K +L E ++RL K+
Sbjct: 4 TIILKELEFRAVRSGGPGGQHANKVATKVELLFNINNSAGLSDLEKLRLKEQLQHRLTKE 63
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
G L ++S TRSQ N A+ L N++ + KP
Sbjct: 64 GVLSLQSSTTRSQHKNKELAIKRLWNILESSLKP 97
>gi|146276082|ref|YP_001166241.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodobacter
sphaeroides ATCC 17025]
gi|145554323|gb|ABP68936.1| Class I peptide chain release factor [Rhodobacter sphaeroides ATCC
17025]
Length = 141
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++SRSSGPGGQ+VN V T V++RF+ + L VK +L L R ++G ++I
Sbjct: 14 ELTESFSRSSGPGGQNVNKVETAVELRFEAERSPHLAPAVKARLKRLAGRRWTQEGAIVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+++ TRSQQ N A L ++ +AA AP+
Sbjct: 74 RAEETRSQQRNRELARERLVELV-RAALVAPK 104
>gi|418939450|ref|ZP_13492848.1| Class I peptide chain release factor [Rhizobium sp. PDO1-076]
gi|375053912|gb|EHS50309.1| Class I peptide chain release factor [Rhizobium sp. PDO1-076]
Length = 144
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + LN+ VK+ L RL+
Sbjct: 11 RITIAGWELAEQFVLAGGPGGQNVNKVSTAVQLFFNILGSPALNDRVKQNAAALAGRRLS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+G L+I+++R RSQ+ N DA L+ +I KAA+
Sbjct: 71 KEGVLMIEANRFRSQERNREDARERLKELILKAAE 105
>gi|114769606|ref|ZP_01447216.1| hypothetical protein OM2255_08566 [Rhodobacterales bacterium
HTCC2255]
gi|114549311|gb|EAU52193.1| hypothetical protein OM2255_08566 [alpha proteobacterium HTCC2255]
Length = 139
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 85 EELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
EE +IT S RSSGPGGQHVN VS+ V++RF+ + L VK +L ++ + KDG
Sbjct: 11 EEWEITESFMRSSGPGGQHVNKVSSAVELRFEAERSPNLPPFVKARLRKIAGRKWTKDGA 70
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
LII +++ R Q LN A A+ L+ +I +A +
Sbjct: 71 LIITAEKHRLQPLNRALALKKLKTLIIEATE 101
>gi|419140563|ref|ZP_13685322.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC6A]
gi|419157450|ref|ZP_13701981.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC6D]
gi|378000746|gb|EHV63812.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC6A]
gi|378015616|gb|EHV78510.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC6D]
Length = 127
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L MI
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAMI 95
>gi|157371995|ref|YP_001479984.1| peptidyl-tRNA hydrolase domain-containing protein [Serratia
proteamaculans 568]
gi|157323759|gb|ABV42856.1| Class I peptide chain release factor [Serratia proteamaculans 568]
Length = 137
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + DG +II
Sbjct: 14 EVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLALNNHLITADGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+LN A+ L +I +A
Sbjct: 73 KAQEYRSQELNREAALARLVTLIQQA 98
>gi|345872738|ref|ZP_08824667.1| Class I peptide chain release factor [Thiorhodococcus drewsii AZ1]
gi|343918059|gb|EGV28830.1| Class I peptide chain release factor [Thiorhodococcus drewsii AZ1]
Length = 165
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++RS GPGGQ+VN V T V +RF + L EDV+++L L R++ G + I
Sbjct: 39 ELSERFTRSPGPGGQNVNKVETAVQLRFDAAGSRALTEDVRQRLRRLAGRRIDSAGVITI 98
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R R+++ N DA L +I +A+
Sbjct: 99 EAHRFRTRERNREDARERLAQLIRQAS 125
>gi|187923609|ref|YP_001895251.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187714803|gb|ACD16027.1| Class I peptide chain release factor [Burkholderia phytofirmans
PsJN]
Length = 134
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF V A++ L E +K +L+ L+ +RL +DG +II
Sbjct: 11 EIELTAVRAQGAGGQNVNKVSSAIHLRFDVQASS-LPEVLKMRLLALSDHRLTRDGVVII 69
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q++N A A+ L +I
Sbjct: 70 KAQEHRTQEMNRAAALARLDELI 92
>gi|92118633|ref|YP_578362.1| peptidyl-tRNA hydrolase domain-containing protein [Nitrobacter
hamburgensis X14]
gi|91801527|gb|ABE63902.1| Class I peptide chain release factor [Nitrobacter hamburgensis X14]
Length = 139
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++I++ R+SGPGGQ+VN +ST +RF L DV +L L RL KDG ++I
Sbjct: 14 DIEISFIRASGPGGQNVNKLSTAAQLRFDTRRLT-LAPDVAVRLARLAGQRLTKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
+ R R+Q+ N ADA L ++ +AA +P P+
Sbjct: 73 HAQRFRTQERNRADATDRLIELLREAAIRPTPR 105
>gi|91782974|ref|YP_558180.1| peptidyl-tRNA hydrolase domain protein [Burkholderia xenovorans
LB400]
gi|91686928|gb|ABE30128.1| Class I peptide chain release factor [Burkholderia xenovorans
LB400]
Length = 134
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF V A++ L E +K +L+ L+ +RL +DG +II
Sbjct: 11 EIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASS-LPEVLKMRLLALSDHRLTRDGVVII 69
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q++N A A+ L +I
Sbjct: 70 KAQEHRTQEMNRAAALARLDELI 92
>gi|390169253|ref|ZP_10221194.1| hypothetical protein SIDU_17228 [Sphingobium indicum B90A]
gi|389588116|gb|EIM66170.1| hypothetical protein SIDU_17228 [Sphingobium indicum B90A]
Length = 141
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S ++EL ++ RS+G GGQHVN+ + V +RF V + L E +K +L + R+
Sbjct: 10 ISIDSDELTESFVRSTGAGGQHVNTTDSAVQLRFDVANSPSLPEAIKHRLAVIAGRRMTA 69
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
DG LI++S+ +RSQ LN +A+ L +I +A
Sbjct: 70 DGVLILRSEGSRSQLLNRQEALDRLVELIREA 101
>gi|392554568|ref|ZP_10301705.1| hypothetical protein PundN2_04028 [Pseudoalteromonas undina NCIMB
2128]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ RS G GGQ+VN V++ + +RF +N + L E K++L+ L +R+ K+G LII
Sbjct: 14 EVELSAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPEFYKERLLALKDSRITKEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q+LN DA+ L+++I A K
Sbjct: 73 KAQSHRTQELNREDALKRLKDLILSATK 100
>gi|237799083|ref|ZP_04587544.1| hypothetical protein POR16_09642 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021937|gb|EGI01994.1| hypothetical protein POR16_09642 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF +NA++ L K++L+ L+ +R+ DG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDINASS-LPPFYKERLLALSDSRITSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAK 100
>gi|162450616|ref|YP_001612983.1| peptide chain release factor [Sorangium cellulosum So ce56]
gi|161161198|emb|CAN92503.1| Peptide chain release factor [Sorangium cellulosum So ce56]
Length = 143
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIK 146
L + R+SGPGGQ+VN V++KV++RF A L +D K +L L + RL+ +G L I
Sbjct: 18 LSWSAVRASGPGGQNVNKVASKVELRFDFGAWPELADDAKARLRVLARGRLDAEGRLFIV 77
Query: 147 SDRTRSQQLNLADAMTTLRNMIWKA 171
S TR Q NL DA LR +I +A
Sbjct: 78 SQLTRDQLRNLDDAREKLRALILRA 102
>gi|336315116|ref|ZP_08570028.1| protein chain release factor B [Rheinheimera sp. A13L]
gi|335880527|gb|EGM78414.1| protein chain release factor B [Rheinheimera sp. A13L]
Length = 142
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL+ ++ R+ G GGQHVN VST V +RF + ++ L ++ K++L++ +R++K G ++
Sbjct: 16 DELEFSFIRAQGSGGQHVNKVSTAVQLRFDIERSS-LPDEFKQKLLQYPDDRISKSGVIV 74
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPA 175
IK+ RSQ +N DA+ L ++ A+ A
Sbjct: 75 IKAQAHRSQDMNKEDAVAKLMQLLQSASFEA 105
>gi|325273397|ref|ZP_08139654.1| hypothetical protein G1E_10188 [Pseudomonas sp. TJI-51]
gi|324101470|gb|EGB99059.1| hypothetical protein G1E_10188 [Pseudomonas sp. TJI-51]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++++Y R+ G GGQ+VN VS+ V +RF + A++ L K++L+ L +R+ DG LII
Sbjct: 14 DIELSYIRAQGAGGQNVNKVSSAVHLRFDIRASS-LPAFYKERLLALRDSRITGDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQFRTQEQNRADALARLAELIIAAGK 100
>gi|441496071|ref|ZP_20978306.1| Hypothetical protein C900_04165 [Fulvivirga imtechensis AK7]
gi|441440030|gb|ELR73313.1| Hypothetical protein C900_04165 [Fulvivirga imtechensis AK7]
Length = 136
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
+ EL+ T SRSSGPGGQHVN V+TKV +RF ++ + L+ + K + E N++ D +
Sbjct: 11 FSSELNFTTSRSSGPGGQHVNKVNTKVTLRFDIDHSEMLSAEEKAVIKEKLSNKVTNDNF 70
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L+I ++ RSQ N +++ +++ +A
Sbjct: 71 LVISAESERSQLKNKEESIKKFLDLLKQA 99
>gi|398855595|ref|ZP_10612077.1| protein chain release factor B [Pseudomonas sp. GM80]
gi|398988890|ref|ZP_10692534.1| protein chain release factor B [Pseudomonas sp. GM24]
gi|399016728|ref|ZP_10718941.1| protein chain release factor B [Pseudomonas sp. GM16]
gi|398104998|gb|EJL95121.1| protein chain release factor B [Pseudomonas sp. GM16]
gi|398148690|gb|EJM37359.1| protein chain release factor B [Pseudomonas sp. GM24]
gi|398230645|gb|EJN16660.1| protein chain release factor B [Pseudomonas sp. GM80]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEANRADALERLVELILSATK 100
>gi|407365708|ref|ZP_11112240.1| hypothetical protein PmanJ_18028 [Pseudomonas mandelii JR-1]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A++ L E K++L+ L +R+ DG LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDIPASS-LPEFYKERLLALRDSRITSDGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEANRADALERLVELILSATK 100
>gi|388547814|ref|ZP_10151074.1| hypothetical protein PMM47T1_25628 [Pseudomonas sp. M47T1]
gi|388274103|gb|EIK93705.1| hypothetical protein PMM47T1_25628 [Pseudomonas sp. M47T1]
Length = 137
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ R+ G GGQ+VN VS+ V +RF +NA++ L K++L+ L +R+ DG ++I
Sbjct: 14 EVELSAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPPFYKERLLALRDSRITSDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ LR +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLRELIVNAVK 100
>gi|440682292|ref|YP_007157087.1| Class I peptide chain release factor [Anabaena cylindrica PCC 7122]
gi|428679411|gb|AFZ58177.1| Class I peptide chain release factor [Anabaena cylindrica PCC 7122]
Length = 137
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ I+ RS G GGQ+VN V+T + +RF +NA++ L+ K++L+ L R+ KDG +II
Sbjct: 14 EISISAIRSQGAGGQNVNKVATAIHLRFDINASS-LSPLYKERLLNLGDQRITKDGIIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
K+ + R+Q+ N DA+ L+ +I AP+
Sbjct: 73 KAQQHRTQEQNKEDALKRLQTLIKSVTVIAPK 104
>gi|399001600|ref|ZP_10704312.1| protein chain release factor B [Pseudomonas sp. GM18]
gi|398127151|gb|EJM16565.1| protein chain release factor B [Pseudomonas sp. GM18]
Length = 137
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ +G LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSATK 100
>gi|209521958|ref|ZP_03270624.1| Class I peptide chain release factor [Burkholderia sp. H160]
gi|209497613|gb|EDZ97802.1| Class I peptide chain release factor [Burkholderia sp. H160]
Length = 134
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+S E+++T R+ G GGQ+VN VS+ + +RF V A++ L + +K +L+ L+ +RL
Sbjct: 4 RYSIPPNEIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASS-LPDVLKMRLLALSDHRLT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+DG +IIK+ R+Q++N A A+ L +I
Sbjct: 63 RDGVVIIKAQEHRTQEMNRAAALARLDELI 92
>gi|148547661|ref|YP_001267763.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
putida F1]
gi|148511719|gb|ABQ78579.1| Class I peptide chain release factor [Pseudomonas putida F1]
Length = 137
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + +++ L E K +L+ L+ +R+ G LII
Sbjct: 14 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPSSS-LPEFYKARLLALHDSRITGAGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K + R+Q+ N ADA+ L +I A K
Sbjct: 73 KGQQYRTQEQNRADALARLAELIITAGK 100
>gi|417616533|ref|ZP_12266972.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli G58-1]
gi|345383667|gb|EGX13540.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli G58-1]
Length = 147
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L MI
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAMI 95
>gi|16128184|ref|NP_414733.1| petidyl-tRNA hydrolase, ribosome-attached; stalled ribosome rescue
factor [Escherichia coli str. K-12 substr. MG1655]
gi|170079828|ref|YP_001729148.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
str. K-12 substr. DH10B]
gi|238899590|ref|YP_002925386.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
BW2952]
gi|300949774|ref|ZP_07163749.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 116-1]
gi|300956077|ref|ZP_07168401.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 175-1]
gi|301028687|ref|ZP_07191907.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 196-1]
gi|301646517|ref|ZP_07246391.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 146-1]
gi|331640646|ref|ZP_08341794.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
gi|386279235|ref|ZP_10056923.1| hypothetical protein ESBG_04024 [Escherichia sp. 4_1_40B]
gi|386596916|ref|YP_006093316.1| class I peptide chain release factor [Escherichia coli DH1]
gi|386612356|ref|YP_006132022.1| hypothetical protein UMNK88_197 [Escherichia coli UMNK88]
gi|387619959|ref|YP_006127586.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
DH1]
gi|388476310|ref|YP_488494.1| hypothetical protein Y75_p0188 [Escherichia coli str. K-12 substr.
W3110]
gi|415777448|ref|ZP_11488677.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3431]
gi|417260409|ref|ZP_12047907.1| RF-1 domain protein [Escherichia coli 2.3916]
gi|417273581|ref|ZP_12060926.1| RF-1 domain protein [Escherichia coli 2.4168]
gi|417279634|ref|ZP_12066940.1| RF-1 domain protein [Escherichia coli 3.2303]
gi|417292983|ref|ZP_12080263.1| RF-1 domain protein [Escherichia coli B41]
gi|417611204|ref|ZP_12261680.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_EH250]
gi|417632673|ref|ZP_12282896.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_S1191]
gi|417944163|ref|ZP_12587407.1| hypothetical protein IAE_04170 [Escherichia coli XH140A]
gi|417975898|ref|ZP_12616694.1| hypothetical protein IAM_06218 [Escherichia coli XH001]
gi|418301081|ref|ZP_12912875.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli UMNF18]
gi|418959642|ref|ZP_13511540.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli J53]
gi|419152035|ref|ZP_13696627.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC6C]
gi|419162457|ref|ZP_13706938.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC6E]
gi|419173453|ref|ZP_13717315.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7B]
gi|419812904|ref|ZP_14337764.1| hypothetical protein UWO_20422 [Escherichia coli O32:H37 str. P4]
gi|419937834|ref|ZP_14454680.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 75]
gi|422772885|ref|ZP_16826571.1| RF-1 domain-containing protein [Escherichia coli E482]
gi|422816208|ref|ZP_16864423.1| hypothetical protein ESMG_00735 [Escherichia coli M919]
gi|423700974|ref|ZP_17675433.1| hypothetical protein ESSG_00505 [Escherichia coli H730]
gi|425118265|ref|ZP_18520019.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 8.0569]
gi|425270902|ref|ZP_18662427.1| aminoacyl-tRNA hydrolase [Escherichia coli TW15901]
gi|425281525|ref|ZP_18672656.1| aminoacyl-tRNA hydrolase [Escherichia coli TW00353]
gi|432415144|ref|ZP_19657779.1| ribosome-associated protein [Escherichia coli KTE44]
gi|432562113|ref|ZP_19798746.1| ribosome-associated protein [Escherichia coli KTE51]
gi|432578905|ref|ZP_19815341.1| ribosome-associated protein [Escherichia coli KTE56]
gi|432625751|ref|ZP_19861740.1| ribosome-associated protein [Escherichia coli KTE77]
gi|432635511|ref|ZP_19871401.1| ribosome-associated protein [Escherichia coli KTE81]
gi|432659459|ref|ZP_19895124.1| ribosome-associated protein [Escherichia coli KTE111]
gi|432684072|ref|ZP_19919395.1| ribosome-associated protein [Escherichia coli KTE156]
gi|432689976|ref|ZP_19925230.1| ribosome-associated protein [Escherichia coli KTE161]
gi|432702735|ref|ZP_19937867.1| ribosome-associated protein [Escherichia coli KTE171]
gi|432735656|ref|ZP_19970448.1| ribosome-associated protein [Escherichia coli KTE42]
gi|432879448|ref|ZP_20096475.1| ribosome-associated protein [Escherichia coli KTE154]
gi|432952849|ref|ZP_20145592.1| ribosome-associated protein [Escherichia coli KTE197]
gi|442590817|ref|ZP_21009572.1| Hypothetical protein YaeJ with similarity to translation release
factor [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|450238460|ref|ZP_21898888.1| hypothetical protein C201_00895 [Escherichia coli S17]
gi|1175507|sp|P40711.2|ARFB_ECOLI RecName: Full=Peptidyl-tRNA hydrolase YaeJ; Short=PTH; AltName:
Full=Alternative ribosome-rescue factor B
gi|381353213|pdb|4DH9|Y Chain Y, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|845336|gb|AAA82971.1| orf 140; significant similarity to ORF next to beta-keto adipate
succinyl CoA transferase from P. putida [Escherichia
coli]
gi|1552767|gb|AAB08619.1| hypothetical [Escherichia coli]
gi|1785845|dbj|BAA08432.1| YaeJ [Escherichia coli W3110]
gi|1786389|gb|AAC73302.1| alternative stalled-ribosome rescue factor B; peptidyl-tRNA
hydrolase, ribosome-attached [Escherichia coli str. K-12
substr. MG1655]
gi|85674377|dbj|BAA77867.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|169887663|gb|ACB01370.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|238860430|gb|ACR62428.1| conserved protein [Escherichia coli BW2952]
gi|260450605|gb|ACX41027.1| Class I peptide chain release factor [Escherichia coli DH1]
gi|299878286|gb|EFI86497.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 196-1]
gi|300317071|gb|EFJ66855.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 175-1]
gi|300450839|gb|EFK14459.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 116-1]
gi|301075270|gb|EFK90076.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 146-1]
gi|315134882|dbj|BAJ42041.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli DH1]
gi|315616323|gb|EFU96941.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3431]
gi|323939932|gb|EGB36130.1| RF-1 domain-containing protein [Escherichia coli E482]
gi|331040392|gb|EGI12599.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
gi|332341525|gb|AEE54859.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|339413179|gb|AEJ54851.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli UMNF18]
gi|342363991|gb|EGU28094.1| hypothetical protein IAE_04170 [Escherichia coli XH140A]
gi|344194296|gb|EGV48370.1| hypothetical protein IAM_06218 [Escherichia coli XH001]
gi|345367178|gb|EGW99265.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_EH250]
gi|345391470|gb|EGX21260.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_S1191]
gi|359331050|dbj|BAL37497.1| conserved protein [Escherichia coli str. K-12 substr. MDS42]
gi|378004159|gb|EHV67188.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC6C]
gi|378017605|gb|EHV80477.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC6E]
gi|378038944|gb|EHW01449.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7B]
gi|384377863|gb|EIE35756.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli J53]
gi|385154203|gb|EIF16219.1| hypothetical protein UWO_20422 [Escherichia coli O32:H37 str. P4]
gi|385540607|gb|EIF87428.1| hypothetical protein ESMG_00735 [Escherichia coli M919]
gi|385713674|gb|EIG50605.1| hypothetical protein ESSG_00505 [Escherichia coli H730]
gi|386123824|gb|EIG72413.1| hypothetical protein ESBG_04024 [Escherichia sp. 4_1_40B]
gi|386225567|gb|EII47892.1| RF-1 domain protein [Escherichia coli 2.3916]
gi|386233763|gb|EII65743.1| RF-1 domain protein [Escherichia coli 2.4168]
gi|386237733|gb|EII74677.1| RF-1 domain protein [Escherichia coli 3.2303]
gi|386252555|gb|EIJ02246.1| RF-1 domain protein [Escherichia coli B41]
gi|388411373|gb|EIL71554.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 75]
gi|408200433|gb|EKI25614.1| aminoacyl-tRNA hydrolase [Escherichia coli TW15901]
gi|408206748|gb|EKI31520.1| aminoacyl-tRNA hydrolase [Escherichia coli TW00353]
gi|408574481|gb|EKK50251.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 8.0569]
gi|430944569|gb|ELC64662.1| ribosome-associated protein [Escherichia coli KTE44]
gi|431101076|gb|ELE06045.1| ribosome-associated protein [Escherichia coli KTE51]
gi|431109861|gb|ELE13811.1| ribosome-associated protein [Escherichia coli KTE56]
gi|431166103|gb|ELE66430.1| ribosome-associated protein [Escherichia coli KTE77]
gi|431174777|gb|ELE74813.1| ribosome-associated protein [Escherichia coli KTE81]
gi|431204281|gb|ELF02854.1| ribosome-associated protein [Escherichia coli KTE111]
gi|431225990|gb|ELF23176.1| ribosome-associated protein [Escherichia coli KTE156]
gi|431232649|gb|ELF28315.1| ribosome-associated protein [Escherichia coli KTE161]
gi|431248136|gb|ELF42345.1| ribosome-associated protein [Escherichia coli KTE171]
gi|431287927|gb|ELF78713.1| ribosome-associated protein [Escherichia coli KTE42]
gi|431415246|gb|ELG97796.1| ribosome-associated protein [Escherichia coli KTE154]
gi|431472574|gb|ELH52462.1| ribosome-associated protein [Escherichia coli KTE197]
gi|441608821|emb|CCP95485.1| Hypothetical protein YaeJ with similarity to translation release
factor [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|449325775|gb|EMD15677.1| hypothetical protein C201_00895 [Escherichia coli S17]
Length = 140
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L MI
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAMI 95
>gi|405376959|ref|ZP_11030908.1| protein chain release factor B [Rhizobium sp. CF142]
gi|397326512|gb|EJJ30828.1| protein chain release factor B [Rhizobium sp. CF142]
Length = 145
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LNE VK I+L R++KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIPNSPSLNERVKANAIKLAGRRMSKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARERLKELILEAA 104
>gi|358451185|ref|ZP_09161619.1| class I peptide chain release factor [Marinobacter manganoxydans
MnI7-9]
gi|357224418|gb|EHJ02949.1| class I peptide chain release factor [Marinobacter manganoxydans
MnI7-9]
Length = 137
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++IT R+ G GGQ+VN V++ V +RF + ++ L K++L+ LN R++K+G LII
Sbjct: 14 EIEITQIRAQGAGGQNVNKVASAVHLRFDIPHSS-LPPFYKERLMSLNDQRISKEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ R+ +LN DA+ L+ +I +A KP
Sbjct: 73 KAQSFRTLELNKEDALERLKELIQEAVKP 101
>gi|410626312|ref|ZP_11337075.1| ribosome-associated protein [Glaciecola mesophila KMM 241]
gi|410154132|dbj|GAC23844.1| ribosome-associated protein [Glaciecola mesophila KMM 241]
Length = 137
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 81 SYIT---EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
SYI+ E+++T R+ G GGQ+VN VS+ + +RF + A++ L E K+QL+ N R+
Sbjct: 6 SYISLQDHEVELTAIRAQGAGGQNVNKVSSAIHLRFDIKASS-LPEFYKEQLLNSNDKRI 64
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG L++K+ R+Q++N DA+ L ++ AA
Sbjct: 65 TQDGILVLKAQAHRTQEMNRQDALERLAAIVRDAA 99
>gi|293394733|ref|ZP_06639025.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
gi|291422859|gb|EFE96096.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
Length = 137
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + DG +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLALNHHLITGDGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+LN A+ L +I +A
Sbjct: 73 KAQEYRSQELNREAALARLVALIRQA 98
>gi|221056078|ref|XP_002259177.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809248|emb|CAQ39950.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 153
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 92 SRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTR 151
+RSSGPGGQ VN +KV +RF V+ A W+ VK L +++KN+LNK+ LII+ + T
Sbjct: 24 ARSSGPGGQSVNKAESKVQLRFNVDTAKWIPSTVKDNLKKIHKNKLNKNNELIIECEETP 83
Query: 152 SQQLNLADAMTTLRNMIWKA 171
SQ N LR ++ +A
Sbjct: 84 SQISNYKICTDKLRALLEEA 103
>gi|71733973|ref|YP_275683.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|71554526|gb|AAZ33737.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 154
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF +NA++ L K++L+ L+ +R+ DG +++
Sbjct: 31 EIELTAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPPFYKERLLALSDSRITSDGVIVL 89
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 90 KAQQYRTQEQNRADALLRLSELIVNAAK 117
>gi|395449614|ref|YP_006389867.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
putida ND6]
gi|388563611|gb|AFK72752.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
putida ND6]
Length = 145
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++TY R+ G GGQ+VN VS+ V +RF + +++ L E K +L+ L+ +R+ G LII
Sbjct: 22 EIELTYIRAQGAGGQNVNKVSSAVHLRFDIPSSS-LPEFYKARLLALHDSRITGAGVLII 80
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K + R+Q+ N ADA+ L +I A K
Sbjct: 81 KGQQYRTQEQNRADALARLAELIITAGK 108
>gi|329895452|ref|ZP_08271033.1| Hypothetical protein IMCC3088_1493 [gamma proteobacterium IMCC3088]
gi|328922335|gb|EGG29681.1| Hypothetical protein IMCC3088_1493 [gamma proteobacterium IMCC3088]
Length = 140
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+D R+ G GGQ+VN VS+ + + F ++ ++ L E K+ L++L+ R+ KDG ++I
Sbjct: 17 EIDYHAIRAQGAGGQNVNKVSSAIHLTFDIHQSS-LPEPYKQGLLKLSDQRITKDGVVVI 75
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ R R+Q+ N DA+ LR +I KA
Sbjct: 76 KAQRHRTQEQNKEDALARLRQLILKAG 102
>gi|32477793|ref|NP_870787.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula baltica SH
1]
gi|417305584|ref|ZP_12092540.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula baltica
WH47]
gi|421612637|ref|ZP_16053739.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula baltica
SH28]
gi|440713145|ref|ZP_20893749.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula baltica
SWK14]
gi|32448350|emb|CAD77864.1| conserved hypothetical protein-putative protein chain release
factor B [Rhodopirellula baltica SH 1]
gi|327538111|gb|EGF24799.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula baltica
WH47]
gi|408496590|gb|EKK01147.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula baltica
SH28]
gi|436442077|gb|ELP35255.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula baltica
SWK14]
Length = 142
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V RF +L+ + SRS GPGGQ+VN V++KV +R+K +E K+ +
Sbjct: 6 VTSRFVISEADLNWSASRSGGPGGQNVNKVNSKVTLRWKPQPQTGFDEFWCKRFVTQFGT 65
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+NK+G +++ S+ TR Q NLADA L +M+
Sbjct: 66 RINKEGEMVLHSEATRDQSRNLADARERLVSML 98
>gi|424889293|ref|ZP_18312896.1| protein chain release factor B [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174842|gb|EJC74886.1| protein chain release factor B [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 147
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LNE VK ++L RL+KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIPNSPSLNERVKANAVKLAGRRLSKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARDRLKELILEAA 104
>gi|301061605|ref|ZP_07202363.1| peptidyl-tRNA hydrolase domain protein [delta proteobacterium
NaphS2]
gi|300444298|gb|EFK08305.1| peptidyl-tRNA hydrolase domain protein [delta proteobacterium
NaphS2]
Length = 143
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R S E+D+ RS G GGQ+VN V+T V +RF +NA++ L + +K++L++L R+
Sbjct: 7 RISIPLNEIDLHAIRSQGAGGQNVNKVATAVHLRFDINASS-LPDFIKERLLKLTDQRIT 65
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
K+G +++K+ + R+Q N A+A+ LR+++
Sbjct: 66 KEGVIVLKAQQYRTQGKNRAEALFRLRDLV 95
>gi|449133510|ref|ZP_21769061.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula europaea 6C]
gi|448887792|gb|EMB18149.1| peptidyl-tRNA hydrolase domain protein [Rhodopirellula europaea 6C]
Length = 142
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V RF +L+ + SRS GPGGQ+VN V++KV +R+K +E K+ +
Sbjct: 6 VTSRFVIPEADLNWSASRSGGPGGQNVNKVNSKVTLRWKPQPQTGFDEFWCKRFVTQFGT 65
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+NK+G +++ S+ TR Q NLADA L +M+
Sbjct: 66 RINKEGEMVLHSEATRDQSRNLADARERLVSML 98
>gi|389691020|ref|ZP_10179913.1| protein chain release factor B [Microvirga sp. WSM3557]
gi|388589263|gb|EIM29552.1| protein chain release factor B [Microvirga sp. WSM3557]
Length = 140
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN V T V +RF V + L + VK++L L RL +G LII
Sbjct: 14 ELQESFIRASGPGGQNVNKVETAVQLRFDVRNSPSLPDYVKEKLERLAGKRLTNEGVLII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+ R R+Q+ N DA+ L +I +A +
Sbjct: 74 TAQRFRTQERNREDAVERLVELIRQATE 101
>gi|308274602|emb|CBX31201.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [uncultured
Desulfobacterium sp.]
Length = 147
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ + S E+ + ++SGPGGQ+VN V++ V +RF V ++ L +DV+K+L +++
Sbjct: 10 ITDKISIQDHEIKEEFIQASGPGGQNVNKVASAVQLRFDVKNSSSLPDDVRKRLFQISGK 69
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
R++ +G LII + R R Q N DA L +I KAA+
Sbjct: 70 RISSEGILIINARRYRDQIKNRKDAADRLVELIQKAAE 107
>gi|88703425|ref|ZP_01101141.1| peptidyl-tRNA hydrolase [Congregibacter litoralis KT71]
gi|88702139|gb|EAQ99242.1| peptidyl-tRNA hydrolase [Congregibacter litoralis KT71]
Length = 144
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V P FS +++ + R+SG GGQ+VN VST V +RF +N A + E V+++L+ +
Sbjct: 10 VTPDFSLHHDDVQMDAVRASGAGGQNVNKVSTAVHLRFDINRA-RIPERVRQKLLRSRDS 68
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
R++ DG L++K+ R R+Q N DA+ L ++ +A+
Sbjct: 69 RISDDGVLVLKAQRFRTQGKNREDAIERLVELLREAS 105
>gi|418060447|ref|ZP_12698358.1| Class I peptide chain release factor, partial [Methylobacterium
extorquens DSM 13060]
gi|373565979|gb|EHP91997.1| Class I peptide chain release factor, partial [Methylobacterium
extorquens DSM 13060]
Length = 106
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
P+ EL+ + R+SGPGGQ+VN +ST V +RF V + L + V +L+ L
Sbjct: 5 CTPQIEIDEAELEEAFVRASGPGGQNVNKLSTAVQLRFDVRRSRSLPDAVAVRLMRLAGR 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADA 160
RL +G L+I + R R+Q+ N ADA
Sbjct: 65 RLTGEGVLVINAQRFRTQERNRADA 89
>gi|295676245|ref|YP_003604769.1| class I peptide chain release factor [Burkholderia sp. CCGE1002]
gi|295436088|gb|ADG15258.1| Class I peptide chain release factor [Burkholderia sp. CCGE1002]
Length = 134
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF V A++ L E +K +L+ L+ +RL +DG ++I
Sbjct: 11 EIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASS-LPEVLKMRLLALSDHRLTRDGVVVI 69
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q++N A A+ L +I
Sbjct: 70 KAQEHRTQEMNRAAALARLDELI 92
>gi|374578022|ref|ZP_09651118.1| protein chain release factor B [Bradyrhizobium sp. WSM471]
gi|374426343|gb|EHR05876.1| protein chain release factor B [Bradyrhizobium sp. WSM471]
Length = 140
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I + R+SGPGGQ+VN V+T +RF L ED +L L R+ KDG ++
Sbjct: 13 DDIEIGFVRASGPGGQNVNKVATSAQLRFDTRKLT-LPEDAALRLARLAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I++ R R+Q+ N DA+ L M+ +A +P P+
Sbjct: 72 IQAQRFRTQERNRQDAIDRLTEMLGEAMIRPKPR 105
>gi|386398424|ref|ZP_10083202.1| protein chain release factor B [Bradyrhizobium sp. WSM1253]
gi|385739050|gb|EIG59246.1| protein chain release factor B [Bradyrhizobium sp. WSM1253]
Length = 138
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I + R+SGPGGQ+VN V+T +RF L ED +L L R+ KDG ++
Sbjct: 13 DDIEIGFVRASGPGGQNVNKVATSAQLRFDTRKLT-LPEDAALRLARLAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I++ R R+Q+ N DA+ L M+ +A +P P+
Sbjct: 72 IQAQRFRTQERNRQDAIDRLTEMLGEAMIRPKPR 105
>gi|445498100|ref|ZP_21464955.1| peptidyl-tRNA hydrolase domain containing protein
[Janthinobacterium sp. HH01]
gi|444788095|gb|ELX09643.1| peptidyl-tRNA hydrolase domain containing protein
[Janthinobacterium sp. HH01]
Length = 129
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ T R+ GPGGQ+VN VS+ V +RF + + L E +K++L+ + R+ KDG +++
Sbjct: 6 EVEFTAIRAQGPGGQNVNKVSSAVHLRFDI-VGSSLPEHIKERLLAMRDQRITKDGVVVL 64
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ ++RSQ+ N +A+ L+ ++ A
Sbjct: 65 KAQQSRSQEANKEEALRRLQELVDSVA 91
>gi|406831099|ref|ZP_11090693.1| class I peptide chain release factor [Schlesneria paludicola DSM
18645]
Length = 147
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V R E + +RSSGPGGQ+VN V++K +R+ V + L DV+++ + ++
Sbjct: 11 VTRRVRIPCSEFSWSVARSSGPGGQNVNKVNSKAILRWSVVQSKELPADVRERFVTAFRS 70
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
R+ DG ++I S+R R Q N+ D + LR MI A P
Sbjct: 71 RMTNDGDIVISSERYRDQLKNVGDCLEKLRAMIESIAIP 109
>gi|358637940|dbj|BAL25237.1| peptide chain release factor [Azoarcus sp. KH32C]
Length = 134
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
P S +E++IT R+ G GGQ+VN VS V +RF + AA+ L E+++++L++L +R+
Sbjct: 3 PDISIPPDEVEITAIRAQGAGGQNVNKVSNAVHLRFDI-AASSLPEEIRERLLKLRDHRI 61
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ DG +IIK+ + RS + N +A+ L++++
Sbjct: 62 SGDGVVIIKAQKFRSLEKNRMEALRRLQDLV 92
>gi|218459483|ref|ZP_03499574.1| hypothetical protein RetlK5_08337 [Rhizobium etli Kim 5]
Length = 145
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F V + LN+ VK I L RL+KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNVANSPSLNDRVKANAIRLAGRRLSKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARERLKELILQAA 104
>gi|388565874|ref|ZP_10152354.1| class i peptide chain release factor [Hydrogenophaga sp. PBC]
gi|388266859|gb|EIK92369.1| class i peptide chain release factor [Hydrogenophaga sp. PBC]
Length = 136
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+D T R+ G GGQ+VN VS V +RF V ++ L E VK +L+ L+ RL ++G ++I
Sbjct: 11 EVDFTAIRAQGAGGQNVNKVSNAVHLRFAVRGSS-LPEAVKARLLALSDTRLTQEGVIVI 69
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ +RS + N A+A+ L+ M+ A P
Sbjct: 70 KAQGSRSLEQNKAEALARLQAMVDAVAVP 98
>gi|405969424|gb|EKC34395.1| ADP-ribosylation factor-like protein 4C [Crassostrea gigas]
Length = 364
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 111 IRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWK 170
+RF V +A W+ E +KK LIE K R+ KDG L++ S++TR+Q LN AD + +R MI+
Sbjct: 218 VRFHVESATWIPEWIKKNLIENEKGRITKDGDLVVTSEKTRTQMLNQADCLDKVREMIYN 277
Query: 171 AAKPAPQISED 181
+AK +++E+
Sbjct: 278 SAKKPVEMTEE 288
>gi|163852648|ref|YP_001640691.1| class I peptide chain release factor [Methylobacterium extorquens
PA1]
gi|240139981|ref|YP_002964458.1| Class I peptide chain release factor domain [Methylobacterium
extorquens AM1]
gi|254562407|ref|YP_003069502.1| Class I peptide chain release factor domain [Methylobacterium
extorquens DM4]
gi|163664253|gb|ABY31620.1| Class I peptide chain release factor [Methylobacterium extorquens
PA1]
gi|240009955|gb|ACS41181.1| Class I peptide chain release factor domain [Methylobacterium
extorquens AM1]
gi|254269685|emb|CAX25657.1| Class I peptide chain release factor domain [Methylobacterium
extorquens DM4]
Length = 140
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
P+ EL+ + R+SGPGGQ+VN +ST V +RF V + L + V +L+ L
Sbjct: 5 CTPQIEIDEAELEEAFVRASGPGGQNVNKLSTAVQLRFDVRRSRSLPDAVAVRLMRLAGR 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADA 160
RL +G L+I + R R+Q+ N ADA
Sbjct: 65 RLTGEGVLVINAQRFRTQERNRADA 89
>gi|90422901|ref|YP_531271.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodopseudomonas
palustris BisB18]
gi|90104915|gb|ABD86952.1| Class I peptide chain release factor [Rhodopseudomonas palustris
BisB18]
Length = 140
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 77 IPRFSYITEELDI--TYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
I R +I E+ DI T+ R+SGPGGQ+VN +ST +RF L D + +L L
Sbjct: 4 IARDLFIDEDKDIEVTFVRASGPGGQNVNKLSTAAQLRFDTRRIT-LPADAELRLSRLAG 62
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
R+ KDG ++I + R R+Q+ N ADA+ L ++ +A +P P+
Sbjct: 63 QRMTKDGVIVIHAQRFRTQERNRADAIDRLLELLREAMVRPVPR 106
>gi|298528758|ref|ZP_07016162.1| Class I peptide chain release factor [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512410|gb|EFI36312.1| Class I peptide chain release factor [Desulfonatronospira
thiodismutans ASO3-1]
Length = 137
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S E+D+ R+SGPGGQ VN ++ V + F + A++ L + K++L+ LN R+ +
Sbjct: 7 LSIKESEIDLQAVRASGPGGQKVNKTASAVQLFFDIKASS-LPQIYKERLLNLNDQRITR 65
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
DG ++I+++R+RSQ N +A+ L+ +I +A +P P+
Sbjct: 66 DGVIVIRAERSRSQAKNKKEALKKLQLLIQQATVEPEPR 104
>gi|289677292|ref|ZP_06498182.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas syringae pv.
syringae FF5]
gi|422668019|ref|ZP_16727879.1| hypothetical protein PSYAP_17736 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330980380|gb|EGH78491.1| hypothetical protein PSYAP_17736 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 137
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF +NA++ L K++L+ L+ +R+ DG +++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPPFYKERLLALSDSRITSDGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AA+
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAR 100
>gi|297184056|gb|ADI20176.1| protein chain release factor b [uncultured alpha proteobacterium
EB080_L06A09]
Length = 139
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 85 EELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
EE +IT S RSSGPGGQHVN VS+ V++RF+ + L VK +L +++ + KDG
Sbjct: 11 EEWEITESFMRSSGPGGQHVNKVSSAVELRFEAERSPNLPSYVKTRLRKISGRKWTKDGA 70
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
LII +++ R Q LN A A+ L +I +A +
Sbjct: 71 LIITAEKHRLQPLNRALALKKLITLITEATE 101
>gi|90022843|ref|YP_528670.1| hypothetical protein Sde_3201 [Saccharophagus degradans 2-40]
gi|89952443|gb|ABD82458.1| Class I peptide chain release factor [Saccharophagus degradans
2-40]
Length = 137
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
+E++++ R+ G GGQ+VN VS+ + +RF + A++ L E K++L+ L +R++K+G L
Sbjct: 12 ADEIELSAIRAQGAGGQNVNKVSSAIHLRFDIRASS-LPEFYKERLLGLKDSRISKEGVL 70
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKA 171
IIK+ + R+Q+ N DA+ L+ ++ +A
Sbjct: 71 IIKAQQFRTQEKNREDALARLKELVLQA 98
>gi|348028856|ref|YP_004871542.1| peptidyl-tRNA hydrolase domain-containing protein [Glaciecola
nitratireducens FR1064]
gi|347946199|gb|AEP29549.1| peptidyl-tRNA hydrolase domain protein [Glaciecola nitratireducens
FR1064]
Length = 138
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ + S E +++ +RS G GGQHVN V+T + +RF +N ++ L + +K++L+ N +
Sbjct: 5 ITHKISIEESEFNLSATRSQGAGGQHVNKVATAIYLRFDINQSS-LPDKIKEKLLNSNDS 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+ DG LII++ R+Q+ N DA+ L ++I ++ P
Sbjct: 64 RITSDGVLIIRAQSHRTQEQNKRDAIKRLADVIKESTYEKP 104
>gi|443469052|ref|ZP_21059246.1| Hypothetical protein YaeJ translation release factor like protein
[Pseudomonas pseudoalcaligenes KF707]
gi|442898341|gb|ELS25075.1| Hypothetical protein YaeJ translation release factor like protein
[Pseudomonas pseudoalcaligenes KF707]
Length = 137
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF +NA++ L + K++L+ L R+ DG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDINASS-LPDFYKERLLALRDGRITADGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A+
Sbjct: 73 KAQQYRTQEQNRADALERLAELIRSVAQ 100
>gi|218531489|ref|YP_002422305.1| class I peptide chain release factor [Methylobacterium extorquens
CM4]
gi|218523792|gb|ACK84377.1| Class I peptide chain release factor [Methylobacterium extorquens
CM4]
Length = 140
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
P+ EL+ + R+SGPGGQ+VN +ST V +RF V + L + V +L+ L
Sbjct: 5 CTPQIQIDEAELEEAFVRASGPGGQNVNKLSTAVQLRFDVRRSRSLPDAVAVRLMRLAGR 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADA 160
RL +G L+I + R R+Q+ N ADA
Sbjct: 65 RLTGEGVLVINAQRFRTQERNRADA 89
>gi|456357790|dbj|BAM92235.1| putative Class I peptide chain release factor domain protein
[Agromonas oligotrophica S58]
Length = 138
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++I++ R+SGPGGQ+VN +ST +RF + L ED ++L L R+ K+G ++I
Sbjct: 14 DIEISFVRASGPGGQNVNKLSTSAQLRFDTSRIT-LPEDAAERLARLAGQRMTKNGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+++R R+Q+ N ADA+ L ++ +A
Sbjct: 73 QAERFRTQERNKADAIERLTTLLREA 98
>gi|385330617|ref|YP_005884568.1| class I peptide chain release factor [Marinobacter adhaerens HP15]
gi|311693767|gb|ADP96640.1| class I peptide chain release factor [Marinobacter adhaerens HP15]
Length = 137
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++IT R+ G GGQ+VN V++ V +RF + ++ L K++L+ LN R++K+G LII
Sbjct: 14 EIEITQIRAQGAGGQNVNKVASAVHLRFDIPNSS-LPPFYKERLMSLNDQRISKEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ R+ +LN DA+ L+ +I +A KP
Sbjct: 73 KAQSFRTLELNKEDALERLKELIQEAVKP 101
>gi|170742386|ref|YP_001771041.1| class I peptide chain release factor [Methylobacterium sp. 4-46]
gi|168196660|gb|ACA18607.1| Class I peptide chain release factor [Methylobacterium sp. 4-46]
Length = 141
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
P S EL+ ++ R+SGPGGQ+VN V+T V +RF V + L V +L++L
Sbjct: 5 CTPSISIDESELEESFVRASGPGGQNVNKVATAVQLRFDVRRSPSLPNAVAIRLMKLAGR 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL +G L+I + R+Q N A+A L ++ +AA
Sbjct: 65 RLTAEGVLVITAQEHRTQDRNRAEARERLAELVREAA 101
>gi|194334780|ref|YP_002016640.1| class I peptide chain release factor [Prosthecochloris aestuarii
DSM 271]
gi|194312598|gb|ACF46993.1| Class I peptide chain release factor [Prosthecochloris aestuarii
DSM 271]
Length = 136
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+VIP E++IT RS GPGGQ+VN V+T V +RF V A++ L ++L L
Sbjct: 7 IVIP-----DSEIEITAIRSQGPGGQNVNKVATAVQLRF-VIASSSLPYRCCQRLYALRD 60
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R++ G ++IK+ R R+Q+ N DA R +I KA
Sbjct: 61 CRISDAGVIVIKAGRYRTQESNRQDAFERFRQIICKA 97
>gi|407717202|ref|YP_006838482.1| protein release subunit factor B [Cycloclasticus sp. P1]
gi|407257538|gb|AFT67979.1| Protein chain release factor B [Cycloclasticus sp. P1]
Length = 137
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V+ P + +E+ +T R+ G GGQ+VN +S+ + +RF +NA++ L E K++L+
Sbjct: 3 VITPHITLADDEIKLTAIRAQGAGGQNVNKLSSAIHLRFDINASS-LPELFKQRLLSRQD 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+R+N G +IIK+ + R+Q+ N ADA+ L+ +I
Sbjct: 62 HRINNMGIIIIKAQQYRTQEKNRADALERLKQII 95
>gi|119477693|ref|ZP_01617843.1| hypothetical protein GP2143_09530 [marine gamma proteobacterium
HTCC2143]
gi|119449196|gb|EAW30436.1| hypothetical protein GP2143_09530 [marine gamma proteobacterium
HTCC2143]
Length = 137
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ELD + R+ G GGQ+VN VST + +RF + ++ L E K++L+ R+NKDG ++
Sbjct: 13 DELDFSAIRAQGAGGQNVNKVSTAIHLRFDIKLSS-LAEVYKERLLAFKDQRINKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
IK+ R RSQ N DA+ L ++ A
Sbjct: 72 IKAQRFRSQDKNRDDALGRLAELVRTA 98
>gi|336172380|ref|YP_004579518.1| class I peptide chain release factor [Lacinutrix sp. 5H-3-7-4]
gi|334726952|gb|AEH01090.1| Class I peptide chain release factor [Lacinutrix sp. 5H-3-7-4]
Length = 135
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
+ +E + RSSG GGQHVN VSTKV++ F + +N LNE+ K+++++ NR++KDG
Sbjct: 7 LIKEFNFKAIRSSGAGGQHVNKVSTKVELSFAILESNVLNEEQKQKILKKLANRISKDGA 66
Query: 143 LIIKSDRTRSQQLN 156
I++ +RSQ N
Sbjct: 67 FILQCGESRSQYRN 80
>gi|427720916|ref|YP_007068910.1| class I peptide chain release factor [Calothrix sp. PCC 7507]
gi|427353352|gb|AFY36076.1| Class I peptide chain release factor [Calothrix sp. PCC 7507]
Length = 137
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ RS G GGQ+VN VST + +RF + A++ L K+QL+ LN R+ ++G ++I
Sbjct: 14 EIEISAIRSQGAGGQNVNKVSTAIHLRFDIEASS-LPAFYKEQLLNLNDRRITQEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +AM L+ ++ A
Sbjct: 73 KAQEHRSQEQNREEAMHRLQQLVKSA 98
>gi|372267956|ref|ZP_09504004.1| hypothetical protein AlS89_08649 [Alteromonas sp. S89]
Length = 138
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++ RS G GGQ+VN VST + +RF + A++ L VK++L L R+ +G ++
Sbjct: 13 DEVEMHAMRSGGAGGQNVNKVSTAIHLRFDIGASS-LPGPVKQRLFALRDQRITDEGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
IK R R+Q+ N AD + LR MI
Sbjct: 72 IKGQRFRTQEKNRADVLERLREMI 95
>gi|298491621|ref|YP_003721798.1| class I peptide chain release factor ['Nostoc azollae' 0708]
gi|298233539|gb|ADI64675.1| Class I peptide chain release factor ['Nostoc azollae' 0708]
Length = 137
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ I+ RS G GGQ+VN V+T + +RF +NA++ L+ K++L+ L R+ KDG ++I
Sbjct: 14 EISISAIRSQGAGGQNVNKVATAIHLRFHINASS-LSPLYKERLLNLGDQRITKDGIIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI---------WKAAKPAPQISEDTID 184
K+ + R+Q+ N DA+ L+ +I K KP ++ ID
Sbjct: 73 KAQQHRTQEQNKEDALNRLQTLIKSITITPAKRKPTKPTGRVKNKRID 120
>gi|126667218|ref|ZP_01738192.1| hypothetical protein MELB17_07674 [Marinobacter sp. ELB17]
gi|126628374|gb|EAZ98997.1| hypothetical protein MELB17_07674 [Marinobacter sp. ELB17]
Length = 137
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 9/93 (9%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDV----KKQLIELNKNRLNKDG 141
E++IT R+ G GGQ+VN VS+ V +RF + W N + K++L+ LN R++KDG
Sbjct: 14 EIEITQIRAQGAGGQNVNKVSSAVHLRFDI----W-NSSLPLFYKERLMALNDQRISKDG 68
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
L++K+ R+ +LN DAM L+ +I +A KP
Sbjct: 69 VLVLKAQSHRTLELNKNDAMQRLKALILQAVKP 101
>gi|378828128|ref|YP_005190860.1| putative class I peptide chain release factor [Sinorhizobium fredii
HH103]
gi|365181180|emb|CCE98035.1| putative class I peptide chain release factor [Sinorhizobium fredii
HH103]
Length = 144
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + A+ L++ +K ++L R +KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIQASPSLSDRIKANALKLAGRRASKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++ R RSQ N DA L+ +I KAA+
Sbjct: 78 EASRFRSQDRNREDARERLKELILKAAE 105
>gi|119509957|ref|ZP_01629099.1| hypothetical protein N9414_05739 [Nodularia spumigena CCY9414]
gi|119465423|gb|EAW46318.1| hypothetical protein N9414_05739 [Nodularia spumigena CCY9414]
Length = 137
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ RS G GGQ+VN VST + +RF + A++ L K+QL++LN R+ ++G ++I
Sbjct: 14 EIEMSAIRSQGAGGQNVNKVSTAIHLRFDIEASS-LPAFYKEQLMKLNDRRITQEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L+ +I A
Sbjct: 73 KAQEYRSQEKNREEALQRLKQLIQSA 98
>gi|398863455|ref|ZP_10619020.1| protein chain release factor B [Pseudomonas sp. GM78]
gi|398247667|gb|EJN33103.1| protein chain release factor B [Pseudomonas sp. GM78]
Length = 137
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ +G LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELIQSATK 100
>gi|260866341|ref|YP_003232743.1| hypothetical protein ECO111_0193 [Escherichia coli O111:H- str.
11128]
gi|415824006|ref|ZP_11512381.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli OK1180]
gi|417190954|ref|ZP_12013550.1| RF-1 domain protein [Escherichia coli 4.0522]
gi|417589813|ref|ZP_12240534.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 2534-86]
gi|419195151|ref|ZP_13738566.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8A]
gi|419891791|ref|ZP_14411832.1| hypothetical protein ECO9570_13337 [Escherichia coli O111:H8 str.
CVM9570]
gi|419893471|ref|ZP_14413455.1| hypothetical protein ECO9574_18834 [Escherichia coli O111:H8 str.
CVM9574]
gi|420087301|ref|ZP_14599272.1| hypothetical protein ECO9602_25970 [Escherichia coli O111:H8 str.
CVM9602]
gi|420092420|ref|ZP_14604122.1| hypothetical protein ECO9634_29308 [Escherichia coli O111:H8 str.
CVM9634]
gi|424774795|ref|ZP_18201805.1| hypothetical protein CFSAN001632_27224 [Escherichia coli O111:H8
str. CFSAN001632]
gi|257762697|dbj|BAI34192.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|323176507|gb|EFZ62099.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli OK1180]
gi|345346171|gb|EGW78507.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 2534-86]
gi|378054665|gb|EHW16943.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8A]
gi|386191926|gb|EIH80667.1| RF-1 domain protein [Escherichia coli 4.0522]
gi|388348810|gb|EIL14378.1| hypothetical protein ECO9570_13337 [Escherichia coli O111:H8 str.
CVM9570]
gi|388367405|gb|EIL31089.1| hypothetical protein ECO9574_18834 [Escherichia coli O111:H8 str.
CVM9574]
gi|394393551|gb|EJE70236.1| hypothetical protein ECO9602_25970 [Escherichia coli O111:H8 str.
CVM9602]
gi|394400438|gb|EJE76352.1| hypothetical protein ECO9634_29308 [Escherichia coli O111:H8 str.
CVM9634]
gi|421933651|gb|EKT91438.1| hypothetical protein CFSAN001632_27224 [Escherichia coli O111:H8
str. CFSAN001632]
Length = 140
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L+E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LSEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG ++IK+ RSQ+LN A+ L
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARL 91
>gi|193211925|ref|YP_001997878.1| peptidyl-tRNA hydrolase domain-containing protein [Chlorobaculum
parvum NCIB 8327]
gi|193085402|gb|ACF10678.1| Class I peptide chain release factor [Chlorobaculum parvum NCIB
8327]
Length = 138
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I RS G GGQ+VN V T V +RF + A++ L + +K++L++L R++K+G ++I
Sbjct: 14 EIEIRTMRSQGAGGQNVNKVETAVHLRFDIGASS-LPDHIKERLMQLRDRRISKEGIIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWK 170
++ R RSQ+ N DA+ + ++ K
Sbjct: 73 RAQRFRSQEKNRQDALDRFQELLKK 97
>gi|427726408|ref|YP_007053092.1| protein chain release factor B [Nostoc sp. PCC 7524]
gi|427368577|gb|AFY51297.1| protein chain release factor B [Nostoc sp. PCC 7524]
Length = 137
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+I+ RS G GGQ+VN VST + +RF + ++ L K+QL++LN R+ ++G ++I
Sbjct: 14 ELEISAIRSQGAGGQNVNKVSTAIHLRFNIETSS-LPTFYKEQLLKLNDRRITQEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L+ +I A
Sbjct: 73 KAQEHRSQEQNREEALERLKELIKSA 98
>gi|404316717|ref|ZP_10964650.1| hypothetical protein OantC_00965 [Ochrobactrum anthropi CTS-325]
Length = 145
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R + ++L+ ++ R+SGPGGQ+VN VST V +RF A L ED+ +L +L
Sbjct: 10 ITNRLTIREDDLEESFIRASGPGGQNVNKVSTAVQLRFHAVRA-GLPEDILSRLFKLAGQ 68
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+ KDG ++I+++R R+Q+ N DA L +I KAA+
Sbjct: 69 KGTKDGDILIEANRFRTQERNREDARERLIALIAKAAE 106
>gi|422297812|ref|ZP_16385439.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
avellanae BPIC 631]
gi|422591963|ref|ZP_16666597.1| hypothetical protein PSYMP_25876 [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422653712|ref|ZP_16716472.1| hypothetical protein PSYAC_19315 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330879714|gb|EGH13863.1| hypothetical protein PSYMP_25876 [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330966755|gb|EGH67015.1| hypothetical protein PSYAC_19315 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|407990673|gb|EKG32711.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
avellanae BPIC 631]
Length = 137
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF +NA++ L K++L+ L+ +R+ DG +++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDINASS-LPPFYKERLLALSDSRITSDGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAK 100
>gi|254294333|ref|YP_003060356.1| class I peptide chain release factor [Hirschia baltica ATCC 49814]
gi|254042864|gb|ACT59659.1| Class I peptide chain release factor [Hirschia baltica ATCC 49814]
Length = 138
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
F+ I L+ ++ R+ GPGGQ+VN VST V +RF + + E K+++ +++ K
Sbjct: 6 FTDIEPFLEESFIRAGGPGGQNVNKVSTAVQLRFDFLNCDTIFETTKRRMRAKLSSKITK 65
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
DG +IIK+ + R+QQLN DA L +M+ +AA
Sbjct: 66 DGGIIIKAQQHRTQQLNREDARERLLSMLNEAA 98
>gi|452751759|ref|ZP_21951504.1| hypothetical protein C725_1290 [alpha proteobacterium JLT2015]
gi|451960978|gb|EMD83389.1| hypothetical protein C725_1290 [alpha proteobacterium JLT2015]
Length = 145
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L T+ R+ GPGGQ+VN VST V +RF + AA L VK++ EL RL KDG ++I
Sbjct: 21 DLSETFLRAGGPGGQNVNKVSTAVQLRFDLRAAR-LPLAVKRRAAELAGQRLTKDGEILI 79
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+++ R+ N DA L ++ KAA P PQ
Sbjct: 80 RAETYRTLAANREDAEARLIALMRKAAVP-PQ 110
>gi|398841079|ref|ZP_10598305.1| protein chain release factor B [Pseudomonas sp. GM102]
gi|398109036|gb|EJL98978.1| protein chain release factor B [Pseudomonas sp. GM102]
Length = 137
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A++ L E K++L+ L +R+ +G LII
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDIPASS-LPEFYKERLLALRDSRITSEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEANRADALERLTELILSATK 100
>gi|344344020|ref|ZP_08774885.1| Class I peptide chain release factor [Marichromatium purpuratum
984]
gi|343804304|gb|EGV22205.1| Class I peptide chain release factor [Marichromatium purpuratum
984]
Length = 140
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P+ EL + R+ GPGGQ+VN V T V + F + + L E V+ +L+ N
Sbjct: 4 ITPQIRIAESELQERFIRAPGPGGQNVNKVETAVQLSFDIATSPSLPEAVRARLLLRNDR 63
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQIS 179
R+++ G + I++ R R+++ N ADA L +I +A A+P P+I+
Sbjct: 64 RIDQSGVVRIEAHRHRTRERNRADARERLAALIREATARPRPRIA 108
>gi|340787537|ref|YP_004753002.1| hypothetical protein CFU_2352 [Collimonas fungivorans Ter331]
gi|340552804|gb|AEK62179.1| hypothetical protein CFU_2352 [Collimonas fungivorans Ter331]
Length = 147
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 59/86 (68%), Gaps = 8/86 (9%)
Query: 82 YITE-------ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
YIT+ E++I+ R+ GPGGQ+VN VS+ + +RF + A++ L E +++L+ LN
Sbjct: 13 YITDSLAIPLSEIEISAVRAQGPGGQNVNKVSSAIHLRFDIRASS-LPEFYQEKLLALND 71
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADA 160
R+ KDG L++K+ ++RSQ+ N ++A
Sbjct: 72 QRITKDGVLVLKAQQSRSQEKNKSEA 97
>gi|424873010|ref|ZP_18296672.1| protein chain release factor B [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393168711|gb|EJC68758.1| protein chain release factor B [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 147
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LN+ VK I+L RL+KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIANSPSLNDRVKTNAIKLAGRRLSKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARDRLKELILEAA 104
>gi|365846717|ref|ZP_09387219.1| peptidyl-tRNA hydrolase domain protein [Yokenella regensburgei ATCC
43003]
gi|364573849|gb|EHM51336.1| peptidyl-tRNA hydrolase domain protein [Yokenella regensburgei ATCC
43003]
Length = 138
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 75 VVIPRFSYI-TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I EE+ +T R+ G GGQHVN ST V +RF + A++ L E K++L+E
Sbjct: 2 IVISRTVSIPDEEVVMTAIRAQGAGGQHVNKASTAVHLRFDIRASS-LPEYYKERLLEAR 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWK 170
+ ++ DG +IIK+ RSQ++N A+ L +MI +
Sbjct: 61 HHLISDDGVIIIKAQEYRSQEMNREAAIARLVSMIQE 97
>gi|377820301|ref|YP_004976672.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia sp.
YI23]
gi|357935136|gb|AET88695.1| peptidyl-tRNA hydrolase domain protein [Burkholderia sp. YI23]
Length = 136
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A++ L E +K +L+ L+ +R+ +DG ++I
Sbjct: 12 EIELTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPEHIKARLLALSDSRVTRDGVIVI 70
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q +N A A+ L +I
Sbjct: 71 KAQEHRTQDMNRAAALARLDELI 93
>gi|312114451|ref|YP_004012047.1| class I peptide chain release factor [Rhodomicrobium vannielii ATCC
17100]
gi|311219580|gb|ADP70948.1| Class I peptide chain release factor [Rhodomicrobium vannielii ATCC
17100]
Length = 140
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ +T+ R+SGPGGQ+VN VST +RF + L E V+ +L + +RL KDG +++
Sbjct: 14 EIAVTFIRASGPGGQNVNKVSTAAQLRFDARRSPSLPEAVRFRLERIAGSRLTKDGEIVL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+Q+ N D + L MI +AA P
Sbjct: 74 TGGSYRTQEANRRDVIDRLVRMIRQAAIERP 104
>gi|116249804|ref|YP_765642.1| peptidyl-tRNA hydrolase domain-containing protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|241206981|ref|YP_002978077.1| peptidyl-tRNA hydrolase domain-containing protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|115254452|emb|CAK05526.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
gi|240860871|gb|ACS58538.1| Class I peptide chain release factor [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 147
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LN+ VK I+L RL+KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIANSPSLNDRVKTNAIKLAGRRLSKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARDRLKELILEAA 104
>gi|153008166|ref|YP_001369381.1| peptidyl-tRNA hydrolase domain-containing protein [Ochrobactrum
anthropi ATCC 49188]
gi|151560054|gb|ABS13552.1| Class I peptide chain release factor [Ochrobactrum anthropi ATCC
49188]
Length = 157
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R + ++L+ ++ R+SGPGGQ+VN VST V +RF A L ED+ +L +L
Sbjct: 22 ITNRLTIREDDLEESFIRASGPGGQNVNKVSTAVQLRFHAVRAG-LPEDILSRLFKLAGQ 80
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+ KDG ++I+++R R+Q+ N DA L +I KAA+
Sbjct: 81 KGTKDGDILIEANRFRTQERNREDARERLIALIAKAAE 118
>gi|398355713|ref|YP_006401177.1| class I peptide chain release factor [Sinorhizobium fredii USDA
257]
gi|390131039|gb|AFL54420.1| putative class I peptide chain release factor [Sinorhizobium fredii
USDA 257]
Length = 144
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + A+ L + VK ++L R +KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFDIQASPSLPDRVKASALKLAGRRASKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++ R RSQ N DA L+ +I KAA+
Sbjct: 78 EASRFRSQDRNREDARERLKELILKAAE 105
>gi|254486382|ref|ZP_05099587.1| peptidyl-tRNA hydrolase domain protein [Roseobacter sp. GAI101]
gi|214043251|gb|EEB83889.1| peptidyl-tRNA hydrolase domain protein [Roseobacter sp. GAI101]
Length = 140
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL T+ R+SGPGGQ+VN VS+ V++RF+ + L+ VK +L L R +G L+I
Sbjct: 14 ELTETFMRASGPGGQNVNKVSSAVELRFEAATSPSLSAPVKTRLRRLAGRRWTTEGALVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
+ D TRSQ N A L+ +I A P
Sbjct: 74 QCDETRSQARNREIARDRLKALIISALTP 102
>gi|320102154|ref|YP_004177745.1| class I peptide chain release factor [Isosphaera pallida ATCC
43644]
gi|319749436|gb|ADV61196.1| Class I peptide chain release factor [Isosphaera pallida ATCC
43644]
Length = 142
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R EE+ + RSSGPGGQ+VN V+T V +RF V + L+E+VK +L+ L R+
Sbjct: 9 RVGIRKEEVTFEFIRSSGPGGQNVNKVATAVRLRFNVVESPSLSEEVKSRLLGLVGRRVG 68
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
DG L+I + R+Q+ N A++ L +++ + A P++ T
Sbjct: 69 TDGVLVITAQAERTQEANRRVALSWLIDLV-RLACVRPEVRRPT 111
>gi|420345291|ref|ZP_14846725.1| putative-tRNA hydrolase domain protein [Shigella boydii 965-58]
gi|391276698|gb|EIQ35463.1| putative-tRNA hydrolase domain protein [Shigella boydii 965-58]
Length = 140
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLEAVI 95
>gi|114705089|ref|ZP_01437997.1| hypothetical protein FP2506_09131 [Fulvimarina pelagi HTCC2506]
gi|114539874|gb|EAU42994.1| hypothetical protein FP2506_09131 [Fulvimarina pelagi HTCC2506]
Length = 143
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+ IP + EL + + GPGGQ+VN VS+ V +RF + ++ D K++L+ L
Sbjct: 11 ITIPEY-----ELFEQFVTAGGPGGQNVNKVSSAVQLRFYAAQSGAISSDAKRRLMRLAG 65
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R K+G ++I++ R R+Q+ N DA LR ++ +A
Sbjct: 66 RRATKEGEVLIEASRHRTQERNRDDARERLRQLVLEA 102
>gi|389581536|ref|ZP_10171563.1| protein chain release factor B [Desulfobacter postgatei 2ac9]
gi|389403171|gb|EIM65393.1| protein chain release factor B [Desulfobacter postgatei 2ac9]
Length = 136
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 93 RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRS 152
RS GPGGQ+VN VS+ V IRF ++A++ L E++K +L+ LN R+ G ++IK+ RS
Sbjct: 20 RSRGPGGQNVNKVSSGVHIRFDIHASD-LTEEIKAKLLSLNDRRITPQGIIVIKAMTFRS 78
Query: 153 QQLNLADAMTTLRNMIWKAAKP 174
N D + L +I +A +P
Sbjct: 79 AAKNREDGLERLAELIRRAVRP 100
>gi|386285954|ref|ZP_10063158.1| hypothetical protein DOK_01174 [gamma proteobacterium BDW918]
gi|385280997|gb|EIF44905.1| hypothetical protein DOK_01174 [gamma proteobacterium BDW918]
Length = 137
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++++ R+ G GGQ+VN VS+ + +RF + A++ L + K++L+ N R+ KDG +I
Sbjct: 13 DEIELSAIRAQGAGGQNVNKVSSAIHLRFDIKASS-LPDYYKQRLLNKNDQRITKDGIII 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
IK+ + R+Q+ N DA+ LR I ++ K P
Sbjct: 72 IKAQQFRTQEKNRDDALQRLREFIIESVKTLP 103
>gi|83718425|ref|YP_443361.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
thailandensis E264]
gi|167620497|ref|ZP_02389128.1| hypothetical protein BthaB_29594 [Burkholderia thailandensis Bt4]
gi|257139610|ref|ZP_05587872.1| peptidyl-tRNA hydrolase domain protein [Burkholderia thailandensis
E264]
gi|83652250|gb|ABC36313.1| peptidyl-tRNA hydrolase, putative [Burkholderia thailandensis E264]
Length = 134
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+++ +E+++T R+ G GGQ+VN VS+ + +RF + A++ L +DVK +L+ R+
Sbjct: 4 RYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPDDVKARLLARADQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
++G ++IK+ R+Q+ N A A+ L +I A
Sbjct: 63 REGIVVIKAQEYRTQEKNRAAALARLDTLIRSAG 96
>gi|395785406|ref|ZP_10465138.1| hypothetical protein ME5_00456 [Bartonella tamiae Th239]
gi|423717695|ref|ZP_17691885.1| hypothetical protein MEG_01425 [Bartonella tamiae Th307]
gi|395424953|gb|EJF91124.1| hypothetical protein ME5_00456 [Bartonella tamiae Th239]
gi|395427095|gb|EJF93211.1| hypothetical protein MEG_01425 [Bartonella tamiae Th307]
Length = 145
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Query: 82 YITEELDITYS-------RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
Y+T L I S RSSGPGGQ+VN VST V +R+ A L ++LI+L
Sbjct: 9 YVTNTLRIRPSDFEENFIRSSGPGGQNVNKVSTAVQLRYFAQKAG-LPHTTYQRLIKLAG 67
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R KDG ++I++ R R Q+ N DA L ++ KAA+P P
Sbjct: 68 QRATKDGDILIEASRFRLQERNRQDARERLIKLLQKAAEPPP 109
>gi|340617511|ref|YP_004735964.1| hypothetical protein zobellia_1520 [Zobellia galactanivorans]
gi|339732308|emb|CAZ95576.1| Conserved hypothetical protein [Zobellia galactanivorans]
Length = 134
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
+ + +EL+ RSSG GGQHVN VSTK+D+ F + +N L K+++ +RL KD
Sbjct: 4 AQLIQELNFKAVRSSGAGGQHVNKVSTKIDLSFSLEDSNGLTTTEKERIYRKIGHRLTKD 63
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
G L ++ D TRSQ N A+ ++ +A
Sbjct: 64 GVLQMQCDETRSQHRNKELAIARFLTLMEEA 94
>gi|365896204|ref|ZP_09434288.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. STM 3843]
gi|365423051|emb|CCE06830.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. STM 3843]
Length = 139
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANW-LNEDVKKQLIELNKNRLNKDGYLI 144
+++I++ R+SGPGGQ+VN +ST +RF +A+ L ED +L L R+ K+G ++
Sbjct: 14 DIEISFVRASGPGGQNVNKLSTAAQLRF--DASRLPLPEDAAARLERLAGQRMTKNGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
I++DR R+Q+ N ADA+ L ++ +A
Sbjct: 72 IQADRFRTQERNRADAIERLVTLLREA 98
>gi|359797579|ref|ZP_09300162.1| hypothetical protein KYC_11588 [Achromobacter arsenitoxydans SY8]
gi|359364382|gb|EHK66096.1| hypothetical protein KYC_11588 [Achromobacter arsenitoxydans SY8]
Length = 138
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 81 SYITEELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
S +E D+T++ R+ G GGQ+VN VS+ V +RF V A++ L +V+ L +N +R++
Sbjct: 7 SLYVDERDLTFTMIRAQGAGGQNVNKVSSAVHLRFDVRASS-LPPEVQDALCAVNDHRIS 65
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
K+G ++IKS RSQ+ N A+A+ L M+ A
Sbjct: 66 KEGVIVIKSQSFRSQEKNRAEAIERLLAMVRSA 98
>gi|420238104|ref|ZP_14742534.1| protein chain release factor B [Rhizobium sp. CF080]
gi|398088702|gb|EJL79259.1| protein chain release factor B [Rhizobium sp. CF080]
Length = 144
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + + + + L E VK+ I+L R++
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFYDIVNSPSLPERVKENAIKLAGKRVS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
KDG L+I+++R RSQ+ N DA L+ +I KAA+
Sbjct: 71 KDGVLMIEANRFRSQERNREDARERLKELILKAAE 105
>gi|443324118|ref|ZP_21053066.1| protein chain release factor B [Xenococcus sp. PCC 7305]
gi|442796086|gb|ELS05408.1| protein chain release factor B [Xenococcus sp. PCC 7305]
Length = 138
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 64/98 (65%), Gaps = 6/98 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V+IP + E+DI RS G GGQ+VN V+T + +RF + A++ L + +++L++L
Sbjct: 8 VIIP-----SREIDINAVRSQGAGGQNVNKVATAIHLRFDIKASS-LPDFYQEKLLKLRD 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+R++KDG +IIK+ R+Q+ N DA+ L ++I A+
Sbjct: 62 SRISKDGVVIIKAQNFRTQEQNKEDALKRLLDLIKNAS 99
>gi|412985967|emb|CCO17167.1| predicted protein [Bathycoccus prasinos]
Length = 381
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 3/90 (3%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVN---AANWLNEDVKKQLIELNKNRLNKDGY 142
+++I++SRS G GGQ+VN V+TKVD+R +N A+ +L + V +L L KNR+N +
Sbjct: 247 DVEISFSRSGGAGGQNVNKVNTKVDMRLSLNGAVASGFLPKWVAARLRILEKNRINSEDC 306
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
L++ S + R+Q N+ DA+ + ++I A+
Sbjct: 307 LVVNSTKHRTQSKNIDDALEKMDDIIQSAS 336
>gi|425113513|ref|ZP_18515368.1| aminoacyl-tRNA hydrolase [Escherichia coli 8.0566]
gi|408573891|gb|EKK49697.1| aminoacyl-tRNA hydrolase [Escherichia coli 8.0566]
Length = 138
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++I
Sbjct: 12 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVI 70
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L MI
Sbjct: 71 KAQEYRSQELNREAALARLVAMI 93
>gi|91978494|ref|YP_571153.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodopseudomonas
palustris BisB5]
gi|91684950|gb|ABE41252.1| Class I peptide chain release factor [Rhodopseudomonas palustris
BisB5]
Length = 139
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I++ R+SGPGGQ+VN +ST +RF L ED +LI L R+ K+G ++
Sbjct: 13 DDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKI-ALPEDAALRLIGLAGQRMTKEGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
I + R R+Q+ N ADA+ L ++ A +P P+
Sbjct: 72 IHAQRFRTQERNRADAIDRLLELLRAAMVRPIPR 105
>gi|71906176|ref|YP_283763.1| class I peptide chain release factor [Dechloromonas aromatica RCB]
gi|71845797|gb|AAZ45293.1| Class I peptide chain release factor [Dechloromonas aromatica RCB]
Length = 133
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 77 IPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNR 136
+P + E++ R+ G GGQ+VN VS V +RF + AA+ L E++K +L+ + R
Sbjct: 1 MPPIALNESEVEFIAIRAQGAGGQNVNKVSNAVHLRFDI-AASSLPEEIKAKLLAMRDQR 59
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ DG ++IK+ + RS + N D + LR +I AA
Sbjct: 60 ISSDGIVVIKAQKHRSLERNREDGLVRLRELIAAAA 95
>gi|410092393|ref|ZP_11288920.1| hypothetical protein AAI_16883 [Pseudomonas viridiflava UASWS0038]
gi|409760245|gb|EKN45403.1| hypothetical protein AAI_16883 [Pseudomonas viridiflava UASWS0038]
Length = 137
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF ++A++ L K++L+ L+ +R+ DG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDIHASS-LPPFYKERLLALSDSRITSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAK 100
>gi|400752975|ref|YP_006561343.1| peptidyl-tRNA hydrolase-like protein [Phaeobacter gallaeciensis
2.10]
gi|398652128|gb|AFO86098.1| peptidyl-tRNA hydrolase-like protein [Phaeobacter gallaeciensis
2.10]
Length = 143
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L VK +L L R KDG +I+
Sbjct: 18 ELTESFMRASGPGGQNVNKVSSAVELRFEAARSPALTPAVKSRLKRLAGRRWTKDGAIIL 77
Query: 146 KSDRTRSQQLN 156
+ D TRSQQ N
Sbjct: 78 QCDETRSQQRN 88
>gi|417606122|ref|ZP_12256655.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_DG131-3]
gi|345366290|gb|EGW98382.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_DG131-3]
Length = 140
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ ++
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAVS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|83950821|ref|ZP_00959554.1| hypothetical protein ISM_06965 [Roseovarius nubinhibens ISM]
gi|83838720|gb|EAP78016.1| hypothetical protein ISM_06965 [Roseovarius nubinhibens ISM]
Length = 140
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + RSSGPGGQ+VN VST V++RF+ + L + VK++L L R G L+I
Sbjct: 14 ELTEQFVRSSGPGGQNVNKVSTAVELRFEAERSPNLPDPVKRRLKRLAGRRWTDAGTLVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQI 178
+ + TRSQ N A L +I KAA KP +I
Sbjct: 74 QCEETRSQARNREIARQRLAELIAKAAVKPKRRI 107
>gi|443314758|ref|ZP_21044292.1| protein chain release factor B [Leptolyngbya sp. PCC 6406]
gi|442785635|gb|ELR95441.1| protein chain release factor B [Leptolyngbya sp. PCC 6406]
Length = 139
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 62/95 (65%), Gaps = 7/95 (7%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ RS G GGQ+VN V+T + +RF ++A++ L+ K++L+ L R+ KDG +II
Sbjct: 14 EIELSAVRSQGAGGQNVNKVATAIHLRFDIHASS-LSPLYKERLLNLGDRRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIW------KAAKP 174
K+ + R+Q+ N DA+ L+++I KA KP
Sbjct: 73 KAQQHRTQEQNREDALRRLQDLIQSVTVTPKARKP 107
>gi|381158187|ref|ZP_09867420.1| protein chain release factor B [Thiorhodovibrio sp. 970]
gi|380879545|gb|EIC21636.1| protein chain release factor B [Thiorhodovibrio sp. 970]
Length = 139
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 55/86 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++R+ GPGGQ+VN V T V +RF ++ L E+V+++L+ L R +++G + I
Sbjct: 14 ELSERFTRAPGPGGQNVNKVETAVQLRFDAARSSALPEEVRRRLVHLAGRRADQNGVITI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
++ R R+++ N DA L ++I +A
Sbjct: 74 EAHRLRTRERNREDARERLVSLIRQA 99
>gi|114777943|ref|ZP_01452857.1| Protein chain release factor B [Mariprofundus ferrooxydans PV-1]
gi|114551730|gb|EAU54282.1| Protein chain release factor B [Mariprofundus ferrooxydans PV-1]
Length = 146
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S +E++I R+ G GGQ+VN V++ + +RF ++A++ L + K++L+ R++K
Sbjct: 17 VSIADDEIEINAIRAQGAGGQNVNKVASAIHLRFDIHASS-LPDAYKQRLLARQDQRISK 75
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+G +IIK+ + RSQ+ N ADA+T L+ +I A
Sbjct: 76 EGIIIIKAQQFRSQEQNRADALTRLQELIKAA 107
>gi|86751284|ref|YP_487780.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodopseudomonas
palustris HaA2]
gi|86574312|gb|ABD08869.1| Class I peptide chain release factor [Rhodopseudomonas palustris
HaA2]
Length = 139
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I++ R+SGPGGQ+VN +ST +RF L ED +LI L R+ K+G ++
Sbjct: 13 DDIEISFVRASGPGGQNVNKLSTAAQLRFDTTKI-ALPEDAALRLINLAGQRMTKEGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
I + R R+Q+ N ADA+ L ++ A +P P+
Sbjct: 72 IHAQRFRTQERNKADAIDRLLELLRAAMVRPIPR 105
>gi|399041276|ref|ZP_10736383.1| protein chain release factor B [Rhizobium sp. CF122]
gi|398060386|gb|EJL52211.1| protein chain release factor B [Rhizobium sp. CF122]
Length = 144
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + LNE VK ++L RL+
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTSVQLFFNIPNSPSLNERVKVNAVKLAGKRLS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+G L+I++ R RSQ N DA L+ +I +AA
Sbjct: 71 KEGVLMIEASRFRSQDRNREDARERLKELILEAA 104
>gi|406938558|gb|EKD71764.1| class I peptide chain release factor [uncultured bacterium]
Length = 141
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I + S GPGGQ+VN ++T V +RF + L E ++++L+ + NRL K G +II
Sbjct: 14 EINIEFITSPGPGGQNVNKLATAVLLRFDALHSPSLPEKMRERLLTMADNRLTKHGEIII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
K+ R R+Q+ N DA+ L+ ++ K A P+I + T
Sbjct: 74 KAFRFRTQERNKQDALQRLKELL-KRATVIPKIRKKT 109
>gi|167582401|ref|ZP_02375275.1| hypothetical protein BthaT_29945 [Burkholderia thailandensis TXDOH]
Length = 134
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+++ +E+++T R+ G GGQ+VN VS+ + +RF + A++ L +DVK +L+ R+
Sbjct: 4 RYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPDDVKARLLTRADQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
++G ++IK+ R+Q+ N A A+ L +I A
Sbjct: 63 REGIVVIKAQEYRTQEKNRAAALARLDTLIRSAG 96
>gi|302877867|ref|YP_003846431.1| class I peptide chain release factor [Gallionella capsiferriformans
ES-2]
gi|302580656|gb|ADL54667.1| Class I peptide chain release factor [Gallionella capsiferriformans
ES-2]
Length = 136
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++ R+ G GGQ+VN VS+ + +RF +NA++ L E+ K++L +L R++ D +I+
Sbjct: 13 EIELNAIRAQGAGGQNVNKVSSAIHLRFDINASS-LPEEYKEKLRQLADRRISNDDVIIL 71
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ R RSQ N ADAM L+ +I A
Sbjct: 72 KAQRFRSQDKNRADAMERLQALIISAG 98
>gi|298157414|gb|EFH98497.1| predicted peptidyl-tRNA hydrolase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 137
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T + G GGQ+VN VS+ V +RF +NA++ L K++L+ L+ +R+ +DG +++
Sbjct: 14 EIELTAICAQGAGGQNVNKVSSAVHLRFDINASS-LPPFYKERLLALSDSRITRDGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I AAK
Sbjct: 73 KAQQYRTQEQNRADALLRLSELIVNAAK 100
>gi|315122981|ref|YP_004064987.1| hypothetical protein PSM_B0038 [Pseudoalteromonas sp. SM9913]
gi|315016741|gb|ADT70078.1| hypothetical protein PSM_B0038 [Pseudoalteromonas sp. SM9913]
Length = 137
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ RS G GGQ+VN V++ + +RF +N + L + K++L+ L +R+ K+G LII
Sbjct: 14 EVELSAIRSQGAGGQNVNKVASAIHLRFDINRSK-LPDFYKERLLALKDSRITKEGVLII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q+LN DA+ L+++I A K
Sbjct: 73 KAQSHRTQELNREDALKRLKDLILSATK 100
>gi|187478509|ref|YP_786533.1| peptidyl-tRNA hydrolase domain-containing protein [Bordetella avium
197N]
gi|115423095|emb|CAJ49626.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 138
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 6/94 (6%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
Y+ E ELD R+ G GGQ+VN VS+ V +RF V A++ L + VK+ ++ L +RL+K+
Sbjct: 9 YLDERELDFGMIRAQGAGGQNVNKVSSAVHLRFDVPASS-LPDAVKQAVLALPDSRLSKE 67
Query: 141 GYLIIKSDRTRSQQLNLADA----MTTLRNMIWK 170
G LIIK+ RSQ N ADA + LR ++K
Sbjct: 68 GVLIIKAQAFRSQDKNRADAIERLLAVLRQALFK 101
>gi|53718920|ref|YP_107906.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
pseudomallei K96243]
gi|53724195|ref|YP_103382.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
mallei ATCC 23344]
gi|67639473|ref|ZP_00438327.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei GB8
horse 4]
gi|121600896|ref|YP_992526.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
mallei SAVP1]
gi|124383604|ref|YP_001026673.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
mallei NCTC 10229]
gi|126438566|ref|YP_001058431.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
pseudomallei 668]
gi|126449259|ref|YP_001080044.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
mallei NCTC 10247]
gi|126454932|ref|YP_001065665.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
pseudomallei 1106a]
gi|134283782|ref|ZP_01770479.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
305]
gi|167002474|ref|ZP_02268264.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei PRL-20]
gi|167718952|ref|ZP_02402188.1| hypothetical protein BpseD_08004 [Burkholderia pseudomallei DM98]
gi|167737955|ref|ZP_02410729.1| hypothetical protein Bpse14_07802 [Burkholderia pseudomallei 14]
gi|167815134|ref|ZP_02446814.1| hypothetical protein Bpse9_08321 [Burkholderia pseudomallei 91]
gi|167823553|ref|ZP_02455024.1| hypothetical protein Bpseu9_07732 [Burkholderia pseudomallei 9]
gi|167845102|ref|ZP_02470610.1| hypothetical protein BpseB_07403 [Burkholderia pseudomallei B7210]
gi|167893647|ref|ZP_02481049.1| hypothetical protein Bpse7_07801 [Burkholderia pseudomallei 7894]
gi|167902092|ref|ZP_02489297.1| hypothetical protein BpseN_07429 [Burkholderia pseudomallei NCTC
13177]
gi|167910331|ref|ZP_02497422.1| hypothetical protein Bpse112_07545 [Burkholderia pseudomallei 112]
gi|167918359|ref|ZP_02505450.1| hypothetical protein BpseBC_07372 [Burkholderia pseudomallei
BCC215]
gi|217423397|ref|ZP_03454898.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
576]
gi|226198598|ref|ZP_03794164.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
Pakistan 9]
gi|242314858|ref|ZP_04813874.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1106b]
gi|254178498|ref|ZP_04885153.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei ATCC
10399]
gi|254180282|ref|ZP_04886881.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1655]
gi|254188294|ref|ZP_04894805.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254198013|ref|ZP_04904435.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
S13]
gi|254200340|ref|ZP_04906706.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei FMH]
gi|254209417|ref|ZP_04915763.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei JHU]
gi|254298120|ref|ZP_04965573.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
406e]
gi|254358918|ref|ZP_04975191.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei
2002721280]
gi|386862317|ref|YP_006275266.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
pseudomallei 1026b]
gi|403518093|ref|YP_006652226.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
pseudomallei BPC006]
gi|418389830|ref|ZP_12967659.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
354a]
gi|418538761|ref|ZP_13104363.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1026a]
gi|418541451|ref|ZP_13106932.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1258a]
gi|418547695|ref|ZP_13112836.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1258b]
gi|418553871|ref|ZP_13118677.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
354e]
gi|52209334|emb|CAH35279.1| putative release factor [Burkholderia pseudomallei K96243]
gi|52427618|gb|AAU48211.1| peptidyl-tRNA hydrolase, putative [Burkholderia mallei ATCC 23344]
gi|121229706|gb|ABM52224.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei SAVP1]
gi|124291624|gb|ABN00893.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei NCTC
10229]
gi|126218059|gb|ABN81565.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
668]
gi|126228574|gb|ABN92114.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1106a]
gi|126242129|gb|ABO05222.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei NCTC
10247]
gi|134244770|gb|EBA44867.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
305]
gi|147749936|gb|EDK57010.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei FMH]
gi|147750190|gb|EDK57261.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei JHU]
gi|148028045|gb|EDK86066.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei
2002721280]
gi|157806897|gb|EDO84067.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
406e]
gi|157935973|gb|EDO91643.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
Pasteur 52237]
gi|160699537|gb|EDP89507.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei ATCC
10399]
gi|169654754|gb|EDS87447.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
S13]
gi|184210822|gb|EDU07865.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1655]
gi|217393255|gb|EEC33276.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
576]
gi|225929341|gb|EEH25362.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
Pakistan 9]
gi|238520021|gb|EEP83485.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei GB8
horse 4]
gi|242138097|gb|EES24499.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1106b]
gi|243061886|gb|EES44072.1| peptidyl-tRNA hydrolase domain protein [Burkholderia mallei PRL-20]
gi|385347046|gb|EIF53716.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1026a]
gi|385358012|gb|EIF64042.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1258a]
gi|385360089|gb|EIF66030.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1258b]
gi|385371075|gb|EIF76283.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
354e]
gi|385375979|gb|EIF80704.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
354a]
gi|385659445|gb|AFI66868.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1026b]
gi|403073736|gb|AFR15316.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
BPC006]
Length = 134
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+++ +E+++T R+ G GGQ+VN VS+ + +RF + A++ L +DVK +L R+
Sbjct: 4 RYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPDDVKARLFARADQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
++G ++IK+ R+Q+ N A A+ L +I A
Sbjct: 63 REGVIVIKAQEYRTQEKNRAAALARLDTLIRSAG 96
>gi|85717172|ref|ZP_01048130.1| hypothetical protein NB311A_14622 [Nitrobacter sp. Nb-311A]
gi|85696005|gb|EAQ33905.1| hypothetical protein NB311A_14622 [Nitrobacter sp. Nb-311A]
Length = 139
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++I++ R+SGPGGQ+VN +ST +R+ L DV +L +L R+ +DG ++I
Sbjct: 14 DVEISFVRASGPGGQNVNKLSTAAQLRYDTRRL-ALAPDVAARLAQLAGQRMTRDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
+ R R+Q+ N ADA L ++ +AA +P P+
Sbjct: 73 HAQRFRTQERNRADATDRLIELLRQAAIRPTPR 105
>gi|365969104|ref|YP_004950665.1| protein YaeJ [Enterobacter cloacae EcWSU1]
gi|365748017|gb|AEW72244.1| YaeJ [Enterobacter cloacae EcWSU1]
Length = 145
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ + + + DG ++I
Sbjct: 19 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKESLLAASHHLITSDGVIVI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +MI
Sbjct: 78 KAQEYRSQELNREAAIARLVSMI 100
>gi|313682086|ref|YP_004059824.1| class i peptide chain release factor [Sulfuricurvum kujiense DSM
16994]
gi|313154946|gb|ADR33624.1| Class I peptide chain release factor [Sulfuricurvum kujiense DSM
16994]
Length = 140
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++IT RS G GGQ+VN VST + +RF +NA+ L + K++L+E+ +R+ K+G + I
Sbjct: 14 EIEITAIRSQGAGGQNVNKVSTAIHLRFDINAST-LPDFYKERLLEITDHRITKEGIINI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
KS +RSQ+ N A+ L+ +I
Sbjct: 73 KSQASRSQEENKEAALERLKELI 95
>gi|399994323|ref|YP_006574563.1| peptidyl-tRNA hydrolase-like protein [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398658878|gb|AFO92844.1| peptidyl-tRNA hydrolase-like protein [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 139
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L VK +L L R KDG +I+
Sbjct: 14 ELTESFMRASGPGGQNVNKVSSAVELRFEAARSPALTPAVKSRLKRLAGRRWTKDGAIIL 73
Query: 146 KSDRTRSQQLN 156
+ D TRSQQ N
Sbjct: 74 QCDETRSQQRN 84
>gi|148653179|ref|YP_001280272.1| class I peptide chain release factor [Psychrobacter sp. PRwf-1]
gi|148572263|gb|ABQ94322.1| Class I peptide chain release factor [Psychrobacter sp. PRwf-1]
Length = 138
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI + ++T+ E+++ R+ G GGQ+VN VS+ + +RF + A+ L++ VK++L++
Sbjct: 2 IVINKHIHLTDKEVELHPMRAQGAGGQNVNKVSSAIHLRFDI-VASSLSDAVKQRLLDSK 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+R++K+G LIIK+ + R+Q+ N DA+ L++ I K
Sbjct: 61 DSRISKEGVLIIKAQQHRTQERNKLDAIERLKDFIKKG 98
>gi|260574267|ref|ZP_05842272.1| Class I peptide chain release factor [Rhodobacter sp. SW2]
gi|259023733|gb|EEW27024.1| Class I peptide chain release factor [Rhodobacter sp. SW2]
Length = 140
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++SRSSGPGGQ+VN V T V++RF+ + L VK +L L R +G ++I
Sbjct: 14 ELSESFSRSSGPGGQNVNKVETAVELRFEAERSPNLTPAVKARLKRLAGRRWTNEGAIVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+++ TRSQ N A L MI +AA AP+
Sbjct: 74 RAEETRSQARNRELAEARLVEMI-QAALVAPK 104
>gi|410610763|ref|ZP_11321871.1| ribosome-associated protein [Glaciecola psychrophila 170]
gi|410169720|dbj|GAC35760.1| ribosome-associated protein [Glaciecola psychrophila 170]
Length = 136
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 77 IPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNR 136
IP + +D++ R+ G GGQ+VN VS+ + +RF + AA + E VK++L+ R
Sbjct: 4 IPNIESLMPAVDLSAMRAQGAGGQNVNKVSSAIHLRFDIQAA-AIPEYVKQKLLSGKDKR 62
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+ ++G LIIK+ R+Q++N DA+ L ++ +A K
Sbjct: 63 ITQEGILIIKAQSHRTQEVNKQDAIERLAEVLVEAGK 99
>gi|410465783|ref|ZP_11318989.1| protein chain release factor B [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981175|gb|EKO37780.1| protein chain release factor B [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 140
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V R S EE+ +RS GPGGQHVN+ S+KV + F ++A+ L E K ++ E
Sbjct: 6 VTSRVSIPLEEITFIAARSGGPGGQHVNTTSSKVTLLFDLDASPSLAEADKARVRETLAG 65
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+ KDG L + S +RSQ N A+ ++ +A P P
Sbjct: 66 RIGKDGVLRVVSQTSRSQFANKEIALERFAALLREALTPRP 106
>gi|374365909|ref|ZP_09623995.1| hypothetical protein OR16_07821 [Cupriavidus basilensis OR16]
gi|373102563|gb|EHP43598.1| hypothetical protein OR16_07821 [Cupriavidus basilensis OR16]
Length = 134
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
++P + E +IT R+ G GGQ++N VS V +RF V A++ L E K +L++L+ +
Sbjct: 1 MLPDITIPHTEYEITAIRAQGAGGQNINKVSNAVHLRFDVRASS-LEEGHKARLLQLHDH 59
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
R+ +DG ++IK+ + RS ++N +A+ L +++ A
Sbjct: 60 RITRDGVVVIKAQQHRSLEMNREEAVQRLHDLVRSVA 96
>gi|312962710|ref|ZP_07777199.1| hypothetical protein PFWH6_4632 [Pseudomonas fluorescens WH6]
gi|311283085|gb|EFQ61677.1| hypothetical protein PFWH6_4632 [Pseudomonas fluorescens WH6]
Length = 138
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L + K++L+ L +R+ DG LI+
Sbjct: 15 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPDFYKERLLALRDSRITSDGVLIL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 74 KAQQYRTQEQNRADALERLVELILSATK 101
>gi|21674794|ref|NP_662859.1| peptidyl-tRNA hydrolase [Chlorobium tepidum TLS]
gi|21648011|gb|AAM73201.1| prokaryotic and mitochondrial release factors family protein
[Chlorobium tepidum TLS]
Length = 139
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++IT R+ G GGQ+VN V T V +RF + AA++L ++K +L++ R+ ++G ++I
Sbjct: 14 EIEITTMRAQGAGGQNVNKVETAVHLRFDI-AASFLPPELKDRLMQQRDRRITREGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
++ R R+Q+ N DA+ + ++ KA
Sbjct: 73 RAQRYRTQEKNRQDAIERFQGILTKA 98
>gi|313674471|ref|YP_004052467.1| class i peptide chain release factor [Marivirga tractuosa DSM 4126]
gi|312941169|gb|ADR20359.1| Class I peptide chain release factor [Marivirga tractuosa DSM 4126]
Length = 138
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
+ S I +E+++T +RS G GGQHVN V TKV +RF ++A+ L E+ K+ + + +N+L
Sbjct: 7 QLSKIKKEIELTTARSGGSGGQHVNKVETKVILRFNIDASQLLTENEKETIRKTLENKLT 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
K G LII ++ SQ N A + + KA
Sbjct: 67 KSGDLIITAENHSSQIKNKELAYKKMERTLSKA 99
>gi|145219127|ref|YP_001129836.1| class I peptide chain release factor [Chlorobium phaeovibrioides
DSM 265]
gi|145205291|gb|ABP36334.1| Class I peptide chain release factor [Chlorobium phaeovibrioides
DSM 265]
Length = 139
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R S +E+ ++ RSSG GGQ+VN V T V + F + AA+ L E VK +L+ + R++
Sbjct: 8 RVSVSPDEVVFSFMRSSGAGGQNVNKVETAVHLSFDI-AASSLPERVKTRLLAGSDRRIS 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
K G L IK+ R RSQ+ N DA L++++ AA
Sbjct: 67 KGGVLGIKAQRFRSQEKNREDAFFRLQSLVDAAA 100
>gi|384261808|ref|YP_005416994.1| class I peptide chain release factor [Rhodospirillum photometricum
DSM 122]
gi|378402908|emb|CCG08024.1| Class I peptide chain release factor [Rhodospirillum photometricum
DSM 122]
Length = 140
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+ + RSSGPGGQ+VN V+T V +RF A+ L E VK++L L +RL +DG L+I
Sbjct: 14 ELEERFIRSSGPGGQNVNKVATAVQLRFNALASPNLPERVKERLKALAGSRLTQDGVLVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ R+Q+ N +A+ L ++ A+
Sbjct: 74 TAQTWRTQEANRREALERLLTLLRAAS 100
>gi|53802604|ref|YP_112667.1| peptidyl-tRNA hydrolase domain-containing protein [Methylococcus
capsulatus str. Bath]
gi|53756365|gb|AAU90656.1| peptidyl-tRNA hydrolase domain protein [Methylococcus capsulatus
str. Bath]
Length = 139
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I + RS G GGQ+VN ++T +RF + AA+ L E K +L++ R+ +G ++I
Sbjct: 16 EIEIGFVRSGGAGGQNVNKLATAAHLRFDI-AASSLPETCKTRLLDHRDRRMTAEGIIVI 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ R +Q+ N DA+ LR +I +A
Sbjct: 75 KAQRFGTQEKNREDALARLRGLILQA 100
>gi|283783979|ref|YP_003363844.1| peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
gi|282947433|emb|CBG86979.1| putative peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
Length = 139
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I E EL+IT R+ G GGQHVN ST + +RF + A+ L E K++L+ +
Sbjct: 2 IVISRTVSIAEDELEITAIRAQGAGGQHVNKASTAIHLRFDIRASG-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG +IIK+ RSQ LN A+ L +I
Sbjct: 61 HHLISPDGIIIIKAQEYRSQTLNREAALARLVAVI 95
>gi|260428149|ref|ZP_05782128.1| class I peptide chain release factor [Citreicella sp. SE45]
gi|260422641|gb|EEX15892.1| class I peptide chain release factor [Citreicella sp. SE45]
Length = 140
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R S EL + R+SGPGGQ+VN VST V++RF+ + L VK +L +L R
Sbjct: 7 RISIEDWELTEQFMRASGPGGQNVNKVSTAVELRFEAERSPNLPPAVKTRLRKLAGRRWT 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
KDG L+++ D TRSQ N A L +I KA
Sbjct: 67 KDGALVLQVDDTRSQARNREIARERLAELIGKA 99
>gi|420378519|ref|ZP_14878023.1| putative-tRNA hydrolase domain protein [Shigella dysenteriae
225-75]
gi|391307460|gb|EIQ65193.1| putative-tRNA hydrolase domain protein [Shigella dysenteriae
225-75]
Length = 120
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|302794340|ref|XP_002978934.1| hypothetical protein SELMODRAFT_109917 [Selaginella moellendorffii]
gi|300153252|gb|EFJ19891.1| hypothetical protein SELMODRAFT_109917 [Selaginella moellendorffii]
Length = 117
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 18/93 (19%)
Query: 85 EELDITYSRSSGPGGQHVN------------------SVSTKVDIRFKVNAANWLNEDVK 126
+ + ++++RS G GGQ+VN +V+TKVD+RF V A+WL V+
Sbjct: 1 DHVTVSFARSGGAGGQNVNKGVIFSVFGTLVIGISSLTVNTKVDMRFNVMNAHWLPLQVR 60
Query: 127 KQLIELNKNRLNKDGYLIIKSDRTRSQQLNLAD 159
+L++ KNR+N DG L+I S RTR+Q D
Sbjct: 61 NKLLQTEKNRINSDGELVISSTRTRTQNAAAED 93
>gi|218677418|ref|ZP_03525315.1| hypothetical protein RetlC8_00615 [Rhizobium etli CIAT 894]
Length = 139
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + LN+ VK ++L RL+
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFNIPNSPSLNDRVKANAVKLAGRRLS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
KDG L+I++ R RSQ N DA L+ +I AA
Sbjct: 71 KDGVLMIEASRFRSQDRNREDARERLKELILDAA 104
>gi|254422712|ref|ZP_05036430.1| hypothetical protein S7335_2864 [Synechococcus sp. PCC 7335]
gi|196190201|gb|EDX85165.1| hypothetical protein S7335_2864 [Synechococcus sp. PCC 7335]
Length = 132
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ I+ RS G GGQ+VN V+T V +RF V A++ L + K++L+ L RL KDG ++I
Sbjct: 8 EIAISAVRSQGAGGQNVNKVATAVHLRFDVGASS-LPDFYKRRLLALRDKRLTKDGVIVI 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
KS R+Q N +A+ L+ M+ A
Sbjct: 67 KSQEHRTQARNKEEALMRLQQMVKSVA 93
>gi|87307849|ref|ZP_01089992.1| peptidyl-tRNA hydrolase [Blastopirellula marina DSM 3645]
gi|87289463|gb|EAQ81354.1| peptidyl-tRNA hydrolase [Blastopirellula marina DSM 3645]
Length = 143
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL T+SRSSGPGGQ+VN V++K +R+ + + +++ VK++L R+NK+G +II
Sbjct: 16 ELKFTFSRSSGPGGQNVNKVNSKAMLRWAFDQSEHIDDRVKERLRTRWGGRINKNGEIII 75
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
D +R Q+ N+ + LR ++ +A
Sbjct: 76 SDDNSRDQRANIDSCLEKLRVILLDSA 102
>gi|91203284|emb|CAJ72923.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 137
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+ + R+ G GGQHVN V+T V +RF +NA++ L + K++L+ L+ R++ +G ++
Sbjct: 13 DEISMHPIRAQGAGGQHVNKVATAVQLRFDINASS-LPDFYKERLLSLSDRRISGEGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
IK+ + RSQ N DA+ LR+ I A
Sbjct: 72 IKAQKYRSQDKNKEDALNRLRDFIKSA 98
>gi|422830357|ref|ZP_16878516.1| hypothetical protein ESNG_03021 [Escherichia coli B093]
gi|371605349|gb|EHN93966.1| hypothetical protein ESNG_03021 [Escherichia coli B093]
Length = 140
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|357031348|ref|ZP_09093292.1| peptidyl-tRNA hydrolase domain protein [Gluconobacter morbifer
G707]
gi|356416042|gb|EHH69685.1| peptidyl-tRNA hydrolase domain protein [Gluconobacter morbifer
G707]
Length = 140
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V+P FS E+L ITY +SGPGGQ+VN V+T +RF A L + V+ +L+EL +
Sbjct: 5 VLPGFSLHEEDLKITYILASGPGGQNVNKVATAAQLRFDSAACTQLPDRVRTRLLELAGS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
R ++G +++ R R++Q N D + L +I +AA +PA +++
Sbjct: 65 RATRNGEIVMTGRRFRTRQRNREDVIERLVALIRQAAHRPAFRVA 109
>gi|422768447|ref|ZP_16822172.1| RF-1 domain-containing protein [Escherichia coli E1520]
gi|323935032|gb|EGB31405.1| RF-1 domain-containing protein [Escherichia coli E1520]
Length = 140
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKEHLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|395650871|ref|ZP_10438721.1| hypothetical protein Pext1s1_19929 [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 137
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ +G L++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSEGVLVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELILSATK 100
>gi|421589907|ref|ZP_16034984.1| hypothetical protein RCCGEPOP_13572 [Rhizobium sp. Pop5]
gi|403705041|gb|EJZ20745.1| hypothetical protein RCCGEPOP_13572 [Rhizobium sp. Pop5]
Length = 145
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LNE VK ++L R++K+G L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIPNSPSLNERVKANAVKLAGRRMSKEGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARERLKELILEAA 104
>gi|192359539|ref|YP_001982672.1| peptidyl-tRNA hydrolase domain-containing protein [Cellvibrio
japonicus Ueda107]
gi|190685704|gb|ACE83382.1| peptidyl-tRNA hydrolase domain protein [Cellvibrio japonicus
Ueda107]
Length = 139
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + ++ L++ K +L+ L+ R+ ++G LII
Sbjct: 15 EIELTAMRAQGAGGQNVNKVSSAIHLRFDILRSS-LSDIHKARLMALDDKRITREGVLII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ R R+Q N DA+ L+ ++ A KP
Sbjct: 74 KAQRYRTQDQNREDALQRLQELVAGAIKP 102
>gi|239909069|ref|YP_002955811.1| hypothetical protein DMR_44340 [Desulfovibrio magneticus RS-1]
gi|239798936|dbj|BAH77925.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 150
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V R S E+D +RS GPGGQHVN+ S+KV + F ++A+ L E K ++ E
Sbjct: 16 VTSRVSIPLAEIDYIAARSGGPGGQHVNTTSSKVTLLFDLDASPSLTEADKARIREALTG 75
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+ KDG L + S +RSQ N A+ ++ +A P P
Sbjct: 76 RIGKDGVLRVVSQTSRSQFANKEIALERFAALLREALTPRP 116
>gi|237811675|ref|YP_002896126.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
MSHR346]
gi|237504180|gb|ACQ96498.1| class I peptide chain release factor [Burkholderia pseudomallei
MSHR346]
Length = 134
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+++ +E+++T R+ G GGQ+VN VS+ + +RF + A++ L +DVK +L R+
Sbjct: 4 RYAFSQDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPDDVKARLFARADQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
++G ++IK+ R+Q+ N A A+ L +I A
Sbjct: 63 REGVIVIKAQEYRTQEKNRAVALARLDTLIRSAG 96
>gi|420301596|ref|ZP_14803631.1| hypothetical protein ECTW10119_0580 [Escherichia coli TW10119]
gi|444972841|ref|ZP_21290145.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1805]
gi|390820189|gb|EIO86495.1| hypothetical protein ECTW10119_0580 [Escherichia coli TW10119]
gi|444610078|gb|ELV84514.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1805]
Length = 136
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|366159363|ref|ZP_09459225.1| hypothetical protein ETW09_10500 [Escherichia sp. TW09308]
gi|432375117|ref|ZP_19618140.1| ribosome-associated protein [Escherichia coli KTE11]
gi|430892375|gb|ELC14867.1| ribosome-associated protein [Escherichia coli KTE11]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|15799873|ref|NP_285885.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
O157:H7 str. EDL933]
gi|15829447|ref|NP_308220.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
O157:H7 str. Sakai]
gi|168752175|ref|ZP_02777197.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4113]
gi|168758716|ref|ZP_02783723.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4401]
gi|168764945|ref|ZP_02789952.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4501]
gi|168769960|ref|ZP_02794967.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4486]
gi|168777700|ref|ZP_02802707.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4196]
gi|168782085|ref|ZP_02807092.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4076]
gi|168789302|ref|ZP_02814309.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC869]
gi|168802463|ref|ZP_02827470.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC508]
gi|195939888|ref|ZP_03085270.1| hypothetical protein EscherichcoliO157_26391 [Escherichia coli
O157:H7 str. EC4024]
gi|208807788|ref|ZP_03250125.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4206]
gi|208814264|ref|ZP_03255593.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4045]
gi|208820681|ref|ZP_03261001.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4042]
gi|209397979|ref|YP_002268800.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
O157:H7 str. EC4115]
gi|217326506|ref|ZP_03442590.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. TW14588]
gi|254791324|ref|YP_003076161.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
O157:H7 str. TW14359]
gi|261226946|ref|ZP_05941227.1| hypothetical protein EscherichiacoliO157_20487 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255350|ref|ZP_05947883.1| hypothetical protein EscherichiacoliO157EcO_05914 [Escherichia coli
O157:H7 str. FRIK966]
gi|387880750|ref|YP_006311052.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
Xuzhou21]
gi|416314024|ref|ZP_11658482.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. 1044]
gi|416318926|ref|ZP_11661478.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC1212]
gi|416325815|ref|ZP_11666139.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. 1125]
gi|416777842|ref|ZP_11875482.1| hypothetical protein ECO5101_12093 [Escherichia coli O157:H7 str.
G5101]
gi|419048496|ref|ZP_13595421.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3A]
gi|419048768|ref|ZP_13595689.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3B]
gi|419054844|ref|ZP_13601705.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3C]
gi|419060399|ref|ZP_13607187.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3D]
gi|419066231|ref|ZP_13612921.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3E]
gi|419078466|ref|ZP_13623954.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4A]
gi|419084115|ref|ZP_13629534.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4B]
gi|419090165|ref|ZP_13635487.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4C]
gi|419101174|ref|ZP_13646355.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4D]
gi|419101753|ref|ZP_13646922.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4E]
gi|419112804|ref|ZP_13657842.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4F]
gi|420267430|ref|ZP_14769841.1| hypothetical protein ECPA22_0390 [Escherichia coli PA22]
gi|420273165|ref|ZP_14775500.1| hypothetical protein ECPA40_0396 [Escherichia coli PA40]
gi|420284694|ref|ZP_14786914.1| hypothetical protein ECTW10246_0577 [Escherichia coli TW10246]
gi|420290215|ref|ZP_14792384.1| hypothetical protein ECTW11039_0330 [Escherichia coli TW11039]
gi|420295936|ref|ZP_14798034.1| hypothetical protein ECTW09109_0391 [Escherichia coli TW09109]
gi|420307546|ref|ZP_14809522.1| hypothetical protein ECEC1738_0391 [Escherichia coli EC1738]
gi|420313074|ref|ZP_14814989.1| hypothetical protein ECEC1734_0323 [Escherichia coli EC1734]
gi|421810340|ref|ZP_16246160.1| RF-1 domain-containing protein [Escherichia coli 8.0416]
gi|421816412|ref|ZP_16251985.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 10.0821]
gi|421821806|ref|ZP_16257251.1| hypothetical protein ECFRIK920_0237 [Escherichia coli FRIK920]
gi|421828558|ref|ZP_16263890.1| hypothetical protein ECPA7_0699 [Escherichia coli PA7]
gi|423652558|ref|ZP_17627962.1| hypothetical protein ECPA31_0175 [Escherichia coli PA31]
gi|424074955|ref|ZP_17812347.1| hypothetical protein ECFDA505_0174 [Escherichia coli FDA505]
gi|424081204|ref|ZP_17818111.1| hypothetical protein ECFDA517_0284 [Escherichia coli FDA517]
gi|424087880|ref|ZP_17824182.1| hypothetical protein ECFRIK1996_0284 [Escherichia coli FRIK1996]
gi|424094089|ref|ZP_17829902.1| hypothetical protein ECFRIK1985_0177 [Escherichia coli FRIK1985]
gi|424113302|ref|ZP_17847501.1| hypothetical protein ECPA3_0288 [Escherichia coli PA3]
gi|424119430|ref|ZP_17853189.1| hypothetical protein ECPA5_0174 [Escherichia coli PA5]
gi|424125647|ref|ZP_17858889.1| hypothetical protein ECPA9_0327 [Escherichia coli PA9]
gi|424131654|ref|ZP_17864510.1| hypothetical protein ECPA10_0176 [Escherichia coli PA10]
gi|424138267|ref|ZP_17870609.1| hypothetical protein ECPA14_0176 [Escherichia coli PA14]
gi|424144722|ref|ZP_17876530.1| hypothetical protein ECPA15_0328 [Escherichia coli PA15]
gi|424150867|ref|ZP_17882173.1| hypothetical protein ECPA24_0175 [Escherichia coli PA24]
gi|424260219|ref|ZP_17893155.1| hypothetical protein ECPA25_5744 [Escherichia coli PA25]
gi|424260905|ref|ZP_17893491.1| hypothetical protein ECPA28_0328 [Escherichia coli PA28]
gi|424417142|ref|ZP_17899262.1| hypothetical protein ECPA32_0200 [Escherichia coli PA32]
gi|424453266|ref|ZP_17904853.1| hypothetical protein ECPA33_0175 [Escherichia coli PA33]
gi|424459544|ref|ZP_17910552.1| hypothetical protein ECPA39_0200 [Escherichia coli PA39]
gi|424466006|ref|ZP_17916243.1| hypothetical protein ECPA41_0176 [Escherichia coli PA41]
gi|424472606|ref|ZP_17922318.1| hypothetical protein ECPA42_0326 [Escherichia coli PA42]
gi|424478577|ref|ZP_17927866.1| hypothetical protein ECTW07945_0320 [Escherichia coli TW07945]
gi|424484602|ref|ZP_17933521.1| hypothetical protein ECTW09098_0271 [Escherichia coli TW09098]
gi|424490697|ref|ZP_17939168.1| hypothetical protein ECTW09195_0197 [Escherichia coli TW09195]
gi|424497817|ref|ZP_17945140.1| hypothetical protein ECEC4203_0177 [Escherichia coli EC4203]
gi|424504063|ref|ZP_17950888.1| hypothetical protein ECEC4196_0177 [Escherichia coli EC4196]
gi|424510304|ref|ZP_17956607.1| hypothetical protein ECTW14313_0177 [Escherichia coli TW14313]
gi|424517887|ref|ZP_17962361.1| hypothetical protein ECTW14301_0179 [Escherichia coli TW14301]
gi|424523713|ref|ZP_17967780.1| hypothetical protein ECEC4421_0175 [Escherichia coli EC4421]
gi|424529920|ref|ZP_17973589.1| hypothetical protein ECEC4422_0326 [Escherichia coli EC4422]
gi|424535891|ref|ZP_17979199.1| hypothetical protein ECEC4013_0395 [Escherichia coli EC4013]
gi|424541778|ref|ZP_17984663.1| hypothetical protein ECEC4402_0179 [Escherichia coli EC4402]
gi|424548103|ref|ZP_17990365.1| hypothetical protein ECEC4439_0177 [Escherichia coli EC4439]
gi|424554392|ref|ZP_17996160.1| hypothetical protein ECEC4436_0175 [Escherichia coli EC4436]
gi|424560738|ref|ZP_18002064.1| hypothetical protein ECEC4437_0284 [Escherichia coli EC4437]
gi|424572947|ref|ZP_18013418.1| hypothetical protein ECEC1845_0177 [Escherichia coli EC1845]
gi|424584774|ref|ZP_18024394.1| hypothetical protein ECEC1863_5647 [Escherichia coli EC1863]
gi|425095588|ref|ZP_18498648.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3.4870]
gi|425101672|ref|ZP_18504360.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 5.2239]
gi|425107530|ref|ZP_18509815.1| RF-1 domain-containing protein [Escherichia coli 6.0172]
gi|425123342|ref|ZP_18524957.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 8.0586]
gi|425129367|ref|ZP_18530510.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 8.2524]
gi|425135710|ref|ZP_18536479.1| RF-1 domain-containing protein [Escherichia coli 10.0833]
gi|425147933|ref|ZP_18547870.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 88.0221]
gi|425153547|ref|ZP_18553134.1| hypothetical protein ECPA34_0329 [Escherichia coli PA34]
gi|425160009|ref|ZP_18559219.1| hypothetical protein ECFDA506_0651 [Escherichia coli FDA506]
gi|425165524|ref|ZP_18564367.1| hypothetical protein ECFDA507_0185 [Escherichia coli FDA507]
gi|425177611|ref|ZP_18575698.1| hypothetical protein ECFRIK1999_0314 [Escherichia coli FRIK1999]
gi|425183837|ref|ZP_18581497.1| hypothetical protein ECFRIK1997_0331 [Escherichia coli FRIK1997]
gi|425190569|ref|ZP_18587728.1| hypothetical protein ECNE1487_0446 [Escherichia coli NE1487]
gi|425196867|ref|ZP_18593559.1| hypothetical protein ECNE037_0330 [Escherichia coli NE037]
gi|425203563|ref|ZP_18599725.1| hypothetical protein ECFRIK2001_0572 [Escherichia coli FRIK2001]
gi|425209338|ref|ZP_18605110.1| RF-1 domain-containing protein [Escherichia coli PA4]
gi|425215377|ref|ZP_18610731.1| hypothetical protein ECPA23_0139 [Escherichia coli PA23]
gi|425221943|ref|ZP_18616838.1| hypothetical protein ECPA49_0328 [Escherichia coli PA49]
gi|425228195|ref|ZP_18622627.1| hypothetical protein ECPA45_0326 [Escherichia coli PA45]
gi|425234494|ref|ZP_18628488.1| hypothetical protein ECTT12B_0328 [Escherichia coli TT12B]
gi|425240470|ref|ZP_18634139.1| hypothetical protein ECMA6_0442 [Escherichia coli MA6]
gi|425252339|ref|ZP_18645258.1| hypothetical protein ECCB7326_0180 [Escherichia coli CB7326]
gi|425258673|ref|ZP_18651078.1| hypothetical protein ECEC96038_0129 [Escherichia coli EC96038]
gi|425292171|ref|ZP_18682809.1| hypothetical protein ECPA38_0180 [Escherichia coli PA38]
gi|425308950|ref|ZP_18698462.1| hypothetical protein ECEC1735_0285 [Escherichia coli EC1735]
gi|425314877|ref|ZP_18703995.1| hypothetical protein ECEC1736_0175 [Escherichia coli EC1736]
gi|425320954|ref|ZP_18709674.1| hypothetical protein ECEC1737_0176 [Escherichia coli EC1737]
gi|425327114|ref|ZP_18715386.1| hypothetical protein ECEC1846_0174 [Escherichia coli EC1846]
gi|425333303|ref|ZP_18721072.1| hypothetical protein ECEC1847_0175 [Escherichia coli EC1847]
gi|425339723|ref|ZP_18727004.1| hypothetical protein ECEC1848_0391 [Escherichia coli EC1848]
gi|425345600|ref|ZP_18732448.1| hypothetical protein ECEC1849_0175 [Escherichia coli EC1849]
gi|425351817|ref|ZP_18738238.1| hypothetical protein ECEC1850_0344 [Escherichia coli EC1850]
gi|425357801|ref|ZP_18743815.1| hypothetical protein ECEC1856_0185 [Escherichia coli EC1856]
gi|425363915|ref|ZP_18749517.1| hypothetical protein ECEC1862_0179 [Escherichia coli EC1862]
gi|425389202|ref|ZP_18772736.1| hypothetical protein ECEC1866_5801 [Escherichia coli EC1866]
gi|425389847|ref|ZP_18773342.1| hypothetical protein ECEC1868_0331 [Escherichia coli EC1868]
gi|425395970|ref|ZP_18779050.1| hypothetical protein ECEC1869_0330 [Escherichia coli EC1869]
gi|425408126|ref|ZP_18790318.1| hypothetical protein ECEC1870_5902 [Escherichia coli EC1870]
gi|425408502|ref|ZP_18790691.1| hypothetical protein ECNE098_0327 [Escherichia coli NE098]
gi|425414771|ref|ZP_18796442.1| hypothetical protein ECFRIK523_0186 [Escherichia coli FRIK523]
gi|425425920|ref|ZP_18807005.1| hypothetical protein EC01304_0232 [Escherichia coli 0.1304]
gi|428944551|ref|ZP_19017243.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 88.1467]
gi|428950725|ref|ZP_19022906.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 88.1042]
gi|428956572|ref|ZP_19028320.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 89.0511]
gi|428962939|ref|ZP_19034160.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 90.0091]
gi|428968923|ref|ZP_19039590.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 90.0039]
gi|428975507|ref|ZP_19045718.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 90.2281]
gi|428981146|ref|ZP_19050917.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 93.0055]
gi|428987527|ref|ZP_19056854.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 93.0056]
gi|428993338|ref|ZP_19062282.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 94.0618]
gi|428999427|ref|ZP_19067977.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 95.0183]
gi|429005666|ref|ZP_19073635.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 95.1288]
gi|429012028|ref|ZP_19079317.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 95.0943]
gi|429018187|ref|ZP_19085003.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0428]
gi|429023910|ref|ZP_19090361.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0427]
gi|429030213|ref|ZP_19096122.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0939]
gi|429036367|ref|ZP_19101846.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0932]
gi|429042298|ref|ZP_19107336.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0107]
gi|429048171|ref|ZP_19112839.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 97.0003]
gi|429053533|ref|ZP_19118049.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 97.1742]
gi|429059235|ref|ZP_19123405.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 97.0007]
gi|429064615|ref|ZP_19128515.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0672]
gi|429071235|ref|ZP_19134603.1| RF-1 domain-containing protein [Escherichia coli 99.0678]
gi|429076465|ref|ZP_19139695.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0713]
gi|429823677|ref|ZP_19355234.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0109]
gi|429830048|ref|ZP_19360965.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 97.0010]
gi|444922392|ref|ZP_21242156.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
09BKT078844]
gi|444928709|ref|ZP_21247881.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0814]
gi|444934108|ref|ZP_21253072.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0815]
gi|444939676|ref|ZP_21258346.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0816]
gi|444945236|ref|ZP_21263674.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0839]
gi|444950799|ref|ZP_21269043.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0848]
gi|444956273|ref|ZP_21274297.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1753]
gi|444961551|ref|ZP_21279324.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1775]
gi|444967339|ref|ZP_21284824.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1793]
gi|444978349|ref|ZP_21295357.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli ATCC
700728]
gi|444983672|ref|ZP_21300548.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA11]
gi|444988913|ref|ZP_21305664.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA19]
gi|444994226|ref|ZP_21310837.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA13]
gi|444999743|ref|ZP_21316218.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA2]
gi|445005204|ref|ZP_21321558.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA47]
gi|445010382|ref|ZP_21326588.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA48]
gi|445016145|ref|ZP_21332206.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA8]
gi|445021617|ref|ZP_21337551.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 7.1982]
gi|445026861|ref|ZP_21342650.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1781]
gi|445032334|ref|ZP_21347972.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1762]
gi|445038030|ref|ZP_21353513.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA35]
gi|445043201|ref|ZP_21358550.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3.4880]
gi|445048853|ref|ZP_21364036.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 95.0083]
gi|445054473|ref|ZP_21369435.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0670]
gi|452969963|ref|ZP_21968190.1| hypothetical protein EC4009_RS15185 [Escherichia coli O157:H7 str.
EC4009]
gi|12512922|gb|AAG54493.1|AE005195_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13359649|dbj|BAB33616.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|187767117|gb|EDU30961.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4196]
gi|188013923|gb|EDU52045.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4113]
gi|189000423|gb|EDU69409.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4076]
gi|189354517|gb|EDU72936.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4401]
gi|189361069|gb|EDU79488.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4486]
gi|189365142|gb|EDU83558.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4501]
gi|189371137|gb|EDU89553.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC869]
gi|189375543|gb|EDU93959.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC508]
gi|208727589|gb|EDZ77190.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4206]
gi|208735541|gb|EDZ84228.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4045]
gi|208740804|gb|EDZ88486.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4042]
gi|209159379|gb|ACI36812.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC4115]
gi|209748692|gb|ACI72653.1| hypothetical protein ECs0193 [Escherichia coli]
gi|209748694|gb|ACI72654.1| hypothetical protein ECs0193 [Escherichia coli]
gi|209748696|gb|ACI72655.1| hypothetical protein ECs0193 [Escherichia coli]
gi|217322727|gb|EEC31151.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. TW14588]
gi|254590724|gb|ACT70085.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|320190282|gb|EFW64932.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. EC1212]
gi|320639998|gb|EFX09583.1| hypothetical protein ECO5101_12093 [Escherichia coli O157:H7 str.
G5101]
gi|326339753|gb|EGD63561.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. 1044]
gi|326345087|gb|EGD68830.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O157:H7
str. 1125]
gi|377887517|gb|EHU51994.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3A]
gi|377902962|gb|EHU67261.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3B]
gi|377915471|gb|EHU79580.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3C]
gi|377919748|gb|EHU83786.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3D]
gi|377921292|gb|EHU85292.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3E]
gi|377934984|gb|EHU98809.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4A]
gi|377935730|gb|EHU99524.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4D]
gi|377941345|gb|EHV05087.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4B]
gi|377950872|gb|EHV14493.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4C]
gi|377951877|gb|EHV15485.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4F]
gi|377955974|gb|EHV19526.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC4E]
gi|386794208|gb|AFJ27242.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli Xuzhou21]
gi|390651566|gb|EIN29837.1| hypothetical protein ECFRIK1996_0284 [Escherichia coli FRIK1996]
gi|390654269|gb|EIN32322.1| hypothetical protein ECFDA517_0284 [Escherichia coli FDA517]
gi|390654564|gb|EIN32610.1| hypothetical protein ECFDA505_0174 [Escherichia coli FDA505]
gi|390676297|gb|EIN52403.1| hypothetical protein ECFRIK1985_0177 [Escherichia coli FRIK1985]
gi|390690065|gb|EIN64967.1| hypothetical protein ECPA3_0288 [Escherichia coli PA3]
gi|390693859|gb|EIN68476.1| hypothetical protein ECPA9_0327 [Escherichia coli PA9]
gi|390694821|gb|EIN69379.1| hypothetical protein ECPA5_0174 [Escherichia coli PA5]
gi|390709644|gb|EIN82726.1| hypothetical protein ECPA10_0176 [Escherichia coli PA10]
gi|390711907|gb|EIN84865.1| hypothetical protein ECPA15_0328 [Escherichia coli PA15]
gi|390715219|gb|EIN88086.1| hypothetical protein ECPA14_0176 [Escherichia coli PA14]
gi|390716648|gb|EIN89443.1| hypothetical protein ECPA25_5744 [Escherichia coli PA25]
gi|390721819|gb|EIN94513.1| hypothetical protein ECPA22_0390 [Escherichia coli PA22]
gi|390734886|gb|EIO06315.1| hypothetical protein ECPA24_0175 [Escherichia coli PA24]
gi|390738280|gb|EIO09498.1| hypothetical protein ECPA28_0328 [Escherichia coli PA28]
gi|390753370|gb|EIO23093.1| hypothetical protein ECPA31_0175 [Escherichia coli PA31]
gi|390753709|gb|EIO23386.1| hypothetical protein ECPA32_0200 [Escherichia coli PA32]
gi|390758197|gb|EIO27665.1| hypothetical protein ECPA33_0175 [Escherichia coli PA33]
gi|390763454|gb|EIO32703.1| hypothetical protein ECPA40_0396 [Escherichia coli PA40]
gi|390777334|gb|EIO45178.1| hypothetical protein ECPA41_0176 [Escherichia coli PA41]
gi|390781203|gb|EIO48887.1| hypothetical protein ECPA42_0326 [Escherichia coli PA42]
gi|390788099|gb|EIO55569.1| hypothetical protein ECPA39_0200 [Escherichia coli PA39]
gi|390796482|gb|EIO63758.1| hypothetical protein ECTW10246_0577 [Escherichia coli TW10246]
gi|390802941|gb|EIO69970.1| hypothetical protein ECTW11039_0330 [Escherichia coli TW11039]
gi|390811709|gb|EIO78396.1| hypothetical protein ECTW07945_0320 [Escherichia coli TW07945]
gi|390812734|gb|EIO79410.1| hypothetical protein ECTW09109_0391 [Escherichia coli TW09109]
gi|390824906|gb|EIO90855.1| hypothetical protein ECTW09098_0271 [Escherichia coli TW09098]
gi|390837897|gb|EIP02215.1| hypothetical protein ECEC4203_0177 [Escherichia coli EC4203]
gi|390841125|gb|EIP05096.1| hypothetical protein ECEC4196_0177 [Escherichia coli EC4196]
gi|390845019|gb|EIP08705.1| hypothetical protein ECTW09195_0197 [Escherichia coli TW09195]
gi|390856481|gb|EIP19064.1| hypothetical protein ECTW14301_0179 [Escherichia coli TW14301]
gi|390861439|gb|EIP23687.1| hypothetical protein ECEC4421_0175 [Escherichia coli EC4421]
gi|390862634|gb|EIP24809.1| hypothetical protein ECTW14313_0177 [Escherichia coli TW14313]
gi|390872619|gb|EIP33908.1| hypothetical protein ECEC4422_0326 [Escherichia coli EC4422]
gi|390877829|gb|EIP38724.1| hypothetical protein ECEC4013_0395 [Escherichia coli EC4013]
gi|390887286|gb|EIP47270.1| hypothetical protein ECEC4402_0179 [Escherichia coli EC4402]
gi|390888933|gb|EIP48715.1| hypothetical protein ECEC4439_0177 [Escherichia coli EC4439]
gi|390896288|gb|EIP55678.1| hypothetical protein ECEC4436_0175 [Escherichia coli EC4436]
gi|390904652|gb|EIP63648.1| hypothetical protein ECEC1738_0391 [Escherichia coli EC1738]
gi|390912354|gb|EIP71006.1| hypothetical protein ECEC4437_0284 [Escherichia coli EC4437]
gi|390912926|gb|EIP71572.1| hypothetical protein ECEC1734_0323 [Escherichia coli EC1734]
gi|390914317|gb|EIP72861.1| hypothetical protein ECEC1863_5647 [Escherichia coli EC1863]
gi|390926765|gb|EIP84324.1| hypothetical protein ECEC1845_0177 [Escherichia coli EC1845]
gi|408073684|gb|EKH07993.1| hypothetical protein ECPA7_0699 [Escherichia coli PA7]
gi|408077420|gb|EKH11628.1| hypothetical protein ECFRIK920_0237 [Escherichia coli FRIK920]
gi|408087432|gb|EKH20881.1| hypothetical protein ECPA34_0329 [Escherichia coli PA34]
gi|408092037|gb|EKH25236.1| hypothetical protein ECFDA506_0651 [Escherichia coli FDA506]
gi|408097777|gb|EKH30660.1| hypothetical protein ECFDA507_0185 [Escherichia coli FDA507]
gi|408111386|gb|EKH43137.1| hypothetical protein ECFRIK1999_0314 [Escherichia coli FRIK1999]
gi|408117495|gb|EKH48680.1| hypothetical protein ECFRIK1997_0331 [Escherichia coli FRIK1997]
gi|408123190|gb|EKH53992.1| hypothetical protein ECNE1487_0446 [Escherichia coli NE1487]
gi|408131419|gb|EKH61461.1| hypothetical protein ECNE037_0330 [Escherichia coli NE037]
gi|408133108|gb|EKH63025.1| hypothetical protein ECFRIK2001_0572 [Escherichia coli FRIK2001]
gi|408142312|gb|EKH71693.1| RF-1 domain-containing protein [Escherichia coli PA4]
gi|408151028|gb|EKH79546.1| hypothetical protein ECPA23_0139 [Escherichia coli PA23]
gi|408154646|gb|EKH82977.1| hypothetical protein ECPA49_0328 [Escherichia coli PA49]
gi|408159819|gb|EKH87871.1| hypothetical protein ECPA45_0326 [Escherichia coli PA45]
gi|408168082|gb|EKH95535.1| hypothetical protein ECTT12B_0328 [Escherichia coli TT12B]
gi|408173869|gb|EKI00872.1| hypothetical protein ECMA6_0442 [Escherichia coli MA6]
gi|408188058|gb|EKI13947.1| hypothetical protein ECCB7326_0180 [Escherichia coli CB7326]
gi|408194110|gb|EKI19610.1| hypothetical protein ECEC96038_0129 [Escherichia coli EC96038]
gi|408234551|gb|EKI57564.1| hypothetical protein ECPA38_0180 [Escherichia coli PA38]
gi|408240890|gb|EKI63541.1| hypothetical protein ECEC1735_0285 [Escherichia coli EC1735]
gi|408250396|gb|EKI72256.1| hypothetical protein ECEC1736_0175 [Escherichia coli EC1736]
gi|408254677|gb|EKI76180.1| hypothetical protein ECEC1737_0176 [Escherichia coli EC1737]
gi|408260980|gb|EKI82029.1| hypothetical protein ECEC1846_0174 [Escherichia coli EC1846]
gi|408269590|gb|EKI89835.1| hypothetical protein ECEC1847_0175 [Escherichia coli EC1847]
gi|408271504|gb|EKI91631.1| hypothetical protein ECEC1848_0391 [Escherichia coli EC1848]
gi|408280464|gb|EKJ00017.1| hypothetical protein ECEC1849_0175 [Escherichia coli EC1849]
gi|408286235|gb|EKJ05163.1| hypothetical protein ECEC1850_0344 [Escherichia coli EC1850]
gi|408289607|gb|EKJ08365.1| hypothetical protein ECEC1856_0185 [Escherichia coli EC1856]
gi|408301882|gb|EKJ19443.1| hypothetical protein ECEC1862_0179 [Escherichia coli EC1862]
gi|408303310|gb|EKJ20776.1| hypothetical protein ECEC1866_5801 [Escherichia coli EC1866]
gi|408319593|gb|EKJ35719.1| hypothetical protein ECEC1868_0331 [Escherichia coli EC1868]
gi|408320311|gb|EKJ36414.1| hypothetical protein ECEC1870_5902 [Escherichia coli EC1870]
gi|408332552|gb|EKJ47587.1| hypothetical protein ECEC1869_0330 [Escherichia coli EC1869]
gi|408338352|gb|EKJ53000.1| hypothetical protein ECNE098_0327 [Escherichia coli NE098]
gi|408351173|gb|EKJ64964.1| hypothetical protein ECFRIK523_0186 [Escherichia coli FRIK523]
gi|408353720|gb|EKJ67215.1| hypothetical protein EC01304_0232 [Escherichia coli 0.1304]
gi|408560604|gb|EKK36867.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 5.2239]
gi|408560996|gb|EKK37244.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3.4870]
gi|408561613|gb|EKK37816.1| RF-1 domain-containing protein [Escherichia coli 6.0172]
gi|408586262|gb|EKK61045.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 8.0586]
gi|408592193|gb|EKK66586.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 8.2524]
gi|408593945|gb|EKK68253.1| RF-1 domain-containing protein [Escherichia coli 10.0833]
gi|408606406|gb|EKK79853.1| RF-1 domain-containing protein [Escherichia coli 8.0416]
gi|408613563|gb|EKK86851.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 88.0221]
gi|408618406|gb|EKK91493.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 10.0821]
gi|427215899|gb|EKV85065.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 88.1042]
gi|427219341|gb|EKV88310.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 89.0511]
gi|427219590|gb|EKV88552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 88.1467]
gi|427235240|gb|EKW02862.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 90.0039]
gi|427235478|gb|EKW03099.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 90.2281]
gi|427238046|gb|EKW05568.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 90.0091]
gi|427252426|gb|EKW18915.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 93.0056]
gi|427254166|gb|EKW20534.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 93.0055]
gi|427255307|gb|EKW21578.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 94.0618]
gi|427271773|gb|EKW36564.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 95.0943]
gi|427272321|gb|EKW37074.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 95.0183]
gi|427278570|gb|EKW43027.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 95.1288]
gi|427287260|gb|EKW51028.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0428]
gi|427293454|gb|EKW56708.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0427]
gi|427295032|gb|EKW58186.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0939]
gi|427305732|gb|EKW68326.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 97.0003]
gi|427307915|gb|EKW70339.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0932]
gi|427312352|gb|EKW74508.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0107]
gi|427322897|gb|EKW84518.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 97.1742]
gi|427323618|gb|EKW85179.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 97.0007]
gi|427335540|gb|EKW96570.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0713]
gi|427335941|gb|EKW96970.1| RF-1 domain-containing protein [Escherichia coli 99.0678]
gi|427337398|gb|EKW98316.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0672]
gi|429260880|gb|EKY44411.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 96.0109]
gi|429262305|gb|EKY45648.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 97.0010]
gi|444543519|gb|ELV22781.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0814]
gi|444552222|gb|ELV30065.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
09BKT078844]
gi|444552612|gb|ELV30399.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0815]
gi|444566201|gb|ELV43037.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0839]
gi|444568491|gb|ELV45166.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0816]
gi|444573041|gb|ELV49442.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0848]
gi|444583681|gb|ELV59377.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1753]
gi|444586548|gb|ELV62046.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1775]
gi|444586854|gb|ELV62336.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1793]
gi|444601135|gb|ELV75944.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli ATCC
700728]
gi|444601468|gb|ELV76275.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA11]
gi|444616199|gb|ELV90369.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA13]
gi|444616607|gb|ELV90769.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA19]
gi|444625244|gb|ELV99115.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA2]
gi|444633786|gb|ELW07289.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA48]
gi|444634112|gb|ELW07603.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA47]
gi|444639413|gb|ELW12732.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA8]
gi|444649208|gb|ELW22114.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 7.1982]
gi|444651371|gb|ELW24180.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1781]
gi|444655396|gb|ELW28015.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.1762]
gi|444664574|gb|ELW36762.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli PA35]
gi|444668857|gb|ELW40857.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3.4880]
gi|444673756|gb|ELW45382.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 95.0083]
gi|444675198|gb|ELW46679.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 99.0670]
Length = 136
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|170680631|ref|YP_001742320.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
gi|293418077|ref|ZP_06660699.1| yaeJ protein [Escherichia coli B185]
gi|331651097|ref|ZP_08352125.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
gi|386703389|ref|YP_006167236.1| hypothetical protein P12B_c0179 [Escherichia coli P12b]
gi|387610664|ref|YP_006113780.1| putative peptidyl-tRNA hydrolase [Escherichia coli ETEC H10407]
gi|417632114|ref|ZP_12282340.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_MHI813]
gi|422834482|ref|ZP_16882544.1| hypothetical protein ESOG_02145 [Escherichia coli E101]
gi|432452946|ref|ZP_19695193.1| ribosome-associated protein [Escherichia coli KTE193]
gi|432944757|ref|ZP_20141167.1| ribosome-associated protein [Escherichia coli KTE196]
gi|433031598|ref|ZP_20219423.1| ribosome-associated protein [Escherichia coli KTE112]
gi|433041687|ref|ZP_20229226.1| ribosome-associated protein [Escherichia coli KTE117]
gi|450185128|ref|ZP_21888975.1| hypothetical protein A364_01608 [Escherichia coli SEPT362]
gi|170518349|gb|ACB16527.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
gi|291430795|gb|EFF03793.1| yaeJ protein [Escherichia coli B185]
gi|309700400|emb|CBI99688.1| putative peptidyl-tRNA hydrolase [Escherichia coli ETEC H10407]
gi|331051551|gb|EGI23600.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
gi|345368265|gb|EGX00272.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_MHI813]
gi|371602002|gb|EHN90721.1| hypothetical protein ESOG_02145 [Escherichia coli E101]
gi|383101557|gb|AFG39066.1| hypothetical protein P12B_c0179 [Escherichia coli P12b]
gi|430975540|gb|ELC92435.1| ribosome-associated protein [Escherichia coli KTE193]
gi|431464688|gb|ELH44807.1| ribosome-associated protein [Escherichia coli KTE196]
gi|431561332|gb|ELI34716.1| ribosome-associated protein [Escherichia coli KTE117]
gi|431561533|gb|ELI34902.1| ribosome-associated protein [Escherichia coli KTE112]
gi|449325398|gb|EMD15305.1| hypothetical protein A364_01608 [Escherichia coli SEPT362]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|398830744|ref|ZP_10588925.1| protein chain release factor B [Phyllobacterium sp. YR531]
gi|398213324|gb|EJM99917.1| protein chain release factor B [Phyllobacterium sp. YR531]
Length = 145
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L+ + RS+GPGGQ+VN VST V +RF A L +DV +LI L R KDG ++I
Sbjct: 20 DLEENFIRSAGPGGQNVNKVSTAVQLRFYAVRAG-LPDDVLARLISLAGQRATKDGEVLI 78
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
+++R R+Q+ N DA + +I KAA+
Sbjct: 79 EANRFRTQERNRQDARERMVALISKAAE 106
>gi|82542790|ref|YP_406737.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella boydii
Sb227]
gi|416294348|ref|ZP_11650833.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri CDC
796-83]
gi|417680437|ref|ZP_12329824.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 3594-74]
gi|420323850|ref|ZP_14825640.1| putative-tRNA hydrolase domain protein [Shigella flexneri CCH060]
gi|420351067|ref|ZP_14852270.1| putative-tRNA hydrolase domain protein [Shigella boydii 4444-74]
gi|421680912|ref|ZP_16120754.1| putative-tRNA hydrolase domain protein [Shigella flexneri 1485-80]
gi|81244201|gb|ABB64909.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|320186614|gb|EFW61339.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri CDC
796-83]
gi|332098782|gb|EGJ03742.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 3594-74]
gi|391257725|gb|EIQ16835.1| putative-tRNA hydrolase domain protein [Shigella flexneri CCH060]
gi|391289901|gb|EIQ48385.1| putative-tRNA hydrolase domain protein [Shigella boydii 4444-74]
gi|404342147|gb|EJZ68537.1| putative-tRNA hydrolase domain protein [Shigella flexneri 1485-80]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|387895296|ref|YP_006325593.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
fluorescens A506]
gi|388467711|ref|ZP_10141921.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas synxantha
BG33R]
gi|423693247|ref|ZP_17667767.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas fluorescens
SS101]
gi|387160434|gb|AFJ55633.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas fluorescens
A506]
gi|387998394|gb|EIK59723.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas fluorescens
SS101]
gi|388011291|gb|EIK72478.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas synxantha
BG33R]
Length = 137
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L E K++L+ L +R+ +G L++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPEFYKERLLALRDSRITSEGVLVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELIQSATK 100
>gi|302036838|ref|YP_003797160.1| putative peptide chain release factor, class I [Candidatus
Nitrospira defluvii]
gi|190343252|gb|ACE75640.1| peptidyl-tRNA hydrolase domain protein [Candidatus Nitrospira
defluvii]
gi|300604902|emb|CBK41235.1| putative Peptide chain release factor, class I [Candidatus
Nitrospira defluvii]
Length = 138
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+++T R+ G GGQHVN VS+ + +RF + ++ L K++L+ L +R++++G +I
Sbjct: 13 EEIELTAVRAQGAGGQHVNKVSSAIHLRFNILGSS-LPPFYKERLLALRDHRISREGTII 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
IK+ +RSQ+ N A A+ L+ +I A
Sbjct: 72 IKAQDSRSQERNRALALERLQELIRSVA 99
>gi|120610977|ref|YP_970655.1| class I peptide chain release factor [Acidovorax citrulli AAC00-1]
gi|120589441|gb|ABM32881.1| Class I peptide chain release factor [Acidovorax citrulli AAC00-1]
Length = 148
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 73 IPVVIPRFSYITEELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLI 130
+P R +E +I ++ R+ GPGGQ+VN VS+ V +RF + AA+ L EDVK +L+
Sbjct: 8 MPPAAGRAPLRVDEREIVFTAMRAQGPGGQNVNKVSSAVQLRFDI-AASSLPEDVKARLL 66
Query: 131 ELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
L R+ + G ++IK+ + R+Q+ N DA+ L
Sbjct: 67 ALPDARITQAGVVVIKAQQFRTQEANRLDALQRL 100
>gi|447918045|ref|YP_007398613.1| hypothetical protein H045_15260 [Pseudomonas poae RE*1-1-14]
gi|445201908|gb|AGE27117.1| hypothetical protein H045_15260 [Pseudomonas poae RE*1-1-14]
Length = 137
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + ++ L E K++L+ L +R+ DG L++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPGSS-LPEFYKERLLALRDSRITSDGVLVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELIQSATK 100
>gi|170021455|ref|YP_001726409.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
ATCC 8739]
gi|169756383|gb|ACA79082.1| Class I peptide chain release factor [Escherichia coli ATCC 8739]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|260842424|ref|YP_003220202.1| hypothetical protein ECO103_0190 [Escherichia coli O103:H2 str.
12009]
gi|257757571|dbj|BAI29068.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|224371795|ref|YP_002605959.1| hypothetical protein HRM2_47460 [Desulfobacterium autotrophicum
HRM2]
gi|223694512|gb|ACN17795.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A++ L E K++L+ LN R+ DG +II
Sbjct: 14 EIEMTAVRAQGAGGQNVNKVSSAIHLRFNIRASS-LPEYYKEKLLGLNDQRITNDGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
KS RSQ++N A+ L +I +
Sbjct: 73 KSQEHRSQEMNREAALARLVALIHQC 98
>gi|194439906|ref|ZP_03071968.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 101-1]
gi|251783750|ref|YP_002998054.1| hypothetical protein B21_00189 [Escherichia coli BL21(DE3)]
gi|253774781|ref|YP_003037612.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160311|ref|YP_003043419.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B str.
REL606]
gi|254287114|ref|YP_003052862.1| hypothetical protein ECD_00190 [Escherichia coli BL21(DE3)]
gi|300932150|ref|ZP_07147433.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 187-1]
gi|312970293|ref|ZP_07784475.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1827-70]
gi|421775104|ref|ZP_16211714.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli AD30]
gi|422788428|ref|ZP_16841165.1| RF-1 domain-containing protein [Escherichia coli H489]
gi|422792843|ref|ZP_16845542.1| RF-1 domain-containing protein [Escherichia coli TA007]
gi|442597790|ref|ZP_21015568.1| Hypothetical protein YaeJ with similarity to translation release
factor [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|194421152|gb|EDX37177.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 101-1]
gi|242376023|emb|CAQ30706.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253325825|gb|ACT30427.1| Class I peptide chain release factor [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972212|gb|ACT37883.1| hypothetical protein ECB_00190 [Escherichia coli B str. REL606]
gi|253976421|gb|ACT42091.1| hypothetical protein ECD_00190 [Escherichia coli BL21(DE3)]
gi|300460087|gb|EFK23580.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 187-1]
gi|310337791|gb|EFQ02902.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 1827-70]
gi|323959953|gb|EGB55600.1| RF-1 domain-containing protein [Escherichia coli H489]
gi|323970671|gb|EGB65927.1| RF-1 domain-containing protein [Escherichia coli TA007]
gi|408459536|gb|EKJ83317.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli AD30]
gi|441653455|emb|CCQ03784.1| Hypothetical protein YaeJ with similarity to translation release
factor [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|307730043|ref|YP_003907267.1| class I peptide chain release factor [Burkholderia sp. CCGE1003]
gi|307584578|gb|ADN57976.1| Class I peptide chain release factor [Burkholderia sp. CCGE1003]
Length = 135
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+S E+++T R+ G GGQ+VN VS+ + +RF V A++ L + +K +L+ L+ R+
Sbjct: 4 RYSIPLHEVELTAVRAQGAGGQNVNKVSSAIQLRFDVRASS-LPDVLKMRLLALSDRRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+DG ++IK+ R+Q LN A A+ L ++
Sbjct: 63 RDGVVVIKAQEHRTQDLNRAAALARLDELV 92
>gi|157157087|ref|YP_001461361.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
E24377A]
gi|157159657|ref|YP_001456975.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
gi|187732441|ref|YP_001878994.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella boydii
CDC 3083-94]
gi|188494154|ref|ZP_03001424.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 53638]
gi|191167036|ref|ZP_03028858.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
gi|193063171|ref|ZP_03044262.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
gi|193067745|ref|ZP_03048712.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E110019]
gi|194428309|ref|ZP_03060851.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
gi|194435008|ref|ZP_03067249.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
gi|218552773|ref|YP_002385686.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
IAI1]
gi|218693657|ref|YP_002401324.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
55989]
gi|260853402|ref|YP_003227293.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
O26:H11 str. 11368]
gi|291281014|ref|YP_003497832.1| hypothetical protein G2583_0195 [Escherichia coli O55:H7 str.
CB9615]
gi|293476849|ref|ZP_06665257.1| yaeJ protein [Escherichia coli B088]
gi|300816232|ref|ZP_07096455.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 107-1]
gi|300824085|ref|ZP_07104205.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 119-7]
gi|300902011|ref|ZP_07120038.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 84-1]
gi|300920122|ref|ZP_07136575.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 115-1]
gi|300923016|ref|ZP_07139083.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 182-1]
gi|300938601|ref|ZP_07153333.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 21-1]
gi|301305328|ref|ZP_07211424.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 124-1]
gi|301330006|ref|ZP_07222693.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 78-1]
gi|307311360|ref|ZP_07591002.1| Class I peptide chain release factor [Escherichia coli W]
gi|309796369|ref|ZP_07690778.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 145-7]
gi|331666433|ref|ZP_08367314.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
gi|331680771|ref|ZP_08381430.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
gi|332282866|ref|ZP_08395279.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
gi|378714470|ref|YP_005279363.1| class I peptide chain release factor [Escherichia coli KO11FL]
gi|386607493|ref|YP_006122979.1| hypothetical protein ECW_m0188 [Escherichia coli W]
gi|386698690|ref|YP_006162527.1| hypothetical protein KO11_00930 [Escherichia coli KO11FL]
gi|386707920|ref|YP_006171641.1| hypothetical protein WFL_00930 [Escherichia coli W]
gi|387505119|ref|YP_006157375.1| hypothetical protein ECO55CA74_00940 [Escherichia coli O55:H7 str.
RM12579]
gi|404373504|ref|ZP_10978767.1| hypothetical protein ESCG_01377 [Escherichia sp. 1_1_43]
gi|407467646|ref|YP_006785912.1| hypothetical protein O3O_04770 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483637|ref|YP_006780786.1| hypothetical protein O3K_20610 [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484177|ref|YP_006771723.1| hypothetical protein O3M_20510 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415780860|ref|ZP_11490647.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EPECa14]
gi|415801885|ref|ZP_11499791.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E128010]
gi|415814296|ref|ZP_11505916.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli LT-68]
gi|415832555|ref|ZP_11517982.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli OK1357]
gi|415864391|ref|ZP_11537485.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1]
gi|415877402|ref|ZP_11543579.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 79-10]
gi|416282264|ref|ZP_11646337.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii ATCC 9905]
gi|416334569|ref|ZP_11671402.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli WV_060327]
gi|416342901|ref|ZP_11676905.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EC4100B]
gi|416790031|ref|ZP_11880927.1| hypothetical protein ECO9389_12489 [Escherichia coli O157:H- str.
493-89]
gi|416795846|ref|ZP_11883388.1| hypothetical protein ECO2687_24853 [Escherichia coli O157:H- str. H
2687]
gi|416807875|ref|ZP_11888214.1| hypothetical protein ECO7815_24381 [Escherichia coli O55:H7 str.
3256-97]
gi|416819024|ref|ZP_11893094.1| hypothetical protein ECO5905_24126 [Escherichia coli O55:H7 str.
USDA 5905]
gi|416828361|ref|ZP_11897960.1| hypothetical protein ECOSU61_24498 [Escherichia coli O157:H7 str.
LSU-61]
gi|417126750|ref|ZP_11974304.1| RF-1 domain protein [Escherichia coli 97.0246]
gi|417132242|ref|ZP_11977027.1| RF-1 domain protein [Escherichia coli 5.0588]
gi|417142886|ref|ZP_11985267.1| RF-1 domain protein [Escherichia coli 97.0259]
gi|417153133|ref|ZP_11991924.1| RF-1 domain protein [Escherichia coli 96.0497]
gi|417168456|ref|ZP_12000907.1| RF-1 domain protein [Escherichia coli 99.0741]
gi|417175275|ref|ZP_12005071.1| RF-1 domain protein [Escherichia coli 3.2608]
gi|417181802|ref|ZP_12008638.1| RF-1 domain protein [Escherichia coli 93.0624]
gi|417216577|ref|ZP_12023249.1| RF-1 domain protein [Escherichia coli JB1-95]
gi|417224831|ref|ZP_12028122.1| RF-1 domain protein [Escherichia coli 96.154]
gi|417229925|ref|ZP_12031511.1| RF-1 domain protein [Escherichia coli 5.0959]
gi|417252937|ref|ZP_12044696.1| RF-1 domain protein [Escherichia coli 4.0967]
gi|417269930|ref|ZP_12057290.1| RF-1 domain protein [Escherichia coli 3.3884]
gi|417295339|ref|ZP_12082592.1| RF-1 domain protein [Escherichia coli 900105 (10e)]
gi|417306725|ref|ZP_12093611.1| hypothetical protein PPECC33_1830 [Escherichia coli PCN033]
gi|417579411|ref|ZP_12230237.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_B2F1]
gi|417595042|ref|ZP_12245718.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3030-1]
gi|417600455|ref|ZP_12251042.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_94C]
gi|417621423|ref|ZP_12271754.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_H.1.8]
gi|417637460|ref|ZP_12287641.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli TX1999]
gi|417665262|ref|ZP_12314831.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_O31]
gi|417671040|ref|ZP_12320541.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae
155-74]
gi|417803533|ref|ZP_12450573.1| hypothetical protein HUSEC_00975 [Escherichia coli O104:H4 str.
LB226692]
gi|417831295|ref|ZP_12477823.1| hypothetical protein HUSEC41_00970 [Escherichia coli O104:H4 str.
01-09591]
gi|417864285|ref|ZP_12509331.1| hypothetical protein C22711_1218 [Escherichia coli O104:H4 str.
C227-11]
gi|418039520|ref|ZP_12677783.1| Class I peptide chain release factor [Escherichia coli W26]
gi|419073313|ref|ZP_13618889.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3F]
gi|419113014|ref|ZP_13658050.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5A]
gi|419118522|ref|ZP_13663510.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5B]
gi|419124063|ref|ZP_13668973.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5C]
gi|419129760|ref|ZP_13674617.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5D]
gi|419140157|ref|ZP_13684941.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5E]
gi|419168163|ref|ZP_13712564.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7A]
gi|419179213|ref|ZP_13722840.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7C]
gi|419184673|ref|ZP_13728199.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7D]
gi|419189940|ref|ZP_13733413.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7E]
gi|419201221|ref|ZP_13744453.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8B]
gi|419207143|ref|ZP_13750274.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8C]
gi|419213567|ref|ZP_13756602.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8D]
gi|419219406|ref|ZP_13762367.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8E]
gi|419224839|ref|ZP_13767734.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9A]
gi|419230600|ref|ZP_13773396.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9B]
gi|419236004|ref|ZP_13778757.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9C]
gi|419241592|ref|ZP_13784244.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9D]
gi|419246996|ref|ZP_13789615.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9E]
gi|419252831|ref|ZP_13795383.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10A]
gi|419258774|ref|ZP_13801238.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10B]
gi|419264434|ref|ZP_13806824.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10C]
gi|419270376|ref|ZP_13812711.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10D]
gi|419276297|ref|ZP_13818569.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10E]
gi|419281824|ref|ZP_13824049.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10F]
gi|419287704|ref|ZP_13829823.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11A]
gi|419293002|ref|ZP_13835064.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11B]
gi|419298383|ref|ZP_13840408.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11C]
gi|419304700|ref|ZP_13846617.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11D]
gi|419309734|ref|ZP_13851613.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11E]
gi|419315037|ref|ZP_13856870.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12A]
gi|419320835|ref|ZP_13862580.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12B]
gi|419327036|ref|ZP_13868673.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12C]
gi|419332453|ref|ZP_13874020.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12D]
gi|419338206|ref|ZP_13879697.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12E]
gi|419343860|ref|ZP_13885246.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13A]
gi|419348281|ref|ZP_13889636.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13B]
gi|419353184|ref|ZP_13894472.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13C]
gi|419358529|ref|ZP_13899761.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13D]
gi|419363470|ref|ZP_13904654.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13E]
gi|419368472|ref|ZP_13909606.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC14A]
gi|419373630|ref|ZP_13914692.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC14B]
gi|419379055|ref|ZP_13920038.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC14C]
gi|419384313|ref|ZP_13925221.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC14D]
gi|419389608|ref|ZP_13930451.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15A]
gi|419394779|ref|ZP_13935567.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15B]
gi|419400172|ref|ZP_13940907.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15C]
gi|419410503|ref|ZP_13951182.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15D]
gi|419410821|ref|ZP_13951498.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15E]
gi|419804933|ref|ZP_14330082.1| Class I peptide chain release factor [Escherichia coli AI27]
gi|419865184|ref|ZP_14387573.1| hypothetical protein ECO9340_02809 [Escherichia coli O103:H25 str.
CVM9340]
gi|419870147|ref|ZP_14392284.1| hypothetical protein ECO9450_22157 [Escherichia coli O103:H2 str.
CVM9450]
gi|419875677|ref|ZP_14397502.1| hypothetical protein ECO9534_22622 [Escherichia coli O111:H11 str.
CVM9534]
gi|419880136|ref|ZP_14401545.1| hypothetical protein ECO9545_20233 [Escherichia coli O111:H11 str.
CVM9545]
gi|419904681|ref|ZP_14423672.1| hypothetical protein ECO9942_27002 [Escherichia coli O26:H11 str.
CVM9942]
gi|419906020|ref|ZP_14424954.1| class I peptide chain release factor [Escherichia coli O26:H11 str.
CVM10026]
gi|419921772|ref|ZP_14439808.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 541-15]
gi|419929346|ref|ZP_14447021.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 541-1]
gi|419951512|ref|ZP_14467703.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli CUMT8]
gi|420100329|ref|ZP_14611509.1| hypothetical protein ECO9455_01825 [Escherichia coli O111:H11 str.
CVM9455]
gi|420105923|ref|ZP_14616355.1| hypothetical protein ECO9553_12075 [Escherichia coli O111:H11 str.
CVM9553]
gi|420113055|ref|ZP_14622820.1| hypothetical protein ECO10021_16246 [Escherichia coli O26:H11 str.
CVM10021]
gi|420119517|ref|ZP_14628793.1| hypothetical protein ECO10030_10517 [Escherichia coli O26:H11 str.
CVM10030]
gi|420125506|ref|ZP_14634308.1| hypothetical protein ECO10224_16690 [Escherichia coli O26:H11 str.
CVM10224]
gi|420132837|ref|ZP_14641140.1| hypothetical protein ECO9952_03986 [Escherichia coli O26:H11 str.
CVM9952]
gi|420283456|ref|ZP_14785681.1| aminoacyl-tRNA hydrolase [Escherichia coli TW06591]
gi|420383832|ref|ZP_14883224.1| putative-tRNA hydrolase domain protein [Escherichia coli EPECa12]
gi|420389524|ref|ZP_14888798.1| putative-tRNA hydrolase domain protein [Escherichia coli EPEC
C342-62]
gi|422761869|ref|ZP_16815627.1| RF-1 domain-containing protein [Escherichia coli E1167]
gi|422776832|ref|ZP_16830486.1| RF-1 domain-containing protein [Escherichia coli H120]
gi|422957467|ref|ZP_16969681.1| hypothetical protein ESQG_01176 [Escherichia coli H494]
gi|422990895|ref|ZP_16981666.1| hypothetical protein EUAG_00488 [Escherichia coli O104:H4 str.
C227-11]
gi|422992835|ref|ZP_16983599.1| hypothetical protein EUBG_00486 [Escherichia coli O104:H4 str.
C236-11]
gi|422998044|ref|ZP_16988800.1| hypothetical protein EUEG_00472 [Escherichia coli O104:H4 str.
09-7901]
gi|423006528|ref|ZP_16997272.1| hypothetical protein EUDG_04948 [Escherichia coli O104:H4 str.
04-8351]
gi|423008150|ref|ZP_16998888.1| hypothetical protein EUFG_00487 [Escherichia coli O104:H4 str.
11-3677]
gi|423022336|ref|ZP_17013039.1| hypothetical protein EUHG_00489 [Escherichia coli O104:H4 str.
11-4404]
gi|423027491|ref|ZP_17018184.1| hypothetical protein EUIG_00495 [Escherichia coli O104:H4 str.
11-4522]
gi|423033328|ref|ZP_17024012.1| hypothetical protein EUJG_02387 [Escherichia coli O104:H4 str.
11-4623]
gi|423036194|ref|ZP_17026868.1| hypothetical protein EUKG_00471 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041314|ref|ZP_17031981.1| hypothetical protein EULG_00489 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423048000|ref|ZP_17038657.1| hypothetical protein EUMG_00488 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423056538|ref|ZP_17045343.1| hypothetical protein EUNG_04941 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058549|ref|ZP_17047345.1| hypothetical protein EUOG_00489 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423709913|ref|ZP_17684267.1| hypothetical protein ESTG_04349 [Escherichia coli B799]
gi|424746732|ref|ZP_18174954.1| hypothetical protein CFSAN001629_01971 [Escherichia coli O26:H11
str. CFSAN001629]
gi|424756629|ref|ZP_18184435.1| hypothetical protein CFSAN001630_04029 [Escherichia coli O111:H11
str. CFSAN001630]
gi|425246549|ref|ZP_18639788.1| aminoacyl-tRNA hydrolase [Escherichia coli 5905]
gi|425264788|ref|ZP_18656744.1| aminoacyl-tRNA hydrolase [Escherichia coli 5412]
gi|425286707|ref|ZP_18677661.1| aminoacyl-tRNA hydrolase [Escherichia coli 3006]
gi|425376933|ref|ZP_18761365.1| aminoacyl-tRNA hydrolase [Escherichia coli EC1865]
gi|425420792|ref|ZP_18802036.1| aminoacyl-tRNA hydrolase [Escherichia coli 0.1288]
gi|427803265|ref|ZP_18970332.1| hypothetical protein BN16_06631 [Escherichia coli chi7122]
gi|427807870|ref|ZP_18974935.1| hypothetical protein BN17_46151 [Escherichia coli]
gi|429722393|ref|ZP_19257292.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774471|ref|ZP_19306475.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02030]
gi|429779731|ref|ZP_19311687.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783786|ref|ZP_19315700.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02092]
gi|429789124|ref|ZP_19321000.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02093]
gi|429795354|ref|ZP_19327181.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02281]
gi|429801280|ref|ZP_19333059.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02318]
gi|429804912|ref|ZP_19336660.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02913]
gi|429809723|ref|ZP_19341426.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-03439]
gi|429815483|ref|ZP_19347143.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-04080]
gi|429820694|ref|ZP_19352309.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-03943]
gi|429906745|ref|ZP_19372715.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910940|ref|ZP_19376897.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429916780|ref|ZP_19382721.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921818|ref|ZP_19387740.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927635|ref|ZP_19393542.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429931568|ref|ZP_19397464.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429938111|ref|ZP_19403992.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429938826|ref|ZP_19404700.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946467|ref|ZP_19412323.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949115|ref|ZP_19414963.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957382|ref|ZP_19423211.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432368184|ref|ZP_19611292.1| ribosome-associated protein [Escherichia coli KTE10]
gi|432379808|ref|ZP_19622783.1| ribosome-associated protein [Escherichia coli KTE12]
gi|432479516|ref|ZP_19721482.1| ribosome-associated protein [Escherichia coli KTE210]
gi|432483834|ref|ZP_19725763.1| ribosome-associated protein [Escherichia coli KTE212]
gi|432529493|ref|ZP_19766551.1| ribosome-associated protein [Escherichia coli KTE233]
gi|432532406|ref|ZP_19769414.1| ribosome-associated protein [Escherichia coli KTE234]
gi|432614994|ref|ZP_19851131.1| ribosome-associated protein [Escherichia coli KTE75]
gi|432669014|ref|ZP_19904569.1| ribosome-associated protein [Escherichia coli KTE119]
gi|432677788|ref|ZP_19913218.1| ribosome-associated protein [Escherichia coli KTE142]
gi|432678605|ref|ZP_19914010.1| ribosome-associated protein [Escherichia coli KTE143]
gi|432763475|ref|ZP_19997932.1| ribosome-associated protein [Escherichia coli KTE48]
gi|432830167|ref|ZP_20063777.1| ribosome-associated protein [Escherichia coli KTE135]
gi|432833293|ref|ZP_20066842.1| ribosome-associated protein [Escherichia coli KTE136]
gi|432872735|ref|ZP_20092551.1| ribosome-associated protein [Escherichia coli KTE147]
gi|432966333|ref|ZP_20155253.1| ribosome-associated protein [Escherichia coli KTE203]
gi|433090539|ref|ZP_20276852.1| ribosome-associated protein [Escherichia coli KTE138]
gi|433128479|ref|ZP_20313967.1| ribosome-associated protein [Escherichia coli KTE163]
gi|433133380|ref|ZP_20318766.1| ribosome-associated protein [Escherichia coli KTE166]
gi|433171958|ref|ZP_20356528.1| ribosome-associated protein [Escherichia coli KTE232]
gi|443616203|ref|YP_007380059.1| hypothetical protein APECO78_04390 [Escherichia coli APEC O78]
gi|450209565|ref|ZP_21893980.1| hypothetical protein C202_00915 [Escherichia coli O08]
gi|157065337|gb|ABV04592.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
gi|157079117|gb|ABV18825.1| putative peptidyl-tRNA hydrolase [Escherichia coli E24377A]
gi|187429433|gb|ACD08707.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC
3083-94]
gi|188489353|gb|EDU64456.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 53638]
gi|190902929|gb|EDV62656.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
gi|192931079|gb|EDV83682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
gi|192959157|gb|EDV89593.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E110019]
gi|194413684|gb|EDX29964.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
gi|194416744|gb|EDX32872.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
gi|218350389|emb|CAU96072.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218359541|emb|CAQ97079.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|226840717|gb|EEH72719.1| hypothetical protein ESCG_01377 [Escherichia sp. 1_1_43]
gi|257752051|dbj|BAI23553.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|290760887|gb|ADD54848.1| hypothetical protein G2583_0195 [Escherichia coli O55:H7 str.
CB9615]
gi|291321302|gb|EFE60744.1| yaeJ protein [Escherichia coli B088]
gi|300405897|gb|EFJ89435.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 84-1]
gi|300412856|gb|EFJ96166.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 115-1]
gi|300420643|gb|EFK03954.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 182-1]
gi|300456447|gb|EFK19940.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 21-1]
gi|300523362|gb|EFK44431.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 119-7]
gi|300531439|gb|EFK52501.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 107-1]
gi|300839433|gb|EFK67193.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 124-1]
gi|300843960|gb|EFK71720.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 78-1]
gi|306908339|gb|EFN38837.1| Class I peptide chain release factor [Escherichia coli W]
gi|308120073|gb|EFO57335.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 145-7]
gi|315059410|gb|ADT73737.1| conserved hypothetical protein [Escherichia coli W]
gi|315254994|gb|EFU34962.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1]
gi|320180900|gb|EFW55822.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii ATCC 9905]
gi|320196931|gb|EFW71552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli WV_060327]
gi|320200282|gb|EFW74868.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EC4100B]
gi|320644768|gb|EFX13812.1| hypothetical protein ECO9389_12489 [Escherichia coli O157:H- str.
493-89]
gi|320652924|gb|EFX21162.1| hypothetical protein ECO2687_24853 [Escherichia coli O157:H- str. H
2687]
gi|320658312|gb|EFX26041.1| hypothetical protein ECO7815_24381 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320663622|gb|EFX30906.1| hypothetical protein ECO5905_24126 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320668935|gb|EFX35730.1| hypothetical protein ECOSU61_24498 [Escherichia coli O157:H7 str.
LSU-61]
gi|323157971|gb|EFZ44073.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli EPECa14]
gi|323160241|gb|EFZ46199.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E128010]
gi|323170984|gb|EFZ56633.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli LT-68]
gi|323181700|gb|EFZ67114.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli OK1357]
gi|323380031|gb|ADX52299.1| Class I peptide chain release factor [Escherichia coli KO11FL]
gi|323945669|gb|EGB41718.1| RF-1 domain-containing protein [Escherichia coli H120]
gi|324118312|gb|EGC12207.1| RF-1 domain-containing protein [Escherichia coli E1167]
gi|331066644|gb|EGI38521.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
gi|331072234|gb|EGI43570.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
gi|332097593|gb|EGJ02570.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae
155-74]
gi|332105218|gb|EGJ08564.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
gi|338771691|gb|EGP26425.1| hypothetical protein PPECC33_1830 [Escherichia coli PCN033]
gi|340736164|gb|EGR65214.1| hypothetical protein HUSEC41_00970 [Escherichia coli O104:H4 str.
01-09591]
gi|340742079|gb|EGR76220.1| hypothetical protein HUSEC_00975 [Escherichia coli O104:H4 str.
LB226692]
gi|341917574|gb|EGT67189.1| hypothetical protein C22711_1218 [Escherichia coli O104:H4 str.
C227-11]
gi|342928037|gb|EGU96759.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 79-10]
gi|345344709|gb|EGW77074.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_B2F1]
gi|345354613|gb|EGW86834.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_94C]
gi|345363254|gb|EGW95397.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 3030-1]
gi|345387185|gb|EGX17013.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_H.1.8]
gi|345395780|gb|EGX25518.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli TX1999]
gi|354859394|gb|EHF19842.1| hypothetical protein EUDG_04948 [Escherichia coli O104:H4 str.
04-8351]
gi|354859881|gb|EHF20328.1| hypothetical protein EUAG_00488 [Escherichia coli O104:H4 str.
C227-11]
gi|354866578|gb|EHF27001.1| hypothetical protein EUBG_00486 [Escherichia coli O104:H4 str.
C236-11]
gi|354876912|gb|EHF37272.1| hypothetical protein EUEG_00472 [Escherichia coli O104:H4 str.
09-7901]
gi|354881921|gb|EHF42249.1| hypothetical protein EUHG_00489 [Escherichia coli O104:H4 str.
11-4404]
gi|354885019|gb|EHF45330.1| hypothetical protein EUFG_00487 [Escherichia coli O104:H4 str.
11-3677]
gi|354886466|gb|EHF46753.1| hypothetical protein EUIG_00495 [Escherichia coli O104:H4 str.
11-4522]
gi|354889982|gb|EHF50229.1| hypothetical protein EUJG_02387 [Escherichia coli O104:H4 str.
11-4623]
gi|354902182|gb|EHF62304.1| hypothetical protein EUKG_00471 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354905508|gb|EHF65591.1| hypothetical protein EULG_00489 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354908015|gb|EHF68071.1| hypothetical protein EUMG_00488 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354910286|gb|EHF70314.1| hypothetical protein EUNG_04941 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354918487|gb|EHF78443.1| hypothetical protein EUOG_00489 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|371598084|gb|EHN86898.1| hypothetical protein ESQG_01176 [Escherichia coli H494]
gi|374357113|gb|AEZ38820.1| hypothetical protein ECO55CA74_00940 [Escherichia coli O55:H7 str.
RM12579]
gi|377933888|gb|EHU97732.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC3F]
gi|377966867|gb|EHV30277.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5A]
gi|377974753|gb|EHV38080.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5B]
gi|377978955|gb|EHV42234.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5E]
gi|377983005|gb|EHV46255.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5D]
gi|377983782|gb|EHV47024.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC5C]
gi|378019445|gb|EHV82276.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7A]
gi|378028760|gb|EHV91377.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7C]
gi|378034300|gb|EHV96866.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7D]
gi|378043388|gb|EHW05824.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC7E]
gi|378058128|gb|EHW20348.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8B]
gi|378064685|gb|EHW26845.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8C]
gi|378070182|gb|EHW32265.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8D]
gi|378073912|gb|EHW35957.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC8E]
gi|378083239|gb|EHW45174.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9A]
gi|378083467|gb|EHW45399.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9B]
gi|378091412|gb|EHW53243.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9C]
gi|378095897|gb|EHW57679.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9D]
gi|378104012|gb|EHW65674.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC9E]
gi|378108935|gb|EHW70547.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10A]
gi|378118796|gb|EHW80298.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10B]
gi|378120048|gb|EHW81529.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10C]
gi|378122120|gb|EHW83564.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10D]
gi|378134858|gb|EHW96173.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10E]
gi|378136671|gb|EHW97962.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11A]
gi|378141424|gb|EHX02641.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC10F]
gi|378147774|gb|EHX08920.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11B]
gi|378154354|gb|EHX15430.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11D]
gi|378158180|gb|EHX19210.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11C]
gi|378161943|gb|EHX22912.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC11E]
gi|378176038|gb|EHX36846.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12B]
gi|378176534|gb|EHX37340.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12A]
gi|378177574|gb|EHX38365.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12C]
gi|378190864|gb|EHX51442.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13A]
gi|378192336|gb|EHX52899.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12D]
gi|378193955|gb|EHX54478.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC12E]
gi|378205672|gb|EHX66082.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13B]
gi|378208631|gb|EHX69012.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13D]
gi|378209613|gb|EHX69982.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13C]
gi|378220327|gb|EHX80588.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC13E]
gi|378223414|gb|EHX83638.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC14A]
gi|378227592|gb|EHX87762.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC14B]
gi|378235080|gb|EHX95153.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC14C]
gi|378237844|gb|EHX97862.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC14D]
gi|378246215|gb|EHY06147.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15A]
gi|378249968|gb|EHY09877.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15D]
gi|378252405|gb|EHY12296.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15C]
gi|378252462|gb|EHY12352.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15B]
gi|378261831|gb|EHY21622.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC15E]
gi|383390217|gb|AFH15175.1| hypothetical protein KO11_00930 [Escherichia coli KO11FL]
gi|383403612|gb|AFH09855.1| hypothetical protein WFL_00930 [Escherichia coli W]
gi|383477561|gb|EID69477.1| Class I peptide chain release factor [Escherichia coli W26]
gi|384472109|gb|EIE56171.1| Class I peptide chain release factor [Escherichia coli AI27]
gi|385705131|gb|EIG42198.1| hypothetical protein ESTG_04349 [Escherichia coli B799]
gi|386145000|gb|EIG91464.1| RF-1 domain protein [Escherichia coli 97.0246]
gi|386150096|gb|EIH01385.1| RF-1 domain protein [Escherichia coli 5.0588]
gi|386154911|gb|EIH11269.1| RF-1 domain protein [Escherichia coli 97.0259]
gi|386169857|gb|EIH36365.1| RF-1 domain protein [Escherichia coli 96.0497]
gi|386170504|gb|EIH42557.1| RF-1 domain protein [Escherichia coli 99.0741]
gi|386177967|gb|EIH55446.1| RF-1 domain protein [Escherichia coli 3.2608]
gi|386184791|gb|EIH67527.1| RF-1 domain protein [Escherichia coli 93.0624]
gi|386193439|gb|EIH87723.1| RF-1 domain protein [Escherichia coli JB1-95]
gi|386199879|gb|EIH98870.1| RF-1 domain protein [Escherichia coli 96.154]
gi|386206415|gb|EII10921.1| RF-1 domain protein [Escherichia coli 5.0959]
gi|386216868|gb|EII33357.1| RF-1 domain protein [Escherichia coli 4.0967]
gi|386228735|gb|EII56091.1| RF-1 domain protein [Escherichia coli 3.3884]
gi|386260958|gb|EIJ16426.1| RF-1 domain protein [Escherichia coli 900105 (10e)]
gi|388338078|gb|EIL04555.1| hypothetical protein ECO9340_02809 [Escherichia coli O103:H25 str.
CVM9340]
gi|388340303|gb|EIL06550.1| hypothetical protein ECO9450_22157 [Escherichia coli O103:H2 str.
CVM9450]
gi|388347895|gb|EIL13542.1| hypothetical protein ECO9534_22622 [Escherichia coli O111:H11 str.
CVM9534]
gi|388367145|gb|EIL30840.1| hypothetical protein ECO9942_27002 [Escherichia coli O26:H11 str.
CVM9942]
gi|388369944|gb|EIL33510.1| hypothetical protein ECO9545_20233 [Escherichia coli O111:H11 str.
CVM9545]
gi|388379950|gb|EIL42576.1| class I peptide chain release factor [Escherichia coli O26:H11 str.
CVM10026]
gi|388397181|gb|EIL58210.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 541-15]
gi|388403373|gb|EIL63900.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 541-1]
gi|388414473|gb|EIL74430.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli CUMT8]
gi|390778123|gb|EIO45881.1| aminoacyl-tRNA hydrolase [Escherichia coli TW06591]
gi|391310181|gb|EIQ67837.1| putative-tRNA hydrolase domain protein [Escherichia coli EPECa12]
gi|391315757|gb|EIQ73281.1| putative-tRNA hydrolase domain protein [Escherichia coli EPEC
C342-62]
gi|394394931|gb|EJE71447.1| hypothetical protein ECO10224_16690 [Escherichia coli O26:H11 str.
CVM10224]
gi|394412941|gb|EJE87027.1| hypothetical protein ECO10021_16246 [Escherichia coli O26:H11 str.
CVM10021]
gi|394417671|gb|EJE91388.1| hypothetical protein ECO9553_12075 [Escherichia coli O111:H11 str.
CVM9553]
gi|394421036|gb|EJE94531.1| hypothetical protein ECO9455_01825 [Escherichia coli O111:H11 str.
CVM9455]
gi|394427697|gb|EJF00350.1| hypothetical protein ECO9952_03986 [Escherichia coli O26:H11 str.
CVM9952]
gi|394431392|gb|EJF03600.1| hypothetical protein ECO10030_10517 [Escherichia coli O26:H11 str.
CVM10030]
gi|397787197|gb|EJK98026.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_O31]
gi|406779339|gb|AFS58763.1| hypothetical protein O3M_20510 [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055934|gb|AFS75985.1| hypothetical protein O3K_20610 [Escherichia coli O104:H4 str.
2011C-3493]
gi|407063681|gb|AFS84728.1| hypothetical protein O3O_04770 [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408175531|gb|EKI02433.1| aminoacyl-tRNA hydrolase [Escherichia coli 5905]
gi|408193790|gb|EKI19308.1| aminoacyl-tRNA hydrolase [Escherichia coli 5412]
gi|408219818|gb|EKI43936.1| aminoacyl-tRNA hydrolase [Escherichia coli 3006]
gi|408311134|gb|EKJ28146.1| aminoacyl-tRNA hydrolase [Escherichia coli EC1865]
gi|408348592|gb|EKJ62688.1| aminoacyl-tRNA hydrolase [Escherichia coli 0.1288]
gi|412961447|emb|CCK45352.1| hypothetical protein BN16_06631 [Escherichia coli chi7122]
gi|412968049|emb|CCJ42662.1| hypothetical protein BN17_46151 [Escherichia coli]
gi|421947749|gb|EKU04812.1| hypothetical protein CFSAN001629_01971 [Escherichia coli O26:H11
str. CFSAN001629]
gi|421949551|gb|EKU06485.1| hypothetical protein CFSAN001630_04029 [Escherichia coli O111:H11
str. CFSAN001630]
gi|429352521|gb|EKY89236.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02030]
gi|429353577|gb|EKY90285.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354075|gb|EKY90780.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02092]
gi|429367565|gb|EKZ04159.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02093]
gi|429368717|gb|EKZ05303.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02281]
gi|429370943|gb|EKZ07506.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02318]
gi|429383317|gb|EKZ19778.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-02913]
gi|429386166|gb|EKZ22616.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-03439]
gi|429387079|gb|EKZ23524.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-03943]
gi|429398339|gb|EKZ34682.1| ribosome-associated protein [Escherichia coli O104:H4 str.
11-04080]
gi|429400055|gb|EKZ36373.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429400389|gb|EKZ36706.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429411480|gb|EKZ47690.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429413052|gb|EKZ49242.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429420104|gb|EKZ56238.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429423966|gb|EKZ60073.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429430123|gb|EKZ66190.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429436065|gb|EKZ72082.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429443249|gb|EKZ79202.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429445671|gb|EKZ81612.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429452140|gb|EKZ88027.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456991|gb|EKZ92834.1| ribosome-associated protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430889845|gb|ELC12505.1| ribosome-associated protein [Escherichia coli KTE10]
gi|430894417|gb|ELC16706.1| ribosome-associated protein [Escherichia coli KTE12]
gi|431011654|gb|ELD25729.1| ribosome-associated protein [Escherichia coli KTE210]
gi|431020059|gb|ELD33450.1| ribosome-associated protein [Escherichia coli KTE212]
gi|431057831|gb|ELD67249.1| ribosome-associated protein [Escherichia coli KTE233]
gi|431064887|gb|ELD73745.1| ribosome-associated protein [Escherichia coli KTE234]
gi|431158703|gb|ELE59301.1| ribosome-associated protein [Escherichia coli KTE75]
gi|431207970|gb|ELF06200.1| ribosome-associated protein [Escherichia coli KTE142]
gi|431214719|gb|ELF12473.1| ribosome-associated protein [Escherichia coli KTE119]
gi|431225561|gb|ELF22761.1| ribosome-associated protein [Escherichia coli KTE143]
gi|431314550|gb|ELG02502.1| ribosome-associated protein [Escherichia coli KTE48]
gi|431380832|gb|ELG65471.1| ribosome-associated protein [Escherichia coli KTE135]
gi|431389392|gb|ELG73105.1| ribosome-associated protein [Escherichia coli KTE136]
gi|431406080|gb|ELG89312.1| ribosome-associated protein [Escherichia coli KTE147]
gi|431475694|gb|ELH55498.1| ribosome-associated protein [Escherichia coli KTE203]
gi|431616312|gb|ELI85379.1| ribosome-associated protein [Escherichia coli KTE138]
gi|431652373|gb|ELJ19527.1| ribosome-associated protein [Escherichia coli KTE163]
gi|431663950|gb|ELJ30702.1| ribosome-associated protein [Escherichia coli KTE166]
gi|431697262|gb|ELJ62407.1| ribosome-associated protein [Escherichia coli KTE232]
gi|443420711|gb|AGC85615.1| hypothetical protein APECO78_04390 [Escherichia coli APEC O78]
gi|449323650|gb|EMD13603.1| hypothetical protein C202_00915 [Escherichia coli O08]
Length = 140
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|399519774|ref|ZP_10760565.1| Protein chain release factor B [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399112171|emb|CCH37124.1| Protein chain release factor B [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 139
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++T R+ G GGQ+VN VS+ V +RF A++ L K++L+ L +R+ DG +I
Sbjct: 15 DEIELTAIRAQGAGGQNVNKVSSAVHLRFDSQASS-LPPFYKERLLTLADSRITADGVVI 73
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
IK+ + R+Q+ N ADA+ L +I A K Q
Sbjct: 74 IKAQQCRTQEQNRADALERLAELIRSAGKVEKQ 106
>gi|160897934|ref|YP_001563516.1| class I peptide chain release factor [Delftia acidovorans SPH-1]
gi|160363518|gb|ABX35131.1| Class I peptide chain release factor [Delftia acidovorans SPH-1]
Length = 132
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+ T +R+ G GGQ+VN VS+ V +RF V A+ L E V+++L+ L R+ +G ++
Sbjct: 7 HEVQWTATRAQGAGGQNVNKVSSAVHLRFDVRASR-LPEAVQQRLLALRDGRITNEGVVV 65
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
IK+ + R+Q+ NL A+ L N++ AA P P + T
Sbjct: 66 IKAQQHRTQEQNLRAALQRL-NVLVAAAYPEPILRRAT 102
>gi|417688003|ref|ZP_12337254.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 5216-82]
gi|332095133|gb|EGJ00165.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii 5216-82]
Length = 140
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|190889679|ref|YP_001976221.1| peptidyl-tRNA hydrolase domain-containing protein [Rhizobium etli
CIAT 652]
gi|190694958|gb|ACE89043.1| probable peptide chain release factor protein (peptidyl-tRNA
hydrolase protein) [Rhizobium etli CIAT 652]
Length = 145
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LN+ VK I L R++KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNLANSPSLNDRVKANAIRLAGRRMSKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARERLKELILEAA 104
>gi|24111627|ref|NP_706137.1| hypothetical protein SF0182 [Shigella flexneri 2a str. 301]
gi|30061748|ref|NP_835919.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
2457T]
gi|110804243|ref|YP_687763.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella
flexneri 5 str. 8401]
gi|384541763|ref|YP_005725824.1| Peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2002017]
gi|415859669|ref|ZP_11533868.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
2457T]
gi|417700088|ref|ZP_12349236.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-218]
gi|417721176|ref|ZP_12370030.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-304]
gi|417726540|ref|ZP_12375290.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-671]
gi|417731629|ref|ZP_12380303.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2747-71]
gi|417737027|ref|ZP_12385640.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 4343-70]
gi|417741677|ref|ZP_12390233.1| putative-tRNA hydrolase domain protein [Shigella flexneri 2930-71]
gi|418252932|ref|ZP_12878354.1| putative-tRNA hydrolase domain protein [Shigella flexneri 6603-63]
gi|420318668|ref|ZP_14820528.1| putative-tRNA hydrolase domain protein [Shigella flexneri 2850-71]
gi|420339662|ref|ZP_14841199.1| putative-tRNA hydrolase domain protein [Shigella flexneri K-404]
gi|424836711|ref|ZP_18261348.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella
flexneri 5a str. M90T]
gi|425303704|ref|ZP_18693519.1| hypothetical protein ECN1_0177 [Escherichia coli N1]
gi|24050398|gb|AAN41844.1| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30039990|gb|AAP15724.1| hypothetical protein S0184 [Shigella flexneri 2a str. 2457T]
gi|110613791|gb|ABF02458.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281599547|gb|ADA72531.1| Peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2002017]
gi|313646747|gb|EFS11206.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2a str.
2457T]
gi|332762021|gb|EGJ92292.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 2747-71]
gi|332762196|gb|EGJ92465.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri 4343-70]
gi|332765041|gb|EGJ95269.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-671]
gi|332768695|gb|EGJ98875.1| putative-tRNA hydrolase domain protein [Shigella flexneri 2930-71]
gi|333009346|gb|EGK28802.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-218]
gi|333022233|gb|EGK41472.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-304]
gi|383465763|gb|EID60784.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella
flexneri 5a str. M90T]
gi|391255511|gb|EIQ14659.1| putative-tRNA hydrolase domain protein [Shigella flexneri 2850-71]
gi|391275205|gb|EIQ33998.1| putative-tRNA hydrolase domain protein [Shigella flexneri K-404]
gi|397901999|gb|EJL18335.1| putative-tRNA hydrolase domain protein [Shigella flexneri 6603-63]
gi|408232755|gb|EKI55923.1| hypothetical protein ECN1_0177 [Escherichia coli N1]
Length = 140
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|340027995|ref|ZP_08664058.1| hypothetical protein PaTRP_04702 [Paracoccus sp. TRP]
Length = 143
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +SRS GPGGQ+VN V T V++RF+ + L VK +L L R +DG ++I
Sbjct: 14 ELSEQFSRSQGPGGQNVNKVETAVELRFEAERSPHLTPPVKARLKRLAGRRWTQDGAVLI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+++ TRSQ N A L +I +A
Sbjct: 74 RAEETRSQARNREMARERLAELIRQA 99
>gi|302819649|ref|XP_002991494.1| hypothetical protein SELMODRAFT_133691 [Selaginella moellendorffii]
gi|300140696|gb|EFJ07416.1| hypothetical protein SELMODRAFT_133691 [Selaginella moellendorffii]
Length = 117
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 18/93 (19%)
Query: 85 EELDITYSRSSGPGGQHVN------------------SVSTKVDIRFKVNAANWLNEDVK 126
+ + ++++RS G GGQ+VN +V+TKVD+RF V A+WL V+
Sbjct: 1 DHVTVSFARSGGAGGQNVNKGLIFSVFGTLVIGISSLTVNTKVDMRFNVVNAHWLPLQVR 60
Query: 127 KQLIELNKNRLNKDGYLIIKSDRTRSQQLNLAD 159
+L++ KNR+N DG L+I S RTR+Q D
Sbjct: 61 NKLLQTEKNRINSDGELVISSTRTRTQNAAAED 93
>gi|420369779|ref|ZP_14870446.1| putative-tRNA hydrolase domain protein [Shigella flexneri 1235-66]
gi|391320903|gb|EIQ77684.1| putative-tRNA hydrolase domain protein [Shigella flexneri 1235-66]
Length = 140
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG ++IK+ RSQ+LN A+ L
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARL 91
>gi|254444270|ref|ZP_05057746.1| hypothetical protein VDG1235_2509 [Verrucomicrobiae bacterium
DG1235]
gi|198258578|gb|EDY82886.1| hypothetical protein VDG1235_2509 [Verrucomicrobiae bacterium
DG1235]
Length = 139
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I RS G GGQ+VN VST + + F + A++ L E VK++L+ + +R+ ++G ++I
Sbjct: 14 EIEIKAMRSQGSGGQNVNKVSTAIHLFFDIRASS-LPERVKERLLARSDHRITEEGIVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
KS +RSQ+ N A+ LR ++ A
Sbjct: 73 KSQESRSQEANREAALARLRELVAGA 98
>gi|320353285|ref|YP_004194624.1| class I peptide chain release factor [Desulfobulbus propionicus DSM
2032]
gi|320121787|gb|ADW17333.1| Class I peptide chain release factor [Desulfobulbus propionicus DSM
2032]
Length = 138
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 72 VIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
IP+ P S E+++T R+ G GGQ+VN VS V +RF + A++ L E +K +L+
Sbjct: 3 TIPIT-PTLSIDAAEIELTAIRAQGSGGQNVNKVSNAVHLRFDIRASS-LPETIKARLLA 60
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L+ RL +DG L+IK+ RS + N A+ L +I A
Sbjct: 61 LHDQRLTEDGVLVIKAQEFRSLEKNREAAVERLLELIRAA 100
>gi|253995820|ref|YP_003047884.1| class I peptide chain release factor [Methylotenera mobilis JLW8]
gi|253982499|gb|ACT47357.1| Class I peptide chain release factor [Methylotenera mobilis JLW8]
Length = 134
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+ IP Y ++T R+ G GGQ+VN VS+ + +RF ++A++ L++ +K++L+ L
Sbjct: 4 IQIPESDY-----ELTAIRAQGAGGQNVNKVSSAIHLRFDIHASS-LSDWLKERLLHLKD 57
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
NR+N DG L+IK+ + R+Q+ N DA+ L + A + P
Sbjct: 58 NRINDDGVLVIKAQQYRTQEANKKDAVQRLHEITNAANQVKP 99
>gi|212213084|ref|YP_002304020.1| peptidyl-tRNA hydrolase domain protein [Coxiella burnetii
CbuG_Q212]
gi|212011494|gb|ACJ18875.1| peptidyl-tRNA hydrolase family protein [Coxiella burnetii
CbuG_Q212]
Length = 112
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+SGPGGQ VN ++T +RF V ++ L E++K++L+ + NR+N +G L+I
Sbjct: 8 EVEWRFIRASGPGGQKVNKIATAAQLRFNVPKSS-LPEEIKERLVAIAGNRINTEGELVI 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
R R+Q+ N DA+ L + + AA+
Sbjct: 67 TGRRYRTQKQNRQDALERLIHFVELAAQ 94
>gi|374261462|ref|ZP_09620044.1| hypothetical protein LDG_6432 [Legionella drancourtii LLAP12]
gi|363538089|gb|EHL31501.1| hypothetical protein LDG_6432 [Legionella drancourtii LLAP12]
Length = 136
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 93 RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRS 152
R+ G GGQ+VN VST + +RF + +N L+++ K +L++L NR+ DG +IIK+ + RS
Sbjct: 21 RAQGAGGQNVNKVSTAIHLRFSLAQSN-LSDEYKLRLMQLKDNRITADGMIIIKAQKYRS 79
Query: 153 QQLNLADAMTTLRNMIWKAA 172
Q+ N DA+ L +I K +
Sbjct: 80 QEKNRTDALARLVELIKKVS 99
>gi|264679442|ref|YP_003279349.1| class I peptide chain release factor [Comamonas testosteroni CNB-2]
gi|299530525|ref|ZP_07043945.1| Class I peptide chain release factor [Comamonas testosteroni S44]
gi|262209955|gb|ACY34053.1| Class I peptide chain release factor [Comamonas testosteroni CNB-2]
gi|298721501|gb|EFI62438.1| Class I peptide chain release factor [Comamonas testosteroni S44]
Length = 136
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 86 ELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
E D+ +S R+ GPGGQ+VN V++ V +RF V A+ L DV+++L+ L +R+ DG +
Sbjct: 11 EADVQWSAVRAQGPGGQNVNKVASAVHLRFDVRASR-LPVDVQQRLLALGDSRITTDGVV 69
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMI 168
+IK+ + R+Q+ NL D + L ++
Sbjct: 70 VIKAQKYRTQEHNLWDGLQRLNALV 94
>gi|440740883|ref|ZP_20920355.1| hypothetical protein A986_21240 [Pseudomonas fluorescens BRIP34879]
gi|440375573|gb|ELQ12277.1| hypothetical protein A986_21240 [Pseudomonas fluorescens BRIP34879]
Length = 137
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + ++ L E K++L+ L +R+ DG L++
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPGSS-LPEFYKERLLALRDSRITGDGVLVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELIQSATK 100
>gi|158521736|ref|YP_001529606.1| class I peptide chain release factor [Desulfococcus oleovorans
Hxd3]
gi|158510562|gb|ABW67529.1| Class I peptide chain release factor [Desulfococcus oleovorans
Hxd3]
Length = 140
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + R+SGPGGQ+VN V++ V +RF V + L VK +LI+L R++++G L+I
Sbjct: 14 ELTFKFIRASGPGGQNVNKVASAVQLRFDVAHSPSLPGPVKNRLIKLAGRRISEEGVLVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
++ R R Q N DA+ L ++ +A
Sbjct: 74 EAKRFREQGKNRQDAIDRLVALVARA 99
>gi|407068260|ref|ZP_11099098.1| Similar to Protein chain release factor B [Vibrio cyclitrophicus
ZF14]
Length = 136
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ +T R+ G GGQ+VN VS+ + +RF +N + L + K++L+ NR+ KDG +II
Sbjct: 14 EIQLTAIRAQGAGGQNVNKVSSAIHLRFDINHST-LPDFYKEKLLAHKDNRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I +A K
Sbjct: 73 KAQQYRTQEQNRDDALVRLKELILEATK 100
>gi|392977696|ref|YP_006476284.1| hypothetical protein A3UG_04175 [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392323629|gb|AFM58582.1| hypothetical protein A3UG_04175 [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 140
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+V+PR I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ +
Sbjct: 2 IVLPRNVSIPDNELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKESLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ + DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLITSDGVIVIKAQEYRSQELNREAAIARLVAVI 95
>gi|417106610|ref|ZP_11962280.1| putative peptide chain release factor protein (peptidyl-tRNA
hydrolase protein) [Rhizobium etli CNPAF512]
gi|327189995|gb|EGE57117.1| putative peptide chain release factor protein (peptidyl-tRNA
hydrolase protein) [Rhizobium etli CNPAF512]
Length = 145
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LN+ VK I L RL+KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNLANSPSLNDRVKANAIRLAGRRLSKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I AA
Sbjct: 78 EASRFRSQDRNREDARERLKELILDAA 104
>gi|209551542|ref|YP_002283459.1| peptidyl-tRNA hydrolase domain-containing protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424916187|ref|ZP_18339551.1| protein chain release factor B [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209537298|gb|ACI57233.1| Class I peptide chain release factor [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392852363|gb|EJB04884.1| protein chain release factor B [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 146
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LN+ VK ++L R++KDG L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIPNSPSLNDRVKTNAVKLAGRRMSKDGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARERLKELILEAA 104
>gi|300121717|emb|CBK22292.2| unnamed protein product [Blastocystis hominis]
Length = 179
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E + +++ RS GGQ+VN V+TKV+ RF V AA WL EDVK +L+ KN +N G L+
Sbjct: 33 ECIQLSFVRSPVLGGQNVNKVNTKVEARFNVQAATWLPEDVKNRLLSQEKNLINTKGELV 92
Query: 145 IKSDRTRSQQLN 156
I RSQ N
Sbjct: 93 ITCSEERSQNKN 104
>gi|254464052|ref|ZP_05077463.1| class I peptide chain release factor [Rhodobacterales bacterium
Y4I]
gi|206684960|gb|EDZ45442.1| class I peptide chain release factor [Rhodobacterales bacterium
Y4I]
Length = 139
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ ++ R+SGPGGQ+VN V+T V++RF+ + L VK +L L R KDG +I+
Sbjct: 14 EMTESFIRASGPGGQNVNKVATAVELRFEAERSPSLTPAVKSRLKRLAGRRWTKDGAIIL 73
Query: 146 KSDRTRSQQLN 156
+ D TRSQQ N
Sbjct: 74 QCDETRSQQRN 84
>gi|434394910|ref|YP_007129857.1| Class I peptide chain release factor [Gloeocapsa sp. PCC 7428]
gi|428266751|gb|AFZ32697.1| Class I peptide chain release factor [Gloeocapsa sp. PCC 7428]
Length = 137
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ RS G GGQ+VN V+T + +RF + A++ L + K++L++LN R+ K+G ++I
Sbjct: 14 EIEISAVRSQGSGGQNVNKVATAIHLRFDILASS-LPDIYKERLLKLNDQRITKEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIW 169
K+ RSQ+ N +A+ L+ +I
Sbjct: 73 KAQEHRSQEQNREEALKRLQELIQ 96
>gi|392309981|ref|ZP_10272515.1| hypothetical protein PcitN1_15124 [Pseudoalteromonas citrea NCIMB
1889]
Length = 137
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + ++F + ++ L E K +L+ L +RL KDG ++I
Sbjct: 14 EIEMTAIRAQGAGGQNVNKVSSAIHLKFDIKRSS-LPEFYKARLLALKDSRLTKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q++N +A+T L+ +I A K
Sbjct: 73 KAQSHRTQEMNKEEALTRLKALILDATK 100
>gi|238751427|ref|ZP_04612919.1| hypothetical protein yrohd0001_19870 [Yersinia rohdei ATCC 43380]
gi|238710294|gb|EEQ02520.1| hypothetical protein yrohd0001_19870 [Yersinia rohdei ATCC 43380]
Length = 131
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T RS G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 7 EIELTAIRSQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLMTAEGVIII 65
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 66 KAQEYRSQDMNREAALARLVALIRQA 91
>gi|326797213|ref|YP_004315033.1| class I peptide chain release factor [Marinomonas mediterranea
MMB-1]
gi|326547977|gb|ADZ93197.1| Class I peptide chain release factor [Marinomonas mediterranea
MMB-1]
Length = 138
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+ +T R+ G GGQ+VN VS+ + +RF + A++ L K++L+ L+ R+ K+G +I
Sbjct: 14 HEIQLTAIRAQGAGGQNVNKVSSAIHLRFDIRASS-LPGFYKERLLALSDTRITKEGEII 72
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+LN DA+ L+ +I A +
Sbjct: 73 IKAQQHRTQELNREDALERLKALILSATR 101
>gi|109899145|ref|YP_662400.1| class I peptide chain release factor [Pseudoalteromonas atlantica
T6c]
gi|109701426|gb|ABG41346.1| Class I peptide chain release factor [Pseudoalteromonas atlantica
T6c]
Length = 137
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 81 SYIT---EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
SYI+ E+++T R+ G GGQ+VN VS+ + +RF + A++ L K+QL+ N R+
Sbjct: 6 SYISLQDHEVELTAIRAQGAGGQNVNKVSSAIHLRFDIKASS-LPAFYKEQLLNSNDKRI 64
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG L++K+ R+Q++N DA+ L ++ AA
Sbjct: 65 TQDGILVLKAQAHRTQEMNRQDALERLAAIVRDAA 99
>gi|238759925|ref|ZP_04621079.1| hypothetical protein yaldo0001_6820 [Yersinia aldovae ATCC 35236]
gi|238701832|gb|EEP94395.1| hypothetical protein yaldo0001_6820 [Yersinia aldovae ATCC 35236]
Length = 138
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + DG +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLVTADGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 73 KAQEYRSQDMNREAALARLVALIRQA 98
>gi|167836133|ref|ZP_02463016.1| hypothetical protein Bpse38_06546 [Burkholderia thailandensis
MSMB43]
gi|424903913|ref|ZP_18327423.1| hypothetical protein A33K_15309 [Burkholderia thailandensis MSMB43]
gi|390929891|gb|EIP87293.1| hypothetical protein A33K_15309 [Burkholderia thailandensis MSMB43]
Length = 134
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+++ +E+++T R+ G GGQ+VN VS+ + +RF + ++ L +DVK +L+ R+
Sbjct: 4 RYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRTSS-LPDDVKARLLARADQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
++G ++IK+ R+Q+ N A A+ L +I A P +IS
Sbjct: 63 REGVVVIKAQEYRTQEKNRAAALARLDTLIRSAGVAPRKRIS 104
>gi|441502503|ref|ZP_20984513.1| Putative protein YaeJ [Photobacterium sp. AK15]
gi|441429681|gb|ELR67133.1| Putative protein YaeJ [Photobacterium sp. AK15]
Length = 137
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ R+ G GGQ+VN VS+ + +RF + + L K++L++LN +R+ KDG +II
Sbjct: 14 EIEISAIRAQGAGGQNVNKVSSAIHLRFDIKRST-LPAFYKERLLKLNDHRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ + R+Q+ N DA++ L+ +I A
Sbjct: 73 KAQQYRTQEQNKEDALSRLKELIKSA 98
>gi|432753018|ref|ZP_19987589.1| ribosome-associated protein [Escherichia coli KTE29]
gi|431291676|gb|ELF82179.1| ribosome-associated protein [Escherichia coli KTE29]
Length = 140
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG ++IK+ RSQ+LN A+ L
Sbjct: 61 NHLISSDGVIVIKAQEYRSQELNREAALARL 91
>gi|407713072|ref|YP_006833637.1| ribosome-associated protein [Burkholderia phenoliruptrix BR3459a]
gi|407235256|gb|AFT85455.1| ribosome-associated protein [Burkholderia phenoliruptrix BR3459a]
Length = 140
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
++ R+S + E+++T R+ G GGQ+VN VS+ + +RF V A++ L + +K +L+ L
Sbjct: 6 IMTSRYSIPSNEIELTAVRAQGAGGQNVNKVSSAIQLRFDVRASS-LPDVLKMRLLALPD 64
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ ++G ++IK+ R+Q+LN A A+ L ++
Sbjct: 65 RRITREGVVVIKAQEHRTQELNRAAALARLDELV 98
>gi|152982335|ref|YP_001351732.1| hypothetical protein mma_0042 [Janthinobacterium sp. Marseille]
gi|151282412|gb|ABR90822.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 136
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 64/95 (67%), Gaps = 8/95 (8%)
Query: 82 YITE-------ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
YIT+ E+ ++ R+ GPGGQ+VN V+T + +RF + A++ L + +K++L++L+
Sbjct: 2 YITDAISVDDSEIVLSAVRAQGPGGQNVNKVATAIHLRFDIGASS-LPDYLKERLLQLSD 60
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
R++KDG ++IK+ + RSQ+ + +A+ L+ +I
Sbjct: 61 QRISKDGVVVIKAQQGRSQEQSREEALRRLQELIL 95
>gi|171057607|ref|YP_001789956.1| class I peptide chain release factor [Leptothrix cholodnii SP-6]
gi|170775052|gb|ACB33191.1| Class I peptide chain release factor [Leptothrix cholodnii SP-6]
Length = 136
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ T R+ G GGQ+VN VS V +R+ ++A++ L ++VK++L+ L +R+ +DG ++I
Sbjct: 10 EVHCTAIRAQGAGGQNVNKVSNAVHLRYDIHASS-LPDEVKERLLALPDHRITRDGVVVI 68
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ +RS + N A+ L+ MI +AA
Sbjct: 69 KAQESRSLEANREHALARLQTMIDQAA 95
>gi|78189291|ref|YP_379629.1| peptidyl-tRNA hydrolase domain-containing protein [Chlorobium
chlorochromatii CaD3]
gi|78171490|gb|ABB28586.1| release factors family protein [Chlorobium chlorochromatii CaD3]
Length = 137
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+++ RS G GGQ+VN V T V +RF + A++ N D+K++L+ N +RL K+G +I
Sbjct: 13 EEIELQTMRSQGAGGQNVNKVETAVHLRFSILASSLPN-DLKQKLLSRNDHRLTKEGIII 71
Query: 145 IKSDRTRSQQLN 156
IK+ R RSQ+ N
Sbjct: 72 IKAQRYRSQEKN 83
>gi|296101362|ref|YP_003611508.1| peptidyl-tRNA hydrolase domain-containing protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295055821|gb|ADF60559.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 140
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ + + + DG ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKESLLAASHHLITSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN AM L +I
Sbjct: 73 KAQEYRSQELNREAAMARLVAVI 95
>gi|17988321|ref|NP_540955.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella
melitensis bv. 1 str. 16M]
gi|82700843|ref|YP_415417.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|161620001|ref|YP_001593888.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella canis
ATCC 23365]
gi|163844107|ref|YP_001628511.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella suis
ATCC 23445]
gi|189025145|ref|YP_001935913.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella abortus
S19]
gi|225853519|ref|YP_002733752.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella
melitensis ATCC 23457]
gi|260562993|ref|ZP_05833479.1| class I peptide chain release factor domain-containing protein
[Brucella melitensis bv. 1 str. 16M]
gi|265992113|ref|ZP_06104670.1| class I peptide chain release factor [Brucella melitensis bv. 1
str. Rev.1]
gi|306837664|ref|ZP_07470533.1| peptidyl-tRNA hydrolase domain protein [Brucella sp. NF 2653]
gi|306843507|ref|ZP_07476108.1| peptidyl-tRNA hydrolase domain protein [Brucella inopinata BO1]
gi|376272193|ref|YP_005150771.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella abortus
A13334]
gi|376275323|ref|YP_005115762.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella canis
HSK A52141]
gi|384409539|ref|YP_005598160.1| Class I peptide chain release factor domain protein [Brucella
melitensis M28]
gi|384446077|ref|YP_005604796.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella
melitensis NI]
gi|17984095|gb|AAL53219.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|82616944|emb|CAJ12045.1| Class I peptide chain release factor domain [Brucella melitensis
biovar Abortus 2308]
gi|161336812|gb|ABX63117.1| hypothetical protein BCAN_A2134 [Brucella canis ATCC 23365]
gi|163674830|gb|ABY38941.1| hypothetical protein BSUIS_A1930 [Brucella suis ATCC 23445]
gi|189020717|gb|ACD73439.1| Class I peptide chain release factor domain protein [Brucella
abortus S19]
gi|225641884|gb|ACO01798.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|260153009|gb|EEW88101.1| class I peptide chain release factor domain-containing protein
[Brucella melitensis bv. 1 str. 16M]
gi|263003179|gb|EEZ15472.1| class I peptide chain release factor [Brucella melitensis bv. 1
str. Rev.1]
gi|306276198|gb|EFM57898.1| peptidyl-tRNA hydrolase domain protein [Brucella inopinata BO1]
gi|306407222|gb|EFM63432.1| peptidyl-tRNA hydrolase domain protein [Brucella sp. NF 2653]
gi|326410086|gb|ADZ67151.1| Class I peptide chain release factor domain protein [Brucella
melitensis M28]
gi|349744066|gb|AEQ09609.1| peptidyl-tRNA hydrolase domain protein [Brucella melitensis NI]
gi|363399799|gb|AEW16769.1| peptidyl-tRNA hydrolase domain protein [Brucella abortus A13334]
gi|363403890|gb|AEW14185.1| peptidyl-tRNA hydrolase domain protein [Brucella canis HSK A52141]
Length = 145
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++L+ + R+SGPGGQ+VN VST V +RF A + L ED+ +L +L
Sbjct: 10 ITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHA-ARSGLPEDILSRLFKLAGQ 68
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ KDG ++I+++R R+Q+ N DA L +I
Sbjct: 69 KGTKDGDILIEANRFRTQERNREDARERLLALI 101
>gi|167562262|ref|ZP_02355178.1| hypothetical protein BoklE_06831 [Burkholderia oklahomensis EO147]
gi|167569503|ref|ZP_02362377.1| hypothetical protein BoklC_06654 [Burkholderia oklahomensis C6786]
Length = 134
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+++ +E+++ R+ G GGQ+VN VS+ + +RF + A++ L+++VK +L+ + R+
Sbjct: 4 RYAFSPDEVELMAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LSDEVKARLLARSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IK+ R+Q+ N A A+ L +I A
Sbjct: 63 RDGVVVIKAQEYRTQEKNRAAALARLDVLIRSAG 96
>gi|421597599|ref|ZP_16041183.1| hypothetical protein BCCGELA001_09371 [Bradyrhizobium sp.
CCGE-LA001]
gi|404270293|gb|EJZ34389.1| hypothetical protein BCCGELA001_09371 [Bradyrhizobium sp.
CCGE-LA001]
Length = 138
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I + R+SGPGGQ+VN V+T +RF L ED +L + R+ KDG ++
Sbjct: 13 DDIEIGFVRASGPGGQNVNKVATSAQLRFDTRKLT-LPEDAAIRLARIAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQ 177
I + R R+Q+ N DA+ L M+ +A +P P+
Sbjct: 72 IHAQRFRTQERNRQDAIDRLVEMLREAMVRPIPR 105
>gi|386818213|ref|ZP_10105431.1| Class I peptide chain release factor [Thiothrix nivea DSM 5205]
gi|386422789|gb|EIJ36624.1| Class I peptide chain release factor [Thiothrix nivea DSM 5205]
Length = 147
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+D R+ G GGQ+VN VST + +RF + A++ L E K++L+ R++ DG +I
Sbjct: 23 EEIDFQPIRAQGSGGQNVNKVSTAIHLRFDIRASS-LPEIWKEKLLAYPDQRISSDGVII 81
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ SQ+ N ADA+ LR +I A K
Sbjct: 82 IKAQTHNSQEKNRADALERLRQLIVDATK 110
>gi|76811939|ref|YP_332926.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
pseudomallei 1710b]
gi|254261607|ref|ZP_04952661.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1710a]
gi|76581392|gb|ABA50867.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1710b]
gi|254220296|gb|EET09680.1| peptidyl-tRNA hydrolase domain protein [Burkholderia pseudomallei
1710a]
Length = 134
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+++ +E+++T R+ G GGQ+VN VS+ + +RF + A++ L +DVK + R+
Sbjct: 4 RYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPDDVKARFFARADQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
++G ++IK+ R+Q+ N A A+ L +I A
Sbjct: 63 REGVIVIKAQEYRTQEKNRAAALARLDTLIRSAG 96
>gi|62290932|ref|YP_222725.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella abortus
bv. 1 str. 9-941]
gi|225626469|ref|ZP_03784508.1| peptidyl-tRNA hydrolase domain protein [Brucella ceti str. Cudo]
gi|237816440|ref|ZP_04595433.1| peptidyl-tRNA hydrolase domain protein [Brucella abortus str. 2308
A]
gi|256370486|ref|YP_003107997.1| peptidyl-tRNA hydrolase domain protein [Brucella microti CCM 4915]
gi|260546194|ref|ZP_05821934.1| class I peptide chain release factor domain-containing protein
[Brucella abortus NCTC 8038]
gi|260567440|ref|ZP_05837910.1| class I peptide chain release factor domain-containing protein
[Brucella suis bv. 4 str. 40]
gi|260755763|ref|ZP_05868111.1| class I peptide chain release factor [Brucella abortus bv. 6 str.
870]
gi|260758986|ref|ZP_05871334.1| class I peptide chain release factor [Brucella abortus bv. 4 str.
292]
gi|260760710|ref|ZP_05873053.1| class I peptide chain release factor [Brucella abortus bv. 2 str.
86/8/59]
gi|260884787|ref|ZP_05896401.1| class I peptide chain release factor [Brucella abortus bv. 9 str.
C68]
gi|261215039|ref|ZP_05929320.1| class I peptide chain release factor [Brucella abortus bv. 3 str.
Tulya]
gi|261217908|ref|ZP_05932189.1| class I peptide chain release factor [Brucella ceti M13/05/1]
gi|261221138|ref|ZP_05935419.1| class I peptide chain release factor [Brucella ceti B1/94]
gi|261314877|ref|ZP_05954074.1| class I peptide chain release factor [Brucella pinnipedialis
M163/99/10]
gi|261321242|ref|ZP_05960439.1| class I peptide chain release factor [Brucella ceti M644/93/1]
gi|261324029|ref|ZP_05963226.1| class I peptide chain release factor [Brucella neotomae 5K33]
gi|261751230|ref|ZP_05994939.1| class I peptide chain release factor [Brucella suis bv. 5 str. 513]
gi|261755795|ref|ZP_05999504.1| class I peptide chain release factor [Brucella suis bv. 3 str. 686]
gi|261759023|ref|ZP_06002732.1| class I peptide chain release factor domain-containing protein
[Brucella sp. F5/99]
gi|265983106|ref|ZP_06095841.1| class I peptide chain release factor [Brucella sp. 83/13]
gi|265993850|ref|ZP_06106407.1| class I peptide chain release factor [Brucella melitensis bv. 3
str. Ether]
gi|265997098|ref|ZP_06109655.1| class I peptide chain release factor [Brucella ceti M490/95/1]
gi|265999254|ref|ZP_05465531.2| class I peptide chain release factor domain-containing protein
[Brucella melitensis bv. 2 str. 63/9]
gi|294851317|ref|ZP_06791990.1| hypothetical protein BAZG_00217 [Brucella sp. NVSL 07-0026]
gi|297247317|ref|ZP_06931035.1| hypothetical protein BAYG_00216 [Brucella abortus bv. 5 str. B3196]
gi|376281731|ref|YP_005155737.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella suis
VBI22]
gi|384212437|ref|YP_005601521.1| hypothetical protein [Brucella melitensis M5-90]
gi|384225723|ref|YP_005616887.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella suis
1330]
gi|423167948|ref|ZP_17154651.1| hypothetical protein M17_01638 [Brucella abortus bv. 1 str. NI435a]
gi|423169676|ref|ZP_17156351.1| hypothetical protein M19_00209 [Brucella abortus bv. 1 str. NI474]
gi|423175334|ref|ZP_17162003.1| hypothetical protein M1A_02730 [Brucella abortus bv. 1 str. NI486]
gi|423177816|ref|ZP_17164461.1| hypothetical protein M1E_02057 [Brucella abortus bv. 1 str. NI488]
gi|423179109|ref|ZP_17165750.1| hypothetical protein M1G_00209 [Brucella abortus bv. 1 str. NI010]
gi|423182240|ref|ZP_17168877.1| hypothetical protein M1I_00209 [Brucella abortus bv. 1 str. NI016]
gi|423186818|ref|ZP_17173432.1| hypothetical protein M1K_01636 [Brucella abortus bv. 1 str. NI021]
gi|423190746|ref|ZP_17177354.1| hypothetical protein M1M_02426 [Brucella abortus bv. 1 str. NI259]
gi|62197064|gb|AAX75364.1| peptidyl-tRNA hydrolase domain protein [Brucella abortus bv. 1 str.
9-941]
gi|225618126|gb|EEH15169.1| peptidyl-tRNA hydrolase domain protein [Brucella ceti str. Cudo]
gi|237788507|gb|EEP62722.1| peptidyl-tRNA hydrolase domain protein [Brucella abortus str. 2308
A]
gi|256000649|gb|ACU49048.1| Class I peptide chain release factor [Brucella microti CCM 4915]
gi|260096301|gb|EEW80177.1| class I peptide chain release factor domain-containing protein
[Brucella abortus NCTC 8038]
gi|260156958|gb|EEW92038.1| class I peptide chain release factor domain-containing protein
[Brucella suis bv. 4 str. 40]
gi|260669304|gb|EEX56244.1| class I peptide chain release factor [Brucella abortus bv. 4 str.
292]
gi|260671142|gb|EEX57963.1| class I peptide chain release factor [Brucella abortus bv. 2 str.
86/8/59]
gi|260675871|gb|EEX62692.1| class I peptide chain release factor [Brucella abortus bv. 6 str.
870]
gi|260874315|gb|EEX81384.1| class I peptide chain release factor [Brucella abortus bv. 9 str.
C68]
gi|260916646|gb|EEX83507.1| class I peptide chain release factor [Brucella abortus bv. 3 str.
Tulya]
gi|260919722|gb|EEX86375.1| class I peptide chain release factor [Brucella ceti B1/94]
gi|260922997|gb|EEX89565.1| class I peptide chain release factor [Brucella ceti M13/05/1]
gi|261293932|gb|EEX97428.1| class I peptide chain release factor [Brucella ceti M644/93/1]
gi|261300009|gb|EEY03506.1| class I peptide chain release factor [Brucella neotomae 5K33]
gi|261303903|gb|EEY07400.1| class I peptide chain release factor [Brucella pinnipedialis
M163/99/10]
gi|261739007|gb|EEY27003.1| class I peptide chain release factor domain-containing protein
[Brucella sp. F5/99]
gi|261740983|gb|EEY28909.1| class I peptide chain release factor [Brucella suis bv. 5 str. 513]
gi|261745548|gb|EEY33474.1| class I peptide chain release factor [Brucella suis bv. 3 str. 686]
gi|262551566|gb|EEZ07556.1| class I peptide chain release factor [Brucella ceti M490/95/1]
gi|262764831|gb|EEZ10752.1| class I peptide chain release factor [Brucella melitensis bv. 3
str. Ether]
gi|263092872|gb|EEZ17047.1| class I peptide chain release factor domain-containing protein
[Brucella melitensis bv. 2 str. 63/9]
gi|264661698|gb|EEZ31959.1| class I peptide chain release factor [Brucella sp. 83/13]
gi|294819906|gb|EFG36905.1| hypothetical protein BAZG_00217 [Brucella sp. NVSL 07-0026]
gi|297174486|gb|EFH33833.1| hypothetical protein BAYG_00216 [Brucella abortus bv. 5 str. B3196]
gi|326539802|gb|ADZ88017.1| conserved hypothetical protein [Brucella melitensis M5-90]
gi|343383903|gb|AEM19395.1| peptidyl-tRNA hydrolase domain protein [Brucella suis 1330]
gi|358259330|gb|AEU07065.1| peptidyl-tRNA hydrolase domain protein [Brucella suis VBI22]
gi|374535778|gb|EHR07299.1| hypothetical protein M1A_02730 [Brucella abortus bv. 1 str. NI486]
gi|374539697|gb|EHR11200.1| hypothetical protein M17_01638 [Brucella abortus bv. 1 str. NI435a]
gi|374543355|gb|EHR14838.1| hypothetical protein M19_00209 [Brucella abortus bv. 1 str. NI474]
gi|374549018|gb|EHR20464.1| hypothetical protein M1E_02057 [Brucella abortus bv. 1 str. NI488]
gi|374552053|gb|EHR23482.1| hypothetical protein M1I_00209 [Brucella abortus bv. 1 str. NI016]
gi|374552425|gb|EHR23853.1| hypothetical protein M1G_00209 [Brucella abortus bv. 1 str. NI010]
gi|374554516|gb|EHR25927.1| hypothetical protein M1M_02426 [Brucella abortus bv. 1 str. NI259]
gi|374557530|gb|EHR28926.1| hypothetical protein M1K_01636 [Brucella abortus bv. 1 str. NI021]
Length = 149
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++L+ + R+SGPGGQ+VN VST V +RF A + L ED+ +L +L
Sbjct: 14 ITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHA-ARSGLPEDILSRLFKLAGQ 72
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ KDG ++I+++R R+Q+ N DA L +I
Sbjct: 73 KGTKDGDILIEANRFRTQERNREDARERLLALI 105
>gi|23502936|ref|NP_699063.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella suis
1330]
gi|23348970|gb|AAN30978.1| peptidyl-tRNA hydrolase domain protein [Brucella suis 1330]
Length = 178
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++L+ + R+SGPGGQ+VN VST V +RF A + L ED+ +L +L
Sbjct: 43 ITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHA-ARSGLPEDILSRLFKLAGQ 101
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ KDG ++I+++R R+Q+ N DA L +I
Sbjct: 102 KGTKDGDILIEANRFRTQERNREDARERLLALI 134
>gi|54302458|ref|YP_132451.1| hypothetical protein PBPRB0779 [Photobacterium profundum SS9]
gi|46915880|emb|CAG22651.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 137
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++IT RS G GGQ+VN VS+ + +RF + + L + K++L++++ +R+ KDG ++I
Sbjct: 14 EIEITAIRSQGAGGQNVNKVSSAIHLRFDIKRST-LPDFYKERLLKISDHRITKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N DA+ L+ I AA
Sbjct: 73 KAQQYRTQEKNREDALQRLKEFIQAAA 99
>gi|324499968|gb|ADY39999.1| Peptidyl-tRNA hydrolase ICT1 [Ascaris suum]
Length = 129
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 93 RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRS 152
RS GPGGQ+VN V++K +IRF + AA WL+ +++ + +++ G +I++S++TR+
Sbjct: 2 RSRGPGGQNVNMVNSKCEIRFNLKAAEWLSTELRTKFRVKFPRFVSEGGDVIVQSEKTRN 61
Query: 153 QQLNLADAMTTLRNMI 168
Q NL D T LR M+
Sbjct: 62 QADNLDDCFTKLRQML 77
>gi|84687770|ref|ZP_01015641.1| peptidyl-tRNA hydrolase domain protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84664206|gb|EAQ10699.1| peptidyl-tRNA hydrolase domain protein [Rhodobacterales bacterium
HTCC2654]
Length = 137
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VST V++RF+ + L + VK++L L R DG LI+
Sbjct: 14 ELTESFVRASGPGGQNVNKVSTAVELRFEAERSPHLPDPVKRRLKRLAGRRWTTDGALIV 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQI 178
TRSQ N A L MI KA KP +I
Sbjct: 74 FVQDTRSQARNRELAEERLAEMIRKACEKPKRRI 107
>gi|346991932|ref|ZP_08860004.1| hypothetical protein RTW15_03451 [Ruegeria sp. TW15]
Length = 139
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ ++ RSSGPGGQ+VN VST V++RF+ + L + VK +L + R KDG ++I
Sbjct: 14 EMTESFVRSSGPGGQNVNKVSTAVELRFEAARSPSLPDPVKNRLKRIAGRRWTKDGAIVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQIS 179
+ + TRSQ N A L +I +A KP +I+
Sbjct: 74 QCEDTRSQARNREIARARLGELIARALVKPKRRIA 108
>gi|293605771|ref|ZP_06688145.1| peptidyl-tRNA hydrolase domain protein [Achromobacter piechaudii
ATCC 43553]
gi|292815820|gb|EFF74927.1| peptidyl-tRNA hydrolase domain protein [Achromobacter piechaudii
ATCC 43553]
Length = 138
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 81 SYITEELDITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
S +E D+T+S R+ G GGQ+VN VS+ V +RF V A++ L +V+ L ++ +R++
Sbjct: 7 SLYIDERDLTFSMIRAQGAGGQNVNKVSSAVHLRFDVRASH-LPLEVQDALCAVSDHRIS 65
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
K+G ++IKS RSQ+ N A+A+ L M+ A
Sbjct: 66 KEGVIVIKSQSFRSQEKNRAEAIERLVAMVRAA 98
>gi|373489164|ref|ZP_09579827.1| Class I peptide chain release factor [Holophaga foetida DSM 6591]
gi|372004640|gb|EHP05279.1| Class I peptide chain release factor [Holophaga foetida DSM 6591]
Length = 142
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
E L + RS GPGGQ+VN V++KV++R + L+E +L +N+L+ +G
Sbjct: 15 AEALRMKAVRSGGPGGQNVNKVASKVELRVDLTLIEGLSEGALLRLKGRVRNQLDAEGLW 74
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
I+ S RTR Q NL DA T ++ ++ +A K AP I T
Sbjct: 75 IVTSSRTRDQATNLEDARTKIQTIVAEAMK-APMIRHAT 112
>gi|75676731|ref|YP_319152.1| peptidyl-tRNA hydrolase domain-containing protein [Nitrobacter
winogradskyi Nb-255]
gi|74421601|gb|ABA05800.1| class I peptide chain release factor [Nitrobacter winogradskyi
Nb-255]
Length = 139
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++I++ R+SGPGGQ+VN +ST +R+ L D+ +L +L R+ +DG ++I
Sbjct: 14 DIEISFIRASGPGGQNVNKLSTAAQLRYDTRRLT-LAPDIAARLAQLAGQRMTRDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
+ R R+Q+ N ADA L ++ +AA +P P+
Sbjct: 73 HAQRFRTQERNRADATDRLIELLRQAAIRPIPR 105
>gi|408480223|ref|ZP_11186442.1| hypothetical protein PsR81_06667 [Pseudomonas sp. R81]
Length = 137
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L K++L+ L +R+ +G L+I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPAFYKERLLALRDSRITSEGVLVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALARLVELILSATK 100
>gi|254448925|ref|ZP_05062380.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
gi|198261462|gb|EDY85752.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
Length = 140
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 8/108 (7%)
Query: 65 DGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNED 124
D LK + + + + E+D R+ G GGQ+VN V++ + +RF V A + L +
Sbjct: 2 DALKISNNVSIALA-------EIDCQAVRAQGAGGQNVNKVASAIHLRFDV-ARSSLPQF 53
Query: 125 VKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ +L+ LN RL+K+G ++IK+ R R+Q+ N DA+ L+ ++ A
Sbjct: 54 YRDRLLALNDQRLSKEGVIVIKAQRFRTQEKNREDALNRLKRLVQSVA 101
>gi|261338810|ref|ZP_05966668.1| hypothetical protein ENTCAN_05005 [Enterobacter cancerogenus ATCC
35316]
gi|288318633|gb|EFC57571.1| peptidyl-tRNA hydrolase domain protein [Enterobacter cancerogenus
ATCC 35316]
Length = 140
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + + DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKERLLAASHHLITSDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A++ L
Sbjct: 73 KAQEYRSQELNREAALSRL 91
>gi|339501425|ref|YP_004699460.1| Class I peptide chain release factor [Spirochaeta caldaria DSM
7334]
gi|338835774|gb|AEJ20952.1| Class I peptide chain release factor [Spirochaeta caldaria DSM
7334]
Length = 144
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
S I E + +SRS GPGGQ+VN V+++V+IR ++ +++ +++L + R+
Sbjct: 8 SSIEEHAQLRFSRSGGPGGQNVNKVNSRVEIRISIDELQGISDAERQRLTTVLSKRITTQ 67
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G LI+ D RSQ N + A L MI AAK
Sbjct: 68 GELILFVDEERSQLENRSRAFQRLEQMILSAAK 100
>gi|402590970|gb|EJW84900.1| hypothetical protein WUBG_04187 [Wuchereria bancrofti]
Length = 129
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
Query: 93 RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVK----KQLIELNKNRLNKDGYLIIKSD 148
RSSGPGGQ+VN V+TK IRF +N A+WL+ ++K K+ + L L+K ++I SD
Sbjct: 2 RSSGPGGQNVNMVNTKCQIRFNLNEADWLSPEIKEVFRKRFVRL----LSKQNDVVISSD 57
Query: 149 RTRSQQLNLADAMTTLRNMIWKAAK 173
++R Q+ N D L+ M+ + K
Sbjct: 58 KSRIQEENQEDCFEKLQAMLTECNK 82
>gi|154706118|ref|YP_001424982.1| peptidyl-tRNA hydrolase domain protein [Coxiella burnetii Dugway
5J108-111]
gi|165918830|ref|ZP_02218916.1| peptidyl-tRNA hydrolase domain protein [Coxiella burnetii Q321]
gi|154355404|gb|ABS76866.1| peptidyl-tRNA hydrolase family protein [Coxiella burnetii Dugway
5J108-111]
gi|165917462|gb|EDR36066.1| peptidyl-tRNA hydrolase domain protein [Coxiella burnetii Q321]
Length = 131
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+SGPGGQ VN ++T +RF V ++ L E++K++L+ + NR+N +G L+I
Sbjct: 8 EVEWRFIRASGPGGQKVNKIATAAQLRFNVPKSS-LPEEIKERLVAIAGNRINTEGELVI 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
R R+Q+ N DA+ L + + AA+
Sbjct: 67 TGRRYRTQKQNRQDALERLIHFVELAAQ 94
>gi|413963102|ref|ZP_11402329.1| hypothetical protein BURK_024370 [Burkholderia sp. SJ98]
gi|413928934|gb|EKS68222.1| hypothetical protein BURK_024370 [Burkholderia sp. SJ98]
Length = 137
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++T R+ G GGQ+VN VS+ + +RF + ++ L E +K +L+ L+ +R+ ++G ++
Sbjct: 12 DEIELTAVRAQGAGGQNVNKVSSAIHLRFDIRGSS-LPEHIKARLLALSDSRVTREGVIV 70
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
IK+ + R+Q +N A A+ L +I
Sbjct: 71 IKAQQHRTQDMNRAAALARLDELI 94
>gi|170696474|ref|ZP_02887600.1| Class I peptide chain release factor [Burkholderia graminis C4D1M]
gi|170138627|gb|EDT06829.1| Class I peptide chain release factor [Burkholderia graminis C4D1M]
Length = 134
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF V A++ L E +K +L+ L R+ +DG ++I
Sbjct: 11 EVELTAVRAQGAGGQNVNKVSSAIQLRFDVRASS-LPEVLKMRLLALPDRRITRDGVVVI 69
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q+LN A A+ L ++
Sbjct: 70 KAQEHRTQELNRAAALARLDELV 92
>gi|418943189|ref|ZP_13496404.1| hypothetical protein T22_10262, partial [Escherichia coli O157:H43
str. T22]
gi|375321512|gb|EHS67342.1| hypothetical protein T22_10262, partial [Escherichia coli O157:H43
str. T22]
Length = 89
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMT 162
+ ++ DG ++IK+ RSQ+LN A+
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALA 89
>gi|219120729|ref|XP_002181097.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407813|gb|EEC47749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 132
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 55/86 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L+ ++ RS G GGQ+VN V+T V I+ + W+ +V+++L + ++R++K+ YL++
Sbjct: 7 QLEFSFIRSGGAGGQNVNKVNTCVQIKLYLPGMTWVPTEVRQRLEQQQRHRVSKEQYLVM 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+ R+Q N A+ LRNMI +A
Sbjct: 67 QVSEHRTQSANRKTAVDKLRNMIRQA 92
>gi|189347638|ref|YP_001944167.1| class I peptide chain release factor [Chlorobium limicola DSM 245]
gi|189341785|gb|ACD91188.1| Class I peptide chain release factor [Chlorobium limicola DSM 245]
Length = 137
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P E+++ RS G GGQ+VN V T V +RF ++ ++ L E+++++L+++
Sbjct: 4 IAPSIQIPESEIELRPMRSQGAGGQNVNKVETAVHLRFDISLSS-LPEELRERLLQMKDR 62
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+ +G +IIK+ RSQ+ N DAM L+ ++ +A
Sbjct: 63 RITSEGIIIIKAQCFRSQENNREDAMRRLQELLQRA 98
>gi|417705686|ref|ZP_12354761.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri VA-6]
gi|420329322|ref|ZP_14831039.1| putative-tRNA hydrolase domain protein [Shigella flexneri K-1770]
gi|333010687|gb|EGK30120.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri VA-6]
gi|391260948|gb|EIQ19998.1| putative-tRNA hydrolase domain protein [Shigella flexneri K-1770]
Length = 140
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A + L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRAPS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|149912715|ref|ZP_01901249.1| peptidyl-tRNA hydrolase, putative [Roseobacter sp. AzwK-3b]
gi|149813121|gb|EDM72947.1| peptidyl-tRNA hydrolase, putative [Roseobacter sp. AzwK-3b]
Length = 139
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + R+SGPGGQ+VN VST V++RF+ + L + VK++L L R K+G ++I
Sbjct: 13 ELTEQFIRASGPGGQNVNKVSTAVELRFEAERSPHLPDVVKRRLQRLAGRRWTKEGAVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+ + TRSQ N A L +I KA
Sbjct: 73 QVEETRSQARNREIARERLAELIRKA 98
>gi|209917382|ref|YP_002291466.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SE11]
gi|422354173|ref|ZP_16434915.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 117-3]
gi|209910641|dbj|BAG75715.1| conserved hypothetical protein [Escherichia coli SE11]
gi|324017841|gb|EGB87060.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 117-3]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAALARLVAVI 95
>gi|186686372|ref|YP_001869568.1| peptidyl-tRNA hydrolase domain-containing protein [Nostoc
punctiforme PCC 73102]
gi|186468824|gb|ACC84625.1| Class I peptide chain release factor [Nostoc punctiforme PCC 73102]
Length = 138
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V+IP+ +++I+ RS G GGQ+VN VST + +RF + A+ L + K+QL++LN
Sbjct: 8 VIIPQ-----SDIEISAIRSQGAGGQNVNKVSTAIHLRFDI-IASSLPDYYKEQLLKLND 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+ ++G ++IK+ RSQ+ N A+ L+ +I A
Sbjct: 62 RRITQEGVVVIKAQEHRSQENNRESALKRLQELIQSA 98
>gi|393724906|ref|ZP_10344833.1| hypothetical protein SPAM2_14689 [Sphingomonas sp. PAMC 26605]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S ++EL +++R+ GPGGQHVN+ + V +RF V + L + VK +L L +RL +
Sbjct: 10 ISIDSDELQESFTRAGGPGGQHVNTTDSAVLLRFDVANSPSLPDAVKNRLAVLAGSRLTR 69
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+G L+++S+ RSQ LN + L ++ +A
Sbjct: 70 EGVLVLRSEGARSQLLNRQEVRERLIALLREA 101
>gi|402489577|ref|ZP_10836371.1| hypothetical protein RCCGE510_17626 [Rhizobium sp. CCGE 510]
gi|401811369|gb|EJT03737.1| hypothetical protein RCCGE510_17626 [Rhizobium sp. CCGE 510]
Length = 147
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + LN+ VK ++L RL+
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFNIPNSPALNDRVKTNAVKLAGRRLS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+G L+I++ R RSQ N DA L+ +I +AA
Sbjct: 71 KEGVLMIEASRFRSQDRNREDARDRLKELILEAA 104
>gi|332286820|ref|YP_004418731.1| hypothetical protein PT7_3567 [Pusillimonas sp. T7-7]
gi|330430773|gb|AEC22107.1| hypothetical protein PT7_3567 [Pusillimonas sp. T7-7]
Length = 136
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
P S EE+ T RS G GGQ+VN VS+ + +RF + ++ L E +K +L+ L R+
Sbjct: 4 PPISVSEEEIVFTAIRSQGAGGQNVNKVSSAIHLRFSIPDSS-LPEPIKARLLALRDQRI 62
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+G ++IK+ +RSQ+ N A+A+ L+ +I
Sbjct: 63 TAEGVVVIKAQSSRSQEQNKAEAIARLQELI 93
>gi|452125389|ref|ZP_21937973.1| hypothetical protein F783_07580 [Bordetella holmesii F627]
gi|452128797|ref|ZP_21941374.1| hypothetical protein H558_07660 [Bordetella holmesii H558]
gi|451924619|gb|EMD74760.1| hypothetical protein F783_07580 [Bordetella holmesii F627]
gi|451925844|gb|EMD75982.1| hypothetical protein H558_07660 [Bordetella holmesii H558]
Length = 138
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
Y+ E ELD R+ G GGQ+VN V++ V +RF V A+ L ++VK+ ++ L R++KD
Sbjct: 9 YLDERELDFGMIRAQGAGGQNVNKVASAVHLRFDV-PASALPDEVKEAILALADRRISKD 67
Query: 141 GYLIIKSDRTRSQQLNLADAM 161
G LIIK+ RSQ N ADA+
Sbjct: 68 GVLIIKAQAYRSQDKNRADAV 88
>gi|388257734|ref|ZP_10134913.1| peptidyl-tRNA hydrolase domain protein [Cellvibrio sp. BR]
gi|387938901|gb|EIK45453.1| peptidyl-tRNA hydrolase domain protein [Cellvibrio sp. BR]
Length = 139
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+VIP E+++T R+ G GGQ+VN VS+ + +RF + ++ L++ K +L+ L
Sbjct: 8 IVIP-----PSEIELTAMRAQGAGGQNVNKVSSAIHLRFDIPNSS-LSDFCKSRLLALGD 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
R+ DG LIIK+ R+Q+ N DA+ LR +I A K
Sbjct: 62 KRITNDGVLIIKAQTYRTQEQNRDDALVRLREIILGAIK 100
>gi|397166871|ref|ZP_10490315.1| putative-tRNA hydrolase domain protein [Enterobacter radicincitans
DSM 16656]
gi|396091959|gb|EJI89525.1| putative-tRNA hydrolase domain protein [Enterobacter radicincitans
DSM 16656]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I E EL+IT R+ G GGQ+VN ST + +RF + A++ L E K +L+E +
Sbjct: 2 ITISRTVSIAEDELEITAVRAQGAGGQNVNKSSTAIHLRFDIRASS-LPEYYKARLLEAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG+++IK+ RSQ++N A+ L +I
Sbjct: 61 HHLISSDGWVVIKAQEYRSQEMNREAAIARLVELI 95
>gi|424897650|ref|ZP_18321224.1| protein chain release factor B [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393181877|gb|EJC81916.1| protein chain release factor B [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 146
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LN+ VK ++L RL+K+G L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIPNSPSLNDRVKANAVKLAGRRLSKEGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNREDARDRLKELILEAA 104
>gi|392550809|ref|ZP_10297946.1| Protein chain release factor B [Pseudoalteromonas spongiae
UST010723-006]
Length = 136
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T RS G GGQ+VN V+T + +RF + ++ L + K++L+ LN +R+ DG ++I
Sbjct: 14 ELELTAIRSQGSGGQNVNKVATAIHLRFDIKRSS-LPQIYKEKLLALNDSRITNDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
KS R+Q+ N DA+ L+ +I A
Sbjct: 73 KSQSFRTQEQNKQDALDRLKALIQSA 98
>gi|29653774|ref|NP_819466.1| peptidyl-tRNA hydrolase domain-containing protein [Coxiella
burnetii RSA 493]
gi|161831529|ref|YP_001596360.1| peptidyl-tRNA hydrolase domain-containing protein [Coxiella
burnetii RSA 331]
gi|29541037|gb|AAO89980.1| peptidyl-tRNA hydrolase family protein [Coxiella burnetii RSA 493]
gi|161763396|gb|ABX79038.1| peptidyl-tRNA hydrolase domain protein [Coxiella burnetii RSA 331]
Length = 131
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+SGPGGQ VN ++T +RF V ++ L E++K++L+ + NR+N +G L+I
Sbjct: 8 EVEWRFIRASGPGGQKVNKIATAAQLRFNVPKSS-LPEEIKERLVAIAGNRINTEGELVI 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
R R+Q+ N DA+ L + + AA+
Sbjct: 67 TGRRYRTQKQNRQDALERLIHFVKLAAQ 94
>gi|383774352|ref|YP_005453419.1| putative Peptidyl-tRNA hydrolase [Bradyrhizobium sp. S23321]
gi|381362477|dbj|BAL79307.1| putative Peptidyl-tRNA hydrolase [Bradyrhizobium sp. S23321]
Length = 138
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I + R+SGPGGQ+VN V+T +RF L ED +L L R+ KDG ++
Sbjct: 13 DDIEIGFVRASGPGGQNVNKVATSAQLRFDTRKLT-LPEDAVLRLARLAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I++ R R+Q+ N DA+ L ++ +A +P P+
Sbjct: 72 IQAQRFRTQERNRQDAIDRLTEILSEAMIRPKPR 105
>gi|333915771|ref|YP_004489503.1| class I peptide chain release factor [Delftia sp. Cs1-4]
gi|333745971|gb|AEF91148.1| Class I peptide chain release factor [Delftia sp. Cs1-4]
Length = 136
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+ T R+ G GGQ+VN VS+ V +RF V A+ L E V+++L+ L R+ +G ++
Sbjct: 11 HEVQWTAMRAQGAGGQNVNKVSSAVHLRFDVRASR-LPEAVQQRLLALRDGRITNEGVVV 69
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
IK+ + R+Q+ NL A+ L N++ AA P P + T
Sbjct: 70 IKAQQYRTQEQNLRAALQRL-NVLVAAAYPEPILRRAT 106
>gi|422783038|ref|ZP_16835822.1| RF-1 domain-containing protein [Escherichia coli TW10509]
gi|323975640|gb|EGB70736.1| RF-1 domain-containing protein [Escherichia coli TW10509]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAALARLVAVI 95
>gi|326317630|ref|YP_004235302.1| class I peptide chain release factor [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374466|gb|ADX46735.1| Class I peptide chain release factor [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 148
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ +T R+ GPGGQ+VN VS+ V +RF + A+ L EDVK +L+ L R+ + G ++I
Sbjct: 23 EVVLTAMRAQGPGGQNVNKVSSAVQLRFDI-VASSLPEDVKARLLALPDARITQAGVVVI 81
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ + R+Q+ N DA+ L ++
Sbjct: 82 KAQQFRTQEANRMDALLRLDALV 104
>gi|254476928|ref|ZP_05090314.1| peptidyl-tRNA hydrolase domain protein [Ruegeria sp. R11]
gi|214031171|gb|EEB72006.1| peptidyl-tRNA hydrolase domain protein [Ruegeria sp. R11]
Length = 139
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ ++ R+SGPGGQ+VN V+T V++RF+ + L VK +L L R K+G +I+
Sbjct: 14 EMTESFVRASGPGGQNVNKVATAVELRFEAARSPALTAAVKSRLKRLAGRRWTKEGAIIL 73
Query: 146 KSDRTRSQQLN 156
+ D TRSQQ N
Sbjct: 74 QCDETRSQQRN 84
>gi|424100503|ref|ZP_17835712.1| hypothetical protein ECFRIK1990_0177 [Escherichia coli FRIK1990]
gi|424107329|ref|ZP_17841950.1| hypothetical protein EC93001_0288 [Escherichia coli 93-001]
gi|424566748|ref|ZP_18007714.1| hypothetical protein ECEC4448_0177 [Escherichia coli EC4448]
gi|425141655|ref|ZP_18541987.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 10.0869]
gi|425171810|ref|ZP_18570247.1| hypothetical protein ECFDA504_0326 [Escherichia coli FDA504]
gi|425370350|ref|ZP_18755356.1| hypothetical protein ECEC1864_0328 [Escherichia coli EC1864]
gi|390671027|gb|EIN47515.1| hypothetical protein EC93001_0288 [Escherichia coli 93-001]
gi|390674948|gb|EIN51113.1| hypothetical protein ECFRIK1990_0177 [Escherichia coli FRIK1990]
gi|390917757|gb|EIP76174.1| hypothetical protein ECEC4448_0177 [Escherichia coli EC4448]
gi|408103958|gb|EKH36287.1| hypothetical protein ECFDA504_0326 [Escherichia coli FDA504]
gi|408302086|gb|EKJ19635.1| hypothetical protein ECEC1864_0328 [Escherichia coli EC1864]
gi|408605696|gb|EKK79190.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 10.0869]
Length = 134
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++I
Sbjct: 12 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVI 70
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 71 KAQEYRSQELNREAALARLVAVI 93
>gi|416274853|ref|ZP_11643814.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae CDC
74-1112]
gi|320173327|gb|EFW48530.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae CDC
74-1112]
Length = 120
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG + IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIAIKAQEYRSQELNREAALARLVAVI 95
>gi|323525710|ref|YP_004227863.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
gi|323382712|gb|ADX54803.1| Class I peptide chain release factor [Burkholderia sp. CCGE1001]
Length = 134
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R+S + E+++T R+ G GGQ+VN VS+ + +RF V A++ L + +K +L+ L R+
Sbjct: 4 RYSIPSNEIELTAVRAQGAGGQNVNKVSSAIQLRFDVRASS-LPDVLKMRLLALPDRRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
++G ++IK+ R+Q+LN A A+ L ++
Sbjct: 63 REGVVVIKAQEHRTQELNRAAALARLDELV 92
>gi|86355706|ref|YP_467598.1| peptidyl-tRNA hydrolase domain protein [Rhizobium etli CFN 42]
gi|86279808|gb|ABC88871.1| probable peptide chain release factor protein (peptidyl-tRNA
hydrolase protein) [Rhizobium etli CFN 42]
Length = 145
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + + LN+ VK I+L R++K+G L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFNIANSPSLNDRVKANAIKLAGRRMSKEGVLMI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ N DA L+ +I +AA
Sbjct: 78 EASRFRSQDRNRDDARERLKELILEAA 104
>gi|89076334|ref|ZP_01162671.1| hypothetical protein SKA34_10495 [Photobacterium sp. SKA34]
gi|89047966|gb|EAR53556.1| hypothetical protein SKA34_10495 [Photobacterium sp. SKA34]
Length = 137
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF +N ++ L K++L++L+ +R+ KDG ++I
Sbjct: 14 EVELTAIRAQGAGGQNVNKVSSAIHLRFDINRSS-LPGFYKERLLKLSDSRITKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
KS + R+Q++N +A+ L+ +I
Sbjct: 73 KSQQHRTQEMNRDEALARLKTLI 95
>gi|395793997|ref|ZP_10473335.1| hypothetical protein A462_02185 [Pseudomonas sp. Ag1]
gi|421140573|ref|ZP_15600572.1| hypothetical protein MHB_14611 [Pseudomonas fluorescens BBc6R8]
gi|395341828|gb|EJF73631.1| hypothetical protein A462_02185 [Pseudomonas sp. Ag1]
gi|404508176|gb|EKA22147.1| hypothetical protein MHB_14611 [Pseudomonas fluorescens BBc6R8]
Length = 137
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L + K++L+ L R+ +G LI+
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPDFYKERLLALRDTRITSEGVLIL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELILSATK 100
>gi|82703524|ref|YP_413090.1| class I peptide chain release factor [Nitrosospira multiformis ATCC
25196]
gi|82411589|gb|ABB75698.1| Class I peptide chain release factor [Nitrosospira multiformis ATCC
25196]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I R+ G GGQ+VN VS+ V +RF +NA++ L++ K++L++L+ R+ ++G +II
Sbjct: 13 EVEIKAIRAQGAGGQNVNKVSSAVHLRFDINASS-LSDIHKERLLKLHDQRITREGVIII 71
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ + RSQ+ N +A+ L ++
Sbjct: 72 KAQQYRSQEKNREEALRRLHELV 94
>gi|359459970|ref|ZP_09248533.1| class I peptide chain release factor [Acaryochloris sp. CCMEE 5410]
Length = 141
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S E++++ RS G GGQ+VN V++ + +RF +NA++ L+ K++L+ L
Sbjct: 4 ITQRTSIPLNEIELSSIRSQGAGGQNVNKVASAIHLRFDINASS-LSPLYKERLLNLGDR 62
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
R+ K+G +IIK+ + R+QQ N DA+ L+ ++
Sbjct: 63 RITKEGIIIIKAQQHRTQQQNREDALNRLQTLLQ 96
>gi|432808825|ref|ZP_20042735.1| ribosome-associated protein [Escherichia coli KTE91]
gi|432932452|ref|ZP_20132354.1| ribosome-associated protein [Escherichia coli KTE184]
gi|433191981|ref|ZP_20376014.1| ribosome-associated protein [Escherichia coli KTE90]
gi|431352048|gb|ELG38834.1| ribosome-associated protein [Escherichia coli KTE91]
gi|431457462|gb|ELH37801.1| ribosome-associated protein [Escherichia coli KTE184]
gi|431723803|gb|ELJ87748.1| ribosome-associated protein [Escherichia coli KTE90]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIWASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|110640411|ref|YP_668139.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
536]
gi|191172758|ref|ZP_03034295.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
gi|300990439|ref|ZP_07179207.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 200-1]
gi|422374550|ref|ZP_16454828.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 60-1]
gi|432469525|ref|ZP_19711581.1| ribosome-associated protein [Escherichia coli KTE206]
gi|432711880|ref|ZP_19946934.1| ribosome-associated protein [Escherichia coli KTE8]
gi|433076351|ref|ZP_20262931.1| ribosome-associated protein [Escherichia coli KTE131]
gi|110342003|gb|ABG68240.1| peptidyl-tRNA hydrolase [Escherichia coli 536]
gi|190906908|gb|EDV66510.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
gi|254966722|gb|ACT97354.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
AM_gF3SD01_02]
gi|254966729|gb|ACT97359.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
AM_gF3SD01_04]
gi|254966742|gb|ACT97368.1| hypothetical protein [mixed culture bacterium AM_gF3SD01_08]
gi|300305739|gb|EFJ60259.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 200-1]
gi|324014123|gb|EGB83342.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 60-1]
gi|431001503|gb|ELD17086.1| ribosome-associated protein [Escherichia coli KTE206]
gi|431260424|gb|ELF52522.1| ribosome-associated protein [Escherichia coli KTE8]
gi|431603345|gb|ELI72771.1| ribosome-associated protein [Escherichia coli KTE131]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|311280839|ref|YP_003943070.1| class I peptide chain release factor [Enterobacter cloacae SCF1]
gi|308750034|gb|ADO49786.1| Class I peptide chain release factor [Enterobacter cloacae SCF1]
Length = 140
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R + + E++IT R+ G GGQHVN ST + +RF + A++ L E+ K +L+ +
Sbjct: 2 IVISRGVVLADDEVEITAVRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEEYKTRLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
+ ++ +G +IIK+ RSQ++N A+ L ++I
Sbjct: 61 HHLISAEGVIIIKAQEYRSQEMNREAALARLVSVIQ 96
>gi|395496686|ref|ZP_10428265.1| hypothetical protein PPAM2_11465 [Pseudomonas sp. PAMC 25886]
Length = 137
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L + K++L+ L +R+ +G LI+
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPDFYKERLLALRDSRITSEGVLIL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELIQSATK 100
>gi|417826206|ref|ZP_12472788.1| putative-tRNA hydrolase domain protein [Shigella flexneri J1713]
gi|335578393|gb|EGM63611.1| putative-tRNA hydrolase domain protein [Shigella flexneri J1713]
Length = 138
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++I
Sbjct: 12 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVI 70
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A+ L
Sbjct: 71 KAQEYRSQELNREAALARL 89
>gi|238796634|ref|ZP_04640141.1| hypothetical protein ymoll0001_31010 [Yersinia mollaretii ATCC
43969]
gi|238719612|gb|EEQ11421.1| hypothetical protein ymoll0001_31010 [Yersinia mollaretii ATCC
43969]
Length = 138
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLMTAEGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 73 KAQEYRSQDMNREAALARLVALIRQA 98
>gi|383188862|ref|YP_005198990.1| protein chain release factor B [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371587120|gb|AEX50850.1| protein chain release factor B [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 136
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN ST + +RF + A++ L E K++L+ N + + DG++II
Sbjct: 14 EIELTAIRAQGNGGQNVNKTSTAIHLRFDIKASS-LPEYYKERLLAFNHHSVTADGWVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ++N A+ L ++I +A
Sbjct: 73 KAQEYRSQEMNREAALARLSSLISQA 98
>gi|26246139|ref|NP_752178.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli CFT073]
gi|218688067|ref|YP_002396279.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
ED1a]
gi|222155017|ref|YP_002555156.1| hypothetical protein LF82_2489 [Escherichia coli LF82]
gi|227884895|ref|ZP_04002700.1| Trna hydrolase domain protein [Escherichia coli 83972]
gi|300993587|ref|ZP_07180443.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 45-1]
gi|301049894|ref|ZP_07196820.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 185-1]
gi|306815209|ref|ZP_07449358.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NC101]
gi|331645335|ref|ZP_08346446.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
gi|331681577|ref|ZP_08382214.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
gi|386617698|ref|YP_006137278.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
NA114]
gi|386627714|ref|YP_006147434.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
str. 'clone D i2']
gi|386632634|ref|YP_006152353.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
str. 'clone D i14']
gi|386637550|ref|YP_006104348.1| peptidyl-tRNA hydrolase [Escherichia coli ABU 83972]
gi|387615539|ref|YP_006118561.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
O83:H1 str. NRG 857C]
gi|387828260|ref|YP_003348197.1| hypothetical protein ECSF_0207 [Escherichia coli SE15]
gi|417151361|ref|ZP_11990888.1| RF-1 domain protein [Escherichia coli 1.2264]
gi|417288087|ref|ZP_12075373.1| RF-1 domain protein [Escherichia coli TW07793]
gi|417660824|ref|ZP_12310405.1| YaeJ-like protein [Escherichia coli AA86]
gi|419912633|ref|ZP_14431081.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli KD1]
gi|422362670|ref|ZP_16443231.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 153-1]
gi|422367583|ref|ZP_16448018.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 16-3]
gi|432384749|ref|ZP_19627662.1| ribosome-associated protein [Escherichia coli KTE15]
gi|432385578|ref|ZP_19628480.1| ribosome-associated protein [Escherichia coli KTE16]
gi|432396047|ref|ZP_19638840.1| ribosome-associated protein [Escherichia coli KTE25]
gi|432405080|ref|ZP_19647804.1| ribosome-associated protein [Escherichia coli KTE28]
gi|432410194|ref|ZP_19652881.1| ribosome-associated protein [Escherichia coli KTE39]
gi|432420316|ref|ZP_19662875.1| ribosome-associated protein [Escherichia coli KTE178]
gi|432430353|ref|ZP_19672803.1| ribosome-associated protein [Escherichia coli KTE187]
gi|432434741|ref|ZP_19677152.1| ribosome-associated protein [Escherichia coli KTE188]
gi|432439528|ref|ZP_19681893.1| ribosome-associated protein [Escherichia coli KTE189]
gi|432444651|ref|ZP_19686962.1| ribosome-associated protein [Escherichia coli KTE191]
gi|432454970|ref|ZP_19697182.1| ribosome-associated protein [Escherichia coli KTE201]
gi|432494020|ref|ZP_19735842.1| ribosome-associated protein [Escherichia coli KTE214]
gi|432498492|ref|ZP_19740273.1| ribosome-associated protein [Escherichia coli KTE216]
gi|432510425|ref|ZP_19749285.1| ribosome-associated protein [Escherichia coli KTE220]
gi|432512390|ref|ZP_19749637.1| ribosome-associated protein [Escherichia coli KTE224]
gi|432522334|ref|ZP_19759479.1| ribosome-associated protein [Escherichia coli KTE230]
gi|432557223|ref|ZP_19793917.1| ribosome-associated protein [Escherichia coli KTE49]
gi|432567065|ref|ZP_19803597.1| ribosome-associated protein [Escherichia coli KTE53]
gi|432591195|ref|ZP_19827528.1| ribosome-associated protein [Escherichia coli KTE60]
gi|432606058|ref|ZP_19842258.1| ribosome-associated protein [Escherichia coli KTE67]
gi|432609898|ref|ZP_19846074.1| ribosome-associated protein [Escherichia coli KTE72]
gi|432644601|ref|ZP_19880408.1| ribosome-associated protein [Escherichia coli KTE86]
gi|432649562|ref|ZP_19885332.1| ribosome-associated protein [Escherichia coli KTE87]
gi|432654235|ref|ZP_19889957.1| ribosome-associated protein [Escherichia coli KTE93]
gi|432692880|ref|ZP_19928100.1| ribosome-associated protein [Escherichia coli KTE162]
gi|432697499|ref|ZP_19932675.1| ribosome-associated protein [Escherichia coli KTE169]
gi|432709038|ref|ZP_19944107.1| ribosome-associated protein [Escherichia coli KTE6]
gi|432721793|ref|ZP_19956722.1| ribosome-associated protein [Escherichia coli KTE17]
gi|432726203|ref|ZP_19961092.1| ribosome-associated protein [Escherichia coli KTE18]
gi|432739971|ref|ZP_19974694.1| ribosome-associated protein [Escherichia coli KTE23]
gi|432744118|ref|ZP_19978827.1| ribosome-associated protein [Escherichia coli KTE43]
gi|432782080|ref|ZP_20016267.1| ribosome-associated protein [Escherichia coli KTE63]
gi|432800520|ref|ZP_20034511.1| ribosome-associated protein [Escherichia coli KTE84]
gi|432842454|ref|ZP_20075882.1| ribosome-associated protein [Escherichia coli KTE141]
gi|432892768|ref|ZP_20104935.1| ribosome-associated protein [Escherichia coli KTE165]
gi|432896864|ref|ZP_20107958.1| ribosome-associated protein [Escherichia coli KTE192]
gi|432902493|ref|ZP_20112241.1| ribosome-associated protein [Escherichia coli KTE194]
gi|432917180|ref|ZP_20121851.1| ribosome-associated protein [Escherichia coli KTE173]
gi|432924475|ref|ZP_20126762.1| ribosome-associated protein [Escherichia coli KTE175]
gi|432941887|ref|ZP_20139385.1| ribosome-associated protein [Escherichia coli KTE183]
gi|432970329|ref|ZP_20159211.1| ribosome-associated protein [Escherichia coli KTE207]
gi|432976897|ref|ZP_20165724.1| ribosome-associated protein [Escherichia coli KTE209]
gi|432979580|ref|ZP_20168368.1| ribosome-associated protein [Escherichia coli KTE211]
gi|432983915|ref|ZP_20172657.1| ribosome-associated protein [Escherichia coli KTE215]
gi|432989137|ref|ZP_20177810.1| ribosome-associated protein [Escherichia coli KTE217]
gi|432993949|ref|ZP_20182570.1| ribosome-associated protein [Escherichia coli KTE218]
gi|432998367|ref|ZP_20186917.1| ribosome-associated protein [Escherichia coli KTE223]
gi|433012366|ref|ZP_20200755.1| ribosome-associated protein [Escherichia coli KTE104]
gi|433026561|ref|ZP_20214515.1| ribosome-associated protein [Escherichia coli KTE106]
gi|433027211|ref|ZP_20215091.1| ribosome-associated protein [Escherichia coli KTE109]
gi|433037118|ref|ZP_20224746.1| ribosome-associated protein [Escherichia coli KTE113]
gi|433056518|ref|ZP_20243619.1| ribosome-associated protein [Escherichia coli KTE124]
gi|433081097|ref|ZP_20267577.1| ribosome-associated protein [Escherichia coli KTE133]
gi|433085844|ref|ZP_20272254.1| ribosome-associated protein [Escherichia coli KTE137]
gi|433095073|ref|ZP_20281299.1| ribosome-associated protein [Escherichia coli KTE139]
gi|433099731|ref|ZP_20285852.1| ribosome-associated protein [Escherichia coli KTE145]
gi|433104376|ref|ZP_20290401.1| ribosome-associated protein [Escherichia coli KTE148]
gi|433109372|ref|ZP_20295256.1| ribosome-associated protein [Escherichia coli KTE150]
gi|433114129|ref|ZP_20299954.1| ribosome-associated protein [Escherichia coli KTE153]
gi|433123790|ref|ZP_20309389.1| ribosome-associated protein [Escherichia coli KTE160]
gi|433137859|ref|ZP_20323153.1| ribosome-associated protein [Escherichia coli KTE167]
gi|433142691|ref|ZP_20327877.1| ribosome-associated protein [Escherichia coli KTE168]
gi|433147611|ref|ZP_20332698.1| ribosome-associated protein [Escherichia coli KTE174]
gi|433191514|ref|ZP_20375581.1| ribosome-associated protein [Escherichia coli KTE88]
gi|433196763|ref|ZP_20380701.1| ribosome-associated protein [Escherichia coli KTE94]
gi|433206363|ref|ZP_20390072.1| ribosome-associated protein [Escherichia coli KTE97]
gi|433211111|ref|ZP_20394735.1| ribosome-associated protein [Escherichia coli KTE99]
gi|433325077|ref|ZP_20402294.1| hypothetical protein B185_015806 [Escherichia coli J96]
gi|442607276|ref|ZP_21022053.1| Hypothetical protein YaeJ with similarity to translation release
factor [Escherichia coli Nissle 1917]
gi|26106536|gb|AAN78722.1|AE016755_222 Hypothetical protein yaeJ [Escherichia coli CFT073]
gi|218425631|emb|CAR06417.1| conserved hypothetical protein [Escherichia coli ED1a]
gi|222032022|emb|CAP74761.1| Uncharacterized protein yaeJ [Escherichia coli LF82]
gi|227838033|gb|EEJ48499.1| Trna hydrolase domain protein [Escherichia coli 83972]
gi|254966714|gb|ACT97348.1| peptidyl-tRNA hydrolase domain protein [mixed culture bacterium
AM_gF1DD01_14]
gi|281177417|dbj|BAI53747.1| conserved hypothetical protein [Escherichia coli SE15]
gi|300298347|gb|EFJ54732.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 185-1]
gi|300406510|gb|EFJ90048.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 45-1]
gi|305850871|gb|EFM51326.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NC101]
gi|307552042|gb|ADN44817.1| peptidyl-tRNA hydrolase [Escherichia coli ABU 83972]
gi|312944800|gb|ADR25627.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli O83:H1
str. NRG 857C]
gi|315294596|gb|EFU53943.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 153-1]
gi|315300664|gb|EFU59891.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 16-3]
gi|330910042|gb|EGH38552.1| YaeJ-like protein [Escherichia coli AA86]
gi|331046092|gb|EGI18211.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
gi|331081798|gb|EGI52959.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
gi|333968199|gb|AEG35004.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli NA114]
gi|355418613|gb|AER82810.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli str.
'clone D i2']
gi|355423533|gb|AER87729.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli str.
'clone D i14']
gi|386159552|gb|EIH21366.1| RF-1 domain protein [Escherichia coli 1.2264]
gi|386248872|gb|EII95044.1| RF-1 domain protein [Escherichia coli TW07793]
gi|388391167|gb|EIL52640.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli KD1]
gi|430901972|gb|ELC23868.1| ribosome-associated protein [Escherichia coli KTE15]
gi|430911106|gb|ELC32404.1| ribosome-associated protein [Escherichia coli KTE16]
gi|430919069|gb|ELC40020.1| ribosome-associated protein [Escherichia coli KTE25]
gi|430933305|gb|ELC53716.1| ribosome-associated protein [Escherichia coli KTE28]
gi|430938913|gb|ELC59138.1| ribosome-associated protein [Escherichia coli KTE39]
gi|430947904|gb|ELC67592.1| ribosome-associated protein [Escherichia coli KTE178]
gi|430957659|gb|ELC76311.1| ribosome-associated protein [Escherichia coli KTE187]
gi|430968226|gb|ELC85459.1| ribosome-associated protein [Escherichia coli KTE188]
gi|430969936|gb|ELC87029.1| ribosome-associated protein [Escherichia coli KTE189]
gi|430976763|gb|ELC93621.1| ribosome-associated protein [Escherichia coli KTE191]
gi|430986903|gb|ELD03469.1| ribosome-associated protein [Escherichia coli KTE201]
gi|431029794|gb|ELD42825.1| ribosome-associated protein [Escherichia coli KTE214]
gi|431032568|gb|ELD45278.1| ribosome-associated protein [Escherichia coli KTE220]
gi|431032937|gb|ELD45643.1| ribosome-associated protein [Escherichia coli KTE216]
gi|431045520|gb|ELD55753.1| ribosome-associated protein [Escherichia coli KTE224]
gi|431055674|gb|ELD65213.1| ribosome-associated protein [Escherichia coli KTE230]
gi|431094841|gb|ELE00470.1| ribosome-associated protein [Escherichia coli KTE49]
gi|431103644|gb|ELE08287.1| ribosome-associated protein [Escherichia coli KTE53]
gi|431133756|gb|ELE35723.1| ribosome-associated protein [Escherichia coli KTE60]
gi|431142326|gb|ELE44076.1| ribosome-associated protein [Escherichia coli KTE67]
gi|431152529|gb|ELE53480.1| ribosome-associated protein [Escherichia coli KTE72]
gi|431185605|gb|ELE85334.1| ribosome-associated protein [Escherichia coli KTE86]
gi|431194848|gb|ELE94063.1| ribosome-associated protein [Escherichia coli KTE87]
gi|431196283|gb|ELE95228.1| ribosome-associated protein [Escherichia coli KTE93]
gi|431237900|gb|ELF32882.1| ribosome-associated protein [Escherichia coli KTE162]
gi|431247688|gb|ELF41909.1| ribosome-associated protein [Escherichia coli KTE169]
gi|431252759|gb|ELF46273.1| ribosome-associated protein [Escherichia coli KTE6]
gi|431269006|gb|ELF60367.1| ribosome-associated protein [Escherichia coli KTE17]
gi|431277451|gb|ELF68465.1| ribosome-associated protein [Escherichia coli KTE18]
gi|431287343|gb|ELF78161.1| ribosome-associated protein [Escherichia coli KTE23]
gi|431296491|gb|ELF86203.1| ribosome-associated protein [Escherichia coli KTE43]
gi|431332973|gb|ELG20194.1| ribosome-associated protein [Escherichia coli KTE63]
gi|431351416|gb|ELG38203.1| ribosome-associated protein [Escherichia coli KTE84]
gi|431398222|gb|ELG81645.1| ribosome-associated protein [Escherichia coli KTE141]
gi|431426189|gb|ELH08234.1| ribosome-associated protein [Escherichia coli KTE165]
gi|431431008|gb|ELH12787.1| ribosome-associated protein [Escherichia coli KTE192]
gi|431438622|gb|ELH19996.1| ribosome-associated protein [Escherichia coli KTE194]
gi|431448465|gb|ELH29182.1| ribosome-associated protein [Escherichia coli KTE173]
gi|431450116|gb|ELH30608.1| ribosome-associated protein [Escherichia coli KTE175]
gi|431456488|gb|ELH36832.1| ribosome-associated protein [Escherichia coli KTE183]
gi|431483855|gb|ELH63544.1| ribosome-associated protein [Escherichia coli KTE209]
gi|431487771|gb|ELH67415.1| ribosome-associated protein [Escherichia coli KTE207]
gi|431498530|gb|ELH77716.1| ribosome-associated protein [Escherichia coli KTE211]
gi|431500037|gb|ELH79054.1| ribosome-associated protein [Escherichia coli KTE217]
gi|431507981|gb|ELH86263.1| ribosome-associated protein [Escherichia coli KTE215]
gi|431511687|gb|ELH89818.1| ribosome-associated protein [Escherichia coli KTE218]
gi|431516178|gb|ELH93792.1| ribosome-associated protein [Escherichia coli KTE223]
gi|431527988|gb|ELI04702.1| ribosome-associated protein [Escherichia coli KTE106]
gi|431536935|gb|ELI13091.1| ribosome-associated protein [Escherichia coli KTE104]
gi|431546928|gb|ELI21315.1| ribosome-associated protein [Escherichia coli KTE109]
gi|431557226|gb|ELI31000.1| ribosome-associated protein [Escherichia coli KTE113]
gi|431575458|gb|ELI48193.1| ribosome-associated protein [Escherichia coli KTE124]
gi|431607349|gb|ELI76719.1| ribosome-associated protein [Escherichia coli KTE133]
gi|431610747|gb|ELI80032.1| ribosome-associated protein [Escherichia coli KTE137]
gi|431620811|gb|ELI89638.1| ribosome-associated protein [Escherichia coli KTE139]
gi|431624054|gb|ELI92678.1| ribosome-associated protein [Escherichia coli KTE145]
gi|431633534|gb|ELJ01814.1| ribosome-associated protein [Escherichia coli KTE150]
gi|431634820|gb|ELJ03041.1| ribosome-associated protein [Escherichia coli KTE148]
gi|431637656|gb|ELJ05711.1| ribosome-associated protein [Escherichia coli KTE153]
gi|431651002|gb|ELJ18309.1| ribosome-associated protein [Escherichia coli KTE160]
gi|431665892|gb|ELJ32601.1| ribosome-associated protein [Escherichia coli KTE167]
gi|431668071|gb|ELJ34647.1| ribosome-associated protein [Escherichia coli KTE168]
gi|431679274|gb|ELJ45187.1| ribosome-associated protein [Escherichia coli KTE174]
gi|431699583|gb|ELJ64588.1| ribosome-associated protein [Escherichia coli KTE88]
gi|431726661|gb|ELJ90469.1| ribosome-associated protein [Escherichia coli KTE94]
gi|431733962|gb|ELJ97365.1| ribosome-associated protein [Escherichia coli KTE97]
gi|431736534|gb|ELJ99859.1| ribosome-associated protein [Escherichia coli KTE99]
gi|432346626|gb|ELL41107.1| hypothetical protein B185_015806 [Escherichia coli J96]
gi|441711416|emb|CCQ08030.1| Hypothetical protein YaeJ with similarity to translation release
factor [Escherichia coli Nissle 1917]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|417948811|ref|ZP_12591953.1| putative chain release factor B protein [Vibrio splendidus ATCC
33789]
gi|342809174|gb|EGU44298.1| putative chain release factor B protein [Vibrio splendidus ATCC
33789]
Length = 136
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +T R+ G GGQ+VN VS+ + +RF + + L + K++L+ +R+ KDG +II
Sbjct: 14 ELQLTAIRAQGAGGQNVNKVSSAIHLRFDIKHST-LPDFYKEKLLAFKDSRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I +A K
Sbjct: 73 KAQQYRTQEQNREDALVRLKELILEATK 100
>gi|415837482|ref|ZP_11519556.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli RN587/1]
gi|417284418|ref|ZP_12071713.1| RF-1 domain protein [Escherichia coli 3003]
gi|422806586|ref|ZP_16855017.1| RF-1 domain-containing protein [Escherichia fergusonii B253]
gi|425276066|ref|ZP_18667421.1| hypothetical protein ECARS42123_0238 [Escherichia coli ARS4.2123]
gi|323190408|gb|EFZ75683.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli RN587/1]
gi|324112397|gb|EGC06374.1| RF-1 domain-containing protein [Escherichia fergusonii B253]
gi|386242627|gb|EII84362.1| RF-1 domain protein [Escherichia coli 3003]
gi|408207606|gb|EKI32327.1| hypothetical protein ECARS42123_0238 [Escherichia coli ARS4.2123]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|417244420|ref|ZP_12038430.1| RF-1 domain protein [Escherichia coli 9.0111]
gi|386211085|gb|EII21555.1| RF-1 domain protein [Escherichia coli 9.0111]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLADS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|344202578|ref|YP_004787721.1| class I peptide chain release factor [Muricauda ruestringensis DSM
13258]
gi|343954500|gb|AEM70299.1| Class I peptide chain release factor [Muricauda ruestringensis DSM
13258]
Length = 134
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN-KNRLNKDG 141
I EL RSSG GGQHVN VS+KV++ F + A+ L+ D +KQ I+L ++RL DG
Sbjct: 6 IHRELQFKAMRSSGAGGQHVNKVSSKVELTFNIPASEGLS-DREKQRIQLKLQSRLTNDG 64
Query: 142 YLIIKSDRTRSQQLN 156
L+++ D RSQ N
Sbjct: 65 ALVLQCDEARSQHRN 79
>gi|330502253|ref|YP_004379122.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
mendocina NK-01]
gi|328916539|gb|AEB57370.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas mendocina
NK-01]
Length = 137
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+++T R+ G GGQ+VN VS+ V +RF A++ L K++L+ +R+ DG ++
Sbjct: 13 EEIELTAIRAQGAGGQNVNKVSSAVHLRFDSQASS-LPPFYKERLLAFADSRITADGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N ADA+ L +I A K
Sbjct: 72 IKAQQYRTQEQNRADALERLAELIRTAGK 100
>gi|56551402|ref|YP_162241.1| peptidyl-tRNA hydrolase domain-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|397676640|ref|YP_006518178.1| class I peptide chain release factor [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|56542976|gb|AAV89130.1| Class I peptide chain release factor [Zymomonas mobilis subsp.
mobilis ZM4]
gi|395397329|gb|AFN56656.1| Class I peptide chain release factor [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 139
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++ ++ + R+SGPGGQ+VN VS+ V++RF + A + L E V +L E+ +
Sbjct: 6 ITQRISIDSDSIEEYFIRASGPGGQNVNKVSSAVELRFDM-AISGLPELVINRLQEIAAS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+N G L+I++ R R Q LN DA L +I A
Sbjct: 65 RINNKGILVIQAQRFRDQPLNRQDAFERLVELIRSA 100
>gi|38505650|ref|NP_942271.1| hypothetical protein slr5115 [Synechocystis sp. PCC 6803]
gi|451816658|ref|YP_007459861.1| hypothetical protein MYO_21160 [Synechocystis sp. PCC 6803]
gi|38423674|dbj|BAD01885.1| slr5115 [Synechocystis sp. PCC 6803]
gi|451782576|gb|AGF53542.1| hypothetical protein MYO_21160 [Synechocystis sp. PCC 6803]
Length = 137
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S E+++T RS G GGQ+VN V++ + +RF + A++ L + K++L+ LN R+ K
Sbjct: 8 LSIALTEIEMTALRSQGAGGQNVNKVASAIHLRFDIGASS-LPDVYKERLLNLNDQRITK 66
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
DG ++IK+ R+Q+ N +A+ L+ +I
Sbjct: 67 DGIVVIKAQSHRTQEQNREEALKRLQGLI 95
>gi|157147376|ref|YP_001454695.1| peptidyl-tRNA hydrolase domain protein [Citrobacter koseri ATCC
BAA-895]
gi|157084581|gb|ABV14259.1| hypothetical protein CKO_03174 [Citrobacter koseri ATCC BAA-895]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASG-LPEYYKERLLAASHHLISSDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A+ L
Sbjct: 73 KAQEYRSQELNREAAIARL 91
>gi|82775583|ref|YP_401930.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella
dysenteriae Sd197]
gi|309787129|ref|ZP_07681741.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1617]
gi|81239731|gb|ABB60441.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308924707|gb|EFP70202.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1617]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGVGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 YHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|345864778|ref|ZP_08816975.1| putative 15.2 kDa protein in pcaJ 3'region [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345878083|ref|ZP_08829810.1| peptide chain release factor 2 [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|344224885|gb|EGV51261.1| peptide chain release factor 2 [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|345124162|gb|EGW54045.1| putative 15.2 kDa protein in pcaJ 3'region [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 137
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE++++ R+ G GGQ+VN VS+ V +RF + A + L + K++L+ L R++ +G ++
Sbjct: 13 EEIELSAIRAQGAGGQNVNKVSSAVHLRFDI-AQSSLPDFYKQRLLTLRDRRISSEGIIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
IK+ R R+++ N DA+ LR +I A
Sbjct: 72 IKAQRFRTREKNRTDALERLRELICSVA 99
>gi|119503040|ref|ZP_01625125.1| Class I peptide chain release factor [marine gamma proteobacterium
HTCC2080]
gi|119461386|gb|EAW42476.1| Class I peptide chain release factor [marine gamma proteobacterium
HTCC2080]
Length = 135
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 79 RFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
R S I E +++ + R+SGPGGQ+VN VS+ + +RF V +++ L E VK +L+ + R+
Sbjct: 3 RVSDIPESQIEFSAIRASGPGGQNVNKVSSAIHLRFDVKSSS-LPEAVKLKLLRMRDARI 61
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+ +G +IIK+ + RSQ+ N +++ L +M+ K
Sbjct: 62 SSEGVIIIKAQKFRSQEKNRLESLERLNDMLKKC 95
>gi|2995387|emb|CAA63804.1| hypothetical protein YAEJ [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 147
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++ ++ + R+SGPGGQ+VN VS+ V++RF + A + L E V +L E+ +
Sbjct: 6 ITQRISIDSDSIEEYFIRASGPGGQNVNKVSSAVELRFDM-AISGLPELVINRLQEIAAS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+N G L+I++ R R Q LN DA L +I A
Sbjct: 65 RINNKGILVIQAQRFRDQPLNRQDAFERLVELIRSA 100
>gi|222147050|ref|YP_002548007.1| peptidyl-tRNA hydrolase domain protein [Agrobacterium vitis S4]
gi|221734040|gb|ACM35003.1| Peptidyl 1-tRNA Hydrolase [Agrobacterium vitis S4]
Length = 144
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + + GPGGQ+VN VST V + F + ++ L + +K I+L RL+K+G L+I
Sbjct: 18 ELTEQFVLAGGPGGQNVNKVSTAVQLFFPLTSSPSLPDRIKTNAIKLAGRRLSKEGVLLI 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
++ R RSQ+ N DA L+ ++ +AA
Sbjct: 78 EASRFRSQERNREDARERLKELLLEAA 104
>gi|238784903|ref|ZP_04628903.1| hypothetical protein yberc0001_31620 [Yersinia bercovieri ATCC
43970]
gi|238714220|gb|EEQ06232.1| hypothetical protein yberc0001_31620 [Yersinia bercovieri ATCC
43970]
Length = 138
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLMTAEGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 73 KAQEYRSQDMNREAALARLVALIRQA 98
>gi|374621480|ref|ZP_09694012.1| protein chain release factor B-like protein [Ectothiorhodospira sp.
PHS-1]
gi|373940613|gb|EHQ51158.1| protein chain release factor B-like protein [Ectothiorhodospira sp.
PHS-1]
Length = 137
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + ++ L K++L++ R++K+G +II
Sbjct: 14 EIELTQIRAQGAGGQNVNKVSSAVHLRFDIPRSS-LPRVYKERLLQRADQRISKEGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K+ R R+ + N DA+ L+++I +A KP
Sbjct: 73 KAQRFRTLEQNREDALARLKDLILEAMKP 101
>gi|218698859|ref|YP_002406488.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
IAI39]
gi|386622603|ref|YP_006142331.1| hypothetical protein CE10_0194 [Escherichia coli O7:K1 str. CE10]
gi|218368845|emb|CAR16594.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|349736341|gb|AEQ11047.1| conserved protein [Escherichia coli O7:K1 str. CE10]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|114797179|ref|YP_761379.1| peptidyl-tRNA hydrolase domain-containing protein [Hyphomonas
neptunium ATCC 15444]
gi|114737353|gb|ABI75478.1| peptidyl-tRNA hydrolase domain protein [Hyphomonas neptunium ATCC
15444]
Length = 144
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + R+SGPGGQ+VN VS+ V + + V A++ L VK++ +L +R+ DG L++
Sbjct: 19 ELSEAFVRASGPGGQNVNKVSSAVQLTWHVQASS-LPAPVKERFAKLFASRITADGRLML 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
++ RSQ LN A L MI KA+ P
Sbjct: 78 EASEHRSQVLNRTAARERLAEMILKASVP 106
>gi|392952757|ref|ZP_10318312.1| Class I peptide chain release factor [Hydrocarboniphaga effusa
AP103]
gi|391861719|gb|EIT72247.1| Class I peptide chain release factor [Hydrocarboniphaga effusa
AP103]
Length = 138
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+ P + ++++ R+ G GGQHVN S+ V +RF + A + L ED K++L+
Sbjct: 3 TLTPTVELPDDSIELSAMRAQGAGGQHVNKTSSAVQLRFDIRA-SVLPEDWKQRLLAKRD 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+R+ +DG ++IKS + RSQ++N A+ LR ++
Sbjct: 62 HRITEDGLVVIKSQQFRSQEMNREAAIERLRVLL 95
>gi|254511788|ref|ZP_05123855.1| peptidyl-tRNA hydrolase domain protein [Rhodobacteraceae bacterium
KLH11]
gi|221535499|gb|EEE38487.1| peptidyl-tRNA hydrolase domain protein [Rhodobacteraceae bacterium
KLH11]
Length = 139
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ ++ R+SGPGGQ+VN VST V++RF+ + L + VK +L L R K+G +II
Sbjct: 14 EMTESFVRASGPGGQNVNKVSTAVELRFEAARSPSLPDPVKNRLKRLAGRRWTKEGAIII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+ + TRSQ N A L +I +A KP +I+
Sbjct: 74 QCEETRSQARNRELARERLAELITRALIKPKRRIA 108
>gi|296114798|ref|ZP_06833448.1| peptidyl-tRNA hydrolase domain protein [Gluconacetobacter hansenii
ATCC 23769]
gi|295978722|gb|EFG85450.1| peptidyl-tRNA hydrolase domain protein [Gluconacetobacter hansenii
ATCC 23769]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 57/97 (58%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
++P +++ +TY +SGPGGQ+VN V+T +RF + L ++ +L L +
Sbjct: 5 ILPDLVISDDDIVVTYIHASGPGGQNVNKVATAAQLRFDMARCAALTSRIRARLHLLAGS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
R+ +DG +++ + + RSQ N DA+ L +++ +AA
Sbjct: 65 RMTRDGTIVLTAQKFRSQTRNREDAIERLCDLLRQAA 101
>gi|237808055|ref|YP_002892495.1| class I peptide chain release factor [Tolumonas auensis DSM 9187]
gi|237500316|gb|ACQ92909.1| Class I peptide chain release factor [Tolumonas auensis DSM 9187]
Length = 136
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A++ L + K++L+ L+ R+ +G +II
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAIHLRFDIKASS-LPDFYKERLLALSDQRITSEGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R Q+ N ADA+ L+ +I AK
Sbjct: 73 KAQQYRLQEQNRADALLRLQELIKSVAK 100
>gi|119383388|ref|YP_914444.1| peptidyl-tRNA hydrolase domain-containing protein [Paracoccus
denitrificans PD1222]
gi|119373155|gb|ABL68748.1| Class I peptide chain release factor [Paracoccus denitrificans
PD1222]
Length = 143
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++RS GPGGQ+VN V T V++RF+ + L VK +L L R +DG ++I
Sbjct: 14 ELSEQFTRSQGPGGQNVNKVETAVELRFEAERSPHLAPPVKARLKRLAGRRWTQDGAVLI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+++ TRSQ N A L +I +A
Sbjct: 74 RAEETRSQARNRELARERLAELIRQA 99
>gi|424815103|ref|ZP_18240254.1| peptidyl-tRNA hydrolase domain protein [Escherichia fergusonii
ECD227]
gi|325496123|gb|EGC93982.1| peptidyl-tRNA hydrolase domain protein [Escherichia fergusonii
ECD227]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|338707703|ref|YP_004661904.1| Class I peptide chain release factor [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294507|gb|AEI37614.1| Class I peptide chain release factor [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 139
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P S T++++ ++ R+SGPGGQ+VN VS+ V++RF + A + L + V ++L E+
Sbjct: 6 ISPSISIDTDDIEESFIRASGPGGQNVNKVSSAVELRFNM-ATSSLPQLVIERLREIAGY 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+N L+I++ R R Q LN ADA L +I A
Sbjct: 65 RINNKDVLVIQAQRFRDQPLNRADARERLIELIRSA 100
>gi|346642818|ref|YP_258732.2| hypothetical protein PFL_1606 [Pseudomonas protegens Pf-5]
gi|341579960|gb|AAY90903.2| peptidyl-tRNA hydrolase domain protein [Pseudomonas protegens Pf-5]
Length = 137
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L K++L+ L +R+ DG +I+
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPPFYKERLLALRDSRITSDGVIIL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLTELILSAIK 100
>gi|260752987|ref|YP_003225880.1| peptidyl-tRNA hydrolase domain-containing protein [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552350|gb|ACV75296.1| Class I peptide chain release factor [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 139
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++ ++ + R+SGPGGQ+VN VS+ V++RF + A + L E V +L E+ +
Sbjct: 6 ITQRVSIDSDSIEEYFIRASGPGGQNVNKVSSAVELRFDM-AISGLPELVINRLQEIAAS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+N G L+I++ R R Q LN DA L +I A
Sbjct: 65 RINNKGILVIQAQRFRDQPLNRQDAFERLVELIRSA 100
>gi|414163860|ref|ZP_11420107.1| hypothetical protein HMPREF9697_02008 [Afipia felis ATCC 53690]
gi|410881640|gb|EKS29480.1| hypothetical protein HMPREF9697_02008 [Afipia felis ATCC 53690]
Length = 138
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
++DI++ R+SGPGGQ+VN +ST +R V L D +L L R+ KDG L++
Sbjct: 14 DIDISFVRASGPGGQNVNKLSTAAQLRLDVGRLQ-LATDTLTRLQTLAGQRMTKDGVLVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ R R+Q+ N ADA+ L ++ +AA
Sbjct: 73 HAQRFRTQERNRADAIERLLVLLREAA 99
>gi|320170035|gb|EFW46934.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 114
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 23/105 (21%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
+T+ + +T++RSSGPGGQ+VN V+TKV++RF ++ A+W+ E VK +L+
Sbjct: 5 VTDRVSVTFARSSGPGGQNVNKVNTKVELRFNLSEASWIPERVKNRLV------------ 52
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIR 187
Q N+ DA L M+ KA++ + S + ++R
Sbjct: 53 -----------QFNIEDAFEKLEVMLAKASELPTETSPEQQAKVR 86
>gi|365103840|ref|ZP_09333501.1| hypothetical protein HMPREF9428_02582 [Citrobacter freundii
4_7_47CFAA]
gi|363644453|gb|EHL83734.1| hypothetical protein HMPREF9428_02582 [Citrobacter freundii
4_7_47CFAA]
Length = 140
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISGDGIIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A++ L
Sbjct: 73 KAQEYRSQELNREAAISRL 91
>gi|229592256|ref|YP_002874375.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas fluorescens
SBW25]
gi|229364122|emb|CAY51746.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 148
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L + K++L+ L +R+ +G L++
Sbjct: 25 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPDFYKERLLALRDSRITSEGVLVL 83
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 84 KAQQYRTQEQNRADALERLVELILSATK 111
>gi|113869548|ref|YP_728037.1| peptidyl-tRNA hydrolase [Ralstonia eutropha H16]
gi|113528324|emb|CAJ94669.1| Peptidyl-tRNA hydrolase [Ralstonia eutropha H16]
Length = 148
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 7/108 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+VIP Y+ IT R+ G GGQ++N VS V +R+ V+A++ L D K++L+ L+
Sbjct: 19 LVIPHHEYL-----ITAIRAQGAGGQNINKVSNAVHLRYDVHASS-LAPDHKERLLALHD 72
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
+R+ +DG ++IK+ + RS N +A+ L ++ A P P++ T
Sbjct: 73 HRITRDGVVVIKAQQFRSLDQNRDEAVRRLHELVRSVATP-PRVRRAT 119
>gi|359786846|ref|ZP_09289934.1| class I peptide chain release factor [Halomonas sp. GFAJ-1]
gi|359295953|gb|EHK60210.1| class I peptide chain release factor [Halomonas sp. GFAJ-1]
Length = 137
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+DI+ RS G GGQ+VN V++ V +RF + + L K++L+ L+ R++K+G +II
Sbjct: 14 EIDISQIRSQGAGGQNVNKVASAVHLRFDIQNST-LPPVYKERLMALSDQRISKEGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+ +LN DA+ L+ +I AAK
Sbjct: 73 KAQSYRTLELNKEDALARLKVLIQSAAK 100
>gi|237729498|ref|ZP_04559979.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226909227|gb|EEH95145.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 140
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISGDGIIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A++ L
Sbjct: 73 KAQEYRSQELNREAAISRL 91
>gi|444727851|gb|ELW68329.1| Peptidyl-tRNA hydrolase ICT1, mitochondrial [Tupaia chinensis]
Length = 203
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 12/115 (10%)
Query: 87 LDITYSRSSGP--------GGQHVNS----VSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
LD Y S GP G Q S V++K ++RF + A+W+ E V++++ +K
Sbjct: 45 LDKLYPESKGPDTAWRVPDGAQQAGSDIPLVNSKAEVRFHLATADWIAEPVRQKIAITHK 104
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
N++N+ G LI+ S+ +R Q NLAD + +R+MI +A++ + S++ R+R
Sbjct: 105 NKINRSGELILTSESSRYQFRNLADCLQKIRDMIAEASQVPKEPSKEDAQLKRLR 159
>gi|395229054|ref|ZP_10407370.1| putative peptidyl-tRNA hydrolase domain protein [Citrobacter sp.
A1]
gi|421844818|ref|ZP_16277975.1| hypothetical protein D186_07275 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424729153|ref|ZP_18157755.1| peptidyl-trna hydrolase domain protein [Citrobacter sp. L17]
gi|254966718|gb|ACT97351.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
bacterium AM_gF3SD01_01]
gi|254966740|gb|ACT97367.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
bacterium AM_gF3SD01_07]
gi|394717107|gb|EJF22805.1| putative peptidyl-tRNA hydrolase domain protein [Citrobacter sp.
A1]
gi|411774297|gb|EKS57807.1| hypothetical protein D186_07275 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422895877|gb|EKU35663.1| peptidyl-trna hydrolase domain protein [Citrobacter sp. L17]
gi|455643789|gb|EMF22913.1| hypothetical protein H262_13266 [Citrobacter freundii GTC 09479]
Length = 140
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASG-LPEYYKERLLAASHHLISGDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A++ L
Sbjct: 73 KAQEYRSQELNREAAISRL 91
>gi|384411951|ref|YP_005621316.1| class I peptide chain release factor [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335932325|gb|AEH62865.1| Class I peptide chain release factor [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 139
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++ ++ + R+SGPGGQ+VN VS+ V++RF + A + L E V +L E+ +
Sbjct: 6 ITQRVSIDSDSIEEYFIRASGPGGQNVNKVSSAVELRFDM-AISGLPELVINRLQEIAAS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
R+N G L+I++ R R Q LN DA L +I A
Sbjct: 65 RINNKGILVIQAQRFRDQPLNRQDAFERLVELIRSA 100
>gi|420375785|ref|ZP_14875611.1| putative-tRNA hydrolase domain protein [Shigella flexneri 1235-66]
gi|391309446|gb|EIQ67115.1| putative-tRNA hydrolase domain protein [Shigella flexneri 1235-66]
Length = 140
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASG-LPEYYKERLLAASHHLISGDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A++ L
Sbjct: 73 KAQEYRSQELNREAAISRL 91
>gi|386391384|ref|ZP_10076165.1| protein chain release factor B [Desulfovibrio sp. U5L]
gi|385732262|gb|EIG52460.1| protein chain release factor B [Desulfovibrio sp. U5L]
Length = 145
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 72 VIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
++P+ R + +EL + SRSSGPGGQ+VN VST++ + F ++A+ L + K ++ +
Sbjct: 5 LVPIT-SRVAIPADELTFSASRSSGPGGQNVNKVSTRITLWFDLDASPSLTDADKDRIRQ 63
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
+R+ KDG L I S TRSQ N A+ ++ A P P
Sbjct: 64 TLGSRIGKDGLLRIVSQTTRSQTANKELAVARFVELLRDALTPLP 108
>gi|398823891|ref|ZP_10582242.1| protein chain release factor B [Bradyrhizobium sp. YR681]
gi|398225416|gb|EJN11687.1| protein chain release factor B [Bradyrhizobium sp. YR681]
Length = 138
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I + R+SGPGGQ+VN V+T +RF L ED +L + R+ KDG ++
Sbjct: 13 DDIEIGFVRASGPGGQNVNKVATSAQLRFDTRKLT-LPEDAAIRLARIAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I++ R R+Q+ N DA+ L ++ +A +P P+
Sbjct: 72 IQAQRFRTQERNRQDAIDRLVEILTEAMIRPKPR 105
>gi|215485353|ref|YP_002327784.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
O127:H6 str. E2348/69]
gi|218703446|ref|YP_002410965.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli UMN026]
gi|293403261|ref|ZP_06647358.1| hypothetical protein ECGG_03557 [Escherichia coli FVEC1412]
gi|298378797|ref|ZP_06988681.1| yaeJ protein [Escherichia coli FVEC1302]
gi|300900766|ref|ZP_07118912.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 198-1]
gi|301025922|ref|ZP_07189408.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 69-1]
gi|312966329|ref|ZP_07780555.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 2362-75]
gi|331661566|ref|ZP_08362490.1| aminoacyl-tRNA hydrolase [Escherichia coli TA143]
gi|331671697|ref|ZP_08372495.1| aminoacyl-tRNA hydrolase [Escherichia coli TA280]
gi|387605667|ref|YP_006094523.1| putative peptidyl-tRNA hydrolase [Escherichia coli 042]
gi|417585011|ref|ZP_12235794.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_C165-02]
gi|417754018|ref|ZP_12402115.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2B]
gi|418995171|ref|ZP_13542791.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1A]
gi|419000361|ref|ZP_13547927.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1B]
gi|419005917|ref|ZP_13553375.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1C]
gi|419011751|ref|ZP_13559121.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1D]
gi|419016689|ref|ZP_13564017.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1E]
gi|419022279|ref|ZP_13569528.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2A]
gi|419027172|ref|ZP_13574376.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2C]
gi|419032953|ref|ZP_13580054.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2D]
gi|419037956|ref|ZP_13585019.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2E]
gi|419918919|ref|ZP_14437091.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli KD2]
gi|419935204|ref|ZP_14452289.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 576-1]
gi|422333353|ref|ZP_16414364.1| hypothetical protein HMPREF0986_02858 [Escherichia coli 4_1_47FAA]
gi|422971405|ref|ZP_16974680.1| hypothetical protein ESRG_01314 [Escherichia coli TA124]
gi|425298366|ref|ZP_18688424.1| aminoacyl-tRNA hydrolase [Escherichia coli 07798]
gi|432351825|ref|ZP_19595138.1| ribosome-associated protein [Escherichia coli KTE2]
gi|432390086|ref|ZP_19632952.1| ribosome-associated protein [Escherichia coli KTE21]
gi|432400271|ref|ZP_19643032.1| ribosome-associated protein [Escherichia coli KTE26]
gi|432429302|ref|ZP_19671768.1| ribosome-associated protein [Escherichia coli KTE181]
gi|432464044|ref|ZP_19706164.1| ribosome-associated protein [Escherichia coli KTE204]
gi|432469114|ref|ZP_19711177.1| ribosome-associated protein [Escherichia coli KTE205]
gi|432474188|ref|ZP_19716205.1| ribosome-associated protein [Escherichia coli KTE208]
gi|432492495|ref|ZP_19734340.1| ribosome-associated protein [Escherichia coli KTE213]
gi|432520840|ref|ZP_19758011.1| ribosome-associated protein [Escherichia coli KTE228]
gi|432541014|ref|ZP_19777894.1| ribosome-associated protein [Escherichia coli KTE235]
gi|432546509|ref|ZP_19783321.1| ribosome-associated protein [Escherichia coli KTE236]
gi|432546914|ref|ZP_19783714.1| ribosome-associated protein [Escherichia coli KTE237]
gi|432552230|ref|ZP_19788964.1| ribosome-associated protein [Escherichia coli KTE47]
gi|432581385|ref|ZP_19817803.1| ribosome-associated protein [Escherichia coli KTE57]
gi|432600702|ref|ZP_19836958.1| ribosome-associated protein [Escherichia coli KTE66]
gi|432625158|ref|ZP_19861157.1| ribosome-associated protein [Escherichia coli KTE76]
gi|432634637|ref|ZP_19870544.1| ribosome-associated protein [Escherichia coli KTE80]
gi|432644228|ref|ZP_19880042.1| ribosome-associated protein [Escherichia coli KTE83]
gi|432664348|ref|ZP_19899950.1| ribosome-associated protein [Escherichia coli KTE116]
gi|432717205|ref|ZP_19952209.1| ribosome-associated protein [Escherichia coli KTE9]
gi|432769000|ref|ZP_20003379.1| ribosome-associated protein [Escherichia coli KTE50]
gi|432773343|ref|ZP_20007645.1| ribosome-associated protein [Escherichia coli KTE54]
gi|432791418|ref|ZP_20025515.1| ribosome-associated protein [Escherichia coli KTE78]
gi|432797388|ref|ZP_20031417.1| ribosome-associated protein [Escherichia coli KTE79]
gi|432818412|ref|ZP_20052139.1| ribosome-associated protein [Escherichia coli KTE115]
gi|432837751|ref|ZP_20071247.1| ribosome-associated protein [Escherichia coli KTE140]
gi|432857001|ref|ZP_20084252.1| ribosome-associated protein [Escherichia coli KTE144]
gi|432858496|ref|ZP_20084992.1| ribosome-associated protein [Escherichia coli KTE146]
gi|432883882|ref|ZP_20099085.1| ribosome-associated protein [Escherichia coli KTE158]
gi|432909749|ref|ZP_20117022.1| ribosome-associated protein [Escherichia coli KTE190]
gi|432958920|ref|ZP_20149778.1| ribosome-associated protein [Escherichia coli KTE202]
gi|433017165|ref|ZP_20205441.1| ribosome-associated protein [Escherichia coli KTE105]
gi|433051406|ref|ZP_20238655.1| ribosome-associated protein [Escherichia coli KTE122]
gi|433061399|ref|ZP_20248373.1| ribosome-associated protein [Escherichia coli KTE125]
gi|433066312|ref|ZP_20253167.1| ribosome-associated protein [Escherichia coli KTE128]
gi|433071104|ref|ZP_20257821.1| ribosome-associated protein [Escherichia coli KTE129]
gi|433118670|ref|ZP_20304393.1| ribosome-associated protein [Escherichia coli KTE157]
gi|433157129|ref|ZP_20342012.1| ribosome-associated protein [Escherichia coli KTE177]
gi|433176552|ref|ZP_20361032.1| ribosome-associated protein [Escherichia coli KTE82]
gi|433181634|ref|ZP_20365946.1| ribosome-associated protein [Escherichia coli KTE85]
gi|433201632|ref|ZP_20385449.1| ribosome-associated protein [Escherichia coli KTE95]
gi|215263425|emb|CAS07745.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|218430543|emb|CAR11409.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|284919967|emb|CBG33022.1| putative peptidyl-tRNA hydrolase [Escherichia coli 042]
gi|291430176|gb|EFF03190.1| hypothetical protein ECGG_03557 [Escherichia coli FVEC1412]
gi|298281131|gb|EFI22632.1| yaeJ protein [Escherichia coli FVEC1302]
gi|300355751|gb|EFJ71621.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 198-1]
gi|300395777|gb|EFJ79315.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 69-1]
gi|312289572|gb|EFR17466.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 2362-75]
gi|331061481|gb|EGI33444.1| aminoacyl-tRNA hydrolase [Escherichia coli TA143]
gi|331071542|gb|EGI42899.1| aminoacyl-tRNA hydrolase [Escherichia coli TA280]
gi|345342374|gb|EGW74770.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli
STEC_C165-02]
gi|371598754|gb|EHN87549.1| hypothetical protein ESRG_01314 [Escherichia coli TA124]
gi|373245868|gb|EHP65333.1| hypothetical protein HMPREF0986_02858 [Escherichia coli 4_1_47FAA]
gi|377850538|gb|EHU15500.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1A]
gi|377851658|gb|EHU16603.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1C]
gi|377854422|gb|EHU19300.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1B]
gi|377865285|gb|EHU30077.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1D]
gi|377867896|gb|EHU32650.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC1E]
gi|377869362|gb|EHU34079.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2A]
gi|377880948|gb|EHU45514.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2B]
gi|377884884|gb|EHU49392.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2D]
gi|377886408|gb|EHU50890.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2C]
gi|377899464|gb|EHU63812.1| putative-tRNA hydrolase domain protein [Escherichia coli DEC2E]
gi|388388990|gb|EIL50533.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli KD2]
gi|388404942|gb|EIL65381.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli 576-1]
gi|408222113|gb|EKI46020.1| aminoacyl-tRNA hydrolase [Escherichia coli 07798]
gi|430881404|gb|ELC04658.1| ribosome-associated protein [Escherichia coli KTE2]
gi|430923699|gb|ELC44434.1| ribosome-associated protein [Escherichia coli KTE21]
gi|430930386|gb|ELC50887.1| ribosome-associated protein [Escherichia coli KTE26]
gi|430948484|gb|ELC68072.1| ribosome-associated protein [Escherichia coli KTE181]
gi|430983347|gb|ELD00011.1| ribosome-associated protein [Escherichia coli KTE204]
gi|430988248|gb|ELD04748.1| ribosome-associated protein [Escherichia coli KTE205]
gi|431011879|gb|ELD25953.1| ribosome-associated protein [Escherichia coli KTE208]
gi|431014247|gb|ELD27956.1| ribosome-associated protein [Escherichia coli KTE213]
gi|431046223|gb|ELD56342.1| ribosome-associated protein [Escherichia coli KTE228]
gi|431065169|gb|ELD73946.1| ribosome-associated protein [Escherichia coli KTE235]
gi|431068291|gb|ELD76796.1| ribosome-associated protein [Escherichia coli KTE236]
gi|431086726|gb|ELD92748.1| ribosome-associated protein [Escherichia coli KTE237]
gi|431087929|gb|ELD93850.1| ribosome-associated protein [Escherichia coli KTE47]
gi|431123145|gb|ELE25888.1| ribosome-associated protein [Escherichia coli KTE57]
gi|431144741|gb|ELE46435.1| ribosome-associated protein [Escherichia coli KTE66]
gi|431153224|gb|ELE54143.1| ribosome-associated protein [Escherichia coli KTE76]
gi|431165489|gb|ELE65842.1| ribosome-associated protein [Escherichia coli KTE80]
gi|431176109|gb|ELE76095.1| ribosome-associated protein [Escherichia coli KTE83]
gi|431205387|gb|ELF03880.1| ribosome-associated protein [Escherichia coli KTE116]
gi|431267326|gb|ELF58844.1| ribosome-associated protein [Escherichia coli KTE9]
gi|431320158|gb|ELG07806.1| ribosome-associated protein [Escherichia coli KTE50]
gi|431321853|gb|ELG09453.1| ribosome-associated protein [Escherichia coli KTE54]
gi|431343086|gb|ELG30056.1| ribosome-associated protein [Escherichia coli KTE78]
gi|431346602|gb|ELG33507.1| ribosome-associated protein [Escherichia coli KTE79]
gi|431359401|gb|ELG46046.1| ribosome-associated protein [Escherichia coli KTE115]
gi|431392582|gb|ELG76155.1| ribosome-associated protein [Escherichia coli KTE140]
gi|431395509|gb|ELG79021.1| ribosome-associated protein [Escherichia coli KTE144]
gi|431408739|gb|ELG91922.1| ribosome-associated protein [Escherichia coli KTE146]
gi|431420808|gb|ELH03084.1| ribosome-associated protein [Escherichia coli KTE158]
gi|431448799|gb|ELH29512.1| ribosome-associated protein [Escherichia coli KTE190]
gi|431483415|gb|ELH63107.1| ribosome-associated protein [Escherichia coli KTE202]
gi|431538097|gb|ELI14202.1| ribosome-associated protein [Escherichia coli KTE105]
gi|431576499|gb|ELI49186.1| ribosome-associated protein [Escherichia coli KTE122]
gi|431589678|gb|ELI60892.1| ribosome-associated protein [Escherichia coli KTE125]
gi|431593174|gb|ELI63738.1| ribosome-associated protein [Escherichia coli KTE128]
gi|431595653|gb|ELI65646.1| ribosome-associated protein [Escherichia coli KTE129]
gi|431650493|gb|ELJ17814.1| ribosome-associated protein [Escherichia coli KTE157]
gi|431683298|gb|ELJ48936.1| ribosome-associated protein [Escherichia coli KTE177]
gi|431711729|gb|ELJ76042.1| ribosome-associated protein [Escherichia coli KTE82]
gi|431712781|gb|ELJ77059.1| ribosome-associated protein [Escherichia coli KTE85]
gi|431727358|gb|ELJ91118.1| ribosome-associated protein [Escherichia coli KTE95]
Length = 140
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG ++IK+ R+Q+LN A+ L
Sbjct: 61 HHLISSDGVIVIKAQEYRNQELNREAALARL 91
>gi|254514271|ref|ZP_05126332.1| class I peptide chain release factor [gamma proteobacterium NOR5-3]
gi|219676514|gb|EED32879.1| class I peptide chain release factor [gamma proteobacterium NOR5-3]
Length = 135
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P F+ +++ + R+ G GGQ+VN VST V +RF ++ A L E VK++L+
Sbjct: 1 MTPEFALYLDDVQMDAVRAGGAGGQNVNKVSTAVHLRFDLHRAR-LPERVKERLLSGRDR 59
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
R+ DG L++K+ R R+Q N DA+ L ++ +A+
Sbjct: 60 RITDDGVLVLKAQRHRTQGKNREDAIERLVELLREAS 96
>gi|120437381|ref|YP_863067.1| peptidyl-tRNA hydrolase domain-containing protein [Gramella
forsetii KT0803]
gi|117579531|emb|CAL68000.1| protein containing peptidyl-tRNA hydrolase domain [Gramella
forsetii KT0803]
Length = 133
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
++ ELD RSSGPGGQH N +TKV++ F V + L++ KK++ R+NK+G
Sbjct: 5 FVLTELDYKAVRSSGPGGQHANKTATKVELSFDVENSQALSDQEKKRIFNKLSGRINKEG 64
Query: 142 YLIIKSDRTRSQQLN 156
L + S+ +RSQ N
Sbjct: 65 ILKMNSEDSRSQHTN 79
>gi|427404670|ref|ZP_18895410.1| hypothetical protein HMPREF9710_05006 [Massilia timonae CCUG 45783]
gi|425716841|gb|EKU79810.1| hypothetical protein HMPREF9710_05006 [Massilia timonae CCUG 45783]
Length = 131
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+ GPGGQ+VN VS V RF + A++ L + VK++L+ + R+ ++G L++
Sbjct: 8 EVEFSAIRAQGPGGQNVNKVSCAVHARFDIGASS-LPQHVKERLLASSDARITQEGVLVL 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ ++RS + N DA+ L+ ++ KA+
Sbjct: 67 KAQQSRSLEQNKEDALRRLQELVDKAS 93
>gi|410419868|ref|YP_006900317.1| hypothetical protein BN115_2079 [Bordetella bronchiseptica MO149]
gi|427821211|ref|ZP_18988274.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|408447163|emb|CCJ58835.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410572211|emb|CCN20478.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 138
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
Y+ E ELD R+ G GGQ+VN VS+ + +RF V A++ L E VK+ ++ L R++ D
Sbjct: 9 YLDERELDFDMIRAQGAGGQNVNKVSSAIHLRFDVRASS-LPESVKETVLALADRRISSD 67
Query: 141 GYLIIKSDRTRSQQLNLADAM 161
G ++IK+ RSQ+ N ADA+
Sbjct: 68 GVIVIKAQTHRSQEKNRADAV 88
>gi|407694435|ref|YP_006819223.1| class I peptide chain release factor [Alcanivorax dieselolei B5]
gi|407251773|gb|AFT68880.1| Class I peptide chain release factor [Alcanivorax dieselolei B5]
Length = 137
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 93 RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRS 152
R+ G GGQ+VN VS+ + +RF V ++ L E K++L+ L R+ DG ++IK+ R R+
Sbjct: 21 RAQGAGGQNVNKVSSAIHLRFDVRSST-LPEFYKERLLALGDQRITADGVIVIKAQRYRT 79
Query: 153 QQLNLADAMTTLRNMIWKA 171
Q+ NL DA+ LR +I A
Sbjct: 80 QEKNLDDALQRLRALILDA 98
>gi|345297966|ref|YP_004827324.1| class I peptide chain release factor [Enterobacter asburiae LF7a]
gi|345091903|gb|AEN63539.1| Class I peptide chain release factor [Enterobacter asburiae LF7a]
Length = 140
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ + + + DG ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKESLLAASHHLITSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A++ L +I
Sbjct: 73 KAQEYRSQELNREAAISRLVAVI 95
>gi|418291609|ref|ZP_12903584.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379063067|gb|EHY75810.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 137
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A++ L K++L+ L +R+ DG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSALHLRFDIQASS-LPAFYKERLLALRDSRITTDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R R+Q+ N DA+ L +I AK
Sbjct: 73 KAQRYRTQEQNRIDALERLAELIRSVAK 100
>gi|238787211|ref|ZP_04631010.1| hypothetical protein yfred0001_31960 [Yersinia frederiksenii ATCC
33641]
gi|238724473|gb|EEQ16114.1| hypothetical protein yfred0001_31960 [Yersinia frederiksenii ATCC
33641]
Length = 164
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLALNSHLMTAEGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A L +I +A
Sbjct: 73 KAQEYRSQDMNREAAQQRLVALIRQA 98
>gi|408376114|ref|ZP_11173719.1| hypothetical protein QWE_00945 [Agrobacterium albertimagni AOL15]
gi|407749581|gb|EKF61092.1| hypothetical protein QWE_00945 [Agrobacterium albertimagni AOL15]
Length = 144
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN VST V + F + + LN+ VK+ +L RL+
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFNLLGSPSLNDRVKQNAAKLAGKRLS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+G L+I++ R RSQ N DA L+ ++ +AA
Sbjct: 71 KEGVLMIEASRFRSQDRNREDARERLKELLLEAA 104
>gi|384215506|ref|YP_005606672.1| hypothetical protein BJ6T_18030 [Bradyrhizobium japonicum USDA 6]
gi|354954405|dbj|BAL07084.1| hypothetical protein BJ6T_18030 [Bradyrhizobium japonicum USDA 6]
Length = 139
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I + R+SGPGGQ+VN VST +RF L ED +L + R+ KDG ++
Sbjct: 13 DDIEIGFVRASGPGGQNVNKVSTSAQLRFDTRKLT-LPEDAVIRLARIAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I + R R+Q+ N DA+ L ++ +A +P P+
Sbjct: 72 IHAQRFRTQERNRQDAIDRLTEILTEAMIRPKPR 105
>gi|115523440|ref|YP_780351.1| peptidyl-tRNA hydrolase domain-containing protein [Rhodopseudomonas
palustris BisA53]
gi|115517387|gb|ABJ05371.1| Class I peptide chain release factor [Rhodopseudomonas palustris
BisA53]
Length = 141
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I + R+SGPGGQ+VN +ST +RF + +D+ +L L R+ KDG ++
Sbjct: 15 DDIEIGFVRASGPGGQNVNKLSTAAQLRFDTTRLT-MPDDMVVRLARLAGQRMTKDGVIV 73
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
I + R R+Q+ N ADA+ L ++ +AA
Sbjct: 74 IHAQRFRTQERNRADAIDRLVELLKEAA 101
>gi|419954867|ref|ZP_14471001.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri TS44]
gi|387968254|gb|EIK52545.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri TS44]
Length = 137
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ T R+ G GGQ+VN VS+ + +RF + A++ L +++L+ L +R+ DG ++I
Sbjct: 14 EIEFTAIRAQGAGGQNVNKVSSALHLRFDIKASS-LPAFYQERLLALRDSRITADGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R R+Q+ N ADA+ L +I A+
Sbjct: 73 KAQRYRTQEQNRADALERLAELIRSVAR 100
>gi|222084239|ref|YP_002542765.1| peptidyl-tRNA hydrolase domain-containing protein [Agrobacterium
radiobacter K84]
gi|398380807|ref|ZP_10538921.1| protein chain release factor B [Rhizobium sp. AP16]
gi|221721687|gb|ACM24843.1| peptide chain release factor protein (peptidyl-tRNA hydrolase
protein) [Agrobacterium radiobacter K84]
gi|397720238|gb|EJK80796.1| protein chain release factor B [Rhizobium sp. AP16]
Length = 144
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL + + GPGGQ+VN V+T V + F + + LN+ VK + L R++
Sbjct: 11 RITIAGWELTEQFVLAGGPGGQNVNKVATAVQLFFGIVNSPSLNDRVKANAVRLAGRRVS 70
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
KDG L+I++ R RSQ N DA L+ +I +AA
Sbjct: 71 KDGVLMIEASRFRSQDRNREDARERLKELILEAA 104
>gi|123443461|ref|YP_001007434.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420259695|ref|ZP_14762395.1| hypothetical protein YWA314_13068 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122090422|emb|CAL13290.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512842|gb|EKA26677.1| hypothetical protein YWA314_13068 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 138
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLSLNSHLMTAEGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I ++
Sbjct: 73 KAQEYRSQDMNREAALARLVALIRQS 98
>gi|401677347|ref|ZP_10809322.1| YaeJ Protein [Enterobacter sp. SST3]
gi|400215195|gb|EJO46106.1| YaeJ Protein [Enterobacter sp. SST3]
Length = 140
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ + + + DG ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKESLLAASHHLITSDGVMVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAAIARLVAVI 95
>gi|22126987|ref|NP_670410.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis KIM10+]
gi|45442551|ref|NP_994090.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia pestis
biovar Microtus str. 91001]
gi|51597295|ref|YP_071486.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia
pseudotuberculosis IP 32953]
gi|108806540|ref|YP_650456.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia pestis
Antiqua]
gi|108813093|ref|YP_648860.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia pestis
Nepal516]
gi|145598927|ref|YP_001163003.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia pestis
Pestoides F]
gi|153950494|ref|YP_001400020.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia
pseudotuberculosis IP 31758]
gi|162420286|ref|YP_001607749.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia pestis
Angola]
gi|165927135|ref|ZP_02222967.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|166211494|ref|ZP_02237529.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167400121|ref|ZP_02305639.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167425353|ref|ZP_02317106.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470131|ref|ZP_02334835.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis FV-1]
gi|170023338|ref|YP_001719843.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia
pseudotuberculosis YPIII]
gi|186896400|ref|YP_001873512.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia
pseudotuberculosis PB1/+]
gi|270487317|ref|ZP_06204391.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis KIM D27]
gi|294503082|ref|YP_003567144.1| hypothetical protein YPZ3_0972 [Yersinia pestis Z176003]
gi|384121524|ref|YP_005504144.1| hypothetical protein YPD4_0932 [Yersinia pestis D106004]
gi|384125697|ref|YP_005508311.1| hypothetical protein YPD8_1233 [Yersinia pestis D182038]
gi|21960032|gb|AAM86661.1|AE013912_5 hypothetical protein y3111 [Yersinia pestis KIM10+]
gi|45437416|gb|AAS62967.1| Protein chain release factor B [Yersinia pestis biovar Microtus
str. 91001]
gi|51590577|emb|CAH22218.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108776741|gb|ABG19260.1| hypothetical protein YPN_2933 [Yersinia pestis Nepal516]
gi|108778453|gb|ABG12511.1| hypothetical protein YPA_0543 [Yersinia pestis Antiqua]
gi|145210623|gb|ABP40030.1| hypothetical protein YPDSF_1645 [Yersinia pestis Pestoides F]
gi|152961989|gb|ABS49450.1| peptidyl-tRNA hydrolase domain protein [Yersinia pseudotuberculosis
IP 31758]
gi|162353101|gb|ABX87049.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis Angola]
gi|165921031|gb|EDR38255.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|166207265|gb|EDR51745.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167050829|gb|EDR62237.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167055753|gb|EDR65537.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169749872|gb|ACA67390.1| Class I peptide chain release factor [Yersinia pseudotuberculosis
YPIII]
gi|186699426|gb|ACC90055.1| Class I peptide chain release factor [Yersinia pseudotuberculosis
PB1/+]
gi|262361120|gb|ACY57841.1| hypothetical protein YPD4_0932 [Yersinia pestis D106004]
gi|262365361|gb|ACY61918.1| hypothetical protein YPD8_1233 [Yersinia pestis D182038]
gi|270335821|gb|EFA46598.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis KIM D27]
gi|294353541|gb|ADE63882.1| hypothetical protein YPZ3_0972 [Yersinia pestis Z176003]
Length = 146
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 22 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLVTAEGVVII 80
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 81 KAQEYRSQDMNREAALARLVALIRQA 106
>gi|407801599|ref|ZP_11148443.1| hypothetical protein S7S_00676 [Alcanivorax sp. W11-5]
gi|407025036|gb|EKE36779.1| hypothetical protein S7S_00676 [Alcanivorax sp. W11-5]
Length = 139
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S +E+ + R+ G GGQ+VN VS+ V +RF ++A++ L E + +L+ LN +R++
Sbjct: 8 LSLPEDEIQLEAIRAQGAGGQNVNKVSSAVHLRFDIHASS-LPEPYRSRLLALNDHRISA 66
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
+G ++IK+ + RSQ N DA+ LR +I
Sbjct: 67 EGVVVIKAQQFRSQLKNRYDALARLRELIL 96
>gi|407701770|ref|YP_006826557.1| hypothetical protein AMBLS11_17685 [Alteromonas macleodii str.
'Black Sea 11']
gi|407250917|gb|AFT80102.1| hypothetical protein AMBLS11_17685 [Alteromonas macleodii str.
'Black Sea 11']
Length = 162
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
++ P + E ++ R+ G GGQ+VN VS+ + +RF +N ++ L E +K++L++LN
Sbjct: 28 MITPSIAIDEGEAELQAIRAQGSGGQNVNKVSSAIHLRFDINGSS-LPEKLKQKLLQLND 86
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+R+ DG ++K+ R+Q+ N DA+ L I KAA
Sbjct: 87 SRVTNDGVFVLKAQNFRTQEQNREDALARLVEWI-KAA 123
>gi|308048193|ref|YP_003911759.1| class I peptide chain release factor [Ferrimonas balearica DSM
9799]
gi|307630383|gb|ADN74685.1| Class I peptide chain release factor [Ferrimonas balearica DSM
9799]
Length = 141
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R S EL+ R+SGPGGQHVN ST + + F V + L + K +++ L
Sbjct: 7 RVSIPANELEFQMIRASGPGGQHVNKTSTAIMLIFDVKHSTALPDHYKSRILARAHPNLT 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
G +IIK+ + RSQ++N DA+ L+ MI A
Sbjct: 67 PGGKIIIKAQQYRSQEMNRQDALERLKAMIDAA 99
>gi|332160616|ref|YP_004297193.1| peptidyl-tRNA hydrolase domain-containing protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325664846|gb|ADZ41490.1| peptidyl-tRNA hydrolase domain protein [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330860910|emb|CBX71190.1| uncharacterized protein yaeJ [Yersinia enterocolitica W22703]
Length = 138
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLSLNSHLMTAEGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I ++
Sbjct: 73 KAQEYRSQDMNREAALVRLVALIRQS 98
>gi|397686431|ref|YP_006523750.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri DSM 10701]
gi|395807987|gb|AFN77392.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri DSM 10701]
Length = 137
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ R+ G GGQ+VN VS+ V +RF + A++ L K++L+ L +R+ DG +I+
Sbjct: 14 EIELSAIRAQGAGGQNVNKVSSAVHLRFDIKASS-LPAFYKERLLALRDSRITGDGVIIL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N ADA+ L +I AA
Sbjct: 73 KAQQYRTQEQNRADALERLVELIRSAA 99
>gi|300790833|ref|YP_003771124.1| peptide chain release factor class I [Amycolatopsis mediterranei
U32]
gi|384154372|ref|YP_005537188.1| peptide chain release factor class I [Amycolatopsis mediterranei
S699]
gi|399542710|ref|YP_006555373.1| peptide chain release factor class I [Amycolatopsis mediterranei
S699]
gi|299800347|gb|ADJ50722.1| peptide chain release factor class I [Amycolatopsis mediterranei
U32]
gi|340532526|gb|AEK47731.1| peptide chain release factor class I [Amycolatopsis mediterranei
S699]
gi|398323480|gb|AFO82427.1| peptide chain release factor class I [Amycolatopsis mediterranei
S699]
Length = 138
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
VV RF+ EL +SRSSGPGGQ VN+ ++V++ F V A+ + E ++ +++
Sbjct: 2 VVGSRFTIPGAELSERFSRSSGPGGQGVNTTDSRVELSFDVAASPSIPEHLRDRVLTGLG 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
+RL DG L I + RSQ N A L N++ A+ P P
Sbjct: 62 SRL-VDGVLTIAASEHRSQLQNREAARGRLANLLLDASAPPP 102
>gi|416895540|ref|ZP_11925441.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_7v]
gi|417112243|ref|ZP_11964366.1| RF-1 domain protein [Escherichia coli 1.2741]
gi|422802492|ref|ZP_16850985.1| RF-1 domain-containing protein [Escherichia coli M863]
gi|323964915|gb|EGB60381.1| RF-1 domain-containing protein [Escherichia coli M863]
gi|327255171|gb|EGE66774.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli STEC_7v]
gi|386143027|gb|EIG84163.1| RF-1 domain protein [Escherichia coli 1.2741]
Length = 140
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYI-TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPNGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|440895178|gb|ELR47439.1| hypothetical protein M91_03308, partial [Bos grunniens mutus]
Length = 122
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 27/116 (23%)
Query: 14 QRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVI 73
R V ++S+ SLDKLYP S G +P A G N I
Sbjct: 31 HRQVEGTEFRSAYSLDKLYPESR---------------GADTAWRVPGDAKQG---NDDI 72
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQL 129
PV + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++
Sbjct: 73 PV---------DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKM 119
>gi|149366932|ref|ZP_01888965.1| hypothetical protein YPE_2195 [Yersinia pestis CA88-4125]
gi|165939855|ref|ZP_02228395.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011890|ref|ZP_02232788.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|167419677|ref|ZP_02311430.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|218928235|ref|YP_002346110.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis CO92]
gi|229837774|ref|ZP_04457934.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia pestis Pestoides A]
gi|229840996|ref|ZP_04461155.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229843097|ref|ZP_04463247.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia pestis biovar Orientalis str. India
195]
gi|229903536|ref|ZP_04518649.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia pestis Nepal516]
gi|384141066|ref|YP_005523768.1| hypothetical protein A1122_20685 [Yersinia pestis A1122]
gi|384413697|ref|YP_005623059.1| peptide chain release factor 1 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420545692|ref|ZP_15043770.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-01]
gi|420550994|ref|ZP_15048514.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-02]
gi|420556502|ref|ZP_15053391.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-03]
gi|420562091|ref|ZP_15058286.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-04]
gi|420567115|ref|ZP_15062825.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-05]
gi|420572770|ref|ZP_15067961.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-06]
gi|420578103|ref|ZP_15072788.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-07]
gi|420583448|ref|ZP_15077650.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-08]
gi|420588599|ref|ZP_15082291.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-09]
gi|420593916|ref|ZP_15087084.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-10]
gi|420599599|ref|ZP_15092165.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-11]
gi|420605077|ref|ZP_15097063.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-12]
gi|420610426|ref|ZP_15101898.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-13]
gi|420615738|ref|ZP_15106603.1| RF-1 domain protein [Yersinia pestis PY-14]
gi|420621133|ref|ZP_15111359.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-15]
gi|420626189|ref|ZP_15115940.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-16]
gi|420631379|ref|ZP_15120638.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-19]
gi|420642069|ref|ZP_15130248.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-29]
gi|420647209|ref|ZP_15134954.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-32]
gi|420652860|ref|ZP_15140026.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-34]
gi|420658371|ref|ZP_15144983.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-36]
gi|420663697|ref|ZP_15149744.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-42]
gi|420668675|ref|ZP_15154256.1| RF-1 domain protein [Yersinia pestis PY-45]
gi|420673970|ref|ZP_15159074.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-46]
gi|420679516|ref|ZP_15164105.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-47]
gi|420684762|ref|ZP_15168808.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-48]
gi|420689939|ref|ZP_15173395.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-52]
gi|420701123|ref|ZP_15183078.1| RF-1 domain protein [Yersinia pestis PY-54]
gi|420707128|ref|ZP_15187954.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-55]
gi|420717848|ref|ZP_15197485.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-58]
gi|420723451|ref|ZP_15202301.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-59]
gi|420729072|ref|ZP_15207318.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-60]
gi|420734128|ref|ZP_15211881.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-61]
gi|420739599|ref|ZP_15216812.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-63]
gi|420744936|ref|ZP_15221511.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-64]
gi|420750725|ref|ZP_15226461.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-65]
gi|420755990|ref|ZP_15231035.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-66]
gi|420761848|ref|ZP_15235810.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-71]
gi|420767087|ref|ZP_15240538.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-72]
gi|420772076|ref|ZP_15245019.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-76]
gi|420777500|ref|ZP_15249868.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-88]
gi|420783018|ref|ZP_15254698.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-89]
gi|420788367|ref|ZP_15259412.1| RF-1 domain protein [Yersinia pestis PY-90]
gi|420793842|ref|ZP_15264354.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-91]
gi|420798960|ref|ZP_15268958.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-92]
gi|420804309|ref|ZP_15273769.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-93]
gi|420809554|ref|ZP_15278522.1| RF-1 domain protein [Yersinia pestis PY-94]
gi|420815270|ref|ZP_15283644.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-95]
gi|420820437|ref|ZP_15288321.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-96]
gi|420825534|ref|ZP_15292876.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-98]
gi|420836156|ref|ZP_15302469.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-100]
gi|420841298|ref|ZP_15307127.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-101]
gi|420846916|ref|ZP_15312199.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-102]
gi|420852335|ref|ZP_15316972.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-103]
gi|420857849|ref|ZP_15321662.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-113]
gi|421762517|ref|ZP_16199314.1| hypothetical protein INS_05500 [Yersinia pestis INS]
gi|115346846|emb|CAL19732.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|149290546|gb|EDM40622.1| hypothetical protein YPE_2195 [Yersinia pestis CA88-4125]
gi|165912258|gb|EDR30895.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165989156|gb|EDR41457.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166962418|gb|EDR58439.1| peptidyl-tRNA hydrolase domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|229679306|gb|EEO75409.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia pestis Nepal516]
gi|229689973|gb|EEO82032.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia pestis biovar Orientalis str. India
195]
gi|229697362|gb|EEO87409.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229704151|gb|EEO91163.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia pestis Pestoides A]
gi|320014201|gb|ADV97772.1| peptide chain release factor 1 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342856195|gb|AEL74748.1| hypothetical protein A1122_20685 [Yersinia pestis A1122]
gi|391429951|gb|EIQ91735.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-01]
gi|391431110|gb|EIQ92721.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-02]
gi|391433391|gb|EIQ94729.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-03]
gi|391446148|gb|EIR06213.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-04]
gi|391446759|gb|EIR06757.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-05]
gi|391450682|gb|EIR10285.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-06]
gi|391462256|gb|EIR20786.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-07]
gi|391463484|gb|EIR21883.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-08]
gi|391465563|gb|EIR23745.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-09]
gi|391478981|gb|EIR35826.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-10]
gi|391480099|gb|EIR36807.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-11]
gi|391480360|gb|EIR37040.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-12]
gi|391494212|gb|EIR49468.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-13]
gi|391495352|gb|EIR50457.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-15]
gi|391498157|gb|EIR52950.1| RF-1 domain protein [Yersinia pestis PY-14]
gi|391510180|gb|EIR63740.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-16]
gi|391510928|gb|EIR64386.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-19]
gi|391525682|gb|EIR77800.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-29]
gi|391528529|gb|EIR80335.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-34]
gi|391529415|gb|EIR81103.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-32]
gi|391542213|gb|EIR92691.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-36]
gi|391543953|gb|EIR94222.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-42]
gi|391544943|gb|EIR95092.1| RF-1 domain protein [Yersinia pestis PY-45]
gi|391559044|gb|EIS07862.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-46]
gi|391559623|gb|EIS08361.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-47]
gi|391561110|gb|EIS09668.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-48]
gi|391574268|gb|EIS21196.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-52]
gi|391586621|gb|EIS31902.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-55]
gi|391587175|gb|EIS32377.1| RF-1 domain protein [Yersinia pestis PY-54]
gi|391603544|gb|EIS46716.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-60]
gi|391603912|gb|EIS47030.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-58]
gi|391605141|gb|EIS48062.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-59]
gi|391617954|gb|EIS59446.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-61]
gi|391618530|gb|EIS59935.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-63]
gi|391625526|gb|EIS66006.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-64]
gi|391629590|gb|EIS69496.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-65]
gi|391640989|gb|EIS79469.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-71]
gi|391643602|gb|EIS81757.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-72]
gi|391643698|gb|EIS81838.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-66]
gi|391653239|gb|EIS90224.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-76]
gi|391659053|gb|EIS95396.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-88]
gi|391663961|gb|EIS99744.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-89]
gi|391666038|gb|EIT01553.1| RF-1 domain protein [Yersinia pestis PY-90]
gi|391672000|gb|EIT06882.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-91]
gi|391684200|gb|EIT17904.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-93]
gi|391685563|gb|EIT19085.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-92]
gi|391686486|gb|EIT19899.1| RF-1 domain protein [Yersinia pestis PY-94]
gi|391698193|gb|EIT30519.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-95]
gi|391701856|gb|EIT33808.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-96]
gi|391702817|gb|EIT34656.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-98]
gi|391718682|gb|EIT48901.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-100]
gi|391719021|gb|EIT49201.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-101]
gi|391729872|gb|EIT58808.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-102]
gi|391732810|gb|EIT61329.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-103]
gi|391736457|gb|EIT64476.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-113]
gi|411176723|gb|EKS46738.1| hypothetical protein INS_05500 [Yersinia pestis INS]
Length = 138
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLVTAEGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 73 KAQEYRSQDMNREAALARLVALIRQA 98
>gi|425898197|ref|ZP_18874788.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397891118|gb|EJL07596.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 137
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L K++L+ L +R+ DG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPPFYKERLLALRDSRITSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELILGAIK 100
>gi|336248835|ref|YP_004592545.1| hypothetical protein EAE_11760 [Enterobacter aerogenes KCTC 2190]
gi|444353023|ref|YP_007389167.1| Hypothetical protein YaeJ with similarity to translation release
factor [Enterobacter aerogenes EA1509E]
gi|334734891|gb|AEG97266.1| hypothetical protein EAE_11760 [Enterobacter aerogenes KCTC 2190]
gi|443903853|emb|CCG31627.1| Hypothetical protein YaeJ with similarity to translation release
factor [Enterobacter aerogenes EA1509E]
Length = 137
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+ +T R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG +I
Sbjct: 13 EEISLTGVRAQGAGGQHVNKASTAIHLRFDIKASS-LPEFYKERLLAASHHLISADGVVI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
IK+ RSQ++N A++ L +I
Sbjct: 72 IKAQEYRSQEMNREAAISRLVALI 95
>gi|119944651|ref|YP_942331.1| peptidyl-tRNA hydrolase domain-containing protein [Psychromonas
ingrahamii 37]
gi|119863255|gb|ABM02732.1| Class I peptide chain release factor [Psychromonas ingrahamii 37]
Length = 138
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+D+T R+ G GGQ+VN VS+ + +RF + + L + K++L+ L+ +R+ DG +II
Sbjct: 14 EIDMTAIRAQGAGGQNVNKVSSAIHLRFDIKKST-LPDFYKERLLALSDSRITGDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ R+Q+ N DA+ L+N+I AA
Sbjct: 73 KAQSHRTQEKNRDDALQRLKNLIVSAA 99
>gi|407784614|ref|ZP_11131763.1| hypothetical protein B30_01185 [Celeribacter baekdonensis B30]
gi|407204316|gb|EKE74297.1| hypothetical protein B30_01185 [Celeribacter baekdonensis B30]
Length = 138
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 82 YITEELDIT-------YSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
++T++++I + R+SGPGGQ+VN VST V++RF+ + L E VK +L L
Sbjct: 4 FVTDKIEIADWEITEQFVRASGPGGQNVNKVSTAVELRFEAARSPSLPEPVKNRLRRLAG 63
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
R KDG L++ D TR Q N L +I +AA+
Sbjct: 64 RRWTKDGALVMFCDETRHQARNREIVRERLVELIKQAAE 102
>gi|421619528|ref|ZP_16060482.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri KOS6]
gi|409778559|gb|EKN58258.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri KOS6]
Length = 137
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF ++A++ L K++L+ L +R+ DG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSALHLRFDIDASS-LPPFYKERLLVLRDSRITSDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R R+Q+ N DA+ L +I AK
Sbjct: 73 KAQRYRTQEQNRVDALERLAELIRSVAK 100
>gi|420636483|ref|ZP_15125204.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-25]
gi|420695750|ref|ZP_15178479.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-53]
gi|420712444|ref|ZP_15192748.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-56]
gi|420831313|ref|ZP_15298101.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-99]
gi|391515074|gb|EIR68124.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-25]
gi|391574834|gb|EIS21664.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-53]
gi|391590163|gb|EIS34950.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-56]
gi|391712342|gb|EIT43232.1| putative-tRNA hydrolase domain protein [Yersinia pestis PY-99]
Length = 137
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 13 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLVTAEGVVII 71
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 72 KAQEYRSQDMNREAALARLVALIRQA 97
>gi|420334453|ref|ZP_14836076.1| putative-tRNA hydrolase domain protein [Shigella flexneri K-315]
gi|391268630|gb|EIQ27555.1| putative-tRNA hydrolase domain protein [Shigella flexneri K-315]
Length = 138
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++I
Sbjct: 12 ELEITAIRAQGVGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVI 70
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A+ L
Sbjct: 71 KAQEYRSQELNREAALARL 89
>gi|389685166|ref|ZP_10176490.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas chlororaphis
O6]
gi|399009515|ref|ZP_10711946.1| protein chain release factor B [Pseudomonas sp. GM17]
gi|388550819|gb|EIM14088.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas chlororaphis
O6]
gi|398111933|gb|EJM01806.1| protein chain release factor B [Pseudomonas sp. GM17]
Length = 137
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ V +RF + A++ L K++L+ L +R+ DG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAVHLRFDIPASS-LPPFYKERLLALRDSRITSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLVELILGAIK 100
>gi|28901043|ref|NP_800698.1| peptidyl-tRNA hydrolase domain protein [Vibrio parahaemolyticus
RIMD 2210633]
gi|153837151|ref|ZP_01989818.1| class I peptide chain release factor [Vibrio parahaemolyticus
AQ3810]
gi|260362472|ref|ZP_05775405.1| class I peptide chain release factor [Vibrio parahaemolyticus
K5030]
gi|260879892|ref|ZP_05892247.1| class I peptide chain release factor [Vibrio parahaemolyticus
AN-5034]
gi|260894567|ref|ZP_05903063.1| class I peptide chain release factor [Vibrio parahaemolyticus
Peru-466]
gi|417322787|ref|ZP_12109321.1| hypothetical protein VP10329_09102 [Vibrio parahaemolyticus 10329]
gi|28809556|dbj|BAC62531.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149749568|gb|EDM60314.1| class I peptide chain release factor [Vibrio parahaemolyticus
AQ3810]
gi|308086411|gb|EFO36106.1| class I peptide chain release factor [Vibrio parahaemolyticus
Peru-466]
gi|308092022|gb|EFO41717.1| class I peptide chain release factor [Vibrio parahaemolyticus
AN-5034]
gi|308113352|gb|EFO50892.1| class I peptide chain release factor [Vibrio parahaemolyticus
K5030]
gi|328470941|gb|EGF41852.1| hypothetical protein VP10329_09102 [Vibrio parahaemolyticus 10329]
Length = 137
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ +T R+ G GGQ+VN V+T + +RF ++ ++ L E K++L+ L+ +R+ KDG +II
Sbjct: 14 EIQLTPIRAQGNGGQNVNKVATAIHLRFDIHHSS-LPEFYKERLLALSDSRITKDGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N DA+ L+ +I AA
Sbjct: 73 KAQQFRTQEKNKEDALNRLQELIKAAA 99
>gi|283835254|ref|ZP_06354995.1| peptidyl-tRNA hydrolase domain protein [Citrobacter youngae ATCC
29220]
gi|291068965|gb|EFE07074.1| peptidyl-tRNA hydrolase domain protein [Citrobacter youngae ATCC
29220]
Length = 140
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A+ L E K++L+ + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASG-LPEYYKERLLAARHHLISGDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A++ L
Sbjct: 73 KAQEYRSQELNREAAISRL 91
>gi|227536085|ref|ZP_03966134.1| protein chain release factor [Sphingobacterium spiritivorum ATCC
33300]
gi|227243982|gb|EEI93997.1| protein chain release factor [Sphingobacterium spiritivorum ATCC
33300]
Length = 136
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +SRS G GGQHVN VS+KV +++ V + + ED K L NR+NKDG L +
Sbjct: 11 ELVFKFSRSGGAGGQHVNKVSSKVLLQWDVAGSTFFLEDQKAILFHALSNRINKDGVLQL 70
Query: 146 KSDRTRSQ 153
+SD RSQ
Sbjct: 71 ESDNDRSQ 78
>gi|295136282|ref|YP_003586958.1| class I peptide chain release factor [Zunongwangia profunda SM-A87]
gi|294984297|gb|ADF54762.1| Class I peptide chain release factor [Zunongwangia profunda SM-A87]
Length = 134
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
+ +ELD +SSGPGGQHVN ++KV++ F + +++ L E K++L R+ KD
Sbjct: 7 LIKELDFRAVKSSGPGGQHVNKTASKVELYFNIASSSVLTEIQKERLQNTFSTRITKDNI 66
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDT 182
LI+++ +RSQ N + + MI K AP++ + T
Sbjct: 67 LILQNGNSRSQHKNKSAVINQFLEMI-KTGTKAPKVRKKT 105
>gi|126730017|ref|ZP_01745829.1| hypothetical protein SSE37_16603 [Sagittula stellata E-37]
gi|126709397|gb|EBA08451.1| hypothetical protein SSE37_16603 [Sagittula stellata E-37]
Length = 144
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 76 VIPRFSYITEELDIT-------YSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ 128
++P ITE++ I + RSSGPGGQ+VN VST V++RF+ + + L VK +
Sbjct: 1 MLPAMLRITEQITIEDWELTEQFIRSSGPGGQNVNKVSTAVELRFEADRSPNLPGPVKAR 60
Query: 129 LIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
L + R K+G ++++ D TRSQ N A L +I +A +
Sbjct: 61 LRRIAGRRWTKEGAVVLQVDETRSQARNREIARDRLSELILEATR 105
>gi|389699386|ref|ZP_10184959.1| protein chain release factor B [Leptothrix ochracea L12]
gi|388591471|gb|EIM31720.1| protein chain release factor B [Leptothrix ochracea L12]
Length = 133
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+ IT R+ G GGQ+VN VS V +RF ++A++ L ++K +L+ + R+ ++G ++
Sbjct: 9 HEVHITAIRAQGAGGQNVNKVSNAVHLRFDIHASS-LPPELKARLLAWSDQRITQEGVIV 67
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
IK+ RS ++N ADA+ L+ ++ +AA
Sbjct: 68 IKAQEHRSLEMNRADALHRLQALVDQAA 95
>gi|333900946|ref|YP_004474819.1| class I peptide chain release factor [Pseudomonas fulva 12-X]
gi|333116211|gb|AEF22725.1| Class I peptide chain release factor [Pseudomonas fulva 12-X]
Length = 137
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++T R+ G GGQ+VN VS+ + +RF A++ L K++L+ L +R+ DG +I
Sbjct: 13 DEIELTAIRAQGAGGQNVNKVSSAMHLRFDSQASS-LPPFYKERLLALRDSRITADGVVI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N ADA+ L +I A K
Sbjct: 72 IKAQQYRTQEQNRADALERLAELIRSAGK 100
>gi|254966702|gb|ACT97339.1| putative peptidyl-tRNA hydrolase domain protein [mixed culture
bacterium AM_gF1DD01_09]
Length = 140
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDNEYEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAVI 95
>gi|238754782|ref|ZP_04616133.1| hypothetical protein yruck0001_5000 [Yersinia ruckeri ATCC 29473]
gi|238706942|gb|EEP99308.1| hypothetical protein yruck0001_5000 [Yersinia ruckeri ATCC 29473]
Length = 138
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K +L+ LN + + DG +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKSSTAIHLRFDIKASS-LPEYYKLRLLALNHHLVTADGIVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 73 KAQEYRSQDMNREAALARLVALIRQA 98
>gi|429215029|ref|ZP_19206191.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas sp.
M1]
gi|428154256|gb|EKX00807.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas sp.
M1]
Length = 137
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ R+ G GGQ+VN VS+ V +RF + A++ L + K++L+ L+ R++ DG ++I
Sbjct: 14 EIELSAIRAQGAGGQNVNKVSSAVHLRFDIRASS-LPDFYKERLLALSDQRISGDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N DA+ L +I AA
Sbjct: 73 KAQQYRTQEQNREDALERLAELIRSAA 99
>gi|420251927|ref|ZP_14755084.1| protein chain release factor B [Burkholderia sp. BT03]
gi|398056631|gb|EJL48617.1| protein chain release factor B [Burkholderia sp. BT03]
Length = 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF V A++ L E +K +L+ ++ R+ +DG +II
Sbjct: 47 EIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASS-LPEVLKMRLLAMSDYRITRDGIVII 105
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q++N A+ L +I
Sbjct: 106 KAQEYRTQEMNRVAALARLDALI 128
>gi|146310394|ref|YP_001175468.1| peptidyl-tRNA hydrolase domain-containing protein [Enterobacter sp.
638]
gi|145317270|gb|ABP59417.1| Class I peptide chain release factor [Enterobacter sp. 638]
Length = 140
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E +IT R+ G GGQHVN ST + +RF + A++ L E K L+ + + + DG +II
Sbjct: 14 EFEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPESYKDALLAASHHLITSDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAALARLVALI 95
>gi|354721543|ref|ZP_09035758.1| hypothetical protein EmorL2_01526 [Enterobacter mori LMG 25706]
Length = 140
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + ++ L E K+ L+ + + + DG ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRVSS-LPEYYKESLLAASHHLITSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L MI
Sbjct: 73 KAQEYRSQELNREAAIARLVAMI 95
>gi|374702096|ref|ZP_09708966.1| hypothetical protein PseS9_01610 [Pseudomonas sp. S9]
Length = 137
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++T R+ G GGQ+VN VS+ + +RF A++ L K++L+ + +R+ DG +I
Sbjct: 13 DEIELTAIRAQGAGGQNVNKVSSAMHLRFDSQASS-LPAFYKERLMAMRDSRITADGVVI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N ADA+ L +I A K
Sbjct: 72 IKAQQFRTQEKNRADALARLCELILSAGK 100
>gi|338995640|ref|ZP_08635353.1| class I peptide chain release factor [Halomonas sp. TD01]
gi|338766496|gb|EGP21415.1| class I peptide chain release factor [Halomonas sp. TD01]
Length = 138
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+DI+ R+ G GGQ+VN V++ V +RF + ++ L K++L+ L+ R++K+G +II
Sbjct: 14 EIDISQIRAQGSGGQNVNKVASAVHLRFDIQSST-LPPVYKERLMALSDQRISKEGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+ +LN DA+ L+ +I A K
Sbjct: 73 KAQSYRTLELNKEDALARLKTLIQSAGK 100
>gi|260900441|ref|ZP_05908836.1| class I peptide chain release factor [Vibrio parahaemolyticus
AQ4037]
gi|308106927|gb|EFO44467.1| class I peptide chain release factor [Vibrio parahaemolyticus
AQ4037]
Length = 137
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ +T R+ G GGQ+VN V+T + +RF ++ ++ L E K++L+ L+ R+ KDG +II
Sbjct: 14 EIQLTPIRAQGNGGQNVNKVATAIHLRFDIHHSS-LPEFYKERLLALSDGRITKDGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N DA+ L+ +I AA
Sbjct: 73 KAQQFRTQEKNKEDALNRLQELIKAAA 99
>gi|384920916|ref|ZP_10020913.1| peptidyl-tRNA hydrolase domain protein [Citreicella sp. 357]
gi|384465255|gb|EIE49803.1| peptidyl-tRNA hydrolase domain protein [Citreicella sp. 357]
Length = 140
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R S E+ + R+SGPGGQ+VN VS+ V++RF+ + L + VK +L +L R
Sbjct: 7 RISIEDWEITEQFIRASGPGGQNVNKVSSAVELRFEAERSPNLPQPVKTRLRKLAGRRWT 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQI 178
K+G L+++ D TRSQ N A L ++I +A KP +I
Sbjct: 67 KEGALVLQVDETRSQVRNREIARERLADLIQRACEKPKRRI 107
>gi|357634872|ref|ZP_09132750.1| Class I peptide chain release factor [Desulfovibrio sp. FW1012B]
gi|357583426|gb|EHJ48759.1| Class I peptide chain release factor [Desulfovibrio sp. FW1012B]
Length = 145
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R + +EL T SRSSGPGGQ+VN VST++ + F + A+ L + K ++ + +
Sbjct: 8 ITGRVAIPADELTFTASRSSGPGGQNVNKVSTRITLWFDLAASPSLTDADKDRIRQALGS 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
R+ KDG L I S TRSQ N A+ ++ A P P
Sbjct: 68 RIGKDGLLRIISQTTRSQTANKELAVARFVELLRDALTPLP 108
>gi|218547647|ref|YP_002381438.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia
fergusonii ATCC 35469]
gi|218355188|emb|CAQ87795.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 140
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++I
Sbjct: 14 EFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAALARLVAVI 95
>gi|86143807|ref|ZP_01062183.1| Class I peptide chain release factor [Leeuwenhoekiella blandensis
MED217]
gi|85829850|gb|EAQ48312.1| Class I peptide chain release factor [Leeuwenhoekiella blandensis
MED217]
Length = 133
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
+ +E D RSSGPGGQHVN STKV + + + +N +ED K++L + +N+L D
Sbjct: 6 LFQECDFKAVRSSGPGGQHVNKTSTKVMLHWSLKDSNVFSEDQKQRLYKRLQNKLTTDDQ 65
Query: 143 LIIKSDRTRSQQLNLADAMTTL 164
L++ D++RSQ N + L
Sbjct: 66 LVLSYDQSRSQHKNKDEVFKNL 87
>gi|299134225|ref|ZP_07027418.1| Class I peptide chain release factor [Afipia sp. 1NLS2]
gi|298590972|gb|EFI51174.1| Class I peptide chain release factor [Afipia sp. 1NLS2]
Length = 138
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 91 YSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRT 150
+ R+SGPGGQ+VN +ST +RF V N L D ++L L R+ KDG L++ + R
Sbjct: 19 FVRASGPGGQNVNKLSTAAQLRFDVGRLN-LAADTLERLQTLAGQRMTKDGVLVLHAQRF 77
Query: 151 RSQQLNLADAMTTLRNMIWKAA 172
R+Q+ N ADA+ L ++ +AA
Sbjct: 78 RTQERNRADAIDRLLVLLREAA 99
>gi|189501132|ref|YP_001960602.1| class I peptide chain release factor [Chlorobium phaeobacteroides
BS1]
gi|189496573|gb|ACE05121.1| Class I peptide chain release factor [Chlorobium phaeobacteroides
BS1]
Length = 136
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++ RS G GGQ+VN V+T + +RF ++A++ L K++L+ L+ R+ KDG +II
Sbjct: 13 EIELLAIRSQGAGGQNVNKVATAIHLRFDIHASS-LPGFCKQKLLTLHDRRITKDGVIII 71
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L+ +I A
Sbjct: 72 KAQEHRSQEKNRQEALDRLKAIIQNA 97
>gi|322831612|ref|YP_004211639.1| class I peptide chain release factor [Rahnella sp. Y9602]
gi|384256726|ref|YP_005400660.1| hypothetical protein Q7S_04185 [Rahnella aquatilis HX2]
gi|321166813|gb|ADW72512.1| Class I peptide chain release factor [Rahnella sp. Y9602]
gi|380752702|gb|AFE57093.1| hypothetical protein Q7S_04185 [Rahnella aquatilis HX2]
Length = 136
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN ST + +RF + A++ L E K++L+ N + + DG++II
Sbjct: 14 EIELTAIRAQGNGGQNVNKTSTAIHLRFDIKASS-LPEYYKERLLAFNHHSVTADGWVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ++N A+ L +I +A
Sbjct: 73 KAQEYRSQEMNREAALARLGALISQA 98
>gi|269124845|ref|YP_003298215.1| Class I peptide chain release factor [Thermomonospora curvata DSM
43183]
gi|268309803|gb|ACY96177.1| Class I peptide chain release factor [Thermomonospora curvata DSM
43183]
Length = 143
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +SRSSGPGGQHVN+ +T ++ F V + L E K++ +E RLN G L I
Sbjct: 17 ELRWRFSRSSGPGGQHVNTSATAAELSFDVAGSPSLPEPYKRRALERLAGRLN-GGVLTI 75
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRI 188
+++ RSQ+LN A L ++ +A P P+ T R+
Sbjct: 76 RAEEHRSQKLNRDAARARLAALLTEATAPPPKKRRPTKPSRRV 118
>gi|294678990|ref|YP_003579605.1| class I peptide chain release factor [Rhodobacter capsulatus SB
1003]
gi|294477810|gb|ADE87198.1| class I peptide chain release factor [Rhodobacter capsulatus SB
1003]
Length = 140
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +++RS GPGGQ+VN VST V++RF+ + L VK +L L + DG ++I
Sbjct: 14 ELSESFTRSQGPGGQNVNKVSTAVELRFEAERSPHLTPPVKARLKRLAGRKWTLDGAIVI 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+++ TRSQ N A L +I +AA AP+
Sbjct: 74 RAEETRSQLRNRELARERLVELI-RAALVAPK 104
>gi|325914342|ref|ZP_08176689.1| protein chain release factor B [Xanthomonas vesicatoria ATCC 35937]
gi|325539350|gb|EGD10999.1| protein chain release factor B [Xanthomonas vesicatoria ATCC 35937]
Length = 143
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ DG L+I + R R+Q N DA L +I
Sbjct: 68 RMTADGVLVIDAQRFRTQDRNRDDARERLAEII 100
>gi|434387129|ref|YP_007097740.1| protein chain release factor B [Chamaesiphon minutus PCC 6605]
gi|428018119|gb|AFY94213.1| protein chain release factor B [Chamaesiphon minutus PCC 6605]
Length = 136
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ RS G GGQ+VN V+T + +RF + A++ L + K +L+EL R+ +G ++I
Sbjct: 14 EIELSAIRSQGAGGQNVNKVATAIHLRFDIMASS-LPDRYKNRLMELRDRRITTEGIIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
KS RSQ+ N +A+ L+ +I A
Sbjct: 73 KSQEHRSQERNREEALDRLKALILSVA 99
>gi|296446820|ref|ZP_06888758.1| Class I peptide chain release factor [Methylosinus trichosporium
OB3b]
gi|296255695|gb|EFH02784.1| Class I peptide chain release factor [Methylosinus trichosporium
OB3b]
Length = 139
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 80 FSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
F ++ E EL ++ RSSG GGQ+V V T V +RF + L V+ +L +L RL
Sbjct: 7 FIFLDESELQESFMRSSGAGGQNVQKVETAVQLRFDARHSPSLPAPVRARLEKLAGRRLT 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
KDG ++I + R R+Q N ADA L +I
Sbjct: 67 KDGVIVITAQRHRTQDRNRADARERLLELIH 97
>gi|300772055|ref|ZP_07081925.1| peptidyl-tRNA hydrolase domain protein [Sphingobacterium
spiritivorum ATCC 33861]
gi|300760358|gb|EFK57184.1| peptidyl-tRNA hydrolase domain protein [Sphingobacterium
spiritivorum ATCC 33861]
Length = 136
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +SRS G GGQHVN VS+KV +++ V + +ED K L NR+NKDG L +
Sbjct: 11 ELVFKFSRSGGAGGQHVNKVSSKVLLQWDVAGSTVFSEDQKAILFHALSNRINKDGVLQL 70
Query: 146 KSDRTRSQ 153
+SD RSQ
Sbjct: 71 ESDNDRSQ 78
>gi|15596065|ref|NP_249559.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PAO1]
gi|107100326|ref|ZP_01364244.1| hypothetical protein PaerPA_01001351 [Pseudomonas aeruginosa PACS2]
gi|116048792|ref|YP_792408.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218893163|ref|YP_002442032.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
aeruginosa LESB58]
gi|254239221|ref|ZP_04932544.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254245155|ref|ZP_04938477.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296390778|ref|ZP_06880253.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa
PAb1]
gi|355647478|ref|ZP_09055042.1| hypothetical protein HMPREF1030_04128 [Pseudomonas sp. 2_1_26]
gi|386060232|ref|YP_005976754.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
aeruginosa M18]
gi|416863961|ref|ZP_11915405.1| hypothetical protein PA13_26206 [Pseudomonas aeruginosa 138244]
gi|416868652|ref|ZP_11916213.1| hypothetical protein PA13_30286 [Pseudomonas aeruginosa 138244]
gi|416876904|ref|ZP_11919521.1| hypothetical protein PA15_15606 [Pseudomonas aeruginosa 152504]
gi|418586985|ref|ZP_13151022.1| hypothetical protein O1O_19911 [Pseudomonas aeruginosa MPAO1/P1]
gi|418589033|ref|ZP_13152963.1| hypothetical protein O1Q_00565 [Pseudomonas aeruginosa MPAO1/P2]
gi|420141230|ref|ZP_14648926.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa
CIG1]
gi|421154944|ref|ZP_15614434.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa ATCC
14886]
gi|421162532|ref|ZP_15621367.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa ATCC
25324]
gi|421176135|ref|ZP_15633803.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa
CI27]
gi|421182136|ref|ZP_15639619.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa E2]
gi|421515491|ref|ZP_15962177.1| hypothetical protein A161_04445 [Pseudomonas aeruginosa PAO579]
gi|424939948|ref|ZP_18355711.1| conserved hypothetical protein [Pseudomonas aeruginosa NCMG1179]
gi|9946766|gb|AAG04257.1|AE004521_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115584013|gb|ABJ10028.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126171152|gb|EAZ56663.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126198533|gb|EAZ62596.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218773391|emb|CAW29203.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|334833314|gb|EGM12438.1| hypothetical protein PA13_30286 [Pseudomonas aeruginosa 138244]
gi|334835145|gb|EGM14042.1| hypothetical protein PA13_26206 [Pseudomonas aeruginosa 138244]
gi|334840237|gb|EGM18897.1| hypothetical protein PA15_15606 [Pseudomonas aeruginosa 152504]
gi|346056394|dbj|GAA16277.1| conserved hypothetical protein [Pseudomonas aeruginosa NCMG1179]
gi|347306538|gb|AEO76652.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa M18]
gi|354827885|gb|EHF12022.1| hypothetical protein HMPREF1030_04128 [Pseudomonas sp. 2_1_26]
gi|375042604|gb|EHS35253.1| hypothetical protein O1O_19911 [Pseudomonas aeruginosa MPAO1/P1]
gi|375052192|gb|EHS44651.1| hypothetical protein O1Q_00565 [Pseudomonas aeruginosa MPAO1/P2]
gi|403246022|gb|EJY59782.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa
CIG1]
gi|404349219|gb|EJZ75556.1| hypothetical protein A161_04445 [Pseudomonas aeruginosa PAO579]
gi|404521249|gb|EKA31861.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa ATCC
14886]
gi|404531288|gb|EKA41248.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa
CI27]
gi|404534247|gb|EKA43999.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa ATCC
25324]
gi|404542521|gb|EKA51837.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa E2]
gi|453047894|gb|EME95607.1| hypothetical protein H123_00470 [Pseudomonas aeruginosa PA21_ST175]
Length = 137
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+++ R+ G GGQ+VN VS+ V +RF + A++ L K++L+ LN R++ DG ++
Sbjct: 13 HEIELNAIRAQGAGGQNVNKVSSAVHLRFDIQASS-LPPFYKERLLALNDQRISGDGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N DA+ L +I AK
Sbjct: 72 IKAQQYRTQEQNREDALERLAELIRSVAK 100
>gi|313105749|ref|ZP_07792012.1| hypothetical protein PA39016_000110046 [Pseudomonas aeruginosa
39016]
gi|386064590|ref|YP_005979894.1| hypothetical protein NCGM2_1644 [Pseudomonas aeruginosa NCGM2.S1]
gi|392985654|ref|YP_006484241.1| hypothetical protein PADK2_21360 [Pseudomonas aeruginosa DK2]
gi|419753952|ref|ZP_14280350.1| hypothetical protein CF510_13267 [Pseudomonas aeruginosa
PADK2_CF510]
gi|421169766|ref|ZP_15627771.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa ATCC
700888]
gi|451987487|ref|ZP_21935645.1| Hypothetical protein YaeJ with similarity to translation release
factor [Pseudomonas aeruginosa 18A]
gi|310878514|gb|EFQ37108.1| hypothetical protein PA39016_000110046 [Pseudomonas aeruginosa
39016]
gi|348033149|dbj|BAK88509.1| hypothetical protein NCGM2_1644 [Pseudomonas aeruginosa NCGM2.S1]
gi|384399891|gb|EIE46256.1| hypothetical protein CF510_13267 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392321159|gb|AFM66539.1| hypothetical protein PADK2_21360 [Pseudomonas aeruginosa DK2]
gi|404525670|gb|EKA35926.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas aeruginosa ATCC
700888]
gi|451755105|emb|CCQ88168.1| Hypothetical protein YaeJ with similarity to translation release
factor [Pseudomonas aeruginosa 18A]
Length = 137
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+++ R+ G GGQ+VN VS+ V +RF + A++ L K++L+ LN R++ DG ++
Sbjct: 13 HEIELNAIRAQGAGGQNVNKVSSAVHLRFDIQASS-LPPFYKERLLALNDQRISGDGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N DA+ L +I AK
Sbjct: 72 IKAQQYRTQEQNREDALERLAELIRSVAK 100
>gi|49077264|gb|AAT49658.1| PA0868, partial [synthetic construct]
Length = 138
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+++ R+ G GGQ+VN VS+ V +RF + A++ L K++L+ LN R++ DG ++
Sbjct: 13 HEIELNAIRAQGAGGQNVNKVSSAVHLRFDIQASS-LPPFYKERLLALNDQRISGDGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N DA+ L +I AK
Sbjct: 72 IKAQQYRTQEQNREDALERLAELIRSVAK 100
>gi|86137019|ref|ZP_01055597.1| hypothetical protein MED193_15132 [Roseobacter sp. MED193]
gi|85826343|gb|EAQ46540.1| hypothetical protein MED193_15132 [Roseobacter sp. MED193]
Length = 150
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN V+T V++RF+ + L VK +L L R K+G +++
Sbjct: 23 ELSESFMRASGPGGQNVNKVATAVELRFEAARSPALTPAVKARLKRLAGRRWTKEGAILM 82
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+ D TRSQ N L +I KA
Sbjct: 83 QCDETRSQLRNRELVRERLAELIRKA 108
>gi|27382597|ref|NP_774126.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium
japonicum USDA 110]
gi|27355769|dbj|BAC52751.1| blr7486 [Bradyrhizobium japonicum USDA 110]
Length = 138
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++++I + R+SGPGGQ+VN V+T +RF L ED +L + R+ KDG ++
Sbjct: 13 DDIEIGFVRASGPGGQNVNKVATSAQLRFDTRKLT-LPEDATIRLARIAGQRMTKDGVIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
I + R R+Q+ N DA+ L ++ +A +P P+
Sbjct: 72 IHAQRFRTQERNRQDAIDRLVEILSEAMIRPKPR 105
>gi|402700567|ref|ZP_10848546.1| hypothetical protein PfraA_12083 [Pseudomonas fragi A22]
Length = 137
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A + L K++L+ L +R+ DG LI+
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAMHLRFDI-ANSSLPPFYKERLLALRDSRITSDGVLIL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A K
Sbjct: 73 KAQQYRTQEQNRADALERLAELIISATK 100
>gi|358253123|dbj|GAA52160.1| peptidyl-tRNA hydrolase ICT1 [Clonorchis sinensis]
Length = 130
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 101 HVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADA 160
H +KV++RF V +A+W+ E + +L+E +R+ KD + II SDRTR Q LN AD
Sbjct: 10 HYPLARSKVEVRFHVPSASWIPEPARARLLEKEAHRITKDLFFIIASDRTRKQVLNQADC 69
Query: 161 MTTLRNMIWKAA----KPAP 176
+ +R +I + KP P
Sbjct: 70 LERIRRLIRECVAEINKPPP 89
>gi|83941869|ref|ZP_00954331.1| peptidyl-tRNA hydrolase domain protein [Sulfitobacter sp. EE-36]
gi|83847689|gb|EAP85564.1| peptidyl-tRNA hydrolase domain protein [Sulfitobacter sp. EE-36]
Length = 140
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + + VK +L L R +G L++
Sbjct: 14 ELTESFMRASGPGGQNVNKVSSAVELRFEAATSPSIPTPVKNRLRRLAGRRWTTEGALVL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
+ D TRSQ N L+ +I A KP
Sbjct: 74 QCDETRSQVRNREIIRERLKELITAALKP 102
>gi|90412573|ref|ZP_01220575.1| hypothetical protein P3TCK_08071 [Photobacterium profundum 3TCK]
gi|90326381|gb|EAS42793.1| hypothetical protein P3TCK_08071 [Photobacterium profundum 3TCK]
Length = 137
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++IT RS G GGQ+VN VS+ + +RF + + L + K++L+ ++ +R+ KDG ++I
Sbjct: 14 EIEITAIRSQGAGGQNVNKVSSAIHLRFDIKRST-LPDFYKERLLRISDHRITKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ + R+Q+ N DA+ L+ I A
Sbjct: 73 KAQQFRTQEKNREDALQRLKEFIQAA 98
>gi|408672488|ref|YP_006872236.1| Class I peptide chain release factor [Emticicia oligotrophica DSM
17448]
gi|387854112|gb|AFK02209.1| Class I peptide chain release factor [Emticicia oligotrophica DSM
17448]
Length = 138
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
T EL+ SRS GPGGQ+VN V TKV++RF + A+ L ++ K +L+E KN+L ++
Sbjct: 10 FTPELEFQTSRSGGPGGQNVNKVETKVELRFDIAASTLLTDEQKTKLLERLKNQLVQERI 69
Query: 143 LIIKSDRTRSQ 153
L I + RSQ
Sbjct: 70 LSISAQEKRSQ 80
>gi|312078130|ref|XP_003141605.1| hypothetical protein LOAG_06021 [Loa loa]
Length = 206
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 35/161 (21%)
Query: 35 SSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFSYITEELDITYSRS 94
S + + P K L F+ + + +G +F G IPV ++++ + RS
Sbjct: 12 SQAIFQQPVDTTTKTTAALLFSCMFQPRDTNGDEFIGWIPV---------DKIEKRFMRS 62
Query: 95 SGPGGQHVNSV------------------STKVDIRFKVNAANWLNEDV----KKQLIEL 132
SGPGGQ+VN V +TK IRF +N ANWL+ + +K+ + L
Sbjct: 63 SGPGGQNVNMVFPVQLSIVVYCVLSEPMVNTKCQIRFNLNEANWLSSRIQDIFRKRFVRL 122
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
LNK ++I SD++R Q N D LR ++ + K
Sbjct: 123 ----LNKQHDVVISSDKSRIQAENQDDCFKKLRALLLECNK 159
>gi|126740950|ref|ZP_01756633.1| hypothetical protein RSK20926_07588 [Roseobacter sp. SK209-2-6]
gi|126717876|gb|EBA14595.1| hypothetical protein RSK20926_07588 [Roseobacter sp. SK209-2-6]
Length = 139
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L VK +L L R K+G +++
Sbjct: 14 ELSESFMRASGPGGQNVNKVSSAVELRFEAARSPALAPAVKSRLKRLAGRRWTKEGAILL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+ D TRSQ N L +I KA
Sbjct: 74 QCDETRSQTRNRELVRERLAELIRKA 99
>gi|83855346|ref|ZP_00948876.1| peptidyl-tRNA hydrolase domain protein [Sulfitobacter sp. NAS-14.1]
gi|83843189|gb|EAP82356.1| peptidyl-tRNA hydrolase domain protein [Sulfitobacter sp. NAS-14.1]
Length = 154
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + + VK +L L R +G L++
Sbjct: 28 ELTESFMRASGPGGQNVNKVSSAVELRFEAATSPSIPTPVKNRLRRLAGRRWTTEGALVL 87
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
+ D TRSQ N L+ +I A KP
Sbjct: 88 QCDETRSQVRNREIIRERLKELITAALKP 116
>gi|417403428|ref|ZP_12157626.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353628794|gb|EHC76747.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 140
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ ++ + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASG-LPEYYKQRLLTVSHHLISDDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEFRSQELNREAAIARLVAVI 95
>gi|330993100|ref|ZP_08317038.1| hypothetical protein SXCC_03000 [Gluconacetobacter sp. SXCC-1]
gi|329759870|gb|EGG76376.1| hypothetical protein SXCC_03000 [Gluconacetobacter sp. SXCC-1]
Length = 123
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSD 148
+TY +SGPGGQ+VN V+T +RF V + L K +L+ + +R+ DG +++ +
Sbjct: 1 MTYILASGPGGQNVNKVATAAQLRFDVRNSPSLPPRTKHRLVAVAGSRMTGDGVIVLTAR 60
Query: 149 RTRSQQLNLADAMTTLRNMIWKAA 172
R RSQ N DA+ L MI +A+
Sbjct: 61 RFRSQTRNREDAINRLHEMIGEAS 84
>gi|414077222|ref|YP_006996540.1| peptide chain release factor-like protein [Anabaena sp. 90]
gi|413970638|gb|AFW94727.1| peptide chain release factor-like protein [Anabaena sp. 90]
Length = 137
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
V+IP +++IT RS G GGQ+VN V+T + +RF + A+ L E K++L++L
Sbjct: 8 VIIP-----DSDMEITAIRSQGAGGQNVNKVATAIHLRFDI-CASSLPEIYKERLLKLKD 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
NR+ +G ++IK+ RSQ+ N +A L+ +I
Sbjct: 62 NRITLEGVVVIKAQEYRSQEQNKEEAFRRLQELI 95
>gi|78485220|ref|YP_391145.1| class I peptide chain release factor [Thiomicrospira crunogena
XCL-2]
gi|78363506|gb|ABB41471.1| Conserved hypothetical protein with peptidyl-tRNA hydrolase domain
[Thiomicrospira crunogena XCL-2]
Length = 138
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T RS G GGQ+VN V++ + +RF + AA+ L + K++L+ L +R+ K G ++I
Sbjct: 14 EIELTAIRSQGAGGQNVNKVASAIHLRFDI-AASSLPDFYKQRLLALQDSRITKQGIVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N A+ LR +I A
Sbjct: 73 KAQQFRTQEANRESALERLRMLIKSVA 99
>gi|126734066|ref|ZP_01749813.1| Class I peptide chain release factor [Roseobacter sp. CCS2]
gi|126716932|gb|EBA13796.1| Class I peptide chain release factor [Roseobacter sp. CCS2]
Length = 138
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +++RSSGPGGQ+VN VST V++RF+ + L VK +L L R +DG L++
Sbjct: 14 ELTESFTRSSGPGGQNVNKVSTAVELRFEAARSPNLPAQVKARLKRLAGRRWTQDGALVL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
TRSQ N A L +I +A KP +I+
Sbjct: 74 FVQDTRSQARNREIARERLAELIKRACEKPKRRIA 108
>gi|392542792|ref|ZP_10289929.1| hypothetical protein PpisJ2_13355 [Pseudoalteromonas piscicida JCM
20779]
Length = 137
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+DI+ R+ G GGQ+VN VS+ + +RF +N + L + K +L+ L +R+ K+G +++
Sbjct: 14 EIDISAIRAQGAGGQNVNKVSSAIHLRFDINRST-LPDFYKARLLALKDSRVTKEGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q+ N DA+ L+ +I +A K
Sbjct: 73 KAQSFRTQEQNKEDALERLKTLILEATK 100
>gi|261316565|ref|ZP_05955762.1| class I peptide chain release factor [Brucella pinnipedialis B2/94]
gi|265987638|ref|ZP_06100195.1| class I peptide chain release factor [Brucella pinnipedialis
M292/94/1]
gi|340791670|ref|YP_004757135.1| class I peptide chain release factor [Brucella pinnipedialis B2/94]
gi|261295788|gb|EEX99284.1| class I peptide chain release factor [Brucella pinnipedialis B2/94]
gi|264659835|gb|EEZ30096.1| class I peptide chain release factor [Brucella pinnipedialis
M292/94/1]
gi|340560129|gb|AEK55367.1| class I peptide chain release factor [Brucella pinnipedialis B2/94]
Length = 149
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++L+ + R+SGPGGQ+VN VST +RF A + L ED+ +L +L
Sbjct: 14 ITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAEQLRFHA-ARSGLPEDILSRLFKLAGQ 72
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ KDG ++I+++R R+Q+ N DA L +I
Sbjct: 73 KGTKDGDILIEANRFRTQERNREDARERLLALI 105
>gi|88800818|ref|ZP_01116374.1| hypothetical protein MED297_06544 [Reinekea blandensis MED297]
gi|88776458|gb|EAR07677.1| hypothetical protein MED297_06544 [Reinekea sp. MED297]
Length = 137
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
++LD + R+ G GGQ+VN VS+ + +R + ++ L E K++L+ L+ +R++KDG LI
Sbjct: 13 DDLDFSAIRAQGSGGQNVNKVSSAIHLRLDIPNSS-LPEFYKERLLALSDSRISKDGVLI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ R+Q+ N DA+ LR +I A K
Sbjct: 72 IKAQTFRTQEKNREDALNRLREIILNAIK 100
>gi|84621975|ref|YP_449347.1| peptidyl-tRNA hydrolase domain-containing protein [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|84365915|dbj|BAE67073.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 143
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ +G L+I + R R+Q N DA L +I
Sbjct: 68 RMTAEGVLVIDAQRFRTQDRNRGDARERLAEII 100
>gi|410995822|gb|AFV97287.1| hypothetical protein B649_04865 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 139
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++IT RS G GGQ+VN VST + +RF ++A+ L + K++L+ + +R+ K+G + I
Sbjct: 14 EIEITAIRSQGSGGQNVNKVSTAIHLRFDISAST-LPDFYKERLLAITDHRITKEGIINI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
KS +RSQ+ N A+ LR +I
Sbjct: 73 KSQESRSQEENKDAALERLRELI 95
>gi|423138761|ref|ZP_17126399.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379051315|gb|EHY69206.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 140
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASG-LPEYYKQRLLTASHHLISHDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A+ L
Sbjct: 73 KAQEYRSQELNREAAIARL 91
>gi|339998257|ref|YP_004729140.1| hypothetical protein SBG_0231 [Salmonella bongori NCTC 12419]
gi|339511618|emb|CCC29327.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 140
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASG-LPEYYKQRLLTASHHLISHDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A+ L
Sbjct: 73 KAQEYRSQELNREAAIARL 91
>gi|386311569|ref|YP_006007625.1| hypothetical protein [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418242601|ref|ZP_12869108.1| hypothetical protein IOK_14495 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433547844|ref|ZP_20503895.1| Hypothetical protein YaeJ with similarity to translation release
factor [Yersinia enterocolitica IP 10393]
gi|318606906|emb|CBY28404.1| hypothetical protein YaeJ with similarity to translation release
factor [Yersinia enterocolitica subsp. palearctica Y11]
gi|351777935|gb|EHB20117.1| hypothetical protein IOK_14495 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431791270|emb|CCO66935.1| Hypothetical protein YaeJ with similarity to translation release
factor [Yersinia enterocolitica IP 10393]
Length = 138
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLMTAEGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I ++
Sbjct: 73 KAQEYRSQDMNREAALVRLVALIRQS 98
>gi|407773163|ref|ZP_11120464.1| hypothetical protein TH2_04673 [Thalassospira profundimaris WP0211]
gi|407283627|gb|EKF09155.1| hypothetical protein TH2_04673 [Thalassospira profundimaris WP0211]
Length = 138
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
Y+ E L+ + R+SGPGGQ+VN VS+ V +R +++ L V+ +L EL ++L D
Sbjct: 9 YLDERHLNFQFVRASGPGGQNVNKVSSAVQMRVRIDDLTELPMRVRNRLRELAGSKLTND 68
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G +I + R R+Q+ N DA+ ++ KAA+
Sbjct: 69 GEIIFDAQRHRTQERNKQDAIERFLALLRKAAE 101
>gi|326800530|ref|YP_004318349.1| class I peptide chain release factor [Sphingobacterium sp. 21]
gi|326551294|gb|ADZ79679.1| Class I peptide chain release factor [Sphingobacterium sp. 21]
Length = 134
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 82 YITEELD--ITY--SRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
Y +EL I Y SRS G GGQHVN VS+KV+++F A NE+ K L + NRL
Sbjct: 2 YSIDELSPYIQYKTSRSGGSGGQHVNKVSSKVELQFDFEACKLWNEEEKTHLRQKLSNRL 61
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ +G L I S + RSQ N A A L +++ A+
Sbjct: 62 SSEGKLQIISQKDRSQFKNKASAQEKLLHILAAAS 96
>gi|400287613|ref|ZP_10789645.1| class I peptide chain release factor [Psychrobacter sp. PAMC 21119]
Length = 137
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ-LIELNKNRLNKDGYLI 144
+++I+ R+ G GGQ+VN VS+ + +RF ++A++ DV KQ L++ +R+ K+G LI
Sbjct: 14 DVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSL--SDVNKQRLLDSKDSRITKEGVLI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
IK+ + R+Q+ N DA L++ I KA
Sbjct: 72 IKAQQFRTQERNKIDAFERLQSFITKA 98
>gi|330448544|ref|ZP_08312192.1| putative-tRNA hydrolase domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492735|dbj|GAA06689.1| putative-tRNA hydrolase domain protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 137
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + + L K++L++L+ +R+ KDG ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAIHLRFDIKRST-LPTFYKERLLKLSDSRITKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ + R+Q++N +A+ L+++I A
Sbjct: 73 KAQQHRTQEMNREEALDRLKSLIQSA 98
>gi|428214790|ref|YP_007087934.1| protein chain release factor B [Oscillatoria acuminata PCC 6304]
gi|428003171|gb|AFY84014.1| protein chain release factor B [Oscillatoria acuminata PCC 6304]
Length = 137
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
S + E+ I+ RS G GGQ+VN V+T + +RF + A++ L E K +L+ + +R+ +
Sbjct: 8 VSILENEIQISAVRSQGAGGQNVNKVATAIHLRFDIKASS-LPERYKNRLLSRSDHRITQ 66
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+G +IIK+ +RSQ N +A+ L+ +I A
Sbjct: 67 EGVIIIKAQESRSQLENRQEALMRLQELIKSA 98
>gi|423118779|ref|ZP_17106463.1| hypothetical protein HMPREF9690_00785 [Klebsiella oxytoca 10-5246]
gi|376400845|gb|EHT13456.1| hypothetical protein HMPREF9690_00785 [Klebsiella oxytoca 10-5246]
Length = 137
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
VVIP EE+ ++ R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 8 VVIP-----DEEITLSGIRAQGAGGQHVNKASTAIHLRFDIKASS-LPEYYKERLLAASH 61
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG +IIK+ RSQ++N A++ L +I
Sbjct: 62 HLISADGVVIIKAQEYRSQEMNREAAISRLVALI 95
>gi|298206893|ref|YP_003715072.1| peptidyl-tRNA hydrolase [Croceibacter atlanticus HTCC2559]
gi|83849527|gb|EAP87395.1| peptidyl-tRNA hydrolase [Croceibacter atlanticus HTCC2559]
Length = 135
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
S + EE++ + SSGPGGQH N T V++R+ +N++ ++E + L+E +RL KD
Sbjct: 4 SQLIEEVEFNTTTSSGPGGQHANKTETAVELRWNINSSQAISEKERFILLEKLSSRLTKD 63
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
LII + +RSQ N + +I K AK P
Sbjct: 64 NVLIIVAQDSRSQHKNKDIVIKRFLELIKKNAKQKP 99
>gi|238763955|ref|ZP_04624911.1| hypothetical protein ykris0001_29320 [Yersinia kristensenii ATCC
33638]
gi|238697772|gb|EEP90533.1| hypothetical protein ykris0001_29320 [Yersinia kristensenii ATCC
33638]
Length = 138
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L E K++L+ LN + + +G +II
Sbjct: 14 EVELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPEYYKERLLLLNSHLMTAEGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A L +I +A
Sbjct: 73 KAQEYRSQDMNREAAQQRLVALIRQA 98
>gi|84393499|ref|ZP_00992254.1| hypothetical protein V12B01_13795 [Vibrio splendidus 12B01]
gi|84375852|gb|EAP92744.1| hypothetical protein V12B01_13795 [Vibrio splendidus 12B01]
Length = 136
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +T R+ G GGQ+VN VS+ + +RF + + L + K++L+ +R+ KDG +II
Sbjct: 14 ELQLTAIRAQGAGGQNVNKVSSAIHLRFDIKHST-LPDFYKEKLLAHKDSRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I +A K
Sbjct: 73 KAQQYRTQEQNRDDALVRLKELILEATK 100
>gi|209808854|ref|YP_002264392.1| peptidyl-tRNA hydrolase domain-containing protein [Aliivibrio
salmonicida LFI1238]
gi|208010416|emb|CAQ80766.1| putative peptidyl-tRNA hydrolase [Aliivibrio salmonicida LFI1238]
Length = 137
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF +N++ L K++L+++ +R+ K+G ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAIHLRFDINSST-LPPFYKERLLKMKDSRITKEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I AA+
Sbjct: 73 KAQQFRTQEKNREDALERLKVLIQSAAE 100
>gi|410633470|ref|ZP_11344114.1| ribosome-associated protein [Glaciecola arctica BSs20135]
gi|410146971|dbj|GAC20981.1| ribosome-associated protein [Glaciecola arctica BSs20135]
Length = 136
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
P + +D++ R+ G GGQ+VN VS+ + +RF + A + E VK++L+ R+
Sbjct: 5 PNLESLMPAIDLSAMRAQGAGGQNVNKVSSAIHLRFDIQLA-AIPEYVKQKLLSGKDKRI 63
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++G LIIK+ R+Q++N DA L ++ +A K
Sbjct: 64 TQEGILIIKAQSHRTQEMNKQDAFERLTEILVEAGK 99
>gi|188989645|ref|YP_001901655.1| peptidyl-tRNA hydrolase domain-containing protein [Xanthomonas
campestris pv. campestris str. B100]
gi|167731405|emb|CAP49580.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 143
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + E+ + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPNLAIPPSEIVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ DG L+I + R R+Q N DA L +I
Sbjct: 68 RMTADGVLVIDAQRFRTQDRNREDARERLAEII 100
>gi|86145426|ref|ZP_01063757.1| hypothetical protein MED222_05895 [Vibrio sp. MED222]
gi|85837003|gb|EAQ55123.1| hypothetical protein MED222_05895 [Vibrio sp. MED222]
Length = 136
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +T R+ G GGQ+VN VS+ + +RF + + L + K++L+ R+ KDG +II
Sbjct: 14 ELQLTAIRAQGAGGQNVNKVSSAIHLRFDIKHST-LPDFYKEKLLSHKDGRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I +A K
Sbjct: 73 KAQQYRTQEQNRDDALVRLKELILEATK 100
>gi|21241020|ref|NP_640602.1| peptidyl-tRNA hydrolase domain-containing protein [Xanthomonas
axonopodis pv. citri str. 306]
gi|294626412|ref|ZP_06705013.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667755|ref|ZP_06732965.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325925858|ref|ZP_08187227.1| protein chain release factor B [Xanthomonas perforans 91-118]
gi|346723171|ref|YP_004849840.1| peptidyl-tRNA hydrolase domain-containing protein [Xanthomonas
axonopodis pv. citrumelo F1]
gi|390991048|ref|ZP_10261322.1| RF-1 domain protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|418516009|ref|ZP_13082186.1| hypothetical protein MOU_04234 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418521184|ref|ZP_13087229.1| hypothetical protein WS7_09198 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|21106310|gb|AAM35138.1| peptidyl-tRNA hydrolase [Xanthomonas axonopodis pv. citri str. 306]
gi|292599297|gb|EFF43433.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602381|gb|EFF45822.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325543689|gb|EGD15103.1| protein chain release factor B [Xanthomonas perforans 91-118]
gi|346647918|gb|AEO40542.1| peptidyl-tRNA hydrolase domain protein [Xanthomonas axonopodis pv.
citrumelo F1]
gi|372554200|emb|CCF68297.1| RF-1 domain protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|410702733|gb|EKQ61233.1| hypothetical protein WS7_09198 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410707343|gb|EKQ65796.1| hypothetical protein MOU_04234 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 143
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ DG L+I + R R+Q N DA L +I
Sbjct: 68 RMTADGVLVIDAQRFRTQDRNRDDARERLVEII 100
>gi|293408284|ref|ZP_06652124.1| yaeJ protein [Escherichia coli B354]
gi|291472535|gb|EFF15017.1| yaeJ protein [Escherichia coli B354]
Length = 140
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ R+Q+LN A+ L
Sbjct: 73 KAQEYRNQELNREAALARL 91
>gi|428317533|ref|YP_007115415.1| Class I peptide chain release factor [Oscillatoria nigro-viridis
PCC 7112]
gi|428241213|gb|AFZ06999.1| Class I peptide chain release factor [Oscillatoria nigro-viridis
PCC 7112]
Length = 137
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ RS G GGQ+VN V++ + +RF + A++ L + K++L+++N R+ +G ++I
Sbjct: 14 EIEISAIRSQGAGGQNVNKVASAIHLRFDIPASS-LPDRYKQRLLQINDQRITSEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L+ +I A
Sbjct: 73 KAQEHRSQEQNREEALRRLQELIKSA 98
>gi|289664967|ref|ZP_06486548.1| peptidyl-tRNA hydrolase domain protein [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289669905|ref|ZP_06490980.1| peptidyl-tRNA hydrolase domain protein [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 143
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ DG L+I + R R+Q N DA L +I
Sbjct: 68 RMTADGVLVIDAQRFRTQDRNRDDARERLVEII 100
>gi|146306341|ref|YP_001186806.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
mendocina ymp]
gi|421502673|ref|ZP_15949626.1| hypothetical protein A471_05290 [Pseudomonas mendocina DLHK]
gi|145574542|gb|ABP84074.1| Class I peptide chain release factor [Pseudomonas mendocina ymp]
gi|400346657|gb|EJO95014.1| hypothetical protein A471_05290 [Pseudomonas mendocina DLHK]
Length = 137
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE++++ R+ G GGQ+VN VS+ V +RF A++ L K++L+ L +R+ G +I
Sbjct: 13 EEIELSAIRAQGAGGQNVNKVSSAVHLRFDSQASS-LPPFYKERLLALADSRITAGGVVI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N ADA+ L +I A K
Sbjct: 72 IKAQQYRTQEQNRADALERLAELIRSAGK 100
>gi|91209262|ref|YP_539248.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
UTI89]
gi|117622476|ref|YP_851389.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
APEC O1]
gi|218557133|ref|YP_002390046.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
S88]
gi|237704351|ref|ZP_04534832.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|331661263|ref|ZP_08362195.1| aminoacyl-tRNA hydrolase [Escherichia coli TA206]
gi|386597941|ref|YP_006099447.1| putative peptidyl-tRNA hydrolase [Escherichia coli IHE3034]
gi|386607284|ref|YP_006113584.1| peptidyl-tRNA hydrolase domain-containing protein [Escherichia coli
UM146]
gi|417082525|ref|ZP_11950831.1| hypothetical protein i01_00270 [Escherichia coli cloneA_i1]
gi|419699120|ref|ZP_14226743.1| hypothetical protein OQA_01167 [Escherichia coli SCI-07]
gi|419942373|ref|ZP_14458976.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HM605]
gi|422360909|ref|ZP_16441537.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 110-3]
gi|422380548|ref|ZP_16460726.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 57-2]
gi|422750418|ref|ZP_16804328.1| RF-1 domain-containing protein [Escherichia coli H252]
gi|422756534|ref|ZP_16810357.1| RF-1 domain-containing protein [Escherichia coli H263]
gi|422839807|ref|ZP_16887778.1| hypothetical protein ESPG_02464 [Escherichia coli H397]
gi|432356552|ref|ZP_19599800.1| ribosome-associated protein [Escherichia coli KTE4]
gi|432366050|ref|ZP_19609185.1| ribosome-associated protein [Escherichia coli KTE5]
gi|432572086|ref|ZP_19808580.1| ribosome-associated protein [Escherichia coli KTE55]
gi|432586521|ref|ZP_19822894.1| ribosome-associated protein [Escherichia coli KTE58]
gi|432596091|ref|ZP_19832381.1| ribosome-associated protein [Escherichia coli KTE62]
gi|432730914|ref|ZP_19965775.1| ribosome-associated protein [Escherichia coli KTE45]
gi|432757706|ref|ZP_19992240.1| ribosome-associated protein [Escherichia coli KTE22]
gi|432762465|ref|ZP_19996929.1| ribosome-associated protein [Escherichia coli KTE46]
gi|432777075|ref|ZP_20011331.1| ribosome-associated protein [Escherichia coli KTE59]
gi|432790775|ref|ZP_20024896.1| ribosome-associated protein [Escherichia coli KTE65]
gi|432819542|ref|ZP_20053257.1| ribosome-associated protein [Escherichia coli KTE118]
gi|432825671|ref|ZP_20059328.1| ribosome-associated protein [Escherichia coli KTE123]
gi|433003734|ref|ZP_20192173.1| ribosome-associated protein [Escherichia coli KTE227]
gi|433010941|ref|ZP_20199346.1| ribosome-associated protein [Escherichia coli KTE229]
gi|433152328|ref|ZP_20337302.1| ribosome-associated protein [Escherichia coli KTE176]
gi|433161974|ref|ZP_20346744.1| ribosome-associated protein [Escherichia coli KTE179]
gi|433166910|ref|ZP_20351596.1| ribosome-associated protein [Escherichia coli KTE180]
gi|91070836|gb|ABE05717.1| hypothetical protein YaeJ [Escherichia coli UTI89]
gi|115511600|gb|ABI99674.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218363902|emb|CAR01567.1| conserved hypothetical protein [Escherichia coli S88]
gi|226902263|gb|EEH88522.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|294490304|gb|ADE89060.1| putative peptidyl-tRNA hydrolase [Escherichia coli IHE3034]
gi|307629768|gb|ADN74072.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli UM146]
gi|315285276|gb|EFU44721.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 110-3]
gi|323950809|gb|EGB46686.1| RF-1 domain-containing protein [Escherichia coli H252]
gi|323955074|gb|EGB50850.1| RF-1 domain-containing protein [Escherichia coli H263]
gi|324008223|gb|EGB77442.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 57-2]
gi|331052305|gb|EGI24344.1| aminoacyl-tRNA hydrolase [Escherichia coli TA206]
gi|355353382|gb|EHG02550.1| hypothetical protein i01_00270 [Escherichia coli cloneA_i1]
gi|371608291|gb|EHN96847.1| hypothetical protein ESPG_02464 [Escherichia coli H397]
gi|380349762|gb|EIA38027.1| hypothetical protein OQA_01167 [Escherichia coli SCI-07]
gi|388422935|gb|EIL82484.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HM605]
gi|430880143|gb|ELC03464.1| ribosome-associated protein [Escherichia coli KTE4]
gi|430881157|gb|ELC04419.1| ribosome-associated protein [Escherichia coli KTE5]
gi|431111813|gb|ELE15704.1| ribosome-associated protein [Escherichia coli KTE55]
gi|431124422|gb|ELE27068.1| ribosome-associated protein [Escherichia coli KTE58]
gi|431134687|gb|ELE36636.1| ribosome-associated protein [Escherichia coli KTE62]
gi|431278928|gb|ELF69901.1| ribosome-associated protein [Escherichia coli KTE45]
gi|431297607|gb|ELF87257.1| ribosome-associated protein [Escherichia coli KTE22]
gi|431302417|gb|ELF91603.1| ribosome-associated protein [Escherichia coli KTE46]
gi|431331709|gb|ELG18955.1| ribosome-associated protein [Escherichia coli KTE59]
gi|431333787|gb|ELG20972.1| ribosome-associated protein [Escherichia coli KTE65]
gi|431371301|gb|ELG57086.1| ribosome-associated protein [Escherichia coli KTE118]
gi|431375055|gb|ELG60399.1| ribosome-associated protein [Escherichia coli KTE123]
gi|431518685|gb|ELH96139.1| ribosome-associated protein [Escherichia coli KTE227]
gi|431519153|gb|ELH96605.1| ribosome-associated protein [Escherichia coli KTE229]
gi|431679142|gb|ELJ45058.1| ribosome-associated protein [Escherichia coli KTE176]
gi|431693365|gb|ELJ58781.1| ribosome-associated protein [Escherichia coli KTE179]
gi|431695175|gb|ELJ60511.1| ribosome-associated protein [Escherichia coli KTE180]
Length = 140
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + E +IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGEFEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG ++IK+ R+Q+LN A+ L
Sbjct: 61 HHLISSDGVIVIKAQEYRNQELNREAALARL 91
>gi|416531148|ref|ZP_11745497.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416533173|ref|ZP_11746141.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416555609|ref|ZP_11759094.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|417449694|ref|ZP_12162806.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353637325|gb|EHC83166.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|363549676|gb|EHL34011.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363560426|gb|EHL44573.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363568457|gb|EHL52435.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
Length = 140
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ + + ++ DG +I
Sbjct: 13 DELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASG-LPEYYKQRLLTASHHLISDDGVII 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
IK+ RSQ+LN A+ L +I
Sbjct: 72 IKAQEFRSQELNREAAIARLVAVI 95
>gi|334118265|ref|ZP_08492355.1| Class I peptide chain release factor [Microcoleus vaginatus FGP-2]
gi|333460250|gb|EGK88860.1| Class I peptide chain release factor [Microcoleus vaginatus FGP-2]
Length = 137
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ RS G GGQ+VN V++ + +RF + A++ L + K++L+++N R+ +G ++I
Sbjct: 14 EIEISAIRSQGAGGQNVNKVASAIHLRFDIPASS-LPDRYKQRLLQINDQRITSEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L+ +I A
Sbjct: 73 KAQEHRSQEQNREEALRRLQELIKSA 98
>gi|334123353|ref|ZP_08497378.1| peptidyl-tRNA hydrolase domain protein [Enterobacter hormaechei
ATCC 49162]
gi|295098680|emb|CBK87770.1| Protein chain release factor B [Enterobacter cloacae subsp. cloacae
NCTC 9394]
gi|333390562|gb|EGK61694.1| peptidyl-tRNA hydrolase domain protein [Enterobacter hormaechei
ATCC 49162]
Length = 138
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ + + + +G ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKESLLAASHHLITSEGVMVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAAIARLVAVI 95
>gi|289805029|ref|ZP_06535658.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 121
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASG-LPEYYKQRLLTASHHLISDDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEFRSQELNREAAIARLVAVI 95
>gi|90415492|ref|ZP_01223426.1| hypothetical protein GB2207_09251 [gamma proteobacterium HTCC2207]
gi|90332815|gb|EAS47985.1| hypothetical protein GB2207_09251 [marine gamma proteobacterium
HTCC2207]
Length = 138
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ RS GPGGQ+VN VS+ + +RF + ++ L K++L++L R++K G L+I
Sbjct: 14 EIELSAVRSQGPGGQNVNKVSSAIHLRFDIKRSS-LPALFKQRLLKLRDQRISKGGVLVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ TRSQ+ N +A+ L ++ + +
Sbjct: 73 KAQTTRSQEKNRQEALDRLVQLLVEVS 99
>gi|378578239|ref|ZP_09826919.1| peptidyl-tRNA hydrolase [Pantoea stewartii subsp. stewartii DC283]
gi|377819348|gb|EHU02428.1| peptidyl-tRNA hydrolase [Pantoea stewartii subsp. stewartii DC283]
Length = 136
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + AA+ L K++L+ + + + DG +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDI-AASSLPPFYKERLLSASHHLITGDGTIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ RSQ++N A+ L N+I + K
Sbjct: 73 KAQEYRSQEMNREAALQRLVNLIQELTK 100
>gi|148559212|ref|YP_001259893.1| peptidyl-tRNA hydrolase domain-containing protein [Brucella ovis
ATCC 25840]
gi|148370469|gb|ABQ60448.1| peptidyl-tRNA hydrolase domain protein [Brucella ovis ATCC 25840]
Length = 178
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S ++L+ + R+S PGGQ+VN VST V +RF A + L ED+ +L +L
Sbjct: 43 ITRRLSIHEDDLEEAFIRASSPGGQNVNKVSTAVQLRFHA-ARSGLPEDILSRLFKLAGQ 101
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ KDG ++I+++R R+Q+ N DA L +I
Sbjct: 102 KGTKDGDILIEANRFRTQERNREDARERLLALI 134
>gi|218676575|ref|YP_002395394.1| Similar to Protein chain release factor B [Vibrio splendidus LGP32]
gi|218324843|emb|CAV26573.1| Similar to Protein chain release factor B [Vibrio splendidus LGP32]
Length = 136
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +T R+ G GGQ+VN VS+ + +RF + + L + K++L+ R+ KDG +II
Sbjct: 14 ELQLTAIRAQGAGGQNVNKVSSAIHLRFDIKHST-LPDFYKEKLLAHKDGRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I +A K
Sbjct: 73 KAQQYRTQEQNRDDALVRLKELILEATK 100
>gi|329298699|ref|ZP_08256035.1| hypothetical protein Pstas_23359 [Plautia stali symbiont]
Length = 122
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIK 146
++++ R+ G GGQHVN ST + +RF ++A++ L K++L+E N + ++ DG +IIK
Sbjct: 1 MELSAIRAQGAGGQHVNKTSTAIHLRFDIHASS-LPPFYKQRLLEANHHLISADGVVIIK 59
Query: 147 SDRTRSQQLNLADAMTTLRNMI 168
+ RSQ++N A+ L N+I
Sbjct: 60 AQEYRSQEMNREAALQRLINLI 81
>gi|390573182|ref|ZP_10253369.1| hypothetical protein WQE_32351 [Burkholderia terrae BS001]
gi|389934914|gb|EIM96855.1| hypothetical protein WQE_32351 [Burkholderia terrae BS001]
Length = 135
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF V A++ L E +K +L+ ++ R+ +DG +II
Sbjct: 11 EIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASS-LPEVLKMRLLAMSDYRITRDGIVII 69
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q++N A+ L +I
Sbjct: 70 KAQEYRTQEMNRVAALARLDALI 92
>gi|332662194|ref|YP_004444982.1| class I peptide chain release factor [Haliscomenobacter hydrossis
DSM 1100]
gi|332331008|gb|AEE48109.1| Class I peptide chain release factor [Haliscomenobacter hydrossis
DSM 1100]
Length = 139
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 82 YITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDG 141
I +EL SRSSG GGQ+VN V T+V+ F+VN + LNE+ K + +R++K+G
Sbjct: 5 QIQKELKFRTSRSSGSGGQNVNKVETRVEALFEVNTSEGLNEEEKAIVAAKLASRISKEG 64
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L S +R+QQ N A+ L ++ A
Sbjct: 65 LLSAVSQESRTQQSNREKAIKKLLTLLETA 94
>gi|83591437|ref|YP_425189.1| class I peptide chain release factor [Rhodospirillum rubrum ATCC
11170]
gi|386348118|ref|YP_006046366.1| class I peptide chain release factor [Rhodospirillum rubrum F11]
gi|83574351|gb|ABC20902.1| Class I peptide chain release factor [Rhodospirillum rubrum ATCC
11170]
gi|346716554|gb|AEO46569.1| class I peptide chain release factor [Rhodospirillum rubrum F11]
Length = 140
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 72 VIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIE 131
+IP+ P + E++ + RSSGPGGQ+VN VST V +RF V + L VK +L
Sbjct: 1 MIPIT-PTIALDDAEIEERFIRSSGPGGQNVNKVSTAVQLRFDVAGSPNLPGWVKHRLSV 59
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
L +RL +G L++ + R+Q+ N +A+ L +I A
Sbjct: 60 LAGSRLTGEGVLVLTAQSQRTQEANRREAVERLVALIQAAC 100
>gi|33593628|ref|NP_881272.1| peptidyl-tRNA hydrolase domain-containing protein [Bordetella
pertussis Tohama I]
gi|33595904|ref|NP_883547.1| peptidyl-tRNA hydrolase domain-containing protein [Bordetella
parapertussis 12822]
gi|33597646|ref|NP_885289.1| peptidyl-tRNA hydrolase domain-containing protein [Bordetella
parapertussis 12822]
gi|33602050|ref|NP_889610.1| peptidyl-tRNA hydrolase domain-containing protein [Bordetella
bronchiseptica RB50]
gi|384204919|ref|YP_005590658.1| peptidyl-tRNA hydrolase domain-containing protein [Bordetella
pertussis CS]
gi|408416298|ref|YP_006627005.1| hypothetical protein BN118_2470 [Bordetella pertussis 18323]
gi|410473374|ref|YP_006896655.1| hypothetical protein BN117_2809 [Bordetella parapertussis Bpp5]
gi|412338202|ref|YP_006966957.1| hypothetical protein BN112_0876 [Bordetella bronchiseptica 253]
gi|427814324|ref|ZP_18981388.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427821730|ref|ZP_18988792.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33563701|emb|CAE42934.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33565983|emb|CAE36534.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33574074|emb|CAE38398.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33576488|emb|CAE33566.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332383033|gb|AEE67880.1| peptidyl-tRNA hydrolase domain protein [Bordetella pertussis CS]
gi|401778468|emb|CCJ63895.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408443484|emb|CCJ50142.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408768036|emb|CCJ52794.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410565324|emb|CCN22879.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410586995|emb|CCN02025.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 138
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 82 YITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
Y+ E ELD R+ G GGQ+VN VS+ + +RF V A++ L + VK+ ++ L R++ D
Sbjct: 9 YLDERELDFDMIRAQGAGGQNVNKVSSAIHLRFDVRASS-LPDSVKETVLALADRRISSD 67
Query: 141 GYLIIKSDRTRSQQLNLADAM 161
G ++IK+ RSQ+ N ADA+
Sbjct: 68 GVIVIKAQTHRSQEKNRADAV 88
>gi|299750278|ref|XP_002911475.1| hypothetical protein CC1G_14473 [Coprinopsis cinerea okayama7#130]
gi|298408828|gb|EFI27981.1| hypothetical protein CC1G_14473 [Coprinopsis cinerea okayama7#130]
Length = 207
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 28 LDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLKFNGVIPVVIPRFSYITEEL 87
L +LY SS+ T D V PD +GV K+ + P F +
Sbjct: 20 LCRLYATSSLPTPPATTD-VPKPDSKDASGV--------HKWAEEFKALNPDFLRDAPGV 70
Query: 88 DITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKS 147
+++SRSSGPGGQ+VN V+TKV +R +N+ W+ + +K ++ + + + L++ S
Sbjct: 71 SLSFSRSSGPGGQNVNKVNTKVSLRCDLNSP-WIPQWARKDFVK-DPHYVASTHTLLVTS 128
Query: 148 DRTRSQQLNLADAMTTLRNMIWKAA 172
TRSQ N+ D + L+N+I A
Sbjct: 129 TFTRSQAQNIDDCLEKLKNLILSVA 153
>gi|152992337|ref|YP_001358058.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
gi|151424198|dbj|BAF71701.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
Length = 140
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I+ R+ G GGQ VN VS + +RF + AA+ L K++L+ L R++KDG ++I
Sbjct: 16 EIEISAIRAQGSGGQKVNKVSAAIHLRFDI-AASSLPAFYKEKLLALKDKRISKDGIVVI 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
KS + RSQ+ N +A+ L +I
Sbjct: 75 KSQQHRSQEQNREEALERLVELI 97
>gi|238792731|ref|ZP_04636362.1| hypothetical protein yinte0001_4840 [Yersinia intermedia ATCC
29909]
gi|238727839|gb|EEQ19362.1| hypothetical protein yinte0001_4840 [Yersinia intermedia ATCC
29909]
Length = 138
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + A++ L + K++L+ LN + + +G +II
Sbjct: 14 EIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASS-LPDYYKERLLLLNSHLMTAEGIVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ +N A+ L +I +A
Sbjct: 73 KAQEYRSQDMNREAALARLVALIRQA 98
>gi|437830786|ref|ZP_20844281.1| hypothetical protein SEEERB17_022639 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435303452|gb|ELO79327.1| hypothetical protein SEEERB17_022639 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
Length = 140
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASG-LPEYYKQRLLTASHHLISDDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEFRSQELNREAAIARLVAVI 95
>gi|381179804|ref|ZP_09888651.1| Class I peptide chain release factor [Treponema saccharophilum DSM
2985]
gi|380768282|gb|EIC02274.1| Class I peptide chain release factor [Treponema saccharophilum DSM
2985]
Length = 137
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
ITE+ +T+SRS G GGQ+VN V+TKV I V+ + E+ + +L E +N DG+
Sbjct: 10 ITEKSQLTFSRSGGKGGQNVNKVNTKVHIALSVSDVAGITEEERGRLCEKLSPIINADGF 69
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+ I + RSQ+LN A L N I A
Sbjct: 70 ITISVEDERSQELNRKIAYARLENRIETA 98
>gi|392421506|ref|YP_006458110.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri CCUG 29243]
gi|452746094|ref|ZP_21945922.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri NF13]
gi|390983694|gb|AFM33687.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri CCUG 29243]
gi|452010049|gb|EME02254.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri NF13]
Length = 137
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + A++ L K++L+ L +R+ +G ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSALHLRFDIQASS-LPPFYKERLLALRDSRITSEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R R+Q+ N DA+ L +I AK
Sbjct: 73 KAQRYRTQEQNRLDALERLAELIRSVAK 100
>gi|168823089|ref|ZP_02835089.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|409248666|ref|YP_006884507.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|205340613|gb|EDZ27377.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320084494|emb|CBY94287.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 140
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I + EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ +
Sbjct: 2 IAISRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIR-ASGLPEYYKQRLLTAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG +IIK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISDDGVIIIKAQEFRSQELNREAAIARLVAVI 95
>gi|374331609|ref|YP_005081793.1| class I peptide chain release factor [Pseudovibrio sp. FO-BEG1]
gi|359344397|gb|AEV37771.1| Class I peptide chain release factor [Pseudovibrio sp. FO-BEG1]
Length = 150
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
V RFS ++ + R+SGPGGQ+VN VS+ V +RF ++ L +D+K +L ++ +
Sbjct: 15 VNERFSIEERDIKEDFIRASGPGGQNVNKVSSAVQLRFNLDGNTTLPDDLKSRLRKIAGS 74
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
RL G +++ +DR R+Q+ N +A+ L +I KAA
Sbjct: 75 RLTLKGEIVLTADRFRTQERNREEALERLLELIRKAA 111
>gi|416423060|ref|ZP_11690638.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416429697|ref|ZP_11694759.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416439423|ref|ZP_11700142.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416446680|ref|ZP_11705192.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416454870|ref|ZP_11710495.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416458302|ref|ZP_11712904.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416469240|ref|ZP_11718453.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416479066|ref|ZP_11721962.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416494749|ref|ZP_11728376.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416495271|ref|ZP_11728453.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416508018|ref|ZP_11735815.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416512449|ref|ZP_11737773.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416547440|ref|ZP_11754612.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416561817|ref|ZP_11761747.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416578114|ref|ZP_11770334.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416588204|ref|ZP_11776740.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416592354|ref|ZP_11779164.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416600572|ref|ZP_11784519.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416608804|ref|ZP_11789536.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416612963|ref|ZP_11791900.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416622440|ref|ZP_11797004.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416633076|ref|ZP_11801714.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416645007|ref|ZP_11807221.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416652238|ref|ZP_11811559.1| hypothetical protein SEEM020_003465 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416657485|ref|ZP_11813701.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416667587|ref|ZP_11818316.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416673069|ref|ZP_11820777.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416694793|ref|ZP_11827389.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416708046|ref|ZP_11832908.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416710534|ref|ZP_11834639.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416717325|ref|ZP_11839577.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416726658|ref|ZP_11846719.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416727930|ref|ZP_11847419.1| hypothetical protein SEEM9199_18642 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416739527|ref|ZP_11853930.1| hypothetical protein SEEM8282_19849 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416749831|ref|ZP_11859462.1| hypothetical protein SEEM8283_01112 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416754199|ref|ZP_11861177.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416763372|ref|ZP_11867046.1| hypothetical protein SEEM8285_04625 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416767845|ref|ZP_11870221.1| hypothetical protein SEEM8287_04917 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|418483965|ref|ZP_13052970.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418491556|ref|ZP_13058072.1| hypothetical protein SEEM5278_09138 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418495153|ref|ZP_13061598.1| hypothetical protein SEEM5318_01781 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418501473|ref|ZP_13067862.1| hypothetical protein SEEM5320_20106 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504193|ref|ZP_13070552.1| hypothetical protein SEEM5321_14928 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418508851|ref|ZP_13075153.1| hypothetical protein SEEM5327_13182 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418524288|ref|ZP_13090275.1| hypothetical protein SEEM8286_11952 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|322616064|gb|EFY12981.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620847|gb|EFY17707.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623802|gb|EFY20639.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627250|gb|EFY24041.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322630557|gb|EFY27321.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322638225|gb|EFY34926.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640710|gb|EFY37361.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645506|gb|EFY42033.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648201|gb|EFY44668.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322657151|gb|EFY53434.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657521|gb|EFY53793.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663841|gb|EFY60041.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666674|gb|EFY62852.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672168|gb|EFY68280.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676521|gb|EFY72592.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322679387|gb|EFY75432.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686286|gb|EFY82270.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323193466|gb|EFZ78674.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197512|gb|EFZ82647.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201219|gb|EFZ86288.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323212134|gb|EFZ96958.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216439|gb|EGA01165.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323223371|gb|EGA07706.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225932|gb|EGA10152.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228527|gb|EGA12656.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236860|gb|EGA20936.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239640|gb|EGA23687.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242313|gb|EGA26342.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249975|gb|EGA33871.1| hypothetical protein SEEM9199_18642 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252405|gb|EGA36256.1| hypothetical protein SEEM8282_19849 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323255688|gb|EGA39441.1| hypothetical protein SEEM8283_01112 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262875|gb|EGA46425.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265361|gb|EGA48857.1| hypothetical protein SEEM8285_04625 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323271852|gb|EGA55270.1| hypothetical protein SEEM8287_04917 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|363553011|gb|EHL37288.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363569413|gb|EHL53367.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363573668|gb|EHL57545.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|366060194|gb|EHN24459.1| hypothetical protein SEEM5318_01781 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366060489|gb|EHN24752.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366061677|gb|EHN25922.1| hypothetical protein SEEM5278_09138 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366066987|gb|EHN31145.1| hypothetical protein SEEM5320_20106 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366072521|gb|EHN36613.1| hypothetical protein SEEM5321_14928 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366079341|gb|EHN43328.1| hypothetical protein SEEM5327_13182 [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366826842|gb|EHN53752.1| hypothetical protein SEEM020_003465 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207950|gb|EHP21447.1| hypothetical protein SEEM8286_11952 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
Length = 140
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I + EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ +
Sbjct: 2 IAISRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIR-ASGLPEYYKQRLLTAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG +IIK+ RSQ+LN A+ L
Sbjct: 61 HHLISDDGVIIIKAQEFRSQELNREAAIARL 91
>gi|401762386|ref|YP_006577393.1| hypothetical protein ECENHK_04410 [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400173920|gb|AFP68769.1| hypothetical protein ECENHK_04410 [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 140
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ + + + +G ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKESLLAASHHLITSEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAAIARLVAVI 95
>gi|419956556|ref|ZP_14472623.1| hypothetical protein PGS1_00752 [Enterobacter cloacae subsp.
cloacae GS1]
gi|388608313|gb|EIM37516.1| hypothetical protein PGS1_00752 [Enterobacter cloacae subsp.
cloacae GS1]
Length = 138
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN ST + +RF + A++ L E K+ L+ + + + +G ++I
Sbjct: 14 ELEITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKESLLAASHHLITSEGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAAIARLVAVI 95
>gi|21229705|ref|NP_635622.1| peptidyl-tRNA hydrolase domain-containing protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66766582|ref|YP_241344.1| peptidyl-tRNA hydrolase domain-containing protein [Xanthomonas
campestris pv. campestris str. 8004]
gi|384429909|ref|YP_005639270.1| peptidyl-tRNA hydrolase domain [Xanthomonas campestris pv. raphani
756C]
gi|21111190|gb|AAM39546.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66571914|gb|AAY47324.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. campestris str.
8004]
gi|341939013|gb|AEL09152.1| peptidyl-tRNA hydrolase domain, putative [Xanthomonas campestris
pv. raphani 756C]
Length = 143
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + E+ + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPNLAIPPGEIVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ DG L+I + R R+Q N DA L +I
Sbjct: 68 RMTADGVLVIDAQRFRTQDRNREDARERLAEII 100
>gi|325920611|ref|ZP_08182524.1| protein chain release factor B [Xanthomonas gardneri ATCC 19865]
gi|325548902|gb|EGD19843.1| protein chain release factor B [Xanthomonas gardneri ATCC 19865]
Length = 143
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + E+ + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPSLTIPPSEIVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ DG L+I + R R+Q N DA L +I
Sbjct: 68 RMTADGVLVIDAQRFRTQDRNREDARERLVEII 100
>gi|163744943|ref|ZP_02152303.1| hypothetical protein OIHEL45_05130 [Oceanibulbus indolifex HEL-45]
gi|161381761|gb|EDQ06170.1| hypothetical protein OIHEL45_05130 [Oceanibulbus indolifex HEL-45]
Length = 140
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L + VK +L L R +G L++
Sbjct: 14 ELTESFMRASGPGGQNVNKVSSAVELRFEAATSPSLAQPVKNRLRRLAGRRWTTEGALVL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
+ D TRSQ N L +I A P
Sbjct: 74 QCDETRSQARNRELVRERLAELIRTALTP 102
>gi|440232103|ref|YP_007345896.1| protein chain release factor B [Serratia marcescens FGI94]
gi|440053808|gb|AGB83711.1| protein chain release factor B [Serratia marcescens FGI94]
Length = 137
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+ +T R+ G GGQHVN ST + +RF + A++ L E K++L+ + + +G ++
Sbjct: 13 HEIVLTAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPEYYKERLLAFTHHLITSEGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
IK+ RSQ+LN A+ L +I +A
Sbjct: 72 IKAQEYRSQELNREAALARLVALIHQA 98
>gi|204926867|ref|ZP_03218069.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|374999978|ref|ZP_09724319.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|416572667|ref|ZP_11767412.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|417355762|ref|ZP_12131487.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417472507|ref|ZP_12168190.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|452121453|ref|YP_007471701.1| hypothetical protein CFSAN001992_09775 [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|204323532|gb|EDZ08727.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|353078196|gb|EHB43955.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353598006|gb|EHC54559.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353653988|gb|EHC95387.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|363573219|gb|EHL57106.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|451910457|gb|AGF82263.1| hypothetical protein CFSAN001992_09775 [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 140
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASG-LPEYYKQRLLTASHHLISDDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ+LN A+ L
Sbjct: 73 KAQEFRSQELNREAAIARL 91
>gi|339483240|ref|YP_004695026.1| Class I peptide chain release factor [Nitrosomonas sp. Is79A3]
gi|338805385|gb|AEJ01627.1| Class I peptide chain release factor [Nitrosomonas sp. Is79A3]
Length = 138
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++I RS G GGQ+VN VST + +RF + A++ L E K++L+ N +R++ +G +II
Sbjct: 14 EIEIQAIRSQGSGGQNVNKVSTAIHLRFDIKASS-LPEIYKERLLYSNDSRISSEGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R RSQ N DA+ L +I
Sbjct: 73 KAQRYRSQIKNKEDALNRLLEII 95
>gi|58424563|gb|AAW73600.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 176
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 41 ITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 100
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ +G L+I + R R+Q N DA L +I
Sbjct: 101 RMTAEGVLVIDAQRFRTQDRNRDDARERLAEII 133
>gi|164414764|pdb|2JY9|A Chain A, Nmr Structure Of Putative Trna Hydrolase Domain From
Salmonella Typhimurium. Northeast Structural Genomics
Consortium Target Str220
Length = 148
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I + EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ +
Sbjct: 2 IAISRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIR-ASGLPEYYKQRLLTAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG +IIK+ RSQ+LN A+ L
Sbjct: 61 HHLISDDGVIIIKAQEFRSQELNREAAIARL 91
>gi|16759231|ref|NP_454848.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29140780|ref|NP_804122.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213028871|ref|ZP_03343318.1| hypothetical protein Salmonelentericaenterica_44358 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213161619|ref|ZP_03347329.1| hypothetical protein Salmoneentericaenterica_17067 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213423698|ref|ZP_03356678.1| hypothetical protein Salmonentericaenterica_40183 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213428150|ref|ZP_03360900.1| hypothetical protein SentesTyphi_22790 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213584325|ref|ZP_03366151.1| hypothetical protein SentesTyph_25140 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213646231|ref|ZP_03376284.1| hypothetical protein SentesTy_02100 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850219|ref|ZP_03381117.1| hypothetical protein SentesT_00953 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289830086|ref|ZP_06547526.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|378958387|ref|YP_005215873.1| hypothetical protein STBHUCCB_2640 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25369510|pir||AC0532 probable release factor STY0265 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501522|emb|CAD08699.1| putative release factor [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136404|gb|AAO67971.1| putative release factor [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374352259|gb|AEZ44020.1| hypothetical protein STBHUCCB_2640 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 140
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I + EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ +
Sbjct: 2 IAISRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIR-ASGLPEYYKQRLLTAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG +IIK+ RSQ+LN A+ L
Sbjct: 61 HHLISDDGVIIIKAQEFRSQELNREAAIARL 91
>gi|16763630|ref|NP_459245.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62178810|ref|YP_215227.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161612615|ref|YP_001586580.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167553345|ref|ZP_02347094.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167990129|ref|ZP_02571229.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168230551|ref|ZP_02655609.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168235022|ref|ZP_02660080.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168245010|ref|ZP_02669942.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264649|ref|ZP_02686622.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168464194|ref|ZP_02698097.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|194446732|ref|YP_002039480.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194450266|ref|YP_002044230.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194471764|ref|ZP_03077748.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736606|ref|YP_002113263.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197251225|ref|YP_002145245.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197263410|ref|ZP_03163484.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198243513|ref|YP_002214201.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200388576|ref|ZP_03215188.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|207855758|ref|YP_002242409.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|224582087|ref|YP_002635885.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911306|ref|ZP_04655143.1| hypothetical protein SentesTe_09240 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|374979733|ref|ZP_09721066.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|375113118|ref|ZP_09758288.1| Class I peptide chain release factor [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375117677|ref|ZP_09762844.1| Class I peptide chain release factor [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|378443693|ref|YP_005231325.1| putative release factor [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378448553|ref|YP_005235912.1| hypothetical protein STM14_0282 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378698219|ref|YP_005180176.1| putative release factor [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378954049|ref|YP_005211536.1| putative release factor [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378982782|ref|YP_005245937.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378987645|ref|YP_005250809.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379699461|ref|YP_005241189.1| hypothetical protein STM474_0249 [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383495064|ref|YP_005395753.1| release factor [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386590132|ref|YP_006086532.1| YaeJ translation release factor [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417324095|ref|ZP_12110442.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|417331332|ref|ZP_12115610.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417339393|ref|ZP_12120967.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417346410|ref|ZP_12126272.1| Putative translation release factor [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|417363532|ref|ZP_12136714.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417371000|ref|ZP_12141698.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417378742|ref|ZP_12147309.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|417388328|ref|ZP_12152490.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417502012|ref|ZP_12173881.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|417524637|ref|ZP_12184294.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|417536803|ref|ZP_12189855.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|418510774|ref|ZP_13077051.1| hypothetical protein SEEPO729_14869 [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|418762712|ref|ZP_13318839.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418768612|ref|ZP_13324660.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418770314|ref|ZP_13326335.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418777570|ref|ZP_13333497.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418779929|ref|ZP_13335824.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418786564|ref|ZP_13342377.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418787271|ref|ZP_13343074.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418792851|ref|ZP_13348591.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418798623|ref|ZP_13354298.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418803975|ref|ZP_13359587.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|418805936|ref|ZP_13361514.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418810297|ref|ZP_13365838.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418816277|ref|ZP_13371769.1| hypothetical protein SEEN538_11823 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418821003|ref|ZP_13376434.1| hypothetical protein SEEN425_02526 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418826114|ref|ZP_13381362.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418829527|ref|ZP_13384500.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418835429|ref|ZP_13390322.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418842930|ref|ZP_13397739.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418847475|ref|ZP_13402233.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418849195|ref|ZP_13403928.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418854689|ref|ZP_13409356.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418857369|ref|ZP_13411998.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418862085|ref|ZP_13416630.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418870336|ref|ZP_13424757.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419731704|ref|ZP_14258614.1| hypothetical protein SEEH1579_13183 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419735991|ref|ZP_14262853.1| hypothetical protein SEEH1563_16514 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419740016|ref|ZP_14266753.1| hypothetical protein SEEH1573_08249 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419743755|ref|ZP_14270419.1| hypothetical protein SEEH1566_00743 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419748612|ref|ZP_14275106.1| hypothetical protein SEEH1565_17432 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|419788791|ref|ZP_14314475.1| hypothetical protein SEENLE01_13600 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419791446|ref|ZP_14317098.1| hypothetical protein SEENLE15_10024 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421356737|ref|ZP_15807057.1| hypothetical protein SEEE3139_01776 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421363172|ref|ZP_15813415.1| hypothetical protein SEEE0166_11139 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421366235|ref|ZP_15816440.1| hypothetical protein SEEE0631_03568 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421371153|ref|ZP_15821313.1| hypothetical protein SEEE0424_05625 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421374739|ref|ZP_15824860.1| hypothetical protein SEEE3076_00834 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421381963|ref|ZP_15832016.1| hypothetical protein SEEE4917_14322 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421386200|ref|ZP_15836214.1| hypothetical protein SEEE6622_12956 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421390935|ref|ZP_15840908.1| hypothetical protein SEEE6670_14031 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421394369|ref|ZP_15844309.1| hypothetical protein SEEE6426_08607 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421399275|ref|ZP_15849171.1| hypothetical protein SEEE6437_11090 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421403453|ref|ZP_15853298.1| hypothetical protein SEEE7246_09360 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421406688|ref|ZP_15856500.1| hypothetical protein SEEE7250_02901 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421413734|ref|ZP_15863484.1| hypothetical protein SEEE1427_15635 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421417265|ref|ZP_15866976.1| hypothetical protein SEEE2659_10726 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421422905|ref|ZP_15872569.1| hypothetical protein SEEE1757_16454 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421426231|ref|ZP_15875860.1| hypothetical protein SEEE5101_10477 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421431683|ref|ZP_15881265.1| hypothetical protein SEEE8B1_15188 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421433562|ref|ZP_15883120.1| hypothetical protein SEEE5518_01332 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421439698|ref|ZP_15889179.1| hypothetical protein SEEE1618_09438 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421443033|ref|ZP_15892476.1| hypothetical protein SEEE3079_03261 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421448850|ref|ZP_15898235.1| hypothetical protein SEEE6482_09919 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421571416|ref|ZP_16017094.1| hypothetical protein CFSAN00322_14531 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421575676|ref|ZP_16021285.1| hypothetical protein CFSAN00325_12713 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421578289|ref|ZP_16023867.1| hypothetical protein CFSAN00326_02753 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421583615|ref|ZP_16029131.1| hypothetical protein CFSAN00328_06530 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422024362|ref|ZP_16370852.1| hypothetical protein B571_01240 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422029379|ref|ZP_16375648.1| hypothetical protein B572_01310 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427544824|ref|ZP_18926156.1| hypothetical protein B576_01320 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427560690|ref|ZP_18930920.1| hypothetical protein B577_00980 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427580157|ref|ZP_18935709.1| hypothetical protein B573_00985 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427601675|ref|ZP_18940522.1| hypothetical protein B574_00990 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427626395|ref|ZP_18945431.1| hypothetical protein B575_01365 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427649386|ref|ZP_18950186.1| hypothetical protein B578_00970 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427659581|ref|ZP_18955139.1| hypothetical protein B579_01835 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427664693|ref|ZP_18959885.1| hypothetical protein B580_01270 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427693095|ref|ZP_18964778.1| hypothetical protein B581_01555 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|436604689|ref|ZP_20513294.1| hypothetical protein SEE22704_07973 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436647039|ref|ZP_20516595.1| hypothetical protein SEE30663_00557 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436795926|ref|ZP_20522644.1| hypothetical protein SEECHS44_05080 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436806745|ref|ZP_20526900.1| hypothetical protein SEEE1882_03703 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812942|ref|ZP_20531274.1| hypothetical protein SEEE1884_02963 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436831107|ref|ZP_20535817.1| hypothetical protein SEEE1594_03119 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436852397|ref|ZP_20542718.1| hypothetical protein SEEE1566_15239 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855689|ref|ZP_20544847.1| hypothetical protein SEEE1580_03338 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436866188|ref|ZP_20551964.1| hypothetical protein SEEE1543_16829 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870859|ref|ZP_20554494.1| hypothetical protein SEEE1441_07016 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436877142|ref|ZP_20558309.1| hypothetical protein SEEE1810_03651 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887329|ref|ZP_20563666.1| hypothetical protein SEEE1558_07934 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436895309|ref|ZP_20568372.1| hypothetical protein SEEE1018_08817 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436902264|ref|ZP_20573093.1| hypothetical protein SEEE1010_10115 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436909152|ref|ZP_20576040.1| hypothetical protein SEEE1729_02373 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436916943|ref|ZP_20580602.1| hypothetical protein SEEE0895_02628 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436924083|ref|ZP_20585231.1| hypothetical protein SEEE0899_03112 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436933454|ref|ZP_20589661.1| hypothetical protein SEEE1457_02728 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436940167|ref|ZP_20594175.1| hypothetical protein SEEE1747_02963 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436952609|ref|ZP_20601181.1| hypothetical protein SEEE0968_15650 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436958870|ref|ZP_20603405.1| hypothetical protein SEEE1444_03925 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436972322|ref|ZP_20610324.1| hypothetical protein SEEE1445_16155 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436978689|ref|ZP_20612692.1| hypothetical protein SEEE1559_05511 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436988477|ref|ZP_20616227.1| hypothetical protein SEEE1565_00517 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437003340|ref|ZP_20621520.1| hypothetical protein SEEE1808_04693 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437023168|ref|ZP_20628916.1| hypothetical protein SEEE1811_19305 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437036692|ref|ZP_20633971.1| hypothetical protein SEEE0956_22019 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437039966|ref|ZP_20634411.1| hypothetical protein SEEE1455_01272 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437048537|ref|ZP_20639551.1| hypothetical protein SEEE1575_04682 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437059987|ref|ZP_20646150.1| hypothetical protein SEEE1725_15587 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437064504|ref|ZP_20648525.1| hypothetical protein SEEE1745_04670 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437073125|ref|ZP_20652935.1| hypothetical protein SEEE1791_04119 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437080744|ref|ZP_20657284.1| hypothetical protein SEEE1795_03486 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437093745|ref|ZP_20664062.1| hypothetical protein SEEE6709_15208 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437113202|ref|ZP_20668678.1| hypothetical protein SEEE9058_15646 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437120666|ref|ZP_20671440.1| hypothetical protein SEEE0816_06881 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437130339|ref|ZP_20676508.1| hypothetical protein SEEE0819_09690 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437138411|ref|ZP_20680935.1| hypothetical protein SEEE3072_09247 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437143121|ref|ZP_20684133.1| hypothetical protein SEEE3089_02528 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437152976|ref|ZP_20690228.1| hypothetical protein SEEE9163_10532 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437159551|ref|ZP_20694043.1| hypothetical protein SEEE151_07020 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437171249|ref|ZP_20700544.1| hypothetical protein SEEEN202_17357 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437175120|ref|ZP_20702621.1| hypothetical protein SEEE3991_05145 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437186986|ref|ZP_20709873.1| hypothetical protein SEEE3618_19439 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437250222|ref|ZP_20715192.1| hypothetical protein SEEE1831_24021 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437260523|ref|ZP_20717644.1| hypothetical protein SEEE2490_09614 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437265660|ref|ZP_20720538.1| hypothetical protein SEEEL909_01638 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437274326|ref|ZP_20725300.1| hypothetical protein SEEEL913_02932 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437286810|ref|ZP_20730312.1| hypothetical protein SEEE4941_05749 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437317129|ref|ZP_20738067.1| hypothetical protein SEEE7015_22515 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437322773|ref|ZP_20738990.1| hypothetical protein SEEE7927_04039 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437335626|ref|ZP_20742790.1| hypothetical protein SEEECHS4_00490 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437349963|ref|ZP_20747288.1| hypothetical protein SEEE2558_00656 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437421200|ref|ZP_20754861.1| hypothetical protein SEEE2217_16349 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437451717|ref|ZP_20759404.1| hypothetical protein SEEE4018_16600 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437459108|ref|ZP_20760960.1| hypothetical protein SEEE6211_01259 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437474016|ref|ZP_20766035.1| hypothetical protein SEEE4441_04178 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437490172|ref|ZP_20770952.1| hypothetical protein SEEE4647_06347 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437517667|ref|ZP_20778261.1| hypothetical protein SEEE9845_21171 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437544434|ref|ZP_20782940.1| hypothetical protein SEEE9317_22071 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437554113|ref|ZP_20784330.1| hypothetical protein SEEE0116_05828 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437576543|ref|ZP_20790712.1| hypothetical protein SEEE1117_15206 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437596735|ref|ZP_20796350.1| hypothetical protein SEEE1392_21530 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437604309|ref|ZP_20798939.1| hypothetical protein SEEE0268_11351 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437615749|ref|ZP_20802327.1| hypothetical protein SEEE0316_05539 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437646908|ref|ZP_20809162.1| hypothetical protein SEEE0436_17659 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437659408|ref|ZP_20812235.1| hypothetical protein SEEE1319_09447 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437674359|ref|ZP_20816512.1| hypothetical protein SEEE4481_08287 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437688421|ref|ZP_20819732.1| hypothetical protein SEEE6297_01202 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437716783|ref|ZP_20828136.1| hypothetical protein SEEE4220_21416 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437728732|ref|ZP_20830612.1| hypothetical protein SEEE1616_10587 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437782290|ref|ZP_20836569.1| hypothetical protein SEEE2651_18268 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437807377|ref|ZP_20839754.1| hypothetical protein SEEE3944_09533 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437940834|ref|ZP_20851610.1| hypothetical protein SEEE5621_23777 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|438085625|ref|ZP_20858733.1| hypothetical protein SEEE2625_05934 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438098856|ref|ZP_20862978.1| hypothetical protein SEEE1976_04497 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438115728|ref|ZP_20870601.1| hypothetical protein SEEE3407_20523 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|438132421|ref|ZP_20873829.1| hypothetical protein SEEP9120_10427 [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|440762702|ref|ZP_20941754.1| hypothetical protein F434_07069 [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440767254|ref|ZP_20946237.1| hypothetical protein F514_06411 [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440772181|ref|ZP_20951088.1| hypothetical protein F515_07323 [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445147717|ref|ZP_21388320.1| hypothetical protein SEEDSL_017310 [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445155648|ref|ZP_21392368.1| hypothetical protein SEEDHWS_021175 [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445170247|ref|ZP_21395646.1| hypothetical protein SEE8A_002288 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445193563|ref|ZP_21400174.1| hypothetical protein SE20037_11288 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445235773|ref|ZP_21406914.1| hypothetical protein SEE10_009020 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445241494|ref|ZP_21407683.1| hypothetical protein SEE436_022084 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445333203|ref|ZP_21414706.1| hypothetical protein SEE18569_022001 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445352663|ref|ZP_21420670.1| hypothetical protein SEE13_010672 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445361492|ref|ZP_21423836.1| hypothetical protein SEE23_002768 [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|16418746|gb|AAL19204.1| putative-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62126443|gb|AAX64146.1| putative-tRNA hydrolase domain [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161361979|gb|ABX65747.1| hypothetical protein SPAB_00306 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405395|gb|ACF65617.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408570|gb|ACF68789.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194458128|gb|EDX46967.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712108|gb|ACF91329.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195632557|gb|EDX51011.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197214928|gb|ACH52325.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197241665|gb|EDY24285.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197292024|gb|EDY31374.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197938029|gb|ACH75362.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199605674|gb|EDZ04219.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205322185|gb|EDZ10024.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205331555|gb|EDZ18319.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334913|gb|EDZ21677.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336203|gb|EDZ22967.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205346929|gb|EDZ33560.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206707561|emb|CAR31835.1| putative release factor [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466614|gb|ACN44444.1| hypothetical protein SPC_0256 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245472|emb|CBG23262.1| putative release factor [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267991931|gb|ACY86816.1| hypothetical protein STM14_0282 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301156867|emb|CBW16343.1| hypothetical release factor [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911210|dbj|BAJ35184.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321225173|gb|EFX50233.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322713264|gb|EFZ04835.1| Class I peptide chain release factor [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323128560|gb|ADX15990.1| Uncharacterized protein yaeJ [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326621944|gb|EGE28289.1| Class I peptide chain release factor [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|332987192|gb|AEF06175.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353579872|gb|EHC41301.1| Putative translation release factor [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353579904|gb|EHC41323.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353585848|gb|EHC45571.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353600022|gb|EHC56051.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353609338|gb|EHC62677.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353619524|gb|EHC69883.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353626059|gb|EHC74692.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353652647|gb|EHC94419.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Senftenberg str. A4-543]
gi|353669612|gb|EHD06465.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353670476|gb|EHD07070.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357204660|gb|AET52706.1| putative release factor [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357960430|gb|EHJ84272.1| Hypothetical protein YaeJ [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|366085478|gb|EHN49361.1| hypothetical protein SEEPO729_14869 [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|380461885|gb|AFD57288.1| putative release factor [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|381291262|gb|EIC32512.1| hypothetical protein SEEH1579_13183 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381292737|gb|EIC33911.1| hypothetical protein SEEH1563_16514 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381296815|gb|EIC37916.1| hypothetical protein SEEH1573_08249 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381311592|gb|EIC52407.1| hypothetical protein SEEH1566_00743 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381313674|gb|EIC54455.1| hypothetical protein SEEH1565_17432 [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383797176|gb|AFH44258.1| YaeJ translation release factor [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|392616877|gb|EIW99306.1| hypothetical protein SEENLE01_13600 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392620309|gb|EIX02678.1| hypothetical protein SEENLE15_10024 [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392731343|gb|EIZ88572.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392736189|gb|EIZ93356.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392736908|gb|EIZ94069.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392743498|gb|EJA00568.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392747394|gb|EJA04392.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392751162|gb|EJA08118.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392766433|gb|EJA23211.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392766451|gb|EJA23228.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392766804|gb|EJA23577.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392771977|gb|EJA28686.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392782408|gb|EJA39045.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392784163|gb|EJA40772.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392789638|gb|EJA46140.1| hypothetical protein SEEN538_11823 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392791741|gb|EJA48210.1| hypothetical protein SEEN425_02526 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392803453|gb|EJA59646.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392803809|gb|EJA59992.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392806643|gb|EJA62741.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392807919|gb|EJA63978.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392809138|gb|EJA65178.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392821679|gb|EJA77502.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392823854|gb|EJA79646.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392831019|gb|EJA86654.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|392835316|gb|EJA90914.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392836774|gb|EJA92351.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|395988420|gb|EJH97577.1| hypothetical protein SEEE0166_11139 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395991063|gb|EJI00189.1| hypothetical protein SEEE0631_03568 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395993656|gb|EJI02750.1| hypothetical protein SEEE3139_01776 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395999704|gb|EJI08721.1| hypothetical protein SEEE4917_14322 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396004924|gb|EJI13905.1| hypothetical protein SEEE0424_05625 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396006996|gb|EJI15955.1| hypothetical protein SEEE3076_00834 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396012938|gb|EJI21828.1| hypothetical protein SEEE6670_14031 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396013106|gb|EJI21994.1| hypothetical protein SEEE6622_12956 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396014819|gb|EJI23703.1| hypothetical protein SEEE6426_08607 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396028240|gb|EJI37001.1| hypothetical protein SEEE7246_09360 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396028621|gb|EJI37381.1| hypothetical protein SEEE6437_11090 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396032857|gb|EJI41573.1| hypothetical protein SEEE7250_02901 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396038163|gb|EJI46803.1| hypothetical protein SEEE1427_15635 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396038581|gb|EJI47216.1| hypothetical protein SEEE1757_16454 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396043150|gb|EJI51764.1| hypothetical protein SEEE2659_10726 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396052542|gb|EJI61049.1| hypothetical protein SEEE8B1_15188 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396055327|gb|EJI63818.1| hypothetical protein SEEE5101_10477 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396061489|gb|EJI69911.1| hypothetical protein SEEE5518_01332 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396068944|gb|EJI77288.1| hypothetical protein SEEE1618_09438 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396071081|gb|EJI79407.1| hypothetical protein SEEE6482_09919 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396071767|gb|EJI80090.1| hypothetical protein SEEE3079_03261 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|402520837|gb|EJW28177.1| hypothetical protein CFSAN00322_14531 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402520855|gb|EJW28194.1| hypothetical protein CFSAN00325_12713 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402524440|gb|EJW31738.1| hypothetical protein CFSAN00326_02753 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402531516|gb|EJW38721.1| hypothetical protein CFSAN00328_06530 [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414024095|gb|EKT07493.1| hypothetical protein B571_01240 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414024431|gb|EKT07810.1| hypothetical protein B576_01320 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414025990|gb|EKT09276.1| hypothetical protein B572_01310 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414038230|gb|EKT20951.1| hypothetical protein B577_00980 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414039014|gb|EKT21711.1| hypothetical protein B573_00985 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414043317|gb|EKT25826.1| hypothetical protein B574_00990 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414052487|gb|EKT34524.1| hypothetical protein B578_00970 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414053893|gb|EKT35861.1| hypothetical protein B575_01365 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414058172|gb|EKT39867.1| hypothetical protein B579_01835 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414062184|gb|EKT43525.1| hypothetical protein B580_01270 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414067651|gb|EKT47962.1| hypothetical protein B581_01555 [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|434941246|gb|ELL47720.1| hypothetical protein SEEP9120_10427 [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434961950|gb|ELL55190.1| hypothetical protein SEECHS44_05080 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434969270|gb|ELL61984.1| hypothetical protein SEEE1882_03703 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434972514|gb|ELL64968.1| hypothetical protein SEE22704_07973 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434975932|gb|ELL68206.1| hypothetical protein SEEE1884_02963 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434982737|gb|ELL74547.1| hypothetical protein SEEE1594_03119 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434985078|gb|ELL76778.1| hypothetical protein SEEE1566_15239 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434992443|gb|ELL83900.1| hypothetical protein SEEE1580_03338 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434994509|gb|ELL85859.1| hypothetical protein SEEE1543_16829 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435001633|gb|ELL92725.1| hypothetical protein SEEE1441_07016 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435009180|gb|ELL99976.1| hypothetical protein SEEE1810_03651 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435010390|gb|ELM01155.1| hypothetical protein SEEE1558_07934 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435017425|gb|ELM07932.1| hypothetical protein SEEE1018_08817 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435020051|gb|ELM10479.1| hypothetical protein SEEE1010_10115 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435029992|gb|ELM20041.1| hypothetical protein SEEE1729_02373 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435030745|gb|ELM20748.1| hypothetical protein SEE30663_00557 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|435032725|gb|ELM22656.1| hypothetical protein SEEE0895_02628 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435040962|gb|ELM30714.1| hypothetical protein SEEE0899_03112 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435042238|gb|ELM31958.1| hypothetical protein SEEE1457_02728 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435046141|gb|ELM35758.1| hypothetical protein SEEE1747_02963 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435049314|gb|ELM38841.1| hypothetical protein SEEE0968_15650 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435055706|gb|ELM45117.1| hypothetical protein SEEE1444_03925 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435055904|gb|ELM45314.1| hypothetical protein SEEE1445_16155 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435069595|gb|ELM58595.1| hypothetical protein SEEE1559_05511 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435072407|gb|ELM61331.1| hypothetical protein SEEE1565_00517 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435072997|gb|ELM61886.1| hypothetical protein SEEE1808_04693 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435073363|gb|ELM62236.1| hypothetical protein SEEE0956_22019 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435075509|gb|ELM64324.1| hypothetical protein SEEE1811_19305 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435087592|gb|ELM76079.1| hypothetical protein SEEE1455_01272 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435091884|gb|ELM80257.1| hypothetical protein SEEE1725_15587 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435098390|gb|ELM86631.1| hypothetical protein SEEE1575_04682 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435100989|gb|ELM89144.1| hypothetical protein SEEE1745_04670 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435109179|gb|ELM97134.1| hypothetical protein SEEE1791_04119 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435111480|gb|ELM99384.1| hypothetical protein SEEE6709_15208 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435112074|gb|ELM99950.1| hypothetical protein SEEE1795_03486 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435116765|gb|ELN04493.1| hypothetical protein SEEE9058_15646 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435125494|gb|ELN12935.1| hypothetical protein SEEE0819_09690 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435126350|gb|ELN13745.1| hypothetical protein SEEE0816_06881 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435132863|gb|ELN20046.1| hypothetical protein SEEE3072_09247 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435141640|gb|ELN28581.1| hypothetical protein SEEE3089_02528 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435141998|gb|ELN28928.1| hypothetical protein SEEE9163_10532 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435146893|gb|ELN33675.1| hypothetical protein SEEEN202_17357 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435149616|gb|ELN36311.1| hypothetical protein SEEE151_07020 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435157360|gb|ELN43821.1| hypothetical protein SEEE3991_05145 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435157861|gb|ELN44295.1| hypothetical protein SEEE3618_19439 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435163927|gb|ELN50040.1| hypothetical protein SEEE2490_09614 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435165330|gb|ELN51382.1| hypothetical protein SEEE1831_24021 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435176331|gb|ELN61720.1| hypothetical protein SEEEL913_02932 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435177429|gb|ELN62754.1| hypothetical protein SEEEL909_01638 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435179585|gb|ELN64733.1| hypothetical protein SEEE7015_22515 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435184109|gb|ELN69054.1| hypothetical protein SEEE4941_05749 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435195520|gb|ELN79912.1| hypothetical protein SEEE7927_04039 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435197995|gb|ELN82233.1| hypothetical protein SEEECHS4_00490 [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435200856|gb|ELN84822.1| hypothetical protein SEEE2217_16349 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435208558|gb|ELN91964.1| hypothetical protein SEEE4018_16600 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435214489|gb|ELN97272.1| hypothetical protein SEEE2558_00656 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435222357|gb|ELO04465.1| hypothetical protein SEEE6211_01259 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435224503|gb|ELO06464.1| hypothetical protein SEEE4441_04178 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435228148|gb|ELO09593.1| hypothetical protein SEEE9845_21171 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435231006|gb|ELO12271.1| hypothetical protein SEEE4647_06347 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435234246|gb|ELO15125.1| hypothetical protein SEEE9317_22071 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435243891|gb|ELO24147.1| hypothetical protein SEEE1117_15206 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435244294|gb|ELO24525.1| hypothetical protein SEEE0116_05828 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435249298|gb|ELO29123.1| hypothetical protein SEEE1392_21530 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435257807|gb|ELO37087.1| hypothetical protein SEEE0268_11351 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435262125|gb|ELO41254.1| hypothetical protein SEEE0316_05539 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435269948|gb|ELO48458.1| hypothetical protein SEEE1319_09447 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435271219|gb|ELO49687.1| hypothetical protein SEEE0436_17659 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435278743|gb|ELO56573.1| hypothetical protein SEEE4481_08287 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435282721|gb|ELO60331.1| hypothetical protein SEEE6297_01202 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435284571|gb|ELO62019.1| hypothetical protein SEEE4220_21416 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435290421|gb|ELO67349.1| hypothetical protein SEEE1616_10587 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435299751|gb|ELO75875.1| hypothetical protein SEEE2651_18268 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435300886|gb|ELO76944.1| hypothetical protein SEEE3944_09533 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435309223|gb|ELO83994.1| hypothetical protein SEEE5621_23777 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|435318829|gb|ELO91717.1| hypothetical protein SEEE2625_05934 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435326011|gb|ELO97845.1| hypothetical protein SEEE1976_04497 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435328173|gb|ELO99773.1| hypothetical protein SEEE3407_20523 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|436419398|gb|ELP17274.1| hypothetical protein F515_07323 [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436420906|gb|ELP18760.1| hypothetical protein F514_06411 [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436422425|gb|ELP20262.1| hypothetical protein F434_07069 [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|444843974|gb|ELX69220.1| hypothetical protein SEEDSL_017310 [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444848516|gb|ELX73639.1| hypothetical protein SEEDHWS_021175 [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444859703|gb|ELX84643.1| hypothetical protein SEE10_009020 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444862638|gb|ELX87485.1| hypothetical protein SEE8A_002288 [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444866355|gb|ELX91086.1| hypothetical protein SE20037_11288 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444873472|gb|ELX97765.1| hypothetical protein SEE13_010672 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444876232|gb|ELY00414.1| hypothetical protein SEE18569_022001 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444884675|gb|ELY08496.1| hypothetical protein SEE23_002768 [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|444890976|gb|ELY14264.1| hypothetical protein SEE436_022084 [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 140
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I + EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ +
Sbjct: 2 IAISRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIR-ASGLPEYYKQRLLTAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG +IIK+ RSQ+LN A+ L
Sbjct: 61 HHLISDDGVIIIKAQEFRSQELNREAAIARL 91
>gi|304396667|ref|ZP_07378548.1| Class I peptide chain release factor [Pantoea sp. aB]
gi|440759535|ref|ZP_20938669.1| putative translation release factor YaeJ [Pantoea agglomerans 299R]
gi|304356176|gb|EFM20542.1| Class I peptide chain release factor [Pantoea sp. aB]
gi|436426717|gb|ELP24420.1| putative translation release factor YaeJ [Pantoea agglomerans 299R]
Length = 136
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + AA+ L K++L+ + + + DG ++I
Sbjct: 14 EIELTAIRAQGAGGQHVNKASTAIHLRFDI-AASSLPAFYKERLLTASHHLITGDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWK 170
K+ RSQ++N A+ L N+I +
Sbjct: 73 KAQEYRSQEMNREAALQRLVNLIQE 97
>gi|307544030|ref|YP_003896509.1| hypothetical protein HELO_1441 [Halomonas elongata DSM 2581]
gi|307216054|emb|CBV41324.1| hypothetical protein HELO_1441 [Halomonas elongata DSM 2581]
Length = 137
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E++IT R+ G GGQ+VN V++ V +RF + ++ L K++L+ L+ R++K+G +I
Sbjct: 13 QEIEITQIRAQGAGGQNVNKVASAVHLRFDIPGSS-LPPFYKERLMALSDRRISKEGVII 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ R+ +LN DA+ LR +I A +
Sbjct: 72 IKAQNHRTLELNKEDALGRLRELIQGAVQ 100
>gi|93005695|ref|YP_580132.1| class I peptide chain release factor [Psychrobacter cryohalolentis
K5]
gi|92393373|gb|ABE74648.1| Class I peptide chain release factor [Psychrobacter cryohalolentis
K5]
Length = 137
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQ-LIELNKNRLNKDGYLI 144
+++I+ R+ G GGQ+VN VS+ + +RF ++A++ DV KQ L++ +R++K+G LI
Sbjct: 14 DVEISAIRAQGAGGQNVNKVSSAIHLRFDIHASSL--SDVNKQRLLDSKDSRISKEGVLI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
IK+ + R+Q+ N DA L++ I KA
Sbjct: 72 IKAQQFRTQERNKIDAFERLQSFINKA 98
>gi|375262704|ref|YP_005024934.1| peptidyl-tRNA hydrolase domain protein [Vibrio sp. EJY3]
gi|369843132|gb|AEX23960.1| peptidyl-tRNA hydrolase domain protein [Vibrio sp. EJY3]
Length = 137
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ ++ R+ G GGQ+VN V+T + +RF + + L E K++L+ L+ +R+ KDG +II
Sbjct: 14 EIQLSPIRAQGNGGQNVNKVATAIHLRFDIRHST-LPEFYKERLLALSDSRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N DA+ L+ +I AA
Sbjct: 73 KAQQFRTQEQNKEDALNRLQELIESAA 99
>gi|161504640|ref|YP_001571752.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160865987|gb|ABX22610.1| hypothetical protein SARI_02761 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 140
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ + + ++ DG +II
Sbjct: 14 ELEITAIRAQGAGGQHVNKTSSAIHLRFDI-LASGLPEYYKQRLLTASHHLISHDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ+LN A+ L +I
Sbjct: 73 KAQEYRSQELNREAAIARLVAVI 95
>gi|427417287|ref|ZP_18907470.1| protein chain release factor B [Leptolyngbya sp. PCC 7375]
gi|425760000|gb|EKV00853.1| protein chain release factor B [Leptolyngbya sp. PCC 7375]
Length = 139
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+D+ RS G GGQ+VN V+T + +RF + A+ L E K +L+ LN +R+ K G + I
Sbjct: 14 EIDLQAVRSQGAGGQNVNKVATAIHLRFNI-LASSLPERYKTRLLTLNDSRITKGGVIHI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
KS R+Q N DA+ L+ +I A
Sbjct: 73 KSQAYRTQLRNKTDALERLQQLIRAA 98
>gi|350545329|ref|ZP_08914819.1| Hypothetical protein YaeJ with similarity to translation release
factor [Candidatus Burkholderia kirkii UZHbot1]
gi|350526877|emb|CCD39310.1| Hypothetical protein YaeJ with similarity to translation release
factor [Candidatus Burkholderia kirkii UZHbot1]
Length = 123
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSD 148
+T R+ G GGQ+VN VS+ + +RF + A++ L E +K +L+ L +R+ ++G ++IK+
Sbjct: 2 LTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPEHIKTRLLALADSRVTREGVIVIKAQ 60
Query: 149 RTRSQQLNLADAMTTLRNMI 168
R+Q +N A A+T L +I
Sbjct: 61 EHRTQDMNRAMALTRLDELI 80
>gi|383318280|ref|YP_005379122.1| protein chain release factor B [Frateuria aurantia DSM 6220]
gi|379045384|gb|AFC87440.1| protein chain release factor B [Frateuria aurantia DSM 6220]
Length = 140
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R +I E EL + R+ GPGGQHVN + V++RF V + L E ++ +++E
Sbjct: 2 LTISRSIHIPESELVERFLRADGPGGQHVNRTESAVELRFDVINSPSLPEALRTRVLERA 61
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
RL +G L+I++ R R Q N DA L +I + +P
Sbjct: 62 DRRLTGEGVLVIQARRFRDQARNREDARDRLVEIIREVLQP 102
>gi|339505671|ref|YP_004693091.1| peptide chain release factor [Roseobacter litoralis Och 149]
gi|338759664|gb|AEI96128.1| putative peptide chain release factor [Roseobacter litoralis Och
149]
Length = 139
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ RSSGPGGQ+VN VS+ V++RF+ + L VK +L L R DG L++
Sbjct: 13 ELTESFMRSSGPGGQNVNKVSSAVELRFEAARSPNLPAPVKTRLKRLAGRRWTTDGALVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+ + TRSQ N L +I KA
Sbjct: 73 QCEETRSQARNREIVRERLSELIQKA 98
>gi|148975467|ref|ZP_01812338.1| hypothetical protein VSWAT3_02866 [Vibrionales bacterium SWAT-3]
gi|145964895|gb|EDK30146.1| hypothetical protein VSWAT3_02866 [Vibrionales bacterium SWAT-3]
Length = 136
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ +T R+ G GGQ+VN VS+ + +RF + L + K++L+ +R+ KDG +II
Sbjct: 14 EIQLTAIRAQGAGGQNVNKVSSAIHLRFDTKHST-LPDFYKEKLLAFKDSRITKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I +A K
Sbjct: 73 KAQQYRTQEQNREDALIRLKELILEATK 100
>gi|377578744|ref|ZP_09807720.1| hypothetical protein YaeJ [Escherichia hermannii NBRC 105704]
gi|377540057|dbj|GAB52885.1| hypothetical protein YaeJ [Escherichia hermannii NBRC 105704]
Length = 140
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+ +T R+ G GGQHVN ST + +RF + AA+ L E VK +L+ + + + +G ++
Sbjct: 13 DEVTLTAIRAQGAGGQHVNKTSTAIHLRFDI-AASSLPESVKARLLTASHHLITAEGSVV 71
Query: 145 IKSDRTRSQQLNLADAMT 162
IK+ RSQ++N A++
Sbjct: 72 IKAQEYRSQEMNREAALS 89
>gi|406923379|gb|EKD60525.1| class I peptide chain release factor [uncultured bacterium]
Length = 140
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VST V++RF+ + L VK +L +L R +G +++
Sbjct: 14 ELSESFMRASGPGGQNVNKVSTAVELRFEAERSPHLTSGVKARLKKLAGRRWTLEGAIVL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+ + TRSQ N A L ++I +AA AP+
Sbjct: 74 QVEDTRSQLRNRELARERLADLI-RAAVVAPK 104
>gi|152985090|ref|YP_001349993.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
aeruginosa PA7]
gi|452876635|ref|ZP_21953980.1| hypothetical protein G039_04740 [Pseudomonas aeruginosa VRFPA01]
gi|150960248|gb|ABR82273.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452186564|gb|EME13582.1| hypothetical protein G039_04740 [Pseudomonas aeruginosa VRFPA01]
Length = 137
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+++ R+ G GGQ+VN VS+ V +RF + A++ L K++L+ L+ R++ DG ++
Sbjct: 13 HEIELNAIRAQGAGGQNVNKVSSAVHLRFDIQASS-LPPFYKERLLALSDQRISGDGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IK+ + R+Q+ N DA+ L +I AK
Sbjct: 72 IKAQQYRTQEQNREDALARLAELIRSVAK 100
>gi|259417132|ref|ZP_05741051.1| peptidyl-tRNA hydrolase domain protein [Silicibacter sp. TrichCH4B]
gi|259346038|gb|EEW57852.1| peptidyl-tRNA hydrolase domain protein [Silicibacter sp. TrichCH4B]
Length = 161
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L VK +L + R DG LI+
Sbjct: 36 ELTESFMRASGPGGQNVNKVSSAVELRFEAERSPHLPGPVKTRLRRIAGRRWTNDGALIL 95
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+ D TRSQ N L +I +A KP +I+
Sbjct: 96 QCDETRSQARNREIIRERLAELIRRALIKPKRRIA 130
>gi|404401874|ref|ZP_10993458.1| hypothetical protein PfusU_18986 [Pseudomonas fuscovaginae UPB0736]
Length = 137
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ T R+ G GGQ+VN VS+ V +RF V A++ L K++L+ L+ +R+ DG ++I
Sbjct: 14 EIEWTAIRAQGAGGQNVNKVSSAVHLRFDVPASS-LPPFYKERLLALSDSRITSDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N ADA+ L +I A +
Sbjct: 73 KAQQYRTQEQNRADALLRLVELIQAATR 100
>gi|372276098|ref|ZP_09512134.1| hypothetical protein PSL1_13439 [Pantoea sp. SL1_M5]
gi|390436926|ref|ZP_10225464.1| hypothetical protein PaggI_18993 [Pantoea agglomerans IG1]
Length = 136
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + AA+ L K++L+ + + DG ++I
Sbjct: 14 EIELTAIRAQGAGGQHVNKASTAIHLRFDI-AASSLPAFYKERLLTATHHLITGDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWK 170
K+ RSQ++N A+ L N+I +
Sbjct: 73 KAQEYRSQEMNREAALQRLVNLIQE 97
>gi|242041563|ref|XP_002468176.1| hypothetical protein SORBIDRAFT_01g041065 [Sorghum bicolor]
gi|241922030|gb|EER95174.1| hypothetical protein SORBIDRAFT_01g041065 [Sorghum bicolor]
Length = 108
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 51/76 (67%)
Query: 111 IRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWK 170
+RF V A+WL E +K+++++ KNR+NKDG L+I S +TR+Q+ N+ DA+ ++ +I
Sbjct: 1 MRFNVKEAHWLGERIKERILQAEKNRINKDGELVISSTKTRTQKGNIEDALQKIQAIIDA 60
Query: 171 AAKPAPQISEDTIDRI 186
A+ P +ED +I
Sbjct: 61 ASYVPPPPTEDQKKKI 76
>gi|122879011|ref|YP_198985.6| peptidyl-tRNA hydrolase domain-containing protein [Xanthomonas
oryzae pv. oryzae KACC 10331]
gi|188579051|ref|YP_001915980.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|384417390|ref|YP_005626750.1| peptidyl-tRNA hydrolase domain-containing protein [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|188523503|gb|ACD61448.1| peptidyl-tRNA hydrolase domain, putative [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|353460304|gb|AEQ94583.1| peptidyl-tRNA hydrolase domain protein [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 143
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ +G L+I + R R+Q N DA L +I
Sbjct: 68 RMTAEGVLVIDAQRFRTQDRNRDDARERLAEII 100
>gi|619672|gb|AAA86092.1| ORF140, partial [Escherichia coli]
Length = 124
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSD 148
IT R+ G GGQHVN ST + +RF + A++ L E K++L+ + + ++ DG ++IK+
Sbjct: 1 ITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAASHHLISSDGVIVIKAQ 59
Query: 149 RTRSQQLNLADAMTTLRNMI 168
RSQ+LN A+ L MI
Sbjct: 60 EYRSQELNREAALARLVAMI 79
>gi|153207847|ref|ZP_01946424.1| peptidyl-tRNA hydrolase domain protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212219146|ref|YP_002305933.1| peptidyl-tRNA hydrolase domain protein [Coxiella burnetii
CbuK_Q154]
gi|120576273|gb|EAX32897.1| peptidyl-tRNA hydrolase domain protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212013408|gb|ACJ20788.1| peptidyl-tRNA hydrolase family protein [Coxiella burnetii
CbuK_Q154]
Length = 131
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+SG GGQ VN ++T +RF V ++ L E++K++L+ + NR+N +G L+I
Sbjct: 8 EVEWRFIRASGSGGQKVNKIATAAQLRFNVPKSS-LPEEIKERLVAIAGNRINTEGELVI 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
R R+Q+ N DA+ L + + AA+
Sbjct: 67 TGRRYRTQKQNRQDALERLIHFVELAAQ 94
>gi|320540051|ref|ZP_08039707.1| putative conserved protein [Serratia symbiotica str. Tucson]
gi|320029900|gb|EFW11923.1| putative conserved protein [Serratia symbiotica str. Tucson]
Length = 137
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL++T R+ G GGQHVN ST + +RF + A+ L E K++L+ N + ++ G +II
Sbjct: 14 ELELTAIRAQGAGGQHVNKTSTAIHLRFDI-CASSLPEYYKEKLLAFNHHLISAAGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+LN A+ L +I +A
Sbjct: 73 KAQEYRSQELNRDAALARLAAVIQQA 98
>gi|440289009|ref|YP_007341774.1| protein chain release factor B [Enterobacteriaceae bacterium strain
FGI 57]
gi|440048531|gb|AGB79589.1| protein chain release factor B [Enterobacteriaceae bacterium strain
FGI 57]
Length = 137
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+ IT R+ G GGQHVN ST + +RF + A++ L + K++L+ + + ++ DG I
Sbjct: 13 EEITITAIRAQGAGGQHVNKASTAIHLRFDIRASS-LPDYYKEKLLAASHHLISADGVFI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMI 168
IK+ RSQ++N A+ L +I
Sbjct: 72 IKAQEYRSQEMNREAAIARLVAVI 95
>gi|254785908|ref|YP_003073337.1| peptidyl-tRNA hydrolase domain-containing protein [Teredinibacter
turnerae T7901]
gi|237686949|gb|ACR14213.1| peptidyl-tRNA hydrolase domain protein [Teredinibacter turnerae
T7901]
Length = 135
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 88 DITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
DI +S R+ G GGQ+VN VS+ V +RF V+A + L VK++L + R+N +G L+I
Sbjct: 12 DIRFSAMRAQGAGGQNVNKVSSAVLLRFDVHA-SVLPPAVKQRLFQKESGRINSEGVLLI 70
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K+ + R+Q+ N ADA+ L ++ A
Sbjct: 71 KAQQYRTQERNKADALERLAEILAGCA 97
>gi|443313193|ref|ZP_21042805.1| protein chain release factor B [Synechocystis sp. PCC 7509]
gi|442776598|gb|ELR86879.1| protein chain release factor B [Synechocystis sp. PCC 7509]
Length = 137
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + RS G GGQ+VN V+T + +RF + ++ N K +L++L+ R+ K+G L+I
Sbjct: 14 EIEFSAIRSQGAGGQNVNKVATAIHLRFDIVTSSLPNY-YKDKLLQLSDRRITKEGVLVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ RSQ+ N +A+ L++++ A
Sbjct: 73 KAQEHRSQEQNREEALKRLKDLVKSA 98
>gi|440750513|ref|ZP_20929755.1| putative protein YaeJ [Mariniradius saccharolyticus AK6]
gi|436480950|gb|ELP37155.1| putative protein YaeJ [Mariniradius saccharolyticus AK6]
Length = 138
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E + SRSSGPGGQ+VN V++KV + F V + L+E+ K +L+ N+L+ +G + I
Sbjct: 15 EFEFQMSRSSGPGGQNVNKVNSKVALVFNVRGSVVLSEEEKSELLVKLANKLDSEGNIQI 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+S RSQ N A+ MI KA
Sbjct: 75 QSQEKRSQLQNKEIAIAKFYEMISKA 100
>gi|78186134|ref|YP_374177.1| release factors family protein [Chlorobium luteolum DSM 273]
gi|78166036|gb|ABB23134.1| release factors family protein [Chlorobium luteolum DSM 273]
Length = 134
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++ + RS G GGQ+VN V T V + F + AA+ L E VK++L+ R+++DG L+
Sbjct: 9 DEVELRFMRSGGAGGQNVNKVETAVHLSFDI-AASSLPEAVKERLLLRRDRRISRDGVLV 67
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPA 175
IK+ R RSQ+ N DA+ L+ ++ A+ +PA
Sbjct: 68 IKAQRFRSQEKNREDALLRLQAVVDGASEEPA 99
>gi|291453215|ref|ZP_06592605.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291356164|gb|EFE83066.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 155
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +SRSSGPGGQHVN+ ++V++RF + A L E K++ +E RL G L +
Sbjct: 30 ELTWRFSRSSGPGGQHVNTSDSQVELRFDLAATQALPEVWKERALERLAGRLT-GGVLAV 88
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
++ RSQ N A+ + +++ +A P P+
Sbjct: 89 RASDHRSQWRNRETALDRMVSLLGEATAPPPR 120
>gi|421884708|ref|ZP_16315915.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|379985659|emb|CCF88188.1| peptidyl-tRNA hydrolase domain protein [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
Length = 140
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I + EL+IT R+ G GGQHVN S+ + +RF + A+ L E K++L+ +
Sbjct: 2 IAISRTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIR-ASGLPEYYKQRLLTAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG +IIK+ RSQ+LN A+ L
Sbjct: 61 HHLISDDGVIIIKAQEFRSQELNRDAAIARL 91
>gi|94500790|ref|ZP_01307319.1| hypothetical protein RED65_03605 [Bermanella marisrubri]
gi|94427112|gb|EAT12093.1| hypothetical protein RED65_03605 [Oceanobacter sp. RED65]
Length = 137
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++ R+ G GGQ+VN ST + +RF + A++ L + K +L+ ++ +R+ KDG ++
Sbjct: 13 DEIEMHAMRAQGSGGQNVNKNSTAIHLRFDIKASS-LPDLYKDKLLAMSDHRITKDGEIV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
IKS +SQ+LN A+ L MI +A K
Sbjct: 72 IKSQEHKSQELNKEAALARLAAMIKEANK 100
>gi|359395856|ref|ZP_09188908.1| hypothetical protein KUC_2525 [Halomonas boliviensis LC1]
gi|357970121|gb|EHJ92568.1| hypothetical protein KUC_2525 [Halomonas boliviensis LC1]
Length = 138
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+DI+ R+ G GGQ+VN VS+ V +RF + ++ L K++L+ L+ R++K+G +II
Sbjct: 14 EIDISQIRAQGAGGQNVNKVSSAVHLRFDILSST-LPPLYKERLMTLSDQRISKEGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R +LN DA+ L+ +I A K
Sbjct: 73 KAQSHRKLELNKEDALARLKELIQSATK 100
>gi|359150131|ref|ZP_09182992.1| hypothetical protein StrS4_26101 [Streptomyces sp. S4]
gi|421742627|ref|ZP_16180744.1| protein chain release factor B [Streptomyces sp. SM8]
gi|406688961|gb|EKC92865.1| protein chain release factor B [Streptomyces sp. SM8]
Length = 158
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +SRSSGPGGQHVN+ ++V++RF + A L E K++ +E RL G L +
Sbjct: 33 ELTWRFSRSSGPGGQHVNTSDSQVELRFDLAATQALPEVWKERALERLAGRLT-GGVLAV 91
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
++ RSQ N A+ + +++ +A P P+
Sbjct: 92 RASDHRSQWRNRETALDRMVSLLGEATAPPPR 123
>gi|404451165|ref|ZP_11016137.1| protein chain release factor B [Indibacter alkaliphilus LW1]
gi|403763210|gb|EJZ24189.1| protein chain release factor B [Indibacter alkaliphilus LW1]
Length = 138
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL+ SRSSGPGGQ+VN V++K+ ++F V + LNE K+ + + ++N DG L+I
Sbjct: 15 ELEFQASRSSGPGGQNVNKVNSKITLKFSVVNSRVLNEQEKEMIFKKLDKKINADGELLI 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+ + RSQ N A+ +++ KA
Sbjct: 75 QVEEKRSQYQNKEIAVRKFYDLLRKA 100
>gi|297539476|ref|YP_003675245.1| Class I peptide chain release factor [Methylotenera versatilis 301]
gi|297258823|gb|ADI30668.1| Class I peptide chain release factor [Methylotenera versatilis 301]
Length = 136
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
++IP Y +++ R+ G GGQ+VN VS+ + +RF + A+ L++ +K++L+ L
Sbjct: 2 ILIPETEY-----ELSAIRAQGAGGQNVNKVSSAIHLRFDIQAST-LSDWLKERLMHLKD 55
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
NR+ +G L++K+ + R+Q+ N DA L ++ A + P
Sbjct: 56 NRITAEGILVLKAQQYRTQEANKKDATVRLHEIVNAANQVKP 97
>gi|410636902|ref|ZP_11347493.1| ribosome-associated protein [Glaciecola lipolytica E3]
gi|410143708|dbj|GAC14698.1| ribosome-associated protein [Glaciecola lipolytica E3]
Length = 140
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 77 IPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
I + I+E + ++ R+ G GGQ+VN VS+ + +RF + A+ L E K L+ N +
Sbjct: 6 ITEYISISEDQFEMNAIRAQGAGGQNVNKVSSAIHLRFDIQAST-LPEFYKTNLLNSNDS 64
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
R+ +G LIIK+ R+Q+ N DA+ L +I KA KP P+
Sbjct: 65 RITNEGVLIIKAQNYRTQEQNREDALARLVEIIKKAGEKPKPR 107
>gi|387815218|ref|YP_005430707.1| hypothetical protein MARHY2820 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381340237|emb|CCG96284.1| conserved hypothetical protein [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 137
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ IT RS G GGQ+VN V++ V +RF V + L K++L+ L+ R++KDG ++I
Sbjct: 14 EIQITQIRSQGAGGQNVNKVASAVHLRFDVLHST-LPPFYKERLMALSDQRISKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K R+ + N DA+ L+ +I +A KP
Sbjct: 73 KGQSFRTFEQNKEDALNRLKTLIQEAIKP 101
>gi|120555829|ref|YP_960180.1| class I peptide chain release factor [Marinobacter aquaeolei VT8]
gi|120325678|gb|ABM19993.1| Class I peptide chain release factor [Marinobacter aquaeolei VT8]
Length = 137
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ IT RS G GGQ+VN V++ V +RF + + L K++L+ L+ R++KDG ++I
Sbjct: 14 EIQITQIRSQGAGGQNVNKVASAVHLRFDILHST-LPPFYKERLMALSDQRISKDGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K R+ + N DA+ L+ +I +A KP
Sbjct: 73 KGQSFRTFEQNKEDALNRLKTLIQEAVKP 101
>gi|330816109|ref|YP_004359814.1| class I peptide chain release factor [Burkholderia gladioli BSR3]
gi|327368502|gb|AEA59858.1| Class I peptide chain release factor [Burkholderia gladioli BSR3]
Length = 133
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++++ R+ G GGQ+VN VS+ + +RF + A++ L E +K++L+ L+ R+
Sbjct: 3 RYTLDPAEVELSAMRAQGAGGQNVNKVSSAIHLRFDIRASS-LPELLKERLLALSDQRIT 61
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+DG +++KS R+Q+ N A+ L +I
Sbjct: 62 RDGVVVLKSQEYRTQEQNRVAALARLDALI 91
>gi|114766729|ref|ZP_01445667.1| hypothetical protein 1100011001326_R2601_12116 [Pelagibaca
bermudensis HTCC2601]
gi|114541048|gb|EAU44104.1| hypothetical protein R2601_12116 [Roseovarius sp. HTCC2601]
Length = 140
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R S E+ + R+SGPGGQ+VN VS+ V++RF+ + L VK +L +L R
Sbjct: 7 RISIEDWEMTEQFIRASGPGGQNVNKVSSAVELRFEAERSPNLPPAVKTRLRKLAGRRWT 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQI 178
K+G ++++ D TRSQ N A L +I KA KP +I
Sbjct: 67 KEGAVVLQVDETRSQARNREIARERLAELIRKALEKPKRRI 107
>gi|188533060|ref|YP_001906857.1| peptidyl-tRNA hydrolase domain-containing protein [Erwinia
tasmaniensis Et1/99]
gi|188028102|emb|CAO95959.1| Conserved hypothetical protein YaeJ [Erwinia tasmaniensis Et1/99]
Length = 138
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+V+PR I + +++++ R+ G GGQHVN ST + +RF + A++ L E +++++ ++
Sbjct: 2 IVLPRGIVIPDADIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASS-LPEFYQQRMLAVS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWK 170
+ + +G +IIK+ RSQ++N A+ L N+I +
Sbjct: 61 HHLITPEGMVIIKAQEYRSQEMNREAALKRLENLILE 97
>gi|126724591|ref|ZP_01740434.1| hypothetical protein RB2150_12186 [Rhodobacterales bacterium
HTCC2150]
gi|126705755|gb|EBA04845.1| hypothetical protein RB2150_12186 [Rhodobacteraceae bacterium
HTCC2150]
Length = 140
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++RSSGPGGQ+VN VS+ V++RF+ + L VK +L L R KDG +II
Sbjct: 14 ELSENFTRSSGPGGQNVNKVSSAVELRFEAARSPNLTAYVKNRLKTLAGQRWTKDGAVII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+ + TR Q N A L +I KA +P +I+
Sbjct: 74 RVEDTRMQSRNRDIARERLVELIRKATVRPKRRIA 108
>gi|99082506|ref|YP_614660.1| peptidyl-tRNA hydrolase domain-containing protein [Ruegeria sp.
TM1040]
gi|99038786|gb|ABF65398.1| Class I peptide chain release factor [Ruegeria sp. TM1040]
Length = 139
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L VK +L + R DG LI+
Sbjct: 14 ELTESFMRASGPGGQNVNKVSSAVELRFEAERSPHLPGPVKTRLRRIAGRRWTNDGALIL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQIS 179
+ D TRSQ N L +I +A KP +I+
Sbjct: 74 QCDETRSQARNREIIRERLAELIRRALIKPKRRIA 108
>gi|56412513|ref|YP_149588.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197361448|ref|YP_002141084.1| peptidyl-tRNA hydrolase domain-containing protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|56126770|gb|AAV76276.1| putative release factor [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197092924|emb|CAR58353.1| putative release factor [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 140
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I + EL+IT R+ G GGQHVN S + +RF + A+ L E K++L+ +
Sbjct: 2 IAISRTVSIADNELEITAIRAQGAGGQHVNKTSGAIHLRFDIRASG-LPEYYKQRLLTAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG +IIK+ RSQ+LN A+ L +I
Sbjct: 61 HHLISDDGVIIIKAQEFRSQELNREAAIARLVAVI 95
>gi|427428841|ref|ZP_18918879.1| putative protein YaeJ [Caenispirillum salinarum AK4]
gi|425881268|gb|EKV29957.1| putative protein YaeJ [Caenispirillum salinarum AK4]
Length = 139
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+EL+ + R+SGPGGQ+VN VST V +R+ ++ L V +L+ L +R ++G +I
Sbjct: 13 DELEENFVRASGPGGQNVNKVSTAVQLRWDAVHSSALPPGVLDRLLRLAGHRATQEGVII 72
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
I + RSQ+ N ADA L ++ A
Sbjct: 73 IDARAHRSQERNRADARERLAGLVRDA 99
>gi|110677765|ref|YP_680772.1| peptidyl-tRNA hydrolase domain-containing protein [Roseobacter
denitrificans OCh 114]
gi|109453881|gb|ABG30086.1| peptidyl-tRNA hydrolase, putative [Roseobacter denitrificans OCh
114]
Length = 138
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ RSSGPGGQ+VN VS+ V++RF+ + L VK +L L R DG L++
Sbjct: 13 ELTESFMRSSGPGGQNVNKVSSAVELRFEAARSPNLPAPVKTRLKRLAGRRWTTDGALVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+ + TRSQ N L +I KA
Sbjct: 73 QCEETRSQARNREIIRERLAELIRKA 98
>gi|417516057|ref|ZP_12179028.1| Putative translation release factor [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353655131|gb|EHC96232.1| Putative translation release factor [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 140
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+ I R I + EL++T R+ G GGQHVN S+ + +RF + A+ L E K++L+ +
Sbjct: 2 IAISRTVSIADNELELTAIRAQGAGGQHVNKTSSAIHLRFDIR-ASGLPEYYKQRLLTAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG +IIK+ RSQ+LN A+ L
Sbjct: 61 HHLISDDGVIIIKAQEFRSQELNREAAIARL 91
>gi|149370910|ref|ZP_01890505.1| hypothetical protein SCB49_04475 [unidentified eubacterium SCB49]
gi|149355696|gb|EDM44254.1| hypothetical protein SCB49_04475 [unidentified eubacterium SCB49]
Length = 134
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN---KNRLNKDGY 142
EL RSSGPGGQHVN ++KV++ F V +N L ++I LN KN+++ +G
Sbjct: 9 ELVFKALRSSGPGGQHVNKTASKVEVHFNVQHSNAL---APSEIIRLNEKLKNKISSEGT 65
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+++ TRSQ N A + L N+I ++
Sbjct: 66 IVLNCGETRSQHKNKAIVIERLLNLITES 94
>gi|149374568|ref|ZP_01892342.1| Class I peptide chain release factor [Marinobacter algicola DG893]
gi|149361271|gb|EDM49721.1| Class I peptide chain release factor [Marinobacter algicola DG893]
Length = 137
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 59/92 (64%), Gaps = 9/92 (9%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDV----KKQLIELNKNRLNKDG 141
E+++T R+ G GGQ+VN V++ V +RF V LN + K++L+ L+ R++K+G
Sbjct: 14 EIELTQIRAQGAGGQNVNKVASAVHLRFDV-----LNSSLPPFYKERLMRLSDQRISKEG 68
Query: 142 YLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
++IK+ + R+ +LN DA+ L+ +I +A K
Sbjct: 69 VVVIKAQKFRTLELNKEDALERLKALIQEAVK 100
>gi|158334444|ref|YP_001515616.1| class I peptide chain release factor [Acaryochloris marina
MBIC11017]
gi|158304685|gb|ABW26302.1| class I peptide chain release factor, putative [Acaryochloris
marina MBIC11017]
Length = 141
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ R S E++++ RS G GGQ+VN V++ + +RF ++A++ L+ K++L+ L
Sbjct: 4 ITQRTSIPLSEIELSPIRSQGAGGQNVNKVASAIHLRFDIDASS-LSPLYKERLLNLGDR 62
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
R+ K+G +IIK+ + R+QQ N DA+ L+ ++
Sbjct: 63 RITKEGIIIIKAQQHRTQQQNREDALNRLQILLQ 96
>gi|71065398|ref|YP_264125.1| class I peptide chain release factor [Psychrobacter arcticus 273-4]
gi|71038383|gb|AAZ18691.1| probable class I peptide chain release factor (RF-1) [Psychrobacter
arcticus 273-4]
Length = 137
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++I+ R+ G GGQ+VN VS+ + +RF ++A++ L++ K++L++ +R+ K+G L+I
Sbjct: 14 DVEISAIRAQGAGGQNVNKVSSAIHLRFDISASS-LSDINKQRLLDSKDSRITKEGVLVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ + R+Q+ N DA L++ I KA
Sbjct: 73 KAQQFRTQEGNKIDAFERLQSFIIKA 98
>gi|399023947|ref|ZP_10725996.1| protein chain release factor B [Chryseobacterium sp. CF314]
gi|398081675|gb|EJL72448.1| protein chain release factor B [Chryseobacterium sp. CF314]
Length = 130
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
++EL+ SRSSG GGQ+VN V T V + +KV + + N+D K + KNR+N +G+
Sbjct: 4 FSKELNFKTSRSSGAGGQNVNKVETSVTVLWKVRESEFFNDDEKALIQNKLKNRINAEGF 63
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
L + +R+Q +N A+ + ++ KA
Sbjct: 64 LFLTVSESRTQLMNKNKAIEKIIELVDKA 92
>gi|365892382|ref|ZP_09430688.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. STM 3809]
gi|365331560|emb|CCE03219.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. STM 3809]
Length = 139
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++I++ R+SGPGGQ+VN +ST +RF + L ED +L L R+ K+G ++I
Sbjct: 14 DIEISFVRASGPGGQNVNKLSTSAQLRFDTSRIT-LPEDAAARLARLAGQRMTKNGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+++R R+Q+ N ADA+ L ++ +A
Sbjct: 73 QAERFRTQERNKADAIERLVTLLREA 98
>gi|448747972|ref|ZP_21729622.1| Peptide chain release factor class I/class II [Halomonas titanicae
BH1]
gi|445564483|gb|ELY20603.1| Peptide chain release factor class I/class II [Halomonas titanicae
BH1]
Length = 164
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+DI+ R+ G GGQ+VN V++ V +RF + ++ L K++L+ L+ R++K+G +II
Sbjct: 40 EIDISQIRAQGAGGQNVNKVASAVHLRFDILSST-LPPLYKERLMALSDQRISKEGVVII 98
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R +LN DA+ L+ +I A K
Sbjct: 99 KAQSHRKLELNKEDALARLKELIQSATK 126
>gi|83595939|gb|ABC25299.1| peptidyl-tRNA hydrolase [uncultured marine bacterium Ant24C4]
Length = 138
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++R+SGPGGQ+VN VST V++RF+ + L E VK +L + + +G +++
Sbjct: 13 ELTEQFTRASGPGGQNVNKVSTAVELRFEAGRSPNLTEAVKWRLRRVAGQKWTNEGAVVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
TRSQ N A L++MI KA +
Sbjct: 73 FVQDTRSQARNREIAQKRLKDMILKACE 100
>gi|254252754|ref|ZP_04946072.1| Protein chain release factor B [Burkholderia dolosa AUO158]
gi|124895363|gb|EAY69243.1| Protein chain release factor B [Burkholderia dolosa AUO158]
Length = 135
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K +L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPAIKARLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IKS R+Q+ N A+ L +I A
Sbjct: 63 RDGIVVIKSQEHRTQEKNREAALARLDALIRSVA 96
>gi|317047005|ref|YP_004114653.1| class I peptide chain release factor [Pantoea sp. At-9b]
gi|316948622|gb|ADU68097.1| Class I peptide chain release factor [Pantoea sp. At-9b]
Length = 136
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+V+ R + E E++++ R+ G GGQHVN ST + +RF +NA++ L K++L+
Sbjct: 2 IVLSRSVSLPENEVELSAIRAQGAGGQHVNKTSTAIHLRFDINASS-LPPFYKERLLGAR 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ + +DG +IIK+ RSQ++N A+ L N+I
Sbjct: 61 HHLITEDGVVIIKAQEYRSQEMNREAALQRLINLI 95
>gi|305665872|ref|YP_003862159.1| class I peptide chain release factor [Maribacter sp. HTCC2170]
gi|88710647|gb|EAR02879.1| Class I peptide chain release factor [Maribacter sp. HTCC2170]
Length = 134
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
S + +EL RSSG GGQHVN VS+K+++ F V A+N L+E K+++ + RL K+
Sbjct: 4 STLLQELKFKAIRSSGAGGQHVNKVSSKIELTFDVLASNALSEIEKERISKKLITRLTKE 63
Query: 141 GYLIIKSDRTRSQQLN 156
LI+++D RSQ N
Sbjct: 64 NILILQADDYRSQHRN 79
>gi|148253239|ref|YP_001237824.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium
sp. BTAi1]
gi|365883983|ref|ZP_09423073.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. ORS 375]
gi|367473030|ref|ZP_09472600.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. ORS 285]
gi|146405412|gb|ABQ33918.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. BTAi1]
gi|365274714|emb|CCD85068.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. ORS 285]
gi|365287499|emb|CCD95604.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. ORS 375]
Length = 139
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++I++ R+SGPGGQ+VN +ST +RF + L ED +L L R+ K+G ++I
Sbjct: 14 DIEISFVRASGPGGQNVNKLSTSAQLRFDTSRIT-LPEDAAARLARLAGQRMTKNGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+++R R+Q+ N ADA+ L ++ +A
Sbjct: 73 QAERFRTQERNKADAIERLVTLLREA 98
>gi|381405585|ref|ZP_09930269.1| hypothetical protein S7A_15090 [Pantoea sp. Sc1]
gi|380738784|gb|EIB99847.1| hypothetical protein S7A_15090 [Pantoea sp. Sc1]
Length = 136
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + AA+ L K++L+ + + + +G ++I
Sbjct: 14 EIELTAIRAQGAGGQHVNKASTAIHLRFDI-AASSLPAFYKERLLTASHHLITAEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ++N A+ L N+I
Sbjct: 73 KAQEYRSQEMNREAALQRLLNLI 95
>gi|339327640|ref|YP_004687333.1| hypothetical protein CNE_1c35590 [Cupriavidus necator N-1]
gi|338167798|gb|AEI78853.1| hypothetical protein CNE_1c35590 [Cupriavidus necator N-1]
Length = 151
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 6/98 (6%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
+VIP Y+ IT R+ G GGQ++N VS V +R+ V+A++ L D K++L+ L+
Sbjct: 22 LVIPHHEYL-----ITAIRAQGAGGQNINKVSNAVHLRYDVHASS-LAPDHKERLLALHD 75
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+R+ +DG ++IK+ + RS N +A+ L ++ A
Sbjct: 76 HRITRDGVVVIKAQQFRSLDQNRDEAVRRLHELVRSVA 113
>gi|226227934|ref|YP_002762040.1| hypothetical protein GAU_2528 [Gemmatimonas aurantiaca T-27]
gi|226091125|dbj|BAH39570.1| hypothetical protein GAU_2528 [Gemmatimonas aurantiaca T-27]
Length = 146
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ELD+ GPGGQHVN +T++ I++ V L ++ + +++E +RL+ DG L
Sbjct: 20 DELDVRAISGGGPGGQHVNKSATRISIQWNVRTTRALRDEQRARVLEKLASRLDGDGALR 79
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKA 171
I + RSQQ N A+ L+ +I +A
Sbjct: 80 IVAGEFRSQQQNRRAALERLQQLISRA 106
>gi|193216341|ref|YP_001997540.1| class I peptide chain release factor [Chloroherpeton thalassium
ATCC 35110]
gi|193089818|gb|ACF15093.1| Class I peptide chain release factor [Chloroherpeton thalassium
ATCC 35110]
Length = 144
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 58/102 (56%)
Query: 73 IPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIEL 132
+ ++ P+ S E++ ++RSSG GGQ+VN V TKV++ F + + L++ +K+ L+
Sbjct: 5 VLLINPKLSIPVSEIEYRFARSSGKGGQNVNKVETKVELYFDIANSLSLSDMMKRLLLHK 64
Query: 133 NKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
K R++ +G L + +RSQ N +A R ++ A P
Sbjct: 65 LKGRISSEGVLRLSCSASRSQIKNREEATQRFRKLLQTALAP 106
>gi|442608446|ref|ZP_21023199.1| Hypothetical protein YaeJ with similarity to translation release
factor [Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441750322|emb|CCQ09261.1| Hypothetical protein YaeJ with similarity to translation release
factor [Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 137
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN V++ + ++F + A + L E K +L+ L+ +R+ K+G ++I
Sbjct: 14 EIELTAIRAQGAGGQNVNKVASAIHLKFDI-ARSSLPEFYKTRLLALSDSRITKEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R+Q+ N DA+ L+N+I +K
Sbjct: 73 KAQAFRTQEQNKEDALNRLQNLIVAVSK 100
>gi|409402534|ref|ZP_11252076.1| class I peptide chain release factor [Acidocella sp. MX-AZ02]
gi|409128891|gb|EKM98768.1| class I peptide chain release factor [Acidocella sp. MX-AZ02]
Length = 139
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+L+ ++ +SGPGGQ+VN VST V +RF + L VK +L L RL G+++I
Sbjct: 15 DLEEFFTPASGPGGQNVNKVSTAVQLRFDLVGNTTLPGHVKARLARLAGKRLTLSGHILI 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
+S+ RSQ N +A L +I +AA
Sbjct: 75 ESEEHRSQLRNREEAREKLFALIQEAA 101
>gi|241570284|ref|XP_002402675.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502057|gb|EEC11551.1| conserved hypothetical protein [Ixodes scapularis]
Length = 150
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 38/154 (24%)
Query: 10 LISNQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIPVKAPDGLK- 68
++N ++ R YKS++SLDK+YP+S + N V PV+AP
Sbjct: 21 FVANTPSLSARSYKSAVSLDKIYPDSDL------------------NHVKPVEAPQSTNE 62
Query: 69 -FNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKK 127
F+G IP ++ R + PG +V++R +++A W+ + +
Sbjct: 63 VFSGYIP------------MNRVEVRENNPGNPF------RVELRVHLDSAEWIPQSGRD 104
Query: 128 QLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAM 161
+L +L K ++ DG L++ SD+T+ + +N+AD +
Sbjct: 105 RLKKLAKVYIDADGKLVVSSDKTKKKLVNVADCV 138
>gi|308185762|ref|YP_003929893.1| hypothetical protein Pvag_0224 [Pantoea vagans C9-1]
gi|308056272|gb|ADO08444.1| Uncharacterized protein yaeJ [Pantoea vagans C9-1]
Length = 136
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + AA+ L K++L+ + + + +G ++I
Sbjct: 14 EIELTAIRAQGAGGQHVNKASTAIHLRFDI-AASSLPAFYKERLLTASHHLITGEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWK 170
K+ RSQ++N A+ L N+I +
Sbjct: 73 KAQEYRSQEMNREAALQRLVNLIQE 97
>gi|241664320|ref|YP_002982680.1| peptidyl-tRNA hydrolase domain-containing protein [Ralstonia
pickettii 12D]
gi|240866347|gb|ACS64008.1| Class I peptide chain release factor [Ralstonia pickettii 12D]
Length = 169
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P+ S EL + R+SG GGQ++N VST V++RF + + L E ++ +L+
Sbjct: 8 ITPQLSIPESELVERFVRASGAGGQNINKVSTAVELRFDIAQSPSLPEALRARLLGKRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
RL +G ++I + R R+Q N DA L I
Sbjct: 68 RLTDEGVIVIDAQRFRTQDRNRQDARERLAAFI 100
>gi|187930170|ref|YP_001900657.1| peptidyl-tRNA hydrolase domain-containing protein [Ralstonia
pickettii 12J]
gi|187727060|gb|ACD28225.1| Class I peptide chain release factor [Ralstonia pickettii 12J]
Length = 144
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P+ S EL + R+SG GGQ++N VST V++RF + + L + ++ +L+E
Sbjct: 8 ITPQLSIPESELVERFVRASGAGGQNINKVSTAVELRFDIAQSPSLPDALRARLLEKRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
RL +G +I + R R+Q N DA L I
Sbjct: 68 RLTDEGVFVIDAQRFRTQDRNRQDARERLAAFI 100
>gi|408374910|ref|ZP_11172590.1| peptidyl-tRNA hydrolase [Alcanivorax hongdengensis A-11-3]
gi|407765195|gb|EKF73652.1| peptidyl-tRNA hydrolase [Alcanivorax hongdengensis A-11-3]
Length = 138
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E+D+ R+ G GGQ+VN V++ + +RF + A++ L E K++L+ ++ R+ DG ++
Sbjct: 13 HEIDMQAIRAQGSGGQNVNKVASAIHLRFDIRASS-LPERYKERLLAMSDQRITSDGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIW 169
IK+ + R+Q++N +A+ L +I
Sbjct: 72 IKAQQFRTQEMNRENALARLSQLIQ 96
>gi|352102035|ref|ZP_08959082.1| class I peptide chain release factor [Halomonas sp. HAL1]
gi|350600206|gb|EHA16276.1| class I peptide chain release factor [Halomonas sp. HAL1]
Length = 138
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+DI+ R+ G GGQ+VN V++ V +RF + ++ L K++L+ L+ R++K+G +II
Sbjct: 14 EIDISQIRAQGAGGQNVNKVASAVHLRFDILSST-LPPLYKERLMALSDQRISKEGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R +LN DA+ L+ +I A K
Sbjct: 73 KAQSHRKLELNKEDALARLKELIQSATK 100
>gi|315497891|ref|YP_004086695.1| class i peptide chain release factor [Asticcacaulis excentricus CB
48]
gi|315415903|gb|ADU12544.1| Class I peptide chain release factor [Asticcacaulis excentricus CB
48]
Length = 143
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 8/85 (9%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNE----DVKKQLIE 131
+ P+ S EL ++ RSSG GGQ+VN VST V++RF + W N+ +VK++LI
Sbjct: 4 ITPKISVDEAELSESFVRSSGAGGQNVNKVSTAVELRFSI----WENQTIPYEVKQRLIV 59
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLN 156
L R+ +DG L++ R+Q +N
Sbjct: 60 LGGRRVTQDGVLVLFVQTHRTQDMN 84
>gi|156976614|ref|YP_001447520.1| peptidyl-tRNA hydrolase domain-containing protein [Vibrio harveyi
ATCC BAA-1116]
gi|156528208|gb|ABU73293.1| hypothetical protein VIBHAR_05388 [Vibrio harveyi ATCC BAA-1116]
Length = 137
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ + R+ G GGQ+VN VS+ + +RF V + L E K++L+ L+ +R++KDG +II
Sbjct: 14 EIQLLPIRAQGNGGQNVNKVSSAIHLRFDVRHST-LPEFYKERLLALSDSRISKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I A++
Sbjct: 73 KAQQFRTQEQNKEDALNRLQALIQSASR 100
>gi|375098073|ref|ZP_09744338.1| protein chain release factor B [Saccharomonospora marina XMU15]
gi|374658806|gb|EHR53639.1| protein chain release factor B [Saccharomonospora marina XMU15]
Length = 145
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R + EL +SR+SGPGGQ VN+ S++V++ F + + + ED++ +L+ NRLN
Sbjct: 13 RLAVPDAELTERFSRASGPGGQGVNTTSSRVELSFDLARSPSVPEDLRPRLLARLANRLN 72
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
G L + + R+Q N A L ++ +AA P P+
Sbjct: 73 -GGVLTVVASEHRAQLANRQAARERLVALLREAAAPPPR 110
>gi|417710827|ref|ZP_12359836.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-272]
gi|417715493|ref|ZP_12364431.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-227]
gi|333011033|gb|EGK30452.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-272]
gi|333021828|gb|EGK41077.1| peptidyl-tRNA hydrolase domain protein [Shigella flexneri K-227]
Length = 140
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R G GGQ+VN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRVQGAGGQNVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
+ ++ DG ++IK+ RSQ+LN A+ L
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARL 91
>gi|220934855|ref|YP_002513754.1| Class I peptide chain release factor [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219996165|gb|ACL72767.1| Class I peptide chain release factor [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 138
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
E++I+ R+ G GGQ+VN VS+ + +RF + ++ L + K +L+ L +R+ ++G +I
Sbjct: 13 HEIEISAIRAQGAGGQNVNKVSSAIHLRFDIPGSS-LPDFYKTRLLALRDHRITREGVVI 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
IK+ R R+Q+ N DA+ L +I A
Sbjct: 72 IKAQRFRTQEGNREDALRRLAELIRSVA 99
>gi|365538628|ref|ZP_09363803.1| peptidyl-tRNA hydrolase domain protein [Vibrio ordalii ATCC 33509]
Length = 137
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R++G GGQ+VN VS+ + +RF + + L + K++L+E +R+ K+G +++
Sbjct: 14 EIELTAIRAAGNGGQNVNKVSSAIHLRFDIRRST-LPDIYKQKLLERPDSRMTKEGVIVL 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
K+ R+Q+LN DA+ L+ +I A
Sbjct: 73 KAQSHRTQELNKEDALKRLKEIILSA 98
>gi|291616369|ref|YP_003519111.1| YaeJ [Pantoea ananatis LMG 20103]
gi|386014761|ref|YP_005933038.1| class I peptide chain release factor YaeJ [Pantoea ananatis
AJ13355]
gi|386080570|ref|YP_005994095.1| class I peptide chain release factor YaeJ [Pantoea ananatis PA13]
gi|291151399|gb|ADD75983.1| YaeJ [Pantoea ananatis LMG 20103]
gi|327392820|dbj|BAK10242.1| class I peptide chain release factor YaeJ [Pantoea ananatis
AJ13355]
gi|354989751|gb|AER33875.1| class I peptide chain release factor YaeJ [Pantoea ananatis PA13]
Length = 136
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + AA+ L K++L+ + + + DG +II
Sbjct: 14 EIELTAIRAQGSGGQHVNKTSTAIHLRFDI-AASSLPPFYKERLLNASHHLITGDGTVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ++N A+ L N+I
Sbjct: 73 KAQEYRSQEMNREAALQRLVNLI 95
>gi|153832880|ref|ZP_01985547.1| class I peptide chain release factor [Vibrio harveyi HY01]
gi|388598500|ref|ZP_10156896.1| peptidyl-tRNA hydrolase domain-containing protein [Vibrio
campbellii DS40M4]
gi|444427907|ref|ZP_21223271.1| peptidyl-tRNA hydrolase domain-containing protein [Vibrio
campbellii CAIM 519 = NBRC 15631]
gi|148870803|gb|EDL69702.1| class I peptide chain release factor [Vibrio harveyi HY01]
gi|444238856|gb|ELU50443.1| peptidyl-tRNA hydrolase domain-containing protein [Vibrio
campbellii CAIM 519 = NBRC 15631]
Length = 137
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ + R+ G GGQ+VN VS+ + +RF V + L E K++L+ L+ +R++KDG +II
Sbjct: 14 EIQLLPIRAQGNGGQNVNKVSSAIHLRFDVRHST-LPEFYKERLLALSDSRISKDGVIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I A++
Sbjct: 73 KAQQFRTQEQNKEDALNRLQALIQSASR 100
>gi|376315967|emb|CCF99371.1| class i peptide chain release factor [uncultured Flavobacteriia
bacterium]
Length = 134
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 93 RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRS 152
RSSGPGGQHVN S+K+ + F ++ +N L E+ K++L++ ++++ DGY+ + TRS
Sbjct: 16 RSSGPGGQHVNKTSSKIVLSFHIHNSNGLEENEKERLLKKLASKISSDGYVKLSCSNTRS 75
Query: 153 QQLN 156
Q N
Sbjct: 76 QHQN 79
>gi|116749741|ref|YP_846428.1| class I peptide chain release factor [Syntrophobacter fumaroxidans
MPOB]
gi|116698805|gb|ABK17993.1| Class I peptide chain release factor [Syntrophobacter fumaroxidans
MPOB]
Length = 144
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R S EEL T S SSGPGGQ+VN ++T+V +RF + + L+ + K + R+
Sbjct: 7 RISIPEEELSFTASLSSGPGGQNVNKLNTRVTLRFDLANSPSLSPEDKALIATRLGTRIA 66
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAP 176
KDG L + S TRSQ N A+ ++ A K AP
Sbjct: 67 KDGMLRVVSQSTRSQHANRELAVERFAELLKSALKRAP 104
>gi|72161594|ref|YP_289251.1| peptidyl-tRNA hydrolase domain protein [Thermobifida fusca YX]
gi|71915326|gb|AAZ55228.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 142
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 74 PVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
P+ PR +EL +SRSSGPGGQH N+ ST+V + V L E+ +++++
Sbjct: 5 PLGAPRVELRDDELVWRFSRSSGPGGQHANTASTRVSLSLDVTTTAVLTEEQRERVLRRL 64
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
RL DG L + + RSQ N A L ++ +AA+P
Sbjct: 65 GPRLV-DGVLTVSAQDFRSQARNREVAWERLAALLSEAARP 104
>gi|378768449|ref|YP_005196922.1| class I peptide chain release factor [Pantoea ananatis LMG 5342]
gi|365187935|emb|CCF10885.1| class I peptide chain release factor [Pantoea ananatis LMG 5342]
Length = 134
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQHVN ST + +RF + AA+ L K++L+ + + + DG +II
Sbjct: 12 EIELTAIRAQGSGGQHVNKTSTAIHLRFDI-AASSLPPFYKERLLNASHHLITGDGTVII 70
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ RSQ++N A+ L N+I
Sbjct: 71 KAQEYRSQEMNREAALQRLVNLI 93
>gi|59714338|ref|YP_207113.1| peptidyl-tRNA hydrolase domain protein [Vibrio fischeri ES114]
gi|197336732|ref|YP_002158795.1| class I peptide chain release factor [Vibrio fischeri MJ11]
gi|423688404|ref|ZP_17663207.1| hypothetical protein VFSR5_A1098 [Vibrio fischeri SR5]
gi|59482586|gb|AAW88225.1| conserved protein [Vibrio fischeri ES114]
gi|197313984|gb|ACH63433.1| class I peptide chain release factor [Vibrio fischeri MJ11]
gi|371492907|gb|EHN68513.1| hypothetical protein VFSR5_A1098 [Vibrio fischeri SR5]
Length = 137
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF ++ + L K++L+++ +R+ K+G +II
Sbjct: 14 EIELTAIRAQGAGGQNVNKVSSAIHLRFDISRST-LPAFYKERLLKMRDHRITKEGIIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L+ +I A +
Sbjct: 73 KAQQFRTQEKNREDALDRLKQLIQSATE 100
>gi|209886352|ref|YP_002290209.1| peptidyl-tRNA hydrolase domain-containing protein [Oligotropha
carboxidovorans OM5]
gi|337740109|ref|YP_004631837.1| peptide chain release factor protein [Oligotropha carboxidovorans
OM5]
gi|386029126|ref|YP_005949901.1| putative peptide chain release factor protein [Oligotropha
carboxidovorans OM4]
gi|209874548|gb|ACI94344.1| class I peptide chain release factor [Oligotropha carboxidovorans
OM5]
gi|336094194|gb|AEI02020.1| putative peptide chain release factor protein [Oligotropha
carboxidovorans OM4]
gi|336097773|gb|AEI05596.1| putative peptide chain release factor protein [Oligotropha
carboxidovorans OM5]
Length = 138
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 91 YSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRT 150
+ R+SGPGGQ+VN +ST +R V + L D +L L R+ KDG L++ + R
Sbjct: 19 FVRASGPGGQNVNKLSTAAQLRLDVGRLS-LAPDTFTRLQTLAGQRMTKDGVLVLHAQRF 77
Query: 151 RSQQLNLADAMTTLRNMIWKAA-KPAPQ 177
R+Q+ N ADA+ L ++ +AA +P P+
Sbjct: 78 RTQERNRADAIERLLVLLREAAVRPKPR 105
>gi|372270487|ref|ZP_09506535.1| hypothetical protein MstaS_05399 [Marinobacterium stanieri S30]
Length = 137
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++ R+ G GGQ+VN VS+ + +RF + A++ L K++L+ L+ +R++ DG ++I
Sbjct: 14 EIELNAIRAQGAGGQNVNKVSSAIHLRFDIQASS-LPAFYKERLLGLSDSRISSDGIIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ + R+Q+ N DA+ L +I A K
Sbjct: 73 KAQQYRTQEQNREDALMRLVELIRNAVK 100
>gi|146342892|ref|YP_001207940.1| peptidyl-tRNA hydrolase domain-containing protein [Bradyrhizobium
sp. ORS 278]
gi|146195698|emb|CAL79725.1| putative Class I peptide chain release factor domain protein
[Bradyrhizobium sp. ORS 278]
Length = 139
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
+++I++ R+SGPGGQ+VN +ST +RF + L ED +L L R+ K G ++I
Sbjct: 14 DIEISFVRASGPGGQNVNKLSTSAQLRFDTSRIT-LPEDAAARLARLAGQRMTKTGVIVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+++R R+Q+ N ADA+ L ++ +A
Sbjct: 73 QAERFRTQERNKADAIERLVTLLREA 98
>gi|431798287|ref|YP_007225191.1| protein chain release factor B [Echinicola vietnamensis DSM 17526]
gi|430789052|gb|AGA79181.1| protein chain release factor B [Echinicola vietnamensis DSM 17526]
Length = 138
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
+ EL ++S GPGGQ+VN V+TKV + F V +N L+++ K++++ ++LN +G+
Sbjct: 13 FSSELTFKTTKSGGPGGQNVNKVNTKVQLIFDVKGSNILDDEAKEKVLARLSDKLNAEGH 72
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWK 170
L + TRSQ N A+ + MI K
Sbjct: 73 LQVTVQETRSQLQNKTLAVEKFQAMIKK 100
>gi|206559485|ref|YP_002230246.1| peptidyl-tRNA hydrolase domain-containing [Burkholderia cenocepacia
J2315]
gi|421868993|ref|ZP_16300637.1| hypothetical protein YaeJ with similarity to translation release
factor [Burkholderia cenocepacia H111]
gi|444358297|ref|ZP_21159734.1| RF-1 domain protein [Burkholderia cenocepacia BC7]
gi|444369402|ref|ZP_21169156.1| RF-1 domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|198035523|emb|CAR51402.1| putative release factor [Burkholderia cenocepacia J2315]
gi|358071129|emb|CCE51515.1| hypothetical protein YaeJ with similarity to translation release
factor [Burkholderia cenocepacia H111]
gi|443599153|gb|ELT67457.1| RF-1 domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|443604368|gb|ELT72307.1| RF-1 domain protein [Burkholderia cenocepacia BC7]
Length = 134
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPVLKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IKS R+Q+ N A+ L +I A
Sbjct: 63 RDGIVVIKSQEYRTQEKNREAALARLDTLIGSVA 96
>gi|148554293|ref|YP_001261875.1| peptidyl-tRNA hydrolase domain-containing protein [Sphingomonas
wittichii RW1]
gi|148499483|gb|ABQ67737.1| Class I peptide chain release factor [Sphingomonas wittichii RW1]
Length = 140
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 56/88 (63%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYL 143
++E++ +++R+ GPGGQ VN+ + V +RF V + L + VK +L + +R+ ++G L
Sbjct: 14 SDEIEESFTRAGGPGGQGVNTTDSAVMLRFDVRNSPNLPDAVKIRLDAIAGSRMTREGVL 73
Query: 144 IIKSDRTRSQQLNLADAMTTLRNMIWKA 171
+++S+ RSQ LN + L ++I +A
Sbjct: 74 VLRSEGARSQLLNRQEVRERLFDLIREA 101
>gi|89052517|ref|YP_507968.1| peptidyl-tRNA hydrolase domain-containing protein [Jannaschia sp.
CCS1]
gi|88862066|gb|ABD52943.1| Class I peptide chain release factor [Jannaschia sp. CCS1]
Length = 139
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + R+SGPGGQ+VN VS+ V++RF+ + L++ VK++L L R KDG +++
Sbjct: 15 ELTEQFVRASGPGGQNVNKVSSAVELRFEAERSPALSDAVKRRLKRLAGRRWTKDGAVVL 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
+ RSQ N A L ++ ++A P+
Sbjct: 75 QVSEERSQARNRELARERLAELV-RSATAVPK 105
>gi|124268741|ref|YP_001022745.1| hypothetical protein Mpe_A3557 [Methylibium petroleiphilum PM1]
gi|124261516|gb|ABM96510.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 136
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSD 148
T R+ G GGQ+VN VS+ + +RF V A++ L + +L+ LN RL+ DG ++IK+
Sbjct: 16 CTAVRAQGAGGQNVNKVSSAIHLRFDVPASS-LPPAHRARLLALNDQRLSSDGVIVIKAQ 74
Query: 149 RTRSQQLNLADAMTTLRNMIWKAAKP 174
R+Q N DA+ L ++ A P
Sbjct: 75 EQRTQARNREDALQRLLELVASVATP 100
>gi|330802428|ref|XP_003289219.1| hypothetical protein DICPUDRAFT_22470 [Dictyostelium purpureum]
gi|325080706|gb|EGC34250.1| hypothetical protein DICPUDRAFT_22470 [Dictyostelium purpureum]
Length = 139
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 87 LDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIK 146
+ +S+SSGPGGQ+VN V+TK ++R + ANW+ VK++L +NK+ LII
Sbjct: 11 MSYKFSKSSGPGGQNVNKVNTKCELRVNLETANWIPTWVKEKLATNFTRMVNKENILIIA 70
Query: 147 SDRTRSQQLNLADAMTTLRNMI 168
S + R Q N + + L++++
Sbjct: 71 STKHRDQDQNRKEVLNKLQHIL 92
>gi|107022292|ref|YP_620619.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
cenocepacia AU 1054]
gi|116689239|ref|YP_834862.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
cenocepacia HI2424]
gi|170732540|ref|YP_001764487.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
cenocepacia MC0-3]
gi|254245828|ref|ZP_04939149.1| Protein chain release factor B [Burkholderia cenocepacia PC184]
gi|105892481|gb|ABF75646.1| Class I peptide chain release factor [Burkholderia cenocepacia AU
1054]
gi|116647328|gb|ABK07969.1| Class I peptide chain release factor [Burkholderia cenocepacia
HI2424]
gi|124870604|gb|EAY62320.1| Protein chain release factor B [Burkholderia cenocepacia PC184]
gi|169815782|gb|ACA90365.1| Class I peptide chain release factor [Burkholderia cenocepacia
MC0-3]
Length = 134
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPVLKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IKS R+Q+ N A+ L +I A
Sbjct: 63 RDGIVVIKSQEYRTQEKNREAALARLDTLIGSVA 96
>gi|408418760|ref|YP_006760174.1| hypothetical protein TOL2_C13070 [Desulfobacula toluolica Tol2]
gi|405105973|emb|CCK79470.1| conserved uncharacterized protein related to peptide chain release
factor RF1 [Desulfobacula toluolica Tol2]
Length = 137
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 93 RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRS 152
R+ G GGQ+VN VST + +RF + A++ L + VK +L+ L+ R++K G L+IK+ R+
Sbjct: 21 RAQGAGGQNVNKVSTAIHLRFDIQASS-LPDQVKDKLLSLSDQRISKTGVLVIKAQTFRT 79
Query: 153 QQLNLADAMTTLRNMIW 169
Q+ N DA+ L+ ++
Sbjct: 80 QEKNKEDALNRLQKIVQ 96
>gi|149923921|ref|ZP_01912308.1| hypothetical protein PPSIR1_15600 [Plesiocystis pacifica SIR-1]
gi|149815209|gb|EDM74757.1| hypothetical protein PPSIR1_15600 [Plesiocystis pacifica SIR-1]
Length = 140
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
VVIP EL T S GPGGQHVN V+TKV +R+ + + L E + +L+
Sbjct: 10 VVIP-----ARELSWTAVASGGPGGQHVNKVATKVQLRWTLANSESLPEWARARLVAAAG 64
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+++DG L+I TRSQ N A L +M+
Sbjct: 65 RFIDRDGNLLISCASTRSQDRNRELARERLADMV 98
>gi|289208933|ref|YP_003460999.1| class I peptide chain release factor [Thioalkalivibrio sp. K90mix]
gi|288944564|gb|ADC72263.1| Class I peptide chain release factor [Thioalkalivibrio sp. K90mix]
Length = 139
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++T R+ G GGQ+VN V++ + +RF + A++ L E K++L+ R++KDG ++
Sbjct: 14 DEIELTAIRAQGAGGQNVNKVASAIHLRFDIRASS-LPEVYKQRLLRRRDQRISKDGVVV 72
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
IK+ + R+Q+ N DA+ L ++ +A +P
Sbjct: 73 IKAQQYRTQEANREDALERLAELLREAGRP 102
>gi|110832920|ref|YP_691779.1| peptidyl-tRNA hydrolase [Alcanivorax borkumensis SK2]
gi|110646031|emb|CAL15507.1| peptidyl-tRNA hydrolase [Alcanivorax borkumensis SK2]
Length = 140
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+D+ R+ G GGQ+VN V++ + +RF + A++ L + K++L+ L+ R+ DG ++I
Sbjct: 16 EIDLQAIRAQGSGGQNVNKVASAIHLRFDIRASS-LPDRYKERLLALSDQRITSDGVVVI 74
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ + R+Q++N +A+ L +I
Sbjct: 75 KAQQFRTQEMNKENALARLAQLI 97
>gi|331006517|ref|ZP_08329816.1| hypothetical protein IMCC1989_379 [gamma proteobacterium IMCC1989]
gi|330419685|gb|EGG94052.1| hypothetical protein IMCC1989_379 [gamma proteobacterium IMCC1989]
Length = 124
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 93 RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRS 152
R+ G GGQHVN ST + ++F + A++ L E K++L+ + R++KDG + IK+ R RS
Sbjct: 7 RAQGAGGQHVNKTSTAIHLQFVIGASS-LAEVHKERLLNYSDYRISKDGVITIKAQRFRS 65
Query: 153 QQLNLADAMTTLRNMIWKA 171
Q N DA+ L +I KA
Sbjct: 66 QDKNKQDAIERLYALIDKA 84
>gi|385234833|ref|YP_005796175.1| class I peptide chain release factor [Ketogulonicigenium vulgare
WSH-001]
gi|343463744|gb|AEM42179.1| Class I peptide chain release factor [Ketogulonicigenium vulgare
WSH-001]
Length = 141
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + R+SGPGGQ+VN VST V++RF+ + L + VK++L L R DG +II
Sbjct: 14 ELTEQFVRASGPGGQNVNKVSTAVELRFEAERSPTLPDPVKRRLKRLAGWRWTGDGAIII 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
TRSQ N A L +I
Sbjct: 74 AVQDTRSQARNREIARERLAELI 96
>gi|146282059|ref|YP_001172212.1| peptidyl-tRNA hydrolase domain-containing protein [Pseudomonas
stutzeri A1501]
gi|145570264|gb|ABP79370.1| peptidyl-tRNA hydrolase domain protein [Pseudomonas stutzeri A1501]
Length = 182
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+++T R+ G GGQ+VN VS+ + +RF + ++ L K++L+ L +R+ +G ++I
Sbjct: 59 EIELTAIRAQGAGGQNVNKVSSALHLRFDIRGSS-LPAFYKERLLALRDSRITAEGVVVI 117
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAK 173
K+ R R+Q+ N DA+ L +I K
Sbjct: 118 KAQRYRTQEQNRLDALERLAELIRSVGK 145
>gi|167587566|ref|ZP_02379954.1| hypothetical protein BuboB_19632 [Burkholderia ubonensis Bu]
Length = 134
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEIEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPLLKERLLALSDQRVT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IKS R+Q+ N A+ L +I A
Sbjct: 63 RDGVVVIKSQEHRTQERNREAALARLDALIRSVA 96
>gi|78065796|ref|YP_368565.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia sp.
383]
gi|77966541|gb|ABB07921.1| Class I peptide chain release factor [Burkholderia sp. 383]
Length = 134
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPVIKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+DG ++IKS R+Q+ N A+ L +I
Sbjct: 63 RDGIVVIKSQEYRTQEKNREAALARLDALI 92
>gi|404397182|ref|ZP_10988975.1| hypothetical protein HMPREF0989_00730 [Ralstonia sp. 5_2_56FAA]
gi|348610631|gb|EGY60317.1| hypothetical protein HMPREF0989_00730 [Ralstonia sp. 5_2_56FAA]
Length = 144
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P+ S EL + R+SG GGQ++N VST V++RF + + L E ++ +L+
Sbjct: 8 ITPQLSIPESELVERFVRASGAGGQNINKVSTAVELRFDIAQSPSLPEALRARLLGKRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
RL +G ++I + R R+Q N DA L I
Sbjct: 68 RLTDEGVIVIDAQRFRTQDRNRQDARERLAAFI 100
>gi|148702536|gb|EDL34483.1| immature colon carcinoma transcript 1, isoform CRA_c [Mus musculus]
Length = 186
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 105 VSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTL 164
V++K ++RF + +A+W+ E V++++ +KN++NK G L++ S+ +R Q NLA+ + +
Sbjct: 75 VNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKI 134
Query: 165 RNMIWKAAK-PAPQISEDT-IDRIRI 188
R+MI +A++ P ED + R+RI
Sbjct: 135 RDMIAEASQVPKEPSKEDARLQRLRI 160
>gi|374374868|ref|ZP_09632526.1| Class I peptide chain release factor [Niabella soli DSM 19437]
gi|373231708|gb|EHP51503.1| Class I peptide chain release factor [Niabella soli DSM 19437]
Length = 133
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 83 ITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGY 142
++ E++ +RS G GGQ+VN V T V F +N + LNE+ K + E ++ DGY
Sbjct: 3 LSREIEFKTTRSGGKGGQNVNKVETAVIASFHINNSLLLNEEQKSVIKEKLGKKITSDGY 62
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIW-----KAAKPAPQISEDTID 184
L ++S R+Q N ADA + +I K A+ A +IS+ I+
Sbjct: 63 LQVRSQVFRTQMENKADAGRKIEALIAGAFHKKKARIATKISKGAIE 109
>gi|325286086|ref|YP_004261876.1| class I peptide chain release factor [Cellulophaga lytica DSM 7489]
gi|324321540|gb|ADY29005.1| Class I peptide chain release factor [Cellulophaga lytica DSM 7489]
Length = 134
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
+ I +EL RSSG GGQHVN VSTK+++ + + + + + K++L+ NRL K+
Sbjct: 4 AQIVQELQFKAVRSSGAGGQHVNKVSTKIELTYDLQNSTAVTDKEKERLLLKLSNRLTKE 63
Query: 141 GYLIIKSDRTRSQQLN 156
L+++ D +RSQ N
Sbjct: 64 NVLLLQCDDSRSQHKN 79
>gi|395233851|ref|ZP_10412089.1| hypothetical protein A936_09339 [Enterobacter sp. Ag1]
gi|394731707|gb|EJF31436.1| hypothetical protein A936_09339 [Enterobacter sp. Ag1]
Length = 140
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+ IT R+ G GGQHVN ST + +RF + A++ L E K +L+ ++ + + +G ++I
Sbjct: 14 EVTITAIRAQGAGGQHVNKTSTAIHLRFDIPASS-LPESYKIRLLAVSHHLITPEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWK 170
K+ RSQ++N A+ L ++I +
Sbjct: 73 KAQEYRSQEMNREAAVARLVSLIQE 97
>gi|393244458|gb|EJD51970.1| hypothetical protein AURDEDRAFT_82908 [Auricularia delicata
TFB-10046 SS5]
Length = 206
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 77 IPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNR 136
IPR + ++++++RSSGPGGQ+VN V+TK R + +NW+ E K L N
Sbjct: 68 IPRTA-----VELSFARSSGPGGQNVNKVNTKATARCSL-GSNWIPEWAKANL-RRNPAY 120
Query: 137 LNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G L++ SD TRSQ N+ +A+ L +I AA+
Sbjct: 121 SASSGSLLVSSDVTRSQSQNVDEALRKLHEIILAAAQ 157
>gi|171318886|ref|ZP_02908020.1| Class I peptide chain release factor [Burkholderia ambifaria MEX-5]
gi|171095916|gb|EDT40854.1| Class I peptide chain release factor [Burkholderia ambifaria MEX-5]
Length = 134
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPVIKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IKS R+Q+ N A+ L +I A
Sbjct: 63 RDGIVVIKSQEYRTQEKNRDAALARLDALIGSVA 96
>gi|170702101|ref|ZP_02893014.1| Class I peptide chain release factor [Burkholderia ambifaria
IOP40-10]
gi|170133001|gb|EDT01416.1| Class I peptide chain release factor [Burkholderia ambifaria
IOP40-10]
Length = 134
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPVIKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IKS R+Q+ N A+ L +I A
Sbjct: 63 RDGIVVIKSQEYRTQEKNRDAALARLDALIGSVA 96
>gi|429082345|ref|ZP_19145419.1| Hypothetical protein YaeJ with similarity to translation release
factor [Cronobacter condimenti 1330]
gi|426548898|emb|CCJ71460.1| Hypothetical protein YaeJ with similarity to translation release
factor [Cronobacter condimenti 1330]
Length = 169
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
EE+ + R+ G GGQHVN ST + +RF ++A++ L E+ K +L+ + + + +G ++
Sbjct: 13 EEVTFSAIRAQGAGGQHVNKSSTAIHLRFDIHASS-LPEEWKTRLLAASHHLITAEGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTL 164
IK+ RSQ++N A+ L
Sbjct: 72 IKAQEYRSQEMNREAALARL 91
>gi|381172846|ref|ZP_09881963.1| RF-1 domain protein [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|380686706|emb|CCG38450.1| RF-1 domain protein [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 143
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + EL + R+SG GGQ+VN VST V++RF V + L E ++ +L+
Sbjct: 8 ITPSLTIPPSELVERFVRASGAGGQNVNKVSTAVELRFDVAGSPSLPEPLRARLLSRRDR 67
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
R+ DG L+I + R+Q N DA L +I
Sbjct: 68 RMTADGVLVIDAQCFRTQDRNRDDARERLVEII 100
>gi|56695052|ref|YP_165399.1| peptidyl-tRNA hydrolase domain-containing protein [Ruegeria
pomeroyi DSS-3]
gi|56676789|gb|AAV93455.1| peptidyl-tRNA hydrolase domain protein [Ruegeria pomeroyi DSS-3]
Length = 139
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L VK +L L R +G +++
Sbjct: 14 ELSESFMRASGPGGQNVNKVSSAVELRFEAARSPSLPAPVKARLKRLAGRRWTGEGAIVL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA 171
+ D TRSQ N L +I +A
Sbjct: 74 QCDETRSQARNREIVRARLVELIARA 99
>gi|318062446|ref|ZP_07981167.1| hypothetical protein SSA3_31208 [Streptomyces sp. SA3_actG]
Length = 143
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 75 VVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNK 134
VV+P EL +SRSSGPGGQHVN+ T+V++ F + A L E K + +E
Sbjct: 11 VVLP-----EAELKWRFSRSSGPGGQHVNTSDTQVEVLFDLAATEALPEVWKARALERLA 65
Query: 135 NRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKA 171
RL G L +++ RSQ N A T L +++ +A
Sbjct: 66 PRLRDGGVLAVRASEHRSQWRNRELAATRLTSLLAEA 102
>gi|429092025|ref|ZP_19154674.1| Hypothetical protein YaeJ with similarity to translation release
factor [Cronobacter dublinensis 1210]
gi|429097021|ref|ZP_19159127.1| Hypothetical protein YaeJ with similarity to translation release
factor [Cronobacter dublinensis 582]
gi|426283361|emb|CCJ85240.1| Hypothetical protein YaeJ with similarity to translation release
factor [Cronobacter dublinensis 582]
gi|426743338|emb|CCJ80787.1| Hypothetical protein YaeJ with similarity to translation release
factor [Cronobacter dublinensis 1210]
Length = 140
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 88 DITYS--RSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
++T+S R+ G GGQHVN ST + +RF +NA++ L E+ K +L+ + + + +G ++I
Sbjct: 14 EVTFSAIRAQGAGGQHVNKSSTAIHLRFDINASS-LPEEWKARLLSASHHLITAEGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTL 164
K+ RSQ++N A+ L
Sbjct: 73 KAQEYRSQEMNREAALARL 91
>gi|226945520|ref|YP_002800593.1| peptidyl-tRNA hydrolase domain-containing protein [Azotobacter
vinelandii DJ]
gi|226720447|gb|ACO79618.1| Class I peptide chain release factor [Azotobacter vinelandii DJ]
Length = 137
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+E+++ R+ G GGQ+VN VS+ V +RF + A++ L + K++L+ L R+ +G ++
Sbjct: 13 DEIELNAIRAQGAGGQNVNKVSSAVHLRFDIRASS-LPDFYKERLLALRDQRIGGEGVVV 71
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA 172
IK+ R R+++ N ADA+ L +I A
Sbjct: 72 IKAQRYRTREQNRADALERLVALIRSVA 99
>gi|443897591|dbj|GAC74931.1| predicted peptidyl-tRNA hydrolase [Pseudozyma antarctica T-34]
Length = 229
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAAN--------------WLNEDVKKQLIE 131
++D+T+SRSSGPGGQ+VN ++TK ++R ++ A WL D+ ++ +
Sbjct: 84 DMDVTFSRSSGPGGQNVNKLNTKANVRLDLSQAGAHAHDSLDAAHPRKWLTRDLVSRIAK 143
Query: 132 LNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPA--PQISEDTIDRIR 187
+ + D +++ S R R+Q+ N+ DA+ + I + A+ + S++ DR++
Sbjct: 144 GSPYYVASDHSMLVTSMRHRTQEANVQDALEKMHAHILELAQDGLVGETSQEQRDRVK 201
>gi|238026523|ref|YP_002910754.1| hypothetical protein [Burkholderia glumae BGR1]
gi|237875717|gb|ACR28050.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
glumae BGR1]
Length = 134
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++++ R+ G GGQ+VN VS+ + +RF + A++ L + +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVELSAMRAQGAGGQNVNKVSSAIHLRFDIRASS-LPDLLKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
++G +++KS + R+Q+ N A+ L +I A
Sbjct: 63 REGVVVLKSQKYRTQEQNRVAALARLDALIASVA 96
>gi|172060155|ref|YP_001807807.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
ambifaria MC40-6]
gi|171992672|gb|ACB63591.1| Class I peptide chain release factor [Burkholderia ambifaria
MC40-6]
Length = 134
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPVIKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IKS R+Q+ N A+ L +I A
Sbjct: 63 RDGIVVIKSQEYRTQEKNRDAALARLDALIGSVA 96
>gi|398801972|ref|ZP_10561203.1| protein chain release factor B [Pantoea sp. GM01]
gi|398090654|gb|EJL81121.1| protein chain release factor B [Pantoea sp. GM01]
Length = 136
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 75 VVIPR-FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+V+ R S E++++ R+ G GGQHVN ST + +RF +NA++ L K++L+ +
Sbjct: 2 IVLSRSVSLADNEVELSAIRAQGAGGQHVNKTSTAIHLRFDINASS-LPPFYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWK 170
+ + +G +IIK+ RSQ++N A+ L N+I +
Sbjct: 61 HHLITAEGVVIIKAQEHRSQEMNREAAVQRLINLIQE 97
>gi|395769231|ref|ZP_10449746.1| hypothetical protein Saci8_05612 [Streptomyces acidiscabies 84-104]
Length = 141
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL +SRSSGPGGQHVN+ T+V++RF + L K++ +E RL DG +++
Sbjct: 17 ELIWRFSRSSGPGGQHVNTSDTQVELRFDLARTESLPPVWKERALERLAARLV-DGVIVV 75
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQ 177
++ RSQ N A L +++ +A P P+
Sbjct: 76 RASEHRSQWRNREAAAVRLASLLAEATAPPPK 107
>gi|333895489|ref|YP_004469364.1| hypothetical protein ambt_20355 [Alteromonas sp. SN2]
gi|332995507|gb|AEF05562.1| hypothetical protein ambt_20355 [Alteromonas sp. SN2]
Length = 137
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 76 VIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKN 135
+ P + ++++ R+ GPGGQ+VN VS+ + +R + A++ L ++VK L+ +
Sbjct: 4 ITPTITLEDSDIEMQAIRAQGPGGQNVNKVSSAIHLRLDIPASS-LPQEVKDTLLNTKDS 62
Query: 136 RLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
R++ DG ++K+ +R+Q+ N DA+ L+ I A K
Sbjct: 63 RISNDGVFVLKAQNSRTQEQNREDAIVRLKAWIVSATK 100
>gi|170724915|ref|YP_001758941.1| peptidyl-tRNA hydrolase domain-containing protein [Shewanella
woodyi ATCC 51908]
gi|169810262|gb|ACA84846.1| Class I peptide chain release factor [Shewanella woodyi ATCC 51908]
Length = 137
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + RSSG GGQH+N VST I F +NA++ L E K+ L++ +R+ K G +II
Sbjct: 14 EIEWQFIRSSGAGGQHLNKVSTAAQIIFDINASS-LPEFYKQALLKKADHRITKSGKIII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
K +RSQ N A+ ++ A
Sbjct: 73 KCQASRSQDFNRQTALEQFIELVASVA 99
>gi|115351154|ref|YP_772993.1| peptidyl-tRNA hydrolase domain-containing protein [Burkholderia
ambifaria AMMD]
gi|115281142|gb|ABI86659.1| Class I peptide chain release factor [Burkholderia ambifaria AMMD]
Length = 134
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPVIKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAA 172
+DG ++IKS R+Q+ N A+ L +I A
Sbjct: 63 RDGIVVIKSQEYRTQEKNRDAALARLDALIASVA 96
>gi|387789918|ref|YP_006254983.1| protein chain release factor B [Solitalea canadensis DSM 3403]
gi|379652751|gb|AFD05807.1| protein chain release factor B [Solitalea canadensis DSM 3403]
Length = 136
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%)
Query: 81 SYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKD 140
+ + EL SRSSG GGQ+VN V+TKV++ F + + + + K++L++ R+ KD
Sbjct: 6 AVLASELIYQMSRSSGKGGQNVNKVATKVEVGFSIEQSQLFSNEEKERLLQKLSGRITKD 65
Query: 141 GYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK 173
G + I S+ RSQ +N + L +++ A K
Sbjct: 66 GLIKITSEEERSQLMNKHRVIEKLAHILENALK 98
>gi|254429028|ref|ZP_05042735.1| hypothetical protein ADG881_2258 [Alcanivorax sp. DG881]
gi|196195197|gb|EDX90156.1| hypothetical protein ADG881_2258 [Alcanivorax sp. DG881]
Length = 138
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E+D+ R+ G GGQ+VN V++ + +RF + A++ L + K++L+ L+ R+ DG ++I
Sbjct: 14 EIDLQAIRAQGSGGQNVNKVASAIHLRFDIRASS-LPDRYKEKLLALSDQRITSDGVVVI 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ + R+Q++N +A+ L +I
Sbjct: 73 KAQQFRTQEMNKENALARLAQLI 95
>gi|416944017|ref|ZP_11934755.1| hypothetical protein B1M_22382 [Burkholderia sp. TJI49]
gi|325524099|gb|EGD02265.1| hypothetical protein B1M_22382 [Burkholderia sp. TJI49]
Length = 134
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 79 RFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLN 138
R++ E++ T R+ G GGQ+VN VS+ + +RF + A++ L +K++L+ L+ R+
Sbjct: 4 RYTLDPAEVEWTAVRAQGAGGQNVNKVSSAIHLRFDIRASS-LPPVLKERLLALSDQRIT 62
Query: 139 KDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+DG ++IKS R+Q+ N A+ L +I
Sbjct: 63 RDGIVVIKSQEHRTQEKNREAALARLDALI 92
>gi|387870323|ref|YP_005801693.1| hypothetical protein EPYR_00942 [Erwinia pyrifoliae DSM 12163]
gi|283477406|emb|CAY73322.1| Uncharacterized 15.2 kDa protein in pcaJ 3'region [Erwinia
pyrifoliae DSM 12163]
Length = 138
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+V+PR + + E++++ R+ G GGQHVN ST + +RF + A++ L + +++++ ++
Sbjct: 2 IVLPRGIVVPDAEIELSAIRAQGAGGQHVNKSSTAIHLRFDIRASS-LPDFYQQRMLAVS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ + +G +IIK+ RSQ++N A+ L N+I
Sbjct: 61 HHLITPEGMVIIKAQEYRSQEMNRDAALKRLENLI 95
>gi|85706095|ref|ZP_01037190.1| peptidyl-tRNA hydrolase domain protein [Roseovarius sp. 217]
gi|85669259|gb|EAQ24125.1| peptidyl-tRNA hydrolase domain protein [Roseovarius sp. 217]
Length = 152
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + R+SGPGGQ+VN VS+ V++RF+ + L VK +L L R K+G +++
Sbjct: 26 ELTEQFMRASGPGGQNVNKVSSAVELRFEAERSPNLPAPVKTRLRRLAGRRWTKEGAVVL 85
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA 172
+ D TRSQ N L ++I +A+
Sbjct: 86 QCDETRSQTRNREIVRDRLADLIRQAS 112
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,924,706,768
Number of Sequences: 23463169
Number of extensions: 118501239
Number of successful extensions: 312602
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 310238
Number of HSP's gapped (non-prelim): 1705
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)