Your job contains 1 sequence.
>psy14432
MNTILSFHKLISNQRNVVKRFYKSSISLDKLYPNSSMLLKTPTPDQVKAPDGLKFNGVIP
VKAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANW
LNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISE
DTIDRIRIR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14432
(189 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032261 - symbol:CG6094 species:7227 "Drosophila m... 321 7.1e-29 1
UNIPROTKB|Q3T116 - symbol:ICT1 "Peptidyl-tRNA hydrolase I... 226 1.1e-22 2
MGI|MGI:1915822 - symbol:Ict1 "immature colon carcinoma t... 225 3.7e-22 2
UNIPROTKB|F1NND9 - symbol:ICT1 "Uncharacterized protein" ... 223 3.7e-22 2
RGD|1307942 - symbol:Ict1 "immature colon carcinoma trans... 222 3.7e-22 2
UNIPROTKB|B5XAM2 - symbol:ict1 "Peptidyl-tRNA hydrolase I... 256 5.5e-22 1
UNIPROTKB|Q14197 - symbol:ICT1 "Peptidyl-tRNA hydrolase I... 218 9.7e-22 2
UNIPROTKB|D2HD32 - symbol:ICT1 "Peptidyl-tRNA hydrolase I... 221 1.2e-21 2
UNIPROTKB|J3KS15 - symbol:ICT1 "Peptidyl-tRNA hydrolase I... 198 1.2e-19 2
UNIPROTKB|F1PFI7 - symbol:ICT1 "Uncharacterized protein" ... 223 1.7e-18 1
UNIPROTKB|J9P9L0 - symbol:ICT1 "Uncharacterized protein" ... 223 1.7e-18 1
TAIR|locus:2026217 - symbol:AT1G62850 species:3702 "Arabi... 221 2.8e-18 1
WB|WBGene00019838 - symbol:R02F2.9 species:6239 "Caenorha... 220 3.6e-18 1
DICTYBASE|DDB_G0272142 - symbol:DDB_G0272142 "prokaryotic... 174 2.7e-13 1
UNIPROTKB|P40711 - symbol:arfB "peptidyl-tRNA hydrolase, ... 164 3.1e-12 1
UNIPROTKB|Q83E98 - symbol:CBU_0429 "Peptidyl-tRNA hydrola... 161 6.4e-12 1
TIGR_CMR|CBU_0429 - symbol:CBU_0429 "peptidyl-tRNA hydrol... 161 6.4e-12 1
UNIPROTKB|Q0BYR4 - symbol:HNE_2699 "Peptidyl-tRNA hydrola... 151 7.4e-11 1
UNIPROTKB|Q47VX3 - symbol:CPS_4400 "Peptidyl-tRNA hydrola... 140 1.1e-09 1
TIGR_CMR|CPS_4400 - symbol:CPS_4400 "peptidyl-tRNA hydrol... 140 1.1e-09 1
UNIPROTKB|Q5LWS3 - symbol:SPO0127 "Peptidyl-tRNA hydrolas... 136 2.9e-09 1
TIGR_CMR|SPO_0127 - symbol:SPO_0127 "peptidyl-tRNA hydrol... 136 2.9e-09 1
POMBASE|SPAC589.11 - symbol:mug82 "mitochondrial translat... 126 1.9e-07 1
UNIPROTKB|Q8EJF4 - symbol:yaeJ "Stop codon-independent pe... 118 2.3e-07 1
TIGR_CMR|SO_0513 - symbol:SO_0513 "prokaryotic and mitoch... 118 2.3e-07 1
CGD|CAL0005616 - symbol:orf19.425 species:5476 "Candida a... 115 1.9e-05 1
UNIPROTKB|Q5A2B6 - symbol:CaO19.425 "Putative uncharacter... 115 1.9e-05 1
SGD|S000005474 - symbol:YOL114C "Putative protein of unkn... 106 0.00034 1
UNIPROTKB|Q74EJ1 - symbol:GSU0971 "Hydrolase, putative" s... 73 0.00062 2
TIGR_CMR|GSU_0971 - symbol:GSU_0971 "peptidyl-tRNA hydrol... 73 0.00062 2
>FB|FBgn0032261 [details] [associations]
symbol:CG6094 species:7227 "Drosophila melanogaster"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 PROSITE:PS00745 EMBL:AE014134
GO:GO:0003747 GeneTree:ENSGT00390000013268 KO:K15033 OMA:NQADCLE
EMBL:AY060797 EMBL:AM294748 EMBL:AM294749 EMBL:AM294751
EMBL:AM294753 EMBL:AM294754 EMBL:AM294755 EMBL:AM294757
EMBL:AM294759 EMBL:FM245884 EMBL:FM245885 EMBL:FM245888
RefSeq:NP_609416.1 UniGene:Dm.28245 SMR:Q9VKU3 IntAct:Q9VKU3
MINT:MINT-1642457 STRING:Q9VKU3 EnsemblMetazoa:FBtr0080091
GeneID:34446 KEGG:dme:Dmel_CG6094 UCSC:CG6094-RA
FlyBase:FBgn0032261 InParanoid:Q9VKU3 OrthoDB:EOG4RV17J
GenomeRNAi:34446 NextBio:788543 Uniprot:Q9VKU3
Length = 203
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 70/141 (49%), Positives = 96/141 (68%)
Query: 52 GLKFNGVIPVKAPDGL-KFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVD 110
G + P P G KF+G IP+ + L+ITYSRSSGPGGQHVN+V+TKVD
Sbjct: 43 GARLQIYTPPPPPSGSDKFSGFIPM---------DRLEITYSRSSGPGGQHVNTVNTKVD 93
Query: 111 IRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI-- 168
+RFKV A+W+ E +++L+++ NR+ KDGY IKSD TRSQQ+NLADA+ LR +I
Sbjct: 94 VRFKVAQADWIPEQTRQKLLKVLANRITKDGYFYIKSDLTRSQQMNLADALEKLRTIIRS 153
Query: 169 WKAAKPAPQISEDTIDRIRIR 189
+A PAP SE+T++++R R
Sbjct: 154 QEAVAPAPP-SEETLEKLRRR 173
>UNIPROTKB|Q3T116 [details] [associations]
symbol:ICT1 "Peptidyl-tRNA hydrolase ICT1, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0004045 "aminoacyl-tRNA hydrolase activity" evidence=ISS]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS]
[GO:0016150 "translation release factor activity, codon
nonspecific" evidence=ISS] [GO:0070126 "mitochondrial translational
termination" evidence=ISS] InterPro:IPR000352 Pfam:PF00472
PROSITE:PS00745 GO:GO:0005762 eggNOG:COG1186 GO:GO:0004045 CTD:3396
GeneTree:ENSGT00390000013268 HOGENOM:HOG000231063 KO:K15033
OMA:RCLRWGL GO:GO:0016150 GO:GO:0070126 EMBL:BC102162 EMBL:BC134736
IPI:IPI00707332 IPI:IPI00871111 RefSeq:NP_001029665.1
UniGene:Bt.49175 ProteinModelPortal:Q3T116 SMR:Q3T116 STRING:Q3T116
Ensembl:ENSBTAT00000004276 GeneID:515465 KEGG:bta:515465
HOVERGEN:HBG006115 InParanoid:Q3T116 OrthoDB:EOG4ZCT5J
NextBio:20871835 Uniprot:Q3T116
Length = 206
Score = 226 (84.6 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 45/106 (42%), Positives = 77/106 (72%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +KN++N+ G LI
Sbjct: 75 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKMALTHKNKINRAGELI 134
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQIS-EDT-IDRIRI 188
+ S+ +R Q NLAD + +R+MI +A++PA + S ED + ++RI
Sbjct: 135 LTSEYSRYQFRNLADCLQKIRDMIAEASQPATEPSKEDAALQKLRI 180
Score = 51 (23.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 15 RNVVKRFYKSSISLDKLYPNS 35
R V ++S+ SLDKLYP S
Sbjct: 32 RQVEGTEFRSAYSLDKLYPES 52
>MGI|MGI:1915822 [details] [associations]
symbol:Ict1 "immature colon carcinoma transcript 1"
species:10090 "Mus musculus" [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0016150
"translation release factor activity, codon nonspecific"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0070126 "mitochondrial translational termination" evidence=ISO]
InterPro:IPR000352 Pfam:PF00472 PROSITE:PS00745 MGI:MGI:1915822
EMBL:CH466558 GO:GO:0005762 eggNOG:COG1186 GO:GO:0004045
EMBL:AL627096 EMBL:AL603828 CTD:3396 GeneTree:ENSGT00390000013268
HOGENOM:HOG000231063 KO:K15033 OMA:RCLRWGL GO:GO:0016150
GO:GO:0070126 HOVERGEN:HBG006115 OrthoDB:EOG4ZCT5J EMBL:AK003192
EMBL:AK003286 EMBL:AK160697 EMBL:BC028523 IPI:IPI00380339
IPI:IPI00608050 RefSeq:NP_081005.1 UniGene:Mm.271062 PDB:1J26
PDBsum:1J26 ProteinModelPortal:Q8R035 SMR:Q8R035 STRING:Q8R035
PhosphoSite:Q8R035 PaxDb:Q8R035 PRIDE:Q8R035
Ensembl:ENSMUST00000103036 Ensembl:ENSMUST00000153983 GeneID:68572
KEGG:mmu:68572 UCSC:uc007mhj.1 UCSC:uc007mhl.1 InParanoid:A2A6T2
EvolutionaryTrace:Q8R035 NextBio:327482 Bgee:Q8R035 CleanEx:MM_ICT1
Genevestigator:Q8R035 GermOnline:ENSMUSG00000018858 Uniprot:Q8R035
Length = 206
Score = 225 (84.3 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 46/111 (41%), Positives = 77/111 (69%)
Query: 81 SYIT-EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
SYI + L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +KN++NK
Sbjct: 70 SYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINK 129
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
G L++ S+ +R Q NLA+ + +R+MI +A++ P ED + R+RI
Sbjct: 130 AGELVLTSESSRYQFRNLAECLQKIRDMIAEASQVPKEPSKEDARLQRLRI 180
Score = 47 (21.6 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 15 RNVVKRFYKSSISLDKLYPNS 35
R V ++S SLDKLYP S
Sbjct: 32 RQVDGTTFQSIYSLDKLYPES 52
>UNIPROTKB|F1NND9 [details] [associations]
symbol:ICT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004045 "aminoacyl-tRNA hydrolase activity"
evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA] [GO:0016150 "translation release factor activity,
codon nonspecific" evidence=IEA] [GO:0070126 "mitochondrial
translational termination" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 GO:GO:0005762 GO:GO:0004045
GeneTree:ENSGT00390000013268 OMA:RCLRWGL GO:GO:0016150
GO:GO:0070126 EMBL:AADN02053646 IPI:IPI00571510
Ensembl:ENSGALT00000012698 Uniprot:F1NND9
Length = 199
Score = 223 (83.6 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 40/110 (36%), Positives = 75/110 (68%)
Query: 80 FSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNK 139
F+ + L ++YSRSSGPGGQ+VN V+TK ++RF + +A+W+ E V++++ +++N++N+
Sbjct: 63 FNIPMDRLTVSYSRSSGPGGQNVNKVNTKAEVRFHLASADWIPEAVREKMASMHRNKINR 122
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRIRIR 189
G LI+ S+ +R Q NLA + +R M+ +A + +S++T ++ R
Sbjct: 123 AGELIVNSEESRYQMRNLAICLEKIRVMVTEATEKPKVVSKETAQQLIAR 172
Score = 49 (22.3 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 13 NQRNVVKRFYKSSISLDKLYP 33
+QR ++S+ SLDKLYP
Sbjct: 25 SQRAATGSEFRSAYSLDKLYP 45
>RGD|1307942 [details] [associations]
symbol:Ict1 "immature colon carcinoma transcript 1"
species:10116 "Rattus norvegicus" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA;ISO] [GO:0016150 "translation release factor activity,
codon nonspecific" evidence=IEA;ISO] [GO:0070126 "mitochondrial
translational termination" evidence=IEA;ISO] InterPro:IPR000352
Pfam:PF00472 RGD:1307942 GO:GO:0005762 GO:GO:0004045 CTD:3396
GeneTree:ENSGT00390000013268 KO:K15033 OMA:RCLRWGL GO:GO:0016150
GO:GO:0070126 OrthoDB:EOG4ZCT5J IPI:IPI00361525
RefSeq:NP_001178585.1 UniGene:Rn.22728 ProteinModelPortal:D3ZDP2
PRIDE:D3ZDP2 Ensembl:ENSRNOT00000045875 GeneID:303673
KEGG:rno:303673 NextBio:651865 Uniprot:D3ZDP2
Length = 206
Score = 222 (83.2 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 44/106 (41%), Positives = 74/106 (69%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + +A+W+ E V++++ +KN++NK G L+
Sbjct: 75 DRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELV 134
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
+ S+ +R Q NLA+ + +R+MI KA++ P ED + R+RI
Sbjct: 135 LTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRI 180
Score = 50 (22.7 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 22 YKSSISLDKLYPNS 35
+KS SLDKLYP S
Sbjct: 39 FKSIYSLDKLYPES 52
>UNIPROTKB|B5XAM2 [details] [associations]
symbol:ict1 "Peptidyl-tRNA hydrolase ICT1, mitochondrial"
species:8030 "Salmo salar" [GO:0004045 "aminoacyl-tRNA hydrolase
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS]
[GO:0016150 "translation release factor activity, codon
nonspecific" evidence=ISS] [GO:0070126 "mitochondrial translational
termination" evidence=ISS] InterPro:IPR000352 Pfam:PF00472
PROSITE:PS00745 GO:GO:0005762 GO:GO:0004045 CTD:3396 GO:GO:0016150
GO:GO:0070126 EMBL:BT048091 RefSeq:NP_001134526.1 UniGene:Ssa.24236
ProteinModelPortal:B5XAM2 GeneID:100196025 HOVERGEN:HBG105271
Uniprot:B5XAM2
Length = 191
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 49/98 (50%), Positives = 72/98 (73%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L ++YSRSSGPGGQHVN VSTK ++RF V A+W+ EDV++++I NKNR+NK G L+
Sbjct: 60 DRLTVSYSRSSGPGGQHVNKVSTKAEVRFHVYTADWIPEDVRQKIILNNKNRINKAGELL 119
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAA-KPAPQISED 181
+ S+++RSQQ N+ D + + ++I KA KP +ED
Sbjct: 120 VTSEQSRSQQRNMGDCIQKISDIIAKATEKPHEPSAED 157
>UNIPROTKB|Q14197 [details] [associations]
symbol:ICT1 "Peptidyl-tRNA hydrolase ICT1, mitochondrial"
species:9606 "Homo sapiens" [GO:0070126 "mitochondrial
translational termination" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016150 "translation release
factor activity, codon nonspecific" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IDA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IDA]
InterPro:IPR000352 Pfam:PF00472 PROSITE:PS00745 GO:GO:0005762
EMBL:CH471099 eggNOG:COG1186 GO:GO:0004045 CTD:3396
HOGENOM:HOG000231063 KO:K15033 OMA:RCLRWGL GO:GO:0016150
GO:GO:0070126 HOVERGEN:HBG006115 OrthoDB:EOG4ZCT5J EMBL:X81788
EMBL:BT007111 EMBL:AK222553 EMBL:AK314138 EMBL:BC015335
IPI:IPI00029114 PIR:S63540 RefSeq:NP_001536.1 UniGene:Hs.407955
ProteinModelPortal:Q14197 SMR:Q14197 IntAct:Q14197 STRING:Q14197
PhosphoSite:Q14197 DMDM:6015033 PaxDb:Q14197 PRIDE:Q14197
DNASU:3396 Ensembl:ENST00000301585 GeneID:3396 KEGG:hsa:3396
UCSC:uc002jmm.3 GeneCards:GC17P073008 HGNC:HGNC:5359 HPA:HPA003634
MIM:603000 neXtProt:NX_Q14197 PharmGKB:PA29607 InParanoid:Q14197
PhylomeDB:Q14197 GenomeRNAi:3396 NextBio:13418 Bgee:Q14197
CleanEx:HS_ICT1 Genevestigator:Q14197 GermOnline:ENSG00000167862
Uniprot:Q14197
Length = 206
Score = 218 (81.8 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 45/106 (42%), Positives = 72/106 (67%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ +KN++N+ G LI
Sbjct: 75 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELI 134
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 135 LTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRI 180
Score = 50 (22.7 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 22 YKSSISLDKLYPNS 35
+KS SLDKLYP S
Sbjct: 39 FKSIYSLDKLYPES 52
>UNIPROTKB|D2HD32 [details] [associations]
symbol:ICT1 "Peptidyl-tRNA hydrolase ICT1, mitochondrial"
species:9646 "Ailuropoda melanoleuca" [GO:0004045 "aminoacyl-tRNA
hydrolase activity" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0016150 "translation release factor activity,
codon nonspecific" evidence=ISS] [GO:0070126 "mitochondrial
translational termination" evidence=ISS] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 GO:GO:0005762 GO:GO:0004045
EMBL:GL192703 RefSeq:XP_002919882.1 ProteinModelPortal:D2HD32
Ensembl:ENSAMET00000009987 GeneID:100466987 KEGG:aml:100466987
CTD:3396 GeneTree:ENSGT00390000013268 HOGENOM:HOG000231063
KO:K15033 OMA:RCLRWGL GO:GO:0016150 GO:GO:0070126 Uniprot:D2HD32
Length = 206
Score = 221 (82.9 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 45/106 (42%), Positives = 73/106 (68%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ ++KN++N+ G LI
Sbjct: 75 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKMAIMHKNKINRSGELI 134
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 135 LTSECSRYQFRNLADCLQKIRDMIAEASQTPKEPSKEDAALHRIRI 180
Score = 46 (21.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 22 YKSSISLDKLYPNS 35
++S SLDKLYP S
Sbjct: 39 FQSIYSLDKLYPES 52
>UNIPROTKB|J3KS15 [details] [associations]
symbol:ICT1 "Peptidyl-tRNA hydrolase ICT1, mitochondrial"
species:9606 "Homo sapiens" [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
GO:GO:0003747 HGNC:HGNC:5359 EMBL:AC087651 Ensembl:ENST00000584208
Uniprot:J3KS15
Length = 192
Score = 198 (74.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/113 (40%), Positives = 73/113 (64%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLI------EL-NKNRL 137
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ L +KN++
Sbjct: 75 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITFFICSLQHKNKI 134
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAK-PAPQISEDT-IDRIRI 188
N+ G LI+ S+ +R Q NLAD + +R+MI +A++ P ED + RIRI
Sbjct: 135 NRLGELILTSESSRYQFRNLADCLQKIRDMITEASQTPKEPTKEDVKLHRIRI 187
Score = 50 (22.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 22 YKSSISLDKLYPNS 35
+KS SLDKLYP S
Sbjct: 39 FKSIYSLDKLYPES 52
>UNIPROTKB|F1PFI7 [details] [associations]
symbol:ICT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070126 "mitochondrial translational
termination" evidence=IEA] [GO:0016150 "translation release factor
activity, codon nonspecific" evidence=IEA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 GO:GO:0005762 GO:GO:0004045
GeneTree:ENSGT00390000013268 OMA:RCLRWGL GO:GO:0016150
GO:GO:0070126 EMBL:AAEX03006302 EMBL:AAEX03006303
Ensembl:ENSCAFT00000007565 Uniprot:F1PFI7
Length = 152
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 46/106 (43%), Positives = 74/106 (69%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ ++N++NK G LI
Sbjct: 21 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHRNKINKSGELI 80
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQIS-EDTI-DRIRI 188
+ S+ +R Q NLAD + +R+MI KA++ A + S ED + R+RI
Sbjct: 81 LTSECSRYQFRNLADCLQKIRDMIAKASQTATEPSKEDALLHRLRI 126
>UNIPROTKB|J9P9L0 [details] [associations]
symbol:ICT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 GO:GO:0003747
GeneTree:ENSGT00390000013268 EMBL:AAEX03006302 EMBL:AAEX03006303
Ensembl:ENSCAFT00000048829 Uniprot:J9P9L0
Length = 151
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 46/106 (43%), Positives = 74/106 (69%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ L I+Y RSSGPGGQ+VN V++K ++RF + A W+ E V++++ ++N++NK G LI
Sbjct: 20 DRLTISYCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHRNKINKSGELI 79
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQIS-EDTI-DRIRI 188
+ S+ +R Q NLAD + +R+MI KA++ A + S ED + R+RI
Sbjct: 80 LTSECSRYQFRNLADCLQKIRDMIAKASQTATEPSKEDALLHRLRI 125
>TAIR|locus:2026217 [details] [associations]
symbol:AT1G62850 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006415
"translational termination" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG1186 GO:GO:0003747
HOGENOM:HOG000231063 KO:K15033 EMBL:BT002782 EMBL:BT004350
IPI:IPI00520904 RefSeq:NP_001077760.1 RefSeq:NP_001077761.1
UniGene:At.36213 UniGene:At.36215 ProteinModelPortal:Q84JF2
PaxDb:Q84JF2 PRIDE:Q84JF2 EnsemblPlants:AT1G62850.2
EnsemblPlants:AT1G62850.3 GeneID:842585 KEGG:ath:AT1G62850
TAIR:At1g62850 OMA:IIDAASY PhylomeDB:Q84JF2 ProtClustDB:CLSN2699059
Genevestigator:Q84JF2 Uniprot:Q84JF2
Length = 236
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 42/102 (41%), Positives = 71/102 (69%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLI 144
+ + + ++RS GPGGQ+VN ++TKVD+RF V A WL++ ++++++ KNR+NKDG L+
Sbjct: 102 DNVTLNFARSGGPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELV 161
Query: 145 IKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDRI 186
I S +TR+Q+ N+ DA+ L+ +I A+ P SE+ +I
Sbjct: 162 ISSTKTRTQKGNIDDALEKLQAIIDAASYVPPPPSEEQKKKI 203
>WB|WBGene00019838 [details] [associations]
symbol:R02F2.9 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 GO:GO:0003747
GeneTree:ENSGT00390000013268 HOGENOM:HOG000231063 KO:K15033
OMA:RCLRWGL EMBL:FO081002 RefSeq:NP_498174.1
ProteinModelPortal:Q95QC2 SMR:Q95QC2 DIP:DIP-25298N
MINT:MINT-1081949 STRING:Q95QC2 PaxDb:Q95QC2 EnsemblMetazoa:R02F2.9
GeneID:259963 KEGG:cel:CELE_R02F2.9 UCSC:R02F2.9 CTD:259963
WormBase:R02F2.9 eggNOG:NOG121143 InParanoid:Q95QC2 NextBio:952720
Uniprot:Q95QC2
Length = 165
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 49/109 (44%), Positives = 69/109 (63%)
Query: 61 VKAPDGLKFNGVIPVVIPRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANW 120
++A FNGVIP TE+++ Y+ SSGPGGQ+V +TKV+IRFKV+ A W
Sbjct: 16 IQASSSATFNGVIP---------TEKIEKRYTLSSGPGGQNVQKNATKVEIRFKVSEAEW 66
Query: 121 LNEDVKKQLIELNKNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMIW 169
L+E ++ + E +R+N G LII SDRTR + LN+AD LR+ I+
Sbjct: 67 LSESLRDLVEEKLSHRINTAGELIIDSDRTRERHLNVADCFDKLRSAIY 115
>DICTYBASE|DDB_G0272142 [details] [associations]
symbol:DDB_G0272142 "prokaryotic/mitochondrial
release factor family protein" species:44689 "Dictyostelium
discoideum" [GO:0006415 "translational termination" evidence=IEA]
[GO:0003747 "translation release factor activity" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 PROSITE:PS00745
dictyBase:DDB_G0272142 EMBL:AAFI02000008 eggNOG:COG1186
GO:GO:0003747 KO:K15033 RefSeq:XP_645206.1
ProteinModelPortal:Q86JL2 STRING:Q86JL2 EnsemblProtists:DDB0168721
GeneID:8618379 KEGG:ddi:DDB_G0272142 InParanoid:Q86JL2 OMA:NINDAMD
Uniprot:Q86JL2
Length = 210
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 38/91 (41%), Positives = 57/91 (62%)
Query: 78 PRFSYITEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRL 137
P+ E+L++ +SRSSG GGQ+VN V+TKV++RF +N A+W+ VK +N +
Sbjct: 78 PKIIVPKEKLNLQFSRSSGAGGQNVNKVNTKVEVRFDLNKADWIPPYVK-----VNMRNV 132
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
N D II S + R Q LN+ DAM L +++
Sbjct: 133 NDDDEFIITSSKHRYQHLNINDAMDKLDDIL 163
>UNIPROTKB|P40711 [details] [associations]
symbol:arfB "peptidyl-tRNA hydrolase, ribosome rescue
factor" species:83333 "Escherichia coli K-12" [GO:0006415
"translational termination" evidence=IEA] [GO:0003747 "translation
release factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0072344 "rescue of stalled ribosome" evidence=IDA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=IEA;IDA]
InterPro:IPR000352 Pfam:PF00472 PROSITE:PS00745 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0043022 EMBL:D49445 EMBL:U70214
GO:GO:0072344 EMBL:L38619 EMBL:U18345 PIR:G64743 RefSeq:NP_414733.1
RefSeq:YP_488494.1 PDB:4DH9 PDBsum:4DH9 ProteinModelPortal:P40711
SMR:P40711 IntAct:P40711 PRIDE:P40711
EnsemblBacteria:EBESCT00000003139 EnsemblBacteria:EBESCT00000014361
GeneID:12934377 GeneID:946046 KEGG:ecj:Y75_p0188 KEGG:eco:b0191
PATRIC:32115495 EchoBASE:EB2258 EcoGene:EG12354 eggNOG:COG1186
HOGENOM:HOG000244440 KO:K15034 OMA:VLIIKAQ ProtClustDB:PRK09256
BioCyc:EcoCyc:EG12354-MONOMER BioCyc:ECOL316407:JW0187-MONOMER
BioCyc:MetaCyc:EG12354-MONOMER Genevestigator:P40711 GO:GO:0004045
GO:GO:0003747 Uniprot:P40711
Length = 140
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 38/95 (40%), Positives = 59/95 (62%)
Query: 75 VVIPRFSYITE-ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELN 133
+VI R I + EL+IT R+ G GGQHVN ST + +RF + A++ L E K++L+ +
Sbjct: 2 IVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASS-LPEYYKERLLAAS 60
Query: 134 KNRLNKDGYLIIKSDRTRSQQLNLADAMTTLRNMI 168
+ ++ DG ++IK+ RSQ+LN A+ L MI
Sbjct: 61 HHLISSDGVIVIKAQEYRSQELNREAALARLVAMI 95
>UNIPROTKB|Q83E98 [details] [associations]
symbol:CBU_0429 "Peptidyl-tRNA hydrolase family protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000352 Pfam:PF00472
GO:GO:0016787 EMBL:AE016828 GenomeReviews:AE016828_GR
HOGENOM:HOG000244440 KO:K15034 OMA:VLIIKAQ ProtClustDB:PRK09256
GO:GO:0003747 RefSeq:NP_819466.1 ProteinModelPortal:Q83E98
PRIDE:Q83E98 GeneID:1208313 KEGG:cbu:CBU_0429 PATRIC:17929545
BioCyc:CBUR227377:GJ7S-427-MONOMER Uniprot:Q83E98
Length = 131
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 35/90 (38%), Positives = 58/90 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+SGPGGQ VN ++T +RF V ++ L E++K++L+ + NR+N +G L+I
Sbjct: 8 EVEWRFIRASGPGGQKVNKIATAAQLRFNVPKSS-LPEEIKERLVAIAGNRINTEGELVI 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KP 174
R R+Q+ N DA+ L + + AA KP
Sbjct: 67 TGRRYRTQKQNRQDALERLIHFVKLAAQKP 96
>TIGR_CMR|CBU_0429 [details] [associations]
symbol:CBU_0429 "peptidyl-tRNA hydrolase domain protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=ISS] InterPro:IPR000352
Pfam:PF00472 GO:GO:0016787 EMBL:AE016828 GenomeReviews:AE016828_GR
HOGENOM:HOG000244440 KO:K15034 OMA:VLIIKAQ ProtClustDB:PRK09256
GO:GO:0003747 RefSeq:NP_819466.1 ProteinModelPortal:Q83E98
PRIDE:Q83E98 GeneID:1208313 KEGG:cbu:CBU_0429 PATRIC:17929545
BioCyc:CBUR227377:GJ7S-427-MONOMER Uniprot:Q83E98
Length = 131
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 35/90 (38%), Positives = 58/90 (64%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + R+SGPGGQ VN ++T +RF V ++ L E++K++L+ + NR+N +G L+I
Sbjct: 8 EVEWRFIRASGPGGQKVNKIATAAQLRFNVPKSS-LPEEIKERLVAIAGNRINTEGELVI 66
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAA-KP 174
R R+Q+ N DA+ L + + AA KP
Sbjct: 67 TGRRYRTQKQNRQDALERLIHFVKLAAQKP 96
>UNIPROTKB|Q0BYR4 [details] [associations]
symbol:HNE_2699 "Peptidyl-tRNA hydrolase domain protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000352 Pfam:PF00472
PROSITE:PS00745 GO:GO:0016787 eggNOG:COG1186 HOGENOM:HOG000244440
KO:K15034 OMA:VLIIKAQ GO:GO:0003747 EMBL:CP000158
GenomeReviews:CP000158_GR RefSeq:YP_761379.1
ProteinModelPortal:Q0BYR4 STRING:Q0BYR4 GeneID:4287049
KEGG:hne:HNE_2699 PATRIC:32218269
BioCyc:HNEP228405:GI69-2707-MONOMER Uniprot:Q0BYR4
Length = 144
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/89 (40%), Positives = 54/89 (60%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL + R+SGPGGQ+VN VS+ V + + V A++ L VK++ +L +R+ DG L++
Sbjct: 19 ELSEAFVRASGPGGQNVNKVSSAVQLTWHVQASS-LPAPVKERFAKLFASRITADGRLML 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKP 174
++ RSQ LN A L MI KA+ P
Sbjct: 78 EASEHRSQVLNRTAARERLAEMILKASVP 106
>UNIPROTKB|Q47VX3 [details] [associations]
symbol:CPS_4400 "Peptidyl-tRNA hydrolase domain protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000352 Pfam:PF00472
GO:GO:0016787 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG1186 HOGENOM:HOG000244440 KO:K15034 OMA:VLIIKAQ
GO:GO:0003747 RefSeq:YP_271049.1 ProteinModelPortal:Q47VX3
SMR:Q47VX3 STRING:Q47VX3 GeneID:3520540 KEGG:cps:CPS_4400
PATRIC:21471645 BioCyc:CPSY167879:GI48-4409-MONOMER Uniprot:Q47VX3
Length = 137
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ R+ G GGQ VN V+T + +RF + + L K++L+ +R+ KDG +II
Sbjct: 14 EIELSAIRAMGNGGQRVNKVATAIHLRFDIKRST-LPAIYKERLLASKDSRVTKDGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q++N DA+ L+ I
Sbjct: 73 KAQSFRTQEMNKEDALKRLKEFI 95
>TIGR_CMR|CPS_4400 [details] [associations]
symbol:CPS_4400 "peptidyl-tRNA hydrolase domain protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000352 Pfam:PF00472 GO:GO:0016787
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG1186
HOGENOM:HOG000244440 KO:K15034 OMA:VLIIKAQ GO:GO:0003747
RefSeq:YP_271049.1 ProteinModelPortal:Q47VX3 SMR:Q47VX3
STRING:Q47VX3 GeneID:3520540 KEGG:cps:CPS_4400 PATRIC:21471645
BioCyc:CPSY167879:GI48-4409-MONOMER Uniprot:Q47VX3
Length = 137
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++++ R+ G GGQ VN V+T + +RF + + L K++L+ +R+ KDG +II
Sbjct: 14 EIELSAIRAMGNGGQRVNKVATAIHLRFDIKRST-LPAIYKERLLASKDSRVTKDGVVII 72
Query: 146 KSDRTRSQQLNLADAMTTLRNMI 168
K+ R+Q++N DA+ L+ I
Sbjct: 73 KAQSFRTQEMNKEDALKRLKEFI 95
>UNIPROTKB|Q5LWS3 [details] [associations]
symbol:SPO0127 "Peptidyl-tRNA hydrolase domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000352 Pfam:PF00472
PROSITE:PS00745 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0016787 HOGENOM:HOG000244440 KO:K15034 OMA:VLIIKAQ
ProtClustDB:PRK09256 GO:GO:0003747 RefSeq:YP_165399.1
ProteinModelPortal:Q5LWS3 GeneID:3196191 KEGG:sil:SPO0127
PATRIC:23373499 Uniprot:Q5LWS3
Length = 139
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 37/106 (34%), Positives = 58/106 (54%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L VK +L L R +G +++
Sbjct: 14 ELSESFMRASGPGGQNVNKVSSAVELRFEAARSPSLPAPVKARLKRLAGRRWTGEGAIVL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQIS-EDTIDRIRIR 189
+ D TRSQ N L +I +A P +I+ + T +R R
Sbjct: 74 QCDETRSQARNREIVRARLVELIARALVAPKRRIATKPTRGSVRRR 119
>TIGR_CMR|SPO_0127 [details] [associations]
symbol:SPO_0127 "peptidyl-tRNA hydrolase domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008150
"biological_process" evidence=ND] [GO:0016788 "hydrolase activity,
acting on ester bonds" evidence=ISS] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 HOGENOM:HOG000244440
KO:K15034 OMA:VLIIKAQ ProtClustDB:PRK09256 GO:GO:0003747
RefSeq:YP_165399.1 ProteinModelPortal:Q5LWS3 GeneID:3196191
KEGG:sil:SPO0127 PATRIC:23373499 Uniprot:Q5LWS3
Length = 139
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 37/106 (34%), Positives = 58/106 (54%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
EL ++ R+SGPGGQ+VN VS+ V++RF+ + L VK +L L R +G +++
Sbjct: 14 ELSESFMRASGPGGQNVNKVSSAVELRFEAARSPSLPAPVKARLKRLAGRRWTGEGAIVL 73
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKA-AKPAPQIS-EDTIDRIRIR 189
+ D TRSQ N L +I +A P +I+ + T +R R
Sbjct: 74 QCDETRSQARNREIVRARLVELIARALVAPKRRIATKPTRGSVRRR 119
>POMBASE|SPAC589.11 [details] [associations]
symbol:mug82 "mitochondrial translation release factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003747
"translation release factor activity" evidence=ISM] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006415 "translational
termination" evidence=ISM] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000352 Pfam:PF00472 PROSITE:PS00745
PomBase:SPAC589.11 GO:GO:0005739 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0032543 eggNOG:COG1186
GO:GO:0003747 KO:K15033 RefSeq:NP_594059.1 HSSP:Q8R035
ProteinModelPortal:Q9HDZ3 STRING:Q9HDZ3 EnsemblFungi:SPAC589.11.1
GeneID:2541472 KEGG:spo:SPAC589.11 OMA:FANFRNC OrthoDB:EOG40312X
NextBio:20802571 Uniprot:Q9HDZ3
Length = 182
Score = 126 (49.4 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 38/111 (34%), Positives = 65/111 (58%)
Query: 85 EELDITYSRSSGPGGQHVNSVSTKV--DIRFKVNAA---NWLNEDVKKQLIELNKNRLNK 139
+++ I++SRSSGPGGQ+VN ++TKV ++ FK + +L K E+ +N +
Sbjct: 47 DQVQISFSRSSGPGGQNVNKLNTKVIVNLPFKQLESCIPMFLINHFKT--CEMLRNYRIQ 104
Query: 140 DGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKP--APQISEDTIDRIRI 188
+G + I S +TRSQ N+ DA+ + +++ K+A+ P + I RI I
Sbjct: 105 NG-IKIYSQKTRSQHKNIEDALNKISDLLNKSAETLYVPDTPPEKIARISI 154
>UNIPROTKB|Q8EJF4 [details] [associations]
symbol:yaeJ "Stop codon-independent peptidyl-tRNA
hydrolyzing factor YaeJ" species:211586 "Shewanella oneidensis
MR-1" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000244440 KO:K15034
OMA:VLIIKAQ ProtClustDB:PRK09256 GO:GO:0003747 RefSeq:NP_716149.2
ProteinModelPortal:Q8EJF4 GeneID:1168384 KEGG:son:SO_0513
PATRIC:23520711 Uniprot:Q8EJF4
Length = 142
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + RSSG GGQ+VN VST + F + ++ L E +++L++ +R+ G +II
Sbjct: 19 EIEWQFIRSSGAGGQNVNKVSTAAQLIFDIKNSS-LPEFYQQRLLQKADHRITASGKIII 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPA 175
K +RSQ N A+ ++ A A
Sbjct: 78 KCQASRSQDANRQTALVQFIALVASVADVA 107
>TIGR_CMR|SO_0513 [details] [associations]
symbol:SO_0513 "prokaryotic and mitochondrial release
factors family protein" species:211586 "Shewanella oneidensis MR-1"
[GO:0008150 "biological_process" evidence=ND] [GO:0003747
"translation release factor activity" evidence=ISS]
InterPro:IPR000352 Pfam:PF00472 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000244440 KO:K15034
OMA:VLIIKAQ ProtClustDB:PRK09256 GO:GO:0003747 RefSeq:NP_716149.2
ProteinModelPortal:Q8EJF4 GeneID:1168384 KEGG:son:SO_0513
PATRIC:23520711 Uniprot:Q8EJF4
Length = 142
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIRFKVNAANWLNEDVKKQLIELNKNRLNKDGYLII 145
E++ + RSSG GGQ+VN VST + F + ++ L E +++L++ +R+ G +II
Sbjct: 19 EIEWQFIRSSGAGGQNVNKVSTAAQLIFDIKNSS-LPEFYQQRLLQKADHRITASGKIII 77
Query: 146 KSDRTRSQQLNLADAMTTLRNMIWKAAKPA 175
K +RSQ N A+ ++ A A
Sbjct: 78 KCQASRSQDANRQTALVQFIALVASVADVA 107
>CGD|CAL0005616 [details] [associations]
symbol:orf19.425 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000352 Pfam:PF00472
CGD:CAL0005616 eggNOG:COG1186 GO:GO:0003747 KO:K15033
EMBL:AACQ01000078 EMBL:AACQ01000077 HOGENOM:HOG000246587
RefSeq:XP_715860.1 RefSeq:XP_715910.1 ProteinModelPortal:Q5A2B6
GeneID:3642446 GeneID:3642478 KEGG:cal:CaO19.425
KEGG:cal:CaO19.8055 Uniprot:Q5A2B6
Length = 197
Score = 115 (45.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/104 (30%), Positives = 50/104 (48%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNA------ANWLNEDVKKQLIELNKNRL 137
T DI+YSRSSGPGGQ VN S+K + + W+ + ++ QL
Sbjct: 58 THLFDISYSRSSGPGGQKVNKTSSKATVSLEPGLWLDPRICFWIPQPIQAQLKSKGIRYE 117
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED 181
K G L+I+SD +R+++ N L I A ++S++
Sbjct: 118 TKGGGLLIQSDTSRNREHNTELCFQRLVEEIKSKVYFASEVSQE 161
>UNIPROTKB|Q5A2B6 [details] [associations]
symbol:CaO19.425 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000352 Pfam:PF00472
CGD:CAL0005616 eggNOG:COG1186 GO:GO:0003747 KO:K15033
EMBL:AACQ01000078 EMBL:AACQ01000077 HOGENOM:HOG000246587
RefSeq:XP_715860.1 RefSeq:XP_715910.1 ProteinModelPortal:Q5A2B6
GeneID:3642446 GeneID:3642478 KEGG:cal:CaO19.425
KEGG:cal:CaO19.8055 Uniprot:Q5A2B6
Length = 197
Score = 115 (45.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/104 (30%), Positives = 50/104 (48%)
Query: 84 TEELDITYSRSSGPGGQHVNSVSTKVDIRFKVNA------ANWLNEDVKKQLIELNKNRL 137
T DI+YSRSSGPGGQ VN S+K + + W+ + ++ QL
Sbjct: 58 THLFDISYSRSSGPGGQKVNKTSSKATVSLEPGLWLDPRICFWIPQPIQAQLKSKGIRYE 117
Query: 138 NKDGYLIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISED 181
K G L+I+SD +R+++ N L I A ++S++
Sbjct: 118 TKGGGLLIQSDTSRNREHNTELCFQRLVEEIKSKVYFASEVSQE 161
>SGD|S000005474 [details] [associations]
symbol:YOL114C "Putative protein of unknown function with
similarity to human ICT1" species:4932 "Saccharomyces cerevisiae"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006415 "translational termination" evidence=IEA]
[GO:0003747 "translation release factor activity" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 SGD:S000005474 EMBL:BK006948
eggNOG:COG1186 GO:GO:0003747 EMBL:Z48149
GeneTree:ENSGT00390000013268 KO:K15033 OrthoDB:EOG40312X
EMBL:Z74856 EMBL:AY558007 PIR:S51883 RefSeq:NP_014527.1
ProteinModelPortal:Q12322 SMR:Q12322 IntAct:Q12322 STRING:Q12322
PRIDE:Q12322 EnsemblFungi:YOL114C GeneID:854035 KEGG:sce:YOL114C
CYGD:YOL114c HOGENOM:HOG000246587 OMA:NQADCLE NextBio:975592
Genevestigator:Q12322 GermOnline:YOL114C Uniprot:Q12322
Length = 202
Score = 106 (42.4 bits), Expect = 0.00034, P = 0.00034
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 89 ITYSRSSGPGGQHVNSVSTKVDIRFK-VNAANWLNEDVKKQLIELNKNRLNKDGY--LII 145
+ Y R+SGPGGQ+VN V++K + ++ W+ ++V+ ++ + R G ++I
Sbjct: 71 LRYDRASGPGGQNVNKVNSKCTLTLSGLSNCAWIPQEVRN-ILSSGRFRYYAKGSDSIVI 129
Query: 146 KSDRTRSQQLN 156
+SD TRS++ N
Sbjct: 130 QSDETRSRETN 140
>UNIPROTKB|Q74EJ1 [details] [associations]
symbol:GSU0971 "Hydrolase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 73 (30.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIR 112
++ + Y R+SGPGGQH N+ + V IR
Sbjct: 9 DIKVEYYRASGPGGQHRNTTDSAVRIR 35
Score = 48 (22.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDR 185
+++++ +RSQ N AM LR + K + A + T+ R
Sbjct: 41 IVVQASESRSQAQNREKAMERLRIALEKRERKAKKRIATTVPR 83
>TIGR_CMR|GSU_0971 [details] [associations]
symbol:GSU_0971 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 73 (30.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 86 ELDITYSRSSGPGGQHVNSVSTKVDIR 112
++ + Y R+SGPGGQH N+ + V IR
Sbjct: 9 DIKVEYYRASGPGGQHRNTTDSAVRIR 35
Score = 48 (22.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 143 LIIKSDRTRSQQLNLADAMTTLRNMIWKAAKPAPQISEDTIDR 185
+++++ +RSQ N AM LR + K + A + T+ R
Sbjct: 41 IVVQASESRSQAQNREKAMERLRIALEKRERKAKKRIATTVPR 83
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 189 189 0.00089 110 3 11 22 0.47 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 576 (61 KB)
Total size of DFA: 144 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.22u 0.15s 20.37t Elapsed: 00:00:01
Total cpu time: 20.22u 0.15s 20.37t Elapsed: 00:00:01
Start: Thu Aug 15 10:53:39 2013 End: Thu Aug 15 10:53:40 2013