BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14433
(144 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3T013|BNI3L_BOVIN BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
OS=Bos taurus GN=BNIP3L PE=2 SV=1
Length = 219
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 21 NTELSTEDDHLKGVYINFANKDELVANFDKSTDWIWDWSSRPDQAPPKDWKFRHPK-SKS 79
+ E+ T DH A ++ V KS DW+ DWSSRP+ PPK++ FRHPK S S
Sbjct: 107 DVEMHTSKDHSSQSEEEVAEGEKEVDALKKSVDWVSDWSSRPENIPPKEFHFRHPKRSVS 166
Query: 80 YSMRYA-KVGKNSLFSKEVMYTLFVTNIISILLGTGVGMWLSRR 122
SMR + + K +FS E + + +S +L G+G+++ +R
Sbjct: 167 LSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIYIGKR 210
>sp|O60238|BNI3L_HUMAN BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
OS=Homo sapiens GN=BNIP3L PE=1 SV=1
Length = 219
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 21 NTELSTEDDHLKGVYINFANKDELVANFDKSTDWIWDWSSRPDQAPPKDWKFRHPK-SKS 79
+ E+ T DH ++ V KS DW+ DWSSRP+ PPK++ FRHPK S S
Sbjct: 107 DVEMHTSRDHSSQSEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRHPKRSVS 166
Query: 80 YSMRYA-KVGKNSLFSKEVMYTLFVTNIISILLGTGVGMWLSRR 122
SMR + + K +FS E + + +S +L G+G+++ +R
Sbjct: 167 LSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIYIGKR 210
>sp|Q9Z2F7|BNI3L_MOUSE BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like
OS=Mus musculus GN=Bnip3l PE=1 SV=1
Length = 218
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 21 NTELSTEDDHLKGVYINFANKDELVANFDKSTDWIWDWSSRPDQAPPKDWKFRHPK-SKS 79
+ E+ T DH ++ V KS DW+ DWSSRP+ PPK++ FRHPK + S
Sbjct: 106 DVEMHTSRDHSSQSEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRHPKRAAS 165
Query: 80 YSMRYA-KVGKNSLFSKEVMYTLFVTNIISILLGTGVGMWLSRR 122
SMR + + K +FS E + + +S +L G+G+++ +R
Sbjct: 166 LSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIYIGKR 209
>sp|Q12983|BNIP3_HUMAN BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 OS=Homo
sapiens GN=BNIP3 PE=1 SV=2
Length = 194
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 10/104 (9%)
Query: 21 NTELSTEDDHLKGVYINFANKDELVANFDKSTDWIWDWSSRPDQAPPKDWKFRHPK-SKS 79
N+ S EDD + E+ + K++DWIWDWSSRP+ PPK++ F+HPK + +
Sbjct: 91 NSSQSEEDD--------IERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFKHPKRTAT 142
Query: 80 YSMRYAKV-GKNSLFSKEVMYTLFVTNIISILLGTGVGMWLSRR 122
SMR V K +FS E + + ++S LL G+G+++ RR
Sbjct: 143 LSMRNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLGIYIGRR 186
>sp|O55003|BNIP3_MOUSE BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 OS=Mus
musculus GN=Bnip3 PE=1 SV=1
Length = 187
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Query: 21 NTELSTEDDHLKGVYINFANKDELVANFDKSTDWIWDWSSRPDQAPPKDWKFRHPK-SKS 79
N+ LS ED YI + E+ + K++DWIWDWSSRP+ PPK++ F+HPK + +
Sbjct: 84 NSTLSEED------YIE--RRREVESILKKNSDWIWDWSSRPENIPPKEFLFKHPKRTAT 135
Query: 80 YSMRYAKV-GKNSLFSKEVMYTLFVTNIISILLGTGVGMWLSRR 122
SMR V K +FS + + + ++S LL G+G+++ RR
Sbjct: 136 LSMRNTSVMKKGGIFSADFLKVFLPSLLLSHLLAIGLGIYIGRR 179
>sp|Q09969|BNIP3_CAEEL NIP3 homolog OS=Caenorhabditis elegans GN=dct-1 PE=1 SV=2
Length = 221
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 50 KSTDWIWDWSSRPDQAPPKDWKFRH-----------PKSKSYSMRYAKVGKNSLFSKEVM 98
K+TDWIWDWSSRP+ PPK + P+ + Y +Y +SLF+ V+
Sbjct: 133 KNTDWIWDWSSRPENTPPKTVRMVQYGSNLTTPPNSPEPELY--QYLPCESDSLFNVRVV 190
Query: 99 YTLFVTNIISILLGTGVGMWLSRR 122
+ VTNI S ++G VG + R+
Sbjct: 191 FGFLVTNIFSFVVGAAVGFAVCRK 214
>sp|A8XPY4|BNIP3_CAEBR BNIP3 homolog OS=Caenorhabditis briggsae GN=dct-1 PE=3 SV=2
Length = 220
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 50 KSTDWIWDWSSRPDQAPPKDWKFRH--------PKSKSYSM-RYAKVGKNSLFSKEVMYT 100
K+TDW+WDWSSRP+ PPK + P S M +Y +SLF+ V++
Sbjct: 131 KNTDWMWDWSSRPENTPPKTIRMVQYGSNLTTPPNSPEPEMSQYMPYESDSLFNVRVVFG 190
Query: 101 LFVTNIISILLGTGVGMWLSRR 122
VTNI S ++G VG + R+
Sbjct: 191 FLVTNIFSFVVGAAVGFAVCRK 212
>sp|Q32KN2|BNIP3_BOVIN BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 OS=Bos
taurus GN=BNIP3 PE=2 SV=1
Length = 196
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 41 KDELVANFDKSTDWIWDWSSRPDQAPPKD--WKFRHPK-SKSYSMRYAKV-GKNSLFSKE 96
+ E+ + K++DWIWDWSSRP+ PP F+HPK + + SMR V K +FS E
Sbjct: 103 RKEVESILKKNSDWIWDWSSRPENVPPAKEFLLFKHPKRTPTLSMRNTSVMKKGGIFSAE 162
Query: 97 VMYTLFVTNIISILLGTGVGMWLSRR 122
+ + ++S LL G+G+++ RR
Sbjct: 163 FLKVFLPSLLLSHLLAIGLGIYIGRR 188
>sp|P21264|PUR6_YEAST Phosphoribosylaminoimidazole carboxylase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ADE2 PE=1
SV=1
Length = 571
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 18 NSPNTELSTEDDHLKGVYINFANKDELVANFDKSTDWIWDWSSRPDQAPPKDWKFRHPKS 77
NSP ++S +DH+ G + N + ++L D T I D K+ + +HPK
Sbjct: 36 NSPAKQISNSNDHVNGSFSNPLDIEKLAEKCDVLTIEI----EHVDVPTLKNLQVKHPKL 91
Query: 78 KSY 80
K Y
Sbjct: 92 KIY 94
>sp|Q814U1|PRMC_BACCR Release factor glutamine methyltransferase OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=prmC PE=3 SV=1
Length = 283
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 21 NTELSTEDDHLKGVYINFANKDELVANFDKSTDWIWDWSSRPDQAPPKDWKFRHPKSKSY 80
+ E++ E+ G + F + D L++ F K+ + S P P +DW+ P K +
Sbjct: 149 SIEVAKENAKALGAEVTFYHGD-LLSPFHKTGQKLDVVVSNPPYIPEEDWRGLSPVVKEH 207
Query: 81 SMRYAKV-GKNSL-----FSKEVMYTLFVTNIISILLGTGVGMWLSR 121
+ A V G++ L F +E+ L I++ +G G G + R
Sbjct: 208 EPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKR 254
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,669,797
Number of Sequences: 539616
Number of extensions: 2180848
Number of successful extensions: 5419
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5402
Number of HSP's gapped (non-prelim): 12
length of query: 144
length of database: 191,569,459
effective HSP length: 106
effective length of query: 38
effective length of database: 134,370,163
effective search space: 5106066194
effective search space used: 5106066194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)