RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14436
(133 letters)
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1,
KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 64.9 bits (156), Expect = 4e-14
Identities = 37/83 (44%), Positives = 45/83 (54%)
Query: 7 HGYRELQLQVSVERFDPKLNRWTAMAPMSTRRKHLGCAVFNNVIYAVGGRDDSMELSSAE 66
GY SVER+D + WT +APM RR LG V IY +GG D L S E
Sbjct: 202 GGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVE 261
Query: 67 KYNPHTNTWLPIVAMTSRRSGLG 89
Y+P T+TW + MTS RSG+G
Sbjct: 262 CYDPDTDTWSEVTRMTSGRSGVG 284
Score = 52.2 bits (123), Expect = 1e-09
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 17 SVERFDPKLNRWTAMAPMSTRRKHLGCAVFNNVIYAVGGRDDSMELSSAEKYNPHTNTW 75
+E ++P W +A + R L V ++YAVGGR++S + ++ N
Sbjct: 20 YLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 78
Score = 41.8 bits (96), Expect = 7e-06
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 48 NVIYAVGGRDDSMELSSAEKYNPHTNTWLPIVAMTSRRSGLG 89
+IY GG LS E YNP TWL + + RSGL
Sbjct: 5 RLIYTAGGYFRQ-SLSYLEAYNPSNGTWLRLADLQVPRSGLA 45
Score = 41.4 bits (95), Expect = 7e-06
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 8 GYRELQLQVSVERFDPKLNRWTAMAPMSTRRKHLGCAV 45
GY SVE +DP + W+ + M++ R +G AV
Sbjct: 250 GYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 287
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain
{Fungi (Fusarium sp.) [TaxId: 29916]}
Length = 387
Score = 54.4 bits (129), Expect = 3e-10
Identities = 8/79 (10%), Positives = 18/79 (22%), Gaps = 6/79 (7%)
Query: 23 PKLNRWTAMAPMSTRRKHLGCAVFNNVIYAVGGRDDSME------LSSAEKYNPHTNTWL 76
P L RW + + + + ++ ++P T
Sbjct: 6 PGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS 65
Query: 77 PIVAMTSRRSGLGPGSLQL 95
++ PG
Sbjct: 66 DRTVTVTKHDMFCPGISMD 84
Score = 49.4 bits (116), Expect = 1e-08
Identities = 10/60 (16%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 17 SVERFDPKLNRWTAMAPMSTRRKHLGCAVF--NNVIYAVGGR---DDSMELSSAEKYNPH 71
+ E + P+ + + P S R + ++ + ++ GG D + A+ + P+
Sbjct: 322 TPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPN 381
Score = 40.6 bits (93), Expect = 2e-05
Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 7/69 (10%)
Query: 26 NRWTAMAPMSTRRKHLGCAVFNN-VIYAVGGR------DDSMELSSAEKYNPHTNTWLPI 78
N A + R V + + GG+ +DS + + E Y P +T+
Sbjct: 277 NTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQ 336
Query: 79 VAMTSRRSG 87
+ R
Sbjct: 337 NPNSIVRVY 345
Score = 40.6 bits (93), Expect = 2e-05
Identities = 13/77 (16%), Positives = 22/77 (28%), Gaps = 7/77 (9%)
Query: 17 SVERFDPKLNRWTAMAPMSTRRKHLGCAV---FNNVIYAVGGRDDSMELSSAEKYNPHTN 73
+DP + T+ + N I GG D Y+ ++
Sbjct: 53 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKK----TSLYDSSSD 108
Query: 74 TWLPIVAMTSRRSGLGP 90
+W+P M R
Sbjct: 109 SWIPGPDMQVARGYQSS 125
Score = 32.1 bits (71), Expect = 0.016
Identities = 11/98 (11%), Positives = 23/98 (23%), Gaps = 9/98 (9%)
Query: 1 MNEDFNHGYRELQLQVSVERFDPKLNRWTAMAPMST----RRKHLGCAVFNNVIYAVGGR 56
+ + + E + P WT++ G +N + G +
Sbjct: 132 RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWK 191
Query: 57 DDSME-----LSSAEKYNPHTNTWLPIVAMTSRRSGLG 89
S+ + Y + S R
Sbjct: 192 KGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP 229
>d2etsa1 a.24.26.1 (A:1-110) Hypothetical protein MW1337
{Staphylococcus aureus [TaxId: 1280]}
Length = 110
Score = 25.9 bits (57), Expect = 1.0
Identities = 10/55 (18%), Positives = 16/55 (29%), Gaps = 7/55 (12%)
Query: 18 VERFDPKLNRWTAMAPMSTRRKHLGCAVFNNVIYAVGGRDDSMELSSAEKYNPHT 72
E D LN ++ F +I ++E S E + T
Sbjct: 39 TEHIDSILNEIKLHREFIIEVPYMNSRKFELLI-------ANIEQLSVECHFKRT 86
>d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate
uridylyltransferase {Escherichia coli [TaxId: 562]}
Length = 176
Score = 25.4 bits (55), Expect = 2.1
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 20 RFDPKLNRWTAMAPMSTRRKHLG 42
R++P +W ++P +R G
Sbjct: 12 RYNPLTGQWILVSPHRAKRPWQG 34
>d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate
uridylyltransferase {Thale cress (Arabidopsis thaliana)
[TaxId: 3702]}
Length = 173
Score = 24.3 bits (52), Expect = 5.1
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 20 RFDPKLNRWTAMAPMSTRRKHLG 42
R DP NRW +P +R
Sbjct: 4 RKDPVTNRWVIFSPARAKRPTDF 26
>d2fnoa1 a.45.1.1 (A:88-236) Hypothetical protein
AGR_pAT_752p/Atu5508 {Agrobacterium tumefaciens [TaxId:
358]}
Length = 149
Score = 24.1 bits (52), Expect = 5.6
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 47 NNVIYAVGGRDDSMELSSAEK---YNPHTNTWLPIVAMTSRRSGLGPGS 92
N+V+ + + E+ + EK + P W+ I A T R+GL S
Sbjct: 19 NDVLDELT-LNGGREMWTPEKWQEFVPRLQKWIRIFADTGARNGLSAAS 66
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.417
Gapped
Lambda K H
0.267 0.0547 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 516,401
Number of extensions: 20822
Number of successful extensions: 63
Number of sequences better than 10.0: 1
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 16
Length of query: 133
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 57
Effective length of database: 1,364,116
Effective search space: 77754612
Effective search space used: 77754612
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.7 bits)