Query psy14437
Match_columns 160
No_of_seqs 96 out of 98
Neff 3.7
Searched_HMMs 46136
Date Fri Aug 16 19:49:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14437.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14437hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0612|consensus 99.5 5.5E-15 1.2E-19 145.8 1.3 65 10-79 1236-1300(1317)
2 cd01242 PH_ROK Rok (Rho- assoc 98.3 2.2E-07 4.8E-12 71.7 1.0 36 34-70 75-112 (112)
3 KOG0612|consensus 98.2 5.9E-07 1.3E-11 90.1 2.9 63 90-158 1249-1316(1317)
4 cd01242 PH_ROK Rok (Rho- assoc 98.2 4.5E-07 9.8E-12 70.0 0.6 32 105-137 81-112 (112)
5 PF00169 PH: PH domain; Inter 79.4 0.95 2.1E-05 29.9 1.0 24 45-68 80-103 (104)
6 cd01220 PH_CDEP Chondrocyte-de 79.2 1.1 2.4E-05 33.1 1.3 28 42-69 71-98 (99)
7 cd01235 PH_SETbf Set binding f 78.3 1.2 2.5E-05 31.1 1.2 26 43-68 76-101 (101)
8 PF00169 PH: PH domain; Inter 74.5 1.9 4.1E-05 28.4 1.4 24 112-135 80-103 (104)
9 cd01266 PH_Gab Gab (Grb2-assoc 72.2 2 4.4E-05 31.3 1.2 24 43-66 83-106 (108)
10 cd01220 PH_CDEP Chondrocyte-de 72.0 2 4.3E-05 31.7 1.1 26 111-136 73-98 (99)
11 cd00029 C1 Protein kinase C co 69.9 2.1 4.5E-05 26.4 0.7 20 8-27 26-45 (50)
12 cd01219 PH_FGD FGD (faciogenit 69.8 2.9 6.3E-05 30.3 1.5 26 45-70 76-101 (101)
13 smart00109 C1 Protein kinase C 69.5 1.6 3.4E-05 26.6 0.1 19 9-27 26-44 (49)
14 cd01265 PH_PARIS-1 PARIS-1 ple 69.4 2.7 5.8E-05 30.2 1.3 33 34-67 61-93 (95)
15 cd01260 PH_CNK Connector enhan 67.8 3.9 8.5E-05 28.6 1.9 23 43-65 72-94 (96)
16 PF00130 C1_1: Phorbol esters/ 67.1 3.4 7.3E-05 26.3 1.3 28 6-36 24-51 (53)
17 cd01243 PH_MRCK MRCK (myotonic 67.0 2.9 6.2E-05 33.1 1.1 22 111-132 95-116 (122)
18 smart00233 PH Pleckstrin homol 66.5 3.8 8.2E-05 26.2 1.4 24 45-68 78-101 (102)
19 cd01235 PH_SETbf Set binding f 66.2 3.3 7.1E-05 28.8 1.2 25 111-135 77-101 (101)
20 cd01244 PH_RasGAP_CG9209 RAS_G 65.7 2.9 6.4E-05 30.9 0.9 23 44-66 75-97 (98)
21 cd01251 PH_centaurin_alpha Cen 65.4 3.8 8.2E-05 29.9 1.4 27 43-69 75-101 (103)
22 cd01252 PH_cytohesin Cytohesin 65.1 4.7 0.0001 29.9 1.9 24 48-71 93-116 (125)
23 cd01266 PH_Gab Gab (Grb2-assoc 64.6 3.6 7.7E-05 30.0 1.1 23 110-132 83-105 (108)
24 cd01260 PH_CNK Connector enhan 64.0 3.2 6.9E-05 29.1 0.8 22 111-132 73-94 (96)
25 cd01243 PH_MRCK MRCK (myotonic 64.0 3.2 6.8E-05 32.8 0.8 22 44-65 95-116 (122)
26 cd00821 PH Pleckstrin homology 63.1 3.8 8.3E-05 25.9 1.0 21 45-65 74-94 (96)
27 cd01219 PH_FGD FGD (faciogenit 62.2 4.8 0.0001 29.2 1.4 25 112-136 76-100 (101)
28 cd01222 PH_clg Clg (common-sit 61.5 6.3 0.00014 29.3 2.0 34 34-68 59-95 (97)
29 cd01225 PH_Cool_Pix Cool (clon 60.7 4.8 0.0001 31.3 1.3 24 113-136 87-110 (111)
30 cd01225 PH_Cool_Pix Cool (clon 60.5 4.8 0.0001 31.3 1.3 24 46-69 87-110 (111)
31 cd01221 PH_ephexin Ephexin Ple 60.4 3.2 7E-05 32.5 0.3 21 111-131 98-118 (125)
32 cd01244 PH_RasGAP_CG9209 RAS_G 60.3 3.6 7.8E-05 30.4 0.5 23 111-133 75-97 (98)
33 cd01265 PH_PARIS-1 PARIS-1 ple 60.3 4.9 0.00011 28.8 1.2 24 111-134 70-93 (95)
34 cd01238 PH_Tec Tec pleckstrin 58.5 5.2 0.00011 29.3 1.1 23 44-66 83-105 (106)
35 cd01221 PH_ephexin Ephexin Ple 58.5 3.9 8.5E-05 32.1 0.5 24 42-65 96-119 (125)
36 cd01250 PH_centaurin Centaurin 58.5 5.4 0.00012 26.8 1.1 21 45-65 72-92 (94)
37 cd01236 PH_outspread Outspread 57.9 5.1 0.00011 30.1 1.0 25 42-66 78-102 (104)
38 cd01218 PH_phafin2 Phafin2 Pl 57.8 6.3 0.00014 29.6 1.5 29 42-70 72-100 (104)
39 cd01236 PH_outspread Outspread 57.2 5.3 0.00011 30.0 1.0 23 111-133 80-102 (104)
40 cd01257 PH_IRS Insulin recepto 53.6 7.1 0.00015 29.0 1.2 21 112-132 79-99 (101)
41 cd01251 PH_centaurin_alpha Cen 53.3 7.9 0.00017 28.2 1.3 26 111-136 76-101 (103)
42 cd01250 PH_centaurin Centaurin 52.3 7.1 0.00015 26.3 0.9 21 112-132 72-92 (94)
43 cd01238 PH_Tec Tec pleckstrin 51.6 12 0.00025 27.4 2.0 22 112-133 84-105 (106)
44 PF10880 DUF2673: Protein of u 50.5 10 0.00022 26.9 1.4 19 114-132 33-51 (65)
45 cd01257 PH_IRS Insulin recepto 47.9 9.1 0.0002 28.4 0.9 22 44-65 78-99 (101)
46 cd01218 PH_phafin2 Phafin2 Pl 47.3 10 0.00022 28.5 1.1 26 111-136 74-99 (104)
47 cd01246 PH_oxysterol_bp Oxyste 46.5 11 0.00024 25.1 1.1 23 43-65 67-89 (91)
48 cd01254 PH_PLD Phospholipase D 43.6 11 0.00025 28.2 0.9 25 41-65 95-119 (121)
49 cd01252 PH_cytohesin Cytohesin 42.4 22 0.00048 26.3 2.3 23 115-137 93-115 (125)
50 cd01247 PH_GPBP Goodpasture an 41.7 11 0.00024 27.0 0.6 25 42-66 66-90 (91)
51 TIGR03504 FimV_Cterm FimV C-te 41.0 34 0.00074 22.1 2.7 29 107-135 14-44 (44)
52 cd01228 PH_BCR-related BCR (br 40.0 13 0.00029 28.3 0.8 28 107-134 66-93 (96)
53 PF15405 PH_5: Pleckstrin homo 38.7 18 0.00039 28.1 1.4 36 31-66 98-133 (135)
54 COG3965 Predicted Co/Zn/Cd cat 37.3 35 0.00076 30.8 3.1 35 42-77 218-252 (314)
55 cd00900 PH-like Pleckstrin hom 37.2 17 0.00037 23.1 0.9 23 44-66 76-98 (99)
56 cd01254 PH_PLD Phospholipase D 36.8 15 0.00033 27.5 0.7 25 108-132 95-119 (121)
57 cd01233 Unc104 Unc-104 pleckst 36.7 18 0.00039 26.0 1.0 24 43-66 73-96 (100)
58 cd01241 PH_Akt Akt pleckstrin 36.4 29 0.00064 25.1 2.1 20 48-67 82-101 (102)
59 cd01233 Unc104 Unc-104 pleckst 36.3 16 0.00036 26.2 0.8 22 111-132 74-95 (100)
60 COG3965 Predicted Co/Zn/Cd cat 36.1 39 0.00084 30.5 3.2 41 101-142 210-250 (314)
61 PF13831 PHD_2: PHD-finger; PD 36.1 10 0.00022 23.5 -0.3 20 8-27 2-21 (36)
62 PF15410 PH_9: Pleckstrin homo 35.2 17 0.00036 27.2 0.6 32 34-65 84-115 (119)
63 PF15413 PH_11: Pleckstrin hom 34.5 20 0.00042 26.6 0.9 26 41-66 86-111 (112)
64 cd01248 PH_PLC Phospholipase C 33.1 30 0.00065 25.4 1.7 21 45-65 93-113 (115)
65 cd01253 PH_beta_spectrin Beta- 31.7 25 0.00054 24.8 1.1 24 42-65 79-102 (104)
66 COG1860 Uncharacterized protei 31.4 18 0.00039 29.5 0.3 35 4-38 19-61 (147)
67 PF11939 DUF3457: Protein of u 31.2 16 0.00034 29.5 -0.0 36 1-38 20-55 (155)
68 cd01264 PH_melted Melted pleck 31.0 24 0.00051 26.5 0.9 24 110-133 76-99 (101)
69 PF15413 PH_11: Pleckstrin hom 30.8 23 0.00051 26.2 0.8 26 108-133 86-111 (112)
70 cd01230 PH_EFA6 EFA6 Pleckstri 30.5 24 0.00052 26.9 0.9 27 42-68 85-111 (117)
71 TIGR02753 sodN superoxide dism 30.3 23 0.0005 28.8 0.7 18 100-117 114-131 (145)
72 cd01228 PH_BCR-related BCR (br 30.1 26 0.00056 26.7 1.0 27 41-67 67-93 (96)
73 PF15409 PH_8: Pleckstrin homo 30.1 43 0.00093 24.8 2.1 32 34-66 56-87 (89)
74 cd01261 PH_SOS Son of Sevenles 28.8 36 0.00078 26.0 1.5 27 44-70 85-111 (112)
75 cd01261 PH_SOS Son of Sevenles 28.3 37 0.0008 25.9 1.6 26 112-137 86-111 (112)
76 PF15410 PH_9: Pleckstrin homo 27.3 28 0.00062 25.9 0.8 24 109-132 92-115 (119)
77 cd01264 PH_melted Melted pleck 27.1 30 0.00065 26.0 0.8 25 42-66 75-99 (101)
78 cd01230 PH_EFA6 EFA6 Pleckstri 26.9 27 0.00059 26.6 0.6 25 110-134 86-110 (117)
79 cd01232 PH_TRIO Trio pleckstri 26.9 65 0.0014 24.6 2.7 36 34-69 74-113 (114)
80 cd01224 PH_Collybistin Collybi 26.5 28 0.00061 26.8 0.6 23 44-66 83-105 (109)
81 PLN03207 stomagen; Provisional 23.5 33 0.00071 26.8 0.5 16 11-26 79-94 (113)
82 KOG3523|consensus 22.2 39 0.00084 33.5 0.8 31 101-132 561-591 (695)
83 PF15405 PH_5: Pleckstrin homo 21.4 79 0.0017 24.5 2.3 35 99-133 99-133 (135)
84 PF15408 PH_7: Pleckstrin homo 21.3 49 0.0011 25.4 1.0 23 44-66 73-95 (104)
85 PF15409 PH_8: Pleckstrin homo 21.1 80 0.0017 23.3 2.1 21 113-133 67-87 (89)
No 1
>KOG0612|consensus
Probab=99.49 E-value=5.5e-15 Score=145.78 Aligned_cols=65 Identities=52% Similarity=0.759 Sum_probs=62.4
Q ss_pred cccCccccccccccccccccccccCcccccCchhhhhHhhcCCChHHHHHHHHHHHHhHhhcCCCCCCCC
Q psy14437 10 NVTPIRCRIKVHKDHLNGKEEAIAPCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLSKKIQKCGYKANTLS 79 (160)
Q Consensus 10 a~ecrrC~~K~Hkdh~d~ke~~i~pCk~n~D~~~AkeLLLla~s~eeq~~WVs~L~k~I~k~~~~~~s~~ 79 (160)
||||++||+|||+||+|+ ++.||+ ||+.+|++|||+|.+++||..||++|.++|++.++.+++.+
T Consensus 1236 ~ye~~~~~~~~~~d~~~k---~m~p~k--y~~~~a~~l~l~a~~~~dq~eWV~~l~k~~~k~~~~~~~~~ 1300 (1317)
T KOG0612|consen 1236 AYECRRCHIKCHKDHMDK---IMAPCK--YDTSSARHLLLLAESTEDQAKWVQRLVKKIPKPLPAAGSFS 1300 (1317)
T ss_pred HHHHHHhhcccccccccc---ccCccc--ccccCCccceeccCCchHHHHHHHHHhcccCCCCCccccee
Confidence 999999999999999997 899999 99999999999999999999999999999999998877764
No 2
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.29 E-value=2.2e-07 Score=71.74 Aligned_cols=36 Identities=50% Similarity=0.794 Sum_probs=31.3
Q ss_pred Ccc--cccCchhhhhHhhcCCChHHHHHHHHHHHHhHhh
Q psy14437 34 PCK--LHCDPNSAKEMLLLAPSTDDQKLWVQRLSKKIQK 70 (160)
Q Consensus 34 pCk--~n~D~~~AkeLLLla~s~eeq~~WVs~L~k~I~k 70 (160)
||- +.|++. +++|||||+|.+||++||++|+|+||+
T Consensus 75 P~IF~I~~~~~-~~~lllLA~s~~ek~kWV~~L~~~~~~ 112 (112)
T cd01242 75 PKIFQILYANE-ARDLLLLAPQTDEQNKWVSRLVKKIPK 112 (112)
T ss_pred CeEEEEEeCCc-cceEEEEeCCchHHHHHHHHHHHhccC
Confidence 775 556654 699999999999999999999999986
No 3
>KOG0612|consensus
Probab=98.23 E-value=5.9e-07 Score=90.06 Aligned_cols=63 Identities=48% Similarity=0.660 Sum_probs=52.1
Q ss_pred CCCCCCcccccCccccCChhhhhHHhhcCCChHHHHHHHHHHHHHhhhcCCCCCC-----CCCCCccCCCCCCC
Q psy14437 90 DHLNGKEEAIAPCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLSKKIQKCGYKANT-----LSDGVKISPREKTD 158 (160)
Q Consensus 90 dhldkKeprsaPCk~~~D~~tAk~lLlla~s~eeq~~WVs~L~kkIpk~~~~~~s-----~~~~~r~sp~~s~r 158 (160)
+|.+. .+.||+ ||..+|++|||+|.+++||..||++|.|||++.++.+.+ ++. .+++.+++++
T Consensus 1249 d~~~k---~m~p~k--y~~~~a~~l~l~a~~~~dq~eWV~~l~k~~~k~~~~~~~~~~~s~~~-~~~~~s~~~~ 1316 (1317)
T KOG0612|consen 1249 DHMDK---IMAPCK--YDTSSARHLLLLAESTEDQAKWVQRLVKKIPKPLPAAGSFSRSSPRT-LKISLSQSIR 1316 (1317)
T ss_pred ccccc---ccCccc--ccccCCccceeccCCchHHHHHHHHHhcccCCCCCcccceecccccc-chhhhhhhhc
Confidence 55554 589999 999999999999999999999999999999999877555 222 6677776654
No 4
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.18 E-value=4.5e-07 Score=70.03 Aligned_cols=32 Identities=53% Similarity=0.836 Sum_probs=27.9
Q ss_pred cCChhhhhHHhhcCCChHHHHHHHHHHHHHhhh
Q psy14437 105 HCDPNSAKEMLLLAPSTDDQKLWVQRLSKKIQK 137 (160)
Q Consensus 105 ~~D~~tAk~lLlla~s~eeq~~WVs~L~kkIpk 137 (160)
-|+.. +++|||||.|.+||++||++|+|+|||
T Consensus 81 ~~~~~-~~~lllLA~s~~ek~kWV~~L~~~~~~ 112 (112)
T cd01242 81 LYANE-ARDLLLLAPQTDEQNKWVSRLVKKIPK 112 (112)
T ss_pred EeCCc-cceEEEEeCCchHHHHHHHHHHHhccC
Confidence 34433 599999999999999999999999986
No 5
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=79.41 E-value=0.95 Score=29.91 Aligned_cols=24 Identities=38% Similarity=0.670 Sum_probs=21.7
Q ss_pred hhHhhcCCChHHHHHHHHHHHHhH
Q psy14437 45 KEMLLLAPSTDDQKLWVQRLSKKI 68 (160)
Q Consensus 45 keLLLla~s~eeq~~WVs~L~k~I 68 (160)
+.++|.|.|.||...||..|.+-|
T Consensus 80 ~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 80 KSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHh
Confidence 689999999999999999998754
No 6
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=79.17 E-value=1.1 Score=33.05 Aligned_cols=28 Identities=21% Similarity=0.418 Sum_probs=24.8
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHHHhHh
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLSKKIQ 69 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~k~I~ 69 (160)
+..|.+.|-|.|.||-..|+..|.+-|.
T Consensus 71 ~~~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 71 GGQCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred cCCeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 3457799999999999999999999885
No 7
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=78.28 E-value=1.2 Score=31.13 Aligned_cols=26 Identities=19% Similarity=0.462 Sum_probs=22.4
Q ss_pred hhhhHhhcCCChHHHHHHHHHHHHhH
Q psy14437 43 SAKEMLLLAPSTDDQKLWVQRLSKKI 68 (160)
Q Consensus 43 ~AkeLLLla~s~eeq~~WVs~L~k~I 68 (160)
..|-+.|.|.|.||...||..|+..|
T Consensus 76 ~~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 76 SKRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred CCceEEEECCCHHHHHHHHHHHHhhC
Confidence 45778888999999999999998765
No 8
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=74.53 E-value=1.9 Score=28.43 Aligned_cols=24 Identities=38% Similarity=0.670 Sum_probs=21.3
Q ss_pred hHHhhcCCChHHHHHHHHHHHHHh
Q psy14437 112 KEMLLLAPSTDDQKLWVQRLSKKI 135 (160)
Q Consensus 112 k~lLlla~s~eeq~~WVs~L~kkI 135 (160)
+.++|.|.|.||...||..|.+-|
T Consensus 80 ~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 80 KSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHh
Confidence 689999999999999999987644
No 9
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=72.23 E-value=2 Score=31.26 Aligned_cols=24 Identities=25% Similarity=0.634 Sum_probs=21.2
Q ss_pred hhhhHhhcCCChHHHHHHHHHHHH
Q psy14437 43 SAKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 43 ~AkeLLLla~s~eeq~~WVs~L~k 66 (160)
..|-++|.|.|.||...||..+.+
T Consensus 83 ~~r~y~l~A~s~ee~~~Wi~~I~~ 106 (108)
T cd01266 83 IVRDLYLVAKNEEEMTLWVNCICK 106 (108)
T ss_pred CCccEEEEECCHHHHHHHHHHHHh
Confidence 468899999999999999999854
No 10
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=72.04 E-value=2 Score=31.70 Aligned_cols=26 Identities=23% Similarity=0.440 Sum_probs=23.2
Q ss_pred hhHHhhcCCChHHHHHHHHHHHHHhh
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLSKKIQ 136 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~kkIp 136 (160)
.|.+.|-|.|++|...|+..|.+-|.
T Consensus 73 ~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 73 QCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 46799999999999999999998774
No 11
>cd00029 C1 Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis).
Probab=69.93 E-value=2.1 Score=26.39 Aligned_cols=20 Identities=20% Similarity=0.376 Sum_probs=18.0
Q ss_pred cccccCcccccccccccccc
Q psy14437 8 NFNVTPIRCRIKVHKDHLNG 27 (160)
Q Consensus 8 ~~a~ecrrC~~K~Hkdh~d~ 27 (160)
.++|+|..|.+.+|+.-.++
T Consensus 26 ~~~~~C~~C~~~~H~~C~~~ 45 (50)
T cd00029 26 KQGLRCSWCKVKCHKKCADK 45 (50)
T ss_pred cceeEcCCCCCchhhhhhcc
Confidence 68999999999999998774
No 12
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=69.75 E-value=2.9 Score=30.30 Aligned_cols=26 Identities=23% Similarity=0.391 Sum_probs=23.6
Q ss_pred hhHhhcCCChHHHHHHHHHHHHhHhh
Q psy14437 45 KEMLLLAPSTDDQKLWVQRLSKKIQK 70 (160)
Q Consensus 45 keLLLla~s~eeq~~WVs~L~k~I~k 70 (160)
|-+.|.|.|+||...||..|..-|.+
T Consensus 76 rsf~l~A~s~eEk~~W~~ai~~~i~~ 101 (101)
T cd01219 76 RCLELQARTQKEKNDWVQAIFSIIDE 101 (101)
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHhhC
Confidence 88899999999999999999988753
No 13
>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains). Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains.
Probab=69.54 E-value=1.6 Score=26.59 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=17.0
Q ss_pred ccccCcccccccccccccc
Q psy14437 9 FNVTPIRCRIKVHKDHLNG 27 (160)
Q Consensus 9 ~a~ecrrC~~K~Hkdh~d~ 27 (160)
++++|..|.+.+|+.-+.+
T Consensus 26 ~~~~C~~C~~~~H~~C~~~ 44 (49)
T smart00109 26 QGLRCSWCKVKCHKKCAEK 44 (49)
T ss_pred CCcCCCCCCchHHHHHHhh
Confidence 6999999999999987774
No 14
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=69.39 E-value=2.7 Score=30.18 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=25.0
Q ss_pred CcccccCchhhhhHhhcCCChHHHHHHHHHHHHh
Q psy14437 34 PCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLSKK 67 (160)
Q Consensus 34 pCk~n~D~~~AkeLLLla~s~eeq~~WVs~L~k~ 67 (160)
++.+... +..|-..|.|.|.||...||.-|..+
T Consensus 61 ~~~F~i~-t~~r~y~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 61 KGRFEIH-SNNEVIALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred CCEEEEE-cCCcEEEEECCCHHHHHHHHHHHHhh
Confidence 4444432 34577899999999999999998865
No 15
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=67.84 E-value=3.9 Score=28.59 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=20.4
Q ss_pred hhhhHhhcCCChHHHHHHHHHHH
Q psy14437 43 SAKEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 43 ~AkeLLLla~s~eeq~~WVs~L~ 65 (160)
..+.++|-|.|.||+++||..|.
T Consensus 72 ~~~~~~f~a~s~~e~~~Wi~ai~ 94 (96)
T cd01260 72 VYKSFYFAAETLDDLSQWVNHLI 94 (96)
T ss_pred CCcEEEEEeCCHHHHHHHHHHHH
Confidence 44789999999999999999885
No 16
>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger. Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....
Probab=67.12 E-value=3.4 Score=26.27 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=21.4
Q ss_pred cccccccCccccccccccccccccccccCcc
Q psy14437 6 VLNFNVTPIRCRIKVHKDHLNGKEEAIAPCK 36 (160)
Q Consensus 6 ~~~~a~ecrrC~~K~Hkdh~d~ke~~i~pCk 36 (160)
+...+|+|..|.+.+|++-+++ +...|.
T Consensus 24 ~~~~g~~C~~C~~~~H~~C~~~---~~~~C~ 51 (53)
T PF00130_consen 24 LGKQGYRCSWCGLVCHKKCLSK---VPPSCG 51 (53)
T ss_dssp SSSCEEEETTTT-EEETTGGCT---SSSBSS
T ss_pred CCCCeEEECCCCChHhhhhhhh---cCCCCC
Confidence 4577999999999999999885 445554
No 17
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=67.00 E-value=2.9 Score=33.07 Aligned_cols=22 Identities=32% Similarity=0.567 Sum_probs=19.8
Q ss_pred hhHHhhcCCChHHHHHHHHHHH
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~ 132 (160)
-.-|||||.|-.|-++||.-|.
T Consensus 95 ~~~~~~lA~s~~eK~kWV~aL~ 116 (122)
T cd01243 95 KCSTLMLADTEEEKSKWVGALS 116 (122)
T ss_pred ccEEEEEeCCchHHHHHHHHHH
Confidence 4678999999999999999886
No 18
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=66.55 E-value=3.8 Score=26.17 Aligned_cols=24 Identities=38% Similarity=0.652 Sum_probs=20.6
Q ss_pred hhHhhcCCChHHHHHHHHHHHHhH
Q psy14437 45 KEMLLLAPSTDDQKLWVQRLSKKI 68 (160)
Q Consensus 45 keLLLla~s~eeq~~WVs~L~k~I 68 (160)
+.+++.|.|.+|.+.|+..|..-+
T Consensus 78 ~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 78 RSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred ceEEEEcCCHHHHHHHHHHHHHhh
Confidence 578889999999999999987643
No 19
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=66.24 E-value=3.3 Score=28.84 Aligned_cols=25 Identities=16% Similarity=0.452 Sum_probs=20.8
Q ss_pred hhHHhhcCCChHHHHHHHHHHHHHh
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLSKKI 135 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~kkI 135 (160)
.|-+.|.|.|.||...||..|..-|
T Consensus 77 ~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 77 KRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred CceEEEECCCHHHHHHHHHHHHhhC
Confidence 4667778999999999999987544
No 20
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=65.67 E-value=2.9 Score=30.91 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=20.6
Q ss_pred hhhHhhcCCChHHHHHHHHHHHH
Q psy14437 44 AKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 44 AkeLLLla~s~eeq~~WVs~L~k 66 (160)
.+-+.|-|.+.+|++.||+-|.+
T Consensus 75 ~r~~yi~a~s~~E~~~Wi~al~k 97 (98)
T cd01244 75 DDTMQLQFEAPVEATDWLNALEK 97 (98)
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 46799999999999999999875
No 21
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=65.45 E-value=3.8 Score=29.87 Aligned_cols=27 Identities=11% Similarity=0.493 Sum_probs=24.0
Q ss_pred hhhhHhhcCCChHHHHHHHHHHHHhHh
Q psy14437 43 SAKEMLLLAPSTDDQKLWVQRLSKKIQ 69 (160)
Q Consensus 43 ~AkeLLLla~s~eeq~~WVs~L~k~I~ 69 (160)
..|-.+|-|.|.||...||..|.+.|.
T Consensus 75 ~~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 75 PERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred CCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 367889999999999999999998874
No 22
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=65.11 E-value=4.7 Score=29.91 Aligned_cols=24 Identities=13% Similarity=0.379 Sum_probs=20.3
Q ss_pred hhcCCChHHHHHHHHHHHHhHhhc
Q psy14437 48 LLLAPSTDDQKLWVQRLSKKIQKC 71 (160)
Q Consensus 48 LLla~s~eeq~~WVs~L~k~I~k~ 71 (160)
.|-|.+.||.+.||..|..-|..+
T Consensus 93 ~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 93 RISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred EEECCCHHHHHHHHHHHHHHHhcC
Confidence 377999999999999999887433
No 23
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=64.58 E-value=3.6 Score=29.97 Aligned_cols=23 Identities=22% Similarity=0.615 Sum_probs=20.1
Q ss_pred hhhHHhhcCCChHHHHHHHHHHH
Q psy14437 110 SAKEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 110 tAk~lLlla~s~eeq~~WVs~L~ 132 (160)
..|-.+|.|.|.||+..||..+.
T Consensus 83 ~~r~y~l~A~s~ee~~~Wi~~I~ 105 (108)
T cd01266 83 IVRDLYLVAKNEEEMTLWVNCIC 105 (108)
T ss_pred CCccEEEEECCHHHHHHHHHHHH
Confidence 35778899999999999999884
No 24
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=64.05 E-value=3.2 Score=29.06 Aligned_cols=22 Identities=32% Similarity=0.502 Sum_probs=19.2
Q ss_pred hhHHhhcCCChHHHHHHHHHHH
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~ 132 (160)
.+.++|-|.|.||+.+||..|.
T Consensus 73 ~~~~~f~a~s~~e~~~Wi~ai~ 94 (96)
T cd01260 73 YKSFYFAAETLDDLSQWVNHLI 94 (96)
T ss_pred CcEEEEEeCCHHHHHHHHHHHH
Confidence 3678899999999999999874
No 25
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=64.01 E-value=3.2 Score=32.84 Aligned_cols=22 Identities=32% Similarity=0.567 Sum_probs=19.8
Q ss_pred hhhHhhcCCChHHHHHHHHHHH
Q psy14437 44 AKEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 44 AkeLLLla~s~eeq~~WVs~L~ 65 (160)
-.-|||||.|-.|-++||.-|.
T Consensus 95 ~~~~~~lA~s~~eK~kWV~aL~ 116 (122)
T cd01243 95 KCSTLMLADTEEEKSKWVGALS 116 (122)
T ss_pred ccEEEEEeCCchHHHHHHHHHH
Confidence 4679999999999999999875
No 26
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=63.08 E-value=3.8 Score=25.93 Aligned_cols=21 Identities=29% Similarity=0.651 Sum_probs=19.5
Q ss_pred hhHhhcCCChHHHHHHHHHHH
Q psy14437 45 KEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 45 keLLLla~s~eeq~~WVs~L~ 65 (160)
+.++|.|.|.+|...|+..|.
T Consensus 74 ~~~~~~~~s~~~~~~W~~~l~ 94 (96)
T cd00821 74 RSYLLQAESEEEREEWIEALQ 94 (96)
T ss_pred cEEEEEeCCHHHHHHHHHHHh
Confidence 888999999999999999885
No 27
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=62.16 E-value=4.8 Score=29.17 Aligned_cols=25 Identities=24% Similarity=0.391 Sum_probs=22.5
Q ss_pred hHHhhcCCChHHHHHHHHHHHHHhh
Q psy14437 112 KEMLLLAPSTDDQKLWVQRLSKKIQ 136 (160)
Q Consensus 112 k~lLlla~s~eeq~~WVs~L~kkIp 136 (160)
|-+.|-|.|+||...||..|..-|.
T Consensus 76 rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 76 RCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 6788999999999999999988774
No 28
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=61.46 E-value=6.3 Score=29.30 Aligned_cols=34 Identities=21% Similarity=0.557 Sum_probs=26.3
Q ss_pred Ccccc---cCchhhhhHhhcCCChHHHHHHHHHHHHhH
Q psy14437 34 PCKLH---CDPNSAKEMLLLAPSTDDQKLWVQRLSKKI 68 (160)
Q Consensus 34 pCk~n---~D~~~AkeLLLla~s~eeq~~WVs~L~k~I 68 (160)
||++. +| ....-+.|-|.|.|+=+.|+.+|.+-|
T Consensus 59 ~~~F~v~~~~-~p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 59 PLCFRVIPFD-DPKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred CcEEEEEecC-CCceEEEEEecCHHHHHHHHHHHHHHh
Confidence 78874 33 222478899999999999999998754
No 29
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=60.69 E-value=4.8 Score=31.31 Aligned_cols=24 Identities=17% Similarity=0.451 Sum_probs=20.8
Q ss_pred HHhhcCCChHHHHHHHHHHHHHhh
Q psy14437 113 EMLLLAPSTDDQKLWVQRLSKKIQ 136 (160)
Q Consensus 113 ~lLlla~s~eeq~~WVs~L~kkIp 136 (160)
-+++..+|++|-..|+.||.+.|+
T Consensus 87 ~i~v~C~~~~e~~~Wl~hL~~~~~ 110 (111)
T cd01225 87 RIVVVCNNPQDAQEWVELLNANNP 110 (111)
T ss_pred cEEEEeCCHHHHHHHHHHHHhhcC
Confidence 367889999999999999998764
No 30
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=60.51 E-value=4.8 Score=31.31 Aligned_cols=24 Identities=17% Similarity=0.451 Sum_probs=20.8
Q ss_pred hHhhcCCChHHHHHHHHHHHHhHh
Q psy14437 46 EMLLLAPSTDDQKLWVQRLSKKIQ 69 (160)
Q Consensus 46 eLLLla~s~eeq~~WVs~L~k~I~ 69 (160)
-+++..+|++|-+.|+.+|.+.|+
T Consensus 87 ~i~v~C~~~~e~~~Wl~hL~~~~~ 110 (111)
T cd01225 87 RIVVVCNNPQDAQEWVELLNANNP 110 (111)
T ss_pred cEEEEeCCHHHHHHHHHHHHhhcC
Confidence 466788999999999999998774
No 31
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=60.38 E-value=3.2 Score=32.55 Aligned_cols=21 Identities=38% Similarity=0.650 Sum_probs=18.7
Q ss_pred hhHHhhcCCChHHHHHHHHHH
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRL 131 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L 131 (160)
-.+|+|=|.|.+|..+||+-|
T Consensus 98 ~~el~L~a~S~sdr~rWi~Al 118 (125)
T cd01221 98 QAELLLSADSQSDRERWLSAL 118 (125)
T ss_pred EEEEEEECCCHHHHHHHHHhc
Confidence 467899999999999999876
No 32
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=60.34 E-value=3.6 Score=30.43 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=20.2
Q ss_pred hhHHhhcCCChHHHHHHHHHHHH
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLSK 133 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~k 133 (160)
.+-+.|-|+|.+|+..||+-|.|
T Consensus 75 ~r~~yi~a~s~~E~~~Wi~al~k 97 (98)
T cd01244 75 DDTMQLQFEAPVEATDWLNALEK 97 (98)
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 35789999999999999998865
No 33
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=60.32 E-value=4.9 Score=28.82 Aligned_cols=24 Identities=29% Similarity=0.473 Sum_probs=20.3
Q ss_pred hhHHhhcCCChHHHHHHHHHHHHH
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLSKK 134 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~kk 134 (160)
.|-..|-|.|.||...||.-|..+
T Consensus 70 ~r~y~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 70 NEVIALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred CcEEEEECCCHHHHHHHHHHHHhh
Confidence 456788999999999999998764
No 34
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=58.54 E-value=5.2 Score=29.27 Aligned_cols=23 Identities=22% Similarity=0.606 Sum_probs=19.7
Q ss_pred hhhHhhcCCChHHHHHHHHHHHH
Q psy14437 44 AKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 44 AkeLLLla~s~eeq~~WVs~L~k 66 (160)
.+-+.|.|.|.||++.||.-|.+
T Consensus 83 ~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 83 EGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred CCeEEEEcCCHHHHHHHHHHHHh
Confidence 46778899999999999998864
No 35
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=58.51 E-value=3.9 Score=32.08 Aligned_cols=24 Identities=33% Similarity=0.616 Sum_probs=20.3
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHH
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~ 65 (160)
+.-++|+|=|.|.+|..+|++-|.
T Consensus 96 gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 96 DKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred CCEEEEEEECCCHHHHHHHHHhcC
Confidence 445789999999999999998763
No 36
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=58.50 E-value=5.4 Score=26.84 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=19.2
Q ss_pred hhHhhcCCChHHHHHHHHHHH
Q psy14437 45 KEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 45 keLLLla~s~eeq~~WVs~L~ 65 (160)
+.++|-|.+.||.++||.-|.
T Consensus 72 ~~~~f~a~s~~~~~~Wi~al~ 92 (94)
T cd01250 72 KTWHFQADSEEERDDWISAIQ 92 (94)
T ss_pred cEEEEECCCHHHHHHHHHHHh
Confidence 778899999999999999885
No 37
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=57.95 E-value=5.1 Score=30.05 Aligned_cols=25 Identities=20% Similarity=0.416 Sum_probs=21.8
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHHH
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~k 66 (160)
+-.|.+.|.|.|.||++.|++-|..
T Consensus 78 tp~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 78 TPDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHh
Confidence 3358899999999999999998875
No 38
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=57.80 E-value=6.3 Score=29.58 Aligned_cols=29 Identities=14% Similarity=0.436 Sum_probs=24.8
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHHHhHhh
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLSKKIQK 70 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~k~I~k 70 (160)
+..|-..+.|.|.+|...|+.+|.+-|..
T Consensus 72 ~~~kSf~v~A~s~~eK~eWl~~i~~ai~~ 100 (104)
T cd01218 72 TPTKSFAVYAATETEKREWMLHINKCVTD 100 (104)
T ss_pred cCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 34667789999999999999999988854
No 39
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=57.20 E-value=5.3 Score=29.96 Aligned_cols=23 Identities=22% Similarity=0.439 Sum_probs=20.6
Q ss_pred hhHHhhcCCChHHHHHHHHHHHH
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLSK 133 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~k 133 (160)
.|.+.|.|.|.||++.||.-|.+
T Consensus 80 ~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 80 DKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CceEEEEeCCHHHHHHHHHHHHh
Confidence 58899999999999999998864
No 40
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=53.60 E-value=7.1 Score=28.99 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=19.0
Q ss_pred hHHhhcCCChHHHHHHHHHHH
Q psy14437 112 KEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 112 k~lLlla~s~eeq~~WVs~L~ 132 (160)
+-++|.|.|.+||..|+..|.
T Consensus 79 r~f~l~aese~E~~~Wi~~i~ 99 (101)
T cd01257 79 EYFAVAAENEAEQDSWYQALL 99 (101)
T ss_pred ceEEEEeCCHHHHHHHHHHHh
Confidence 678899999999999999885
No 41
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=53.28 E-value=7.9 Score=28.19 Aligned_cols=26 Identities=12% Similarity=0.507 Sum_probs=22.9
Q ss_pred hhHHhhcCCChHHHHHHHHHHHHHhh
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLSKKIQ 136 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~kkIp 136 (160)
-|..+|-|.|.+|...||..|.+-|.
T Consensus 76 ~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 76 ERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 67788999999999999999988774
No 42
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=52.31 E-value=7.1 Score=26.26 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=18.9
Q ss_pred hHHhhcCCChHHHHHHHHHHH
Q psy14437 112 KEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 112 k~lLlla~s~eeq~~WVs~L~ 132 (160)
+.++|-|.|.||.+.||.-|.
T Consensus 72 ~~~~f~a~s~~~~~~Wi~al~ 92 (94)
T cd01250 72 KTWHFQADSEEERDDWISAIQ 92 (94)
T ss_pred cEEEEECCCHHHHHHHHHHHh
Confidence 778899999999999999874
No 43
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=51.62 E-value=12 Score=27.41 Aligned_cols=22 Identities=23% Similarity=0.634 Sum_probs=18.7
Q ss_pred hHHhhcCCChHHHHHHHHHHHH
Q psy14437 112 KEMLLLAPSTDDQKLWVQRLSK 133 (160)
Q Consensus 112 k~lLlla~s~eeq~~WVs~L~k 133 (160)
+-+-|.|.|.+|++.||.-|.+
T Consensus 84 r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 84 GTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred CeEEEEcCCHHHHHHHHHHHHh
Confidence 5677889999999999998754
No 44
>PF10880 DUF2673: Protein of unknown function (DUF2673); InterPro: IPR024247 This family of proteins with unknown function appears to be restricted to Rickettsiae spp.
Probab=50.54 E-value=10 Score=26.94 Aligned_cols=19 Identities=47% Similarity=0.681 Sum_probs=15.6
Q ss_pred HhhcCCChHHHHHHHHHHH
Q psy14437 114 MLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 114 lLlla~s~eeq~~WVs~L~ 132 (160)
--+.|-|.++|+.||.-|-
T Consensus 33 tqi~amst~~qq~wvaslt 51 (65)
T PF10880_consen 33 TQIQAMSTDDQQAWVASLT 51 (65)
T ss_pred HHHHHhcchhHHHHHHHhh
Confidence 3467889999999999874
No 45
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=47.93 E-value=9.1 Score=28.44 Aligned_cols=22 Identities=23% Similarity=0.342 Sum_probs=19.4
Q ss_pred hhhHhhcCCChHHHHHHHHHHH
Q psy14437 44 AKEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 44 AkeLLLla~s~eeq~~WVs~L~ 65 (160)
.+-.+|.|.|.+||..|+..|.
T Consensus 78 dr~f~l~aese~E~~~Wi~~i~ 99 (101)
T cd01257 78 DEYFAVAAENEAEQDSWYQALL 99 (101)
T ss_pred CceEEEEeCCHHHHHHHHHHHh
Confidence 3678899999999999999875
No 46
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=47.27 E-value=10 Score=28.48 Aligned_cols=26 Identities=15% Similarity=0.468 Sum_probs=22.5
Q ss_pred hhHHhhcCCChHHHHHHHHHHHHHhh
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLSKKIQ 136 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~kkIp 136 (160)
.|-..+.|.|++|...|+.+|.+-|.
T Consensus 74 ~kSf~v~A~s~~eK~eWl~~i~~ai~ 99 (104)
T cd01218 74 TKSFAVYAATETEKREWMLHINKCVT 99 (104)
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 46677999999999999999988764
No 47
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=46.55 E-value=11 Score=25.15 Aligned_cols=23 Identities=30% Similarity=0.549 Sum_probs=20.0
Q ss_pred hhhhHhhcCCChHHHHHHHHHHH
Q psy14437 43 SAKEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 43 ~AkeLLLla~s~eeq~~WVs~L~ 65 (160)
..+.++|-|.+.||-..||.-|.
T Consensus 67 ~~~~~~~~a~s~~e~~~Wi~al~ 89 (91)
T cd01246 67 GDKTLHLRANSEEERQRWVDALE 89 (91)
T ss_pred CCCEEEEECCCHHHHHHHHHHHH
Confidence 34788999999999999999875
No 48
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=43.57 E-value=11 Score=28.25 Aligned_cols=25 Identities=24% Similarity=0.448 Sum_probs=22.5
Q ss_pred chhhhhHhhcCCChHHHHHHHHHHH
Q psy14437 41 PNSAKEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 41 ~~~AkeLLLla~s~eeq~~WVs~L~ 65 (160)
.+..|.|.|.|.|.++++.||.-|.
T Consensus 95 ~t~~R~~~l~a~s~~~~~~Wi~~i~ 119 (121)
T cd01254 95 TNSNRSLKLKCKSSRKLKQWMASIE 119 (121)
T ss_pred EcCCcEEEEEeCCHHHHHHHHHHHH
Confidence 4778999999999999999998875
No 49
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=42.39 E-value=22 Score=26.28 Aligned_cols=23 Identities=13% Similarity=0.421 Sum_probs=19.6
Q ss_pred hhcCCChHHHHHHHHHHHHHhhh
Q psy14437 115 LLLAPSTDDQKLWVQRLSKKIQK 137 (160)
Q Consensus 115 Llla~s~eeq~~WVs~L~kkIpk 137 (160)
.|-|.|.||...||..|..-|..
T Consensus 93 ~~~A~s~~e~~~Wi~al~~~~~~ 115 (125)
T cd01252 93 RISAANDEEMDEWIKSIKASISP 115 (125)
T ss_pred EEECCCHHHHHHHHHHHHHHHhc
Confidence 36799999999999999887743
No 50
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=41.74 E-value=11 Score=26.99 Aligned_cols=25 Identities=20% Similarity=0.401 Sum_probs=21.5
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHHH
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~k 66 (160)
+..+.+.|-|.|.+|-+.||.-|.+
T Consensus 66 ~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 66 NENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred CCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 3448899999999999999998864
No 51
>TIGR03504 FimV_Cterm FimV C-terminal domain. This protein is found at the extreme C-terminus of FimV from Pseudomonas aeruginosa, and of TspA of Neisseria meningitidis. Disruption of the former blocks twitching motility from type IV pili; Semmler, et al. suggest a role in peptidoglycan layer remodelling required by type IV fimbrial systems.
Probab=40.97 E-value=34 Score=22.12 Aligned_cols=29 Identities=21% Similarity=0.374 Sum_probs=23.7
Q ss_pred ChhhhhHHh--hcCCChHHHHHHHHHHHHHh
Q psy14437 107 DPNSAKEML--LLAPSTDDQKLWVQRLSKKI 135 (160)
Q Consensus 107 D~~tAk~lL--lla~s~eeq~~WVs~L~kkI 135 (160)
|...||++| |+....++|+.=...|+.+|
T Consensus 14 d~e~Ar~lL~evl~~~~~~q~~eA~~LL~~l 44 (44)
T TIGR03504 14 DLEGARELLEEVIEEGDEAQRQEARALLAQL 44 (44)
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHhcC
Confidence 678899998 67888888998888887764
No 52
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=40.01 E-value=13 Score=28.31 Aligned_cols=28 Identities=18% Similarity=0.329 Sum_probs=23.5
Q ss_pred ChhhhhHHhhcCCChHHHHHHHHHHHHH
Q psy14437 107 DPNSAKEMLLLAPSTDDQKLWVQRLSKK 134 (160)
Q Consensus 107 D~~tAk~lLlla~s~eeq~~WVs~L~kk 134 (160)
.-+..|-+.++|.|++|-..|+.|+.+-
T Consensus 66 ~~~~~KSf~~~asS~~Er~eW~~hI~~~ 93 (96)
T cd01228 66 HNKNGKSYTFLLSSDYERSEWRESIQKL 93 (96)
T ss_pred cccCCceEEEEecCHHHHHHHHHHHHHH
Confidence 3445788899999999999999998753
No 53
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=38.72 E-value=18 Score=28.13 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=26.0
Q ss_pred cccCcccccCchhhhhHhhcCCChHHHHHHHHHHHH
Q psy14437 31 AIAPCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 31 ~i~pCk~n~D~~~AkeLLLla~s~eeq~~WVs~L~k 66 (160)
..-|.++.|=...-..+-|-|+|.-+++.|++++-+
T Consensus 98 ~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~ 133 (135)
T PF15405_consen 98 SLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEE 133 (135)
T ss_dssp SEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHH
T ss_pred CccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 456888877666667799999999999999998864
No 54
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=37.34 E-value=35 Score=30.81 Aligned_cols=35 Identities=20% Similarity=0.412 Sum_probs=28.2
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHHHhHhhcCCCCCC
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLSKKIQKCGYKANT 77 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~k~I~k~~~~~~s 77 (160)
+.-||+|||||+ |.|++=.++..+-.+|-++.+..
T Consensus 218 ~al~eiLlmtP~-el~q~ies~~~~~v~k~~f~~~~ 252 (314)
T COG3965 218 SALREILLMTPN-ELQQSIESHAHEIVEKYGFPSYH 252 (314)
T ss_pred HHHHHHHhcCcH-HHHHHHHHHHHHHHHHhcCchHH
Confidence 456999999999 88999888888888887765433
No 55
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=37.20 E-value=17 Score=23.07 Aligned_cols=23 Identities=22% Similarity=0.524 Sum_probs=20.3
Q ss_pred hhhHhhcCCChHHHHHHHHHHHH
Q psy14437 44 AKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 44 AkeLLLla~s~eeq~~WVs~L~k 66 (160)
-+.+.|-|.+.+|-+.|+..|..
T Consensus 76 ~~~~~~~~~~~~~~~~W~~al~~ 98 (99)
T cd00900 76 RRVFVFQADSEEEAQEWVEALQQ 98 (99)
T ss_pred cEEEEEEcCCHHHHHHHHHHHhc
Confidence 57889999999999999998864
No 56
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=36.78 E-value=15 Score=27.52 Aligned_cols=25 Identities=24% Similarity=0.448 Sum_probs=21.7
Q ss_pred hhhhhHHhhcCCChHHHHHHHHHHH
Q psy14437 108 PNSAKEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 108 ~~tAk~lLlla~s~eeq~~WVs~L~ 132 (160)
.+..|.+.|.|.|..+++.||.-+.
T Consensus 95 ~t~~R~~~l~a~s~~~~~~Wi~~i~ 119 (121)
T cd01254 95 TNSNRSLKLKCKSSRKLKQWMASIE 119 (121)
T ss_pred EcCCcEEEEEeCCHHHHHHHHHHHH
Confidence 3567899999999999999998764
No 57
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=36.71 E-value=18 Score=25.98 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=20.4
Q ss_pred hhhhHhhcCCChHHHHHHHHHHHH
Q psy14437 43 SAKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 43 ~AkeLLLla~s~eeq~~WVs~L~k 66 (160)
..|-+.|-|.|.||.+.||..|..
T Consensus 73 ~~rt~~~~A~s~~e~~~Wi~ai~~ 96 (100)
T cd01233 73 KHRGYLFQALSDKEMIDWLYALNP 96 (100)
T ss_pred CCCEEEEEcCCHHHHHHHHHHhhh
Confidence 357788889999999999998864
No 58
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=36.37 E-value=29 Score=25.05 Aligned_cols=20 Identities=10% Similarity=0.423 Sum_probs=16.7
Q ss_pred hhcCCChHHHHHHHHHHHHh
Q psy14437 48 LLLAPSTDDQKLWVQRLSKK 67 (160)
Q Consensus 48 LLla~s~eeq~~WVs~L~k~ 67 (160)
.+-|.|.||++.||.-|...
T Consensus 82 ~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 82 TFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred EEEeCCHHHHHHHHHHHHhh
Confidence 45689999999999998754
No 59
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=36.35 E-value=16 Score=26.16 Aligned_cols=22 Identities=23% Similarity=0.339 Sum_probs=19.0
Q ss_pred hhHHhhcCCChHHHHHHHHHHH
Q psy14437 111 AKEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 111 Ak~lLlla~s~eeq~~WVs~L~ 132 (160)
.|-+.|-|.|+||.+.||..|.
T Consensus 74 ~rt~~~~A~s~~e~~~Wi~ai~ 95 (100)
T cd01233 74 HRGYLFQALSDKEMIDWLYALN 95 (100)
T ss_pred CCEEEEEcCCHHHHHHHHHHhh
Confidence 4667888999999999999875
No 60
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=36.11 E-value=39 Score=30.53 Aligned_cols=41 Identities=22% Similarity=0.399 Sum_probs=32.1
Q ss_pred CccccCChhhhhHHhhcCCChHHHHHHHHHHHHHhhhcCCCC
Q psy14437 101 PCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLSKKIQKCGYKA 142 (160)
Q Consensus 101 PCk~~~D~~tAk~lLlla~s~eeq~~WVs~L~kkIpk~~~~~ 142 (160)
|.|+--=.+.-||+|++|++ |.|++=.++-..-++|.++.+
T Consensus 210 plPlg~vk~al~eiLlmtP~-el~q~ies~~~~~v~k~~f~~ 250 (314)
T COG3965 210 PLPLGTVKSALREILLMTPN-ELQQSIESHAHEIVEKYGFPS 250 (314)
T ss_pred eccHHHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHhcCch
Confidence 55554445667999999999 889898888888888877654
No 61
>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A.
Probab=36.08 E-value=10 Score=23.53 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=13.7
Q ss_pred cccccCcccccccccccccc
Q psy14437 8 NFNVTPIRCRIKVHKDHLNG 27 (160)
Q Consensus 8 ~~a~ecrrC~~K~Hkdh~d~ 27 (160)
||-+.|.+|.+-+|+.=.+.
T Consensus 2 n~ll~C~~C~v~VH~~CYGv 21 (36)
T PF13831_consen 2 NPLLFCDNCNVAVHQSCYGV 21 (36)
T ss_dssp CEEEE-SSS--EEEHHHHT-
T ss_pred CceEEeCCCCCcCChhhCCc
Confidence 78899999999999876654
No 62
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=35.16 E-value=17 Score=27.15 Aligned_cols=32 Identities=13% Similarity=0.338 Sum_probs=22.4
Q ss_pred CcccccCchhhhhHhhcCCChHHHHHHHHHHH
Q psy14437 34 PCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 34 pCk~n~D~~~AkeLLLla~s~eeq~~WVs~L~ 65 (160)
+.++-.-+.+-.|.|+-|.+.||-+.||..+-
T Consensus 84 ~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN 115 (119)
T PF15410_consen 84 KNVFRLRTADGSEYLFQASDEEEMNEWIDAIN 115 (119)
T ss_dssp SSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCEEEEECCCHHHHHHHHHHHh
Confidence 44444334556899999999999999999874
No 63
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=34.50 E-value=20 Score=26.61 Aligned_cols=26 Identities=19% Similarity=0.388 Sum_probs=21.3
Q ss_pred chhhhhHhhcCCChHHHHHHHHHHHH
Q psy14437 41 PNSAKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 41 ~~~AkeLLLla~s~eeq~~WVs~L~k 66 (160)
.+-.|.|.|.+-+.||+..||.-|.+
T Consensus 86 ~T~~kt~~l~~~t~~d~~~Wi~aL~~ 111 (112)
T PF15413_consen 86 FTPTKTFHLRCETREDRYDWIEALQE 111 (112)
T ss_dssp E-SS-EEEEEESSHHHHHHHHHHHHH
T ss_pred ECCCcEEEEEECCHHHHHHHHHHHHh
Confidence 34579999999999999999998864
No 64
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=33.13 E-value=30 Score=25.36 Aligned_cols=21 Identities=43% Similarity=0.759 Sum_probs=18.3
Q ss_pred hhHhhcCCChHHHHHHHHHHH
Q psy14437 45 KEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 45 keLLLla~s~eeq~~WVs~L~ 65 (160)
+-|=|+|+|.|+-+.||.-|.
T Consensus 93 k~L~lVA~s~~~a~~W~~gL~ 113 (115)
T cd01248 93 KSLDLVAPSEEEAKTWVSGLR 113 (115)
T ss_pred eEEEEEECCHHHHHHHHHHHh
Confidence 447899999999999999875
No 65
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=31.70 E-value=25 Score=24.84 Aligned_cols=24 Identities=29% Similarity=0.621 Sum_probs=20.9
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHH
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLS 65 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~ 65 (160)
...+.++|-|.|.||-..||.-|.
T Consensus 79 ~~~~~~~f~a~s~e~~~~Wi~aL~ 102 (104)
T cd01253 79 PDGAEFLFQAPDEEEMSSWVRALK 102 (104)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh
Confidence 356789999999999999999874
No 66
>COG1860 Uncharacterized protein conserved in archaea [Function unknown]
Probab=31.42 E-value=18 Score=29.52 Aligned_cols=35 Identities=20% Similarity=0.400 Sum_probs=26.0
Q ss_pred cccccccccCccccccc--------cccccccccccccCcccc
Q psy14437 4 LSVLNFNVTPIRCRIKV--------HKDHLNGKEEAIAPCKLH 38 (160)
Q Consensus 4 ~~~~~~a~ecrrC~~K~--------Hkdh~d~ke~~i~pCk~n 38 (160)
+-++-|+-||+.|++|- ||-++-.=.+.+.||.+|
T Consensus 19 Fif~Gp~eeCk~Cr~k~~C~nLe~GrrYkVv~VR~~~~~C~ih 61 (147)
T COG1860 19 FIFLGPAEECKDCRLKNVCLNLEEGRRYKVVEVRSQVQPCPIH 61 (147)
T ss_pred EEEecCcccccCCcchheeeccCCCcEEEEEEehhccccccee
Confidence 34678999999999983 555555444678899996
No 67
>PF11939 DUF3457: Protein of unknown function (DUF3457); InterPro: IPR023994 Members of this family are chaperones for the assembly of [NiFe] hydrogenases, in the family of HybE, which is specific for hydrogenase-2 of Escherichia coli. Members often have an additional N-terminal rubredoxin domain. ; PDB: 2KC5_A.
Probab=31.22 E-value=16 Score=29.45 Aligned_cols=36 Identities=14% Similarity=0.190 Sum_probs=21.9
Q ss_pred CcccccccccccCccccccccccccccccccccCcccc
Q psy14437 1 MHKLSVLNFNVTPIRCRIKVHKDHLNGKEEAIAPCKLH 38 (160)
Q Consensus 1 ~~~~~~~~~a~ecrrC~~K~Hkdh~d~ke~~i~pCk~n 38 (160)
|+.|.++||++.+.-+-+.-|-++.-- -+|.|+-+|
T Consensus 20 M~~lP~~NpaL~VeAvGF~~~eg~~~G--vlvTPW~mn 55 (155)
T PF11939_consen 20 MRDLPFYNPALPVEAVGFRRFEGQWLG--VLVTPWFMN 55 (155)
T ss_dssp -GGG-----SS--EEEEEEEETTEEEE--EEE-SS-EE
T ss_pred hcCCCccCCCCCeEEeeeEEECCeEEE--EEechhhHh
Confidence 788999999999999999999887753 377999998
No 68
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=31.03 E-value=24 Score=26.51 Aligned_cols=24 Identities=25% Similarity=0.429 Sum_probs=20.9
Q ss_pred hhhHHhhcCCChHHHHHHHHHHHH
Q psy14437 110 SAKEMLLLAPSTDDQKLWVQRLSK 133 (160)
Q Consensus 110 tAk~lLlla~s~eeq~~WVs~L~k 133 (160)
..|-++|-|.|.+|...||+.|..
T Consensus 76 p~rt~~l~A~se~e~e~WI~~i~~ 99 (101)
T cd01264 76 ADKTYILKAKDEKNAEEWLQCLNI 99 (101)
T ss_pred CCceEEEEeCCHHHHHHHHHHHHh
Confidence 347789999999999999999864
No 69
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=30.81 E-value=23 Score=26.19 Aligned_cols=26 Identities=19% Similarity=0.388 Sum_probs=21.2
Q ss_pred hhhhhHHhhcCCChHHHHHHHHHHHH
Q psy14437 108 PNSAKEMLLLAPSTDDQKLWVQRLSK 133 (160)
Q Consensus 108 ~~tAk~lLlla~s~eeq~~WVs~L~k 133 (160)
.+-.|.+.|-+-+.||+..||.-|.+
T Consensus 86 ~T~~kt~~l~~~t~~d~~~Wi~aL~~ 111 (112)
T PF15413_consen 86 FTPTKTFHLRCETREDRYDWIEALQE 111 (112)
T ss_dssp E-SS-EEEEEESSHHHHHHHHHHHHH
T ss_pred ECCCcEEEEEECCHHHHHHHHHHHHh
Confidence 45579999999999999999998864
No 70
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=30.55 E-value=24 Score=26.94 Aligned_cols=27 Identities=19% Similarity=0.433 Sum_probs=23.0
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHHHhH
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLSKKI 68 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~k~I 68 (160)
...++.||-|++.||=..||..|.--.
T Consensus 85 ~~g~~~lfqA~~~ee~~~Wi~~I~~~~ 111 (117)
T cd01230 85 ADWREFLFQTSSLKELQSWIERINVVA 111 (117)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 446899999999999999999987543
No 71
>TIGR02753 sodN superoxide dismutase, Ni. This superoxide dismutase uses nickel, rather than iron, manganese, copper, or zinc. Its gene is always accompanied by a gene for a required protease.
Probab=30.35 E-value=23 Score=28.79 Aligned_cols=18 Identities=28% Similarity=0.457 Sum_probs=15.7
Q ss_pred cCccccCChhhhhHHhhc
Q psy14437 100 APCKLHCDPNSAKEMLLL 117 (160)
Q Consensus 100 aPCk~~~D~~tAk~lLll 117 (160)
..|++|.|+..|.+||=+
T Consensus 114 ~~~Kq~~D~a~a~~Ll~~ 131 (145)
T TIGR02753 114 SAAKVNIDKAAAQELLQY 131 (145)
T ss_pred HHHhcCCCHHHHHHHHHH
Confidence 489999999999999854
No 72
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=30.13 E-value=26 Score=26.74 Aligned_cols=27 Identities=19% Similarity=0.336 Sum_probs=23.1
Q ss_pred chhhhhHhhcCCChHHHHHHHHHHHHh
Q psy14437 41 PNSAKEMLLLAPSTDDQKLWVQRLSKK 67 (160)
Q Consensus 41 ~~~AkeLLLla~s~eeq~~WVs~L~k~ 67 (160)
-...|-..++|.|++|-..|+.|+.+-
T Consensus 67 ~~~~KSf~~~asS~~Er~eW~~hI~~~ 93 (96)
T cd01228 67 NKNGKSYTFLLSSDYERSEWRESIQKL 93 (96)
T ss_pred ccCCceEEEEecCHHHHHHHHHHHHHH
Confidence 345788899999999999999999753
No 73
>PF15409 PH_8: Pleckstrin homology domain
Probab=30.11 E-value=43 Score=24.79 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=24.3
Q ss_pred CcccccCchhhhhHhhcCCChHHHHHHHHHHHH
Q psy14437 34 PCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 34 pCk~n~D~~~AkeLLLla~s~eeq~~WVs~L~k 66 (160)
.|.+..|.+ +.=.-|-|.|++|=+.||+.|.+
T Consensus 56 ~~~I~idsg-~~i~hLKa~s~~~f~~Wv~aL~~ 87 (89)
T PF15409_consen 56 SRRIDIDSG-DEIWHLKAKSQEDFQRWVSALQK 87 (89)
T ss_pred CCEEEEEcC-CeEEEEEcCCHHHHHHHHHHHHh
Confidence 455655654 33567889999999999999974
No 74
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=28.77 E-value=36 Score=25.99 Aligned_cols=27 Identities=15% Similarity=0.380 Sum_probs=23.1
Q ss_pred hhhHhhcCCChHHHHHHHHHHHHhHhh
Q psy14437 44 AKEMLLLAPSTDDQKLWVQRLSKKIQK 70 (160)
Q Consensus 44 AkeLLLla~s~eeq~~WVs~L~k~I~k 70 (160)
.+-++|.|.++||=+.|+.+|..-|-+
T Consensus 85 ~~s~~l~Akt~eeK~~Wm~~l~~~~~~ 111 (112)
T cd01261 85 GNSVIFSAKNAEEKNNWMAALISVQTK 111 (112)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHhcC
Confidence 355899999999999999999887754
No 75
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=28.30 E-value=37 Score=25.91 Aligned_cols=26 Identities=15% Similarity=0.388 Sum_probs=22.4
Q ss_pred hHHhhcCCChHHHHHHHHHHHHHhhh
Q psy14437 112 KEMLLLAPSTDDQKLWVQRLSKKIQK 137 (160)
Q Consensus 112 k~lLlla~s~eeq~~WVs~L~kkIpk 137 (160)
+-+.|.|.++||-+.|+.+|..-|-|
T Consensus 86 ~s~~l~Akt~eeK~~Wm~~l~~~~~~ 111 (112)
T cd01261 86 NSVIFSAKNAEEKNNWMAALISVQTK 111 (112)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHhcC
Confidence 45889999999999999999987744
No 76
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=27.32 E-value=28 Score=25.89 Aligned_cols=24 Identities=17% Similarity=0.494 Sum_probs=19.0
Q ss_pred hhhhHHhhcCCChHHHHHHHHHHH
Q psy14437 109 NSAKEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 109 ~tAk~lLlla~s~eeq~~WVs~L~ 132 (160)
.+-.+.|+-|.|.||-..||..+-
T Consensus 92 ~dg~e~Lfqa~~~~~m~~Wi~~IN 115 (119)
T PF15410_consen 92 ADGSEYLFQASDEEEMNEWIDAIN 115 (119)
T ss_dssp TTS-EEEEE-SSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh
Confidence 345799999999999999999863
No 77
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=27.13 E-value=30 Score=25.97 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=21.4
Q ss_pred hhhhhHhhcCCChHHHHHHHHHHHH
Q psy14437 42 NSAKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 42 ~~AkeLLLla~s~eeq~~WVs~L~k 66 (160)
+..|-++|-|.|.+|...||+.|..
T Consensus 75 tp~rt~~l~A~se~e~e~WI~~i~~ 99 (101)
T cd01264 75 TADKTYILKAKDEKNAEEWLQCLNI 99 (101)
T ss_pred cCCceEEEEeCCHHHHHHHHHHHHh
Confidence 3457789999999999999999864
No 78
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=26.90 E-value=27 Score=26.64 Aligned_cols=25 Identities=20% Similarity=0.482 Sum_probs=21.6
Q ss_pred hhhHHhhcCCChHHHHHHHHHHHHH
Q psy14437 110 SAKEMLLLAPSTDDQKLWVQRLSKK 134 (160)
Q Consensus 110 tAk~lLlla~s~eeq~~WVs~L~kk 134 (160)
..++.|+-|.+.||=..||..|.--
T Consensus 86 ~g~~~lfqA~~~ee~~~Wi~~I~~~ 110 (117)
T cd01230 86 DWREFLFQTSSLKELQSWIERINVV 110 (117)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHH
Confidence 3579999999999999999988643
No 79
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=26.89 E-value=65 Score=24.56 Aligned_cols=36 Identities=31% Similarity=0.725 Sum_probs=27.1
Q ss_pred Ccccc---cCch-hhhhHhhcCCChHHHHHHHHHHHHhHh
Q psy14437 34 PCKLH---CDPN-SAKEMLLLAPSTDDQKLWVQRLSKKIQ 69 (160)
Q Consensus 34 pCk~n---~D~~-~AkeLLLla~s~eeq~~WVs~L~k~I~ 69 (160)
||++- .++. +..-..|=|+|.|+-+.||.+|.+-++
T Consensus 74 ~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 74 PCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred CceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 78862 2333 335678999999999999999987653
No 80
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=26.47 E-value=28 Score=26.83 Aligned_cols=23 Identities=13% Similarity=0.278 Sum_probs=19.9
Q ss_pred hhhHhhcCCChHHHHHHHHHHHH
Q psy14437 44 AKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 44 AkeLLLla~s~eeq~~WVs~L~k 66 (160)
.+-.++.|.++|+-++|+..|..
T Consensus 83 ~~~~~f~~Kt~e~K~~Wm~a~~~ 105 (109)
T cd01224 83 DEWYLFSFKSAERKHRWLSAFAL 105 (109)
T ss_pred CeEEEEEECCHHHHHHHHHHHHH
Confidence 44589999999999999999873
No 81
>PLN03207 stomagen; Provisional
Probab=23.47 E-value=33 Score=26.82 Aligned_cols=16 Identities=19% Similarity=0.312 Sum_probs=13.4
Q ss_pred ccCccccccccccccc
Q psy14437 11 VTPIRCRIKVHKDHLN 26 (160)
Q Consensus 11 ~ecrrC~~K~Hkdh~d 26 (160)
-|||-|+.||--+-|-
T Consensus 79 necrgcr~kc~~eqvp 94 (113)
T PLN03207 79 NECRGCRYKCRAEQVP 94 (113)
T ss_pred ccccCccccccceecc
Confidence 4999999999877654
No 82
>KOG3523|consensus
Probab=22.20 E-value=39 Score=33.49 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=23.1
Q ss_pred CccccCChhhhhHHhhcCCChHHHHHHHHHHH
Q psy14437 101 PCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLS 132 (160)
Q Consensus 101 PCk~~~D~~tAk~lLlla~s~eeq~~WVs~L~ 132 (160)
+.--|.|-.. -+|||=|.|+-|++||++-|.
T Consensus 561 tLl~N~~~~~-~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 561 TLLSNHQGRQ-TELLLSAESQSDRQRWISALR 591 (695)
T ss_pred ehhhccCCCc-eeeeecCCchHHHHHHHHhcC
Confidence 3344444333 379999999999999999886
No 83
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=21.43 E-value=79 Score=24.54 Aligned_cols=35 Identities=14% Similarity=0.348 Sum_probs=24.4
Q ss_pred ccCccccCChhhhhHHhhcCCChHHHHHHHHHHHH
Q psy14437 99 IAPCKLHCDPNSAKEMLLLAPSTDDQKLWVQRLSK 133 (160)
Q Consensus 99 saPCk~~~D~~tAk~lLlla~s~eeq~~WVs~L~k 133 (160)
.=|..+.|=...-..+-|-|+|.-+++.|+.++-+
T Consensus 99 ~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~ 133 (135)
T PF15405_consen 99 LYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEE 133 (135)
T ss_dssp EEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHH
T ss_pred ccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 34777766666666789999999999999998865
No 84
>PF15408 PH_7: Pleckstrin homology domain
Probab=21.33 E-value=49 Score=25.45 Aligned_cols=23 Identities=17% Similarity=0.356 Sum_probs=19.8
Q ss_pred hhhHhhcCCChHHHHHHHHHHHH
Q psy14437 44 AKEMLLLAPSTDDQKLWVQRLSK 66 (160)
Q Consensus 44 AkeLLLla~s~eeq~~WVs~L~k 66 (160)
-+.+-+.|.|.|.+|+|+.-|-+
T Consensus 73 ~~~~~~FA~S~~~~~~Wi~~mN~ 95 (104)
T PF15408_consen 73 RRHVQCFASSKKVCQSWIQVMNS 95 (104)
T ss_pred cchhhhhhhHHHHHHHHHHHhcC
Confidence 46788999999999999987754
No 85
>PF15409 PH_8: Pleckstrin homology domain
Probab=21.08 E-value=80 Score=23.35 Aligned_cols=21 Identities=38% Similarity=0.461 Sum_probs=17.8
Q ss_pred HHhhcCCChHHHHHHHHHHHH
Q psy14437 113 EMLLLAPSTDDQKLWVQRLSK 133 (160)
Q Consensus 113 ~lLlla~s~eeq~~WVs~L~k 133 (160)
=.=|-|.|++|=+.||+.|.+
T Consensus 67 i~hLKa~s~~~f~~Wv~aL~~ 87 (89)
T PF15409_consen 67 IWHLKAKSQEDFQRWVSALQK 87 (89)
T ss_pred EEEEEcCCHHHHHHHHHHHHh
Confidence 455789999999999999864
Done!