BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1444
(71 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13822|SANT_PLAFP S-antigen protein (Fragment) OS=Plasmodium falciparum (isolate
Palo Alto / Uganda) PE=4 SV=1
Length = 76
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 4 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 60
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 12 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 68
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRD 65
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ D
Sbjct: 20 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGD 73
>sp|P13821|SANT_PLAFW S-antigen protein OS=Plasmodium falciparum (isolate Wellcome) PE=4
SV=1
Length = 640
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 91 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 147
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 99 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 155
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 107 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 163
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 115 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 171
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 123 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 179
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 131 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 187
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 139 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 195
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 147 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 203
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 155 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 211
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 163 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 219
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 171 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 227
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 179 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 235
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 187 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 243
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 195 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 251
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 203 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 259
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 211 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 267
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 219 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 275
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 227 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 235 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 291
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 243 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 251 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 307
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 259 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 315
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 267 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 323
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 275 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 331
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 283 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 339
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 291 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 347
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 299 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 355
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 307 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 363
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 315 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 323 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 379
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 331 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 387
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 339 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 395
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 347 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 403
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 355 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 411
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 363 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 419
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 371 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 427
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 379 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 435
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 387 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 443
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 395 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 451
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 403 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 459
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 411 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 467
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 419 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 475
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 427 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 483
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 435 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 491
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 443 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 499
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 451 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 507
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 459 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 515
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 467 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 523
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 475 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 531
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 483 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 539
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 491 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 547
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 499 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 555
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 507 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 563
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 515 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 571
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 523 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 579
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 531 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 587
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 539 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 595
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 547 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 603
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 555 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 611
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 18 KGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
+GP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP ++ DKGP
Sbjct: 89 EGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGP 139
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRA 62
P +D +KGP +D DKGP ++ DKGP +D DKGP +D DKGP ++ DKGP +
Sbjct: 563 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNS 613
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKAD 47
P +D +KGP +D DKGP ++ DKGP +D DKGP +D
Sbjct: 579 PNSDGDKGPNSDGDKGPNSDGDKGPNSDGDKGPNSD 614
>sp|A2VD00|EIF3A_XENLA Eukaryotic translation initiation factor 3 subunit A OS=Xenopus
laevis GN=eif3a PE=2 SV=1
Length = 1424
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1002 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1061
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1062 GLDEDRGP 1069
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1012 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1071
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1072 GFDEDRGP 1079
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1022 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRR 1081
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1082 GFDEDRGP 1089
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1032 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRR 1091
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1092 DFDEDRGP 1099
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1042 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRR 1101
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1102 GFDEDRGP 1109
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1052 GLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRR 1111
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1112 GFDEDRGP 1119
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1082 GFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRR 1141
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1142 GFDDDRGP 1149
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1072 GFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRR 1131
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1132 GFDDDRGP 1139
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR D+GPR
Sbjct: 1102 GFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGFEDDRGPRR 1161
Query: 62 -ANRDKGP 68
D+GP
Sbjct: 1162 GFEDDRGP 1169
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 12/62 (19%)
Query: 19 GPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR--ANRDK 66
GPR + D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR + D+
Sbjct: 988 GPRRGFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDR 1047
Query: 67 GP 68
GP
Sbjct: 1048 GP 1049
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 12/67 (17%)
Query: 14 ADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR-- 61
D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1093 FDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRG 1152
Query: 62 ANRDKGP 68
D+GP
Sbjct: 1153 FEDDRGP 1159
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 8/47 (17%)
Query: 29 GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR--ANRDKG 67
GA D+GPR A+ D+GP+ A+ D+GPR A D+GPR A D+G
Sbjct: 1213 GAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRG 1259
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 8/47 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKG 51
GA+ ++GPR A+ D+GP GA D+GPR A+ D+GP+ A+ D+G
Sbjct: 1213 GAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRG 1259
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 23/79 (29%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR-------------ADRDKGPK--ADRDKGPR 53
G + ++GPR D D+ P G D+GPR A+ D+GP+ A+ D+GPR
Sbjct: 1172 GFEDDRGPRRGFDEDRTPRRGFEDDRGPRRGMDEERVSWRGGAEEDRGPRRGAEEDRGPR 1231
Query: 54 --ANRDKGPR--ANRDKGP 68
A D+GPR A D+GP
Sbjct: 1232 RGAEEDRGPRRGAEEDRGP 1250
>sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B OS=Danio rerio GN=nipblb PE=2 SV=1
Length = 2876
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 15 DRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDK 66
DR+K DRDK +RDK DRDK + DR+K +RDKG +RDK
Sbjct: 849 DRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDK 900
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 15 DRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKG 67
DR+K DRDK +RDK DRDK + DRDK +R+K +RDKG
Sbjct: 841 DRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKG 893
Score = 36.2 bits (82), Expect = 0.066, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 15 DRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDK 66
DR+K DRDK +RDK DR+K + DRDKG +RDK R+K
Sbjct: 857 DRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREK 908
Score = 33.9 bits (76), Expect = 0.26, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 27/49 (55%)
Query: 18 KGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDK 66
KG DRDK +RDK DRDK + DRDK +RDK +R+K
Sbjct: 836 KGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREK 884
Score = 33.1 bits (74), Expect = 0.47, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 15 DRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDK 66
DR+K DRDK +R+K DRDKG + DRDK R+K R K
Sbjct: 865 DRDKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLK 916
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 5 RKREKSMPGA---DRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPR 61
+ R+K M A D++K R+K +KG DRDK + DRDK +RDK
Sbjct: 804 KDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVRE 863
Query: 62 ANRDK 66
+RDK
Sbjct: 864 KDRDK 868
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 18 KGPRADRD----KGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDK 66
KG D+D KG +RDK DRDK DRDK +RDK +RDK
Sbjct: 824 KGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDK 876
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 15 DRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDK 66
DR+K DR+K +RDKG DRDK R+K R K R+K
Sbjct: 873 DRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKEREK 924
>sp|A4II09|EIF3A_XENTR Eukaryotic translation initiation factor 3 subunit A OS=Xenopus
tropicalis GN=eif3a PE=2 SV=1
Length = 1391
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+ P+ D D+GPR + D+GPR
Sbjct: 1030 GFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRR 1089
Query: 62 -ANRDKGP 68
+ D+GP
Sbjct: 1090 GFDEDRGP 1097
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+ PR D D+GP+ D D+GPR + D+GPR
Sbjct: 1040 GFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRR 1099
Query: 62 -ANRDKGP 68
D+GP
Sbjct: 1100 GFEDDRGP 1107
>sp|Q14152|EIF3A_HUMAN Eukaryotic translation initiation factor 3 subunit A OS=Homo sapiens
GN=EIF3A PE=1 SV=1
Length = 1382
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 13 GADRNKGPR--ADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GP A+ D+ PR
Sbjct: 1072 GLDDDRGPRRGMDDDRGPRRGMDDDRGPRRGMDDDRGPRRGLDDDRGPWRNADDDRIPRR 1131
Query: 62 -ANRDKGPGAN 71
A D+GP N
Sbjct: 1132 GAEDDRGPWRN 1142
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 13 GAD--RNKGPRADRDKGP--GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR- 61
GAD R+ AD D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1052 GADDERSSWRNADDDRGPRRGLDDDRGPRRGMDDDRGPRRGMDDDRGPRRGMDDDRGPRR 1111
Query: 62 -ANRDKGPGAN 71
+ D+GP N
Sbjct: 1112 GLDDDRGPWRN 1122
>sp|P12111|CO6A3_HUMAN Collagen alpha-3(VI) chain OS=Homo sapiens GN=COL6A3 PE=1 SV=5
Length = 3177
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 8 EKSMPGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANR-DKGPRA--NR 64
EK PG +KGPR ++ G D G R D + +++GP+ D GP R
Sbjct: 2129 EKGNPGRRGDKGPRGEK----GERGDVGIRGDPGNPGQDSQERGPKGETGDLGPMGVPGR 2184
Query: 65 DKGPGA 70
D PG
Sbjct: 2185 DGVPGG 2190
>sp|B6IN79|RS6_RHOCS 30S ribosomal protein S6 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rpsF PE=3 SV=1
Length = 163
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 1 MTC-SRKREKSMPGADRNKGPRADRDKGP-GANRDKGPRADR-DKGPKADR-DKGPRANR 56
MT K E+ NKG R++R GP G D+GPR D D+GP+ D D+GPR +
Sbjct: 89 MTVKVEKIEEGQTAMLTNKGERSER--GPRGGFGDRGPRRDFGDRGPRRDFGDRGPRRDG 146
Query: 57 DKGPRAN--RDKGPG 69
D GPRA R++G G
Sbjct: 147 D-GPRAEGGRNEGEG 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,243,955
Number of Sequences: 539616
Number of extensions: 1328273
Number of successful extensions: 9490
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 158
Number of HSP's that attempted gapping in prelim test: 6851
Number of HSP's gapped (non-prelim): 1914
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)