Query psy1444
Match_columns 71
No_of_seqs 7 out of 9
Neff 2.5
Searched_HMMs 13730
Date Fri Aug 16 19:54:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1444.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1444hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vq0a2 g.81.1.1 (A:231-287) H 2.6 1.8E+02 0.013 14.7 0.2 6 2-7 2-7 (57)
2 d1xjha_ g.81.1.1 (A:) HSP33, C 2.2 2.1E+02 0.016 14.4 0.2 6 2-7 8-13 (62)
3 d1xtoa_ d.157.1.6 (A:) Coenzym 2.1 2.9E+02 0.021 15.3 0.8 12 3-14 24-35 (304)
4 d1mb6a_ g.3.6.2 (A:) Huwentoxi 1.9 1.7E+02 0.013 14.6 -0.4 6 2-7 23-28 (35)
5 d1vzya2 g.81.1.1 (A:234-290) H 1.9 2.7E+02 0.019 13.8 0.2 6 2-7 3-8 (57)
6 d2aw0a_ d.58.17.1 (A:) Menkes 1.8 2.7E+02 0.02 13.7 0.3 4 1-4 12-15 (72)
7 d1tdha3 g.39.1.8 (A:247-290) E 1.8 3.9E+02 0.029 13.7 0.9 7 32-38 37-43 (44)
8 d2ggpb1 d.58.17.1 (B:1-72) Cop 1.8 2.8E+02 0.02 13.8 0.2 4 1-4 11-14 (72)
9 d1g47a1 g.39.1.3 (A:1-35) Pinc 1.7 3.3E+02 0.024 13.4 0.5 12 1-12 8-19 (35)
10 d2qifa1 d.58.17.1 (A:1-69) Cop 1.7 3E+02 0.022 13.4 0.3 4 1-4 11-14 (69)
No 1
>d1vq0a2 g.81.1.1 (A:231-287) HSP33, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=2.56 E-value=1.8e+02 Score=14.65 Aligned_cols=6 Identities=33% Similarity=1.165 Sum_probs=3.3
Q ss_pred cchhhh
Q psy1444 2 TCSRKR 7 (71)
Q Consensus 2 ~~~~~~ 7 (71)
+||+.|
T Consensus 2 ~CS~er 7 (57)
T d1vq0a2 2 DCNREK 7 (57)
T ss_dssp CCCHHH
T ss_pred cCCHHH
Confidence 466554
No 2
>d1xjha_ g.81.1.1 (A:) HSP33, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=2.22 E-value=2.1e+02 Score=14.44 Aligned_cols=6 Identities=83% Similarity=1.486 Sum_probs=3.2
Q ss_pred cchhhh
Q psy1444 2 TCSRKR 7 (71)
Q Consensus 2 ~~~~~~ 7 (71)
+||+.|
T Consensus 8 ~CS~er 13 (62)
T d1xjha_ 8 TCSRER 13 (62)
T ss_dssp SSCHHH
T ss_pred CCCHHH
Confidence 456554
No 3
>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]}
Probab=2.12 E-value=2.9e+02 Score=15.29 Aligned_cols=12 Identities=17% Similarity=0.545 Sum_probs=5.9
Q ss_pred chhhhhccCCCC
Q psy1444 3 CSRKREKSMPGA 14 (71)
Q Consensus 3 ~~~~~~~~gP~~ 14 (71)
|...|+...|..
T Consensus 24 C~~ar~~~~p~~ 35 (304)
T d1xtoa_ 24 CKGYRDGTLKAT 35 (304)
T ss_dssp HHHHHTTCSCCC
T ss_pred cchhhcCCCCCC
Confidence 445555555543
No 4
>d1mb6a_ g.3.6.2 (A:) Huwentoxin-IV {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]}
Probab=1.95 E-value=1.7e+02 Score=14.55 Aligned_cols=6 Identities=67% Similarity=1.187 Sum_probs=3.9
Q ss_pred cchhhh
Q psy1444 2 TCSRKR 7 (71)
Q Consensus 2 ~~~~~~ 7 (71)
.||||.
T Consensus 23 vcsrk~ 28 (35)
T d1mb6a_ 23 VCSRKT 28 (35)
T ss_dssp EEETTT
T ss_pred eEeccc
Confidence 477763
No 5
>d1vzya2 g.81.1.1 (A:234-290) HSP33, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=1.86 E-value=2.7e+02 Score=13.83 Aligned_cols=6 Identities=50% Similarity=1.243 Sum_probs=3.1
Q ss_pred cchhhh
Q psy1444 2 TCSRKR 7 (71)
Q Consensus 2 ~~~~~~ 7 (71)
+||+.|
T Consensus 3 ~Cs~er 8 (57)
T d1vzya2 3 PCSKER 8 (57)
T ss_dssp CCCHHH
T ss_pred CCCHHH
Confidence 355554
No 6
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.84 E-value=2.7e+02 Score=13.68 Aligned_cols=4 Identities=75% Similarity=1.597 Sum_probs=0.0
Q ss_pred Ccch
Q psy1444 1 MTCS 4 (71)
Q Consensus 1 ~~~~ 4 (71)
|+|+
T Consensus 12 M~C~ 15 (72)
T d2aw0a_ 12 MTCN 15 (72)
T ss_dssp CCSH
T ss_pred cccH
No 7
>d1tdha3 g.39.1.8 (A:247-290) Endonuclease VIII-like 1 (NEIL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.81 E-value=3.9e+02 Score=13.69 Aligned_cols=7 Identities=57% Similarity=0.833 Sum_probs=0.0
Q ss_pred CCCCCCC
Q psy1444 32 RDKGPRA 38 (71)
Q Consensus 32 ~d~GP~~ 38 (71)
.++||++
T Consensus 37 GdpGPla 43 (44)
T d1tdha3 37 GDPGPLA 43 (44)
T ss_dssp SCCCTTC
T ss_pred CCCCCCC
No 8
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=1.77 E-value=2.8e+02 Score=13.75 Aligned_cols=4 Identities=100% Similarity=1.705 Sum_probs=0.0
Q ss_pred Ccch
Q psy1444 1 MTCS 4 (71)
Q Consensus 1 ~~~~ 4 (71)
|+|.
T Consensus 11 M~C~ 14 (72)
T d2ggpb1 11 MTCS 14 (72)
T ss_dssp CCSS
T ss_pred cccH
No 9
>d1g47a1 g.39.1.3 (A:1-35) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.71 E-value=3.3e+02 Score=13.38 Aligned_cols=12 Identities=33% Similarity=0.565 Sum_probs=0.0
Q ss_pred CcchhhhhccCC
Q psy1444 1 MTCSRKREKSMP 12 (71)
Q Consensus 1 ~~~~~~~~~~gP 12 (71)
|.|+|-+.--.|
T Consensus 8 ~~C~RC~~gF~p 19 (35)
T d1g47a1 8 ATCERCKGGFAP 19 (35)
T ss_dssp CBCSSSCCBCCS
T ss_pred HHHHHHccCCCc
No 10
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=1.68 E-value=3e+02 Score=13.40 Aligned_cols=4 Identities=50% Similarity=1.456 Sum_probs=0.0
Q ss_pred Ccch
Q psy1444 1 MTCS 4 (71)
Q Consensus 1 ~~~~ 4 (71)
|+|+
T Consensus 11 m~C~ 14 (69)
T d2qifa1 11 MSCQ 14 (69)
T ss_dssp CCSH
T ss_pred ccCH
Done!