Your job contains 1 sequence.
>psy1444
MTCSRKREKSMPGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGP
RANRDKGPGAN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1444
(71 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0003861 - symbol:trp "transient receptor potential... 144 1.3e-08 1
UNIPROTKB|A2VD00 - symbol:eif3a "Eukaryotic translation i... 130 4.6e-07 1
UNIPROTKB|A4II09 - symbol:eif3a "Eukaryotic translation i... 113 2.9e-05 1
UNIPROTKB|F5H335 - symbol:EIF3A "Eukaryotic translation i... 112 3.6e-05 1
UNIPROTKB|Q14152 - symbol:EIF3A "Eukaryotic translation i... 112 3.7e-05 1
FB|FBgn0051921 - symbol:CG31921 species:7227 "Drosophila ... 108 4.5e-05 1
UNIPROTKB|B3P211 - symbol:eIF3-S10 "Eukaryotic translatio... 110 4.8e-05 1
FB|FBgn0046214 - symbol:vig2 "vig2" species:7227 "Drosoph... 103 8.2e-05 1
UNIPROTKB|Q96A59 - symbol:MARVELD3 "MARVEL domain-contain... 100 0.00015 1
DICTYBASE|DDB_G0284459 - symbol:DDB_G0284459 species:4468... 105 0.00018 1
DICTYBASE|DDB_G0288797 - symbol:fip1l1 "cleavage and poly... 101 0.00019 1
UNIPROTKB|B4NIC3 - symbol:eIF3-S10 "Eukaryotic translatio... 103 0.00027 1
ZFIN|ZDB-GENE-030131-5726 - symbol:eif3s10 "eukaryotic tr... 103 0.00030 1
UNIPROTKB|E1BSS3 - symbol:EIF3A "Uncharacterized protein"... 102 0.00042 1
FB|FBgn0037249 - symbol:eIF3-S10 "eIF3-S10" species:7227 ... 101 0.00044 1
UNIPROTKB|B4PTS9 - symbol:eIF3-S10 "Eukaryotic translatio... 99 0.00072 1
UNIPROTKB|B4I3P3 - symbol:eIF3-S10 "Eukaryotic translatio... 99 0.00072 1
UNIPROTKB|B4QVI2 - symbol:eIF3-S10 "Eukaryotic translatio... 99 0.00072 1
>FB|FBgn0003861 [details] [associations]
symbol:trp "transient receptor potential" species:7227
"Drosophila melanogaster" [GO:0016028 "rhabdomere"
evidence=NAS;IDA;TAS] [GO:0050908 "detection of light stimulus
involved in visual perception" evidence=IMP] [GO:0005262 "calcium
channel activity" evidence=ISS;IMP] [GO:0009416 "response to light
stimulus" evidence=IMP;TAS] [GO:0006816 "calcium ion transport"
evidence=ISS;IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008086 "light-activated voltage-gated calcium channel
activity" evidence=NAS;IMP] [GO:0035997 "rhabdomere microvillus
membrane" evidence=IDA] [GO:0007603 "phototransduction, visible
light" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0008377 "light-induced release of
internally sequestered calcium ion" evidence=IDA] [GO:0015279
"store-operated calcium channel activity" evidence=NAS;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0019722
"calcium-mediated signaling" evidence=TAS] [GO:0008087
"light-activated voltage-gated calcium channel complex"
evidence=NAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007602 "phototransduction" evidence=NAS]
[GO:0070588 "calcium ion transmembrane transport" evidence=IMP]
[GO:0071454 "cellular response to anoxia" evidence=IGI] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0016027 "inaD signaling complex"
evidence=TAS;IPI] [GO:0005218 "intracellular ligand-gated calcium
channel activity" evidence=NAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030845 "phospholipase C-inhibiting G-protein
coupled receptor signaling pathway" evidence=IMP] [GO:0050962
"detection of light stimulus involved in sensory perception"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007605 "sensory perception of sound" evidence=IMP]
InterPro:IPR002110 InterPro:IPR002153 InterPro:IPR004729
InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520 PRINTS:PR01097
PROSITE:PS50088 SMART:SM00248 EMBL:AE014297 GO:GO:0016021
GO:GO:0008355 GO:GO:0008104 GO:GO:0019722 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005516
GO:GO:0007605 GO:GO:0007608 GO:GO:0050908 GO:GO:0071454
GO:GO:0015279 GO:GO:0016027 GO:GO:0005218 GO:GO:0030845
GO:GO:0008377 InterPro:IPR013555 PANTHER:PTHR10117 Pfam:PF08344
TIGRFAMs:TIGR00870 GeneTree:ENSGT00680000099866 KO:K05328
EMBL:M34394 EMBL:M21306 EMBL:BT009947 EMBL:M18634 PIR:JN0015
PIR:JU0092 RefSeq:NP_476768.1 UniGene:Dm.21694
ProteinModelPortal:P19334 SMR:P19334 IntAct:P19334 STRING:P19334
TCDB:1.A.4.1.1 PaxDb:P19334 PRIDE:P19334 EnsemblMetazoa:FBtr0085513
GeneID:43542 KEGG:dme:Dmel_CG7875 CTD:43542 FlyBase:FBgn0003861
eggNOG:NOG311539 InParanoid:P19334 OMA:HIFSINP OrthoDB:EOG4Z613F
PhylomeDB:P19334 ChiTaRS:trp GenomeRNAi:43542 NextBio:834457
Bgee:P19334 GermOnline:CG7875 Uniprot:P19334
Length = 1275
Score = 144 (55.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 6 KREKSMPGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRD 65
K + PG D++K P D+DK P N DK P D+DK P D+DK P ++DK P ++D
Sbjct: 1169 KDKDKKPGDDKDKKPGDDKDKKPADNNDKKPADDKDKKPGDDKDKKPGDDKDKKPSDDKD 1228
Query: 66 KGP 68
K P
Sbjct: 1229 KKP 1231
Score = 137 (53.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 12 PGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGPGA 70
PG D++K P + DK P ++DK P D+DK P D+DK P ++DK P ++DK P A
Sbjct: 1183 PGDDKDKKPADNNDKKPADDKDKKPGDDKDKKPGDDKDKKPSDDKDKKPADDKDKKPAA 1241
Score = 123 (48.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 4 SRKREKSMPGADRNKGPRA-DRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRA 62
S E D G A D+DK PG ++DK P D+DK P + DK P ++DK P
Sbjct: 1150 SGPEEPKKAAGDSKPGDDAKDKDKKPGDDKDKKPGDDKDKKPADNNDKKPADDKDKKPGD 1209
Query: 63 NRDKGPG 69
++DK PG
Sbjct: 1210 DKDKKPG 1216
Score = 112 (44.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 6 KREKSMPGADRNKGPRADRDKGPGA-NRDKGPRADRDKGPKADRDKGPRANRDKGPRANR 64
K ++ G + K D G A ++DK P D+DK P D+DK P N DK P ++
Sbjct: 1144 KPDEKKSGPEEPKKAAGDSKPGDDAKDKDKKPGDDKDKKPGDDKDKKPADNNDKKPADDK 1203
Query: 65 DKGPG 69
DK PG
Sbjct: 1204 DKKPG 1208
>UNIPROTKB|A2VD00 [details] [associations]
symbol:eif3a "Eukaryotic translation initiation factor 3
subunit A" species:8355 "Xenopus laevis" [GO:0001732 "formation of
translation initiation complex" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0003743
GO:GO:0005852 KO:K03254 HAMAP:MF_03000 HOVERGEN:HBG006128
GO:GO:0001732 EMBL:BC129055 RefSeq:NP_001085285.1 UniGene:Xl.57279
PRIDE:A2VD00 GeneID:443632 KEGG:xla:443632 Uniprot:A2VD00
Length = 1424
Score = 130 (50.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRAN--RDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1042 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRR 1101
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1102 GFDEDRGP 1109
Score = 130 (50.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1032 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRR 1091
Query: 63 N--RDKGP 68
+ D+GP
Sbjct: 1092 DFDEDRGP 1099
Score = 130 (50.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1022 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRR 1081
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1082 GFDEDRGP 1089
Score = 130 (50.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1012 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1071
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1072 GFDEDRGP 1079
Score = 130 (50.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1002 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1061
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1062 GLDEDRGP 1069
Score = 129 (50.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRAD--RDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1062 GLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRR 1121
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1122 GFDEDRGP 1129
Score = 129 (50.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKAD--RDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1052 GLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRR 1111
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1112 GFDEDRGP 1119
Score = 124 (48.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRAD--RDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1082 GFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRR 1141
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1142 GFDDDRGP 1149
Score = 122 (48.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G + ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 992 GFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1051
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1052 GLDEDRGP 1059
Score = 119 (46.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 13 GADRNKGPRA--DRDKGPGAN--RDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1072 GFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRR 1131
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1132 GFDDDRGP 1139
Score = 118 (46.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRAN--RDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR D+GPR
Sbjct: 1102 GFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGFEDDRGPRR 1161
Query: 63 N--RDKGP 68
D+GP
Sbjct: 1162 GFEDDRGP 1169
Score = 117 (46.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 15 DRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRAN- 63
D ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1094 DEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGF 1153
Query: 64 -RDKGP 68
D+GP
Sbjct: 1154 EDDRGP 1159
Score = 111 (44.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G + GPR + D+GP G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 982 GFNDEPGPRRGFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1041
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1042 GLDEDRGP 1049
Score = 109 (43.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 13 GADRNKGPRADRDKGP-----GANRDKGPR--ADRDKGPK--ADRDKGPR--ANRDKGPR 61
G + ++GPR D+ GA D+GPR A+ D+GP+ A+ D+GPR A D+GPR
Sbjct: 1192 GFEDDRGPRRGMDEERVSWRGGAEEDRGPRRGAEEDRGPRRGAEEDRGPRRGAEEDRGPR 1251
Query: 62 --ANRDKG 67
A D+G
Sbjct: 1252 RGAEEDRG 1259
Score = 105 (42.0 bits), Expect = 0.00021, P = 0.00021
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 6 KREKSMPGADRNKGPR--ADRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--N 55
+R S G D ++GP+ + D GP G N + GPR + D+GP+ D D+GPR +
Sbjct: 956 ERAASWRGTD-DRGPKRSVEEDGGPRRGFNDEPGPRRGFEDDQGPRRGLDEDRGPRRGLD 1014
Query: 56 RDKGPRA--NRDKGP 68
D+GPR + D+GP
Sbjct: 1015 EDRGPRRGLDEDRGP 1029
Score = 102 (41.0 bits), Expect = 0.00044, P = 0.00044
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRAN--RDKGPRA 62
G D ++GPR D D+GP G + D+GPR + D+GP+ + D+GPR D+GPR
Sbjct: 1122 GFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRR 1181
Query: 63 NRDK 66
D+
Sbjct: 1182 GFDE 1185
Score = 101 (40.6 bits), Expect = 0.00056, P = 0.00056
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 15 DRNKGPRADRDKGPGANR----DKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA-- 62
+ + GPR + PG R D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 974 EEDGGPRRGFNDEPGPRRGFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGL 1033
Query: 63 NRDKGP 68
+ D+GP
Sbjct: 1034 DEDRGP 1039
>UNIPROTKB|A4II09 [details] [associations]
symbol:eif3a "Eukaryotic translation initiation factor 3
subunit A" species:8364 "Xenopus (Silurana) tropicalis" [GO:0001732
"formation of translation initiation complex" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0003743 GO:GO:0005852 eggNOG:NOG236708 HOGENOM:HOG000246822
KO:K03254 HAMAP:MF_03000 HOVERGEN:HBG006128 GO:GO:0001732 CTD:8661
EMBL:BC135790 RefSeq:NP_001096173.1 UniGene:Str.55518 STRING:A4II09
PRIDE:A4II09 GeneID:100124719 KEGG:xtr:100124719
Xenbase:XB-GENE-994394 Uniprot:A4II09
Length = 1391
Score = 113 (44.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+ P+ D D+GPR + D+GPR
Sbjct: 1030 GFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRR 1089
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1090 GFDEDRGP 1097
Score = 111 (44.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+ PR D D+GP+ D D+GPR + D+GPR
Sbjct: 1040 GFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRR 1099
Query: 63 N--RDKGP 68
D+GP
Sbjct: 1100 GFEDDRGP 1107
Score = 110 (43.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP+ D D+ PR + D+GPR
Sbjct: 1020 GFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRR 1079
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1080 GFDDDRGP 1087
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRAN--RDKGPRA 62
G D ++GPR D D+GP G + D+GPR + D+GP+ + D+GPR D+GPR
Sbjct: 1070 GFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRR 1129
Query: 63 N--RDKGP 68
D+GP
Sbjct: 1130 GFEDDRGP 1137
Score = 105 (42.0 bits), Expect = 0.00021, P = 0.00021
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRAN--RDKGPRA 62
G D ++GPR D D+GP G D+GPR + D+GP+ + D+GPR D+GPR
Sbjct: 1080 GFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRR 1139
Query: 63 N--RDKGP 68
D+GP
Sbjct: 1140 GFEDDRGP 1147
Score = 105 (42.0 bits), Expect = 0.00021, P = 0.00021
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 8 EK-SMPGADRNKGPR-ADRDKGP--GANRDKGPRAD-RDKGPKA--DRDKGPRAN--RDK 58
EK S+P AD KG D D+GP G D+GPR D GP+ + D+GPR D+
Sbjct: 956 EKVSLPDADEEKGGSWRDEDRGPKRGLEEDRGPRRGIDDAGPRRGFEEDRGPRRGIEDDR 1015
Query: 59 GPRA--NRDKGP 68
PR + D+GP
Sbjct: 1016 APRRGFDDDRGP 1027
Score = 104 (41.7 bits), Expect = 0.00026, P = 0.00026
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRAN--RDKGPRA 62
G D ++ PR D D+GP G + D+GPR D D+GP+ + D+GPR D+GPR
Sbjct: 1060 GFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRR 1119
Query: 63 N--RDKGP 68
D+GP
Sbjct: 1120 GFEDDRGP 1127
Score = 101 (40.6 bits), Expect = 0.00055, P = 0.00055
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G + ++ PR D D+GP G + D+GPR D D+GP+ D D+GPR + D+ PR
Sbjct: 1010 GIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRR 1069
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1070 GFDDDRGP 1077
Score = 99 (39.9 bits), Expect = 0.00090, P = 0.00090
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G + ++GPR + D+ P G + D+GPR D D+GP+ D D+GPR + D+GPR
Sbjct: 1000 GFEEDRGPRRGIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRR 1059
Query: 63 NRDK 66
D+
Sbjct: 1060 GFDE 1063
Score = 99 (39.9 bits), Expect = 0.00090, P = 0.00090
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKGPRA 62
G D + GPR + D+GP G D+ PR D D+GP+ D D+GPR + D+GPR
Sbjct: 991 GID-DAGPRRGFEEDRGPRRGIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRR 1049
Query: 63 --NRDKGP 68
+ D+GP
Sbjct: 1050 GIDDDRGP 1057
>UNIPROTKB|F5H335 [details] [associations]
symbol:EIF3A "Eukaryotic translation initiation factor 3
subunit A" species:9606 "Homo sapiens" [GO:0001732 "formation of
translation initiation complex" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
GO:GO:0005730 GO:GO:0003743 GO:GO:0005852 GO:GO:0001732
EMBL:AL355598 HGNC:HGNC:3271 ChiTaRS:EIF3A IPI:IPI01014951
ProteinModelPortal:F5H335 Ensembl:ENST00000541549
ArrayExpress:F5H335 Bgee:F5H335 Uniprot:F5H335
Length = 1348
Score = 112 (44.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 13 GAD--RNKGPRADRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRANRD--KGPRA 62
GAD R+ AD D+GP G + D+GPR D D+GP+ D D+GPR D +GPR
Sbjct: 1018 GADDERSSWRNADDDRGPRRGLDDDRGPRRGMDDDRGPRRGMDDDRGPRRGMDDDRGPRR 1077
Query: 63 --NRDKGPGAN 71
+ D+GP N
Sbjct: 1078 GLDDDRGPWRN 1088
Score = 110 (43.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 10 SMPGADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKG 59
S AD ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+G
Sbjct: 1025 SWRNADDDRGPRRGLDDDRGPRRGMDDDRGPRRGMDDDRGPRRGMDDDRGPRRGLDDDRG 1084
Query: 60 PRANRD 65
P N D
Sbjct: 1085 PWRNAD 1090
Score = 107 (42.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGP--KADRDKGPR--ANRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP AD D+ PR A D+GP
Sbjct: 1048 GMDDDRGPRRGMDDDRGPRRGMDDDRGPRRGLDDDRGPWRNADDDRIPRRGAEDDRGPWR 1107
Query: 63 NRD 65
N D
Sbjct: 1108 NMD 1110
>UNIPROTKB|Q14152 [details] [associations]
symbol:EIF3A "Eukaryotic translation initiation factor 3
subunit A" species:9606 "Homo sapiens" [GO:0005198 "structural
molecule activity" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0001732 "formation of translation initiation
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006413 "translational initiation" evidence=IC;TAS] [GO:0003743
"translation initiation factor activity" evidence=IC;IDA]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 Reactome:REACT_17015
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
GO:GO:0005730 Pathway_Interaction_DB:mtor_4pathway GO:GO:0005198
EMBL:CH471066 GO:GO:0003743 Pathway_Interaction_DB:il2_pi3kpathway
GO:GO:0005852 eggNOG:NOG236708 HOGENOM:HOG000246822 KO:K03254
OMA:QDRDEND HAMAP:MF_03000 HOVERGEN:HBG006128 GO:GO:0001732
EMBL:U58046 EMBL:U58047 EMBL:U78311 EMBL:D50929 EMBL:AL355598
IPI:IPI00029012 RefSeq:NP_003741.1 UniGene:Hs.523299
ProteinModelPortal:Q14152 DIP:DIP-31114N IntAct:Q14152
MINT:MINT-1519859 STRING:Q14152 PhosphoSite:Q14152 DMDM:6685537
UCD-2DPAGE:Q14152 PaxDb:Q14152 PeptideAtlas:Q14152 PRIDE:Q14152
Ensembl:ENST00000369144 GeneID:8661 KEGG:hsa:8661 UCSC:uc001ldu.3
CTD:8661 GeneCards:GC10M120794 H-InvDB:HIX0170434 HGNC:HGNC:3271
HPA:HPA038315 HPA:HPA038316 MIM:602039 neXtProt:NX_Q14152
PharmGKB:PA27699 InParanoid:Q14152 OrthoDB:EOG4B2SWM
PhylomeDB:Q14152 Reactome:REACT_1762 ChiTaRS:EIF3A GenomeRNAi:8661
NextBio:32483 ArrayExpress:Q14152 Bgee:Q14152 CleanEx:HS_EIF3A
Genevestigator:Q14152 GermOnline:ENSG00000107581 Uniprot:Q14152
Length = 1382
Score = 112 (44.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 13 GAD--RNKGPRADRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRANRD--KGPRA 62
GAD R+ AD D+GP G + D+GPR D D+GP+ D D+GPR D +GPR
Sbjct: 1052 GADDERSSWRNADDDRGPRRGLDDDRGPRRGMDDDRGPRRGMDDDRGPRRGMDDDRGPRR 1111
Query: 63 --NRDKGPGAN 71
+ D+GP N
Sbjct: 1112 GLDDDRGPWRN 1122
Score = 110 (43.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 10 SMPGADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGPKA--DRDKGPRA--NRDKG 59
S AD ++GPR D D+GP G + D+GPR D D+GP+ D D+GPR + D+G
Sbjct: 1059 SWRNADDDRGPRRGLDDDRGPRRGMDDDRGPRRGMDDDRGPRRGMDDDRGPRRGLDDDRG 1118
Query: 60 PRANRD 65
P N D
Sbjct: 1119 PWRNAD 1124
Score = 107 (42.7 bits), Expect = 0.00013, P = 0.00013
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 13 GADRNKGPRA--DRDKGP--GANRDKGPRA--DRDKGP--KADRDKGPR--ANRDKGPRA 62
G D ++GPR D D+GP G + D+GPR D D+GP AD D+ PR A D+GP
Sbjct: 1082 GMDDDRGPRRGMDDDRGPRRGMDDDRGPRRGLDDDRGPWRNADDDRIPRRGAEDDRGPWR 1141
Query: 63 NRD 65
N D
Sbjct: 1142 NMD 1144
>FB|FBgn0051921 [details] [associations]
symbol:CG31921 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:AE014134 GeneTree:ENSGT00690000102194
eggNOG:NOG263486 RefSeq:NP_722627.1 UniGene:Dm.29210
ProteinModelPortal:Q8IPV8 PRIDE:Q8IPV8 EnsemblMetazoa:FBtr0078096
GeneID:319027 KEGG:dme:Dmel_CG31921 UCSC:CG31921-RA
FlyBase:FBgn0051921 InParanoid:Q8IPV8 OMA:RMCHREY OrthoDB:EOG408KQ9
PhylomeDB:Q8IPV8 GenomeRNAi:319027 NextBio:847014
ArrayExpress:Q8IPV8 Bgee:Q8IPV8 Uniprot:Q8IPV8
Length = 713
Score = 108 (43.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 5 RKREKSMPGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANR 64
+++EK G D+ K ++DKG +DK AD DKG D DKG +DK +
Sbjct: 405 KEKEKDK-GKDKVKDNEKEKDKGKDKVKDKDKDADTDKGKSTDEDKGKHNAKDKDKSKEK 463
Query: 65 DKGPGAN 71
DK N
Sbjct: 464 DKNNDTN 470
>UNIPROTKB|B3P211 [details] [associations]
symbol:eIF3-S10 "Eukaryotic translation initiation factor 3
subunit A" species:7220 "Drosophila erecta" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0006446
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003743 EMBL:CH954181
GO:GO:0005852 KO:K03254 HAMAP:MF_03000 OrthoDB:EOG4905QZ
RefSeq:XP_001978826.1 EnsemblMetazoa:FBtr0131619 GeneID:6552153
KEGG:der:Dere_GG11565 FlyBase:FBgn0103862 Uniprot:B3P211
Length = 1135
Score = 110 (43.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 22/42 (52%), Positives = 24/42 (57%)
Query: 16 RNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRD 57
RN GPR DRD GP RD GPR DRD R+ GPR +
Sbjct: 1001 RNDGPRRDRDDGPRRERDDGPRRDRDDERGFRRNDGPRRTEE 1042
Score = 104 (41.7 bits), Expect = 0.00021, P = 0.00021
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 18 KGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKGP 68
+G DRD R+ GPR DRD GP+ +RD GPR +RD R+ GP
Sbjct: 992 RGGERDRDF-----RNDGPRRDRDDGPRRERDDGPRRDRDDERGFRRNDGP 1037
Score = 101 (40.6 bits), Expect = 0.00044, P = 0.00044
Identities = 27/70 (38%), Positives = 34/70 (48%)
Query: 7 REKSMPGADRNKGPRADRDKGPGANRD----KGPRADRD---KGPKADRDKGPRANRDKG 59
R + P + R P+ D +RD +G DRD GP+ DRD GPR RD G
Sbjct: 964 RVRREPDSQRAAAPK---DSNAQQSRDDKWRRGGERDRDFRNDGPRRDRDDGPRRERDDG 1020
Query: 60 PRANRDKGPG 69
PR +RD G
Sbjct: 1021 PRRDRDDERG 1030
>FB|FBgn0046214 [details] [associations]
symbol:vig2 "vig2" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0070828 "heterochromatin
organization" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0051567 "histone H3-K9 methylation" evidence=IMP]
[GO:0005701 "polytene chromosome chromocenter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005703 "polytene
chromosome puff" evidence=IDA] [GO:0031935 "regulation of chromatin
silencing" evidence=IMP] Pfam:PF04774 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0051567 GO:GO:0005703 InterPro:IPR006861
GO:GO:0005701 GO:GO:0070828 GeneTree:ENSGT00520000055591
GO:GO:0031935 UniGene:Dm.7663 GeneID:43016 KEGG:dme:Dmel_CG11844
CTD:43016 FlyBase:FBgn0046214 ChiTaRS:vig2 GenomeRNAi:43016
NextBio:831822 RefSeq:NP_733083.1 IntAct:Q9VBX3 MINT:MINT-851344
STRING:Q9VBX3 EnsemblMetazoa:FBtr0084775 UCSC:CG11844-RB
InParanoid:Q9VBX3 OMA:GYRNDGP PhylomeDB:Q9VBX3 ArrayExpress:Q9VBX3
Bgee:Q9VBX3 Uniprot:Q9VBX3
Length = 443
Score = 103 (41.3 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 7 REKSMPGAD-RNKGPRADRDKGPGANRDKGPRAD---RDKGPKAD--RDKGPRAN--RDK 58
R+ PGA R G R D +G G R+ GPR + R+ GP+ + R++GPR R+
Sbjct: 332 RKGPRPGAGPREGGFRNDGPRGEGGYRNDGPRGEGGYRNDGPRGEGPRNEGPRGEGYRND 391
Query: 59 GPRANRDKGPGAN 71
GPR +GP N
Sbjct: 392 GPRGEGFRGPRFN 404
Score = 100 (40.3 bits), Expect = 0.00017, P = 0.00017
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 13 GADRNKGPRAD---RDKGP---GANRDKGPRAD--RDKGPKAD--RDKGPRANRDKGPRA 62
G RN GPR + R+ GP G R+ GPR + R++GP+ + R+ GPR +GPR
Sbjct: 344 GGFRNDGPRGEGGYRNDGPRGEGGYRNDGPRGEGPRNEGPRGEGYRNDGPRGEGFRGPRF 403
Query: 63 NRDKGP 68
N GP
Sbjct: 404 NN--GP 407
>UNIPROTKB|Q96A59 [details] [associations]
symbol:MARVELD3 "MARVEL domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005923 "tight junction" evidence=IDA]
[GO:0045216 "cell-cell junction organization" evidence=IMP]
InterPro:IPR008253 PROSITE:PS51225 GO:GO:0016021 GO:GO:0005923
EMBL:AC009097 GO:GO:0045216 EMBL:AK056842 EMBL:AK292185
EMBL:BC011893 EMBL:BC013376 IPI:IPI00059270 IPI:IPI00307791
RefSeq:NP_001017967.2 RefSeq:NP_443090.3 UniGene:Hs.513706
UniGene:Hs.733495 ProteinModelPortal:Q96A59 STRING:Q96A59
PhosphoSite:Q96A59 DMDM:209572737 PRIDE:Q96A59 DNASU:91862
Ensembl:ENST00000268485 Ensembl:ENST00000299952 GeneID:91862
KEGG:hsa:91862 UCSC:uc002fat.3 UCSC:uc002fau.3 CTD:91862
GeneCards:GC16P071661 HGNC:HGNC:30525 HPA:HPA043514 MIM:614094
neXtProt:NX_Q96A59 PharmGKB:PA134986126 eggNOG:NOG45280
HOGENOM:HOG000290685 HOVERGEN:HBG081950 OMA:GMVLICI
OrthoDB:EOG4001K4 GenomeRNAi:91862 NextBio:77498 Bgee:Q96A59
CleanEx:HS_MARVELD3 Genevestigator:Q96A59 Uniprot:Q96A59
Length = 401
Score = 100 (40.3 bits), Expect = 0.00015, P = 0.00015
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 6 KREKSMPGADRNKGPR-ADRDKGPGANRDKGPRADRDKGPKADRDKGPR--ANRDKGPRA 62
+R++S G R G R +RD+ NRD+ +R++ + D D+GPR +RD GPRA
Sbjct: 42 RRKRSSDGNRRRDGDRDPERDQERDGNRDRNRDRERERERERDPDRGPRRDTHRDAGPRA 101
>DICTYBASE|DDB_G0284459 [details] [associations]
symbol:DDB_G0284459 species:44689 "Dictyostelium
discoideum" [GO:0005615 "extracellular space" evidence=IDA]
dictyBase:DDB_G0284459 GO:GO:0005615 EMBL:AAFI02000064
RefSeq:XP_638628.1 EnsemblProtists:DDB0218605 GeneID:8624599
KEGG:ddi:DDB_G0284459 eggNOG:NOG294086 OMA:ISERDEY Uniprot:Q54PM6
Length = 1224
Score = 105 (42.0 bits), Expect = 0.00018, P = 0.00018
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 5 RKREKSMPGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANR 64
R R + DR +G R DRD+ ++RD+ DRD+ DRD+G +RD+ +R
Sbjct: 817 RDRGRDRGNGDRGEGDR-DRDRSGRSDRDRDRDRDRDRDRDRDRDRGNDRDRDRDRDRDR 875
Query: 65 DKG 67
D+G
Sbjct: 876 DRG 878
Score = 98 (39.6 bits), Expect = 0.0010, P = 0.00099
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 15 DRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDKG 67
DR++ R+DRD+ +RD+ DRD+G DRD+ +RD+G RD+G
Sbjct: 834 DRDRSGRSDRDRDRDRDRDRDRDRDRDRGNDRDRDRDRDRDRDRG----RDRG 882
Score = 98 (39.6 bits), Expect = 0.0010, P = 0.00099
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 5 RKREKSMPGADRNKG-PRADRDKGPG-ANRDKGPRADRDKGPKADRDKGPRANRDKGPRA 62
R R++ DR++G R + D+G G +RD+ R+DRD+ DRD+ +RD+G
Sbjct: 807 RDRDRDRD-RDRDRGRDRGNGDRGEGDRDRDRSGRSDRDRDRDRDRDRDRDRDRDRGNDR 865
Query: 63 NRDK 66
+RD+
Sbjct: 866 DRDR 869
>DICTYBASE|DDB_G0288797 [details] [associations]
symbol:fip1l1 "cleavage and polyadenylation
specificity factor FIP1" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0006379 "mRNA cleavage"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] dictyBase:DDB_G0288797 GO:GO:0006378
GenomeReviews:CM000154_GR EMBL:AAFI02000125 GO:GO:0005847
GO:GO:0006379 eggNOG:COG5213 InterPro:IPR007854 Pfam:PF05182
RefSeq:XP_636526.1 EnsemblProtists:DDB0233703 GeneID:8626811
KEGG:ddi:DDB_G0288797 InParanoid:Q54IF1 OMA:AYCERQN Uniprot:Q54IF1
Length = 560
Score = 101 (40.6 bits), Expect = 0.00019, P = 0.00019
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 5 RKREKSMPGADRNKGPRADRDKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANR 64
R+RE+ DR++ R+DRD+ + R++ R++R++ +DRD+ R D+ R++R
Sbjct: 395 RERERDRDDRDRSERERSDRDR---SERERSDRSERER---SDRDRSERERSDRSERSDR 448
Query: 65 DK 66
DK
Sbjct: 449 DK 450
>UNIPROTKB|B4NIC3 [details] [associations]
symbol:eIF3-S10 "Eukaryotic translation initiation factor 3
subunit A" species:7260 "Drosophila willistoni" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0006446
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003743 EMBL:CH964272
GO:GO:0005852 KO:K03254 HAMAP:MF_03000 OMA:DNWRSES eggNOG:NOG123880
OrthoDB:EOG4905QZ RefSeq:XP_002072719.1 STRING:B4NIC3
EnsemblMetazoa:FBtr0244404 GeneID:6650110 KEGG:dwi:Dwil_GK13753
FlyBase:FBgn0215761 InParanoid:B4NIC3 Uniprot:B4NIC3
Length = 1140
Score = 103 (41.3 bits), Expect = 0.00027, P = 0.00027
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 16 RNKGPRADR-DKGPGANRDKGPRADRDKGPKADRDKGPRANRDKGPRANRDK 66
R P ADR D+ GA+RD+G ADRD+G ADRD+G A+R++G A+RD+
Sbjct: 918 RRPAPTADRADRDRGADRDRG--ADRDRG--ADRDRG--ADRERG--ADRDR 961
>ZFIN|ZDB-GENE-030131-5726 [details] [associations]
symbol:eif3s10 "eukaryotic translation initiation
factor 3, subunit 10 (theta)" species:7955 "Danio rerio"
[GO:0001732 "formation of translation initiation complex"
evidence=ISS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISS] [GO:0003743 "translation initiation factor
activity" evidence=IEA;ISS] [GO:0006413 "translational initiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-5726 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000246822 KO:K03254 HAMAP:MF_03000
GeneTree:ENSGT00690000102108 EMBL:BC059196 EMBL:BC066670
IPI:IPI00489212 RefSeq:NP_956114.2 UniGene:Dr.132282
ProteinModelPortal:Q6PCR7 STRING:Q6PCR7 PRIDE:Q6PCR7
Ensembl:ENSDART00000111462 GeneID:327515 KEGG:dre:327515 CTD:327515
eggNOG:NOG123880 HOVERGEN:HBG006128 InParanoid:Q6PCR7
NextBio:20810067 Bgee:Q6PCR7 GO:GO:0001732 Uniprot:Q6PCR7
Length = 1267
Score = 103 (41.3 bits), Expect = 0.00030, P = 0.00030
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 13 GADRNKGPRA--DRDKGPG-ANRDKGPRA--DRDKGPKA--DRDKGPR--ANRDKGPRAN 63
G D ++GPR D D+GP ++ D+GPR D D+GP+ D +GPR A+ D GPR
Sbjct: 1003 GMDDDRGPRRPIDDDRGPRRSDDDRGPRRGFDDDRGPRRGMDEPRGPRRGADDDWGPRRG 1062
Query: 64 RDKGPG 69
D G
Sbjct: 1063 GDDERG 1068
Score = 99 (39.9 bits), Expect = 0.00081, P = 0.00081
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 13 GADRNKGPRADRDKGPGANR---DKGPRA--DRDKGPKA--DRDKGPR-ANRDKGPRA-- 62
G D ++G R D G R D+GPR D D+GP+ D D+GPR ++ D+GPR
Sbjct: 974 GFDDDRGTRRGFDDDRGQRRGDDDRGPRRGMDDDRGPRRPIDDDRGPRRSDDDRGPRRGF 1033
Query: 63 NRDKGP 68
+ D+GP
Sbjct: 1034 DDDRGP 1039
>UNIPROTKB|E1BSS3 [details] [associations]
symbol:EIF3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001732 "formation of translation initiation complex"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005730
GO:GO:0003743 GO:GO:0005852 OMA:QDRDEND
GeneTree:ENSGT00690000102108 GO:GO:0001732 EMBL:AADN02030976
EMBL:AADN02030975 IPI:IPI00594883 Ensembl:ENSGALT00000015192
Uniprot:E1BSS3
Length = 1365
Score = 102 (41.0 bits), Expect = 0.00042, P = 0.00042
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 15 DRNKGPRADRDKGP--GANRDKGPRA--DRDKGP--KADRDKGPRANRDKGP-RANRDKG 67
DR AD D+GP G + D+GPR D D+GP D D+ R + D+GP R++ D
Sbjct: 1096 DRGSWRAADDDRGPRRGLDDDRGPRRGLDDDRGPWRNTDDDRLSRRDDDRGPWRSSEDSR 1155
Query: 68 PG 69
PG
Sbjct: 1156 PG 1157
>FB|FBgn0037249 [details] [associations]
symbol:eIF3-S10 "eIF3-S10" species:7227 "Drosophila
melanogaster" [GO:0006413 "translational initiation" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] InterPro:IPR000717 Pfam:PF01399
EMBL:AE014297 GO:GO:0005829 GO:GO:0006446 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 GO:GO:0000022 GO:GO:0005852
eggNOG:NOG236708 KO:K03254 OMA:QDRDEND HAMAP:MF_03000
GeneTree:ENSGT00690000102108 OrthoDB:EOG4905QZ EMBL:AY071601
EMBL:BT001505 EMBL:BT023783 RefSeq:NP_649470.2 UniGene:Dm.5844
ProteinModelPortal:Q9VN25 IntAct:Q9VN25 MINT:MINT-756970
STRING:Q9VN25 PaxDb:Q9VN25 PRIDE:Q9VN25 EnsemblMetazoa:FBtr0078944
GeneID:40563 KEGG:dme:Dmel_CG9805 UCSC:CG9805-RA CTD:40563
FlyBase:FBgn0037249 InParanoid:Q9VN25 PhylomeDB:Q9VN25
ChiTaRS:eIF3-S10 GenomeRNAi:40563 NextBio:819403 Bgee:Q9VN25
Uniprot:Q9VN25
Length = 1140
Score = 101 (40.6 bits), Expect = 0.00044, P = 0.00044
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 5 RKREKSMPGADRNKG-PRADRDKGP-GANRDKGPRADRDKGPKADRDKGPRANRDKGPRA 62
R+ + A ++ G P++ DK G RD+ R D G + DRD GPR +RD GPR
Sbjct: 972 REPDSQRAAAPKDSGAPQSRDDKWRRGGERDRDFRID---GARRDRDDGPRRDRDDGPRR 1028
Query: 63 NRDKGPG 69
+RD G
Sbjct: 1029 DRDDERG 1035
>UNIPROTKB|B4PTS9 [details] [associations]
symbol:eIF3-S10 "Eukaryotic translation initiation factor 3
subunit A" species:7245 "Drosophila yakuba" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0006446
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003743 EMBL:CM000160
GO:GO:0005852 KO:K03254 HAMAP:MF_03000 eggNOG:NOG123880
OrthoDB:EOG4905QZ RefSeq:XP_002095950.1 STRING:B4PTS9
EnsemblMetazoa:FBtr0271868 GeneID:6535294 KEGG:dya:Dyak_GE25350
FlyBase:FBgn0242428 Uniprot:B4PTS9
Length = 1137
Score = 99 (39.9 bits), Expect = 0.00072, P = 0.00072
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 7 REKSMPGADRNKGPRADRDKGPGANRD----KGPRADRD---KGPKADRDKGPRANRDKG 59
R + P + R P+ D G +RD +G DRD G + DRD GPR +RD G
Sbjct: 964 RVRREPDSQRAAAPK---DSGAPQSRDEKWRRGGERDRDFRNDGARRDRDDGPRRDRDDG 1020
Query: 60 PRANRD 65
PR +RD
Sbjct: 1021 PRRDRD 1026
Score = 98 (39.6 bits), Expect = 0.00092, P = 0.00092
Identities = 21/43 (48%), Positives = 24/43 (55%)
Query: 16 RNKGPRADRDKGPGANRDKGPRADRDKGPKA-DRDKGPRANRD 57
RN G R DRD GP +RD GPR DRD R+ GPR +
Sbjct: 1001 RNDGARRDRDDGPRRDRDDGPRRDRDDERSGFRRNDGPRRTEE 1043
>UNIPROTKB|B4I3P3 [details] [associations]
symbol:eIF3-S10 "Eukaryotic translation initiation factor 3
subunit A" species:7238 "Drosophila sechellia" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 GO:GO:0006446 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 GO:GO:0005852 EMBL:CH480821
KO:K03254 HAMAP:MF_03000 OrthoDB:EOG4905QZ RefSeq:XP_002038299.1
GeneID:6613830 KEGG:dse:Dsec_GM10701 FlyBase:FBgn0165647
Uniprot:B4I3P3
Length = 1141
Score = 99 (39.9 bits), Expect = 0.00072, P = 0.00072
Identities = 27/70 (38%), Positives = 34/70 (48%)
Query: 7 REKSMPGADRNKGPRADRDKGPGANRD----KGPRADRD---KGPKADRDKGPRANRDKG 59
R + P R P+ D G +RD +G DRD G + DRD GPR +RD G
Sbjct: 969 RVRREPDTQRAAAPK---DSGAPQSRDDKWRRGGERDRDFRNDGARRDRDDGPRRDRDDG 1025
Query: 60 PRANRDKGPG 69
PR +RD G
Sbjct: 1026 PRRDRDDERG 1035
>UNIPROTKB|B4QVI2 [details] [associations]
symbol:eIF3-S10 "Eukaryotic translation initiation factor 3
subunit A" species:7240 "Drosophila simulans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 GO:GO:0006446 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003743 EMBL:CM000364 GO:GO:0005852
KO:K03254 HAMAP:MF_03000 OrthoDB:EOG4905QZ RefSeq:XP_002102104.1
UniGene:Dsi.2707 EnsemblMetazoa:FBtr0219588 GeneID:6726693
KEGG:dsi:Dsim_GD19678 FlyBase:FBgn0191169 Uniprot:B4QVI2
Length = 1141
Score = 99 (39.9 bits), Expect = 0.00072, P = 0.00072
Identities = 27/70 (38%), Positives = 34/70 (48%)
Query: 7 REKSMPGADRNKGPRADRDKGPGANRD----KGPRADRD---KGPKADRDKGPRANRDKG 59
R + P R P+ D G +RD +G DRD G + DRD GPR +RD G
Sbjct: 969 RVRREPDTQRAAAPK---DSGAPQSRDDKWRRGGERDRDFRNDGARRDRDDGPRRDRDDG 1025
Query: 60 PRANRDKGPG 69
PR +RD G
Sbjct: 1026 PRRDRDDERG 1035
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.133 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 71 71 0.00091 102 3 11 23 0.47 29
29 0.42 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 308 (33 KB)
Total size of DFA: 60 KB (2060 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.75u 0.08s 9.83t Elapsed: 00:00:06
Total cpu time: 9.75u 0.08s 9.83t Elapsed: 00:00:06
Start: Thu Aug 15 11:03:19 2013 End: Thu Aug 15 11:03:25 2013